BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003880
(789 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255538898|ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1113
Score = 1386 bits (3588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/800 (83%), Positives = 725/800 (90%), Gaps = 11/800 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYPLVV D IEEEPVVIDGVKIPVD S+PNPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDAIEEEPVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PT+F+EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTSFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KD ++AAEEERLRQEFEREGRKLPPK SQVFDSN+ITPGTEFMAVLSIALQYYIHL
Sbjct: 121 AAKDREEAAAEEERLRQEFEREGRKLPPKESSQVFDSNIITPGTEFMAVLSIALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+K+KVILSDANVPGEGEHK+MSY+RLQRNLPGYDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE+HFSILRE+VFTPGQQDKCFLCGQ GHLAA+CEGKAKRKAGEFDEKGDE V KK
Sbjct: 241 LATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAVAKK 300
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+ E RIPNPPF+ID ECIVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLL+AVYKKEF A+GGYLTDG KP+L +VEHFIQAVGSYED+IFQKRARLHQR +ERIK
Sbjct: 361 INLLLAVYKKEFTAMGGYLTDGCKPNLSKVEHFIQAVGSYEDKIFQKRARLHQRQSERIK 420
Query: 421 REKAQ--ARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD------- 471
REKAQ +RRGDD +P QP+SLVPV+RFHGSRLAS PSPSP+Q S LD
Sbjct: 421 REKAQSRSRRGDDAQPQVQPESLVPVARFHGSRLASAPSPSPFQHSLEAADLDVRSAHFS 480
Query: 472 --NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 529
+GKG+S + HKV RLSS A++GAAIVEAENS E + ENK+E KAKLKE+LR+KSDAF
Sbjct: 481 ALDGKGSSVQAHKVARLSSSASVGAAIVEAENSLEIEVHENKDELKAKLKEILREKSDAF 540
Query: 530 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 589
NS NPEEDK++LG+PGWKERYYEEKF+ KTPEE E+ R+DVVLRYTEGLCWVMHYYYEGV
Sbjct: 541 NSKNPEEDKIRLGDPGWKERYYEEKFSGKTPEELEDIRRDVVLRYTEGLCWVMHYYYEGV 600
Query: 590 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 649
CSWQWFYPYHYAPFASDLK L Q +I FELG PFKPFNQLLGVFP+ASSHALP HYRKLM
Sbjct: 601 CSWQWFYPYHYAPFASDLKHLGQLDIKFELGSPFKPFNQLLGVFPAASSHALPVHYRKLM 660
Query: 650 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
+DPNSPI DFYPTDFEVDMNGKRY+WQGIAKLPFIDE RLL EVKKIEHTLTEEEARRNS
Sbjct: 661 SDPNSPIIDFYPTDFEVDMNGKRYAWQGIAKLPFIDEVRLLAEVKKIEHTLTEEEARRNS 720
Query: 710 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH 769
M DMLFVL SH L+ SIY LD +CKQL +ERVEVKER+NPELSDGMNGYISPC+GD H
Sbjct: 721 AMFDMLFVLSSHSLAESIYLLDNNCKQLTDRERVEVKERINPELSDGMNGYISPCSGDTH 780
Query: 770 PPVFRSPVASMEDIMGNQVL 789
PP+FRSPVA MEDI+ N V+
Sbjct: 781 PPIFRSPVAGMEDILDNGVI 800
>gi|224082986|ref|XP_002306919.1| predicted protein [Populus trichocarpa]
gi|222856368|gb|EEE93915.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 1367 bits (3537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/789 (85%), Positives = 720/789 (91%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYPLVV DVIEEEPVVI+GVKIPVDTSKPNPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIEGVKIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PT+F EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTSFGEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDA+D+AAEEERLR+EFEREGRKLPPK SQ FDSNVITPGTEFMAVLSIALQYYIHL
Sbjct: 121 AAKDASDAAAEEERLREEFEREGRKLPPKETSQTFDSNVITPGTEFMAVLSIALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW+KIKV+LSDANVPGEGEHK+MSY+RLQRNLPGYDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKKIKVVLSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILRE+VFTPGQQDKCF+CGQ GHLAA CEGKAKRKAGEFDEKG++V VPKK
Sbjct: 241 LATHEVHFSILREIVFTPGQQDKCFICGQAGHLAAACEGKAKRKAGEFDEKGNDVAVPKK 300
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFRIPNPPFEIDLE VDDFIF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLNIWTLREYLEYEFRIPNPPFEIDLERTVDDFIFICFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEFR LGGYLTDGSKP+L RVEHFIQAVG+YED+IFQKRARLHQR AERIK
Sbjct: 361 INLLMAVYKKEFRVLGGYLTDGSKPNLSRVEHFIQAVGAYEDKIFQKRARLHQRQAERIK 420
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REK QARRGDDV+P QP+SLV V++F GSRLAS P+PSPYQ + +GKG+S +
Sbjct: 421 REKTQARRGDDVQPQHQPESLVAVTQFRGSRLASAPTPSPYQDDGTHSQTSDGKGSSVQS 480
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
KV RLSS A IGAAIVEAEN E + ENKEE K KLKE LR+KSD FNS N EEDKVK
Sbjct: 481 RKVARLSSTANIGAAIVEAENCLEIEAHENKEELKTKLKESLREKSDVFNSKNHEEDKVK 540
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
LGEPGWKERYYEEKF+AK+ +E E R+DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY
Sbjct: 541 LGEPGWKERYYEEKFSAKSLDEMEAVRRDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
Query: 601 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
APFASDL DL Q NISFELG PFKPFNQLLGVFP+ASSHALP HYRKLMTDPNSPI DFY
Sbjct: 601 APFASDLTDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPVHYRKLMTDPNSPIFDFY 660
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLS 720
PTDFEVDMNGKR++WQGIAKLPFIDEARLL EV+KIEHTLTEEEARRNS+M DMLFV S
Sbjct: 661 PTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEARRNSMMFDMLFVSSS 720
Query: 721 HPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASM 780
HPLS SIY LD HCKQL KERVEVKER+NPELSDGMNGY+SPCAGD HPP+FRSPV M
Sbjct: 721 HPLSESIYLLDNHCKQLTDKERVEVKERINPELSDGMNGYLSPCAGDTHPPIFRSPVVGM 780
Query: 781 EDIMGNQVL 789
EDI+ N+V+
Sbjct: 781 EDILANEVI 789
>gi|302142638|emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 1348 bits (3489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/789 (83%), Positives = 711/789 (90%), Gaps = 2/789 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYPLVV DVIEEEPV IDG+ IPVDTSKPNPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFE+EGRKLPPK SQV DSNVITPGTEFM VLS+ALQYYIHL
Sbjct: 121 AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILRE+VFTPGQQDKCF+CGQ GHLAA+CEGKAKRKAGEFDEKG V KK
Sbjct: 241 LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YE RIPN PFEID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKE RA+GGYLTD SKP+L VEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 361 INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQARRGDD +P +P+ LVPVSR+HGSRLAS P+PSPYQQ E + G+ GR
Sbjct: 421 REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHEIKSKQSGTSGSQGR- 479
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
KV R SSGAT+GAAIVEAEN ET+ +NK+E KAKLKELLR+KSD FNS NPEEDKVK
Sbjct: 480 -KVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLFNSKNPEEDKVK 538
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
LGE GWKERYYEEKF+ KTPEE+E R DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYHY
Sbjct: 539 LGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHY 598
Query: 601 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
APFASDLKDL Q NISFELG PFKPFNQLLGVFP+ASSHALPE YRKLMTDPNSPI DFY
Sbjct: 599 APFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMTDPNSPIIDFY 658
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLS 720
PTDFEVDMNGKR++WQGIAKLPFIDEARLL EV+KIEHTLTEEE RRNS+M DMLFV LS
Sbjct: 659 PTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFDMLFVALS 718
Query: 721 HPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASM 780
HPLS I++LD+ CK+L ER EVKE+L+P S GMNGYIS C GDP PP+FRSP+AS+
Sbjct: 719 HPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPCPPIFRSPIASL 778
Query: 781 EDIMGNQVL 789
EDIM NQV+
Sbjct: 779 EDIMDNQVI 787
>gi|359492219|ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 1345 bits (3481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/789 (83%), Positives = 711/789 (90%), Gaps = 2/789 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYPLVV DVIEEEPV IDG+ IPVDTSKPNPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFE+EGRKLPPK SQV DSNVITPGTEFM VLS+ALQYYIHL
Sbjct: 121 AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILRE+VFTPGQQDKCF+CGQ GHLAA+CEGKAKRKAGEFDEKG V KK
Sbjct: 241 LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YE RIPN PFEID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKE RA+GGYLTD SKP+L VEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 361 INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQARRGDD +P +P+ LVPVSR+HGSRLAS P+PSPYQQ E + G+ GR
Sbjct: 421 REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHEIKSKQSGTSGSQGR- 479
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
KV R SSGAT+GAAIVEAEN ET+ +NK+E KAKLKELLR+KSD FNS NPEEDKVK
Sbjct: 480 -KVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLFNSKNPEEDKVK 538
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
LGE GWKERYYEEKF+ KTPEE+E R DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYHY
Sbjct: 539 LGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHY 598
Query: 601 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
APFASDLKDL Q NISFELG PFKPFNQLLGVFP+ASSHALPE YRKLMTDPNSPI DFY
Sbjct: 599 APFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMTDPNSPIIDFY 658
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLS 720
PTDFEVDMNGKR++WQGIAKLPFIDEARLL EV+KIEHTLTEEE RRNS+M DMLFV LS
Sbjct: 659 PTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFDMLFVALS 718
Query: 721 HPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASM 780
HPLS I++LD+ CK+L ER EVKE+L+P S GMNGYIS C GDP PP+FRSP+AS+
Sbjct: 719 HPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPCPPIFRSPIASL 778
Query: 781 EDIMGNQVL 789
EDIM NQV+
Sbjct: 779 EDIMDNQVI 787
>gi|449452066|ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 1323 bits (3423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/805 (80%), Positives = 714/805 (88%), Gaps = 19/805 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYPLVV DVIEEEPVVIDG+ IPVDTSKPNPN LE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFSEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDA D+AAEE RLR+EFE+EGRKLPPK +SQVFDSNVITPGT+FMAVLSIALQYY+H+
Sbjct: 121 AAKDAIDAAAEETRLREEFEKEGRKLPPKEESQVFDSNVITPGTDFMAVLSIALQYYVHI 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILRE+VFTPGQQ+KCFLCGQ GH AA+CEGKAKRK+GEFDEK +EV + KK
Sbjct: 241 LATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDEKVEEVTI-KK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFLHIWTLREYL+YE RIPNPPF ID+E IVDDF+FMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLL+AVYKKEFRALGGYLTDGSKP+L+RVEHFIQAVGSYED+IFQKRARLHQ+ A+RIK
Sbjct: 360 INLLLAVYKKEFRALGGYLTDGSKPNLQRVEHFIQAVGSYEDKIFQKRARLHQKQADRIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL---------- 470
REK Q RRGDD EP QP SLV V+RFH SRLASGP PSPY++S VG+
Sbjct: 420 REKGQTRRGDDAEPQVQP-SLVAVARFHESRLASGPCPSPYERS-GVGKATSRFSGMNIK 477
Query: 471 ------DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 524
+G GTS R +KV RLSSGA+IGAAIVEAENS E D +NK+E K+KLKE+LR+
Sbjct: 478 NKQSLESHGSGTSVRQNKVARLSSGASIGAAIVEAENSLEIDIDDNKKELKSKLKEVLRE 537
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
KSD FNS+ EEDK+KLG PGW+ERYY EKF+A TPEE ++ R DVVLRYTEGLCWVMHY
Sbjct: 538 KSDVFNSNKSEEDKIKLGVPGWRERYYNEKFSANTPEELDDIRNDVVLRYTEGLCWVMHY 597
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YYEGVCSWQWFYPYHYAPFASDLK L + NISF LG PFKPFNQLLGVFP+AS+HALPE
Sbjct: 598 YYEGVCSWQWFYPYHYAPFASDLKGLGELNISFNLGTPFKPFNQLLGVFPAASAHALPEQ 657
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
YRKLMTD NSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDE RLL EV K+EHTLTEEE
Sbjct: 658 YRKLMTDQNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEE 717
Query: 705 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 764
ARRNSIM DMLFV SHPLS SIY+LD CKQL ++R EVKE++NPE S+GMNGY+SPC
Sbjct: 718 ARRNSIMFDMLFVTSSHPLSVSIYSLDNRCKQLAERDRTEVKEKINPEHSEGMNGYLSPC 777
Query: 765 AGDPHPPVFRSPVASMEDIMGNQVL 789
G+ PP+FRSPV +EDI+ NQV+
Sbjct: 778 LGELCPPIFRSPVEGLEDIIDNQVI 802
>gi|356562399|ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1065
Score = 1310 bits (3389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/796 (80%), Positives = 701/796 (88%), Gaps = 10/796 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+V+ D IEEE VVIDGV+IPVDTS NPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEAVVIDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PT+FDEVF+CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTSFDEVFECMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEE RLR+EFE+EGRKLPPK +SQ FDSNVITPGTEFMAVLSIALQYY+HL
Sbjct: 121 AAKDAADAAAEETRLREEFEKEGRKLPPKGESQTFDSNVITPGTEFMAVLSIALQYYVHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNL GYDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE+HFSILREVVFTPG QDKCFLCGQ GH+AANCEGKAKRKAGEFDEKG E +V KK
Sbjct: 241 LATHEIHFSILREVVFTPG-QDKCFLCGQMGHMAANCEGKAKRKAGEFDEKG-EAIVAKK 298
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
P+QFL+IWTLREYL+YE RIPNPPFEID ECIVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 299 PFQFLNIWTLREYLEYEMRIPNPPFEIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 358
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLL+AVYKKEFR GGYLT+GS +L +VEHFIQAVGSYED+IFQKRARLHQR ERIK
Sbjct: 359 INLLIAVYKKEFREFGGYLTNGSTINLSKVEHFIQAVGSYEDKIFQKRARLHQRQTERIK 418
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ-------QSECVGRLDNG 473
REKAQARRGDD EP +P+SLV VSRFHGSRLAS P+PSP+Q Q R DN
Sbjct: 419 REKAQARRGDDAEPQFKPESLVAVSRFHGSRLASAPNPSPFQPSGHYNSQVSASVRKDN- 477
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
K RP+KV R+SSGAT+ AAIVEAEN+ E D Q+NK+E K KLKE+LR+KSD FNS N
Sbjct: 478 KEAFERPYKVARVSSGATVAAAIVEAENNLEIDAQDNKDELKTKLKEILREKSDVFNSKN 537
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
EEDK+KLGEPGWKERYY+EKF+AKTPEE E RKDVVL+YTEGLCWVMHYYYEGVCSW
Sbjct: 538 AEEDKIKLGEPGWKERYYDEKFSAKTPEELEAIRKDVVLKYTEGLCWVMHYYYEGVCSWN 597
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK L + +ISF+LG PFKP++QLLGVFP+ASSHALPE YR+LMTDP+
Sbjct: 598 WFYPYHYAPFASDLKGLGELDISFKLGTPFKPYDQLLGVFPAASSHALPEPYRRLMTDPS 657
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI DFYP DFEVDMNGKR++WQGIAKLPFIDE RLL EV+KIE+ LT EE RRN+IM D
Sbjct: 658 SPIIDFYPVDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIENLLTPEEKRRNAIMFD 717
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
+LFV HPLSA I TLD CK + ER VKE++NP+ S GMNGYIS C G+P PP+F
Sbjct: 718 LLFVNSCHPLSACISTLDNKCKNMPNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIF 777
Query: 774 RSPVASMEDIMGNQVL 789
RSPVASMEDIM N V+
Sbjct: 778 RSPVASMEDIMDNHVI 793
>gi|356553393|ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1075
Score = 1300 bits (3365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/796 (79%), Positives = 699/796 (87%), Gaps = 10/796 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+V+ D IEEEPVVIDGV+IPVDTSK NPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEPVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PT+FDEVF+CMFDYIDRLF+MVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTSFDEVFECMFDYIDRLFIMVRPRELLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEE RLR+EFE+EGRKLP K +SQ FDSNVITPGTEFMAVLSIALQYY+HL
Sbjct: 121 AAKDAADAAAEEARLREEFEKEGRKLPSKGESQTFDSNVITPGTEFMAVLSIALQYYVHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNL GYDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE+HFSILRE+VFTPG QDKCFLCGQ GH+AANCEGKAKRKAGEFDEKG E +V KK
Sbjct: 241 LATHEIHFSILREIVFTPG-QDKCFLCGQMGHMAANCEGKAKRKAGEFDEKG-EAIVTKK 298
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
P+QFL+IWTLREYL+YE RI NPP EID +CIVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 299 PFQFLNIWTLREYLEYEMRISNPPSEIDFDCIVDDFIFMCFFVGNDFLPHMPTLEIREGA 358
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLL+AVYKKEFR GGYLT+GS +L RVEHFIQAVGSYED+IFQKRARLHQR ERIK
Sbjct: 359 INLLIAVYKKEFREFGGYLTNGSTINLSRVEHFIQAVGSYEDKIFQKRARLHQRQTERIK 418
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ-------QSECVGRLDNG 473
REKAQARRGDD EP QP+SLV VSRFHGSRLAS P+P P+Q Q+ R DN
Sbjct: 419 REKAQARRGDDAEPQFQPESLVAVSRFHGSRLASAPTPPPFQPSGHYNSQASASVRKDN- 477
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
K RP KV R+SSGAT+ AAIVEAEN+ E D Q+NK+E K KLKE+LR+KSD FNS N
Sbjct: 478 KEAFERPLKVSRVSSGATVAAAIVEAENNLEIDAQDNKDELKTKLKEILREKSDVFNSKN 537
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
EEDK+KLGEPGWKERYYEEKF+AKTPEE E RKDVVL+YTEGLCWVMHYYYEGVCSW
Sbjct: 538 AEEDKIKLGEPGWKERYYEEKFSAKTPEELEAIRKDVVLKYTEGLCWVMHYYYEGVCSWN 597
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK L + +ISF+LG PFKPF+QLLGVFP+ASSHALPE YR+LMTDPN
Sbjct: 598 WFYPYHYAPFASDLKGLGELDISFKLGTPFKPFDQLLGVFPAASSHALPEPYRRLMTDPN 657
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI DFYP DFEVDMNGKR++WQGIAKLPFIDE RLL EV+KIE+ LT +E RRN+IM D
Sbjct: 658 SPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIENLLTPDEKRRNAIMFD 717
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
++FV HPLSA I TLD CK + ER VKE++NP+ S GMNGYIS C G+P PP+F
Sbjct: 718 LIFVNSCHPLSACISTLDNKCKNMPNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIF 777
Query: 774 RSPVASMEDIMGNQVL 789
RSP+ASMEDIM N V+
Sbjct: 778 RSPIASMEDIMDNHVI 793
>gi|224065931|ref|XP_002301985.1| predicted protein [Populus trichocarpa]
gi|222843711|gb|EEE81258.1| predicted protein [Populus trichocarpa]
Length = 851
Score = 1284 bits (3323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/791 (82%), Positives = 700/791 (88%), Gaps = 13/791 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYPLVV DVIEEEPVVI+GVKIPVDTS+PNPN +EYDNLYLDMNGI+H
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIEGVKIPVDTSRPNPNNIEYDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI-DGVAPRAKMNQQRSRRF 119
PCFHPEDRP+PT+FDEVFQCMFDYIDRLFV+VRPRKLLYMAI + +MNQQRSRRF
Sbjct: 61 PCFHPEDRPSPTSFDEVFQCMFDYIDRLFVVVRPRKLLYMAIGEWSCTSYEMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFEREGRKLPPK SQ FDSNVITPGTEFMAVL
Sbjct: 121 RAAKDAADAAAEEERLREEFEREGRKLPPKESSQTFDSNVITPGTEFMAVL--------- 171
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LN DPGW+KIK ILSDANVPGEGEHKIMSY+RLQ NLPGY+PNTRHCLYGLDADLIML
Sbjct: 172 --LNYDPGWKKIKAILSDANVPGEGEHKIMSYIRLQSNLPGYNPNTRHCLYGLDADLIML 229
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHEV FSILRE+VFTPGQQDKCFLCGQ GHLAA+CEGKAKRKAGEFDEKG++V VPK
Sbjct: 230 SLATHEVLFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGNDVAVPK 289
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KPYQFL+IW LREYL+YEFRIPNPPFEIDLE IVDDFIF+CFFVGNDFLPHMPTLEIREG
Sbjct: 290 KPYQFLNIWILREYLEYEFRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREG 349
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLMAVYKKEFR L GYLTDGSKP+L RVEHFIQAVGSYED+IFQKRARLHQR AERI
Sbjct: 350 AINLLMAVYKKEFRVLDGYLTDGSKPNLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERI 409
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
KREKAQARRGDD EP QP+SLV V+RFHGSRLAS P+PSPYQ + +GK +S R
Sbjct: 410 KREKAQARRGDDAEPQNQPESLVAVARFHGSRLASAPTPSPYQDDGTHSQTSDGKRSSVR 469
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
HKV RLSS A IGAAIVEAENS E + EN+EE K KLKELLR+KSD FNS N EDKV
Sbjct: 470 RHKVARLSSTANIGAAIVEAENSLEIEVHENQEELKTKLKELLREKSDVFNSKNHGEDKV 529
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDV-VLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
KLGEPGWKERYYE+KF+AKT EE E+ R+DV VLRYTEGLCWVMHYYYEGVCSWQWFYPY
Sbjct: 530 KLGEPGWKERYYEQKFSAKTLEEMEDIRRDVKVLRYTEGLCWVMHYYYEGVCSWQWFYPY 589
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFASDLKDL Q +ISFELG PFKPFNQLLGVFP+ASSHALP HYRKLMTDP+SP D
Sbjct: 590 HYAPFASDLKDLGQLDISFELGSPFKPFNQLLGVFPAASSHALPVHYRKLMTDPSSPFID 649
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYPTDFEVDMNGKRY+WQGIAKLP IDE+RLL EV+KIEHTLTEEEARRNS+M DM FV
Sbjct: 650 FYPTDFEVDMNGKRYAWQGIAKLPLIDESRLLAEVQKIEHTLTEEEARRNSMMFDMHFVS 709
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVA 778
SH LS SI LD HCKQL KER EVKER+NPELSDGMNGY+SPCAGD HPP+FRSPV
Sbjct: 710 SSHSLSESINLLDNHCKQLTDKERAEVKERINPELSDGMNGYLSPCAGDTHPPIFRSPVV 769
Query: 779 SMEDIMGNQVL 789
SMEDI+ N+V+
Sbjct: 770 SMEDILANEVI 780
>gi|242056911|ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
gi|241929576|gb|EES02721.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
Length = 1066
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/790 (80%), Positives = 699/790 (88%), Gaps = 5/790 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEEPV I+GVK+PVDTSKPNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVLS+ALQYYIHL
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW++IKVILSDANVPGEGEHKIMSY+R QRNL G++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGKAKRKAGEFDEKGD +VPKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEFDEKGD-AIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
R+KAQA+RGDD++P + D +VPV RF GSRLASG P PYQQ+ G N K + R
Sbjct: 420 RDKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPVPYQQN---GSHRNNKERNSRA 476
Query: 481 HKVPRLS-SGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
KV R+S SG++I AAIVEAEN E +ENKEE K+ LK+ LR+KSD FNSDNP+EDKV
Sbjct: 477 PKVARVSTSGSSISAAIVEAENDLEAQERENKEELKSMLKDALREKSDIFNSDNPDEDKV 536
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW+ERYYEEKF A+TPE+ EE R+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 537 KLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYH 596
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL L Q NI FELG PFKPF+QL+GVFP+AS+HALP YR+LMTDP+SPI DF
Sbjct: 597 YAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAASAHALPLQYRQLMTDPHSPIIDF 656
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNSIM DMLFV
Sbjct: 657 YPIDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFDMLFVNG 716
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
SHPLS IY+L+ L K+R E+KE+L+P S GMNGYI+ C+GDP PP+FRSPV
Sbjct: 717 SHPLSPYIYSLNSKFGHLPDKKRNEIKEKLDPSASGGMNGYITLCSGDPCPPIFRSPVDG 776
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 777 LEDIMDNQVI 786
>gi|414876883|tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 1066
Score = 1235 bits (3195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/790 (79%), Positives = 692/790 (87%), Gaps = 5/790 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEEPV I+GVK+PVDTSKPNPN LE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVLS+ALQYYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIHR 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW++IKVILSDANVPGEGEHKIMSY+R QRNL G++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDEKG +VPKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGG-AIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VP+ RF GSRLASG P PY+Q+ G + K + R
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPIQRFQGSRLASGAVPVPYEQN---GSHKDNKERNSRA 476
Query: 481 HKVPRLS-SGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K R+S SG++I +A+VEAEN E ENKEE K+ LK+ LR+KSD FNSDNPEEDKV
Sbjct: 477 RKAARVSTSGSSIASALVEAENDLEAQECENKEELKSMLKDALREKSDIFNSDNPEEDKV 536
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW+ERYYEEKF A+TPE+ EE R+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 537 KLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYH 596
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL L Q NI FELG PFKPF+QL+GVFP+AS+HALP YR+LMTDPNSPI DF
Sbjct: 597 YAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAASAHALPLQYRRLMTDPNSPIIDF 656
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YPTDFEVDMNGKRYSWQGIAKLPFIDE RLL E+KK+EHTLT EEARRNSIM DMLFV
Sbjct: 657 YPTDFEVDMNGKRYSWQGIAKLPFIDEDRLLAEIKKVEHTLTPEEARRNSIMCDMLFVNG 716
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
SHPLS IY+L+ L K R E+KE+L+P S GMNGYI+ C+GDP PP+FRSPV
Sbjct: 717 SHPLSPYIYSLNSKFGHLPDKRRNEIKEKLDPSASGGMNGYITLCSGDPCPPIFRSPVDG 776
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 777 LEDIMDNQVI 786
>gi|125528546|gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 1229 bits (3181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/790 (79%), Positives = 698/790 (88%), Gaps = 5/790 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEE V I+GVK+PVDTSKPNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVLSIALQYYIHL
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW+++KVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDEKG E +VPKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKG-EAIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+ NPPF ID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L +VEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VPV+RF GSRLASGP+PSPY+Q+ G N G + R
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPAPSPYEQN---GSDKNNGGKNSRA 476
Query: 481 HKVPRL-SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K R+ SSG++I AAIVEAEN E +ENKE+ K LK+ LR+KSD FNS+NPEEDK+
Sbjct: 477 RKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFNSENPEEDKI 536
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW+ERYYEEKF A+TP + EE R+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 537 KLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYH 596
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL L Q NI+FELG PFKPF+QL+GVFP+ASSHALP YR+LMTD NSPI DF
Sbjct: 597 YAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDF 656
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YPTDFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNSIM +MLFV
Sbjct: 657 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNG 716
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
SHPLS IY+L+ L +ER E+KE+++P S GMNGYIS C+GDP PPVFRSPV
Sbjct: 717 SHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDG 776
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 777 LEDIMDNQVI 786
>gi|18410905|ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein
EXORIBONUCLEASE 3
gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana]
gi|332197621|gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
Length = 1020
Score = 1229 bits (3180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/791 (78%), Positives = 693/791 (87%), Gaps = 12/791 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWLAEKYPL+VADVIEEEPV I+G+KIPVDTSKPNPN LEYDNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF+EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++KDA+D+AAEEERLR+EFEREGR+LPPK DSQVFDSNVITPGTEFM VLSIALQYY+HL
Sbjct: 121 SAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN+D GW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 RLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQ++CFLCGQ GH A+NCEGK K++AGE DEKGD KK
Sbjct: 241 LATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKK 300
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFLHIW LREYL+ E RIPNPPFEIDLE IVDDFIF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEFR+ GYLTDG KP+L+RVE FIQAVGS+ED+IFQKRA HQR AER+K
Sbjct: 361 INLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVK 420
Query: 421 REKA--QARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
R+KA +R DD P QPD LVPV+RF GSRLAS P+PSP+Q ++ G S
Sbjct: 421 RDKAGKATKRMDDEAPTVQPD-LVPVARFSGSRLASAPTPSPFQSND---------GRSA 470
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
KV RLS G+++GAAIV+ ENS E+D +ENKEE K KLKEL+R+KSDAFNSD EEDK
Sbjct: 471 PHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDAFNSDTTEEDK 530
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
VKLG+PGW+ERYYEEKF+ TPEE E RKDVVL+YTEGLCWVMHYY EGVCSWQWFYPY
Sbjct: 531 VKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPY 590
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFASDLKDL + +I FELG PFKPFNQLLGVFP+ASSHALPE YR LMTDPNSPI D
Sbjct: 591 HYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPIID 650
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYPTDFEVDMNGKR+SWQGIAKLPFIDE RLL+ V ++E TLT+EE RRNS M DMLF+
Sbjct: 651 FYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLFIA 710
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVA 778
SH L+ +++LD HC+QL +ERV+ K ++ P+LSDGMNGY++PC+G+ HPPVFRSP+
Sbjct: 711 TSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLSDGMNGYLTPCSGETHPPVFRSPME 770
Query: 779 SMEDIMGNQVL 789
MEDI+ NQV+
Sbjct: 771 GMEDILTNQVI 781
>gi|115441335|ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3' exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|215713440|dbj|BAG94577.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/790 (79%), Positives = 697/790 (88%), Gaps = 5/790 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEE V I+GVK+PVDTSKPNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVLSIALQYYIHL
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW+++KVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDEKG E +VPKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKG-EAIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+ NPPF ID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L +VEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VPV+RF GSRLASGP PSPY+Q+ G N G + R
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQN---GSDKNNGGKNSRA 476
Query: 481 HKVPRL-SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K R+ SSG++I AAIVEAEN E +ENKE+ K LK+ LR+KSD FNS+NPEEDK+
Sbjct: 477 RKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFNSENPEEDKI 536
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW+ERYYEEKF A+TP + EE R+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 537 KLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYH 596
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL L Q NI+FELG PFKPF+QL+GVFP+ASSHALP YR+LMTD NSPI DF
Sbjct: 597 YAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDF 656
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YPTDFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNSIM +MLFV
Sbjct: 657 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNG 716
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
SHPLS IY+L+ L +ER E+KE+++P S GMNGYIS C+GDP PPVFRSPV
Sbjct: 717 SHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDG 776
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 777 LEDIMDNQVI 786
>gi|19571126|dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
Length = 1064
Score = 1228 bits (3176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/790 (79%), Positives = 697/790 (88%), Gaps = 5/790 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEE V I+GVK+PVDTSKPNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVLSIALQYYIHL
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW+++KVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDEKG E +VPKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKG-EAIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+ NPPF ID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L +VEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VPV+RF GSRLASGP PSPY+Q+ G N G + R
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQN---GSDKNNGGKNSRA 476
Query: 481 HKVPRL-SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K R+ SSG++I AAIVEAEN E +ENKE+ K LK+ LR+KSD FNS+NPEEDK+
Sbjct: 477 RKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFNSENPEEDKI 536
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW+ERYYEEKF A+TP + EE R+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 537 KLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYH 596
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL L Q NI+FELG PFKPF+QL+GVFP+ASSHALP YR+LMTD NSPI DF
Sbjct: 597 YAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDF 656
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YPTDFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNSIM +MLFV
Sbjct: 657 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNG 716
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
SHPLS IY+L+ L +ER E+KE+++P S GMNGYIS C+GDP PPVFRSPV
Sbjct: 717 SHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDG 776
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 777 LEDIMDNQVI 786
>gi|9369381|gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
Length = 1037
Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/807 (76%), Positives = 693/807 (85%), Gaps = 28/807 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWLAEKYPL+VADVIEEEPV I+G+KIPVDTSKPNPN LEYDNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF+EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++KDA+D+AAEEERLR+EFEREGR+LPPK DSQVFDSNVITPGTEFM VLSIALQYY+HL
Sbjct: 121 SAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN+D GW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 RLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQ++CFLCGQ GH A+NCEGK K++AGE DEKGD KK
Sbjct: 241 LATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKK 300
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFLHIW LREYL+ E RIPNPPFEIDLE IVDDFIF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEFR+ GYLTDG KP+L+RVE FIQAVGS+ED+IFQKRA HQR AER+K
Sbjct: 361 INLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVK 420
Query: 421 REKA--QARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
R+KA +R DD P QPD LVPV+RF GSRLAS P+PSP+Q ++ G S
Sbjct: 421 RDKAGKATKRMDDEAPTVQPD-LVPVARFSGSRLASAPTPSPFQSND---------GRSA 470
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
KV RLS G+++GAAIV+ ENS E+D +ENKEE K KLKEL+R+KSDAFNSD EEDK
Sbjct: 471 PHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDAFNSDTTEEDK 530
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
VKLG+PGW+ERYYEEKF+ TPEE E RKDVVL+YTEGLCWVMHYY EGVCSWQWFYPY
Sbjct: 531 VKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPY 590
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFASDLKDL + +I FELG PFKPFNQLLGVFP+ASSHALPE YR LMTDPNSPI D
Sbjct: 591 HYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPIID 650
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYPTDFEVDMNGKR+SWQGIAKLPFIDE RLL+ V ++E TLT+EE RRNS M DMLF+
Sbjct: 651 FYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLFIA 710
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL----------------SDGMNGYIS 762
SH L+ +++LD HC+QL +ERV+ K ++ P+L SDGMNGY++
Sbjct: 711 TSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLRPTNTKLFPDVLITTCSDGMNGYLT 770
Query: 763 PCAGDPHPPVFRSPVASMEDIMGNQVL 789
PC+G+ HPPVFRSP+ MEDI+ NQV+
Sbjct: 771 PCSGETHPPVFRSPMEGMEDILTNQVI 797
>gi|357126119|ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
Length = 1061
Score = 1213 bits (3139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/790 (78%), Positives = 693/790 (87%), Gaps = 5/790 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEEPV I+GVK+PVDTSKPNPN LE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEE+LR+EFEREGRKLPPK SQ DSNVITPGTEFMAVLS+ALQYYIHL
Sbjct: 121 AAKDAADAAAEEEKLREEFEREGRKLPPKLQSQTCDSNVITPGTEFMAVLSVALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW++IKVILSDANVPGEGEHK+MSY+R QRNLPG++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKQIKVILSDANVPGEGEHKVMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVVFTPGQQ+KCFLCGQ GHLAA CEGKAKRKAGEFDEKGD +VPKK
Sbjct: 241 LATHEVHFSILREVVFTPGQQEKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGD-AIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREY++YEFR+PNPPF+IDLE I+DDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYIEYEFRMPNPPFQIDLERIIDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRARLHQR AERI+
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDACTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIR 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
R+KAQA+RGDD++P + D +VPV+RF GSRLASG SP++Q+ G N R
Sbjct: 420 RDKAQAKRGDDLDPHVRTDLIVPVARFQGSRLASGSVASPFEQN---GSHKNSTEKGSRA 476
Query: 481 HKVPRL-SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K R+ SS +++ AA+VEAENS E +ENKE+ K+ LK+ LR+KSD FNS+NPEEDKV
Sbjct: 477 QKAARVSSSDSSLSAALVEAENSLEAQERENKEDMKSMLKDALREKSDLFNSENPEEDKV 536
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW+ERYYE+KF A+TPE+ EE R+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 537 KLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYH 596
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDLK L + NI+F LG PFKPF+QL+GVFP+ASSHALP YRKLM+DPNSPI DF
Sbjct: 597 YAPFASDLKGLGELNITFNLGSPFKPFDQLMGVFPAASSHALPLQYRKLMSDPNSPIIDF 656
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DFEVDMNGKR+SWQGIAKLPFIDE+RLL E+KK+EHTLT EEARRNS M +MLFV
Sbjct: 657 YPIDFEVDMNGKRFSWQGIAKLPFIDESRLLAEIKKVEHTLTPEEARRNSTMYNMLFVNG 716
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
SHPLS IY+L+ L ER +KE L+P S GMNGYIS C GDP PPVFRSPV
Sbjct: 717 SHPLSPYIYSLNSKFGHLPDDERNTIKELLDPSASGGMNGYISLCGGDPSPPVFRSPVDG 776
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 777 LEDIMDNQVI 786
>gi|413921159|gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1058
Score = 1196 bits (3095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/790 (78%), Positives = 688/790 (87%), Gaps = 8/790 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEEPV I+GV++PVDTSKPNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLF+MVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGR+LP K SQ DSNVITPGTEFMAVLS+ALQYYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYIHQ 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW+KIKVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVVFTPGQQDKCFLCGQ GHLAANCEGKAKRKAGE+DEKG E +VPKK
Sbjct: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKG-EAIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VPVS F GSRLASG PSPY+Q+ N +
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVSNFRGSRLASGAVPSPYEQNGSQRERYN------QT 473
Query: 481 HKVPRL-SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K PR+ SSG++I AAIVEAE E +ENKEE K+ LK+ LR+KSD FNS+N EEDKV
Sbjct: 474 RKAPRVSSSGSSIAAAIVEAEQDLEAQERENKEELKSMLKDALREKSDVFNSENSEEDKV 533
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW++RYYEEKF A+TPE EE R+DV L+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 534 KLGEPGWRDRYYEEKFGARTPERMEEIRRDVALKYTEGLCWVMHYYYEGVCSWQWFYPYH 593
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL L Q NI+FELG PFKPF+QL+GVFP+AS+HALP YR+LMTDPNSPI DF
Sbjct: 594 YAPFASDLTSLSQLNITFELGSPFKPFDQLMGVFPAASAHALPLKYRQLMTDPNSPIIDF 653
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YPTDFEVDMNGKR+SWQGIAKLPFI+E RLL E+KK+E TLT EEARRNS M +MLFV
Sbjct: 654 YPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEARRNSTMCNMLFVNG 713
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
+H LS IY+L+ L K+R +KE+L+P S GMNGYI+ C GDP PPVFRSPV
Sbjct: 714 AHSLSPYIYSLNSKFGHLPDKDRGAIKEKLDPSASGGMNGYIALCGGDPSPPVFRSPVDG 773
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 774 LEDIMDNQVI 783
>gi|413921160|gb|AFW61092.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1079
Score = 1184 bits (3062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/811 (76%), Positives = 688/811 (84%), Gaps = 29/811 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEEPV I+GV++PVDTSKPNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLF+MVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGR+LP K SQ DSNVITPGTEFMAVLS+ALQYYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYIHQ 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW+KIKVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVVFTPGQQDKCFLCGQ GHLAANCEGKAKRKAGE+DEKG E +VPKK
Sbjct: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKG-EAIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VPVS F GSRLASG PSPY+Q+ N +
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVSNFRGSRLASGAVPSPYEQNGSQRERYN------QT 473
Query: 481 HKVPRL-SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K PR+ SSG++I AAIVEAE E +ENKEE K+ LK+ LR+KSD FNS+N EEDKV
Sbjct: 474 RKAPRVSSSGSSIAAAIVEAEQDLEAQERENKEELKSMLKDALREKSDVFNSENSEEDKV 533
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW++RYYEEKF A+TPE EE R+DV L+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 534 KLGEPGWRDRYYEEKFGARTPERMEEIRRDVALKYTEGLCWVMHYYYEGVCSWQWFYPYH 593
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL L Q NI+FELG PFKPF+QL+GVFP+AS+HALP YR+LMTDPNSPI DF
Sbjct: 594 YAPFASDLTSLSQLNITFELGSPFKPFDQLMGVFPAASAHALPLKYRQLMTDPNSPIIDF 653
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YPTDFEVDMNGKR+SWQGIAKLPFI+E RLL E+KK+E TLT EEARRNS M +MLFV
Sbjct: 654 YPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEARRNSTMCNMLFVNG 713
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL---------------------SDGMN 758
+H LS IY+L+ L K+R +KE+L+P S GMN
Sbjct: 714 AHSLSPYIYSLNSKFGHLPDKDRGAIKEKLDPSARLAKFFRIIDSLTLLLLFLLFSGGMN 773
Query: 759 GYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
GYI+ C GDP PPVFRSPV +EDIM NQV+
Sbjct: 774 GYIALCGGDPSPPVFRSPVDGLEDIMDNQVI 804
>gi|22531090|gb|AAM97049.1| unknown protein [Arabidopsis thaliana]
gi|23197934|gb|AAN15494.1| unknown protein [Arabidopsis thaliana]
Length = 763
Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/755 (78%), Positives = 661/755 (87%), Gaps = 12/755 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWLAEKYPL+VADVIEEEPV I+G+KIPVDTSKPNPN LEYDNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF+EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++KDA+D+AAEEERLR+EFEREGR+LPPK DSQVFDSNVITPGTEFM VLSIALQYY+HL
Sbjct: 121 SAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN+D GW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 RLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQ++CFLCGQ GH A+NCEGK K++AGE DEKGD KK
Sbjct: 241 LATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKK 300
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFLHIW LREYL+ E RIPNPPFEIDLE IVDDFIF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGA 360
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEFR+ GYLTDG KP+L+RVE FIQAVGS+ED+IFQKRA HQR AER+K
Sbjct: 361 INLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVK 420
Query: 421 REKA--QARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
R+KA +R DD P QPD LVPV+RF GSRLAS P+PSP+Q ++ G S
Sbjct: 421 RDKAGKATKRMDDEAPTVQPD-LVPVARFSGSRLASAPTPSPFQSND---------GRSA 470
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
KV RLS G+++GAAIV+ ENS E+D +ENKEE K KLKEL+R+KSDAFNSD EEDK
Sbjct: 471 PHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDAFNSDTTEEDK 530
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
VKLG+PGW+ERYYEEKF+ TPEE E RKDVVL+YTEGLCWVMHYY EGVCSWQWFYPY
Sbjct: 531 VKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPY 590
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFASDLKDL + +I FELG PFKPFNQLLGVFP+ASSHALPE YR LMTDPNSPI D
Sbjct: 591 HYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPIID 650
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYPTDFEVDMNGKR+SWQGIAKLPFIDE RLL+ V ++E TLT+EE RRNS M DMLF+
Sbjct: 651 FYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLFIA 710
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL 753
SH L+ +++LD HC+QL +ERV+ K ++ P+L
Sbjct: 711 TSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKL 745
>gi|222619617|gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japonica Group]
Length = 1042
Score = 1173 bits (3035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/790 (77%), Positives = 675/790 (85%), Gaps = 31/790 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEE V I+GVK+PVDTSKPNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVLSIALQYYIHL
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW+++KVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDEKG E +VPKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKG-EAIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+ NPPF ID E IVDDFIFMCFFVGNDFLPHMPTLEIRE
Sbjct: 300 PYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIRE-- 357
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
P L +VEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 358 ------------------------PDLNKVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 393
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VPV+RF GSRLASGP PSPY+Q+ G N G + R
Sbjct: 394 REKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQN---GSDKNNGGKNSRA 450
Query: 481 HKVPRL-SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K R+ SSG++I AAIVEAEN E +ENKE+ K LK+ LR+KSD FNS+NPEEDK+
Sbjct: 451 RKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREKSDVFNSENPEEDKI 510
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW+ERYYEEKF A+TP + EE R+DVVL+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 511 KLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYH 570
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL L Q NI+FELG PFKPF+QL+GVFP+ASSHALP YR+LMTD NSPI DF
Sbjct: 571 YAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDANSPIIDF 630
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YPTDFEVDMNGKRYSWQGIAKLPFIDEARLL E+KK+EHTLT EEARRNSIM +MLFV
Sbjct: 631 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNMLFVNG 690
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
SHPLS IY+L+ L +ER E+KE+++P S GMNGYIS C+GDP PPVFRSPV
Sbjct: 691 SHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDG 750
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 751 LEDIMDNQVI 760
>gi|242080797|ref|XP_002445167.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
gi|241941517|gb|EES14662.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
Length = 945
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/706 (80%), Positives = 629/706 (89%), Gaps = 8/706 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEEPV I+GV++PVDTSKPNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVF+CMFDYIDRLF+MVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFKCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGR+LP K SQ DSNVITPGTEFMAVLSIALQYYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVLSIALQYYIHQ 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW+KIKVILSDANVPGEGEHKIMSY+R QRNLPG++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVVFTPGQQDKCFLCGQ GHLAANCEGKAKRKAGE+DEKG E +VPKK
Sbjct: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKG-EAIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIF+CFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFICFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRARLHQR +ERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQSERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VPV+ F GSRLASG PSPY+Q+ R N +
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPVANFRGSRLASGAVPSPYEQNGSR-RERNSQAL---- 474
Query: 481 HKVPRL-SSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K PR+ SSG++I AAIVEAE E ENKE K+ LK+ LR KSD FNS+NPEEDKV
Sbjct: 475 -KAPRVSSSGSSIAAAIVEAEKDLEAQELENKENLKSMLKDALRGKSDVFNSENPEEDKV 533
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
KLGEPGW++RYYE+KF A+TPE EE R+DV L+YTEGLCWVMHYYYEGVCSWQWFYPYH
Sbjct: 534 KLGEPGWRDRYYEDKFGARTPERMEEIRRDVALKYTEGLCWVMHYYYEGVCSWQWFYPYH 593
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASDL+ L Q NI+FELG PFKPF+QL+GVFP+AS+HALP YR+LMTDPNSPI DF
Sbjct: 594 YAPFASDLRSLSQLNITFELGLPFKPFDQLMGVFPAASAHALPLKYRQLMTDPNSPIVDF 653
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 705
YPTDFEVDMNGKR+SWQGIAKLPFIDE RLL E+KK+EHTLT EA
Sbjct: 654 YPTDFEVDMNGKRFSWQGIAKLPFIDEDRLLAEIKKVEHTLTSVEA 699
>gi|15238990|ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein
EXORIBONUCLEASE 2
gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis thaliana]
gi|51970342|dbj|BAD43863.1| unnamed protein product [Arabidopsis thaliana]
gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007441|gb|AED94824.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/796 (65%), Positives = 627/796 (78%), Gaps = 30/796 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG--VKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVP+FYRWL ++YPL + +VIEEEP+ ++G V IP+D+SKPNPNG EYDNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCFHPED+P+PTTF EVFQCMFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE + + VV
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG YE++IFQKRA++ QR +ER
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
+R+KA+ + D+ AQ SR SG + +LD+ S
Sbjct: 419 FRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQLDSLDEVSD 457
Query: 479 RPHKVP-----RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
H P RLS IG A VE ENS + + +N+E+ K KLK+LLRDK D F S N
Sbjct: 458 SLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGN 517
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHYYY GVCSW
Sbjct: 518 GEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWN 577
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE YR LMT+P+
Sbjct: 578 WFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPD 637
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE RRNS + D
Sbjct: 638 SPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFD 697
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
MLFV+ SHPL I +L+ L +ER + E+++P LSDGMNGYI+ C GD P F
Sbjct: 698 MLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCF 757
Query: 774 RSPVASMEDIMGNQVL 789
S V MED++ NQV+
Sbjct: 758 CSTVEGMEDVLTNQVI 773
>gi|13605795|gb|AAK32883.1|AF367296_1 AT5g42540/K16E1_1 [Arabidopsis thaliana]
gi|20147139|gb|AAM10286.1| AT5g42540/K16E1_1 [Arabidopsis thaliana]
Length = 813
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/796 (65%), Positives = 627/796 (78%), Gaps = 30/796 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG--VKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVP+FYRWL ++YPL + +VIEEEP+ ++G V IP+D+SKPNPNG EYDNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCFHPED+P+PTTF EVFQCMFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE + + VV
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG YE++IFQKRA++ QR +ER
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
+R+KA+ + D+ AQ SR SG + +LD+ S
Sbjct: 419 FRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQLDSLDEVSD 457
Query: 479 RPHKVP-----RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
H P RLS IG A VE ENS + + +N+E+ K KLK+LLRDK D F S N
Sbjct: 458 SLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGN 517
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHYYY GVCSW
Sbjct: 518 GEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWN 577
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE YR LMT+P+
Sbjct: 578 WFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPD 637
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE RRNS + D
Sbjct: 638 SPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFD 697
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
MLFV+ SHPL I +L+ L +ER + E+++P LSDGMNGYI+ C GD P F
Sbjct: 698 MLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCF 757
Query: 774 RSPVASMEDIMGNQVL 789
S V MED++ NQV+
Sbjct: 758 CSTVEGMEDVLTNQVI 773
>gi|297795249|ref|XP_002865509.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
gi|297311344|gb|EFH41768.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
Length = 1053
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/843 (62%), Positives = 628/843 (74%), Gaps = 81/843 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-VKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVP+FYRWL ++YPL++ +VIEEEP+ ++G V IP+DTSKPNPNG EYDNLYLDMNGII
Sbjct: 1 MGVPSFYRWLIQRYPLIIQEVIEEEPLEVNGGVTIPIDTSKPNPNGYEYDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPED+P+PTTF EVFQCMFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA LS AL+YYIH
Sbjct: 121 RAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLYGLDADLIML
Sbjct: 181 VRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHE+HFSILREVVF PG++DKCFLCGQ GH AA+CEGK KRKAGE + + VV K
Sbjct: 241 SLATHEIHFSILREVVFFPGEEDKCFLCGQVGHRAADCEGKMKRKAGEMLDDTEADVVVK 300
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KPY+F++IW LREYL+++ +IPN + +L+ ++DDFIF+CFFVGNDFLPHMPTLEIREG
Sbjct: 301 KPYEFVNIWILREYLEHDMQIPNQRSKKNLDRLIDDFIFICFFVGNDFLPHMPTLEIREG 360
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG+YE++IFQKRA++ QR + R
Sbjct: 361 AIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGTYENQIFQKRAQVQQRQSGRF 420
Query: 420 KREKAQARRGDDVEP-------LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
R+KA+ + D V+ L Q DSL VS L S P
Sbjct: 421 IRDKAREKARDSVQASRKFSGKLVQLDSLDEVS----DSLHSSP---------------- 460
Query: 473 GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ------------------------ 508
P K RLS IG A VE ENSF+ +
Sbjct: 461 -------PRKHLRLSLDNNIGVANVETENSFKAEVSHLVSRLRNFNKFVACLPFFFELQF 513
Query: 509 ----------------------ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGW 546
+N E+ K KLK+LLRDKSD F+S E+DKVKLG GW
Sbjct: 514 FCFGAFLSHLNCAKVHSGFQELDNGEDLKFKLKKLLRDKSDVFSSGKGEQDKVKLGATGW 573
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
+ERYYEEKF AK+ EE E R+DVVL+YTEGLCW+MHYYY GVCSW WFYPYHYAPFASD
Sbjct: 574 RERYYEEKFTAKSAEEMELIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASD 633
Query: 607 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 666
LK LD +I FELG PFKPFNQLL V PSAS+HALP+ YR LMTDP SPI+DFY DFE+
Sbjct: 634 LKGLDSLDIKFELGSPFKPFNQLLAVLPSASAHALPQCYRTLMTDPASPIADFYAADFEI 693
Query: 667 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSAS 726
DMNGKRYSWQGI+KLPF+DE RLL+ +E +LT EE RRNS++ DMLFV+ SHPL+
Sbjct: 694 DMNGKRYSWQGISKLPFVDERRLLEAAALVEKSLTNEEIRRNSVLFDMLFVVASHPLAEL 753
Query: 727 IYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGN 786
I +L+ L +ER + E+++P LSDGMNGYI+ C GD PP F SPV MED++ N
Sbjct: 754 IRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPPCFSSPVEGMEDVLAN 813
Query: 787 QVL 789
V+
Sbjct: 814 HVI 816
>gi|62318783|dbj|BAD93823.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/796 (65%), Positives = 625/796 (78%), Gaps = 30/796 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG--VKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVP+FYRWL ++YPL + +VIEEEP+ ++G V IP+D+SKPNPNG EYDNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCFHPED+P+PTTF EVFQCMFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE + + VV
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GAI LLM+VYK +FR+ YLTD SK +LR E FI+AVG YE++IFQKRA++ Q +ER
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNDERFIKAVGMYENQIFQKRAQVQQSQSER 418
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
+R+KA+ + D+ AQ SR SG + +LD+ S
Sbjct: 419 FRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQLDSLDEVSD 457
Query: 479 RPHKVP-----RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
H P RLS IG A VE ENS + + +N+E+ K KLK+LLRDK D F S N
Sbjct: 458 SLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGN 517
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHYYY GVCSW
Sbjct: 518 GEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWN 577
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE YR LMT+P+
Sbjct: 578 WFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPD 637
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE RRNS + D
Sbjct: 638 SPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFD 697
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
MLFV+ SHPL I +L+ L +ER + E+++P LSDGMNGYI+ C GD P F
Sbjct: 698 MLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCF 757
Query: 774 RSPVASMEDIMGNQVL 789
S V MED++ NQV+
Sbjct: 758 CSTVEGMEDVLTNQVI 773
>gi|334188143|ref|NP_001190450.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007442|gb|AED94825.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1023
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/807 (64%), Positives = 627/807 (77%), Gaps = 41/807 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG--VKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVP+FYRWL ++YPL + +VIEEEP+ ++G V IP+D+SKPNPNG EYDNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCFHPED+P+PTTF EVFQCMFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE + + VV
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG YE++IFQKRA++ QR +ER
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
+R+KA+ + D+ AQ SR SG + +LD+ S
Sbjct: 419 FRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQLDSLDEVSD 457
Query: 479 RPHKVP-----RLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
H P RLS IG A VE ENS + + +N+E+ K KLK+LLRDK D F S N
Sbjct: 458 SLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKFKLKKLLRDKGDGFRSGN 517
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHYYY GVCSW
Sbjct: 518 GEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWN 577
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE YR LMT+P+
Sbjct: 578 WFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPD 637
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE RRNS + D
Sbjct: 638 SPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFD 697
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL-----------SDGMNGYIS 762
MLFV+ SHPL I +L+ L +ER + E+++P L SDGMNGYI+
Sbjct: 698 MLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSEHIQKFLDVCSDGMNGYIA 757
Query: 763 PCAGDPHPPVFRSPVASMEDIMGNQVL 789
C GD P F S V MED++ NQV+
Sbjct: 758 SCGGDSQPSCFCSTVEGMEDVLTNQVI 784
>gi|9759012|dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 746
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/769 (64%), Positives = 597/769 (77%), Gaps = 45/769 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG--VKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVP+FYRWL ++YPL + +VIEEEP+ ++G V IP+D+SKPNPNG EYDNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCFHPED+P+PTTF EVFQCMFDYIDRLFVMVRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+KDAA++AAEEE+LR+EFEREG+KLPPK DSQVFDSNVITPGTEFMA LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H+RLN+DPGW+ IKVILSDANVPGEGEHKIMSY+R +N PGY+PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+LATHE+HFSILREV F PG++ KCFLCGQ GH AA+CEGK KRK GE + + VV
Sbjct: 241 LSLATHEIHFSILREVFF-PGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPHMPTLEIRE
Sbjct: 300 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 357
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GAI LLM+VYK +FR+ YLTD SK +LR VE FI+AVG YE++IFQKR R +ER
Sbjct: 358 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKR-----RQSER 412
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
+R+KA+ + D+ AQ SR SG + +LD+ S
Sbjct: 413 FRRDKARDKARDNARDNAQ-----------ASRQFSGK----------LVQLDSLDEVSD 451
Query: 479 RPHKVP-----RLSSGATIGAAIVEAENSFETDPQ---------ENKEEFKAKLKELLRD 524
H P RLS IG A VE ENS + + +N+E+ K KLK+LLRD
Sbjct: 452 SLHSSPSRKYLRLSLDDNIGVANVETENSLKAECTKVHSGFQELDNEEDLKFKLKKLLRD 511
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
K D F S N E+DKVKL + GW+ERYYEEKF AK+ EE E+ R+DVVL+YTEGLCW+MHY
Sbjct: 512 KGDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHY 571
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY GVCSW WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HALPE
Sbjct: 572 YYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPEC 631
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
YR LMT+P+SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT EE
Sbjct: 632 YRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEE 691
Query: 705 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL 753
RRNS + DMLFV+ SHPL I +L+ L +ER + E+++P L
Sbjct: 692 IRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGL 740
>gi|357472639|ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507659|gb|AES88801.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 909
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/623 (74%), Positives = 515/623 (82%), Gaps = 11/623 (1%)
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
MAVLS+ALQYYIHLRLNNDPGW+ IKVILSDANVPGEGEHKI SY+RLQRNL GYDPNT+
Sbjct: 1 MAVLSVALQYYIHLRLNNDPGWKNIKVILSDANVPGEGEHKITSYIRLQRNLKGYDPNTQ 60
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
HCLYGLDADLIML LATHE+HFSILREVVFTPGQ DKCFLCGQ GH+AA CEGKAKRK
Sbjct: 61 HCLYGLDADLIMLGLATHEIHFSILREVVFTPGQ-DKCFLCGQMGHMAAECEGKAKRKTD 119
Query: 287 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 346
DEKGD +V K P+QFL+IWTLREYL+YE RIPN PFEID ECI+DDFIF+CFFVGND
Sbjct: 120 --DEKGDAIVA-KLPFQFLNIWTLREYLEYEMRIPNSPFEIDFECILDDFIFICFFVGND 176
Query: 347 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
FLPHMPTL+IREGAI+ LM VYK EF LGGYLT+GSKP+L RVEHFIQAVGS+ED IFQ
Sbjct: 177 FLPHMPTLDIREGAIDSLMTVYKNEFTKLGGYLTNGSKPNLSRVEHFIQAVGSHEDEIFQ 236
Query: 407 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 466
KRARLHQR E IKR K QAR GDDV P QP+SL +S+FHGSRLAS PSP+QQS
Sbjct: 237 KRARLHQRQVETIKRRKRQAR-GDDVGPQVQPESLAAISQFHGSRLASALMPSPFQQS-- 293
Query: 467 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 526
+ K +P KV RLSSG T+ AAIVEAENS E D Q+N++E KAKLK +L DKS
Sbjct: 294 ----GHNKEVLEKPSKVSRLSSGVTVVAAIVEAENSLEIDVQDNEDELKAKLKRILLDKS 349
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D FNS EDK+KLGEPGWKERYYEEKF+AKTPEE RKDVVL+YTEGLCWVMHYYY
Sbjct: 350 DVFNSKGGHEDKIKLGEPGWKERYYEEKFSAKTPEELVAIRKDVVLKYTEGLCWVMHYYY 409
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
EGVCSWQWFYPYHYAPFASDLK L + NI+FELG PFKPF+QL+GVFP+ASSHALPE YR
Sbjct: 410 EGVCSWQWFYPYHYAPFASDLKGLSELNINFELGAPFKPFDQLIGVFPAASSHALPETYR 469
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
KLMTDP+SPI DFYP DFEVDMNGKR++WQGIAKLPFIDE RLL V+KIE+ LT EE R
Sbjct: 470 KLMTDPSSPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDETRLLAAVQKIENFLTPEEKR 529
Query: 707 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG 766
RN+IM DMLFV HPLSA I TLD C+ ER VKE++NP S GMNGYIS C G
Sbjct: 530 RNAIMFDMLFVNSCHPLSACISTLDNKCRNTSNCERANVKEKINPIESGGMNGYISFCDG 589
Query: 767 DPHPPVFRSPVASMEDIMGNQVL 789
+P PP FRSPVA MEDI+ N V+
Sbjct: 590 EPCPPFFRSPVAGMEDIIDNHVI 612
>gi|414876882|tpg|DAA54013.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 591
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/595 (81%), Positives = 531/595 (89%), Gaps = 5/595 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYP+VV DV+EEEPV I+GVK+PVDTSKPNPN LE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAAD+AAEEERLR+EFEREGRKLPPK SQ DSNVITPGTEFMAVLS+ALQYYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSVALQYYIHR 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW++IKVILSDANVPGEGEHKIMSY+R QRNL G++PNTRHCLYGLDADLIMLA
Sbjct: 181 RLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREVV+TPGQQDKCFLCGQ GHLAANCEGK KRKAGEFDEKG +VPKK
Sbjct: 241 LATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGG-AIVPKK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFL+IWTLREYL+YEFR+PNPPF+ID E IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLMAVYKKEF ++GGYLTD P L RVEHFIQAVGSYED+IFQKRARLHQR AERIK
Sbjct: 360 INLLMAVYKKEFPSMGGYLTDSCTPDLSRVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
REKAQA+RGDD++P + D +VP+ RF GSRLASG P PY+Q+ G + K + R
Sbjct: 420 REKAQAKRGDDLDPHVRDDLIVPIQRFQGSRLASGAVPVPYEQN---GSHKDNKERNSRA 476
Query: 481 HKVPRLS-SGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
K R+S SG++I +A+VEAEN E ENKEE K+ LK+ LR+KSD FNSDNPEEDKV
Sbjct: 477 RKAARVSTSGSSIASALVEAENDLEAQECENKEELKSMLKDALREKSDIFNSDNPEEDKV 536
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
KLGEPGW+ERYYEEKF A+TPE+ EE R+DVVL+YTEGLCWVMHYYYEGVCSWQW
Sbjct: 537 KLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQW 591
>gi|359490022|ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 834
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/791 (54%), Positives = 542/791 (68%), Gaps = 59/791 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+PAFYRWLA++YPL V + +E+ P V++GV + VDT++PNPNG E+DNLYLDMNGIIH
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPE PAP T+ +VF+ +F YIDR+F +VRPRKLLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 61 PCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+K+AAD A+ ERL+ FE E L ++ DSNVITPGTEFMA+LS AL+YYIHL
Sbjct: 121 AAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHL 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N DPGW IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 181 RMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE+HFSILRE V ++DK +P + + K K GE + E + ++
Sbjct: 241 LATHEIHFSILREDVHKAYRKDKN---NKPRKDSLLVNKRGKSKQGEVGGEDIEDFISRQ 297
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+QFL+IWTLR+YL ++ IP+ + DLE ++DDF+FMC FVGNDFLPHMP+LEI EGA
Sbjct: 298 KFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGA 357
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+LLM VYKKEF +GGYLT+ S+ L RVE F+Q VGS+E+ IF+KR+++
Sbjct: 358 IDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQV--------- 408
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV--GRLDNGKGTSG 478
Q +RG RF GS ++ + S Y + CV + G+S
Sbjct: 409 ----QKKRG---------------VRFQGS--SNKKTVSDYSTTPCVEPQGMTGSSGSSL 447
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
P K P F D + + +KE+ + N DK
Sbjct: 448 EPRKTP------------------FCQDSKN------STVKEIQCSTNCISTGANSLVDK 483
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KLGE GWKER+Y EKF AKT ++RE R+ VL+Y EG+CWVMHYYY+GVCSWQWFYPY
Sbjct: 484 IKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFYPY 543
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFASD+ LDQ +I F LG PFKPF+QL+GV P+AS+HALP +YRKLM D SPI D
Sbjct: 544 HYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETSPILD 603
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DFE+DMNGKRY WQ I KLPFI E+RLL E+ K+E TLT++E RN + D LF+
Sbjct: 604 FYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIH 663
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVA 778
+S PL+ I++ + K +VK +++P+ S GMNGY+ P F SP+
Sbjct: 664 ISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMYISDRPVWPAEFYSPIE 723
Query: 779 SMEDIMGNQVL 789
ME I N+V+
Sbjct: 724 DMEMIAQNKVI 734
>gi|297737374|emb|CBI26575.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/791 (53%), Positives = 526/791 (66%), Gaps = 78/791 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+PAFYRWLA++YPL V + +E+ P V +DNLYLDMNGIIH
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAV-------------------FDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPE PAP T+ +VF+ +F YIDR+F +VRPRKLLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 42 PCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFR 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+K+AAD A+ ERL+ FE E L ++ DSNVITPGTEFMA+LS AL+YYIHL
Sbjct: 102 AAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHL 161
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N DPGW IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 162 RMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 221
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE+HFSILRE V ++DK +P + + K K GE + E + ++
Sbjct: 222 LATHEIHFSILREDVHKAYRKDKN---NKPRKDSLLVNKRGKSKQGEVGGEDIEDFISRQ 278
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+QFL+IWTLR+YL ++ IP+ + DLE ++DDF+FMC FVGNDFLPHMP+LEI EGA
Sbjct: 279 KFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGA 338
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+LLM VYKKEF +GGYLT+ S+ L RVE F+Q VGS+E+ IF+KR+++
Sbjct: 339 IDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQV--------- 389
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV--GRLDNGKGTSG 478
Q +RG RF GS ++ + S Y + CV + G+S
Sbjct: 390 ----QKKRG---------------VRFQGS--SNKKTVSDYSTTPCVEPQGMTGSSGSSL 428
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
P K P F D + + +KE+ + N DK
Sbjct: 429 EPRKTP------------------FCQDSKN------STVKEIQCSTNCISTGANSLVDK 464
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KLGE GWKER+Y EKF AKT ++RE R+ VL+Y EG+CWVMHYYY+GVCSWQWFYPY
Sbjct: 465 IKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFYPY 524
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFASD+ LDQ +I F LG PFKPF+QL+GV P+AS+HALP +YRKLM D SPI D
Sbjct: 525 HYAPFASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETSPILD 584
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DFE+DMNGKRY WQ I KLPFI E+RLL E+ K+E TLT++E RN + D LF+
Sbjct: 585 FYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIH 644
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVA 778
+S PL+ I++ + K +VK +++P+ S GMNGY+ P F SP+
Sbjct: 645 ISDPLAVKIFSFYKRKKDHPKLPMAKVKRKIDPKFSGGMNGYMYISDRPVWPAEFYSPIE 704
Query: 779 SMEDIMGNQVL 789
ME I N+V+
Sbjct: 705 DMEMIAQNKVI 715
>gi|255557927|ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1545
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/790 (52%), Positives = 521/790 (65%), Gaps = 82/790 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P+FY+WL EKYP V DVIE + +GV +P++T+ PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGIPSFYKWLTEKYPDTVVDVIEARRRMGNGVLLPINTALPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP D P P T++EVF+ +F YID++F MVRPRKLL++ IDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPSDLPPPKTYEEVFRNVFMYIDKIFSMVRPRKLLFLGIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+K+A A +++Q E EG + V DSNVITPGTEFM +LS AL+YYI L
Sbjct: 121 AAKEAEKEAL---KMKQFIELEGENSTSLKEPAVLDSNVITPGTEFMDLLSSALRYYIRL 177
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N D GW IKVILSD+NVPGEGEHKIMSY+RLQR+LPGYDPNTRHCLYGLDADLIMLA
Sbjct: 178 RVNRDSGWRGIKVILSDSNVPGEGEHKIMSYIRLQRDLPGYDPNTRHCLYGLDADLIMLA 237
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF-DEKGDEVVVPK 299
LATHEVHF+ILREV + G+ N + KA K ++ K E V +
Sbjct: 238 LATHEVHFTILREVCAQKHSSKR----GKKHKFVWNPQKKANSKKKKWMPVKTLEEYVSR 293
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
++FL+IW LRE+L+Y+ RIPN + DLE ++DDFIFMC FVGNDFLPH+PTLEI +G
Sbjct: 294 LNFKFLYIWALREHLEYDMRIPNLALQTDLERLIDDFIFMCLFVGNDFLPHIPTLEISQG 353
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+LLM VY+KEFR +GGYLT+ + L RVEHFIQAVG ++D IF++ + + + R
Sbjct: 354 AIDLLMKVYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIFRQHIQKLKEKSAR- 412
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
K E++ R+ +E L Q D P+ +S
Sbjct: 413 KEERSSKRK---LEKLLQND--------------------PHAES--------------- 434
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
+S G+++ ++E D E + S ++ + EED
Sbjct: 435 ------ISGGSSL---LMEKAGGMNFD-------------EPIHHLSAGIDTGDKEEDD- 471
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
WKERYY +KF AKT +E+E R+DVV++Y EGLCWVM YYYEGVCSWQWFYPYH
Sbjct: 472 ------WKERYYAKKFKAKTKDEQESIRRDVVIKYMEGLCWVMRYYYEGVCSWQWFYPYH 525
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASD LD I F LG PFKP +QL+GV P+AS+HALP YRKLMTD +SPI DF
Sbjct: 526 YAPFASDFYGLDDLKIQFTLGVPFKPMDQLMGVLPAASAHALPMLYRKLMTDESSPILDF 585
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP+DFE+DMNGKR WQ I KLPFIDE+RLL E+ K+EHTLT++E RRNS+ ++ LFV +
Sbjct: 586 YPSDFELDMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDERRRNSLGSNFLFVHI 645
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
SHPL+ I K V +++PELS GMNG++ P SPV
Sbjct: 646 SHPLADMIIYF------FKQNRDPNVLLKIDPELSGGMNGFVYISDNAVCPEEVSSPVDG 699
Query: 780 MEDIMGNQVL 789
M I N+V+
Sbjct: 700 MRMIAHNRVI 709
>gi|145347709|ref|XP_001418304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578533|gb|ABO96597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 802
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/799 (51%), Positives = 529/799 (66%), Gaps = 59/799 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRW+A+KYP +VADV+E+EPV G ++ +++++ NPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWIAQKYPKIVADVVEDEPVDALGRRVELNSAEANPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRPAPTT +EVF+C+FDYIDRLF+M+RPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPAPTTEEEVFECIFDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++++A + A EEE+LR++ REG K+ PK +S VFDSNVITPGT FM LS AL+YY+H
Sbjct: 121 SAQEAREKAEEEEKLREKLIREGVKVQPKQESGVFDSNVITPGTPFMGRLSEALKYYVHD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+LNNDPGW I+VI SDA+VPGEGEHK M Y+R QR LPG +PNTRH +YGLDADLIMLA
Sbjct: 181 KLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE HF ILRE+VF + P L E K+ V + +K
Sbjct: 241 LATHEPHFWILREIVFQKKDNEA------PQTLGLGTEETKKK-----------VAIARK 283
Query: 301 PYQFLHIWTLREYLDYEFRIPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
PYQ L + LREYL + R P PF++D E + DDFIFMCFFVGNDFLPH PTLEIREG
Sbjct: 284 PYQLLSVSVLREYLALDMRPVAPTPFKLDPERMFDDFIFMCFFVGNDFLPHSPTLEIREG 343
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+LLM +Y+ LGGYL +P+L VE F++ V +ED IFQKRA+ R
Sbjct: 344 AIDLLMTLYRNCLPTLGGYLCADGRPNLSIVEKFVRLVSEHEDAIFQKRAKKEARMRSSR 403
Query: 420 KREKAQA-------RRGDDVEPLAQPDSLVPVSR-FHGSRLASGPSP-SPYQQSECVGRL 470
+R+K +A R+G VP R GSR AS +P +P +Q +GR
Sbjct: 404 QRDKQKAKDYYERQRKGSGTN--------VPQHRVLGGSRNASDRAPAAPTEQLVALGR- 454
Query: 471 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN 530
G+P P A AEN D +E K + K +DA
Sbjct: 455 -------GKPTPPP--------SAPKTAAENKSAADAL--RERLKTRGKRAAEATADAMG 497
Query: 531 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
E D ++LGE GWK+RYYE K A TP+ R+E + +V+ Y GL WV YY+EG C
Sbjct: 498 EREEETDNIRLGESGWKDRYYEAKMQA-TPQTRDEIIRGMVIEYVRGLIWVCRYYFEGCC 556
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SW WFYPYHYAPFASDL DL + F+LG PFKPF+QL+GV P+ASSHALP + LM+
Sbjct: 557 SWSWFYPYHYAPFASDLYDLSTISTDFDLGKPFKPFSQLMGVLPAASSHALPAAFAPLMS 616
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
D +SPI DFYP DF +DMNGKR++WQ +A LP+ID RLL++ + +E+TLT EE RRNSI
Sbjct: 617 DKDSPIIDFYPEDFALDMNGKRFTWQAVALLPWIDANRLLEQTEMLEYTLTAEEKRRNSI 676
Query: 711 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP 770
+ ++V +HPL+ L+E + K +++P+LS GMN + D P
Sbjct: 677 NEEEIYVNAAHPLAKQFLELEEREDEDVEKTL-----KMDPKLSKGMNATLVSVKRDAQP 731
Query: 771 PVFRSPVASMEDIMGNQVL 789
+ SP++S +DI N+V+
Sbjct: 732 TMIPSPMSSRQDISNNKVV 750
>gi|255565761|ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 993
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/809 (48%), Positives = 503/809 (62%), Gaps = 81/809 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFY+WL KYP V+ + PNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYKWLVNKYPNVI--------------------TSPNPNGLEFDNLYLDMNGIIH 40
Query: 61 PCFHPEDRPAP-TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PCFHP+D P+P TTFDEVF ++ YID +F +VRPR LLY+AIDGVAPRAKMNQQRSRRF
Sbjct: 41 PCFHPDDHPSPPTTFDEVFNNIYKYIDHIFSIVRPRNLLYLAIDGVAPRAKMNQQRSRRF 100
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R +KD + AEEERLR+E+E +G+++ PK S+V DSN+ITPGTEFM LSI LQ Y+
Sbjct: 101 RNAKDTEIAEAEEERLRKEYEIQGKQVLPKQYSEVSDSNIITPGTEFMFTLSIKLQEYMI 160
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+N+DP W+ IKVILSDA+VPGEGEHKIMS++R QR LP Y+PNTRHCLYGLDADLIML
Sbjct: 161 SNINSDPAWKAIKVILSDASVPGEGEHKIMSFIRQQRMLPDYNPNTRHCLYGLDADLIML 220
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQP--GHLA----ANCEGKAKRKAGEFDEK-G 292
ALA+HEVHFSILREVV Q C G + + E K KR+ D
Sbjct: 221 ALASHEVHFSILREVVLLQQPQSICLSAHTSLQGRIEFGEFGSSENKTKRRFSNDDNTLA 280
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDFLPH 350
+V +KPYQFLH+W LR+YL E I +PP F D E I+DDF+FMCFF GNDF+P+
Sbjct: 281 KDVSFIEKPYQFLHVWILRDYLKLEMDIYDPPENFTFDSERIIDDFVFMCFFAGNDFIPN 340
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS--------LRRVEHFIQAVGSYED 402
+PTL+I E A++LLM VYKK F+ LGGYL D + + L+RVE FI +G+YE+
Sbjct: 341 LPTLQIHERAVDLLMTVYKKNFKKLGGYLVDVHQVNSLKNDYLDLKRVEKFILLIGAYEE 400
Query: 403 RIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 462
IF+KR+ L +R ++ + + A +++ + D L +++ + Q
Sbjct: 401 MIFKKRSELRERMLRKLC-QHSDAANAKELDGNVEQDML---------KISFSSLDAKAQ 450
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 522
SE + ++ A + S +N + FK +LK L
Sbjct: 451 ISEDL----------------------VSVSAVSI----SLWFSVLQNTKRFKEELKARL 484
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 582
R KSD F + D VKLG GWK+RYYE+KF+A+ P + E RK++V +YTEGL WV+
Sbjct: 485 RQKSDLFQNGGFRADTVKLGTTGWKKRYYEQKFSAENPSDIELIRKEMVQKYTEGLLWVL 544
Query: 583 HYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALP 642
YY+ V SW WFYPYH+APFASD+K + Q F G PFKPF+QL+GV P S+HALP
Sbjct: 545 GYYFSAVPSWTWFYPYHHAPFASDMKGMAQVKFKFPKGSPFKPFDQLMGVLPPRSAHALP 604
Query: 643 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 702
+ YR+LM D S I DFYP +F++D++GKR+ WQGI KLPFIDE RLL E KK+E LT
Sbjct: 605 KSYRQLMIDERSSIIDFYPAEFQIDIDGKRFMWQGICKLPFIDEERLLAETKKMEKELTR 664
Query: 703 EEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNP---ELSDGMNG 759
+EA +N D LFV + + + L + K+ VE+K L EL G
Sbjct: 665 KEADKNVENVDKLFVRRENFSESQLLQLVSEFAAGRPKDMVEIKNSLRCLLFELPKGSQF 724
Query: 760 YISPCAGDPHPPVFRSPVASMEDIMGNQV 788
P G +P + +DIM Q+
Sbjct: 725 IPRPLEGVKYP----EQIIGDDDIMETQL 749
>gi|147793034|emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
Length = 1102
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/690 (53%), Positives = 459/690 (66%), Gaps = 87/690 (12%)
Query: 5 AFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFH 64
AFYRWLA++YPL V + +E+ P V++GV + VDT++PNPNG E+DNLYLDMNGIIHPCFH
Sbjct: 136 AFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIHPCFH 195
Query: 65 PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKD 124
PE PAP T+ +VF+ +F YIDR+F +VRPRKLLYMAIDGVAPRAKMNQQR+RRFRA+K+
Sbjct: 196 PEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFRAAKE 255
Query: 125 AADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNN 184
AAD A+ ERL+ FE E L ++ DSNVITPGTEFMA+LS AL+YYIHLR+N
Sbjct: 256 AADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNL 315
Query: 185 DPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATH 244
DPGW IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIMLALATH
Sbjct: 316 DPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATH 375
Query: 245 EVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQF 304
E+HFSILRE V ++DK +P + + K GE + E + ++ +QF
Sbjct: 376 EIHFSILREDVHKAYRKDK---NNKPRKDSLLVNKRGXSKQGEVGGEDIEDFISRQKFQF 432
Query: 305 LHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLL 364
L+IWTLR+YL ++ IP+ + DLE ++DDF+FMC FVGNDFLPHMP+LEI EGAI+LL
Sbjct: 433 LNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAIDLL 492
Query: 365 MAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKA 424
M VYKKEF +GGYLT+ S+ L RVE F+Q VGS+E+ IF+KR+++
Sbjct: 493 MTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQV------------- 539
Query: 425 QARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV--GRLDNGKGTSGRPHK 482
Q +RG RF GS ++ + S Y + CV + G+S P K
Sbjct: 540 QKKRG---------------VRFQGS--SNKKTVSDYSTTPCVEPQGMTGSSGSSLEPRK 582
Query: 483 VPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG 542
P I + F E+F+AK E+D+ ++
Sbjct: 583 TPFCQDSKNIKLGEDGWKERFYV------EKFEAK----------------TEDDRERV- 619
Query: 543 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
R+ VL+Y EG+CWVMHYYY+GVCSWQWFYPYHYAP
Sbjct: 620 ------------------------RRHAVLKYIEGICWVMHYYYQGVCSWQWFYPYHYAP 655
Query: 603 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA----SSHALPEHYRKLMTDPNSPISD 658
FASD+ LDQ +I F LG PFKPF+QL+GV P+A S+HALP +YRKLM D SPI D
Sbjct: 656 FASDIYGLDQLDIQFTLGKPFKPFDQLMGVLPAARCTYSAHALPLYYRKLMMDETSPILD 715
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
FYP DFE+DMNGKRY WQ + + P +D +R
Sbjct: 716 FYPADFELDMNGKRYPWQ-LGETPCLDFSR 744
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 732
Y I KLPFI E+RLL E+ K+E TLT++E RN + D LF+ +S PL+ I++ +
Sbjct: 803 YFMHAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIHISDPLAVKIFSFYK 862
Query: 733 HCK------QLKIKERVEVKERLNPE 752
K K+K +++ K RL P+
Sbjct: 863 RKKDHPKLPMAKVKRKIDPKFRLTPQ 888
>gi|300794747|ref|NP_001179401.1| 5'-3' exoribonuclease 2 [Bos taurus]
gi|296481414|tpg|DAA23529.1| TPA: 5'-3' exoribonuclease 2 [Bos taurus]
Length = 951
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/798 (48%), Positives = 506/798 (63%), Gaps = 56/798 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++ E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAEIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-------ARLHQ 413
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R +
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
+R+KR++ G + P A P GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRDQPSFSPGGILTPHALGSRSSP-----GSQVASNPRQAAYEM-----RMQNN 469
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
S P+ SF +D + + ++ K+D +S+
Sbjct: 470 LSPSVSPN-------------------TSFTSDGSPSP-------RGGIKRKADDSDSEP 503
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+
Sbjct: 504 EPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWK 561
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP
Sbjct: 562 WYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDP 621
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
+S I DFYP DF +D+NGKRY+WQG+A LPF+DE RL ++++ LT EE RRNS+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGG 681
Query: 713 DMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-P 771
D+LFV HPL I L + E V+V PEL G+ G S P
Sbjct: 682 DVLFVGKHHPLHDFILEL----YKTGSTESVDVP----PELCHGIQGKFSLDEEAVLPNQ 733
Query: 772 VFRSPVASMEDIMGNQVL 789
V SP+ ++D+ N V+
Sbjct: 734 VVCSPIPVLKDLTHNAVI 751
>gi|18860916|ref|NP_036387.2| 5'-3' exoribonuclease 2 [Homo sapiens]
gi|30173484|sp|Q9H0D6.1|XRN2_HUMAN RecName: Full=5'-3' exoribonuclease 2; AltName: Full=DHM1-like
protein; Short=DHP protein
gi|12053189|emb|CAB66775.1| hypothetical protein [Homo sapiens]
gi|119630591|gb|EAX10186.1| 5'-3' exoribonuclease 2, isoform CRA_a [Homo sapiens]
gi|182888117|gb|AAI60100.1| 5'-3' exoribonuclease 2 [synthetic construct]
Length = 950
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/796 (48%), Positives = 501/796 (62%), Gaps = 52/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S P+ SF +D + L + R D+ + P
Sbjct: 472 PSISPN-------------------TSFTSDGS------PSPLGGIKRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
LFV HPL I L Q E VEV PEL G+ G S P +
Sbjct: 684 LFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLDEEAILPDQIV 735
Query: 774 RSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 736 CSPVPMLRDLTQNTVV 751
>gi|193786052|dbj|BAG50941.1| unnamed protein product [Homo sapiens]
Length = 950
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/796 (48%), Positives = 501/796 (62%), Gaps = 52/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S P+ SF +D + L + R D+ + P
Sbjct: 472 PSISPN-------------------TSFTSDGS------PSPLGGIKRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
LFV HPL I L Q E VEV PEL G+ G S P +
Sbjct: 684 LFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLDEEAILPDQIV 735
Query: 774 RSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 736 CSPVPMLRDLTQNTVV 751
>gi|351715914|gb|EHB18833.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 950
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/791 (48%), Positives = 496/791 (62%), Gaps = 42/791 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAIEKQRVREEIMAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE GD + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELGDSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
++ + +R QP + P L S SP G S P
Sbjct: 420 EKRKRMKRD-------QP-AFTPSGILTPHALGSRNSP--------------GSQVSSNP 457
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+ T + V SF +D + L + R D+ + P ED V+
Sbjct: 458 RQAAYEMRMQTNSSPSVSPNTSFTSDGS------PSPLGGIKRKAEDSDSEPEP-EDNVR 510
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HY
Sbjct: 511 LWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHY 568
Query: 601 APFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
APFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DF
Sbjct: 569 APFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDF 628
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ AD+LFV
Sbjct: 629 YPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGADVLFVGK 688
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVA 778
H L I L Q E V+V PEL G+ G S P V SPV
Sbjct: 689 HHQLHDFISEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAVLPDQVVCSPVP 740
Query: 779 SMEDIMGNQVL 789
+ D+ N +
Sbjct: 741 MLRDLTQNTAI 751
>gi|149408751|ref|XP_001505862.1| PREDICTED: 5'-3' exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 950
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/768 (48%), Positives = 494/768 (64%), Gaps = 51/768 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP +V + +EE+P +GVKIPVDTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIVVNCVEEKPKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ A++ E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGAEATVEKQRVREEILAKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNN+PGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNEPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +C+G A+ K GEFDE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQLGHEVKDCQGLAREKQGEFDELADSLPCSEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ +L + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIYLRLNVLREYLEKELTMASLPFPFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR + R K
Sbjct: 360 IDRLVNIYKSVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEENFKRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVP-----VSRFHGSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---HPAFTPGGILTPQPLGAKNSSGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S P+ SF +D + +K + D +S+
Sbjct: 472 PSASPN-------------------TSFTSDGSPSP---AGGIKRKVEDS----DSEPEP 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + FE G PF+P QL+GVFP+AS + LP +RKLM+DP S
Sbjct: 564 YPFHYAPFASDFEGIADMPSDFEKGTKPFRPLEQLMGVFPAASGNFLPPSWRKLMSDPES 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT +E RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDENRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
LFV HPL + L + E V++ PEL G+ G ++
Sbjct: 684 LFVGKHHPLCDFLSEL----YKTSSAEPVDIP----PELCHGIQGQLT 723
>gi|291388948|ref|XP_002710988.1| PREDICTED: 5'-3' exoribonuclease 2 [Oryctolagus cuniculus]
Length = 950
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/797 (48%), Positives = 501/797 (62%), Gaps = 54/797 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
S P+ S + IG +AE+S +S+
Sbjct: 472 PSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPE 504
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 505 PEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKW 562
Query: 595 FYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+
Sbjct: 563 YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPD 622
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D
Sbjct: 623 SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGD 682
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PV 772
+LFV HPL I L Q E V+V PEL G+ G S P V
Sbjct: 683 VLFVGKHHPLHDFILEL----YQTGSAEPVDVP----PELCHGIQGKFSLDEEAILPDQV 734
Query: 773 FRSPVASMEDIMGNQVL 789
SPV + D+ N +
Sbjct: 735 VCSPVPMLRDLTQNTAI 751
>gi|402883351|ref|XP_003905183.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Papio anubis]
gi|355784737|gb|EHH65588.1| 5'-3' exoribonuclease 2 [Macaca fascicularis]
gi|380810654|gb|AFE77202.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|383416591|gb|AFH31509.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|384945858|gb|AFI36534.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 950
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/797 (48%), Positives = 501/797 (62%), Gaps = 54/797 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
S P+ S + IG +AE+S +S+
Sbjct: 472 PSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPE 504
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 505 PEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKW 562
Query: 595 FYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+
Sbjct: 563 YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPD 622
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D
Sbjct: 623 SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGD 682
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PV 772
+LFV HPL I L Q E V+V PEL G+ G S P +
Sbjct: 683 VLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQI 734
Query: 773 FRSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 735 VCSPVPMLRDLTQNTVV 751
>gi|114681219|ref|XP_514546.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 7 [Pan troglodytes]
gi|397478693|ref|XP_003810674.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Pan paniscus]
gi|410223814|gb|JAA09126.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410252370|gb|JAA14152.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410308366|gb|JAA32783.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410334533|gb|JAA36213.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 950
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/796 (48%), Positives = 501/796 (62%), Gaps = 52/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S P+ SF +D + L + R D+ + P
Sbjct: 472 PSISPN-------------------TSFTSDGS------PSPLGGIKRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
LFV HPL I L Q E V+V PEL G+ G S P +
Sbjct: 684 LFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQIV 735
Query: 774 RSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 736 CSPVPMLRDLTQNTVV 751
>gi|332238204|ref|XP_003268293.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Nomascus leucogenys]
Length = 950
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/797 (48%), Positives = 501/797 (62%), Gaps = 54/797 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
S P+ S + IG +AE+S +S+
Sbjct: 472 PSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPE 504
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 505 PEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKW 562
Query: 595 FYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+
Sbjct: 563 YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPD 622
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D
Sbjct: 623 SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGD 682
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PV 772
+LFV HPL I L Q E V+V PEL G+ G S P +
Sbjct: 683 VLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGRFSLDEEAILPDQI 734
Query: 773 FRSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 735 VCSPVPMLRDLTQNTVV 751
>gi|73991017|ref|XP_534324.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Canis lupus
familiaris]
Length = 950
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/799 (48%), Positives = 503/799 (62%), Gaps = 58/799 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-------ARLHQ 413
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R +
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
+R+KR++ G + P A P GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRDQPAFSPGGILTPHALGSRNSP-----GSQVASNPRQAAYEM-----RMQNN 469
Query: 474 KGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD 532
S P+ S + IG +AE+S +S+
Sbjct: 470 SSPSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSE 502
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW
Sbjct: 503 PEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASW 560
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+D
Sbjct: 561 KWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSD 620
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
P+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +RNS+
Sbjct: 621 PDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLG 680
Query: 712 ADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP- 770
D+LFV HPL I L Q E V+V PEL G+ G S P
Sbjct: 681 GDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAVLPD 732
Query: 771 PVFRSPVASMEDIMGNQVL 789
+ SPV + D+ N +
Sbjct: 733 QIVCSPVPMLRDLTQNAAI 751
>gi|403283597|ref|XP_003933201.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 950
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/797 (48%), Positives = 501/797 (62%), Gaps = 54/797 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ S++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPTGILTPHALGSRNSPSSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
S P+ S + IG +AE+S +S+
Sbjct: 472 PSVSPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPE 504
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 505 PEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKW 562
Query: 595 FYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+
Sbjct: 563 YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPD 622
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D
Sbjct: 623 SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGD 682
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP-V 772
+LFV HPL I L Q E V+V PEL G+ G S P +
Sbjct: 683 VLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDRI 734
Query: 773 FRSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 735 VCSPVPMLRDLTQNTVV 751
>gi|301620220|ref|XP_002939479.1| PREDICTED: 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
gi|89271859|emb|CAJ82319.1| 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 931
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/789 (47%), Positives = 500/789 (63%), Gaps = 53/789 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +EE+P + +KIPVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHSVEEKPKECNNIKIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ +S+ E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGVESSEEKQRIREEVLSKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+VPGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LCGQ GH C+G + K GE DE D ++
Sbjct: 241 LATHEPYFTIIRE-EFKPNKPKPCGLCGQFGHEIKECQGMPREKKGEHDEFADTPPGCEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF+ D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLNVLREYLEKELTMASLPFQFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLTD +L RV+ + AVG ED IF+KR + H +R +
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTDSGFVNLERVQMIMLAVGEVEDNIFKKR-KEDDEHFKRRQ 418
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+E+ + + + +P S V +F +P Q C
Sbjct: 419 KERKKRMKAEHQKP-----SFVTSGQF---------APRALGQGSC-------------- 450
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
VP + A + +N+ D A + K++ +S+ ED ++
Sbjct: 451 -SVPEAINNPRQEAYRMRMQNAHSVD--------NASPNTGQKRKAEGSDSEPEPEDNIR 501
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+WF+P+HY
Sbjct: 502 LWEEGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWFFPFHY 559
Query: 601 APFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
APFASD +++ FE G PFKP QL+GVFP+AS + LPE +R+LM DP+S I DF
Sbjct: 560 APFASDFENISCLFKEFEKGTKPFKPLEQLMGVFPAASGNFLPESWRRLMNDPDSSIIDF 619
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+++WQG+A LPF+DE RL ++++ LT +E RRNS+ D +FV
Sbjct: 620 YPDDFAIDLNGKKFAWQGVALLPFVDERRLRAALEEVYPDLTPDETRRNSLGGDSIFVGE 679
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSPV 777
SHPL+ I+ L + ++ PEL G+ G + DP P + SPV
Sbjct: 680 SHPLNDFIHEL--------YRANTTEATQIPPELCHGIQGKVQ-LEEDPILPNKIIESPV 730
Query: 778 ASMEDIMGN 786
+ D+ N
Sbjct: 731 PLLRDLSQN 739
>gi|344279981|ref|XP_003411764.1| PREDICTED: 5'-3' exoribonuclease 2 [Loxodonta africana]
Length = 950
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/794 (48%), Positives = 504/794 (63%), Gaps = 48/794 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKRGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YKK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKKVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS-PSPYQQSECVGRLDNGKGTSGR 479
++ + +R +P P ++ + GSR + G + +Q+ R+ N S
Sbjct: 420 EKRKRMKRD---QPAFTPGGIL-TPQALGSRNSPGSQVANNARQAAYEMRMHNNSSPSVS 475
Query: 480 PH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
P+ S + IG +AE+S +S+ ED
Sbjct: 476 PNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPEPEDN 508
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+
Sbjct: 509 VRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPF 566
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I
Sbjct: 567 HYAPFASDFEGIASMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSII 626
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +RNS+ D+LFV
Sbjct: 627 DFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 686
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRS 775
HPL I L Q E VEV PEL G+ G S G+ P + S
Sbjct: 687 GKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIRGKFS-LDGEAVLPDQIVCS 737
Query: 776 PVASMEDIMGNQVL 789
PV + D+ N +
Sbjct: 738 PVPLLRDLSHNTAI 751
>gi|335304534|ref|XP_003134355.2| PREDICTED: 5'-3' exoribonuclease 2 [Sus scrofa]
Length = 950
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/798 (47%), Positives = 504/798 (63%), Gaps = 56/798 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPSAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-------ARLHQ 413
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R +
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
+R+KR++ G + P A P GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRDQPSFSPGGILTPHALGSRNSP-----GSQVASNPRQAAYEM-----RMQNN 469
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
S V SF +D + + ++ K++ +S+
Sbjct: 470 SSPS-------------------VSPNTSFISDGSPSP-------RGGIKRKAEDSDSEP 503
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+
Sbjct: 504 EPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWK 561
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP
Sbjct: 562 WYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDP 621
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGG 681
Query: 713 DMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-P 771
D+LFV HPL + L + E V+V PEL G+ G S P
Sbjct: 682 DVLFVGKHHPLHDFVLEL----YKTGSTESVDVP----PELCHGIQGKFSLDEEAILPDQ 733
Query: 772 VFRSPVASMEDIMGNQVL 789
V SPV + D+ N +
Sbjct: 734 VVCSPVPMLRDLTQNGTI 751
>gi|197100138|ref|NP_001126942.1| 5'-3' exoribonuclease 2 [Pongo abelii]
gi|75040978|sp|Q5R4L5.1|XRN2_PONAB RecName: Full=5'-3' exoribonuclease 2
gi|55733236|emb|CAH93301.1| hypothetical protein [Pongo abelii]
Length = 950
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/797 (48%), Positives = 501/797 (62%), Gaps = 54/797 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K + DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLLREKKVKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
S P+ S + IG +AE+S +S+
Sbjct: 472 PSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPE 504
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
ED V+L E GWK+RYY+ KF+A +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 505 PEDNVRLWEAGWKQRYYKNKFDADAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKW 562
Query: 595 FYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+
Sbjct: 563 YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPD 622
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D
Sbjct: 623 SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGD 682
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PV 772
+LFV HPL I L Q E V+V PEL G+ G S P +
Sbjct: 683 VLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQI 734
Query: 773 FRSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 735 VCSPVPMLRDLTQNTVV 751
>gi|296200314|ref|XP_002747533.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Callithrix jacchus]
Length = 950
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/797 (48%), Positives = 499/797 (62%), Gaps = 54/797 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY-----QQSECVGRLDNGKG 475
++ + +R QP + P L S SPS +Q+ R+ N
Sbjct: 420 EKRKRMKRD-------QP-AFTPTGILTPHALGSRNSPSSQVANNPRQAAYEMRMQNNSS 471
Query: 476 TSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
S P+ S + IG +AE+S +S+
Sbjct: 472 PSVSPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPE 504
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 505 PEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKW 562
Query: 595 FYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+
Sbjct: 563 YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPD 622
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D
Sbjct: 623 SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGD 682
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PV 772
+LFV HPL I L Q E V+V PEL G+ G S P +
Sbjct: 683 VLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQI 734
Query: 773 FRSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 735 VCSPVPMLRDLTQNTVV 751
>gi|281339379|gb|EFB14963.1| hypothetical protein PANDA_012248 [Ailuropoda melanoleuca]
Length = 929
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/793 (48%), Positives = 500/793 (63%), Gaps = 46/793 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS-PSPYQQSECVGRLDNGKGTSGR 479
++ + +R +P P ++ GSR + G S +Q+ R+ N S
Sbjct: 420 EKRKRMKRD---QPAFSPGGIL-TPHALGSRNSPGSQVASNLRQAAYEMRMQNNSSPSVS 475
Query: 480 PH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
P+ S + IG +AE+S +S+ ED
Sbjct: 476 PNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPEPEDN 508
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+
Sbjct: 509 VRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPF 566
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I
Sbjct: 567 HYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSII 626
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +RNS+ D+LFV
Sbjct: 627 DFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 686
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSP 776
HPL I L Q E V+V PEL G+ G S P + SP
Sbjct: 687 GKHHPLHDFILEL----YQTGSTELVDVP----PELCHGIQGKFSLDEEAVLPDQIVCSP 738
Query: 777 VASMEDIMGNQVL 789
V + D+ N +
Sbjct: 739 VPMLRDLTQNTAI 751
>gi|148696569|gb|EDL28516.1| 5'-3' exoribonuclease 2, isoform CRA_d [Mus musculus]
Length = 1002
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/768 (48%), Positives = 490/768 (63%), Gaps = 51/768 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 20 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 79
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 80 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 139
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 140 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 199
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 200 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 259
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 260 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 318
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 319 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 378
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 379 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 438
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ G ++AS P + Y+ R+
Sbjct: 439 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEM-----RMQRNSS 490
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S P+ SF +D + L + R D+ + P
Sbjct: 491 PSISPN-------------------TSFASDGS------PSPLGGIKRKAEDSDSEPEP- 524
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 525 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 582
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 583 YPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDS 642
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 643 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDV 702
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 703 LFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFS 742
>gi|395851965|ref|XP_003798517.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 951
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/770 (48%), Positives = 491/770 (63%), Gaps = 54/770 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+ +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKSKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAALEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGWE + VILSDA+VPGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALSSRNSPGSQVASNPRHAAYEM-----RMQNNNC 471
Query: 476 TSGRPHKVPRLSSG--ATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
+ S G + +G +AE+S +S+
Sbjct: 472 SPSISPNTSFTSDGSPSPVGGIKRKAEDS---------------------------DSEP 504
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+
Sbjct: 505 EPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWK 562
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP
Sbjct: 563 WYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDP 622
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +RNS+ +
Sbjct: 623 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGS 682
Query: 713 DMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 683 DVLFVGKRHPLHDFIVEL----YQTGSTEPVDVP----PELCHGIQGKFS 724
>gi|301775465|ref|XP_002923152.1| PREDICTED: 5'-3' exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 950
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/793 (48%), Positives = 500/793 (63%), Gaps = 46/793 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS-PSPYQQSECVGRLDNGKGTSGR 479
++ + +R +P P ++ GSR + G S +Q+ R+ N S
Sbjct: 420 EKRKRMKRD---QPAFSPGGIL-TPHALGSRNSPGSQVASNLRQAAYEMRMQNNSSPSVS 475
Query: 480 PH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
P+ S + IG +AE+S +S+ ED
Sbjct: 476 PNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPEPEDN 508
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+
Sbjct: 509 VRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPF 566
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I
Sbjct: 567 HYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSII 626
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +RNS+ D+LFV
Sbjct: 627 DFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFV 686
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSP 776
HPL I L Q E V+V PEL G+ G S P + SP
Sbjct: 687 GKHHPLHDFILEL----YQTGSTELVDVP----PELCHGIQGKFSLDEEAVLPDQIVCSP 738
Query: 777 VASMEDIMGNQVL 789
V + D+ N +
Sbjct: 739 VPMLRDLTQNTAI 751
>gi|348581480|ref|XP_003476505.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cavia porcellus]
Length = 950
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/791 (48%), Positives = 495/791 (62%), Gaps = 42/791 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVK+PVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKVPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
++ + +R QP + P L S SP G + P
Sbjct: 420 EKRKRMKRD-------QP-AFTPSGILTPHALGSRNSP--------------GSQVASNP 457
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+ T + V SF +D + L + R D+ + P ED V+
Sbjct: 458 RQAAYEMRMQTNSSPSVSPNTSFTSDGS------PSPLGGIKRKAEDSDSEPEP-EDNVR 510
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HY
Sbjct: 511 LWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHY 568
Query: 601 APFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
APFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DF
Sbjct: 569 APFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDF 628
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV
Sbjct: 629 YPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVLFVGK 688
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVA 778
HPL I L + E V+V PEL G+ G S P V SPV
Sbjct: 689 HHPLHDFISEL----YRTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQVVCSPVP 740
Query: 779 SMEDIMGNQVL 789
+ D+ N +
Sbjct: 741 MLRDLAQNTAI 751
>gi|117606214|ref|NP_036047.2| 5'-3' exoribonuclease 2 [Mus musculus]
gi|30173483|sp|Q9DBR1.1|XRN2_MOUSE RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein Dhm1
gi|12836253|dbj|BAB23573.1| unnamed protein product [Mus musculus]
gi|26343603|dbj|BAC35458.1| unnamed protein product [Mus musculus]
gi|32451718|gb|AAH54743.1| 5'-3' exoribonuclease 2 [Mus musculus]
gi|74188828|dbj|BAE39193.1| unnamed protein product [Mus musculus]
gi|148696571|gb|EDL28518.1| 5'-3' exoribonuclease 2, isoform CRA_f [Mus musculus]
Length = 951
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/768 (48%), Positives = 492/768 (64%), Gaps = 51/768 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ G ++AS P + Y+
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEM------------ 464
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
++ R SS + + SF +D + L + R D+ + P
Sbjct: 465 ------RMQRNSSPS------ISPNTSFASDGS------PSPLGGIKRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 684 LFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFS 723
>gi|301069399|ref|NP_001001944.2| 5'-3' exoribonuclease 2 [Danio rerio]
Length = 952
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/789 (47%), Positives = 487/789 (61%), Gaps = 36/789 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +EE+ +GVKIPVDTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCLEEKAKEYNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ + A E++++R+E G LPP+ + FDSN ITPGTEFM L+ L+YY+
Sbjct: 121 ASKEGVELAEEKQKMREEVIERGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYVAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RL NDPGW I V LSDA+VPGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLTNDPGWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +C+G + K GE DE D + V ++
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPRPCALCSQMGHEIKDCQGLPREKQGEHDEFADTIPVSEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLAVLREYLERELTMASLPFPFSFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L RVE +QAVG ED IF+KR + E K
Sbjct: 360 IDRLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKR----KEDDESFK 415
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
R ++ E Q S +P +F L P Q + +G
Sbjct: 416 RRMKDKKKRMKAE---QRPSFLPGGQFAPHALGGRDRPMAVQNARHAAFEMRMQGNQRNQ 472
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
L + G E+ S + ++ K+D +S+ ED V+
Sbjct: 473 DAAQSLRAMMRNGKGSAESSGSMDN--------------RGVKRKADDSDSEPEPEDNVR 518
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E GWK+RYY+ KF+ + +E RK VV Y EGLCWV+ YYY+G SW+W++P+HY
Sbjct: 519 LWEDGWKQRYYKTKFDVDATD--DEFRKKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHY 576
Query: 601 APFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
APFASD KD+ FE G PFKP QL+GVFP+AS + LP +R LM+DP S I DF
Sbjct: 577 APFASDFKDIKGMFSDFEKGTKPFKPLEQLMGVFPAASGNFLPTTWRALMSDPESSIIDF 636
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ + LT EE RRNS+ +D++FV
Sbjct: 637 YPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYNDLTPEEVRRNSLGSDVMFVGR 696
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSPV 777
SH L I L + + E G+ G ++ DP P + SP+
Sbjct: 697 SHALCDFIQEL--------YRAESHTATEIPAEFCHGIQGILN-LDEDPILPDKLVESPI 747
Query: 778 ASMEDIMGN 786
+ DI N
Sbjct: 748 PVLRDISSN 756
>gi|432946152|ref|XP_004083793.1| PREDICTED: 5'-3' exoribonuclease 2-like [Oryzias latipes]
Length = 972
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/792 (47%), Positives = 503/792 (63%), Gaps = 45/792 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +EE+ +GV+IPVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ + E++R+R+E + G LPP+ + FDSN ITPGTEFM L+ L+YY+
Sbjct: 121 ASKEGVELVDEKQRMREEIIQRGGYLPPEEIKERFDSNCITPGTEFMDNLAHCLRYYVAE 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RL+NDPGW+ + V LSDA+VPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLSNDPGWKNVVVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LCGQ GH +C+G A+ K G+ DE D + V ++
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPRPCSLCGQTGHEMKDCQGVAREKQGQHDEFADTMPVSEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLCVLREYLERELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT +L RVE +QAVG ED IF+KR + E +
Sbjct: 360 IDRLVNIYKDVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKR----KEDEENFR 415
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
R + R+ VE Q + + +F L P P Q N + +
Sbjct: 416 RRNKEKRKRMKVE--QQGPAYLTTGQFAPQALGRRDVPEPIQ---------NARHQAYDM 464
Query: 481 HKVPRLSSGATIG---AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
PR + A++ E S + E+++ + + K++ +SD ED
Sbjct: 465 RMNPREQNNKNAAQSLKAMLRNEGSSSSGANESQD------RRAPKRKAEDSDSDPEPED 518
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
V+L E GWK+RYY+ KF+ + + RK VV Y EGLCWV+ YYY+G SW+W++P
Sbjct: 519 NVRLWEDGWKQRYYKNKFDVDVTD--SDFRKKVVQSYVEGLCWVLRYYYQGCASWKWYFP 576
Query: 598 YHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
+HYAPFASD KD+ + FE PFKP QL+ VFP+AS + LP +R LM P S I
Sbjct: 577 FHYAPFASDFKDIKEMFTEFEKDTMPFKPLEQLMSVFPAASGNFLPPTWRNLMVSPESSI 636
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ LT EEARRNS+ +D+LF
Sbjct: 637 IDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPDLTPEEARRNSLGSDVLF 696
Query: 717 VLLSHPLSASIYTL-DEHCKQLKIKERVEVKERLNPELSDGMNGYI----SPCAGDPHPP 771
V SHPL I+ L + C + + + PEL G+ G + +P P P
Sbjct: 697 VGKSHPLYDFIHELYRDECNKGTV---------VPPELCFGIQGLLNLDNNPVL--PDKP 745
Query: 772 VFRSPVASMEDI 783
V +SP+ ++ DI
Sbjct: 746 V-KSPIPTLRDI 756
>gi|74207538|dbj|BAE40020.1| unnamed protein product [Mus musculus]
Length = 951
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/768 (48%), Positives = 491/768 (63%), Gaps = 51/768 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRPNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVP-----VSRFHGSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ G ++AS P + Y+
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTHHALGSRNSQGCQVASNPRQAAYEM------------ 464
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
++ R SS + + SF +D + L + R D+ + P
Sbjct: 465 ------RMQRNSSPS------ISPNTSFASDGS------PSPLGGIKRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 684 LFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFS 723
>gi|5881961|gb|AAD55138.1|AF064257_1 Dhm1-like protein [Homo sapiens]
Length = 950
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/796 (47%), Positives = 498/796 (62%), Gaps = 52/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPR KMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRVKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A K ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 AIKRGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG ++ K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYDM-----RMQNNSS 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S P+ SF +D + L + R D+ + P
Sbjct: 472 PSISPN-------------------TSFTSDGS------PSPLGGIKRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
LFV HPL I L Q E VEV PEL G+ G S P +
Sbjct: 684 LFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLDEEAILPDQIV 735
Query: 774 RSPVASMEDIMGNQVL 789
+PV + D+ N V+
Sbjct: 736 CAPVPMLRDLTQNTVV 751
>gi|327270678|ref|XP_003220116.1| PREDICTED: 5'-3' exoribonuclease 2-like [Anolis carolinensis]
Length = 957
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/792 (47%), Positives = 492/792 (62%), Gaps = 43/792 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ EE+P +GVKIPVDTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCTEEKPKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ + A E++R+R+E R+G LPP+ + FDSN ITPGTEFM L+ L+YY+
Sbjct: 121 ASKEGVEGAEEKQRIREEIMRKGGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYVAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LCGQ GH C+G K K GE D+ D ++
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCGQFGHEVKECQGLPKEKQGEHDQFADSPPGMEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + L+EYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLCVLKEYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR + R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTENGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEENFKRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
++ + +R Q P G+R + P +P + + D T
Sbjct: 420 EKRKRMKREQHSMAGGQ---FTPQPLGRGNRSSHQPISNPRHTAYEMRMQDRQNTTPSAS 476
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
S G A + + K++ +S+ ED V+
Sbjct: 477 PNTSFTSDGTPSPAGGI-------------------------KRKAEDSDSEPEPEDNVR 511
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E GWK+RYY+ KF+ +++ R VV Y EGLCWV+ YYY+G SW+W+YP+HY
Sbjct: 512 LWEAGWKQRYYKNKFDVDVNDKK--FRHKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHY 569
Query: 601 APFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
APFASD + + FE G PFKP QL+GVFP+AS + LP +RKLMTDP S I DF
Sbjct: 570 APFASDFEGIADMFSDFEKGTKPFKPLEQLMGVFPAASGNFLPVTWRKLMTDPESSIIDF 629
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ LT EE RRNS+ D+LFV
Sbjct: 630 YPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPDLTPEEKRRNSLGGDVLFVGK 689
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSPV 777
HPL I +Q K E+ V + PEL G+ G ++ +P P SPV
Sbjct: 690 HHPLHDFI------LEQYKSDEKQAVG--MPPELCHGIQGKLT-LNENPVLPDETVHSPV 740
Query: 778 ASMEDIMGNQVL 789
+ D+ N +
Sbjct: 741 PVLRDLTQNTAI 752
>gi|26327149|dbj|BAC27318.1| unnamed protein product [Mus musculus]
Length = 952
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/768 (48%), Positives = 491/768 (63%), Gaps = 51/768 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ G ++AS P + Y+
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEM------------ 464
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
++ R SS + + SF +D + L + R D+ + P
Sbjct: 465 ------RMQRNSSPS------ISPNTSFASDGS------PSPLGGIKRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
LFV HPL I L Q E V+V EL G+ G S
Sbjct: 684 LFVGKLHPLRDFILEL----YQTGSTEPVDVPH----ELCHGIQGTFS 723
>gi|387015832|gb|AFJ50035.1| 5'-3' exoribonuclease 2-like [Crotalus adamanteus]
Length = 945
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/792 (47%), Positives = 506/792 (63%), Gaps = 43/792 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ EE+ +G+KIPVDTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCTEEKAKEYNGIKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ +S E++R+RQE +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMESVEEKQRIRQEIMEKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +C+G K K GE D+ D ++
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHETKDCQGLPKEKQGEHDQFADCPPGMEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLCVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L RV+ + AVG ED IF+KR + + + +R +
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTENGYVNLERVQMIMLAVGEVEDSIFKKR-KDDEENFKRRQ 418
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+EK + + + L + P+ R G+R + P +P + + D R
Sbjct: 419 KEKRKRMKREQHTMLGGQYTPQPLGR--GNRSSHQPISNPRHTAYEMRMQD-------RQ 469
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+ P +S A +SF +D + ++ K++ +S+ ED V+
Sbjct: 470 NTTPSVS-----------ANSSFTSDG-------TSSTTGGIKRKTEDSDSEPEPEDNVR 511
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E GWK+RYY+ KF+ +++ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HY
Sbjct: 512 LWEAGWKQRYYKNKFDVDVNDKK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHY 569
Query: 601 APFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
APFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DF
Sbjct: 570 APFASDFEGIADLVSDFEKGTKPFKPLEQLMGVFPAASGNFLPLTWRKLMSDPDSSIIDF 629
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ LT EE RRNS+ D+LFV
Sbjct: 630 YPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALAQVYPNLTSEEMRRNSLGGDVLFVGK 689
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSPV 777
H L I +Q K E+ V + PEL G+ G I+ +P P +SPV
Sbjct: 690 HHQLHDFI------LEQYKSNEKEPVD--IAPELCHGIQGKIT-LDENPILPDKAVQSPV 740
Query: 778 ASMEDIMGNQVL 789
+ D+ N +
Sbjct: 741 PLLRDLTQNSAI 752
>gi|149041185|gb|EDL95118.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 951
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/763 (48%), Positives = 487/763 (63%), Gaps = 41/763 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
++ + +R +P P ++ +PY R G + P
Sbjct: 420 EKRKRMKRD---QPAFTPSGIL----------------TPYALG---SRNSPGCQVASNP 457
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+ + + + SF +D + L L R D+ + P ED V+
Sbjct: 458 RQAAYEMRMQSNSSPSISPNTSFASDGS------PSPLGGLKRKAEDSDSEPEP-EDNVR 510
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HY
Sbjct: 511 LWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHY 568
Query: 601 APFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
APFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DF
Sbjct: 569 APFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDF 628
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ +D+LFV
Sbjct: 629 YPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGSDVLFVGK 688
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
HPL I L Q E V+V PEL G+ G S
Sbjct: 689 VHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFS 723
>gi|71895763|ref|NP_001026204.1| 5'-3' exoribonuclease 2 [Gallus gallus]
gi|75571238|sp|Q5ZIP4.1|XRN2_CHICK RecName: Full=5'-3' exoribonuclease 2
gi|53135140|emb|CAG32399.1| hypothetical protein RCJMB04_24h23 [Gallus gallus]
Length = 949
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/795 (47%), Positives = 496/795 (62%), Gaps = 51/795 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+ +GVK VDTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKASVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++++RQE +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN+DPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE HF+I+RE F P + C LC Q GH +C+G + K G+ D+ D + ++
Sbjct: 241 LATHEPHFTIIRE-EFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPASEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP----SPYQQSECVGRLDNGKGT 476
+K + +R S +P +F L + SP +P Q + + D T
Sbjct: 420 EKKKRMKRDH--------PSFIPGGQFSPQALGNRSSPQAISNPRQTAFEMRMHDRQNST 471
Query: 477 SGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
P+ L+S + A ++ KS+ +S+ E
Sbjct: 472 MSSPNT--SLNSDGSPSPA------------------------RGIKRKSEDSDSEPEPE 505
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D ++L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW W+Y
Sbjct: 506 DNIRLWESGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYYYQGCASWNWYY 563
Query: 597 PYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
P+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLMTDP S
Sbjct: 564 PFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPESS 623
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+L
Sbjct: 624 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 683
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFR 774
FV HPL I +Q K K V + PEL G+ G ++P P
Sbjct: 684 FVGKHHPLCDFI------VEQYKSKNTEPVD--MPPELCYGIQGKLTPNENAVLPDKTVE 735
Query: 775 SPVASMEDIMGNQVL 789
SPV + D+ N +
Sbjct: 736 SPVPMLRDLTQNSAV 750
>gi|392884414|gb|AFM91039.1| 5'-3' exoribonuclease 2 [Callorhinchus milii]
Length = 952
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/797 (46%), Positives = 498/797 (62%), Gaps = 55/797 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP +V +EE ++GVKIPVDTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIVVHCLEERVKEVNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++ AP DE+ +F+YIDRLF ++RPR+LLYMAIDGVAPRAKMNQQR RRFR
Sbjct: 61 PCTHPENKAAPKNEDEMMVAIFEYIDRLFNILRPRRLLYMAIDGVAPRAKMNQQRPRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ + AE+ R+R+E +G L + + FD N ITPGTEFM L+ +L+YY+
Sbjct: 121 ASKEGVELLAEKTRMREEVISKGGFLSEEVIKERFDGNCITPGTEFMDNLARSLRYYVAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+VPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE-KGDEVVVPK 299
LATHE +F+I+RE F P Q C LCGQ GH C+G K K G+FD+ G+ V +
Sbjct: 241 LATHEPNFTIIREE-FKPNQPRPCALCGQIGHEIKECQGLPKDKQGQFDQFAGNSAGVEE 299
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 300 QEFIFIRLTVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 359
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR----LHQRH 415
AI+ L+ +YK GGYLT+ +L RV+ + AVG ED IF+KR QR
Sbjct: 360 AIDRLVGIYKNVVHKTGGYLTENGFVNLERVQLIMIAVGEAEDNIFKKRREDDVLFRQRQ 419
Query: 416 AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKG 475
E+ KR K S +P ++ SP QS
Sbjct: 420 KEKNKRLKGNR------------PSFIPGGQY---------SPQALGQSS---------- 448
Query: 476 TSGRPHKV--PRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
GRP + PR + + + +N + N + L + K++ + +
Sbjct: 449 GGGRPQAIQNPR-QTAFEMRVKDRDPQNRASSQNSANSDGSPVPLG--TKRKNEDSDEEQ 505
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
D ++L E GWK+RYY+ KF+ + + R+ VV Y EGLCWV+ YYY+G SW+
Sbjct: 506 EPSDNIRLWEEGWKQRYYKNKFDVDATDAK--FRRKVVEAYVEGLCWVLQYYYQGCASWK 563
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
WF+P+HYAPFASD D+ + +FE G PFKP QL+GVFP+AS + LPE +R LM+ P
Sbjct: 564 WFFPFHYAPFASDFTDIKELPTTFEKGTKPFKPLEQLMGVFPAASGNFLPETWRYLMSYP 623
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
NS I DFYP DF +D+NGK+++WQG+A LPF+DE RL ++K+ LT +E RRNS+ +
Sbjct: 624 NSSIIDFYPDDFALDLNGKKFAWQGVALLPFVDERRLRGALEKVYPDLTSDETRRNSLGS 683
Query: 713 DMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-P 771
D+LFV SH L I + ++ Q + +L PEL G+ G ++ + P
Sbjct: 684 DILFVANSHKLFDFIVEMQKNDSQ---------ELQLPPELCHGIGGLLTSESDAVKPGQ 734
Query: 772 VFRSPVASMEDIMGNQV 788
+ SPV +++DI N V
Sbjct: 735 IVVSPVPTLKDINENNV 751
>gi|126303629|ref|XP_001373979.1| PREDICTED: 5'-3' exoribonuclease 2 [Monodelphis domestica]
Length = 947
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/796 (46%), Positives = 497/796 (62%), Gaps = 52/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVDTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ +S E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMESTIEKQRVREEILSKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +C+G + K GE D+ + + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQLGHEVKDCQGLPREKQGEHDQFEESLPASEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ ++ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIYIRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR + R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEESFKRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVP-----VSRFHGSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ HGS++AS P + ++ R+ N
Sbjct: 420 EKRKRMKRD---QPAFVPSGILTPQALGTRNSHGSQVASNPRQAAFEM-----RMHNNSS 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
P+ + G I +++P+
Sbjct: 472 PLTSPNTSFTSDGSPSPGGGIKRKAEDSDSEPE--------------------------P 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +++ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWESGWKQRYYKNKFDVDAADDK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + FE G PFKP QL+GVFP+AS + LP +RKLM+DP S
Sbjct: 564 YPFHYAPFASDFDGIADMPSDFEKGTRPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPES 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT +E RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDETRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
+FV HPL + L + E V+ L PEL G+ G ++ P +
Sbjct: 684 MFVGKHHPLCDFLSEL----YKTGSTEAVD----LPPELCHGIQGKLTLHKEAILPDQIV 735
Query: 774 RSPVASMEDIMGNQVL 789
SPV + D+ N +
Sbjct: 736 YSPVPVLRDLTQNTAI 751
>gi|224047545|ref|XP_002199834.1| PREDICTED: 5'-3' exoribonuclease 2 [Taeniopygia guttata]
Length = 949
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/796 (46%), Positives = 500/796 (62%), Gaps = 52/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+ +GVK+P+DTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKVPIDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDR+F +VR R+LLYMAID APRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRQRRLLYMAIDXXAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++++RQE +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAEEKQKIRQEILAKGGYLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN++PGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNSNPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE++F+I+RE F P + C LC Q GH +C+G + K G+ D+ D + V ++
Sbjct: 241 LATHELNFTIIRE-EFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADTLPVSEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY---QQSECVGRLDNGKG-- 475
++ + +R QP S +P +F L + SP +Q+ R+ + +
Sbjct: 420 EKRKRLKRD-------QP-SFIPGGQFSPQALGNRSSPQAICNPRQAAFEMRMHDRQNST 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
TS P+ ++G I +++P+
Sbjct: 472 TSASPNTSLTPDGSPSLGGGIKRKPEDSDSEPE--------------------------P 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED ++L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW W+
Sbjct: 506 EDNIRLWETGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYYYQGCASWNWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLMTDP S
Sbjct: 564 YPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPES 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE+RRNS+ +D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEESRRNSLGSDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
LFV HPL I +Q K K V + PEL G+ G ++ P V
Sbjct: 684 LFVGKHHPLCDFI------VEQYKTKNTEAVD--IPPELCHGIQGKLTLNNNAVLPDQVV 735
Query: 774 RSPVASMEDIMGNQVL 789
+SPV + D+ N +
Sbjct: 736 QSPVPMLRDLTQNSAV 751
>gi|348518303|ref|XP_003446671.1| PREDICTED: 5'-3' exoribonuclease 2 [Oreochromis niloticus]
Length = 982
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/795 (46%), Positives = 499/795 (62%), Gaps = 42/795 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +EE+ +GV+IPVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ + E+ R+R+E ++G LPP+ + FDSN ITPGTEFM L+ L+YY+
Sbjct: 121 ASKEGVELVEEKSRVREEVIQKGGYLPPEEIKERFDSNCITPGTEFMDNLAQCLRYYVAE 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RL NDPGW+ I V LSDA+VPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLTNDPGWKNIVVFLSDASVPGEGEHKIMDFIRRQRGQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LCGQ GH C+G + K G+ DE + + ++
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPRPCGLCGQTGHEIKACQGMPREKQGQHDEFANTMPAAEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT +L RVE +QAVG ED IF+KR + E K
Sbjct: 360 IDRLVGIYKDVVHKTGGYLTQNGYVNLERVEMIMQAVGVAEDNIFKKR----KDDDENFK 415
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE---CVGRLDNGKGTS 477
R + R+ + Q + + +F L P Q + C R+ +
Sbjct: 416 RRNKEKRKRMKAQ--QQGPAYLTTGQFAPHALGRRDRPEAVQNARHQACDMRMQS----- 468
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
+ ++ ++ A + N +D +++ ++ K+D +S+ ED
Sbjct: 469 ----NMVNQNAAQSLKAMMKNGGNVSPSDGADSRG---------VKRKADDSDSEPEPED 515
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
V+L E GWK+RYY+ KF+ + E+ R+ VV Y EGLCWV+ YYY+G SW+W++P
Sbjct: 516 NVRLWEEGWKQRYYKNKFDVDATD--EDFRRKVVQSYVEGLCWVLRYYYQGCASWKWYFP 573
Query: 598 YHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
+HYAPFASD KD+ FE PFKP QL+GVFP+AS + LP +R LM+ P+SPI
Sbjct: 574 FHYAPFASDFKDIKDMFSDFEKNTKPFKPLEQLMGVFPAASGNFLPPTWRNLMSSPDSPI 633
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + + LT EE RRNS+ +D+LF
Sbjct: 634 IDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTSEEKRRNSLGSDVLF 693
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFR 774
+ SHPL I+ L + + E E+ EL G+ G ++ DP P R
Sbjct: 694 LGKSHPLFDFIHEL----YRTESNEGTEIPA----ELCHGIQGRLN-LDDDPILPDNTVR 744
Query: 775 SPVASMEDIMGNQVL 789
SPV + D+ N +
Sbjct: 745 SPVPMLRDVSQNTAI 759
>gi|1060921|dbj|BAA07524.1| Dhm1 protein [Mus musculus]
Length = 947
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/768 (48%), Positives = 486/768 (63%), Gaps = 51/768 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A K ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 AIKGGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNQDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E DD+ FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSNDDWEFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ G ++AS P + Y+
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEM------------ 464
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
++ R SS + + SF +D + L + R D+ + P
Sbjct: 465 ------RMQRNSSPS------ISPNTSFASDGS------PSPLGGIRRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWL 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 684 LFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFS 723
>gi|33337899|gb|AAQ13577.1|AF152169_1 DHP protein [Homo sapiens]
Length = 950
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/796 (47%), Positives = 497/796 (62%), Gaps = 52/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ K P ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKCPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPR KMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRVKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIMLA
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
+F+I+RE F P + C LC Q GH +CEG ++ K G+ DE D + +
Sbjct: 241 FPHMNPNFTIIRE-EFKPNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREY++ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYVERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S P+ SF +D + L + R D+ + P
Sbjct: 472 PSISPN-------------------TSFTSDGS------PSPLGGIKRKAEDSDSEPEP- 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 506 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 YPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDS 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
LFV HPL I L Q E VEV PEL G+ G S P +
Sbjct: 684 LFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLDEEAILPDQIV 735
Query: 774 RSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 736 CSPVPMLRDLTQNTVV 751
>gi|258563400|ref|XP_002582445.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
gi|237907952|gb|EEP82353.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
Length = 1028
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/829 (45%), Positives = 509/829 (61%), Gaps = 65/829 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P +G +IPVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEFNGEEIPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P+ E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPSNEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGR-----KLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++ + ++ R +L + ++ +DSNVITPGT FM +LS AL+
Sbjct: 121 SAQEAKEADEKKAEFAKLLRKQNRGKGDTELAEEVVNKTWDSNVITPGTPFMDILSAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCSEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML L THE HF +LRE V F + C LCGQ GH+A C GKAK K+GEFDEK +
Sbjct: 241 LIMLGLGTHEPHFRVLREDVFFQESKARTCRLCGQQGHVAEACTGKAKEKSGEFDEK--Q 298
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 299 KGSPLKPFIWLHVSVLREYLAAEMFVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
EIRE I+ L+A+++ +GGYLT L+R + +Q + ED IF++R + +R
Sbjct: 359 EIRENGIDTLIAIWRDNIPLMGGYLTKDGHVDLKRAQLILQGLAKQEDAIFRRRRQTEER 418
Query: 415 HAERIKREKAQARRGDDVEPLAQP------DSLVPVSRFHGSRLASGPS------PS--- 459
KR K Q R+ + P +P D +P SR P+ PS
Sbjct: 419 RNANAKRRKEQERQRAEENPRKRPRKSLDNDMSMPSSRRGKEMDGGAPADMPLFIPSKGQ 478
Query: 460 -PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA-- 516
P + E + +G + + + S+ A + + ++ + ++ N E A
Sbjct: 479 LPRAERELTHAMVVNRGAVYKANMANK-SAAAALKSQLISGSENGTSNVDVNVESSIASS 537
Query: 517 -KLKELLRDKSDAFNSD------NPE----------EDKVKLGEPGWKERYYEEKFNAKT 559
K L + K+DA +D N E ED V+L E G+ +RYYE+KFN
Sbjct: 538 TKASPLGKRKADALEADTTTEQENSEKPPADEDQLPEDSVRLWEQGYADRYYEQKFNVDP 597
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ E R V Y EGLCWV+ YY++G SW W+YPYHYAPFA+D DLDQ +I F
Sbjct: 598 KDI--EFRHKVAKSYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLDQMDIQFNK 655
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G PF+PF QL+GV P+AS+HA+P+ +R LM+DP S I DFYP DF +D+NGK+++WQG+A
Sbjct: 656 GKPFRPFEQLMGVLPAASNHAIPDIFRDLMSDPASEIIDFYPEDFPIDLNGKKFAWQGVA 715
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL----SASIYTLDEHCK 735
LPFIDE RLL + K H LTE E RN + D LF+ HPL A+ Y+ +
Sbjct: 716 LLPFIDEKRLLAAMAKRYHRLTEAERARNEMGRDTLFISDRHPLYKDIVANFYSKKQGVP 775
Query: 736 QLKIKERVEVKERLNPELSDGMNGYIS-PCAGDPHPPVFRSPVASMEDI 783
LK+ RV S+G+ G + A PH S VA++ D+
Sbjct: 776 NLKLNMRV----------SEGLGGEVERDGAYIPH----SSLVAAINDV 810
>gi|119630592|gb|EAX10187.1| 5'-3' exoribonuclease 2, isoform CRA_b [Homo sapiens]
Length = 979
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/825 (46%), Positives = 501/825 (60%), Gaps = 81/825 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGV--------------- 105
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGV
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVYCEILGMLATALAFE 120
Query: 106 --------------APRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD 151
APRAKMNQQRSRRFRASK+ ++A E++R+R+E +G LPP+
Sbjct: 121 LLAYCQREGGIDKWAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEI 180
Query: 152 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSY 211
+ FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y
Sbjct: 181 KERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDY 240
Query: 212 VRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPG 271
+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C LC Q G
Sbjct: 241 IRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFG 299
Query: 272 HLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLEC 331
H +CEG + K G+ DE D + + + FL + LREYL+ E + + PF D+E
Sbjct: 300 HEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVER 359
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 391
+DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK GGYLT+ +L+RV+
Sbjct: 360 SIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQ 419
Query: 392 HFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH--- 448
+ AVG ED IF+KR R K ++ + +R +P P ++
Sbjct: 420 MIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRN 476
Query: 449 --GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD 506
GS++AS P + Y+ R+ N S P+ SF +D
Sbjct: 477 SPGSQVASNPRQAAYEM-----RMQNNSSPSISPN-------------------TSFTSD 512
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
+ L + R D+ + P ED V+L E GWK+RYY+ KF+ +E+
Sbjct: 513 GS------PSPLGGIKRKAEDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--F 563
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKP 625
R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP
Sbjct: 564 RRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKP 623
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+D
Sbjct: 624 LEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVD 683
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEV 745
E RL ++++ LT EE RRNS+ D+LFV HPL I L Q E VEV
Sbjct: 684 ERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEV 739
Query: 746 KERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
PEL G+ G S P + SPV + D+ N V+
Sbjct: 740 P----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 780
>gi|405969602|gb|EKC34564.1| 5'-3' exoribonuclease 2 [Crassostrea gigas]
Length = 954
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/803 (46%), Positives = 502/803 (62%), Gaps = 29/803 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ K P ++ IEE+P ++GVKIPVDTS+PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKNPSILVHCIEEKPREVNGVKIPVDTSQPNPNDYEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDR+F +VRPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPEDKPAPKNEDEMMILIFEYIDRIFSIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ + E RLR E +G LPP K + FDSN ITPGT FM L+ L+YYIH
Sbjct: 121 ASKETKEKIEEMSRLRDELTTKGFNLPPEKEKGEHFDSNCITPGTPFMFRLADCLRYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW+ IK+ILSDANVPGEGEHKIM Y+R QR P +DPNT+HCL G DADL+ML
Sbjct: 181 ERLNNDPGWQNIKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTKHCLCGADADLLML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF+I+RE F P Q C LCGQ GH C G K GE DE +V+ +
Sbjct: 241 GLATHEPHFTIIRE-EFKPNQPRPCDLCGQLGHEMKECMGLPKEMCGENDEL-PKVMGAE 298
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ + F+ + LREYL+ E + N PF+ D E +DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 299 QEFIFIRLNILREYLERELLMDNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIREG 358
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR----ARLHQRH 415
AI+ L+ +YK R GGYLT+ +L RV+ + +G ED IF++R +R+
Sbjct: 359 AIDRLVKLYKSCVRRTGGYLTNSGVVNLERVQVVMSDLGEVEDEIFKRRRDTELEFRRRN 418
Query: 416 AERIKREK-AQARRGDDVEP---LAQPDSLVPVSRFHGSRLASGPSPSPYQQ--SECVGR 469
+R +REK Q + P + + L+ F + + GP +P Q + VG
Sbjct: 419 KQRKEREKRVQFLLSFNRAPVMIICKNSKLICECCF---QFSQGPRWTPGGQFAPQPVGH 475
Query: 470 LDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 528
+G P + V + +A A + ++ + + + E +D
Sbjct: 476 SHSGPSAISNPRQEVAKGRMDTMRDSANKNAAAELKAMMTKDDQRGEKRKAEDQSKPNDE 535
Query: 529 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 588
+ P D+V+L E GWK+RYY KF + +E R+ V Y GLCWV+ YYY+G
Sbjct: 536 EEEEEP-ADEVRLWEDGWKDRYYSSKFGVDGSD--QEFRQTVANHYVRGLCWVLRYYYQG 592
Query: 589 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRK 647
SW+W++PYHYAPFASD ++ Q + SFE PF+P QL+GVFP+AS LP +++
Sbjct: 593 CASWKWYFPYHYAPFASDFVNIGQLSNSFEKQTVPFRPLEQLMGVFPAASKKHLPVTWQR 652
Query: 648 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 707
LM DP SPI DFYP DF++D+NGK+Y+WQG+A LPF+DE RLL ++K+ LT+ E R
Sbjct: 653 LMCDPESPIIDFYPIDFKIDLNGKKYAWQGVALLPFVDEKRLLSALEKVYPDLTDAERER 712
Query: 708 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI-SPCAG 766
N+ +D LFV + HP + L E E + +++P+ ++GM G + +
Sbjct: 713 NTWGSDRLFVGIRHPSYSFFEGLYE-------GELTKEGVKVDPKNAEGMGGLVWADQRA 765
Query: 767 DPHPPVFRSPVASMEDIMGNQVL 789
SP+ ++ I N+ L
Sbjct: 766 TLTGGTVESPLKELQPITDNRAL 788
>gi|410916005|ref|XP_003971477.1| PREDICTED: 5'-3' exoribonuclease 2-like [Takifugu rubripes]
Length = 992
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/795 (46%), Positives = 497/795 (62%), Gaps = 37/795 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +EE+ +GV+IPVDT++PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTRPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+ AP DE+ +F+YIDRLF +VRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKAAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ A+ +++R+R+E + G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGAELVEDKKRIREEVIQRGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNN+PGW + V LSDA+VPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNNPGWRNVTVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LCGQ GH +C+G A+ K GE DE D + V ++
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPRPCALCGQLGHDIKDCQGTAREKQGEHDEFADSMPVSEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ---RHAE 417
I+ L+ +YK GGYLT+ L RVE +QAVG ED IF+KR + R
Sbjct: 360 IDRLVGIYKDVVHKTGGYLTENGYVKLERVELIMQAVGVAEDNIFKKRKEDDEGFKRRMR 419
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
K+ +RG + + +F L P Q + + K +
Sbjct: 420 EKKKRMKMEQRG---------PAYLTTGQFTPHALGGRNQPEAVQNARHQA-YEMRKQSM 469
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
R +K + ++ AA+ N + +N E + + K++ +S+ ED
Sbjct: 470 ERNNK----DAAQSLKAAMRNGGNVSSSACPDNSTESRGAKR-----KAEDSDSEPEPED 520
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
V+L E GWK+RYY+ KF+ + E+ RK VV Y EGLCWV+ YYY+G SW+W++P
Sbjct: 521 NVRLWEEGWKQRYYKNKFDVDVMD--EDFRKKVVQSYVEGLCWVLRYYYQGCASWKWYFP 578
Query: 598 YHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
+HYAPFASD KD+ FE PF+P QL+ VFP+AS + LPE +R LM+ P+S I
Sbjct: 579 FHYAPFASDFKDIKGMFTDFEKDTKPFQPLEQLMSVFPAASGNFLPETWRNLMSSPDSSI 638
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + + LT EE +RNS+ +D +F
Sbjct: 639 IDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEEVKRNSLGSDFIF 698
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFR 774
+ +HPL Y + + + E E+ +L G+ G ++ DP P
Sbjct: 699 LGKAHPL----YDFIQELYRTEATEGTEIPA----DLCHGIQGTLN-LDDDPILPDKAVM 749
Query: 775 SPVASMEDIMGNQVL 789
SP+ ++ DI N +
Sbjct: 750 SPIPTLRDITQNNSV 764
>gi|326914793|ref|XP_003203707.1| PREDICTED: 5'-3' exoribonuclease 2-like [Meleagris gallopavo]
Length = 985
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/796 (46%), Positives = 494/796 (62%), Gaps = 52/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIE-EEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KYP ++ + +E E +GVK VDTS+PNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNRVEGERAKECNGVKASVDTSRPNPNEVEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RASK+ ++A E++++RQE +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 RASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIA 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN+DPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 DRLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C LC Q GH +C+G + K G+ D+ D + +
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPASE 299
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ + F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 300 QEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 359
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R
Sbjct: 360 AIDRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQ 419
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP----SPYQQSECVGRLDNGKG 475
K +K + +R S +P +F L + SP +P Q + + D
Sbjct: 420 KEKKKRMKRDH--------PSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNS 471
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
T P+ L+S + A ++ KS+ +S+
Sbjct: 472 TMSSPNT--SLNSDGSPSPA------------------------RGIKRKSEDSDSEPEP 505
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED ++L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW W+
Sbjct: 506 EDNIRLWESGWKQRYYKNKFDVDASDEK--FRRKVVQSYVEGLCWVLRYYYQGCASWNWY 563
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLMTDP S
Sbjct: 564 YPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPES 623
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 624 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDV 683
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
LFV HPL I +Q K K V + PEL G+ G ++ P
Sbjct: 684 LFVGKHHPLCDFI------VEQYKSKNTEPVD--MPPELCYGIQGKLTLNENAVLPDKTV 735
Query: 774 RSPVASMEDIMGNQVL 789
SPV + D+ N +
Sbjct: 736 ESPVPMLRDLTQNSAV 751
>gi|340375702|ref|XP_003386373.1| PREDICTED: 5'-3' exoribonuclease 2-like [Amphimedon queenslandica]
Length = 1066
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/785 (46%), Positives = 494/785 (62%), Gaps = 33/785 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL++KYP +V +EE+ + G+ +P+D + PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEKRKKLQGIDVPIDATLPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP T DE+ +F+YIDR+F +VRPR+L+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPEDKPAPETEDEMMVAIFEYIDRIFNIVRPRRLVYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
++K++ D E +++RQE G LPP K DS FDSN ITPGT+FMA L+I LQYYIH
Sbjct: 121 SAKESVDKLEEIKKVRQELAERGVGLPPLKPDSAHFDSNCITPGTQFMANLAICLQYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+N++P W+ +KVILSDANVPGEGEHKIM Y+R QR G+DPNT HCLYG DADLIML
Sbjct: 181 DRMNHNPAWKGLKVILSDANVPGEGEHKIMDYIRKQRASVGHDPNTHHCLYGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+ILRE F P Q C +C Q GH C G+A+ K GEFDE + +
Sbjct: 241 GLATHEPYFTILRE-DFKPNQPRPCEICNQYGHSMTECTGEAREKKGEFDELATANIAME 299
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K + F+ I LREYL E RI F+ D E +DD++FMCFFVGNDFLPH+P+L+IREG
Sbjct: 300 KEFIFIRINVLREYLQRELRIDGLDFKFDFERAIDDWVFMCFFVGNDFLPHLPSLQIREG 359
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK + YLT+ ++ V+ + +G ED IF +R R+ E
Sbjct: 360 AIDRLINLYKKFLPSTKSYLTENGFVDVKNVQLILFELGKVEDEIFIRRRDQDIRNKE-- 417
Query: 420 KREKAQARRGDDVE-PLAQPDSLVPV-----------SRFHGSRLASGPSPSPYQQSECV 467
R+K + RR +D + P P+ L PV +R + GP+PS
Sbjct: 418 -RQKFKRRRIEDYKAPQFIPEQLAPVPIGSAPSPAVNARHDAYLMRQGPAPSAGAGGVSG 476
Query: 468 GRLDNGKGTSGRPHKVPRLS-----SGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 522
L + K + + + S +G++ S ++ + + K +
Sbjct: 477 SSLTSNKEAAKSMKSLLKKSKSFDDTGSSASQEGGGVRRSLTSEEERPRNTLKRSFSDAR 536
Query: 523 RDKSDAFN---SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 579
R S EED+V+L E GWKERYY+ KF + + + + VV Y+EGLC
Sbjct: 537 RANSGGRGHGEDSGSEEDEVRLWEDGWKERYYQSKFCVSSND--IDFVRQVVESYSEGLC 594
Query: 580 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASS 638
WVM YYY+G SW+W+YP+HYAPFASD + + FE G PF+P QL+ VFP+AS+
Sbjct: 595 WVMSYYYQGCPSWKWYYPFHYAPFASDFRYIRDVRDRFETGSKPFRPLEQLMSVFPAASA 654
Query: 639 HALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEH 698
LP ++ LM D +S I DFYPT+F++D+NGK+++WQG+A LPF+DE RL + ++ + H
Sbjct: 655 KFLPPSWQTLMLDDDSSIIDFYPTNFKIDLNGKKFAWQGVALLPFVDECRLHEALEPLYH 714
Query: 699 TLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMN 758
L E RNS+ D++FV H LS +Y + E+V + +NP+ S G++
Sbjct: 715 MLDPLETVRNSLGNDLIFV---HKLS-KLYAFARTLYEETPGEKVGLVS-INPDSSGGVS 769
Query: 759 GYISP 763
G + P
Sbjct: 770 GSVWP 774
>gi|383854346|ref|XP_003702682.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Megachile rotundata]
Length = 944
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/772 (46%), Positives = 482/772 (62%), Gaps = 42/772 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + IE++P+ +GV++PV+++ PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPITTNGVRVPVNSADPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ + E +R+R E +G LPP K + FDSN ITPGT FMA LS L YYIH
Sbjct: 121 ASKETNEKINEIQRIRSELTLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L G DADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH C G + E + G E
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQECTGSEPNQKEEDNAFGSECQ--- 296
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 297 --FIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR Q
Sbjct: 355 AIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKR---QQNELAFK 411
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+REK + RR + +P +F + L P ++N + + +
Sbjct: 412 QREKDKKRRLLGIG--NNKPKWIPTGQFAPTALGGQIKP-----------VENARYEAYQ 458
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
+ R +T + P+++ + K + + + D SD D+ D+V
Sbjct: 459 MRVLGRNYHSSTEQKGNTKEMLESMIRPEDSSNQGKKRKIDEVEDNSD----DDQAHDEV 514
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++PYH
Sbjct: 515 RLWEAGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYH 572
Query: 600 YAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + KLM+DP SPI D
Sbjct: 573 YAPFASDFINIGGLSTEFEKGTVPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPRSPIID 632
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF++D+NGK+++WQG+A LPF+DE RL ++ LTE E +RN D L+V
Sbjct: 633 FYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKKRNVRGDDRLYV- 691
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGD 767
L +S Y + + VE P DGM G + C GD
Sbjct: 692 ---GLGSSGYNFIKGLYTNHVGYDVET-----PICIDGMRGTVLLAEDCVGD 735
>gi|432092124|gb|ELK24810.1| 5'-3' exoribonuclease 2 [Myotis davidii]
Length = 925
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/709 (50%), Positives = 468/709 (66%), Gaps = 42/709 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVK+PVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKVPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPV----SRFHGSRLASGPSPSPYQQSECVGRLDNGKGT 476
++ + +R +P P ++ SR GS++A+ P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPGGILTPHALGSRNSGSQVANNPRQAAYEM-----RMQNNSSP 471
Query: 477 SGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
S P+ SF +D + L + R K+D +S+ E
Sbjct: 472 SVSPN-------------------TSFTSDGS------PSPLGGMKR-KADDSDSEPEPE 505
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+Y
Sbjct: 506 DNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYY 563
Query: 597 PYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
P+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 564 PFHYAPFASDFEGIADLPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS 623
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 624 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 672
>gi|328788352|ref|XP_392371.3| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis mellifera]
Length = 948
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/793 (46%), Positives = 491/793 (61%), Gaps = 46/793 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + IE++P+ +G+++PV++++PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPITTNGIRVPVNSAEPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP DE+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPQNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+A + E +R+R E +G LPP K + FDSN ITPGT FMA LS L YYIH
Sbjct: 121 ASKEANEKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L G DADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH C G + E + G E
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQECTGAEPNQREEANPFGSECQ--- 296
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 297 --YIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR Q
Sbjct: 355 AIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKR---QQNELAYK 411
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+REK + RR + +P +F +R+ P + E +G+
Sbjct: 412 QREKDKKRRLLGIS--NNKPKWIPTGQFAPTRIGEHIKPVQNARYEAYQMRIHGQN---- 465
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
+ + + +++ ENS TD E K + + + D+S D+V
Sbjct: 466 -YHTSEKGNAKEMLESMIRPENS--TD-HERKRKSEVVEDDSDDDQS---------HDEV 512
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++PYH
Sbjct: 513 RLWEDGFKDRYYESKFDVSP--DNLVFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYH 570
Query: 600 YAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + KLM+DP SPI D
Sbjct: 571 YAPFASDFINIGGLSTEFEKGTIPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPKSPIID 630
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF++D+NGK+++WQG+A LPF+DE RL ++ LTE E RN D L+V
Sbjct: 631 FYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKIRNVRGDDRLYVG 690
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPPVFRS 775
L + S Y + ++ E + DGM G + C GD S
Sbjct: 691 LGN----SGYNFMKGLYTNHVRSDAETSICI-----DGMRGTVLLTDDCVGD--GATLPS 739
Query: 776 PVASMEDIMGNQV 788
P+ + I N+V
Sbjct: 740 PINGLLPIRNNKV 752
>gi|380025877|ref|XP_003696690.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis florea]
Length = 948
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/793 (45%), Positives = 487/793 (61%), Gaps = 46/793 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + IE++P+ +G+++PV++++PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPITTNGIRVPVNSAEPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP DE+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPQNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+A++ E +R+R E +G LPP K + FDSN ITPGT FMA LS L YYIH
Sbjct: 121 ASKEASEKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L G DADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH C G + E + G E
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQECTGAEPNQREEANTFGSECQ--- 296
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 297 --YIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR Q
Sbjct: 355 AIDRLVNLYKKTVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKR---QQNELAYK 411
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+REK + RR + +P +F R+ P + E +G+
Sbjct: 412 QREKDKKRRLLGIS--NNKPKWIPTGQFAPMRIGEHIKPVQNARYEAYQMRVHGQN---- 465
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
+ + + +++ ENS + + + E + + D+V
Sbjct: 466 -YHTNEKGNAKEMLESMIRPENSTDHERKRKSEVLEDDSDDDQ------------SHDEV 512
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++PYH
Sbjct: 513 RLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYH 570
Query: 600 YAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + KLM+DP SPI D
Sbjct: 571 YAPFASDFINIGGLSTEFEKGTIPFRPLEQLMGVFPAASSKHVPAPWAKLMSDPKSPIID 630
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF++D+NGK+++WQG+A LPF+DE RL ++ LTE E RN D L+V
Sbjct: 631 FYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKIRNVRGDDRLYVG 690
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPPVFRS 775
L + S Y + ++ E + DGM G + C GD S
Sbjct: 691 LGN----SGYNFMKGLYTNHVRSDAETSICI-----DGMRGTVLLTEDCVGD--GATLPS 739
Query: 776 PVASMEDIMGNQV 788
P+ + I N+V
Sbjct: 740 PINGLLPIRNNKV 752
>gi|350410980|ref|XP_003489200.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus impatiens]
Length = 947
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/725 (48%), Positives = 471/725 (64%), Gaps = 36/725 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + IE++P+ +GV++PV+++ PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVECIEQKPITTNGVRVPVNSADPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP +E+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+A++ E +R+R E +G LPP K FDSN ITPGT FMA LS L YYIH
Sbjct: 121 ASKEASEKVNEIKRIRSELTLKGASLPPEKPKEDHFDSNCITPGTPFMARLSQCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L G DADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH C G + E + G E
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQECTGAEVNQGDETNTFGSEC---- 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 296 -QYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR + +R
Sbjct: 355 AIDRLVNLYKKAVYKTGGFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAFKQRE 414
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKG--TS 477
K +K + + +P +P +F +R+ SP + E G+ TS
Sbjct: 415 KDKKKLSLGIGNNKP-----KWIPTGQFAPTRIGEHVSPVQNARYEAYQMRVCGQNYHTS 469
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
G+ S + +++ ENS ++ + R+ ++ + D+ D
Sbjct: 470 GK-------RSSQEMLESMMRPENS------------TNQVMKRKRESAEDDSDDDQVHD 510
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++P
Sbjct: 511 EVRLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFP 568
Query: 598 YHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
YHYAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + KLM +P SPI
Sbjct: 569 YHYAPFASDFINIGGLSTEFEKGTTPFRPLEQLMGVFPAASSKHIPAPWAKLMINPRSPI 628
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF++D+NGK+++WQGIA LPF+DE RL ++ LTE E +RN + L+
Sbjct: 629 IDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFKALEPYYDCLTEAEKKRNVQGDNRLY 688
Query: 717 VLLSH 721
V L +
Sbjct: 689 VGLGN 693
>gi|297260411|ref|XP_001094734.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Macaca mulatta]
Length = 951
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/800 (47%), Positives = 492/800 (61%), Gaps = 59/800 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 420 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 471
Query: 476 TSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
S P+ S + IG +AE+S +S+
Sbjct: 472 PSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPE 504
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 505 PEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKW 562
Query: 595 FYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSAS---SHALPEHYRKLMT 650
+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS L+
Sbjct: 563 YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASEMCDFCFDSLLFSLIQ 622
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
D S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+
Sbjct: 623 D--SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSL 680
Query: 711 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP 770
D+LFV HPL I L Q E V+V PEL G+ G S P
Sbjct: 681 GGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILP 732
Query: 771 -PVFRSPVASMEDIMGNQVL 789
+ SPV + D+ N V+
Sbjct: 733 DQIVCSPVPMLRDLTQNTVV 752
>gi|392870672|gb|EAS32493.2| 5'-3' exoribonuclease 2 [Coccidioides immitis RS]
Length = 1016
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/808 (44%), Positives = 492/808 (60%), Gaps = 67/808 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG + PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +PAP E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDA--ADSAAEE--ERLRQEFEREG-RKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A AD E + LRQ+ +G ++ + + +DSNVITPGT FM +LS AL+
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P +D NTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH+A C GKAK K GEFDEK +
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEK--Q 298
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 299 RGTPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK------- 407
EIRE I+ L+A+++ +GGYLT L+R + +Q + ED IF++
Sbjct: 359 EIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAIFRRRRQTEER 418
Query: 408 ------------------RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHG 449
AR RH+ + RRG D++ +A + +P+
Sbjct: 419 RNANAKRRKEQERQREEENARKRPRHSLENEPAGPSPRRGKDMDGIAPAN--MPLFIPSK 476
Query: 450 SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQE 509
L P + E + +G + + + S+ A + + ++ + +
Sbjct: 477 GEL-------PRAERELTHAMVVNRGAIYKANMANK-SAAAALKSQLISGASEMSVEVST 528
Query: 510 NKEEFKAKLKELLRDKSDAFNSDNPEE----------------DKVKLGEPGWKERYYEE 553
+ L + K+DA +DN E D V+L E G+ +RYYE+
Sbjct: 529 STSANDVSPSALGKRKADALETDNTTEQEDSERPPQEQDELPADSVRLWEQGYADRYYEQ 588
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+ + E R V Y EGLCWV+ YY++G SW W+YPYHYAPFA+D DL+
Sbjct: 589 KFHVDPKDI--EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLEHM 646
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
+I F G PF+PF QL+GV P+AS+HA+PE +R LM++P S I DFYP +F +D+NGK++
Sbjct: 647 DIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEEFPIDLNGKKF 706
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
+WQG+A LPFIDE+RLL+ + K L+EEE RN + D+LF+ HPL E
Sbjct: 707 AWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPL------YKEL 760
Query: 734 CKQLKIKERVEVKERLNPELSDGMNGYI 761
K++ K +LN +S+G+ G +
Sbjct: 761 VANFYSKKQTVPKFKLNMRVSEGLGGKV 788
>gi|119186689|ref|XP_001243951.1| hypothetical protein CIMG_03392 [Coccidioides immitis RS]
Length = 1031
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/808 (44%), Positives = 492/808 (60%), Gaps = 67/808 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG + PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 16 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 75
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +PAP E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 76 PCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 135
Query: 121 ASKDA--ADSAAEE--ERLRQEFEREG-RKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A AD E + LRQ+ +G ++ + + +DSNVITPGT FM +LS AL+
Sbjct: 136 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 195
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P +D NTRH +YGLDAD
Sbjct: 196 YWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDAD 255
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH+A C GKAK K GEFDEK +
Sbjct: 256 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEK--Q 313
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 314 RGTPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 373
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK------- 407
EIRE I+ L+A+++ +GGYLT L+R + +Q + ED IF++
Sbjct: 374 EIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAIFRRRRQTEER 433
Query: 408 ------------------RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHG 449
AR RH+ + RRG D++ +A + +P+
Sbjct: 434 RNANAKRRKEQERQREEENARKRPRHSLENEPAGPSPRRGKDMDGIAPAN--MPLFIPSK 491
Query: 450 SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQE 509
L P + E + +G + + + S+ A + + ++ + +
Sbjct: 492 GEL-------PRAERELTHAMVVNRGAIYKANMANK-SAAAALKSQLISGASEMSVEVST 543
Query: 510 NKEEFKAKLKELLRDKSDAFNSDNPEE----------------DKVKLGEPGWKERYYEE 553
+ L + K+DA +DN E D V+L E G+ +RYYE+
Sbjct: 544 STSANDVSPSALGKRKADALETDNTTEQEDSERPPQEQDELPADSVRLWEQGYADRYYEQ 603
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+ + E R V Y EGLCWV+ YY++G SW W+YPYHYAPFA+D DL+
Sbjct: 604 KFHVDPKDI--EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLEHM 661
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
+I F G PF+PF QL+GV P+AS+HA+PE +R LM++P S I DFYP +F +D+NGK++
Sbjct: 662 DIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEEFPIDLNGKKF 721
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
+WQG+A LPFIDE+RLL+ + K L+EEE RN + D+LF+ HPL E
Sbjct: 722 AWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPL------YKEL 775
Query: 734 CKQLKIKERVEVKERLNPELSDGMNGYI 761
K++ K +LN +S+G+ G +
Sbjct: 776 VANFYSKKQTVPKFKLNMRVSEGLGGKV 803
>gi|320038785|gb|EFW20720.1| 5'-3' exoribonculease Dhp1 [Coccidioides posadasii str. Silveira]
Length = 1016
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/808 (45%), Positives = 490/808 (60%), Gaps = 67/808 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG + PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +PAP E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDA--ADSAAEE--ERLRQEFEREG-RKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A AD E + LRQ+ +G ++ + + +DSNVITPGT FM +LS AL+
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P +D NTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH+A C GKAK K GEFDEK +
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEK--Q 298
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 299 RGTPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK------- 407
EIRE I+ L+A+++ +GGYLT L+R + +Q + ED IF++
Sbjct: 359 EIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAIFRRRRQTEER 418
Query: 408 ------------------RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHG 449
AR RH+ + RRG D++ +A + +P+ F
Sbjct: 419 RNTNAKRRKEQERQREEENARKRPRHSLENETAGPSPRRGKDMDGIAPAN--MPL--FIP 474
Query: 450 SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQE 509
S+ + + V R K L S GA+ + E S T +
Sbjct: 475 SKGELPRAERELTHAMVVNRGAIYKANMANKSAAAALKSQLISGASEMSVEVSTSTSAND 534
Query: 510 NKEEFKAKLKELLRDKSDAFNSDNPEE----------------DKVKLGEPGWKERYYEE 553
L + K+DA +DN E D V+L E G+ +RYYE+
Sbjct: 535 ------VSPSALGKRKADALETDNTTEQEDSERPPQEQDELPADSVRLWEQGYADRYYEQ 588
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+ + E R V Y EGLCWV+ YY++G SW W+YPYHYAPFA+D DL+
Sbjct: 589 KFHVDPKDI--EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLEHM 646
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
+I F G PF+PF QL+GV P+AS+HA+PE +R LM++P S I DFYP +F +D+NGK++
Sbjct: 647 DIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEEFPIDLNGKKF 706
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
+WQG+A LPFIDE+RLL+ + K L+EEE RN + D+LF+ HPL E
Sbjct: 707 AWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPL------YKEL 760
Query: 734 CKQLKIKERVEVKERLNPELSDGMNGYI 761
K++ K +LN +S+G+ G +
Sbjct: 761 VANFYSKKQSVPKFKLNMRVSEGLGGKV 788
>gi|324502555|gb|ADY41124.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 934
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/766 (47%), Positives = 477/766 (62%), Gaps = 47/766 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + +EE+P +DG IPV T++PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVNAVEEKPRDVDGNLIPVRTTEPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+RPAP + DE+F +F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPENRPAPKSEDEMFALIFEYIDRIFAVVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+AA+ + +R+ E+EG LPPK + + FDSN ITPGT FMA L+ AL+YY+H
Sbjct: 121 ASKEAAEKLQQIAEVRERLEKEGFPLPPKKEEGEHFDSNCITPGTPFMARLADALRYYVH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+RLNNDPGW I+VILSDAN PGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 181 MRLNNDPGWANIEVILSDANAPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P QQ C LCGQ GH +C+G A+ +A E D + +
Sbjct: 241 GLATHEPNFNIIRE-EFIPNQQRPCDLCGQYGHEVKDCQGLAQDEAAECDAN---PMQKE 296
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + LREYL+ E ++ N DLE +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 297 TNFIFVRLPVLREYLERELQMNNSSVPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREN 356
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YK +GGYLT+ + RV+ + +G ED IF+ R Q+ +
Sbjct: 357 AIDRLIRLYKDMVAKVGGYLTNQGDVYMDRVQKILNGLGEVEDEIFKNR---QQKELQFR 413
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+R KA+ RR E A + +PV + A+GP + + R +
Sbjct: 414 ERNKAKRRR----ERAATTPAYIPVRGSLLAPQANGPVSFSGADTRRLAR-----DARVQ 464
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE--D 537
+ SS A V+A + P++ K E +SD+ EE D
Sbjct: 465 AMEYQNASSKANTVVTTVQA-----SGPRKRKME----------------DSDSEEEVYD 503
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+V+L E GWKERYY KF + R V Y EGLCWV+ YYY+G SW W++P
Sbjct: 504 EVRLWETGWKERYYRSKFEVDGND--IAFRHKVAWAYVEGLCWVLKYYYQGCVSWNWYFP 561
Query: 598 YHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
YHYAPFASD + QF F PFKP QL+ VFP+AS LPE ++ LMT SPI
Sbjct: 562 YHYAPFASDFDTISQFKPDFSAHTEPFKPLEQLMAVFPAASKKHLPESWQDLMTSEESPI 621
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF+VD+NGK+Y+WQG+A LPF+DE RLL+ + + L + E RNS D +F
Sbjct: 622 IDFYPEDFQVDLNGKKYAWQGVALLPFVDEHRLLETLATVYDKLDDFERERNSRGPDRIF 681
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
V HP S + L E E ++P ++G+ G +
Sbjct: 682 VGRKHPFSKFLQQLYEG----SCPENEGTLIAIDPSFTNGLAGSVG 723
>gi|303317580|ref|XP_003068792.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108473|gb|EER26647.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1016
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/808 (45%), Positives = 490/808 (60%), Gaps = 67/808 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG + PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +PAP E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDA--ADSAAEE--ERLRQEFEREG-RKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A AD E + LRQ+ +G ++ + + +DSNVITPGT FM +LS AL+
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ P +D NTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH+A C GKAK K GEFDEK +
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEK--Q 298
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +PN PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 299 RGTPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK------- 407
EIRE I+ L+A+++ +GGYLT L+R + +Q + ED IF++
Sbjct: 359 EIRENGIDTLIAIWRDNIPLMGGYLTQDGNVDLKRAQLILQGLAKQEDAIFRRRRQTEER 418
Query: 408 ------------------RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHG 449
AR RH+ + RRG D++ +A + +P+ F
Sbjct: 419 RNTNAKRRKEQERQREEENARKRPRHSLEDETAGPSPRRGKDMDGIAPAN--MPL--FIP 474
Query: 450 SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQE 509
S+ + + V R K L S GA+ + E S T +
Sbjct: 475 SKGELPRAERELTHAMVVNRGAIYKANMANKSAAAALKSQLISGASEMSVEVSTSTSAND 534
Query: 510 NKEEFKAKLKELLRDKSDAFNSDNPEE----------------DKVKLGEPGWKERYYEE 553
L + K+DA +DN E D V+L E G+ +RYYE+
Sbjct: 535 ------VSPSALGKRKADALETDNTTEQEDSERPPQEQDELPADSVRLWEQGYADRYYEQ 588
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+ + E R V Y EGLCWV+ YY++G SW W+YPYHYAPFA+D DL+
Sbjct: 589 KFHVDPKDI--EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLEHM 646
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
+I F G PF+PF QL+GV P+AS+HA+PE +R LM++P S I DFYP +F +D+NGK++
Sbjct: 647 DIQFHKGAPFRPFEQLMGVLPAASNHAIPEIFRDLMSNPESEIIDFYPEEFPIDLNGKKF 706
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
+WQG+A LPFIDE+RLL+ + K L+EEE RN + D+LF+ HPL E
Sbjct: 707 AWQGVALLPFIDESRLLEAMAKRYPRLSEEEKARNEMGRDILFISDRHPL------YREL 760
Query: 734 CKQLKIKERVEVKERLNPELSDGMNGYI 761
K++ K +LN +S+G+ G +
Sbjct: 761 VANFYSKKQSVPKFKLNMRVSEGLGGKV 788
>gi|340714666|ref|XP_003395847.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus terrestris]
Length = 946
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/725 (48%), Positives = 468/725 (64%), Gaps = 37/725 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + IE++P+ +GV++PV++ PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVECIEQKPITTNGVRVPVNSVDPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP +E+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ + E +R+R E +G LPP K FDSN ITPGT FMA LS L YYIH
Sbjct: 121 ASKETIEKVNEIKRIRSELILKGVSLPPEKPKEDHFDSNCITPGTPFMARLSKCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L G DADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH +C G + E D G E
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMQDCTGAEANQGDETDTFGSEC---- 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ + LREYL+ E ++PN PF+ D E ++DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 296 -QYIFVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK GG+LTD +L RV+ + +G ED IF++R + + +R
Sbjct: 355 AIDRLVNLYKKAVYKTGGFLTDSGDVNLDRVQLIMSELGEVEDEIFKRRQQNELAYKQRE 414
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKG--TS 477
K +K + +P +P+ +F +R+ SP + E G+ TS
Sbjct: 415 KDKKKLLLGISNKKP-----KWIPMGQFAPTRIGEHVSPVQNARYEAYEMRVRGQNYHTS 469
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
R S + +++ ENS ++ + R+ + + D+ D
Sbjct: 470 AR--------SSQKMLESMMRPENS------------TNQITKRRREPVEDDSDDDQVHD 509
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++P
Sbjct: 510 EVRLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFP 567
Query: 598 YHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
YHYAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + KLM DP SPI
Sbjct: 568 YHYAPFASDFINIGGLSTEFEKGTTPFRPLEQLMGVFPAASSKHIPAPWAKLMIDPRSPI 627
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF++D+NGK+++WQGIA LPF+DE RL ++ LTE E +RN + L+
Sbjct: 628 IDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFKALEPYYDCLTEAEKKRNVEGDNRLY 687
Query: 717 VLLSH 721
V L +
Sbjct: 688 VGLGN 692
>gi|291242576|ref|XP_002741181.1| PREDICTED: 5-3 exoribonuclease 2-like [Saccoglossus kowalevskii]
Length = 965
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/802 (46%), Positives = 498/802 (62%), Gaps = 53/802 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL++KYP +V +EE+P + G+++PV+ ++PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEKPKEVHGIQVPVNITEPNPNEIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP DE+ +F+ IDRL +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPENKPAPKNEDEMMLAIFECIDRLMRIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKL-PPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
K+ + E +++++E G L PPK S+ FDSN ITPGTEFM L+ L+YY+
Sbjct: 121 GPKEVREKQVEIDKVKEEILSRGGTLPPPKPVSEKFDSNCITPGTEFMFRLADCLRYYVT 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+ DPGW K+KVILSDANVPGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 ERIMTDPGWSKVKVILSDANVPGEGEHKIMDYIRKQRGSPDHDPNTHHCLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P C LCGQ GH C G AK K GEFDE + V +
Sbjct: 241 GLATHEPYFTIIRE-EFKPNAPRACELCGQYGHEMKECTGAAKEKEGEFDEL-TKPFVQE 298
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ + FL + LREYL+ E + PF D E +DD++FMCFFVGNDFLPH+P+L+IREG
Sbjct: 299 QEFIFLRLNILREYLEKELFMTGLPFTFDFERAIDDWVFMCFFVGNDFLPHLPSLQIREG 358
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR----ARLHQRH 415
AI+ L+ +YK GGYLT +L RV+ + +G ED IF+KR R
Sbjct: 359 AIDRLIRIYKTAVFKTGGYLTKDGVVNLERVQMMMTDLGEMEDGIFKKRRSDDVRFRNIQ 418
Query: 416 AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP--SPYQQSECVGRLDNG 473
ER KR K + S VP ++ ++S PS +P Q++ +
Sbjct: 419 KERKKRNKRNS-----------APSFVPAGQYAPQPVSSSPSAISNPRQEAYQMRMGTGP 467
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
K ++G SS A ++A + +T + + + +E ++ D
Sbjct: 468 KSSTG--------SSAVGQDLANLDAAKALKTMLGSDSQPGSKRKREDEEEEDDE----- 514
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
+D ++L E GWK+RYY+ KF+ E E+ + VV Y EGLCWV+ YYY+G SW+
Sbjct: 515 -PKDDIRLWEDGWKDRYYKLKFDVS--ENDEQFVQSVVSSYVEGLCWVLRYYYQGCPSWK 571
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W++P+HYAPFA++ D+ + FE G PFKP QL+GVFPSAS LPE +RKLM+DP
Sbjct: 572 WYFPFHYAPFAANFIDIGKLPNDFEKGTKPFKPLEQLMGVFPSASGQFLPETWRKLMSDP 631
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
+SPI DFYP DF +D+NGKRY+WQG+A LPF+DE RL + + + LT EE RN + +
Sbjct: 632 DSPIIDFYPDDFAIDLNGKRYAWQGVALLPFVDEKRLKEALVGVYSDLTPEEIHRNGLGS 691
Query: 713 DMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP----CA-GD 767
D LFV HP + K+L +NP+L++GM+G I C G+
Sbjct: 692 DRLFVGKKHPAY-------DFFKELYDGGDFSEPVDMNPKLTEGMSGTIWADEFVCMPGE 744
Query: 768 PHPPVFRSPVASMEDIMGNQVL 789
P +SP+ +ED+ +VL
Sbjct: 745 PR----KSPLPMLEDLRNTEVL 762
>gi|390354842|ref|XP_003728421.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Strongylocentrotus
purpuratus]
Length = 1010
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/803 (46%), Positives = 486/803 (60%), Gaps = 63/803 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL++KYP +V +EE+ +D V+IPVDT++PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCLEEKAKEVDEVRIPVDTTQPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP DE+ + +F YIDRL +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPENKPAPKDEDEMMREIFLYIDRLISIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEF-EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK++ D + R+R E +R G PPK+ FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKESRDKRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYIT 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN+DPGW+ IKVILSDAN PGEGEHKIM Y+R QR P +DPNT HC+ G DADLIML
Sbjct: 181 ERLNSDPGWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCMCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHEV+F+I+RE F P Q+ C LC Q GH C+G K +A E D + VP+
Sbjct: 241 GLATHEVNFTIIRE-EFKPNQRRACELCNQEGHEMKECQGLPKERANEL----DTIPVPQ 295
Query: 300 KP---YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ FL + L+EYL+ E + PF DLE +DD++FMCFFVGNDFLPH+P+LEI
Sbjct: 296 GAETEFIFLRLNILKEYLEKELWMTGLPFTFDLERAIDDWVFMCFFVGNDFLPHLPSLEI 355
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR----LH 412
REGAI+ L+ +YKK GYLT+ +L RV+ + +G ED IF+KR
Sbjct: 356 REGAIDRLIRLYKKAVYKTKGYLTENGVVNLERVQLMMTDLGEAEDEIFKKRRTTELGFR 415
Query: 413 QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
QR+ ER KR+++ + + VP + + GPS S QQ LD
Sbjct: 416 QRNKERNKRQRS-----------SNAPAFVPGGVLAPTPITGGPSSSSAQQI-----LDQ 459
Query: 473 GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD 532
+ R SS +N+ ++ + FK + D
Sbjct: 460 RRDA--------RTSS----------RDNANQSAADAMRASFKGGEGRGTKRGHGEEEED 501
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
++D V+L E GWKERYY KF+ P + R VV Y EGLCWV+ YYY+G SW
Sbjct: 502 EDKDDTVRLWEDGWKERYYRNKFD--VPSSDHDFRAKVVACYVEGLCWVLRYYYQGCASW 559
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
+W++PYHYAPFASD D+ FE G PF P QL+ VFP+AS + LP+ +R+ M D
Sbjct: 560 KWYFPYHYAPFASDFLDIKDLPNDFEKGTEPFHPLEQLMSVFPAASGNFLPDSWREKMVD 619
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
+SPI D YP DF++D+NGK+Y+WQG+A LPF+DE RLL + + LT E +RNS
Sbjct: 620 IDSPIIDLYPDDFQIDLNGKKYAWQGVALLPFVDEHRLLTTLAGVYDNLTPIEKKRNSNG 679
Query: 712 ADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-----PCAG 766
D LFV HPL Y + E+ E + P L+ G+ G I G
Sbjct: 680 PDRLFVGKHHPL----YNFIRELYETNSLEQAEPDTDMCPSLAHGVRGKIGNDEFVTLPG 735
Query: 767 DPHPPVFRSPVASMEDIMGNQVL 789
PH +SPV + DI + VL
Sbjct: 736 RPH----KSPVPLLRDIPESYVL 754
>gi|345562792|gb|EGX45805.1| hypothetical protein AOL_s00117g10 [Arthrobotrys oligospora ATCC
24927]
Length = 1102
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/787 (44%), Positives = 487/787 (61%), Gaps = 41/787 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
+ VPAF+RWL++KYP +++ V+E P IDG +IPVDT+ PNPNG E DNLYLDMNGI+H
Sbjct: 46 LSVPAFFRWLSQKYPKIISPVLEALPQEIDGHEIPVDTTGPNPNGEELDNLYLDMNGIVH 105
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP P T E+ +F Y +R+ MVRPRK+L MA+DGVAPRAKMNQQRSRRFR
Sbjct: 106 PCSHPEDRPPPETEQEMMLEVFRYTERVVAMVRPRKVLMMAVDGVAPRAKMNQQRSRRFR 165
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++++A + + + +G + + +DSN ITPGT FM +LSIAL+Y++
Sbjct: 166 SAQEAKEKEEQVAEFVKLLASKGTDIDSNLQKKGWDSNAITPGTPFMDILSIALKYWVAH 225
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+LN DPGW K+K+I+SD++VPGEGEHKIM +VR QR+ P +DPNTRH +YGLDADLIML
Sbjct: 226 KLNTDPGWAKLKIIISDSSVPGEGEHKIMEFVRGQRSHPEHDPNTRHVIYGLDADLIMLG 285
Query: 241 LATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF +LRE VF + + C +C Q GH A C GKA+ K GEFDEK P+
Sbjct: 286 LATHEPHFRVLREDVFAQDSKPRVCKICNQKGHRAEECTGKAREKEGEFDEKSK--ANPR 343
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +L + LREYL E +P F+ DLE +DD++F+CFFVGNDFLPH P+LEIR+
Sbjct: 344 KPFIWLDVGILREYLAVELHVPGLSFQWDLERAIDDWVFLCFFVGNDFLPHFPSLEIRDA 403
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
I+ L +++++ A+ G++T +L R + + + ED IF+KR ++ +R
Sbjct: 404 GIDTLTSIWRENLAAMKGFVTTDGNVNLERAQFILDGLAKQEDAIFRKRRQVEERREANA 463
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRL-----ASGPSPSPYQQSECVGRLDNGK 474
KR K Q ++ + V V R R+ A+ P +P S+ +L++
Sbjct: 464 KRRKLQEEANNN-----SGNDKVSVHRGKSERIPTAHPANIPLFAPNDHSDKTKQLNHDV 518
Query: 475 -------GTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL-RDKS 526
T+ +K + A + + S + P E + + + + +L + K
Sbjct: 519 VVNRAEIRTANYANKSAAAALKAQLLQNTITTNPSTDEQPAETEAQPETEGASVLGKRKL 578
Query: 527 DAFNSDNPEE------------DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
D +D+ + D VKL EPG+++RYYE+KF P R++V Y
Sbjct: 579 DTMQADSGNQTPIEAAPGEGNADTVKLWEPGYRDRYYEQKFG--RPPSDTNFRREVANAY 636
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
EGLCWV+ YY++G SW W+YPYHYAPFA D +++ + I+F LG PFKPF QL+GV P
Sbjct: 637 VEGLCWVLLYYFQGCPSWTWYYPYHYAPFAQDFENIGELKINFTLGKPFKPFEQLMGVLP 696
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
+AS H +P+ + LMT+ NS I DFYP DF +D+NGK+++WQG+A LPFIDE RLLD +
Sbjct: 697 AASKHNIPKAFWPLMTEENSEIIDFYPEDFPIDLNGKKFAWQGVAILPFIDETRLLDAMN 756
Query: 695 KIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELS 754
KI + EE RN + ++L SHPL DE Q K V+ L+P LS
Sbjct: 757 KIYPQIPAEEKERNEMGNELLLFSESHPL------YDELACQFFSKRAVDGDHELDPRLS 810
Query: 755 DGMNGYI 761
+G++G +
Sbjct: 811 EGLSGGV 817
>gi|307204797|gb|EFN83355.1| 5'-3' exoribonuclease 2-like protein [Harpegnathos saltator]
Length = 880
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/763 (47%), Positives = 480/763 (62%), Gaps = 39/763 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + IE++PV DGV IPV+++ PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPVNADGVCIPVNSADPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ + E +R+R E +G LPP+ + FDSN ITPGT FM+ LS L YYIH
Sbjct: 121 ASKETTEKIDEIQRIRTELSLKGASLPPEKPKEAHFDSNCITPGTPFMSRLSACLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW IK+ILSDANVPGEGEHKIM ++R QR+ P +DPNT+H L G DADLIML
Sbjct: 181 ERLNNDPGWRNIKIILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH +C G + E + G E
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMRDCTGAEPNQKEEENAYGSEC---- 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + LREYL+ E +PN PF+ D E VDD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 296 -QFIFVRLNVLREYLERELSMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK GG+LTD +L RV+ + +G ED IF+KR +
Sbjct: 355 AIDRLVTLYKKAVYKTGGFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKR---QENELAFK 411
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+REK + RR + + +P +F + L P + E G+ +
Sbjct: 412 QREKDKKRRHEIISNFKP--KWIPAGQFAPTALGQAVKPIENARYEAYQMRVQGRNYN-- 467
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
T A A ++ E+ + K + +++ + D + D D+V
Sbjct: 468 -----------TNVAENKNANHALESMLRPENTSNKGQKRKI--ESVDPESDDEQAHDEV 514
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+K+RYYE KF + R +V L+Y +GLCWV+ YYY+G SW+W++PYH
Sbjct: 515 RLWEDGFKDRYYESKFGVSP--DNLAFRNNVALQYVQGLCWVLRYYYQGCASWRWYFPYH 572
Query: 600 YAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD ++ + FE G PF+P QL+ VFP+ASS +P + KLM+DP S I D
Sbjct: 573 YAPFASDFINIGGLSTEFEKGTIPFRPLEQLMAVFPAASSKHVPVPWAKLMSDPRSSIID 632
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF++D+NGK+++WQG+A LPF+DE RL + +LTE E +RN D L+V
Sbjct: 633 FYPEDFKIDLNGKKFAWQGVALLPFVDEQRLFKALASYYDSLTEAEKKRNVRGDDRLYVG 692
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
+ + T + K+ I +RVE + L+ + DGM G I
Sbjct: 693 MGN-------TGYNYIKKTYI-DRVEFDKELDIRI-DGMRGTI 726
>gi|390354844|ref|XP_795068.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Strongylocentrotus
purpuratus]
Length = 999
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/803 (46%), Positives = 485/803 (60%), Gaps = 63/803 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL++KYP +V +EE+ +D V+IPVDT++PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCLEEKAKEVDEVRIPVDTTQPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP DE+ + +F YIDRL +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPENKPAPKDEDEMMREIFLYIDRLISIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKL-PPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK++ D + R+R E G L PPK+ FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKESRDKRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYIT 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN+DPGW+ IKVILSDAN PGEGEHKIM Y+R QR P +DPNT HC+ G DADLIML
Sbjct: 181 ERLNSDPGWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCMCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHEV+F+I+RE F P Q+ C LC Q GH C+G K +A E D + VP+
Sbjct: 241 GLATHEVNFTIIRE-EFKPNQRRACELCNQEGHEMKECQGLPKERANEL----DTIPVPQ 295
Query: 300 KP---YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ FL + L+EYL+ E + PF DLE +DD++FMCFFVGNDFLPH+P+LEI
Sbjct: 296 GAETEFIFLRLNILKEYLEKELWMTGLPFTFDLERAIDDWVFMCFFVGNDFLPHLPSLEI 355
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR----LH 412
REGAI+ L+ +YKK GYLT+ +L RV+ + +G ED IF+KR
Sbjct: 356 REGAIDRLIRLYKKAVYKTKGYLTENGVVNLERVQLMMTDLGEAEDEIFKKRRTTELGFR 415
Query: 413 QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
QR+ ER KR+++ + + VP + + GPS S QQ LD
Sbjct: 416 QRNKERNKRQRS-----------SNAPAFVPGGVLAPTPITGGPSSSSAQQI-----LDQ 459
Query: 473 GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD 532
+ R SS +N+ ++ + FK + D
Sbjct: 460 RRDA--------RTSS----------RDNANQSAADAMRASFKGGEGRGTKRGHGEEEED 501
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
++D V+L E GWKERYY KF+ P + R VV Y EGLCWV+ YYY+G SW
Sbjct: 502 EDKDDTVRLWEDGWKERYYRNKFD--VPSSDHDFRAKVVACYVEGLCWVLRYYYQGCASW 559
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
+W++PYHYAPFASD D+ FE G PF P QL+ VFP+AS + LP+ +R+ M D
Sbjct: 560 KWYFPYHYAPFASDFLDIKDLPNDFEKGTEPFHPLEQLMSVFPAASGNFLPDSWREKMVD 619
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
+SPI D YP DF++D+NGK+Y+WQG+A LPF+DE RLL + + LT E +RNS
Sbjct: 620 IDSPIIDLYPDDFQIDLNGKKYAWQGVALLPFVDEHRLLTTLAGVYDNLTPIEKKRNSNG 679
Query: 712 ADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS-----PCAG 766
D LFV HPL Y + E+ E + P L+ G+ G I G
Sbjct: 680 PDRLFVGKHHPL----YNFIRELYETNSLEQAEPDTDMCPSLAHGVRGKIGNDEFVTLPG 735
Query: 767 DPHPPVFRSPVASMEDIMGNQVL 789
PH +SPV + DI + VL
Sbjct: 736 RPH----KSPVPLLRDIPESYVL 754
>gi|239607237|gb|EEQ84224.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ER-3]
gi|327351196|gb|EGE80053.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1031
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/786 (44%), Positives = 487/786 (61%), Gaps = 60/786 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P T +++ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E +Q + G L + ++ +DSNVITPGT FM +L+ AL+
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQPGH+A C+G AK K GEFDEKG
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEKNGEFDEKGKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 S--PLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ +GGYLT L R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTEER 418
Query: 415 HAERI-----------------KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS 457
KR + + + EP+ P L+ + H SR
Sbjct: 419 KNANAKRRKEEERFREEERSRKKRRSSPSYGSMENEPVPPP--LIVPGKGHISR------ 470
Query: 458 PSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAK 517
E + +G + + + S+ A + + +V+ T E+ + +AK
Sbjct: 471 ----ADRELTHAMVVNRGAVYKANMANK-SAAAVLKSQLVKGSGDAATPDVEDSADGRAK 525
Query: 518 LKE---LLRDKSDAFNSDNPEE-------------DKVKLGEPGWKERYYEEKFNAKTPE 561
L + K+DA ++ E D V+L E G+ +RYYE+KF +
Sbjct: 526 NTSPLSLGKRKADALETETESETPKKPQDNDELPPDTVRLWEDGYADRYYEQKF--RVDP 583
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
+ E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D DL + NI F G
Sbjct: 584 KDTEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLGKMNIEFSRGA 643
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
PFKPF QL+GV P+AS+HA+PE + LM+DP S I DFYP +F +D+NGK+++WQG+A L
Sbjct: 644 PFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEEFPIDLNGKKFAWQGVALL 703
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASIYTLDEHCKQL 737
PFIDE RLL ++K L+ EE RN++ ++LF+ HP L+A+ Y+ + L
Sbjct: 704 PFIDEKRLLLAMEKRYPLLSSEEHARNTMGREVLFLSDRHPLYDNLTANFYSKKQGTPIL 763
Query: 738 KIKERV 743
K+ RV
Sbjct: 764 KLNMRV 769
>gi|321474178|gb|EFX85144.1| hypothetical protein DAPPUDRAFT_194028 [Daphnia pulex]
Length = 827
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/727 (49%), Positives = 455/727 (62%), Gaps = 52/727 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEE----PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVPAF+RWL KYP V+ D IEE+ P DG +PVD SKPNPNG+E+DNLYLDMN
Sbjct: 1 MGVPAFFRWLTVKYPSVICDCIEEKVRHGP---DGKALPVDVSKPNPNGVEFDNLYLDMN 57
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
GIIHPC HPEDRPAP DE+ +F+ IDR+F +VRPRKLLYMAIDGVAPRAKMNQQRS
Sbjct: 58 GIIHPCTHPEDRPAPRNEDEMMVAIFECIDRMFAIVRPRKLLYMAIDGVAPRAKMNQQRS 117
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQ 175
RRFRASK+ A+ +R+ G +P KS + FDSN ITPGT FM LS L
Sbjct: 118 RRFRASKEIAEKVMTIATVRESLMARGAYVPSEKSKGEHFDSNCITPGTPFMHRLSACLH 177
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YY+H RL NDPGW+ + VILSDANVPGEGEHKIM Y+R QR P +DPNTRH L G DAD
Sbjct: 178 YYVHDRLRNDPGWKNVSVILSDANVPGEGEHKIMDYIRRQRAQPSHDPNTRHVLCGADAD 237
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML LATHE +F+I+RE F P + C +C Q GH +C+G + K GE DE G +
Sbjct: 238 LIMLGLATHEPNFTIIRE-EFKPNKPRPCEICNQIGHDLNDCQGAERTKYGENDEIGPNI 296
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ Y F+ ++ LREYL+ E R+PN PFE DLE +DD++FMCFFVGNDFLPH+P+LE
Sbjct: 297 AA-EQNYIFVRLYVLREYLERELRMPNLPFEYDLERAIDDWVFMCFFVGNDFLPHLPSLE 355
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
IREGAI+ L+ +YK G++TD +L RV+ + +G ED IF+KR
Sbjct: 356 IREGAIDRLVNLYKDCVYKTKGWVTDSGFVNLERVQIILSQLGHAEDEIFRKRQEDELSF 415
Query: 416 AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKG 475
+R++ + RF G G P+ Q +
Sbjct: 416 RKRMRNKN---------------------KRFGG---GGGSRPAHLPQGQFA-------- 443
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
P V R S +I A E + Q E KLK +LR + + D+
Sbjct: 444 ----PRAVGRGFSNPSITNAHQEI---LQGRQQAQNTEAAIKLKAMLRSAVNDDDEDDFS 496
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
D+V+L E G+KERYYE KF P EE R V L Y GLCWV+ YYY+GV SW+WF
Sbjct: 497 HDEVRLWEDGFKERYYESKF--AVPPTDEEFRSKVALEYVRGLCWVLQYYYQGVPSWKWF 554
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
+PYHYAPFASD D+ F+ G PF+P QL+GVFP+AS +P+ + +LM DP S
Sbjct: 555 FPYHYAPFASDFLDISSVITVFKKGTKPFRPLEQLMGVFPAASRSHVPQPWGELMVDPES 614
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYP DF++D+NGK+++WQG+A LPF+DE RL VK + LTE+E RRN + +
Sbjct: 615 PIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLKKAVKSLFDELTEDEKRRNVLGENQ 674
Query: 715 LFVLLSH 721
+FV H
Sbjct: 675 IFVGKHH 681
>gi|116204849|ref|XP_001228235.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
gi|115311955|sp|Q2GNZ6.3|XRN2_CHAGB RecName: Full=5'-3' exoribonuclease 2
gi|88176436|gb|EAQ83904.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
Length = 1039
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/812 (45%), Positives = 495/812 (60%), Gaps = 68/812 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ V+EE+ +V+ DG +PVD ++PNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVVEEKALVMEDGTVVPVDATQPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI-DGVAPRAKMNQQRSRR 118
HPC HPEDRPAP+ +E+ +F Y +R+ MVRPRKLL +A+ DGVAPRAKMNQQRSRR
Sbjct: 61 HPCSHPEDRPAPSDEEEMMVEVFKYTERVVNMVRPRKLLMIAVADGVAPRAKMNQQRSRR 120
Query: 119 FRASKDAADSAAEEERLRQEFERE----GRKLPPKSD-SQVFDSNVITPGTEFMAVLSIA 173
FRA++DA + ++++L + ++E ++ P ++ + FDSN ITPGT FM +L+ +
Sbjct: 121 FRAAQDAKEKEEDKQQLLKMLQKEKGSTAKEEPIETVVKKAFDSNSITPGTPFMDILAAS 180
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+ +LN DP W K+KVI+SDA VPGEGEHKIM +VR QRN P +DPNTRH +YGLD
Sbjct: 181 LRYWCAYKLNTDPAWAKMKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLD 240
Query: 234 ADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML LATHE HF +LRE V F G+ C LCGQ GH NC G+AK KAGEFDEK
Sbjct: 241 ADLIMLGLATHEPHFRVLREDVFFQQGKARMCKLCGQKGHDERNCRGEAKEKAGEFDEK- 299
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ P KP+ +LH+ LREYL E IPN PF DLE +DD++FMCFFVGNDFLPH+P
Sbjct: 300 -DKAEPLKPFIWLHVSILREYLAIELNIPNLPFRWDLERAIDDWVFMCFFVGNDFLPHLP 358
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
LEIRE I LMA++K +GGY+T L R ++ + + ED IF++R
Sbjct: 359 ALEIRENGIETLMAIWKDNLPVMGGYVTKDGHVDLDRAQYILSGLAKQEDSIFRRRKETE 418
Query: 413 QRHAERIKREKAQARRGDDV-----EPLA-------QPDSLVPVSRFHGSRLASGPSPSP 460
R KR K ++G++ PL+ P++ P + +AS P P
Sbjct: 419 DRREAGFKRRKLNNQQGNNRGGAHDSPLSGRGGRKGAPEANGPPVGMNLFPVASIPKPV- 477
Query: 461 YQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD-PQENKEEFK---- 515
V R + ++ K + I + + + + E D P+E E K
Sbjct: 478 ITHDMVVNRANVANKSAASVLK-------SQIQSLVAQTQEKPEGDEPKEENPEAKTPPS 530
Query: 516 --AKLKELLRDKSDAFNSDNPEE--------------DKVKLGEPGWKERYYEEKFNAKT 559
K K L ++ A SD + D V+L E G+ +RYYE+KF K
Sbjct: 531 ALGKRKAELIEEGTATASDAASDTETPATTSSEEGPIDTVRLWEEGYADRYYEQKF--KV 588
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ R V Y EGL WV+ YY++G SW+WFYPYHYAPFA+D DL + ISFE
Sbjct: 589 DAKDIAFRHKVARAYVEGLAWVLMYYFQGCPSWEWFYPYHYAPFAADFVDLGKMKISFEK 648
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G +PF QL+ V P+AS HA+PE + LMT +SPI DFYP DFE+D+NGK+ SWQGIA
Sbjct: 649 GRISRPFEQLMSVLPAASRHAIPEVFHDLMTQEDSPILDFYPEDFEIDLNGKKMSWQGIA 708
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP-----LSASIYTLDEHC 734
LPFI+ RLLD +K H L+ E+ RN+ D+L + SHP +S+ Y+ +
Sbjct: 709 LLPFIEMPRLLDAMKTKSHLLSAEDKARNAPGHDVLLISDSHPGLYEDISSHFYSKKQAV 768
Query: 735 KQLKIKERVEVKERLNPELSDGMNGYISPCAG 766
+ K L+P+ SDG++G + G
Sbjct: 769 PEFK----------LDPKRSDGLSGKVRKIEG 790
>gi|261200841|ref|XP_002626821.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
gi|239593893|gb|EEQ76474.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
Length = 1031
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/786 (44%), Positives = 486/786 (61%), Gaps = 60/786 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P T +++ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E +Q + G L + ++ +DSNVITPGT FM +L+ AL+
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQPGH+A C+G AK K GEFDEKG
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEKNGEFDEKGKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 S--PLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ +GGYLT L R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTEER 418
Query: 415 HAERI-----------------KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS 457
KR + + + EP+ P L+ + H SR
Sbjct: 419 KNANAKRRKEEERFREEERSRKKRRSSPSYGSMENEPVPPP--LIVPGKGHISR------ 470
Query: 458 PSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAK 517
E + +G + + + S+ A + + +V+ T E+ + AK
Sbjct: 471 ----ADRELTHAMVVNRGAVYKANMANK-SAAAVLKSQLVKGSGDAATPDVEDSADGGAK 525
Query: 518 LKE---LLRDKSDAFNSDNPEE-------------DKVKLGEPGWKERYYEEKFNAKTPE 561
L + K+DA ++ E D V+L E G+ +RYYE+KF +
Sbjct: 526 NTSPLSLGKRKADALETETESETPKKPQDNDELPPDTVRLWEDGYADRYYEQKF--RVDP 583
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
+ E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D DL + NI F G
Sbjct: 584 KDTEFRHKVARSYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLGKMNIEFSRGA 643
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
PFKPF QL+GV P+AS+HA+PE + LM+DP S I DFYP +F +D+NGK+++WQG+A L
Sbjct: 644 PFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEEFPIDLNGKKFAWQGVALL 703
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASIYTLDEHCKQL 737
PFIDE RLL ++K L+ EE RN++ ++LF+ HP L+A+ Y+ + L
Sbjct: 704 PFIDEKRLLLAMEKRYPLLSSEEHARNTMGREVLFLSDRHPLYDNLTANFYSKKQGTPIL 763
Query: 738 KIKERV 743
K+ RV
Sbjct: 764 KLNMRV 769
>gi|402883353|ref|XP_003905184.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Papio anubis]
Length = 971
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/789 (47%), Positives = 490/789 (62%), Gaps = 56/789 (7%)
Query: 9 WLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDR 68
W++E+ ++++ + P +GVKIPVD SKPNPN +E+DNLYLDMNGIIHPC HPED+
Sbjct: 32 WVSEEVQRLLSNACQ--PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDK 89
Query: 69 PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADS 128
PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++
Sbjct: 90 PAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEA 149
Query: 129 AAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGW 188
A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW
Sbjct: 150 AVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGW 209
Query: 189 EKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHF 248
+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F
Sbjct: 210 KNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNF 269
Query: 249 SILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIW 308
+I+RE F P + C LC Q GH +CEG + K G+ DE D + + + FL +
Sbjct: 270 TIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLN 328
Query: 309 TLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVY 368
LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +Y
Sbjct: 329 VLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIY 388
Query: 369 KKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARR 428
K GGYLT+ +L+RV+ + AVG ED IF+KR R K ++ + +R
Sbjct: 389 KNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKR 448
Query: 429 GDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPH-K 482
+P P ++ GS++AS P + Y+ R+ N S P+
Sbjct: 449 D---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSSPSISPNTS 500
Query: 483 VPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG 542
S + IG +AE+S +S+ ED V+L
Sbjct: 501 FTSDGSPSPIGGIKRKAEDS---------------------------DSEPEPEDNVRLW 533
Query: 543 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAP
Sbjct: 534 EAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAP 591
Query: 603 FASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
FASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP
Sbjct: 592 FASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYP 651
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 721
DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV H
Sbjct: 652 EDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHH 711
Query: 722 PLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASM 780
PL I L Q E V+V PEL G+ G S P + SPV +
Sbjct: 712 PLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPML 763
Query: 781 EDIMGNQVL 789
D+ N V+
Sbjct: 764 RDLTQNTVV 772
>gi|449528758|ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 373
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/368 (87%), Positives = 348/368 (94%), Gaps = 1/368 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLAEKYPLVV DVIEEEPVVIDG+ IPVDTSKPNPN LE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP+PTTF EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFSEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDA D+AAEE RLR+EFE+EGRKLPPK +SQVFDSNVITPGT+FMAVLSIALQYY+H+
Sbjct: 121 AAKDAIDAAAEETRLREEFEKEGRKLPPKEESQVFDSNVITPGTDFMAVLSIALQYYVHI 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ IKVILSDANVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILRE+VFTPGQQ+KCFLCGQ GH AA+CEGKAKRK+GEFDEK +EV + KK
Sbjct: 241 LATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDEKVEEVTI-KK 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
PYQFLHIWTLREYL+YE RIPNPPF ID+E IVDDF+FMCFFVGNDFLPHMPTLEIRE
Sbjct: 300 PYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPHMPTLEIREVN 359
Query: 361 INLLMAVY 368
+ L++ +Y
Sbjct: 360 LMLVLTIY 367
>gi|440911591|gb|ELR61240.1| 5'-3' exoribonuclease 2, partial [Bos grunniens mutus]
Length = 926
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/773 (47%), Positives = 484/773 (62%), Gaps = 56/773 (7%)
Query: 26 PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYI 85
P +GVKIPVD SKPNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+YI
Sbjct: 1 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 60
Query: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK 145
DRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++ E++R+R+E +G
Sbjct: 61 DRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAEIEKQRVREEILAKGGY 120
Query: 146 LPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGE 205
LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+ PGEGE
Sbjct: 121 LPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGE 180
Query: 206 HKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCF 265
HKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C
Sbjct: 181 HKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCG 239
Query: 266 LCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPF 325
LC Q GH +CEG + K G+ DE D + + + F+ + LREYL+ E + + PF
Sbjct: 240 LCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEGEFIFIRLSVLREYLERELTMASLPF 299
Query: 326 EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP 385
D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+
Sbjct: 300 TFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYV 359
Query: 386 SLRRVEHFIQAVGSYEDRIFQKR-------ARLHQRHAERIKREKAQARRGDDVEPLAQP 438
+L+RV+ + AVG ED IF+KR R + +R+KR++ G + P A
Sbjct: 360 NLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPSFSPGGILTPHALG 419
Query: 439 DSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVE 498
P GS++AS P + Y+ R+ N S V
Sbjct: 420 SRSSP-----GSQVASNPRQAAYEM-----RMQNNLSPS-------------------VS 450
Query: 499 AENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAK 558
SF +D + + ++ K+D +S+ ED V+L E GWK+RYY+ KF+
Sbjct: 451 PNTSFTSDGSPSP-------RGGIKRKADDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVD 503
Query: 559 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 618
+E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + + FE
Sbjct: 504 AADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFE 561
Query: 619 LG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 677
G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGKRY+WQG
Sbjct: 562 KGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKRYAWQG 621
Query: 678 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQL 737
+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L +
Sbjct: 622 VALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL----YKT 677
Query: 738 KIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
E V+V PEL G+ G S P V SP+ ++D+ N V+
Sbjct: 678 GSTESVDVP----PELCHGIQGKFSLDEEAVLPNQVVCSPIPVLKDLTHNAVI 726
>gi|198426685|ref|XP_002129696.1| PREDICTED: similar to 5-3 exoribonuclease 2 [Ciona intestinalis]
Length = 886
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/811 (46%), Positives = 497/811 (61%), Gaps = 71/811 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KY +V EE+ IDGV IPVDTS PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYSSIVIHCNEEKAKEIDGVTIPVDTSLPNPNDIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP E+ +FD IDRLF +VRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPAPKNEQEIMIAIFDSIDRLFSIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLP---PKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
ASK+ + + +R E R G +LP PK++ FDSN ITPGTEFM L+ L++Y
Sbjct: 121 ASKEGVEQTELKASIRAELLRNGMRLPEVDPKAER--FDSNCITPGTEFMFRLAACLRFY 178
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I RLNNDPGW I+VILSDANVPGEGEHKIM ++R QR P +DPNT HC+ G DADLI
Sbjct: 179 IIDRLNNDPGWRNIEVILSDANVPGEGEHKIMDFIRKQRGQPDHDPNTHHCICGADADLI 238
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML LATHE +F+I+RE F P Q C +C Q GH +C G + ++ E + VV
Sbjct: 239 MLGLATHEPNFTIIRE-EFKPNQPRPCGICAQYGHEMTDCCGLPRDQSDELN------VV 291
Query: 298 PKKP-----YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+P Y F+ I +REY+ E +P PF+ D E I+DD++ MCFFVGNDFLPH+P
Sbjct: 292 QSQPHAGTNYIFIRICVIREYIKLEMEMPGLPFKYDFENIIDDWVMMCFFVGNDFLPHLP 351
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR--AR 410
+LEIREGAI+ L+ +YK GGYLT K +L RVE + +G ED IF+KR +
Sbjct: 352 SLEIREGAIDKLVRLYKDIVHQTGGYLTCNGKVNLSRVEKIMMGIGKLEDEIFRKRRESD 411
Query: 411 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG-PSPSPYQQSECVGR 469
++ R E+ KR++ + +G S +P S+F + L SG SP+P
Sbjct: 412 VNYRAREKAKRQRTKRDQG---------PSYIPGSQFAPTPLGSGFESPNP--------- 453
Query: 470 LDNGKGT--SGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 527
L N K + R + L + A++ A + ++ S + E AK K+ D +
Sbjct: 454 LTNVKQSILEMRSKDLKNLDAAASLRAMLSKSSTSTQA------ESSAAKRKKEDNDDDE 507
Query: 528 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 587
+D V+L E GWKERY+ KFN + E R+ +V Y EGLCWV+ YYY+
Sbjct: 508 P-------DDDVRLWEDGWKERYFRAKFNVSMKD--FEFRRTLVRCYVEGLCWVLLYYYQ 558
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYR 646
G SW+WF+P+HYAPFASD D+ F P +P QL+ VFP AS LP +R
Sbjct: 559 GCASWKWFFPFHYAPFASDFFDISDLPNEFPTNTQPKRPLEQLMCVFPEASGQFLPTTWR 618
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
KLM DP SPI DFYP DF++D+NGK+Y+WQG+A LPF+DE R++ + ++ LT +E +
Sbjct: 619 KLMGDPESPIIDFYPEDFKIDLNGKKYAWQGVALLPFVDEDRMMSSLTRVYDDLTPQEEK 678
Query: 707 RNSIMADMLFVLLSHPLSASIYTLDE-HCKQLKIKERVEVKERLNPELSDGMNGYISPCA 765
RNS D LFV + HPL A + L E + E ++ +P L+ GM G +
Sbjct: 679 RNSRGNDYLFVGVHHPLHALLKGLYEGGTPPMSYDEAADI----DPGLAHGMAGKV---W 731
Query: 766 GDPHPPVFRSPVAS-------MEDIMGNQVL 789
D H V ++ V + ++ +M NQVL
Sbjct: 732 NDEHCKVGQTVVHAPVPIHNCLDSVMNNQVL 762
>gi|410954455|ref|XP_003983880.1| PREDICTED: 5'-3' exoribonuclease 2 [Felis catus]
Length = 1093
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/746 (49%), Positives = 472/746 (63%), Gaps = 57/746 (7%)
Query: 26 PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYI 85
P +GVKIPVD SKPNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+YI
Sbjct: 165 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 224
Query: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK 145
DRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E +G
Sbjct: 225 DRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILSKGGF 284
Query: 146 LPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGE 205
LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+ PGEGE
Sbjct: 285 LPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGE 344
Query: 206 HKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCF 265
HKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C
Sbjct: 345 HKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCG 403
Query: 266 LCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPF 325
LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E + + PF
Sbjct: 404 LCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPF 463
Query: 326 EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP 385
D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+
Sbjct: 464 TFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYV 523
Query: 386 SLRRVEHFIQAVGSYEDRIFQKR-------ARLHQRHAERIKREKAQARRGDDVEPLAQP 438
+L+RV+ + AVG ED IF+KR R + +R+KR++ G + P A
Sbjct: 524 NLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFSPGGILTPHALG 583
Query: 439 DSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIV 497
P GS++AS P + Y+ R+ N S P+ S + IG
Sbjct: 584 SRNSP-----GSQVASNPRQAAYEM-----RMQNNSSPSVSPNTSFTSDGSPSPIGGIKR 633
Query: 498 EAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNA 557
+AE+S +S+ ED V+L E GWK+RYY+ KF+
Sbjct: 634 KAEDS---------------------------DSEPEPEDNVRLWEAGWKQRYYKNKFDV 666
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 617
+E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + + F
Sbjct: 667 DAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDF 724
Query: 618 ELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
E G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQ
Sbjct: 725 EKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQ 784
Query: 677 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQ 736
G+A LPF+DE RL ++++ LT EE +RNS+ D+LFV HPL I L Q
Sbjct: 785 GVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFVGKHHPLHDFILEL----YQ 840
Query: 737 LKIKERVEVKERLNPELSDGMNGYIS 762
E V+V PEL GM G S
Sbjct: 841 TGSTEPVDVP----PELCHGMQGKFS 862
>gi|342889646|gb|EGU88669.1| hypothetical protein FOXB_00813 [Fusarium oxysporum Fo5176]
Length = 3523
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/803 (44%), Positives = 497/803 (61%), Gaps = 59/803 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ +YP +++ VIE++P+ + DG IPVDT++PNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSSRYPKIISPVIEDQPLTMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +++ G L +S+ V FDSN ITPGT FM +L+++L
Sbjct: 121 RSAQEAQEKEKDKQELIKLLKQQNGGNLTAESEETVLKKAFDSNSITPGTPFMDILALSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DPGW K+K+I+SDA VPGEGEHKIM++VR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF Q+ + C LCGQ GH A NC G+ K+K GE DEK
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEQKARLCKLCGQKGHDAQNCRGEEKKKDGEHDEKDK 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
V + KP+ +LH+ LREYL+ E +PN PF D+E VDD+IFMC FVGNDFLPH+P
Sbjct: 301 GVAL--KPFIWLHVAVLREYLEVELSVPNLPFRFDVERAVDDWIFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L ++K +GGY+T L R + + + ED IF++R
Sbjct: 359 LEIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILSGLAKQEDGIFKRRKEQED 418
Query: 414 RHAERIKREKAQARRG------------DDVEPLAQPDSLV--PVSRFHGSRLASGPSPS 459
R KR K Q + L P +++ P++ F SGP+
Sbjct: 419 RREANFKRRKLQNENNGRGGRQGGPAHPKKINGLENPANVLLQPITSF------SGPNEQ 472
Query: 460 PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFET-DPQENKEEFKAKL 518
V R S P S A++ A ++++ S T P E ++ + L
Sbjct: 473 RLTHDMIVNR-------SSAPDANVANKSAASVLKAQLQSQKSLSTAKPAEADQDSASAL 525
Query: 519 KELLR-----------DKSDAFNSDNPEE----DKVKLGEPGWKERYYEEKFNAKTPEER 563
+ D S+A P E D V+L E G+ +RYYE+KF+ K P++
Sbjct: 526 GKRKASSLEEGDGSTPDTSNAPTPAAPAEEGPVDDVRLWEDGYADRYYEKKFH-KDPQDI 584
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 623
E R +V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D +D+D+ ISFE G
Sbjct: 585 E-FRHEVARAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFQDIDKMKISFEKGRIS 643
Query: 624 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 683
KPF QL+ V P+AS HALPE + LM +P S I DFYP DFE+D+NGK+ +WQG+A LPF
Sbjct: 644 KPFEQLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFEIDLNGKKMAWQGVALLPF 703
Query: 684 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERV 743
I+ RLL V+ L+ ++ RN + D+L +H S+Y D+ + K++
Sbjct: 704 IEMPRLLAAVQAKYPELSAADSARNEMGRDVLIFSEAHE---SLY--DDVLTKFYSKKQG 758
Query: 744 EVKERLNPELSDGMNGYISPCAG 766
+ K +LNP+ SDG++G + G
Sbjct: 759 DSKFKLNPKKSDGLSGKVEKKEG 781
>gi|170593371|ref|XP_001901438.1| 5'-3' exoribonuclease 2 [Brugia malayi]
gi|158591505|gb|EDP30118.1| 5'-3' exoribonuclease 2, putative [Brugia malayi]
Length = 937
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/764 (47%), Positives = 474/764 (62%), Gaps = 40/764 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL KYP VV D +EE+P ++G+++PV+T PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVVVDAVEEKPRDLNGIRVPVNTVDPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP P T +E+F +F+YIDRLF +VRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPCPKTEEEMFMLIFEYIDRLFAIVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+A + + R E EG LPP+ ++ FDSN ITPGT FMA L++AL+YY+H
Sbjct: 121 ASKEAIEKVEQIAETRLRLESEGYPLPPEKKTEHFDSNCITPGTPFMARLAVALRYYVHQ 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN+DPGW KI VILSDANVPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNSDPGWRKIAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P QQ C LCGQ GH +C+G A + + E + +
Sbjct: 241 LATHEPNFNIIRE-EFVPNQQRPCDLCGQYGHGLNDCKGLA---SDDNSECQSTPLQKET 296
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E IPN DLE +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 297 NFIFIRLPVLREYLERELHIPNCSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENA 356
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK + G+LTD + R + + +G ED IF+ R Q+ R K
Sbjct: 357 IDRLVKLYKDMVCEMKGHLTDSGIVHIERAQIILDKLGEVEDEIFKSRQEREQQFKRRNK 416
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+K + + LA P S +P S +GP + + R +
Sbjct: 417 EKKWRE------QALATP-SYIPSRGSLLSPQTNGPMYLSGSSTRTMARTARLEALDFTE 469
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE--DK 538
R + AT V A N E D ++K+E K NS + +E D+
Sbjct: 470 TVHTRAMNNATFH---VPAINISEKD--DHKQELKN-------------NSSSEDEVFDE 511
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E GWK+RYY+ KF + R+ V L Y EGLCWV+HYYY+G SW W+YP+
Sbjct: 512 VRLWEDGWKDRYYKSKFQVDGKD--IVFRRKVALAYVEGLCWVLHYYYQGCASWDWYYPF 569
Query: 599 HYAPFASDLKDLDQFNISFE-LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD + QF F PFKP QL+ VFP+AS LPE +++LM P SPI
Sbjct: 570 HYAPFASDFDAVSQFKPDFSAYTEPFKPLQQLMSVFPAASRMHLPEAWQELMISPVSPII 629
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP +F +D+NGK+ +WQG+A LPF+DE RLL+ + +E L E RNS D LFV
Sbjct: 630 DFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLNPMEDKLDAFEKERNSRGPDRLFV 689
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
SHP TL E+ + K+ ++ ++ L+ GM G +
Sbjct: 690 GPSHPFYNFAETLYENSR----KDSTDLA--IDTSLTFGMAGTV 727
>gi|225681905|gb|EEH20189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1044
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/785 (45%), Positives = 487/785 (62%), Gaps = 49/785 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P I+G ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEINGQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P+ +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERL-------RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
++++A + A+E+++ +Q ++ ++ + + +DSNVITPGT FM +L+ A
Sbjct: 121 SAQEAKE--ADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPGTPFMDILAAA 178
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y++ +LN DP WEK+KVI+SDA VPGEGEHKIM ++R QR+ P +DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDPNTRHVIYGLD 238
Query: 234 ADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK K GEFDEKG
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKG 298
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P
Sbjct: 299 KGSSL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
+L+IRE I+ L+A+++ A+GGYLT L R + +Q + ED IF++R +
Sbjct: 357 SLDIRENGIDTLIAIWRDNIPAMGGYLTKDGHVDLNRAQLILQGLAKQEDAIFRRRRQTE 416
Query: 413 QRHAERIKREKAQARRG-------------------DDVEPLAQPDSLVPVSRFHGSRLA 453
+R KR K + R +++ A P +VP + + SR
Sbjct: 417 ERKNANAKRRKEEERVREEERSRKRRRSSPTYGTMRNELSLPAPPPLMVP-GKGNLSRAE 475
Query: 454 SGPSPSPYQQSECV--GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK 511
+ S + L N + ++ + +S + V+AE+S + P +
Sbjct: 476 RELTHSMVVNRGAIYKANLANKSAAAAIKSQLLKGASSSNGDLTGVDAEDSVDGPPDASS 535
Query: 512 EEFKAKLKELLRDKSDAF---------NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 562
K K D N D+ D V+L E G+ +RYYE+KF +
Sbjct: 536 PTHLGKRKADALDTGTESETPSIKPQDNDDDLPPDTVRLWEEGYADRYYEQKFQVHPKDI 595
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 622
E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D L + NI F G P
Sbjct: 596 --EFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVGLGKMNIEFNRGAP 653
Query: 623 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 682
FKPF QL+GV P+AS+HA+PE + LM+DPNS I DFYP +F +D+NGK+++WQG+A LP
Sbjct: 654 FKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEIIDFYPEEFPIDLNGKKFAWQGVALLP 713
Query: 683 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASIYTLDEHCKQLK 738
FIDE RLL ++K H L+ EE RNS D+L V HP L+A+ Y+ + +LK
Sbjct: 714 FIDEKRLLVAMEKRYHLLSSEEHARNSTGRDVLLVSDRHPLYDNLTANFYSKKQGLSKLK 773
Query: 739 IKERV 743
+ RV
Sbjct: 774 LNMRV 778
>gi|67516851|ref|XP_658311.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|74598763|sp|Q5BFH3.3|XRN2_EMENI RecName: Full=5'-3' exoribonuclease 2
gi|40746327|gb|EAA65483.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|259489019|tpe|CBF88946.1| TPA: 5'-3' exoribonuclease 2 (EC 3.1.13.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFH3] [Aspergillus
nidulans FGSC A4]
Length = 1032
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/809 (44%), Positives = 498/809 (61%), Gaps = 63/809 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP +++ VIEE P ++G +IPVD + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSKKYPKIISSVIEELPQEVNGEEIPVDITGPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMIEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFER-----EGRK---LPPKSDSQVFDSNVITPGTEFMAVLSI 172
++++ A E++ +QEF+R G K L + + +DSNVITPGT FM +L+
Sbjct: 121 SAQE----AREQDEKKQEFQRMLAKQNGDKEQMLQEEVIQKTWDSNVITPGTPFMDILAA 176
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
+L+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR P +DPN RH +YGL
Sbjct: 177 SLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRASPEHDPNARHVIYGL 236
Query: 233 DADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML LATHE HF +LRE V F +Q C LCGQPGH A C G+AK K GEFDEK
Sbjct: 237 DADLIMLGLATHEPHFRVLREDVFFQESKQRTCHLCGQPGHKAEECRGQAKEKNGEFDEK 296
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
G + KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+
Sbjct: 297 GKGATL--KPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHL 354
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P+L+IRE I+ L+A+++ +GGYLT + L++ + +Q + ED IF++R +
Sbjct: 355 PSLDIREDGIDTLIAIWRDNIPLMGGYLTQDGRVDLKKAQLILQGLAKQEDAIFRRRRQA 414
Query: 412 HQRHAERIKR----------EKAQARR--GDDVEPLAQPDSLVPVSRFHGSR-------L 452
+R KR E+A+ RR + + P P S + +
Sbjct: 415 EERKLANEKRRKQEEKARNEERARKRRRSSPSYDAIESPTHAKPRSAGAAAAPPAGLELI 474
Query: 453 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 512
Q E + +G R + + S+ A + + ++ ++ +D E+
Sbjct: 475 TPARGELARQTRELTHSMVVNRGNVYRANMANK-SAAAVLKSKLLGGQDGQPSDDGESTA 533
Query: 513 EFKAKLKE----LLRDKSD-----AFNSDNPEE-----------DKVKLGEPGWKERYYE 552
E A+L L + K+D ++ P++ D V+L E G+ +RYYE
Sbjct: 534 ESDAQLDAAGPVLGKRKADEAEVGQLGTETPDKPEPAKADELPPDTVRLWEEGYADRYYE 593
Query: 553 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 612
+KF P+++ E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D D+
Sbjct: 594 QKFGV-DPQDK-EFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGD 651
Query: 613 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
+SFE G PFKP+ QL+GV P++S+HA+P+ + LMT+P+S I DFYP DF VD+NGK+
Sbjct: 652 MELSFEKGTPFKPYEQLMGVLPASSNHAIPKVFHSLMTEPDSEIIDFYPEDFPVDLNGKK 711
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 732
++WQG+ LPFIDE RLL + K LTE+E RN++ D+L + SHPL + +
Sbjct: 712 FAWQGVVLLPFIDEKRLLAAMSKKYPLLTEDEKARNTVGRDVLLLSESHPLYQDLVS--- 768
Query: 733 HCKQLKIKERVEVKERLNPELSDGMNGYI 761
K++ K +LN +SDG+ G +
Sbjct: 769 ---NFYSKKQGAPKYKLNMRVSDGLAGKV 794
>gi|417413149|gb|JAA52920.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Desmodus rotundus]
Length = 926
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/774 (47%), Positives = 486/774 (62%), Gaps = 56/774 (7%)
Query: 25 EPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDY 84
+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+Y
Sbjct: 1 QPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEY 60
Query: 85 IDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGR 144
IDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E +G
Sbjct: 61 IDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGG 120
Query: 145 KLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEG 204
LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+ PGEG
Sbjct: 121 FLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEG 180
Query: 205 EHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKC 264
EHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C
Sbjct: 181 EHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPC 239
Query: 265 FLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP 324
LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E + + P
Sbjct: 240 GLCNQFGHEVKDCEGLPREKMGKHDELADSLPCTEGEFIFLRLNVLREYLERELTMASLP 299
Query: 325 FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 384
F D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+
Sbjct: 300 FTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGY 359
Query: 385 PSLRRVEHFIQAVGSYEDRIFQKR-------ARLHQRHAERIKREKAQARRGDDVEPLAQ 437
+L+RV+ + AVG ED IF+KR R + +R+KR++ G + P A
Sbjct: 360 VNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPGGILTPHAL 419
Query: 438 PDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIV 497
P+ S++AS P + Y+ R+ N S P+
Sbjct: 420 GSRSSPI-----SQVASNPRQAAYEM-----RMQNNSSPSVSPN---------------- 453
Query: 498 EAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNA 557
SF +D + L + R K+D +S+ ED V+L E GWK+RYY+ KF+
Sbjct: 454 ---TSFTSDGS------PSPLGGIKR-KADDSDSEPEPEDNVRLWEAGWKQRYYKNKFDV 503
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 617
+E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + + F
Sbjct: 504 DAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDF 561
Query: 618 ELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
E G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQ
Sbjct: 562 EKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQ 621
Query: 677 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQ 736
G+A LPF+DE RL ++++ LT EE +RNS+ +D+LFV HPL I L Q
Sbjct: 622 GVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGSDVLFVGKYHPLYDFIVEL----YQ 677
Query: 737 LKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
E V+ L PEL G+ G S P + SPV + D+ N +
Sbjct: 678 TGSTEPVD----LPPELCHGIQGKFSLDEEAILPDQIVSSPVPVLRDLTQNTAI 727
>gi|332858060|ref|XP_001145469.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 5 [Pan troglodytes]
gi|397478697|ref|XP_003810676.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Pan paniscus]
Length = 1028
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/772 (47%), Positives = 481/772 (62%), Gaps = 52/772 (6%)
Query: 25 EPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDY 84
+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+Y
Sbjct: 103 QPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEY 162
Query: 85 IDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGR 144
IDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E +G
Sbjct: 163 IDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGG 222
Query: 145 KLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEG 204
LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+ PGEG
Sbjct: 223 FLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEG 282
Query: 205 EHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKC 264
EHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C
Sbjct: 283 EHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPC 341
Query: 265 FLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP 324
LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E + + P
Sbjct: 342 GLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLP 401
Query: 325 FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 384
F D+E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK GGYLT+
Sbjct: 402 FTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGY 461
Query: 385 PSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPV 444
+L+RV+ + AVG ED IF+KR R K ++ + +R +P P ++
Sbjct: 462 VNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPSGILTP 518
Query: 445 SRFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 499
GS++AS P + Y+ R+ N S P+
Sbjct: 519 HALGSRNSPGSQVASNPRQAAYEM-----RMQNNSSPSISPN------------------ 555
Query: 500 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
SF +D + L + R D+ + P ED V+L E GWK+RYY+ KF+
Sbjct: 556 -TSFTSDGS------PSPLGGIKRKAEDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDA 607
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + + FE
Sbjct: 608 ADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEK 665
Query: 620 G-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 678
G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+
Sbjct: 666 GTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGV 725
Query: 679 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLK 738
A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L Q
Sbjct: 726 ALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL----YQTG 781
Query: 739 IKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
E V+V PEL G+ G S P + SPV + D+ N V+
Sbjct: 782 STEPVDVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 829
>gi|449269264|gb|EMC80058.1| 5'-3' exoribonuclease 2, partial [Columba livia]
Length = 914
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/765 (47%), Positives = 482/765 (63%), Gaps = 48/765 (6%)
Query: 30 DGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLF 89
+GVK+P+DTSKPNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+YIDR+F
Sbjct: 6 NGVKVPIDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRIF 65
Query: 90 VMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK 149
+VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++++RQE +G LPP+
Sbjct: 66 NIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAEEKQKIRQEILSKGGILPPE 125
Query: 150 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
+ FDSN ITPGTEFM L+ L+YYI RLN+DPGW+ + VILSDA+ PGEGEHKIM
Sbjct: 126 EVKERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDPGWKNLTVILSDASAPGEGEHKIM 185
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ 269
Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C LC Q
Sbjct: 186 DYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCALCNQ 244
Query: 270 PGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDL 329
GH +C+G + K G+ D+ D + V ++ + F+ + LREYL+ E + + PF D
Sbjct: 245 MGHEVKDCQGLPREKQGKHDQFADSLPVAEQEFIFIRLCVLREYLERELTMASLPFTFDF 304
Query: 330 ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRR 389
E VDD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+ +L+R
Sbjct: 305 ERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGFVNLQR 364
Query: 390 VEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHG 449
V+ + AVG ED IF+KR R K ++ + +R QP + +P +F
Sbjct: 365 VQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKEKRKRMKRD-------QP-AFIPGGQFSP 416
Query: 450 SRLASGPSP---SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD 506
L + SP S +Q+ R+ + R + P S ++ +
Sbjct: 417 QALGNRSSPQAISNPRQAAFEMRMHD------RQNATPSSSPNTSLTS------------ 458
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
E L ++ K++ +S+ ED ++L E GWK+RYY+ KF+ +E+
Sbjct: 459 ------EGSPSLAGGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEK--F 510
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKP 625
R+ VV Y EGLCWV+ YYY+G SW W+YP+HYAPFASD + + FE G PFKP
Sbjct: 511 RRKVVQSYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKP 570
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
QL+GVFP+AS + LP +RKLMTDP S I DFYP DF +D+NGK+Y+WQG+A LPF+D
Sbjct: 571 LEQLMGVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVD 630
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEV 745
E RL ++++ LT EE+RRNS+ D+LFV HPL I +Q K K V
Sbjct: 631 ERRLRAALEEVYPDLTPEESRRNSLGGDVLFVGKHHPLCDFI------VEQYKTKNTEPV 684
Query: 746 KERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
+ PEL G+ G ++ P SPV + D+ N +
Sbjct: 685 D--IPPELCHGIQGKLTLNDNAVLPEQTVESPVPMLRDLTQNSAI 727
>gi|332021133|gb|EGI61520.1| 5'-3' exoribonuclease 2-like protein [Acromyrmex echinatior]
Length = 867
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/765 (47%), Positives = 484/765 (63%), Gaps = 41/765 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + IE++ V DGV IPV++++PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKVVSADGVCIPVNSAEPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A+K++ + E ER+R E +G LPP KS + FDSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKESTEKINEIERIRSELTLKGASLPPEKSKEEHFDSNCITPGTPFMARLSSCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L G DADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH C G + E + G E
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMRECTGAEPNQKPEENTYGSEC---- 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + LREYL+ E +PN PF+ D E VDD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 296 -QFIFVRLNVLREYLERELHMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+A+YK+ GG+LTD +L RV+ + +G ED IF+KR Q
Sbjct: 355 AIDRLVALYKRAVYKTGGFLTDSGDVNLDRVQLIMSELGDAEDEIFKKR---QQNELAFK 411
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+REK + +R + + + +P +F +P+P Q+ V ++N + + +
Sbjct: 412 QREKDKKKRNEIISSFKP--TWIPAGQF---------APTPLGQT--VKPIENARYEAYK 458
Query: 480 PHKVPR--LSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
R ++ A A E+ + NK + K K+ E+ + + D
Sbjct: 459 MRVQGRNYNTNAADNTNANNALESMLRPENSGNKGQ-KRKINEVSSNDDSDDDQ---AHD 514
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++P
Sbjct: 515 EVRLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGCASWRWYFP 572
Query: 598 YHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
YHYAPFASD ++ + FE G PF+P QL+GVFP+AS +P+ + KLMTDP S I
Sbjct: 573 YHYAPFASDFINIGGLSTEFEKGTVPFRPLEQLMGVFPAASRKHVPKPWAKLMTDPKSQI 632
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF++D+NGK+++WQG+A LPF+DE RL + +LTE E RN D L+
Sbjct: 633 IDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKMRNVRGDDRLY 692
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
V + + S + + ++ + VE+ DGM G +
Sbjct: 693 VGIEN--SGYNFVKGLYKNRIGFDKEVEIS-------IDGMRGTV 728
>gi|226289075|gb|EEH44587.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1049
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/784 (45%), Positives = 486/784 (61%), Gaps = 48/784 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P I+ ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEINEQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P+ +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERL-------RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
++++A + A+E+++ +Q ++ ++ + + +DSNVITPGT FM +L+ A
Sbjct: 121 SAQEAKE--ADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPGTPFMDILAAA 178
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y++ +LN DP WEK+KVI+SDA VPGEGEHKIM ++R QR+ P +DPNTRH +YGLD
Sbjct: 179 LRYWVAYKLNTDPAWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDPNTRHVIYGLD 238
Query: 234 ADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK K GEFDEKG
Sbjct: 239 ADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKG 298
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P
Sbjct: 299 KGSSL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLP 356
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
+L+IRE I+ L+A+++ A+GGYLT L R + +Q + ED IF++R +
Sbjct: 357 SLDIRENGIDTLIAIWRDNIPAMGGYLTKDGHVDLNRAQLILQGLAKQEDAIFRRRRQTE 416
Query: 413 QRHAERIKREKAQARRG-------------------DDVEPLAQPDSLVPVSRFHGSRLA 453
+R KR K + R +++ A P +VP + + SR
Sbjct: 417 ERKNANAKRRKEEERVREEERSRKRRRSSPTYGTMRNELSLPAPPPLMVP-GKGNLSRAE 475
Query: 454 SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKE 512
+ S + + + ++ K L ++ G V+AE+S + P +
Sbjct: 476 RELTHSMVVNRGAIYKANLANKSAAAAIKSQLLKGASSNGDLTGVDAEDSVDGPPDASSP 535
Query: 513 EFKAKLKELLRDKSDAF---------NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEER 563
K K D N D+ D V+L E G+ +RYYE+KF +
Sbjct: 536 THLGKRKADALDTGTESETPSIKPQDNDDDLPPDTVRLWEEGYADRYYEQKFQVHPKDI- 594
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 623
E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D L + NI F G PF
Sbjct: 595 -EFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVGLGKMNIEFNRGAPF 653
Query: 624 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 683
KPF QL+GV P+AS+HA+PE + LM+DPNS I DFYP +F +D+NGK+++WQG+A LPF
Sbjct: 654 KPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEIIDFYPEEFPIDLNGKKFAWQGVALLPF 713
Query: 684 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASIYTLDEHCKQLKI 739
IDE RLL ++K H L+ EE RNS D+L V HP L+A+ Y+ + +LK+
Sbjct: 714 IDEKRLLVAMEKRYHLLSSEEHARNSTGRDVLLVSDRHPLYDNLTANFYSKKQGLSKLKL 773
Query: 740 KERV 743
RV
Sbjct: 774 NMRV 777
>gi|302663765|ref|XP_003023520.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
gi|291187523|gb|EFE42902.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
Length = 1037
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/814 (44%), Positives = 495/814 (60%), Gaps = 77/814 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ V+EE+P IDG +IPVD +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVITPGTEFMAVLS 171
+++DA AE+E+ + EF ++ G+K + + ++ +D+NVITPGT FM +L+
Sbjct: 121 SAQDA---KAEDEK-KVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILA 176
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P YDPNTRH +YG
Sbjct: 177 LALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYG 236
Query: 232 LDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
LDADLIML L THE HF +LRE V F + C LCGQ GH+ C GKAK K GEFDE
Sbjct: 237 LDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDE 296
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
K + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMCFFVGNDFLPH
Sbjct: 297 K--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPH 354
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q + ED IF++R +
Sbjct: 355 LPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIFRRRRQ 414
Query: 411 LHQRHAERIK-----------------REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLA 453
+R K R+K + RG EP+ LV + SR
Sbjct: 415 TEERRNANAKRRQEEDRQRRNNNNDHARKKRRGSRG--AEPVPDIPPLVVPGKGELSR-- 470
Query: 454 SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE 513
+ + V R K L + G AE+ +T ++
Sbjct: 471 ---AERELTHAMVVNRGAVYKANMANKSAAAALKAQLLSGGT---AEDGVDTTNAQDSAP 524
Query: 514 FKAKLKELLRDKSDAFNSDN---------------------PEEDK-----VKLGEPGWK 547
+L + KSD F + N P+ED+ V+L E G+
Sbjct: 525 SGMPSSKLGKRKSDVFENSNTEAEAEEEDEEEEDTVEIPAKPKEDEMPPDTVRLWEDGYA 584
Query: 548 ERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 607
+RYYE+KF +P++ R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D
Sbjct: 585 DRYYEQKFGV-SPKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADF 642
Query: 608 KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 667
D+ + ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D NS I DFYP DF VD
Sbjct: 643 VDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVD 702
Query: 668 MNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
+NGK+++WQG+A LPFIDE RLL + K H L+EEE RN++ D+L + HPL S+
Sbjct: 703 LNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLLLSEKHPLYESL 762
Query: 728 YTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
K++V K +LN +S+G+ G +
Sbjct: 763 ------TANFYSKKQVSSKLKLNMRISEGLGGKV 790
>gi|427778459|gb|JAA54681.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Rhipicephalus
pulchellus]
Length = 856
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/723 (49%), Positives = 466/723 (64%), Gaps = 46/723 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP +VA +EE+P V+DGVKIPVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIVAHCVEEKPQVVDGVKIPVDTTKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP DE+ +F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPENKPAPKNEDEMMVDIFEYIDRIFSVVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSD-SQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK++A+ E R+R E G LPP+ D S+ FDSN ITPGT FM L+ L YYIH
Sbjct: 121 ASKESAEKVEEMSRIRAELRDRGVPLPPEKDKSEHFDSNCITPGTPFMDRLAKCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW+ I+VILSDANVPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 181 DRLNNDPGWKNIQVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD---------- 289
LATHE +F+I+RE F P Q C LCGQ GH +C+G K K GEFD
Sbjct: 241 GLATHEPNFTIIRE-EFKPNQPRPCELCGQLGHEMKDCQGLPKEKTGEFDELEKPIGSET 299
Query: 290 ---------EKGDEVVVPKKP------YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVD 334
EK E +KP + FL + L EYL+ E R+ N PF+ ++E +D
Sbjct: 300 EFIFLXXPKEKTGEFDELEKPIGSETEFIFLRLNVLHEYLERELRMDNLPFDFNIERAID 359
Query: 335 DFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI 394
D++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YKK GGYLT+ +L RV+ +
Sbjct: 360 DWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNLYKKAVYRTGGYLTENGFVALNRVQLIM 419
Query: 395 QAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLAS 454
+G ED IF++R + R+K +K + + + E A+P + P +F + +A
Sbjct: 420 SELGDAEDEIFKRRQQNELNFKRRMKEKKKRMKMEAESE--ARP-AWTPGGQF--APVAV 474
Query: 455 GPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEF 514
G +P Q + +G R + LS G G + P + +
Sbjct: 475 GQHVAPVQNARQEAHDMRRQGMEHRRN----LSDG---GGSNANGRLESMLRPAYSDSDV 527
Query: 515 KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ + R D+ + + D+V+L E GW+ERYY KF+ + R DV Y
Sbjct: 528 RGE----KRKHEDSSDEEEEPHDEVRLWEDGWRERYYVSKFDISP--DNVAFRHDVASAY 581
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVF 633
EGLCWV+ YYY+G SW+WF+PYHYAPFASD ++ I FE G PFKP QL+ VF
Sbjct: 582 VEGLCWVLRYYYQGCASWKWFFPYHYAPFASDFINVGDLKIEFERGTQPFKPMEQLMSVF 641
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS LP + LM DP+SPI DFYPTDF++D+NGK+Y+WQG+A LPF+DE RLL+ V
Sbjct: 642 PAASKQHLPLPWADLMDDPDSPIIDFYPTDFKIDLNGKKYAWQGVALLPFVDEKRLLETV 701
Query: 694 KKI 696
+ +
Sbjct: 702 QTV 704
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 89/141 (63%), Gaps = 6/141 (4%)
Query: 621 HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAK 680
PFKP QL+ VFP+AS LP + LM DP+SPI DFYPTDF++D+NGK+Y+WQG+A
Sbjct: 711 QPFKPMEQLMSVFPAASKQHLPLPWADLMDDPDSPIIDFYPTDFKIDLNGKKYAWQGVAL 770
Query: 681 LPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIK 740
LPF+DE RLL+ V+ + LTE+E +RN+ D+ +V H + + L E CK ++
Sbjct: 771 LPFVDEKRLLETVQTVYPHLTEDERKRNTRGDDVFYVRKGHRGYSYLVGLYEACKDYNME 830
Query: 741 ERVEVKERLNPELSDGMNGYI 761
+E P+ G+ G I
Sbjct: 831 FDLE------PKYFSGIGGKI 845
>gi|119495190|ref|XP_001264385.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
gi|119412547|gb|EAW22488.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
Length = 1057
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/820 (43%), Positives = 498/820 (60%), Gaps = 70/820 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE P I+G ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEELPYEINGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E R+ ++ G K+ + +V +DSNVITPGT FM +L+ +L+
Sbjct: 121 SAQEAKEADEKKEEFRKMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAASLR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR P +DPNTRH +YGLDAD
Sbjct: 181 YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K GEFDEK
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ KP+ +LH+ LREYL E +P F DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 SSL--KPFIWLHVSILREYLAAELYVPQQSFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEER 418
Query: 415 HAERIKREKAQARRGDDVEPLAQPDS---LVPVSRFHGSRLASGPSPSPYQQSECV--GR 469
KR K +A+ ++ + S P+ G R G +P Q E + GR
Sbjct: 419 KLANEKRRKQEAKAREEERARKRRRSSPTYEPMDSPVGHRAPRGGDAAPPNQLELITPGR 478
Query: 470 LDNGKGTSGRPH------------KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAK 517
+ + T H + S+ A + + +++ S + D +E EE +
Sbjct: 479 GELSRQTRELTHSMVVNRGAVYRANMANKSAAAVLKSKLMQGSQSGQ-DGEEKSEEATSN 537
Query: 518 LKELLRDKSDAFNSDNP-----------EE-------------------------DKVKL 541
E +D++D +P EE D V+L
Sbjct: 538 NDEPSQDQTDLTEQTSPSVLGKRKADLVEEDTEAGTPGRDSPAVPVAAKEDELPPDTVRL 597
Query: 542 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
E G+ +RYYE+KF P+++ E R V Y EGL WV+ YY++G SW W+YPYHYA
Sbjct: 598 WEEGYADRYYEQKFGV-DPQDK-EFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYA 655
Query: 602 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
PFA+D D+ I+F+ G PFKPF QL+GV P++S+HA+PE + LM++P S I DFYP
Sbjct: 656 PFAADFVDIGDMEINFDKGVPFKPFEQLMGVLPASSNHAIPEVFHDLMSNPESEIIDFYP 715
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 721
DF VD+NGK+++WQG+ LPFIDE RLL ++K LTE+E RNS+ ++L + +H
Sbjct: 716 EDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNSVGREVLLLSEAH 775
Query: 722 PLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
PL + K++ K +LN +SDG+ G +
Sbjct: 776 PLYQDL------VANFYSKKQAVQKYKLNMRISDGLAGKV 809
>gi|358372009|dbj|GAA88615.1| 5'->3' exoribonculease Dhp1 [Aspergillus kawachii IFO 4308]
Length = 1045
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/802 (45%), Positives = 507/802 (63%), Gaps = 63/802 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE P I+G ++PVDT++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEFPQEINGEEVPVDTTRPNPNGDEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P+ E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPSNEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E R+ ER+ G+K QV +DSNVITPGT FM +L+ AL+
Sbjct: 121 SAQEAREADEKKEEFRKMLERQNGKKEDEDMQEQVIQKTWDSNVITPGTPFMDILAAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGLDAD
Sbjct: 181 YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE +F +LRE V F + C LCGQ GH A C+G+AK K G+FDEKG
Sbjct: 241 LIMLGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEKNGQFDEKGKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ KP+ +L++ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 TSL--KPFIWLNVSILREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEER 418
Query: 415 HA--ERIKREKAQARR---------GDDVEPLAQPDSLVPVSRFHGSRLASGP------S 457
A E+ ++++AQAR + E P R G+ A+ P +
Sbjct: 419 RAANEKRRKQEAQAREEGARKRRKSSPNYEAYETPAGNPTGGRSKGAADAAPPNAVELIT 478
Query: 458 PSPYQQSECVGRLDNGKGTS-GRPHK--VPRLSSGATIGAAIVE-------AENSFET-- 505
P + + +L + T+ G +K + S+ A + + +++ +EN+ E+
Sbjct: 479 PQRGELTREARQLTHSMVTNRGAVYKANMANKSAAAILKSKLMKGSEAEEPSENTEESGS 538
Query: 506 ---DPQENKEEFKAKLKELLRDKSD---------------AFNSDNPE--EDKVKLGEPG 545
+P E K E + L + K+D A +S N E D V+L E G
Sbjct: 539 EAPEPSEEKTEEQTSPSVLGKRKADEVAEEAATTPTKKPSAGDSQNDELPPDTVRLWEEG 598
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+ +RYYE+KF PE++ E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+
Sbjct: 599 YADRYYEQKFGV-DPEDK-EFRHKVARAYAEGLAWVLRYYFQGCPSWTWYYPYHYAPFAA 656
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D D+ + + FE G PFKPF QL+GV P++S+HA+PE + LM+DP+S I DFYP DF
Sbjct: 657 DFVDIGEMELQFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMSDPDSEIIDFYPEDFP 716
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP--- 722
VD+NGK+++WQG+ LPFIDE RLL ++K L+++E RN + D+L + SHP
Sbjct: 717 VDLNGKKFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDEKLRNCVGRDVLLISESHPLYH 776
Query: 723 -LSASIYTLDEHCKQLKIKERV 743
L A+ Y+ + + I +R+
Sbjct: 777 DLVANFYSKKQGAPKYSINQRI 798
>gi|302509948|ref|XP_003016934.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
gi|291180504|gb|EFE36289.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
Length = 1038
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/812 (44%), Positives = 495/812 (60%), Gaps = 73/812 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ V+EE+P IDG +IPVD +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVITPGTEFMAVLS 171
+++DA AE+E+ + EF ++ G+K + + ++ +D+NVITPGT FM +L+
Sbjct: 121 SAQDA---KAEDEK-KVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILA 176
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P YDPNTRH +YG
Sbjct: 177 LALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYG 236
Query: 232 LDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
LDADLIML L THE HF +LRE V F + C LCGQ GH+ C GKAK K GEFDE
Sbjct: 237 LDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDE 296
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
K + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMCFFVGNDFLPH
Sbjct: 297 K--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPH 354
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q + ED IF++R +
Sbjct: 355 LPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIFRRRRQ 414
Query: 411 L---------------------HQRHAERIKREKAQARRGDDVEPLAQPDS--------- 440
+ HA + +R A D+ PL P
Sbjct: 415 TEERRNANAKRRQEEDRQRRNNNNDHARKKRRGSRGAEPVPDIPPLVVPGKGELSRAERE 474
Query: 441 ---LVPVSR---FHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGA 494
+ V+R + + + + Q G ++G T+ P G+ +G
Sbjct: 475 LTHAMVVNRGAVYKANMANKSAAAALKAQLLSGGTAEDGVDTTNAQDSAPSGIPGSKLGK 534
Query: 495 AIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK-----VKLGEPGWKER 549
++D EN +E ++ P+ED+ V+L E G+ +R
Sbjct: 535 R--------KSDVFENSNTEAEAEEEDEEEEDTVEVPAKPKEDEMPPDTVRLWEDGYADR 586
Query: 550 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 609
YYE+KF +P++ R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D D
Sbjct: 587 YYEQKFGV-SPKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVD 644
Query: 610 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
+ + ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D NS I DFYP DF VD+N
Sbjct: 645 IGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLN 704
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT 729
GK+++WQG+A LPFIDE RLL + K H L+EEE RN++ D+L + HPL S+
Sbjct: 705 GKKFAWQGVALLPFIDEKRLLAAMGKRYHLLSEEEQARNAMGKDVLLLSEKHPLYESL-- 762
Query: 730 LDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
K++V K +LN +S+G+ G +
Sbjct: 763 ----TANFYSKKQVSSKLKLNMRISEGLGGKV 790
>gi|46138403|ref|XP_390892.1| hypothetical protein FG10716.1 [Gibberella zeae PH-1]
gi|115311956|sp|Q4HWE2.3|XRN2_GIBZE RecName: Full=5'-3' exoribonuclease 2
Length = 980
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/801 (45%), Positives = 495/801 (61%), Gaps = 54/801 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ +YP +++ VIE++P+V+ DG IPVDT++PNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTRYPKIISPVIEDQPLVMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPPKS----DSQVFDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +++ G L +S + FDSN ITPGT FM +L+++L
Sbjct: 121 RSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DPGW K+K+I+SDA VPGEGEHKIM++VR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF Q+ + C +CGQ GH A NC G+ K+K GE DEK
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDK 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
V + KP+ +LH+ LREYL E +PN PF DLE VDD+IFMC FVGNDFLPH+P
Sbjct: 301 GVAL--KPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L ++K +GGY+T L R + + + ED IF++R
Sbjct: 359 LEIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNIFKRRKEQED 418
Query: 414 RHAERIKREKAQ-------ARRGDDVEPLA-----QPDSLVPVSRFHGSRLASGPSPSPY 461
R KR K Q R+G P P++ +P+ A G +
Sbjct: 419 RREANFKRRKLQNEVNGRGGRQGGPSHPKKINGHENPENGLPLQ-------AVGAYTGRH 471
Query: 462 QQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE------FK 515
+Q+ + N S P S A++ A ++++ S EN E+ K
Sbjct: 472 EQTLTHDMVVN---RSTAPDANVANKSAASVLKAQLQSQKSLSNPKPENPEQESPSALGK 528
Query: 516 AKLKELLRDKS---DAFNSDNPEE-------DKVKLGEPGWKERYYEEKFNAKTPEEREE 565
K + S DA + P D V+L E G+ +RYYE+KF+ K P++ E
Sbjct: 529 RKASSIEEGNSSVPDAASVSTPSTSAEEGPVDDVRLWEDGYADRYYEKKFH-KDPKDIE- 586
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 625
R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KD+ + NISFE G KP
Sbjct: 587 FRHGVGRAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDIAKMNISFEKGRVSKP 646
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
F QL+ V P+AS HALPE + LM +P S I DFYP DFE+D+NGK+++WQG+A LPFI+
Sbjct: 647 FEQLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFEIDLNGKKFAWQGVALLPFIE 706
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEV 745
RLL V+ L+ ++ RN + D+L H S+Y DE + K++ +
Sbjct: 707 MPRLLAAVQSKYPELSAADSARNEMGRDVLIFSEGH---ESLY--DEVLTKFYSKKQGDS 761
Query: 746 KERLNPELSDGMNGYISPCAG 766
K +LNP+ SDG++G + G
Sbjct: 762 KFKLNPKKSDGLSGRVEKKEG 782
>gi|47214629|emb|CAG01470.1| unnamed protein product [Tetraodon nigroviridis]
Length = 836
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/792 (45%), Positives = 488/792 (61%), Gaps = 57/792 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +EE+ +GV+IPVDT++PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTRPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ A+ E++R+R+E GTEFM L+ L+YYI
Sbjct: 121 ASKEGAELVEEKKRIREE------------------------GTEFMDNLAKCLRYYIAD 156
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW I V LSDA+VPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 157 RLNNDPGWRNITVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIMLG 216
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LCGQ GH +C+G A+ K GE DE D + V ++
Sbjct: 217 LATHEPNFTIIREE-FKPNKPRPCALCGQLGHEIKDCQGTAREKKGEHDEFADSMPVAEQ 275
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 276 EFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 335
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ L RVE +QAVG ED IF+KR + ++
Sbjct: 336 IDRLVNIYKDVVHKTGGYLTENGYVKLERVEMIMQAVGVAEDNIFKKRKE------DEVR 389
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
++ + ++ + + + +F L P Q + + K + +
Sbjct: 390 FKRRMREKKKRMKMEQRGPAYLTTGQFTPHALGGRDQPEAVQNARYQA-YEMRKQSMEQH 448
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+K ++ ++ AA+ NS T P E AK K ++ +S+ ED V+
Sbjct: 449 NK----NAAQSLKAAMRNGGNS-STWPSSGPESRGAKRK------AEDSDSEPEPEDNVR 497
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E GWK+RYY+ KF+ +E + R+ VV Y EGLCWV+ YYY+G SW+W++P+HY
Sbjct: 498 LWEEGWKQRYYKNKFDVDVMDE--DFRRKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHY 555
Query: 601 APFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
APFASD KD+ FE G PFKP QL+GVFP+AS + LPE +R LM+ P+S I DF
Sbjct: 556 APFASDFKDIKGMFSEFEKGTKPFKPLEQLMGVFPAASGNFLPETWRNLMSSPDSSIIDF 615
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+Y+WQG+A LPF+DE RL + + LT EE +RNS+ +D +F+
Sbjct: 616 YPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEEEKRNSLGSDFIFLGK 675
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSPV 777
+H L Y + + + E E+ +L G+ G ++ DP P SP+
Sbjct: 676 AHLL----YDFIQELYRTEATEGTEIPA----DLCHGIQGTLN-LDDDPILPDKTVISPI 726
Query: 778 ASMEDIMGNQVL 789
++ DI N +
Sbjct: 727 PTLRDITQNNSV 738
>gi|327302674|ref|XP_003236029.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
gi|326461371|gb|EGD86824.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
Length = 1034
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/812 (44%), Positives = 491/812 (60%), Gaps = 73/812 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ V+EE+P IDG +IPVD +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVITPGTEFMAVLS 171
+++DA AE+E+ + EF ++ G+K + + ++ +D+NVITPGT FM +L+
Sbjct: 121 SAQDA---KAEDEK-KVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILA 176
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P YDPNTRH +YG
Sbjct: 177 LALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYG 236
Query: 232 LDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
LDADLIML L THE HF +LRE V F + C LCGQ GH+ C GKAK K GEFDE
Sbjct: 237 LDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDE 296
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
K + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMCFFVGNDFLPH
Sbjct: 297 K--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPH 354
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q + ED IF++R +
Sbjct: 355 LPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIFRRRRQ 414
Query: 411 L---------------------HQRHAERIKREKAQARRGDDVEPLAQPDS--------- 440
+ HA + +R A D+ PL P
Sbjct: 415 TEERRNANAKRRQEEDRQRRNNNNDHARKKRRGSRGAEPVPDIPPLVVPGKGELSRAERE 474
Query: 441 ---LVPVSR---FHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGA 494
+ V+R + + + + Q G ++G G + P + +G
Sbjct: 475 LTHAMVVNRGAVYKANMANKSAAAALKAQLLSGGTAEDGAGATNSQDPAPSGMPSSKLGK 534
Query: 495 AIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK-----VKLGEPGWKER 549
++D EN +E ++ P+ED+ V+L E G+ +R
Sbjct: 535 R--------KSDVFENSNTEAEAEEEDEEEEDTVEVPAKPKEDEMPPDTVRLWEDGYADR 586
Query: 550 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 609
YYE+KF + R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D D
Sbjct: 587 YYEQKFGVNPKD--IAFRHKVARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVD 644
Query: 610 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
+ + ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D NS I DFYP DF VD+N
Sbjct: 645 IGKMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLN 704
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT 729
GK+++WQG+A LPFIDE RLL + K H L+EEE RN++ D+L + HPL S+
Sbjct: 705 GKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLLLSEKHPLYESL-- 762
Query: 730 LDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
K++V K +LN +S+G+ G +
Sbjct: 763 ----TANFYSKKQVSSKLKLNMRISEGLGGKV 790
>gi|225560323|gb|EEH08605.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus G186AR]
Length = 1042
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/807 (44%), Positives = 486/807 (60%), Gaps = 66/807 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+ +P P T +++ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E +Q + G L + ++ +DSNVITPGT FM +L+ AL+
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK K GEFDEKG
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 S--PLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ A+ GYLT L R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTEER 418
Query: 415 HAERIKREKAQARR----------------------GDDVEPLAQPDSLVPVSRFHGSRL 452
KR K + R G L P +VP + H SR
Sbjct: 419 KNANAKRRKQEERYREEERSREEERSRKKRRSSPNYGSMENELVPPPLIVP-GKGHISRA 477
Query: 453 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 512
+ S V + + ++ K + G++ A E+S + N
Sbjct: 478 DRELTHSMVVNRGAVYKANMANKSAAAVLKSQLIKGGSSGDAVTAGVEDSVDGT-VNNTS 536
Query: 513 EFKAKLKELLRDKSDAFNSDNPEE-------------DKVKLGEPGWKERYYEEKFNAKT 559
F L + K+DA ++ E D V+L E G+ +RYYE+KF+
Sbjct: 537 PFS-----LGKRKADALETETESETPKKPDDTDELPPDTVRLWEDGYADRYYEQKFHVDP 591
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D DL I F
Sbjct: 592 KDI--EFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLGNMKIEFNK 649
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G PFKPF QL+GV P+AS+HA+PE + LM+DP S I DFYP DF +D+NGK+++WQG+A
Sbjct: 650 GAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEDFPIDLNGKKFAWQGVA 709
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASIYTLDEHCK 735
LPFIDE RLL ++K L+ EE RN+ ++LF+ HP L+A+ Y+ +
Sbjct: 710 LLPFIDEKRLLLAMEKRYPLLSNEEHARNTTGREVLFLSDRHPLYENLTANFYSKKQLAP 769
Query: 736 QLKIKERVEVKERLNPELSDGMNGYIS 762
LK+ RV S+G+ G +
Sbjct: 770 TLKLNMRV----------SEGLGGKVG 786
>gi|121701237|ref|XP_001268883.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
gi|119397026|gb|EAW07457.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
Length = 1043
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/816 (43%), Positives = 491/816 (60%), Gaps = 66/816 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE P ++G +IPVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISSVIEELPYEVNGEEIPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREG-----RKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E R+ ++ ++L + + +DSNVITPGT FM +L+ +L+
Sbjct: 121 SAQEAREADEKKEEFRKMLAKQNGNKADQELHEEVIQKTWDSNVITPGTPFMDILAASLR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGLDAD
Sbjct: 181 YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQPGH A C G+AK K GEFDEK
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESRPRTCNLCGQPGHKAEECRGQAKEKNGEFDEKQKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 SSL--KPFIWLHVSVLREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEER 418
Query: 415 HAERIKR----------EKAQARR-------------------GDDVEPLAQPDSLVPVS 445
KR ++A RR G D+ P P L+
Sbjct: 419 KLANEKRRKQEAKAREEDRASKRRRSSPNYDALESTSGQRSRGGGDLAP-PTPVELITPG 477
Query: 446 RFHGSRLASGPSPSPYQQSECV--GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSF 503
R SR + S V + N + K+ + S A E +S
Sbjct: 478 RGVLSRETRELTHSMVVNRSAVYKANMANKSAAAVLKSKLMKGSQDDENAGADAEEPDSN 537
Query: 504 ETDPQENKEE---------FKAKLKELLRDKSD---------AFNSDNPEEDKVKLGEPG 545
+P + ++ + E++ ++S A D D V+L E G
Sbjct: 538 NGEPAQESQDPAEQTSPSVLGKRNVEVVEEESADAGTPVVPAAAKEDELPPDTVRLWEEG 597
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+ +RYY +KF PE++E R V Y EGL WV+ YY++G SW W++PYHYAPFA+
Sbjct: 598 YADRYYAQKFGV-GPEDKE-FRHKVARAYAEGLAWVLLYYFQGCPSWTWYFPYHYAPFAA 655
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D D+ ISF+ G PF+PF QL+GV P++S+HA+PE + LM++P+S I DFYP DF
Sbjct: 656 DFVDIGDMEISFDKGIPFRPFEQLMGVLPASSNHAIPEVFHDLMSNPSSEIIDFYPEDFA 715
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA 725
VD+NGK+++WQG+ LPFIDE RLL ++K L+E+E RNS+ D+L + +HPL
Sbjct: 716 VDLNGKKFAWQGVILLPFIDERRLLAAMEKKYPLLSEDEKLRNSVGRDVLLISEAHPLYQ 775
Query: 726 SIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
+ K++ K +LN +SDG+ G +
Sbjct: 776 DL------VGNFYSKKQDASKYKLNMRISDGLAGRV 805
>gi|408399376|gb|EKJ78479.1| hypothetical protein FPSE_01288 [Fusarium pseudograminearum CS3096]
Length = 980
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/799 (45%), Positives = 490/799 (61%), Gaps = 50/799 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ +YP +++ VIE++P+V+ DG IPVDT++PNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTRYPKIISPVIEDQPLVMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAPT +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPTDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPPKS----DSQVFDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +++ G L +S + FDSN ITPGT FM +L+++L
Sbjct: 121 RSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DPGW K+K+I+SDA VPGEGEHKIM++VR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF Q+ + C +CGQ GH A NC G+ K+K GE DEK
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDK 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
V + KP+ +LH+ LREYL E +PN PF DLE VDD+IFMC FVGNDFLPH+P
Sbjct: 301 GVAL--KPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L ++K +GGY+T L R + + + ED IF++R
Sbjct: 359 LEIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQVILDGLAQQEDNIFKRRKEQED 418
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL--- 470
R KR K Q P H ++ +P + VG
Sbjct: 419 RREANFKRRKLQNEGNGRGGRQGGPS--------HPKKINGHENPENGLPLQAVGAYTDR 470
Query: 471 -------DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE------FKAK 517
D S P S A++ A ++++ S EN E+ K K
Sbjct: 471 HEQALTHDMVVNRSTAPDANVANKSAASVLKAQLQSQKSLSNPKPENPEQDSPSALGKRK 530
Query: 518 LKELLRDKS---DAFNSDNP----EE---DKVKLGEPGWKERYYEEKFNAKTPEEREETR 567
+ S DA + P EE D V+L E G+ +RYYE+KF+ K P++ E R
Sbjct: 531 ASSIEEGNSSVPDAASVSTPSVPAEEGPVDDVRLWEDGYADRYYEKKFH-KDPKDIE-FR 588
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KD+ + NISFE G KPF
Sbjct: 589 HGVGRAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDIAKMNISFEKGRVSKPFE 648
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+ V P+AS HALPE + LM +P S I DFYP DF++D+NGK+++WQG+A LPFI+
Sbjct: 649 QLMSVLPAASRHALPEVFHDLMLNPESNIIDFYPEDFQIDLNGKKFAWQGVALLPFIEMP 708
Query: 688 RLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE 747
RLL V+ L+ ++ RN + D+L H S+Y DE + K++ + K
Sbjct: 709 RLLAAVQSKYPELSAADSARNEMGRDVLIFSEGH---ESLY--DEVLTKFYSKKQGDSKF 763
Query: 748 RLNPELSDGMNGYISPCAG 766
+LNP+ SDG++G + G
Sbjct: 764 KLNPKKSDGLSGRVEKKEG 782
>gi|115492077|ref|XP_001210666.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
gi|114197526|gb|EAU39226.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
Length = 1022
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/811 (44%), Positives = 490/811 (60%), Gaps = 67/811 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE P ++G ++PVDT++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISSVIEERPYEVNGEEVPVDTTRPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPVNEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLR-----QEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E R Q + + L + + +DSNVITPGT FM +L+ +L+
Sbjct: 121 SAQEAKEADEKKEEFRKLQAKQNGNKADQDLQEEVIQKTWDSNVITPGTPFMDILAASLR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGLDAD
Sbjct: 181 YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRADPEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE +F +LRE V F + C LCGQ GH A C G+AK K+GEFDEK +
Sbjct: 241 LIMLGLATHEPYFRVLREDVFFQESKARTCHLCGQVGHKAEECRGRAKEKSGEFDEKQNG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ KP+ +L++ LREYL E +PN PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 TSL--KPFIWLNVSILREYLAVELHVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ +GGYLT ++ + +Q + ED IF++R ++ +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDFKKAQLILQGLAKQEDAIFRRRRQVEER 418
Query: 415 HAERIKREKAQA----------RRG----DDVEPLAQPD---------------SLVPVS 445
A KR K +A RRG D EP A L+ +
Sbjct: 419 KAANEKRRKQEAQDREERSKRQRRGSPSYDAYEPPANNRSRGGGSGGPAPPSGLELITPA 478
Query: 446 RFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFET 505
R SR QS V R + L S G+ +E+ E
Sbjct: 479 RGELSRQT-----RELTQSMVVNRGAVYRANMANKSAAAVLKSKLMKGSQEDTSEDVEEP 533
Query: 506 DPQENKEEFKAKLKELLRDKSDAFN-------SDNPEEDK--------VKLGEPGWKERY 550
E E+ + L + K+D N S+ P+ +K V+L E G+ +RY
Sbjct: 534 STDEPAEQTSPSV--LGKRKADEPNGGEETPGSETPKPNKDDEMPPDTVRLWEEGYADRY 591
Query: 551 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
YE+KF PE++ E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D D+
Sbjct: 592 YEQKFGV-DPEDK-EFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDI 649
Query: 611 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 670
SFE G PFKPF QL+GV P++S+HA+PE + LM DP+S I DFYP DF VD+NG
Sbjct: 650 ADMIPSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMKDPDSEIIDFYPEDFAVDLNG 709
Query: 671 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
K+++WQG+ LPFIDE RLL+ ++K L++EE RN + D+L + HPL +
Sbjct: 710 KKFAWQGVVLLPFIDEKRLLNAMEKKYPLLSDEERLRNCVGRDVLLISDRHPLYQDL--- 766
Query: 731 DEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
K++ K +LN +S+G+ G +
Sbjct: 767 ---VGNFYSKKQGAPKYKLNMRVSEGLAGKV 794
>gi|145240295|ref|XP_001392794.1| 5'-3' exoribonuclease 2 [Aspergillus niger CBS 513.88]
gi|134077309|emb|CAK45649.1| unnamed protein product [Aspergillus niger]
Length = 1045
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/805 (44%), Positives = 507/805 (62%), Gaps = 69/805 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE P I+G ++PVDT++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEFPQEINGEEVPVDTTRPNPNGDEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSD--------SQVFDSNVITPGTEFMAVLSI 172
++++A ++ ++E R+ E++ K K D + +DSNVITPGT FM +L+
Sbjct: 121 SAQEAREADEKKEEFRKMLEKQNGK---KEDEDMQEHVIQKTWDSNVITPGTPFMDILAA 177
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
AL+Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGL
Sbjct: 178 ALRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNTRHVIYGL 237
Query: 233 DADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML LATHE +F +LRE V F + C LCGQ GH A C+G+AK K G+FDEK
Sbjct: 238 DADLIMLGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEKNGQFDEK 297
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
G + KP+ +L++ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+
Sbjct: 298 GKGTSL--KPFIWLNVSILREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDFLPHL 355
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P+L+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED IF++R +
Sbjct: 356 PSLDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQA 415
Query: 412 HQRHA--ERIKREKAQARR---------GDDVEPLAQPDSLVPVSRFHGSRLASGP---- 456
+R A E+ ++++AQAR + E P++ R G+ A+ P
Sbjct: 416 EERRAANEKRRKQEAQAREEGARKRRKSSPNYEAYDTPEANPTGGRSKGAADAAPPNAVE 475
Query: 457 --SPSPYQQSECVGRLDNGKGTS-GRPHK--VPRLSSGATIGAAIVE-------AENSFE 504
+P+ + + +L + T+ G +K + S+ A + + +++ ++N+ E
Sbjct: 476 LITPARGELTREARQLTHSMVTNRGAVYKANMANKSAAAILKSKLMKGPEAEEPSDNTGE 535
Query: 505 T-----DPQENKEEFKAKLKELLRDKSDAF---------------NSDNPE--EDKVKLG 542
+ +P E K E + L + K+DA +S N E D V+L
Sbjct: 536 SGSEAPEPSEEKTEEQTSPSVLGKRKADAVAEEAATTPTKKPSAGDSQNDELPPDTVRLW 595
Query: 543 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
E G+ +RYYE+KF PE++E R V Y EGL WV+ YY++G SW W+YPYHYAP
Sbjct: 596 EEGYADRYYEQKFGV-DPEDKE-FRHKVARAYAEGLAWVLRYYFQGCPSWTWYYPYHYAP 653
Query: 603 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
FA+D D+ + FE G PFKPF QL+GV P++S+HA+PE + LM+DP+S I DFYP
Sbjct: 654 FAADFVDIGDMELQFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMSDPDSEIIDFYPE 713
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP 722
DF VD+NGK+++WQG+ LPFIDE RLL ++K L+++E RN + D+L + SHP
Sbjct: 714 DFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDEKLRNCVGRDVLLISESHP 773
Query: 723 ----LSASIYTLDEHCKQLKIKERV 743
L A+ Y+ + + I +R+
Sbjct: 774 LYHDLVANFYSKKQGAPKYSINQRI 798
>gi|259016407|sp|Q60SG7.2|XRN2_CAEBR RecName: Full=5'-3' exoribonuclease 2 homolog
Length = 976
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/792 (45%), Positives = 482/792 (60%), Gaps = 33/792 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL +KYP V + E+ +DG ++PVD ++PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDRQRGVDGRRVPVDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP DE+F +F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFMAVLSIALQYY 177
ASK+ A+ AA E R+ EG +P K + FDSN ITPGT FMA L+ AL+YY
Sbjct: 121 ASKEMAEKAASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRYY 180
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
IH R+ NDP W I++ILSDANVPGEGEHKIM Y+R QR P +DPNT HCL G DADLI
Sbjct: 181 IHDRVTNDPAWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLI 240
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML +ATHE +F+I+RE F P Q C LCGQ GH C G A + GDE
Sbjct: 241 MLGIATHEANFNIIRE-EFVPNQPRACELCGQYGHELKECRG-----AENDTDLGDEYCK 294
Query: 298 P---KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P +K + FL I LREYL+ E +PN PF+ +LE +DD++F+CFFVGNDFLPH+P+L
Sbjct: 295 PEQREKNFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVGNDFLPHLPSL 354
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
EIREGAI+ L+ +YK+ + GYLT P L RVE ++ +G ED IF++R + +R
Sbjct: 355 EIREGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQDEER 414
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
E K +KA+ ++ P + S P +P S G
Sbjct: 415 FKENQKNKKARMQQYGRGRGGRGRGRGQPA--YVPSHGILAPMSAPMHHS---GESTRQM 469
Query: 475 GTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
+ R + ++ A + +++ E A+ + + +D
Sbjct: 470 ASDARQAAMQFNATNDANAQAAANLKALLNVKGEQSPAEVAAQESRKRKAEQPIIITDED 529
Query: 535 EE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
EE D ++L E GWKERYY KF+ + + + R V Y EGLCWV+ YYY+G SW
Sbjct: 530 EEPKDDIRLYESGWKERYYRAKFDVGS--DDVDFRHRVAWAYVEGLCWVLRYYYQGCSSW 587
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W++PYHYAPFASD + + +F F PF P QL+ VFP+AS LP ++KLMT+
Sbjct: 588 DWYFPYHYAPFASDFETVGEFKPDFTRPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMTE 647
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
SPI D YP DF +D+NGK+Y+WQG+A LPF+DE RLL+ +K + TLT+EE RN+
Sbjct: 648 DESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKSVYPTLTDEEKYRNTRG 707
Query: 712 ADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS--PCAGDPH 769
+ +F+ +H + + + K + V+ L+P L +G++G IS A P
Sbjct: 708 PNRIFIGRNH----KSFAFFQQVAESKSNDLVD----LDPSLLNGVSGKISYDSTATAPG 759
Query: 770 PPVFRSPVASME 781
P F SPV+ E
Sbjct: 760 LP-FPSPVSHEE 770
>gi|240278750|gb|EER42256.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus H143]
gi|325090340|gb|EGC43650.1| 5'-3' exoribonculease Dhp1 [Ajellomyces capsulatus H88]
Length = 1042
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/788 (44%), Positives = 480/788 (60%), Gaps = 56/788 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+ +P P T +++ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E +Q + G L + ++ +DSNVITPGT FM +L+ AL+
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR+ +DPNTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK K GEFDEKG
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 S--PLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ A+ GYLT L R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTEER 418
Query: 415 HAERIKREKAQARR----------------------GDDVEPLAQPDSLVPVSRFHGSRL 452
KR K + R G L P +VP + H SR
Sbjct: 419 KNANAKRRKEEERYREEERSREEERSRKKRRSSPNYGSMENELVPPPLIVP-GKGHISRA 477
Query: 453 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 512
+ S V + + ++ K + G++ A E+S + N
Sbjct: 478 DRELTHSMLVNRGAVYKANMANKSAAAVLKSQLIKGGSSGDAVTAGVEDSVDGT-VNNTS 536
Query: 513 EFKAKLKELLRDKSDAFNSDNPEE-------------DKVKLGEPGWKERYYEEKFNAKT 559
F L + K+DA ++ E D V+L E G+ +RYYE+KF+
Sbjct: 537 PFS-----LGKRKADALETETESETPKKPDDTDELPPDTVRLWEDGYADRYYEQKFHVDP 591
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D DL I F
Sbjct: 592 KDI--EFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLGNMKIEFNK 649
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G PFKPF QL+GV P+AS+HA+PE + LM+DP S I DFYP DF +D+NGK+++WQG+A
Sbjct: 650 GAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPESEIIDFYPEDFPIDLNGKKFAWQGVA 709
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP----LSASIYTLDEHCK 735
LPFIDE RLL ++K L+ EE RN+ ++LF+ HP L+A+ Y+ +
Sbjct: 710 LLPFIDEKRLLLAMEKRYPLLSNEEHARNTTGREILFLSDRHPLYENLTANFYSKKQLAP 769
Query: 736 QLKIKERV 743
LK+ RV
Sbjct: 770 TLKLNMRV 777
>gi|85078982|ref|XP_956265.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
gi|74630414|sp|Q8WZX5.3|XRN2_NEUCR RecName: Full=5'-3' exoribonuclease 2
gi|18307456|emb|CAD21516.1| related to dna exoribonuclease Dhp1p [Neurospora crassa]
gi|28917321|gb|EAA27029.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
Length = 1072
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/810 (43%), Positives = 477/810 (58%), Gaps = 54/810 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE++P+ + DG IPVD +KPNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRK-----LPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RA+++A + ++++ + +++ K + FDSN ITPGT FM +L+ +L
Sbjct: 121 RAAREAMEKEEDKQKFVELLKKQNGKPQEEEPVEVVVKKAFDSNSITPGTPFMDILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W IKVI+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF + + C +CGQ GH A NC+G+AK K GEFDEK
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEK-- 298
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ VVP KP+ +LH+ LREYL E +P PF+ +LE +DD++FMCFFVGNDFLPH+P
Sbjct: 299 DAVVPLKPFIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L A++K +GGYLT L RV++ + + ED IF++R
Sbjct: 359 LEIRENGIDTLTAIWKDNLPVMGGYLTKDGHADLERVQYIMAGLAKQEDAIFRRRKETED 418
Query: 414 RHAERIKREK----AQARRGDDVEPLAQP--DSLVPVS-RFHGSRLASGPSPSPYQQSEC 466
R KR K A+ RR + Q +S P FH G +P P +
Sbjct: 419 RREAGFKRRKLADEARQRRAQGSRQIRQAAENSGPPAGFSFHKINEFPGKAPQPSITHDM 478
Query: 467 V---GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE---------- 513
V +D + V + + + EN E+ +
Sbjct: 479 VVNRQAVDQANVANKSAASVLKDQIKSMMAQGTSTPENGAESTETPAETAAAAPATEEQA 538
Query: 514 -----FKAKLKELLRDK-----------SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNA 557
+ EL+ D ++ SD D V+L E G+ +RYYE+KF
Sbjct: 539 APPAALGKRKAELIEDAVAGPEASSTEVTEISESDAEPTDSVRLWEEGYADRYYEQKF-- 596
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 617
K + + R V Y EGL WV+ YY++G SW+WFYPYHYAPFA+D DL + I F
Sbjct: 597 KVDRKDIDFRHKVGRAYAEGLAWVLEYYFQGCPSWEWFYPYHYAPFAADFVDLGKMEIKF 656
Query: 618 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 677
E G +PF QL+ V P+AS HA+PE + LM + S I FYP DFE+D+NGK+ +WQG
Sbjct: 657 EKGRISRPFEQLMSVLPAASRHAIPEVFHSLMLEETSEIRHFYPDDFEIDLNGKKMAWQG 716
Query: 678 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH-CKQ 736
+A LPFID RLL ++ H L+ E+ RN+ D L + SHP TL +H Q
Sbjct: 717 VALLPFIDMPRLLAAMETKSHLLSPEDHLRNAPGKDYLLLSDSHP------TLYDHITSQ 770
Query: 737 LKIKERVEVKERLNPELSDGMNGYISPCAG 766
K++ K L+P S G++G + G
Sbjct: 771 FYSKKQGTTKFELDPTKSAGLSGLVEKIDG 800
>gi|346319605|gb|EGX89206.1| 5'-3' exoribonuclease Dhp1 [Cordyceps militaris CM01]
Length = 970
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/804 (44%), Positives = 490/804 (60%), Gaps = 59/804 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE+ PVV+ DG IPVD ++ NPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDRPVVMEDGTAIPVDITRANPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HP+D+PAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPDDKPAPEDEEEMMLEIFKYTDRVLNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTEFMAVLSIAL 174
R++++A D +++ L + +++ G L +S + FD+N ITPGT FM +L+ +L
Sbjct: 121 RSAQEAKDKENDKQELIKLLKQQNGGNLATESTEAIAKKAFDNNSITPGTPFMDILASSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DPGW K+KVI+SDA VPGEGEHKIM++VR QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE V F + C LCGQ GH A NC+G+ K K+GE DEK
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARTCKLCGQRGHDAQNCKGETKGKSGEVDEKDK 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
V++ KP+ +LH+ LREYL E IP PF DLE ++DD+IFMC FVGNDFLPH+P
Sbjct: 301 PVIL--KPFIWLHVSVLREYLAAELAIPELPFRFDLERVIDDWIFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L ++K+ ALGGY+T L R + + + ED IF+KR
Sbjct: 359 LEIREHGIDTLTTIWKQNLPALGGYITKDGHIDLERAQCILDGLAGQEDMIFKKRKEQED 418
Query: 414 RHAERIKREKAQA---------------RRG--DDVEPLA-QPDSLVPVSRFHG------ 449
R KR + Q R G D LA P +P + G
Sbjct: 419 RREANTKRRRLQNNGASGRDSRNDGKSLRSGHEDPSRGLALHPIESMPTAPLRGITHDMI 478
Query: 450 ---SRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKV----PRLSSGATIGAAIVEAENS 502
+ ++ + + S RL G+GTSG + R S A + E+
Sbjct: 479 VNRTSVSDATAANKSAASVLKERLIAGRGTSGHETNLNDTEDRSSQSAPSKRKLSAVESV 538
Query: 503 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 562
++ P E++ ++ N D V+L E G+ +RYY+ KF+ + P +
Sbjct: 539 EDSTPNESQ------------GTTNPANVSEAPADPVRLWEDGYADRYYQLKFH-RDPGD 585
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 622
RK V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KD+ N++FE G
Sbjct: 586 IA-FRKHVAHAYVEGLAWVLQYYFQGCPSWEWYYPYHYAPFAADFKDISGANVAFEKGII 644
Query: 623 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 682
+PF QL+ V P+AS LPE + LMTD +S I DFYP +FEVD+NGK+ +WQG+A LP
Sbjct: 645 SRPFEQLMSVLPAASRDNLPEIFHSLMTDRDSDIIDFYPEEFEVDLNGKKMAWQGVALLP 704
Query: 683 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKER 742
FI+ RLL+ V++ L++E+++RN + D+L + SH SIY DE K +
Sbjct: 705 FIEMDRLLEAVQRRYPLLSDEDSKRNGVGRDVLLLSDSH---ESIY--DEILTNFYSKRQ 759
Query: 743 VEVKERLNPELSDGMNGYISPCAG 766
+ +LNP+ SDG++GY+ G
Sbjct: 760 GSAQFKLNPKTSDGLSGYVEKQEG 783
>gi|296813543|ref|XP_002847109.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
gi|238842365|gb|EEQ32027.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
Length = 1027
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/830 (43%), Positives = 487/830 (58%), Gaps = 107/830 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ V+EE+P IDG +IPVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLP-PKSD--------SQVFDSNVITPGTEFMAVLS 171
+++DA AE+E+ + EF R +K K+D ++ +D+NVITPGT FM +L+
Sbjct: 121 SAQDAK---AEDEK-KVEFARLLKKQKRGKTDVTIAEEVITKTWDTNVITPGTPFMDILA 176
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P YDPNTRH +YG
Sbjct: 177 LALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYG 236
Query: 232 L------------DADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCE 278
L DADLIML L THE HF +LRE V F + C LCGQ GH+ C
Sbjct: 237 LVSDTNIYTSRLDDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACT 296
Query: 279 GKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIF 338
GKAK K GEFDEK + P KP+ +LH+ LREYL E ++P PF DLE +DD++F
Sbjct: 297 GKAKEKQGEFDEK--QKGSPLKPFIWLHVSILREYLAVEMQVPQQPFPFDLERALDDWVF 354
Query: 339 MCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG 398
MCFFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q +
Sbjct: 355 MCFFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLA 414
Query: 399 SYEDRIF---------------------QKRARLHQRHAERIKREKAQARRGDDVEPLAQ 437
ED IF ++R + HA + +R A D+ PL
Sbjct: 415 KQEDAIFRRRRQTEERRNANAKRRQEEDRQRKNNNHEHARKRRRGSHGAEPAPDIPPLVV 474
Query: 438 PDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIV 497
P G + E + +G + + + ++ A +
Sbjct: 475 P----------------GKGELTRAERELTHSMVVNRGAVYKANMANKSAAAALKAQLLS 518
Query: 498 EAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE--------------------D 537
D ++ E + L++ + KSD F + NP+ D
Sbjct: 519 GGTAEDNADSEDVTEPAGSSLRK--KRKSDVFENSNPDTEAEEDTEAVLEKPKEDEMPPD 576
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLR------YTEGLCWVMHYYYEGVCS 591
V+L E G+ +RYYE+KF RKD+ R Y EGL WV+ YY++G S
Sbjct: 577 TVRLWEDGYADRYYEQKFKVD--------RKDIAFRHKVARAYVEGLSWVLLYYFQGCPS 628
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W W+YPYHYAPFA+D D+ ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D
Sbjct: 629 WTWYYPYHYAPFAADFVDIGAMDVQFTKGIPFKPFEQLMGVLPAASNHAIPEVFRDLMSD 688
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
NS I DFYP DF VD+NGK+++WQG+A LPFIDE RLL + K L+EEE RN++
Sbjct: 689 ENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLKAMDKRYPLLSEEEQARNAMG 748
Query: 712 ADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
D+L + HPL S+ K++ K +LN +S+G+ G +
Sbjct: 749 KDVLLLSEKHPLYESL------TANFYSKKQGSAKLKLNMRISEGLGGKV 792
>gi|347837816|emb|CCD52388.1| similar to 5'-3' exoribonuclease 2 [Botryotinia fuckeliana]
Length = 966
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/798 (44%), Positives = 483/798 (60%), Gaps = 56/798 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL ++YP +V+ VIEE+P IDG IP+D PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLTKQYPKIVSPVIEEQPREIDGQIIPIDIRGPNPNGEECDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP P +E+ +F Y DR+ MVRPRKLL +AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++++A + A ++ L + + +G + + +DSN ITPGT FM +L+++L+Y+I
Sbjct: 121 SAQEAKEKAEDKAELLKMLKSQGSHIEETEVKKAWDSNEITPGTPFMDILALSLRYWIAY 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+LN DP W K+KVI+SD+ VPGEGEHKIM +VR QR+ P ++PNTRH +YGLDADLIML
Sbjct: 181 KLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHNPNTRHVMYGLDADLIMLG 240
Query: 241 LATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE V F G+ C LCGQ GH A C+G K K GEFDEK +
Sbjct: 241 LATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPTL-- 298
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 299 KPFIWLHVSVLREYLAAEMYVPSQPFRFDLERALDDWVFMCFFVGNDFLPHLPSLEIRED 358
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ--RHAE 417
IN L+A+++ +GGYLT L R + + + ED IF+KR + + +
Sbjct: 359 GINTLIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRKRRKNEENFQKKR 418
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY-------QQSECVGRL 470
++ E+ RG++ P P ++G + G +P+ E
Sbjct: 419 KLNNERNARGRGNNGGPQDSP--------YNGRQPPGGAAPTGLPLFTPGVANKEAKAMT 470
Query: 471 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD----PQENKEEFKAKLKELLRDKS 526
+ G +K + A AA+ E N D P+ + ++ L + K+
Sbjct: 471 HDMVMNRGAAYKASIANKSAA--AALKEMMNGKSADDNGEPKADDTSAESPATALGKRKA 528
Query: 527 DAFNSDNPEE-----------------------DKVKLGEPGWKERYYEEKFNAKTPEER 563
+ D+ D V+L E G+ +RYYE+KFN + P++
Sbjct: 529 ELIEDDDSSTPGRNTPASGTPGTPTTPGDDLPPDTVRLWEDGYADRYYEQKFN-RDPKDI 587
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 623
E R +V Y EGL WV+ YY++G SW W+YPYHYAPFA+D +L I F+ G F
Sbjct: 588 -EFRHEVGRAYVEGLAWVLLYYFQGCPSWDWYYPYHYAPFAADFANLKDMKIDFQKGRIF 646
Query: 624 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 683
+PF QL+GV P+AS A+PE + LMT+ +S I DFYP DF VD+NGK+++WQG+A LPF
Sbjct: 647 RPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEIIDFYPEDFVVDLNGKKFAWQGVALLPF 706
Query: 684 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERV 743
ID RLLD + K+ TL E+ + RN + D+L V +H +Y DE + K++
Sbjct: 707 IDSERLLDAMAKVYPTLPEDVSARNGLGRDVLLVSEAH---HDLY--DEITSKFYSKKQD 761
Query: 744 EVKERLNPELSDGMNGYI 761
+LNP++S+G+ G I
Sbjct: 762 APHMKLNPKVSEGLTGRI 779
>gi|406861589|gb|EKD14643.1| 5'->3' exoribonculease Dhp1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 988
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/796 (44%), Positives = 473/796 (59%), Gaps = 49/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP ++++VIEE+P IDG +IP+DT PNPNG E+DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSQKYPKIISNVIEEQPREIDGQEIPIDTRGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPAPKDEEEMMLAIFKYTDRVVNMVRPRKLLLIAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++++A + A++ L + + +G + + +DSN ITPGT FM +L+ +L+Y+I
Sbjct: 121 SAQEAQEKEADKAELLKMLKSQGGHIEEPEIKKAWDSNEITPGTPFMDILAASLRYWIAY 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+LN DP W K+KVI+SD+ VPGEGEHKIM ++R QR+ P +DPNTRH +YGLDADLIML
Sbjct: 181 KLNTDPAWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPHHDPNTRHVIYGLDADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L THE HF +LRE VF + + C LCGQ GH A C GKAK K GEFDEK +
Sbjct: 241 LGTHEPHFRVLREDVFAQERGPRLCRLCGQAGHEARECTGKAKVKDGEFDEKASAPAL-- 298
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL E +P+ P+ DLE +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 299 KPFIWLHVSVLREYLAAELYVPDQPYRFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
I+ L+A+++ +GGYLT L R + + + ED IF++R + R
Sbjct: 359 GIDTLIAIWRDNIPHMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRRRKQTEDRREAGA 418
Query: 420 KREKAQA------------------RRGDDVEPLAQPDSL---VPVSRFHGSRLASGPSP 458
KR K + G A P+ L P + A
Sbjct: 419 KRRKLEQDRGGRGGRGGRGGFKDSPSNGRHKPHNAAPEGLPLFAPGASISREATAMTHDM 478
Query: 459 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL 518
+ + + L N + ++ +G + + +A N P + KA++
Sbjct: 479 AVNRGAIYKANLANKSAAAALKSQI----NGKSSIEDVTDAANKQNEPPVSALGKRKAEI 534
Query: 519 KELLRDKSDAFNSDNPE------------EDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
E D S D P+ D V+L + G+ +RYYE+KF A +
Sbjct: 535 LEEEGDSSTTPARDTPQPSTPKKPDDEPPPDTVRLWDEGYADRYYEQKFGADPSD--IAF 592
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D +L ISFE G F+PF
Sbjct: 593 RHKVAKAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFANLSDIKISFEKGRIFRPF 652
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
QL+GV P+AS A+PE + LMTDP S I DFYP DF VD+NGK+++WQG+A LPFID
Sbjct: 653 EQLMGVLPAASRQAIPETFHDLMTDPESEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDS 712
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH-PLSASIYTLDEHCKQLKIKERVEV 745
RLL + K L E A RN + D+L V +H L A I T K++
Sbjct: 713 DRLLSAMAKKYPMLPPEVAARNGVGKDVLLVAEAHESLYADIAT------NFYSKKQGPP 766
Query: 746 KERLNPELSDGMNGYI 761
+LNP S+G+ G +
Sbjct: 767 HFKLNPSTSEGLTGKV 782
>gi|295660622|ref|XP_002790867.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281119|gb|EEH36685.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1053
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/825 (43%), Positives = 493/825 (59%), Gaps = 83/825 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEIDGQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAID----------------- 103
PC HPE +P P+ +E+ +F Y DR+ MVRPRKLL +A+D
Sbjct: 61 PCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDVSLRTITLLSHYDDSVI 120
Query: 104 ----GVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ------ 153
GVAPRAKMNQQRSRRFR++++A + A+E+++ EF + RK K +
Sbjct: 121 SEGNGVAPRAKMNQQRSRRFRSAQEAKE--ADEKKV--EFAKLLRKQNGKKSCEEIVEEV 176
Query: 154 ---VFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMS 210
+DSNVITPGT FM +L+ AL+Y++ +LN DP WEK+K+I+SDA VPGEGEHKIM
Sbjct: 177 IVKTWDSNVITPGTPFMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIME 236
Query: 211 YVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQ 269
++R QR+ P ++PNTRH +YGLDADLIML LATHE HF +LRE V F + C LCGQ
Sbjct: 237 FIRSQRSCPEHNPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQ 296
Query: 270 PGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDL 329
GH+A C+G AK K GEFDEKG + KP+ +LH+ LREYL E +P PF DL
Sbjct: 297 TGHIAEACKGTAKEKNGEFDEKGKGSSL--KPFIWLHVSVLREYLAVEMHVPQQPFPFDL 354
Query: 330 ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRR 389
E +DD++FMCFFVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT L R
Sbjct: 355 ERALDDWVFMCFFVGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVDLNR 414
Query: 390 VEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQ-------------------ARRGD 430
+ +Q + ED IF++R + +R KR K + +
Sbjct: 415 AQLILQGLAKQEDAIFRRRRQTEERKNANAKRRKEEERVREEERSRKRRRSSPTYGTMRN 474
Query: 431 DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGA 490
++ A P +VP + + SR + S + + + ++ K +
Sbjct: 475 ELSLPAPPPLMVP-GKGNISRAERELTHSMVVNRGAIYKANMANKSAAAAIKSQLFKGAS 533
Query: 491 TIGAAI-VEAENSFE--TDPQENKEEFKAKLKELLRDKSDAFNSDNPEE-------DKVK 540
+ G + ++AE+S + TD K K L S P++ D V+
Sbjct: 534 SNGDSTGIDAEDSVDGATDASSPTHLGKRKADALDTGTESETPSIKPQDNDDDLPPDTVR 593
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L E G+ +RYYE+KF + E R V Y EGL WV+ YY++G SW W+YPYHY
Sbjct: 594 LWEEGYADRYYEQKFQVHPKD--IEFRHKVARAYVEGLAWVLLYYFQGCPSWTWYYPYHY 651
Query: 601 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
APFA+D DL + NI F G PFKPF QL+GV P+AS+HA+PE + LM+DPNS I DFY
Sbjct: 652 APFAADFVDLGKMNIEFNRGAPFKPFEQLMGVLPAASNHAIPEVFHDLMSDPNSEIIDFY 711
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLS 720
P +F +D+NGK+++WQG+A LPFIDE RLL ++K H L+ EE RNS+ D+L V
Sbjct: 712 PEEFPIDLNGKKFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEEHARNSMGRDVLLVSDR 771
Query: 721 HP----LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
HP L+A+ Y+ + +LK+ RV S+G+ G +
Sbjct: 772 HPLYDNLTANFYSKKQGLPKLKLNMRV----------SEGLGGKV 806
>gi|328697664|ref|XP_003240404.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Acyrthosiphon pisum]
Length = 958
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/796 (45%), Positives = 489/796 (61%), Gaps = 65/796 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL KYP V+ + IE++ ++G +IP+D++ PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVIVNCIEQKSTDVNGEQIPIDSTSPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP DE+ +F+ IDRLF +VRPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPENKPAPKDEDEMMVAIFECIDRLFRIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ + E R+R+ G LPP K + FDSN ITPGT FM LS L YY+H
Sbjct: 121 ASKETTEKTEELARVRKNLIEAGAILPPEKQKGEHFDSNCITPGTPFMDKLSACLHYYVH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW+ IKVILSDANVPGEGEHKIM +VR QR P +DPNT+H L G DADLIML
Sbjct: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDFVRKQRAQPNHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P Q C +CGQ GH +C+G +R+A F++
Sbjct: 241 GLATHEPNFTIIRE-EFKPNQPKPCDMCGQMGHEIKDCQG-LEREA--FNDGSTIEFSAD 296
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + LREYL+ E +PN PF+ + E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 297 VQFIFVRLNVLREYLERELEMPNLPFKYEFERALDDWVFMCFFVGNDFLPHLPSLEIREN 356
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+++YKK GG+LT +L RV+ + +G ED IF+KR + + A+R
Sbjct: 357 AIDRLVSLYKKTVYKTGGFLTASGDVNLDRVQLIMSDLGMAEDEIFKKRQQTEKMFADRN 416
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
K +K + ++ + + P+ ++ G + A + + S +D
Sbjct: 417 KLKKRREKQDKLMRSKSAPNFVL------GGQYAPSAPNTAFSISNPRQTVD-------- 462
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
++ R S G EN + K K RD +++ + + D+V
Sbjct: 463 --EMRRQSVG------------------NENNQGVKRK-----RDDNESSDEEKETPDEV 497
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+KERYYE KF+ R V L Y GLCWV+ YYY+G SW+W++PYH
Sbjct: 498 RLWEDGFKERYYESKFDVD--RTNSGFRHQVALEYVRGLCWVLQYYYQGCPSWKWYFPYH 555
Query: 600 YAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD ++ + FE G PF+P QL+ VFP+ASS+ +P+ + LM+DP SPI D
Sbjct: 556 YAPFASDFLNISAVSTKFEKGTVPFRPLEQLMSVFPAASSNHVPQPWAILMSDPESPIID 615
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF++D+NGK+++WQG+A LPF++EARL ++ LT EE RRN D L++
Sbjct: 616 FYPVDFKIDLNGKKFAWQGVALLPFVEEARLHKALEPYYDLLTSEERRRNVKGMDRLYIQ 675
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCA--GDPHPPVF 773
+ S Y L K+L + + + E L L DGM G I C G P
Sbjct: 676 QDN----SKYEL---LKELYLNK--DNYENLTSVLIDGMEGKIMLADDCVKIGGSLP--- 723
Query: 774 RSPVASMEDIMGNQVL 789
SPV + + NQV+
Sbjct: 724 -SPVMGLNVVRSNQVI 738
>gi|70995976|ref|XP_752743.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|74630336|sp|Q8TFZ1.4|XRN2_ASPFU RecName: Full=5'-3' exoribonuclease 2
gi|44889966|emb|CAD29606.2| 5'->3'exoribonuclease, putative [Aspergillus fumigatus]
gi|66850378|gb|EAL90705.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|159131498|gb|EDP56611.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus A1163]
Length = 1058
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/822 (43%), Positives = 494/822 (60%), Gaps = 72/822 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE P ++G +IPVD +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEELPYEVNGEEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E R+ ++ G K+ + +V +DSNVITPGT FM +L+ +L+
Sbjct: 121 SAQEAKEADEKKEEFRKMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAASLR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y+I +LN DP WEK+K+I+SDA VPGEGEHKIM ++R QR P +DPNTRH +YGLDAD
Sbjct: 181 YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K GEFDEK
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 SSL--KPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ +GGYLT+ L+R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEER 418
Query: 415 HAERIKREKAQA------------------------------RRGDDVEPLAQPDSLVPV 444
KR K +A R G D P Q + + P
Sbjct: 419 KLANEKRRKQEAKAREEERARKRRRSSPTYEPMDSPVGHRAPRGGGDAAPPNQLELITP- 477
Query: 445 SRFHGSRLASGPSPSPYQQSECVGR--LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS 502
SR SR + S V R + N + K+ + S G E +
Sbjct: 478 SRGELSRQTRELTHSMVVNRGAVYRANMANKSAAAVLKSKLMQGSQNGQNGEEKSEGATT 537
Query: 503 FETDPQENKEE------------FKAKLKELLRDKSDAFNSDNP------EEDK-----V 539
+P +++ + KA L E + D+P +ED+ V
Sbjct: 538 NNDEPSQDQPDQTEQTSPSVLGKRKADLVEEEDTDAGTPGRDSPAVPVAAKEDELPPDTV 597
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+ +RYYE+KF P+++ E R V Y EGL WV+ YY++G SW W+YPYH
Sbjct: 598 RLWEEGYADRYYEQKFGV-DPQDK-EFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYH 655
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFA+D D+ I+F+ G PFKPF QL+GV P++S+HA+P+ + LM+ P+S I DF
Sbjct: 656 YAPFAADFVDIGDMEITFDKGVPFKPFEQLMGVLPASSNHAIPKVFHDLMSSPDSEIIDF 715
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF VD+NGK+++WQG+ LPFIDE RLL ++K LTE+E RNS+ ++L +
Sbjct: 716 YPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNSVGREVLLISE 775
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
+HPL + K++ K +LN +SDG+ G +
Sbjct: 776 AHPLYQDL------VANFYSKKQGVQKYKLNMRISDGLAGKV 811
>gi|326479818|gb|EGE03828.1| hypothetical protein TEQG_02862 [Trichophyton equinum CBS 127.97]
Length = 1035
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/781 (46%), Positives = 486/781 (62%), Gaps = 73/781 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ V+EE+P IDG +IPVD +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEF------EREGRK---LPPKSDSQVFDSNVITPGTEFMAVLS 171
+++DA AE+E+ + EF ++ G+K + + ++ +D+NVITPGT FM +L+
Sbjct: 121 SAQDA---KAEDEK-KVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILA 176
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+AL+Y++ +L+ DPGWEK+KVI+SDA VPGEGEHKIM ++R QR P YDPNTRH +YG
Sbjct: 177 LALRYWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYG 236
Query: 232 LDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
LDADLIML L THE HF +LRE V F + C LCGQ GH+ C GKAK K GEFDE
Sbjct: 237 LDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDE 296
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
K + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMCFFVGNDFLPH
Sbjct: 297 K--QKGNPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPH 354
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q + ED IF++R +
Sbjct: 355 LPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIFRRRRQ 414
Query: 411 LHQRHAERIK-----------------REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLA 453
+R K R+K + RG EP+ LV + SR
Sbjct: 415 TEERRNANAKRRQEEDRQRRNNNNEHARKKRRGSRG--AEPVPDIPPLVIPGKGELSRAE 472
Query: 454 SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSG-ATIGAAIVEAENSFETDPQENKE 512
+ + V + + ++ K LS G A +GA ++S + +K
Sbjct: 473 RELTHAMVVNRGAVYKANMANKSAAAALKAQLLSGGTAEVGADATNTQDSAPSGIPGSK- 531
Query: 513 EFKAKLKELLRDKSDAFNSDN---------------------PEEDK-----VKLGEPGW 546
L + KSDAF + N P+ED+ V+L E G+
Sbjct: 532 --------LGKRKSDAFENSNTEAEAEEEDEEEEETVEVPAKPKEDEMPPDTVRLWEDGY 583
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
+RYYE+KF +P++ R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D
Sbjct: 584 ADRYYEQKFGV-SPKDI-AFRHKVARAYVEGLSWVLLYYFQGCPSWTWYYPYHYAPFAAD 641
Query: 607 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 666
D+ + ++ F G PFKPF QL+GV P+AS+HA+PE +R LM+D NS I DFYP DF V
Sbjct: 642 FVDIGEMDVQFTKGTPFKPFEQLMGVLPAASNHAIPEVFRDLMSDENSEIIDFYPEDFPV 701
Query: 667 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSAS 726
D+NGK+++WQG+A LPFIDE RLL + K H L+EEE RN++ D+L + HPL S
Sbjct: 702 DLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEEQARNAMGKDVLLLSEKHPLYES 761
Query: 727 I 727
+
Sbjct: 762 L 762
>gi|322801233|gb|EFZ21920.1| hypothetical protein SINV_00544 [Solenopsis invicta]
Length = 809
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/764 (46%), Positives = 469/764 (61%), Gaps = 56/764 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + IE++P+ DG IPV+++ PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPISADGTCIPVNSADPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ + E ER+R E +G LPP+ + FDSN ITPGT FMA LS L YYIH
Sbjct: 121 ASKETMEKIDEIERIRSELTLKGASLPPEKPKEAHFDSNCITPGTPFMARLSACLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW I+VILSDANVPGEGEHKIM ++R QR P +DPNT+H L G DADLIML
Sbjct: 181 ERLNNDPGWRNIQVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH +C G + E + G E +
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMRDCTGAEPNQRPEENTFGSECL--- 296
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + LREYL+ E +PN PF+ D E VDD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 297 --FIFVRLNVLREYLERELYMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+A+YKK G +L G ED IF+KR Q
Sbjct: 355 AIDRLVALYKKAVYKTGVHL------------------GDVEDEIFKKR---QQNELAFR 393
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+REK + +R + + + +P +F + L G P +++ + + +
Sbjct: 394 QREKDKKKRNEIISNFKP--TWIPAGQFAPNALGQGIKPK---------TIEDARHEAFK 442
Query: 480 PHKVPR-LSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
+ R ++ A A S T K K E +D SD D+ D+
Sbjct: 443 MRVMGRNYNTNAAQSTNANSALESMLTPENTGNRGQKRKHDECKQDNSD----DDQAHDE 498
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++PY
Sbjct: 499 VRLWEDGFKDRYYESKFDVSP--DNFAFRNNVALQYVRGLCWVLRYYYQGCASWRWYFPY 556
Query: 599 HYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD ++ + FE PF+P QL+GVFP+AS +PE + KLMTDP S I
Sbjct: 557 HYAPFASDFINIGGLSTEFEKNTVPFRPLEQLMGVFPAASRKHVPEPWAKLMTDPKSQII 616
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF++D+NGK+++WQG+A LPF+DE RL + +LTE E +RN D L+V
Sbjct: 617 DFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKKRNVRGDDRLYV 676
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
+ + I L +C + + VE+ +GM G +
Sbjct: 677 GIGNKGYDFIKGLYTNC--IGFDKEVEIS-------VNGMRGTV 711
>gi|347971217|ref|XP_309641.5| AGAP004090-PA [Anopheles gambiae str. PEST]
gi|333466642|gb|EAA05380.5| AGAP004090-PA [Anopheles gambiae str. PEST]
Length = 1042
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/791 (46%), Positives = 472/791 (59%), Gaps = 36/791 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + +E++ V G + + S PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECVEQKAVDDQGNVVYENLSDPNPNRVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+ IDRL +VRPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMIAIFECIDRLMNIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ A+ AAE R+R+E +G LPP K FDSN ITPGT FM LS LQYY+H
Sbjct: 121 ASKETAEKAAEMARIREELAAKGAILPPEKEKGSHFDSNCITPGTPFMDRLSRCLQYYVH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+NN+PGW+ +KVILSDANVPGEGEHKIM Y+R QR P YDPNT H L G DADLIML
Sbjct: 181 DRMNNNPGWKNLKVILSDANVPGEGEHKIMDYIRKQRVQPDYDPNTHHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF+I+RE F P + C +C Q GH +C G + E +K + +
Sbjct: 241 GLATHETHFTIIRE-EFLPNKDRPCDICQQIGHEMKSCTGLQSER--ELADKPPPMPGKE 297
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + L+EYL E +PN PF D E +VDD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 298 TQFIFVRLNVLKEYLQKELDMPNLPFPYDFERVVDDWVFMCFFVGNDFLPHLPSLEIREN 357
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK GYLTD L RVE + +G ED IF++R R ER
Sbjct: 358 AIDRLVTLYKKCVYKTRGYLTDSGSVLLDRVEMIMTDLGFAEDEIFRQRKVSEDRFKERN 417
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
KR + Q R +P+ +++ S+ A P Q V N + +
Sbjct: 418 KRMRMQNER------QRRPN----FEQYNNSQFAPTPLGRGVQPQAVV----NARKEAAH 463
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
L G + NS DP + KA+ + L ++ + P D+V
Sbjct: 464 ---FRMLGQGGNDNERVAAGNNS-ANDPSPRGTKRKAE-EPLAVTVTEDEEKETP--DEV 516
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+K+RYYE KF+ + + R+ V Y GLCWV+ YYY+G SW+W++PYH
Sbjct: 517 RLWEDGFKDRYYESKFDVMP--QNIKFRQTVAWEYVRGLCWVLRYYYQGCASWEWYFPYH 574
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASD K L+ N F+ G PFKP QL+GVFP+AS +P + +LM DP SPI DF
Sbjct: 575 YAPFASDFKHLENVNTHFDRGTPFKPLQQLMGVFPAASRSHVPPAFAELMVDPRSPIIDF 634
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+++WQG+A LPF+DE RL LTEEE RN LFVL
Sbjct: 635 YPIDFRIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPLLTEEERLRNENGDAKLFVL- 693
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD-PHPPVFRSPVA 778
P S TL + EV P D + G++ P + P + SP+
Sbjct: 694 --PGSTGYRTLAGLYGGDDVDYNREV-----PITVDYVEGFVVPTKENVPREGMLPSPIP 746
Query: 779 SMEDIMGNQVL 789
+ + NQVL
Sbjct: 747 GLPAVTENQVL 757
>gi|429849601|gb|ELA24966.1| GTPase-activator protein for Ras-like GTPase, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 3409
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/791 (44%), Positives = 479/791 (60%), Gaps = 45/791 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIEE+PV +D G +IPVDT+ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMDDGSEIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSD-----SQVFDSNVITPGTEFMAVLSIAL 174
R+++DA ++E + + +++ + P+ + FDSN ITPGT FM +L+ +L
Sbjct: 121 RSAQDAQQKEEDKEEVMKLLKQQNGGVIPEETLESMTKKAFDSNSITPGTPFMDILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +L+ DP W ++K+I+SDA VPGEGEHKIMS+VR QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCAYKLSTDPAWARLKIIISDATVPGEGEHKIMSFVRSQRISPDYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF + + C +CGQ GH A NC G+AK K GEFDE+
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKPRVCRICGQKGHEARNCRGEAKEKVGEFDEQ-- 298
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
E KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVGNDFLPH+P
Sbjct: 299 EKAPALKPFIWLHVSILREYLAVELNVPGLPFRFDLERALDDWVFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L A++K +GGY+T L R + + + ED IF++R
Sbjct: 359 LEIRENGIDTLTAIWKDNLPHMGGYVTKDGHVDLARAQLILNGLAKQEDGIFKRRKEQED 418
Query: 414 RHAERIKREKAQARRGD--DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
R KR K Q R + P ++ + F A GP+ + VGR
Sbjct: 419 RREANAKRRKLQEERNQPRNARPKQVDNAAAGLPLFPA---AGGPNGITHDM--VVGRSS 473
Query: 472 NGKGTS--------------GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAK 517
N S G K + G AA V+A ++ TD + + KA
Sbjct: 474 NMNANSANKSAASAIRDQIKGMMSKAEPIPEGDASQAAKVDAPSA-STDAKSILGKRKAD 532
Query: 518 LK-ELLRDKSDAFNSDNPEE------DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 570
+ + L + A P D V++ E G+ +RYYE+KF+ + E R V
Sbjct: 533 GEPDQLSTPTPAAGISTPSAAEEAAMDHVRMWEEGYADRYYEQKFHVDRKDI--EFRHQV 590
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y EGL WV+ YY++G SW+W+YPYHYAPFA+D +LD+ I+FE G +PF QL+
Sbjct: 591 ARAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVELDKMEIAFEKGRISRPFEQLM 650
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
V P+AS HALPE + LM + +S + DFYPTDFE+D+NGK+ +WQG+A LPFI+ RLL
Sbjct: 651 SVLPAASRHALPEVFHDLMLNEDSEVIDFYPTDFEIDLNGKKMAWQGVALLPFIEMPRLL 710
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN 750
V+K L+ + RN + D+L + +H +Y DE K++ E +LN
Sbjct: 711 AAVEKKYPLLSAADRARNGVGRDVLLLSDAH---HDLY--DEITTNFYSKKQGEPTLKLN 765
Query: 751 PELSDGMNGYI 761
P SDG++G I
Sbjct: 766 PRTSDGLSGKI 776
>gi|425770113|gb|EKV08587.1| 5'-3' exoribonuclease 2 [Penicillium digitatum Pd1]
gi|425771660|gb|EKV10097.1| 5'-3' exoribonuclease 2 [Penicillium digitatum PHI26]
Length = 1036
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/801 (44%), Positives = 485/801 (60%), Gaps = 63/801 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ VIEE+ V+DG +IP+D ++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIVSPVIEEQAQVVDGEEIPIDITRPNPNGEEQDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ ++ Y DR+ MVRPRKLL +AIDGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPADEQEMMMEIYKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAVLSIAL 174
A+++A ++ ++E L +Q + G +L + Q +DSNVITPGT FM +L+ +L
Sbjct: 121 AAQEAKENDQKKEELQKMLAQQHVAKTGEQLVREEVVQKTWDSNVITPGTPFMDILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+I +LN DPGWE +K+I+SDA VPGEGEHKIM++VR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNFVRSQRASPNHDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML L THE +F +LRE VF + + C LCGQ GH A C G+ K K+GEFDEK
Sbjct: 241 DLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQTGHKAEECLGRPKEKSGEFDEK-- 298
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ P KP+ +LH+ LREYL E R+P PF DLE +DD++FMCFFVGNDFLPH+P+
Sbjct: 299 QHAAPLKPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPS 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L+IRE I+ L+A+++ A+G YLT L+ + +Q + ED IF +R + +
Sbjct: 359 LDIRENGIDTLIAIWRDNLPAMGSYLTKDGSVELKNAQIILQGLAKQEDAIFARRRQADE 418
Query: 414 RHAERIKREKAQ--ARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
R KR K Q AR + + + ++ SR G P P + GR
Sbjct: 419 RKQANEKRRKEQDAARNKERAQKRRRSSPQRDLTAEDRSR-GGGAEPVPPMELITPGRGH 477
Query: 472 NGKGTSGRPHK-------VPRLSSGATIGAAIVEA------ENSFETDP-QENKEEFKAK 517
K T H V R + AA++++ +N+ +++ N E+ +
Sbjct: 478 LNKETRELTHSMVINRGAVYRANMENKSAAAVLKSKLMKVNQNARDSETLATNGEDVSTE 537
Query: 518 LKE------LLRDKSDAFNSDNPE-------------------------EDKVKLGEPGW 546
L E L + K+D D E ED VKL EPG+
Sbjct: 538 LPEQSSPGVLGKRKADVAEQDVTEAGTPGRDSPLANLAVAEKPKQDEAPEDTVKLWEPGY 597
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
+RYYE+KF + E R V Y GLCWV+ YY++G SW W+YP HYAPFA+D
Sbjct: 598 ADRYYEQKFGVDPKD--LEFRHQVAREYAIGLCWVLRYYFQGCPSWTWYYPRHYAPFAAD 655
Query: 607 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 666
D+ ++ FE G FKPF QL+GV P+AS+HALP+ + LM +P+S I DFYP DF +
Sbjct: 656 FVDIADMDVQFEKGTIFKPFEQLMGVLPAASNHALPKVFHPLMENPDSEIIDFYPEDFPL 715
Query: 667 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP---- 722
D+NGK+++WQG+ LPFIDE RLL+ + K+ LTE+E RNS ++L + +P
Sbjct: 716 DLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNSHGQEVLLLSDRNPLYQD 775
Query: 723 LSASIYTLDEHCKQLKIKERV 743
L A+ Y+ Q +KE V
Sbjct: 776 LVANFYSKKPGPAQYPLKEDV 796
>gi|357471609|ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 866
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/787 (45%), Positives = 463/787 (58%), Gaps = 129/787 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWL KYP D+ N +EYDNLYLDMN IIH
Sbjct: 1 MGVPSFYRWLLNKYPKAFEDI----------------NPNTNTTNVEYDNLYLDMNSIIH 44
Query: 61 PCFHPEDR-----PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
PCFHP D PTTF EVF MF+YIDRL + +PRKLLYMAIDGVAPRAKMNQQR
Sbjct: 45 PCFHPNDDDNNNGTPPTTFVEVFANMFEYIDRLVTIAKPRKLLYMAIDGVAPRAKMNQQR 104
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
+RRFR KD EEERLR+EFE EG+++ PK + +V DSN+ITPGT+FM +S AL+
Sbjct: 105 TRRFRNVKDDEMREVEEERLRKEFEMEGKQVLPKQECEVSDSNIITPGTDFMHQISNALK 164
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YI ++++DP W+ I VILSDANVPGEGEHK+MS++R QR LP YDPNT HCLYG DAD
Sbjct: 165 SYISSKISSDPLWKGIMVILSDANVPGEGEHKVMSFIRKQRGLPDYDPNTVHCLYGSDAD 224
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML L+ HE HFSILREV+ P + E
Sbjct: 225 LIMLGLSCHEPHFSILREVILDPPDR-------------------------------YEK 253
Query: 296 VVPKKPYQF--LHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDFLPHM 351
+ P P +F LHIW LREYL+ E +I +PP F DLE IVDDFIF+CFF GNDFLPH+
Sbjct: 254 LPPNAPMRFKLLHIWLLREYLEIEMKIEDPPKNFVFDLERIVDDFIFICFFSGNDFLPHL 313
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTD--------GSKPSLRRVEHFIQAVGSYEDR 403
P+L I E AI+LLM VYKKEF +GGYL D G+ L RVE F+ VG+YE++
Sbjct: 314 PSLYIHEDAIDLLMTVYKKEFSKIGGYLVDINKIGEKHGAYVKLSRVEKFVLMVGTYEEK 373
Query: 404 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 463
IF KR + + R+ + +++ E L D +
Sbjct: 374 IFSKRTAIRDKKLRRLISDNENSKQ----EELNSHDCM---------------------- 407
Query: 464 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ------ENKEEFKAK 517
DN + + I +AE S PQ +N ++ K K
Sbjct: 408 -----DFDN--------------ENSSNCALRIKKAEASDNVCPQSDEEILKNTKDLKEK 448
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 577
LK+ ++DK D F S + DK+KLG G+KERYY+EKF+ + E RK++V +YTEG
Sbjct: 449 LKKCIKDKGDLFKSGDFLTDKIKLGNVGFKERYYKEKFSVEGSTNIELKRKEIVQKYTEG 508
Query: 578 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSAS 637
L WV+ YY+ GV SW WFYPYHY PF SDLK + Q ++FE G PF PF+QLL V P S
Sbjct: 509 LLWVLQYYFSGVASWTWFYPYHYGPFVSDLKGMAQVRVNFEKGVPFLPFDQLLSVLPQKS 568
Query: 638 SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 697
++ALP+ Y +LM D S I D Y DFE+D+ GKR+ WQG+ KLP++DE RLL E ++++
Sbjct: 569 AYALPKAYAQLMLDEQSKIFDLYSQDFEIDIEGKRFMWQGVCKLPYMDEKRLLTETRELK 628
Query: 698 HTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGM 757
+ L+E EA+RNS+ D L V + L+ I +L + +L+ +SDG+
Sbjct: 629 NELSESEAKRNSVEVDRLLVSGTTKLAEKICSLKLN--------------KLDTSISDGI 674
Query: 758 NGYISPC 764
G IS C
Sbjct: 675 GGIISLC 681
>gi|449673057|ref|XP_002169407.2| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like [Hydra
magnipapillata]
Length = 999
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/765 (46%), Positives = 473/765 (61%), Gaps = 43/765 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL++KYPL+V +EE+ + VK+PVDTS PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPLIVVHCVEEKAKECNDVKVPVDTSLPNPNDYEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP E+ +F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPENKPAPKNETEMMLNIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDA + E ERL + R + + N GTEFM L++ L+YYI
Sbjct: 121 AAKDARERERERERLLDDRFYXNRYV---------NKNFFKXGTEFMDRLAVCLRYYIAH 171
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RL NDPGW+ IKVILSDAN PGEGEHKIM ++R QR P +DPNT+HCL G DADLIML
Sbjct: 172 RLTNDPGWKNIKVILSDANTPGEGEHKIMDFIRKQRAQPDHDPNTKHCLNGADADLIMLG 231
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHF+ILRE F P Q+ C +CGQ GH +CEG K G + +V
Sbjct: 232 LATHEVHFTILRE-EFKPNQKRPCEICGQIGHEKTDCEGLPKENLGS--NCVETPIVQDV 288
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E ++ PF + E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 289 EFIFIRLHVLREYLERELKMEGLPF-YNFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 347
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK+ LGGYL D +L+R + +Q VG ED IF+KR Q+ E +K
Sbjct: 348 IDRLVNIYKRCLPQLGGYLGDSGIVNLKRAQRILQEVGDVEDEIFRKR----QQFEENMK 403
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
K Q + + + DS R +G+ L G + SP+ ++ S
Sbjct: 404 ARKKQNDERNKRQKMEGCDSPFWSPRMNGTPL--GANHSPFMRT-----------PSAFN 450
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
P + + + + + + N+ Q K D + SD+ D ++
Sbjct: 451 EVSPNMKAASDLRQQLTPSTNNSSNSIQATPTS--TSRKRHSEDNVEKNESDDEPVDNIR 508
Query: 541 LGEPGWKERYYEEKFNA---KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
L E GWKERYY KF+ K P ++ RK Y GLCWV+ YYY+G CSW WFYP
Sbjct: 509 LWEEGWKERYYLHKFSVSKEKDPVYFQKFRKHTANEYVIGLCWVLRYYYQGCCSWNWFYP 568
Query: 598 YHYAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
+HYAPFASD D++ ++ FE G PFKP QL+ VFP+AS LP +R LM+ P+SPI
Sbjct: 569 FHYAPFASDFGDIEDLDVKFEKGTVPFKPLEQLMSVFPAASGKFLPPTWRSLMSSPDSPI 628
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYPTDF++D+NGK+++WQG+A LPF+DE RL + + + LTE+E RR+ ++LF
Sbjct: 629 IDFYPTDFKIDLNGKKFAWQGVALLPFVDEKRLHRTLVSVYNDLTEDEIRRSRRDDEVLF 688
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
V ++PL + L E LK K+ + +LS G+ G +
Sbjct: 689 VGKANPLFDYLIGLHE-SGMLKEKQNIVT------DLSLGVRGTV 726
>gi|340992664|gb|EGS23219.1| hypothetical protein CTHT_0008830 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1066
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/801 (45%), Positives = 491/801 (61%), Gaps = 44/801 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ V+EE P+V+ DG +IPVD ++PNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEERPIVMPDGTEIPVDATRPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDKPAPKDEEEMMIEIFKYTDRIVKMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEER----LRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIAL 174
RA+++A + E+++ LR+E ++ P ++ + FDSN ITPGT FM +L+ +L
Sbjct: 121 RAAQEAKEKEEEKKQLLKMLRKEKGSNMQEEPLETVVKKAFDSNSITPGTPFMDILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W K+KVI+SDA VPGEGEHKIM ++R QR+ P ++PNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWAKLKVIISDATVPGEGEHKIMEFIRSQRSSPEHNPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE V F + C LCGQ GH +C+G+AK+K GEFDEK
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEAKARLCKLCGQKGHDERSCKGEAKQKQGEFDEK-- 298
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ P KP+ +LH+ LREYL E +PN PF DLE +DD++F+CFFVGNDFLPH+P
Sbjct: 299 DHAQPLKPFIWLHVSILREYLAAELEVPNLPFRWDLERAIDDWVFLCFFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L A++K +GGYLT L R ++ + + ED IF++R + +
Sbjct: 359 LEIRENGIDTLTAIWKDNLPIMGGYLTKDGHVDLERAQYILNGLAKQEDAIFRRRREVEE 418
Query: 414 RHAERIKREK-----AQARRGDDVEPLAQ-----PDSLVPVSRFHGSRLASGPSPSPYQQ 463
R KR K A A+ D P++ P+ + + P P+
Sbjct: 419 RREANAKRRKLNQQGAHAKGAADSHAGKSGRKHVPEAAGPLPGMALFPITNPPPPAITHD 478
Query: 464 SECVGR------LDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSFETDPQENKEEFKA 516
GR L N S ++ ++ A A E + S +
Sbjct: 479 MVMKGRSVDQANLANKSAASVLKSQIQSMMAQKAATNANGAEKDVSADGTTTAPASALGK 538
Query: 517 KLKELLRDK----------SDAFNSDNPEE-DKVKLGEPGWKERYYEEKFNAKTPEEREE 565
+ EL+ + +D SDN D V+L E G+ +RYYE+KF K + E
Sbjct: 539 RKAELIEEDAATNTDTDSVTDGTGSDNEGPVDTVRLWEEGYADRYYEQKF--KVDPKDIE 596
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 625
R V Y EGL WV+ YYY+G SW+WFYPYHYAPFA+D DL + I FE G +P
Sbjct: 597 FRHKVGRAYAEGLAWVLQYYYQGCPSWEWFYPYHYAPFAADFVDLAKMEIKFEKGRISRP 656
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
F QL+ V P+AS HA+PE Y LMTDPNSPI DFYP +FE+D+NGK+ +WQG+A LPFI+
Sbjct: 657 FEQLMSVLPAASRHAIPEVYHDLMTDPNSPIIDFYPEEFEIDLNGKKMAWQGVALLPFIE 716
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEV 745
RLL +K+ EH L+EE+ RN D+L + +HP +Y ++ K++
Sbjct: 717 MPRLLAAMKEREHLLSEEDRARNEPGFDVLLISDAHP---GLY--EDITSHFYSKKQGAP 771
Query: 746 KERLNPELSDGMNGYISPCAG 766
K +LNP SDG+ G + G
Sbjct: 772 KFKLNPRRSDGLAGKVEKIEG 792
>gi|212531981|ref|XP_002146147.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
gi|210071511|gb|EEA25600.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
Length = 1042
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/805 (42%), Positives = 484/805 (60%), Gaps = 66/805 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE+P ++G IPVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEVIPVDTTKPNPNGEETDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFERE--GRKLPPKSD------SQVFDSNVITPGTEFMAVLSI 172
++++A ++ ++E ++ ++ + + P D + +DSNVITPGT FM +LS
Sbjct: 121 SAQEARENDQKKEEFQKLLVKQNAAKGIDPDKDIKEQVIQKTWDSNVITPGTPFMDILSA 180
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
+L+Y+I +LN DP WEK+K+I+SDA VPGEGEHK+M+++R QR P +DPNTRH LYGL
Sbjct: 181 SLRYWISYKLNTDPAWEKMKIIISDATVPGEGEHKVMNFIRSQRQDPSHDPNTRHVLYGL 240
Query: 233 DADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML LATHE HF +LRE V F + C LCGQPGH A C G+AK K GEFDEK
Sbjct: 241 DADLIMLGLATHEPHFRVLREDVFFQESRPRTCRLCGQPGHKAEECRGEAKEKNGEFDEK 300
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
+ P KP+ +L++ LREYL E ++P F DLE +DD++FMCFFVGNDFLPH+
Sbjct: 301 --QKAAPLKPFIWLNVSVLREYLAVELQVPQQRFPFDLERALDDWVFMCFFVGNDFLPHL 358
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P+L+I+E AI+LL++++++ + Y+T + + + +G ED IF++R +
Sbjct: 359 PSLDIKENAIDLLISIWRENIPLMDDYVTKDGIVNFNHAQLILNGLGKQEDGIFRRRRQA 418
Query: 412 HQRHA--ERIKREKAQARRGDDVEP--LAQPD---------------------------- 439
+R A E+ ++E+ +AR + + + PD
Sbjct: 419 EERKAANEQRRKEEEKARNAERSQKRRRSSPDYTAGEAGLSAPPAKGRKSGEGFIASTEV 478
Query: 440 SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 499
+L+ SR H + + S + + + ++ K L A
Sbjct: 479 TLITPSRGHLDKETRQLTHSMVVNRSAIYKANEANKSAAAALKSQLLKGKVPTNAETETT 538
Query: 500 ENSFETDPQENKEEFKAKL-KELLRDKSDAFN----------------SDNPEEDKVKLG 542
+ + +E+ E + L K + D +DA N SD D V+L
Sbjct: 539 NSEIPSGEEESLETSPSVLGKRKVEDLTDADNGTPGRDSPVAAGPAKPSDELPPDTVRLW 598
Query: 543 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
E G+ ERYYE+KF+ E R V Y EGL WV+ YY +G SW W+YPYHYAP
Sbjct: 599 ESGYTERYYEQKFHVDP--SNVEFRYQVARSYAEGLQWVLLYYMQGCPSWTWYYPYHYAP 656
Query: 603 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
FA+D D+ SFE G PF+PF QL+GV P++S+HA+PE + LM+DPNS I DFYP
Sbjct: 657 FAADFVDIGSMKPSFEKGKPFRPFEQLMGVLPASSNHAIPEIFHDLMSDPNSEIIDFYPE 716
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP 722
DF VD+NGK+++WQG+ LPFIDE RLL ++K L+ +E RN++ D+L + HP
Sbjct: 717 DFPVDLNGKKFAWQGVVLLPFIDETRLLAAMEKKYPLLSADEHARNTVGTDVLLISDQHP 776
Query: 723 ----LSASIYTLDEHCKQLKIKERV 743
L+A+ Y+ + + + RV
Sbjct: 777 LYQELAANFYSKKQSTSKFALDMRV 801
>gi|413924952|gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]
Length = 893
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/807 (43%), Positives = 479/807 (59%), Gaps = 75/807 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPV---DTSKPNPNGLEYDNLYLDMNG 57
MGVP+F++WL KYP +V E++ G P D PNG+ Y NLYLDMN
Sbjct: 1 MGVPSFFKWLVGKYPNIVVPAKEDDGGAGAGASSPSSPWDEPAAGPNGV-YHNLYLDMNA 59
Query: 58 IIHPCFHPEDRPAP-TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
IIHPCFHPED P TTFDEVF MF+YIDRLF +VRP KLLY+A+DGVAPRAKMNQQRS
Sbjct: 60 IIHPCFHPEDEVCPPTTFDEVFAAMFEYIDRLFRIVRPTKLLYLAVDGVAPRAKMNQQRS 119
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLP--PKSDSQVFDSNVITPGTEFMAVLSIAL 174
RRF+A+K+A D+ EE+ LR++F EGR++ P+ +V D N+ITPGTEFM LS AL
Sbjct: 120 RRFKAAKEAKDAELEEKLLREKFRAEGREVRARPRETHEVSDPNIITPGTEFMEKLSKAL 179
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+YY+ RLN+DPGW+ IKVILSD+NVPGEGEHK+MS++R QR+L YDPNT HCLYGLDA
Sbjct: 180 EYYVRSRLNSDPGWKGIKVILSDSNVPGEGEHKVMSFIRGQRSLASYDPNTMHCLYGLDA 239
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLIMLALA+HE+HFSILRE Q +KC E +++ G F + +
Sbjct: 240 DLIMLALASHELHFSILREDGSRQSQPEKCISLSNE---MLKTEDSSRKCRGWFPQVIE- 295
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
PKKPYQF++IW LREYL+ + +IPNP + D+E ++DDFIF+CF GNDF+P +P++
Sbjct: 296 -TTPKKPYQFVNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLTGNDFIPRIPSV 354
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSK--------PSLRRVEHFIQAVGSYEDRIFQ 406
EI EGAI+LL+ YK+ F +GGY+ K + R+E F + E++IF
Sbjct: 355 EIHEGAIDLLLEAYKQTFNKMGGYIVSTEKLKDKHAAYLKVSRLEKFFHELSLCEEKIFL 414
Query: 407 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 466
KR L + + R+ A+ + + + + + + ++ ++ S S Y Q
Sbjct: 415 KRYDLRESLQRKFLRQAAEECKETNYDTMEENTDGLNLT---AKSFSTNCSISTYSQD-- 469
Query: 467 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 526
E+D + N E + LK+ LR+K
Sbjct: 470 -------------------------------------ESDVKANTLELRRNLKDALRNKQ 492
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D S + + D ++LG GWK RYY EKF + E + + D+V RY EGLCWV+ YY+
Sbjct: 493 DLIKSGSCKHDMIRLGLAGWKSRYYREKFGVEKLSEVGKLKNDMVQRYMEGLCWVLQYYF 552
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
V SW W+YPY++APFASD K L QF I F P KPF+QL+ V P SS ALP+ YR
Sbjct: 553 TDVPSWSWYYPYYHAPFASDFKGLSQFKICFTTDKPLKPFDQLMAVLPKESSCALPKCYR 612
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
+LM + S + FYP+D ++D +GKR+ WQGIA LPFIDE L+ K +E L E
Sbjct: 613 ELMENEESLVQKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLVSATKTVEGKLAVHEIN 672
Query: 707 RNSIMADMLFVLLSHPL--SASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC 764
RN++ + +F+ S+ + S ++ C K+ L+P S+ + G++SP
Sbjct: 673 RNAVRQEKIFMRNSNTTVPNGSAFSKAFDCSSKKL--------WLDPSTSE-LGGWLSPV 723
Query: 765 AG-DPHPPVFRSPVA-SMEDIMGNQVL 789
D F S V + DI +Q +
Sbjct: 724 DDKDTSSGFFHSSVMRDLPDIRNDQTI 750
>gi|355563402|gb|EHH19964.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 926
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/797 (45%), Positives = 480/797 (60%), Gaps = 78/797 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTA------------------------QPNHDPNTHHCLCGADADLIMLG 216
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 217 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 275
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 276 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 335
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 336 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 395
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 396 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 447
Query: 476 TSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
S P+ S + IG +AE+S +S+
Sbjct: 448 PSISPNTSFTSDGSPSPIGGIKRKAEDS---------------------------DSEPE 480
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W
Sbjct: 481 PEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKW 538
Query: 595 FYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+
Sbjct: 539 YYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPD 598
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D
Sbjct: 599 SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGD 658
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PV 772
+LFV HPL I L Q E V+V PEL G+ G S P +
Sbjct: 659 VLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQI 710
Query: 773 FRSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 711 VCSPVPMLRDLTQNTVV 727
>gi|346979187|gb|EGY22639.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1013
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/825 (43%), Positives = 484/825 (58%), Gaps = 93/825 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ V+E++P+ + DG IPVDT+ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPPKS----DSQVFDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +++ G LPP++ + + FDSN ITPGT FM L+ +L
Sbjct: 121 RSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W ++K+I+SDA VPGEGEHKIM+YVR QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF + K C +CGQ GH A C+G+AK K GE+DE+
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYDEQ-- 298
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ V KP+ +LH+ REYL E +P+ PF DLE +DD++FMC FVGNDFLPH+P
Sbjct: 299 DKAVDLKPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L ++K+ +GGY+T L+RV+ + + ED IF++R
Sbjct: 359 LEIRENGIDALTTIWKENLPRMGGYVTKDGHIDLKRVQLIMDGLAKQEDAIFRRRKEQED 418
Query: 414 RHAERIKREKAQ------------ARRGDDVEPLAQPDS---LVPVSRFHGSRLASGPSP 458
R KR K Q + RG PL S L PVS F + P
Sbjct: 419 RREANAKRRKLQDERSGRGGRTDASGRGRGKPPLDNASSGLALFPVSGFPNA------DP 472
Query: 459 SPYQQSECVGRL--------------------------DNGKGTSGRPHKVPRLSS---- 488
S VGR GK T+G P + +
Sbjct: 473 SAVTHDMVVGRSSNANINANAANKSAANVIRERIQASGTQGKSTNGDATIHPNVEAPAVP 532
Query: 489 --GATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGW 546
GA +++V+ + +P + L + ++ D V++ E G+
Sbjct: 533 EEGAAAASSVVKRKADVLDEPSQ------------LTPNTGPSAAEEAAIDHVRMWEEGY 580
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLR------YTEGLCWVMHYYYEGVCSWQWFYPYHY 600
+RYYE+KF+ R DV R Y EGLCWV+ YYY+G SW W+YPYHY
Sbjct: 581 ADRYYEQKFHVD--------RNDVAFRHKVAQAYVEGLCWVLLYYYQGCPSWDWYYPYHY 632
Query: 601 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
APFA+D DLD+ ISFE G KPF QL+ V P+AS ALPE + LM + +S + DFY
Sbjct: 633 APFAADFADLDKIEISFEKGRISKPFEQLMSVMPAASRRALPEVFHDLMLNEDSEVIDFY 692
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLS 720
P +FE+D+NGK+++WQG+A LPFID RLL V+K L+ E+A RN I D+L + +
Sbjct: 693 PQEFEIDLNGKKFAWQGVALLPFIDMPRLLAAVEKKYPLLSPEDAARNGIGRDVLLLSDA 752
Query: 721 HPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA 765
H +Y ++ K++ LNP SDGM G + A
Sbjct: 753 H---HELY--EDITSHFYSKKQGAPTFGLNPRTSDGMTGQVEKIA 792
>gi|400592939|gb|EJP60965.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 968
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/792 (44%), Positives = 481/792 (60%), Gaps = 35/792 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ V+E+ P+V+D G +IPVD ++ NPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDRPIVMDDGTEIPVDITRANPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCAHPEDKPAPKDEEEMMLEIFKYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPPKSDSQV----FDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +++ G L +S V FD+N ITPGT FM +L+ +L
Sbjct: 121 RSAQEAKEKENDKQELIKLLKQQNGGSLTAESTESVTKKAFDNNSITPGTPFMDILASSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DPGW K+KVI+SDA VPGEGEHKIM++VR QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPGWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE V F + C LCGQ GH A NC+G+ K EFD K +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARACKLCGQKGHDAQNCKGETKEPTEEFDAKNN 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ + KP+ +LH+ LREYL E IP PF DLE ++DD+IFMC FVGNDFLPH+P
Sbjct: 301 ALTL--KPFIWLHVSVLREYLAAELAIPELPFRFDLERVIDDWIFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L ++K+ ALGGY+T L R + + + ED IF+KR
Sbjct: 359 LEIREHGIDTLTTIWKRNLPALGGYITKDGHIDLERAQCILDGLAGQEDMIFKKRREQED 418
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS-PYQQSECVGRLDN 472
R KR + Q + + L LA P S P + +
Sbjct: 419 RREASAKRRRLQNNGATGRDNRSDGKGLKSGHEDPSRGLALHPIGSMPIAPLKAITHDMT 478
Query: 473 GKGTSGRPHKVPRLSSGATI--------GAAIVEAENSFETDPQENKEEFKAKLK----- 519
T V S+ + + GA EA + D + K KL
Sbjct: 479 VNRTGAADANVANKSAASVLKERLKAGRGALSPEANSKDTKDTPSHSVPVKRKLSAVEAF 538
Query: 520 -ELLRDKSDAFNS--DNPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
E + + N+ D PE D V+L E G+ +RYY+ KF+ + P + R V Y
Sbjct: 539 AESTSNDAQGTNTPGDKPETPADPVRLWEDGYADRYYQLKFH-RDPGDI-SFRTHVAHAY 596
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
EGL WV+ YY++G SW+W+YPYHYAPFA+D KD+ Q N++FE G +PF QL+ V P
Sbjct: 597 VEGLAWVLQYYFQGCPSWEWYYPYHYAPFAADFKDISQANVTFEKGTVSRPFEQLMSVLP 656
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
+AS LPE + LMTD +S I DFYP +FEVD+NGK+ +WQG+A LPFI+ RLL V+
Sbjct: 657 AASRDNLPEVFHSLMTDQDSLIIDFYPEEFEVDLNGKKMAWQGVALLPFIEMDRLLAAVQ 716
Query: 695 KIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELS 754
K L++E+ +RN + D+L + SH SIY DE K++ + RLNP+ S
Sbjct: 717 KRYPLLSDEDRKRNGVGRDVLLLSDSH---ESIY--DEILTNFYSKKQGSTQFRLNPKTS 771
Query: 755 DGMNGYISPCAG 766
DG++GY+ G
Sbjct: 772 DGLSGYVEKQEG 783
>gi|242774442|ref|XP_002478441.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
gi|218722060|gb|EED21478.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
Length = 1042
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/823 (43%), Positives = 492/823 (59%), Gaps = 72/823 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE+P ++G IPVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEVIPVDTTKPNPNGEETDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFERE--GRKLPPKSD------SQVFDSNVITPGTEFMAVLSI 172
++++A ++ ++E ++ R+ + + P ++ + +DSNVITPGT FM +LS
Sbjct: 121 SAQEARENDQKKEEFQKLLARQNAAKGIDPDNNLEEQVIKKTWDSNVITPGTPFMDILSA 180
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
+L+Y+I +LN DP WEK+K+I+SDA VPGEGEHK+M+++R QR P +DPNTRH LYGL
Sbjct: 181 SLRYWISYKLNTDPAWEKLKIIISDATVPGEGEHKVMNFIRSQRQDPSHDPNTRHVLYGL 240
Query: 233 DADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K GEFDEK
Sbjct: 241 DADLIMLGLATHEPHFRVLREDVFFQESKPRTCRLCGQTGHKAEECRGQAKEKNGEFDEK 300
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
V+ KP+ +L++ LREYL E ++P F DLE +DD++FMCFFVGNDFLPH+
Sbjct: 301 QKAAVL--KPFIWLNVSVLREYLAIELQVPQQRFPFDLERALDDWVFMCFFVGNDFLPHL 358
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P+L+I+E AI+LL++++++ + Y+T + + + + +G E+ IF++R +
Sbjct: 359 PSLDIKENAIDLLISIWRENIPLMDDYVTKDGIVNFKHAQLILTGLGKQEEAIFRRRRQA 418
Query: 412 HQRHAERIKR----------EKAQARRGDDVEPLA-QPDSLVPVSR-------FHGSRLA 453
+R A +R E++Q RR + A +P P S+ F S
Sbjct: 419 EERKAANEQRRKEEEKARNAERSQKRRRSSPDYTAGEPTIAAPPSKARKSGEGFIASTEV 478
Query: 454 SGPSPS---------PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIV--EAENS 502
+ +PS S V R K L S G V EAE++
Sbjct: 479 TLITPSRGHLDKETRQLTHSMVVNRSAIYKANEANKSAAAALKSQLLKGKLAVNDEAESA 538
Query: 503 FETDP------QENKEEFKAKL--KELLRDKSDAFN----------------SDNPEEDK 538
P Q+ + + K + D +DA N +D D
Sbjct: 539 NSDGPSGEDTAQDESQGISPSVLGKRKVEDLADADNGTPGRDSPVPAGQSKPTDEMPPDT 598
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L EPG+ ERYYE+KF+ E R V Y EGL WV+ YY +G SW W+YPY
Sbjct: 599 VRLWEPGYTERYYEQKFHVDP--SNVEFRHQVARSYAEGLQWVLLYYMQGCPSWTWYYPY 656
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFASD D+ +F G PFKPF QL+GV P++S+HA+PE + LM+DPNS I D
Sbjct: 657 HYAPFASDFVDIGDMKPNFVKGKPFKPFEQLMGVLPASSNHAIPEIFHDLMSDPNSEIID 716
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+ +E RN++ +D+L +
Sbjct: 717 FYPEDFPVDLNGKKFAWQGVVLLPFIDEVRLLAAMEKKYPLLSADEHARNTVGSDVLLLS 776
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
HPL E K++V K +LN +S+G+ G +
Sbjct: 777 DQHPL------YQELAMNFYSKKQVVPKFKLNMRVSEGLAGKV 813
>gi|212645622|ref|NP_496958.2| Protein XRN-2 [Caenorhabditis elegans]
gi|218511968|sp|Q9U299.2|XRN2_CAEEL RecName: Full=5'-3' exoribonuclease 2 homolog
gi|189309813|emb|CAB54449.2| Protein XRN-2 [Caenorhabditis elegans]
Length = 975
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/793 (45%), Positives = 482/793 (60%), Gaps = 44/793 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL +KYP V + E+ DG ++PVD ++PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDRQRDQDGNRVPVDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP DE+F +F+YIDR++ +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPKNEDEMFALIFEYIDRIYSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ A+ A E R EG +PPK + FDSN ITPGT FMA L+ AL+YYIH
Sbjct: 121 ASKEMAEKEASIEEQRNRLMAEGIAVPPKKKEEAHFDSNCITPGTPFMARLADALRYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+ ND W I++ILSDANVPGEGEHKIM YVR QR P +DPNT HCL G DADLIML
Sbjct: 181 DRVTNDASWANIEIILSDANVPGEGEHKIMDYVRKQRGNPAHDPNTVHCLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP- 298
+ATHE +F+I+RE F P Q C LCGQ GH C G A + GD+ P
Sbjct: 241 GIATHEANFNIIRE-EFVPNQPRACDLCGQYGHELKECRG-----AENETDLGDDYCKPE 294
Query: 299 --KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+K + FL I LREYL+ E +PN PF+ D+E +DD++F+CFFVGNDFLPH+P+LEI
Sbjct: 295 QREKNFIFLRIPVLREYLEKELSMPNLPFKFDVERALDDWVFLCFFVGNDFLPHLPSLEI 354
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
REGAI+ L+ +YK+ + GYLT P L RVE ++ +G ED IF++R + +R
Sbjct: 355 REGAIDRLIKLYKEMVYQMKGYLTKDGIPELDRVEMIMKGLGRVEDEIFKRRQQDEERFQ 414
Query: 417 ERIKREKAQAR--------RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 468
E + +KA+ + Q + VP HG LA +P +
Sbjct: 415 ENQRNKKARMQMYGGGGRGGRGRGRGRGQQPAFVPT---HGI-LAPMAAPMHHSGESTRQ 470
Query: 469 RLDNGKGTSGRPHKVPRLSSGATIGAAI-VEAENSFETDPQENKEEFKAKLKELLRDKSD 527
+ T+ + ++ A + A + V+ E S P + + + L++ + +
Sbjct: 471 MASEARQTAMKFTNDANETAAANLKALLNVKGEES----PADIASRKRKAEQPLIKPEEE 526
Query: 528 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 587
D +D ++L E GWK+RYY KF+ + + E R V Y EGLCWV+ YYY+
Sbjct: 527 ---EDEGPKDDIRLYESGWKDRYYRAKFDVGSDD--IEFRHRVAWAYVEGLCWVLRYYYQ 581
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYR 646
G SW W++PYHYAPFASD + + +F F PF P QL+ VFP+AS LP ++
Sbjct: 582 GCASWDWYFPYHYAPFASDFETVGEFQPDFTRPTKPFNPLEQLMSVFPAASKQHLPVEWQ 641
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
KLM +SPI D YP DF +D+NGK+Y+WQG+A LPF+DE RLL ++ + TLT EE +
Sbjct: 642 KLMIQDDSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDETRLLATLQSVYPTLTAEEKQ 701
Query: 707 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS--PC 764
RN+ + +F+ +H + + + K + V L+P L +G++G I+
Sbjct: 702 RNTRGPNRIFIGRNH----KSFEFFQQVAESKSDDLVP----LDPTLLNGVSGKIAYDST 753
Query: 765 AGDPHPPVFRSPV 777
A P P F SPV
Sbjct: 754 ATAPGLP-FVSPV 765
>gi|242070071|ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
gi|241936155|gb|EES09300.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
Length = 696
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/730 (47%), Positives = 450/730 (61%), Gaps = 75/730 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKP----------NPNGLEYDN 50
MGVP+FY+WL KYP +V E++ ++ +S P PNG+ Y N
Sbjct: 1 MGVPSFYKWLVGKYPNIVVPAKEDDELLAGAGSTSSSSSSPPGDEQTQAAGGPNGV-YHN 59
Query: 51 LYLDMNGIIHPCFHPEDRP-APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRA 109
LYLDMNGIIHPCFHPED+ PTTFDEVF MFDYIDRLF +VRP KLLY+A+DGVAPRA
Sbjct: 60 LYLDMNGIIHPCFHPEDQVYPPTTFDEVFAAMFDYIDRLFRIVRPTKLLYLAVDGVAPRA 119
Query: 110 KMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 169
KMNQQRSRRF+A+KDA ++ EE+ LR++F EGR++ P+ ++V D NVITPGTEFM
Sbjct: 120 KMNQQRSRRFKAAKDAKEAELEEKLLREKFRAEGREVQPRETNEVSDPNVITPGTEFMEK 179
Query: 170 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 229
LS AL+YYI RLN+DPGW+ IK ILSD+NVPGEGEHKIMS++R QR+L YDPNTRHCL
Sbjct: 180 LSKALEYYIRSRLNSDPGWKGIKAILSDSNVPGEGEHKIMSFIRGQRSLESYDPNTRHCL 239
Query: 230 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 289
YGLDADLIMLALA+HE+HFSILRE V Q + C + E +++ G F
Sbjct: 240 YGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKE---LFKTEDSSRKCRGWFP 296
Query: 290 EKGDEVV----VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 345
+ PKKPYQFL+IW LREYL+ + +IPNP + D+E ++DDFIF+CF GN
Sbjct: 297 RMTETTASRDRSPKKPYQFLNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLTGN 356
Query: 346 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK--------PSLRRVEHFIQAV 397
DF+PH+P++EI EGAI+LL+ VYK+ F +GGY+ K + R+E F +
Sbjct: 357 DFIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIVSTEKLKDKHAAYLKVLRLEKFFHEL 416
Query: 398 GSYEDRIFQKRARLHQRHAERIKREKAQ---ARRGDDVEPLAQPDSLVPVSRFHGSRLAS 454
E++IF KR L +R + R A+ R D++E PD
Sbjct: 417 SLCEEKIFVKRYELRERLQRNLVRRAAEEWKERNYDNME--ENPD--------------- 459
Query: 455 GPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEF 514
GP + + S +T G +++ E+D N E
Sbjct: 460 GPDLT--------------------------VKSFSTNGGICTNSQD--ESDVTANTLEL 491
Query: 515 KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ LK+ LR+K D S + D ++LG GWK R++ EKF + E + + D+V +Y
Sbjct: 492 RRNLKDTLRNKQDIVKSGACKHDAIRLGFAGWKSRFFREKFGVEKSNEVGKLKNDMVQKY 551
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
EGLCWV+ YY+ V SW W+YP++YAPF SD K L QF ISF P +PF+QL+ V P
Sbjct: 552 LEGLCWVLRYYFADVPSWSWYYPFYYAPFTSDFKGLSQFKISFTADKPLRPFDQLMAVLP 611
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
SS ALP+ YR+LM + S I FYP+D ++D +GKR+ WQGIA LPFIDE L K
Sbjct: 612 KESSCALPKCYRELMENEESLIKKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLTSATK 671
Query: 695 KIEHTLTEEE 704
+E L +E
Sbjct: 672 TVEDKLAVKE 681
>gi|242011511|ref|XP_002426492.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212510618|gb|EEB13754.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 869
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/726 (47%), Positives = 468/726 (64%), Gaps = 43/726 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL++KYP V+ +EE+P VIDGVKI VD+ +PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSVIVYCVEEKPKVIDGVKISVDSLQPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +FD IDRLF +VRPRKLLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMIEIFDCIDRLFSIVRPRKLLYLAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK++A+ E RLR+E +G LPP K FDSN ITPGT FM LS L YYIH
Sbjct: 121 ASKESAEKIEEITRLREELLNKGAYLPPEKPQESHFDSNCITPGTPFMNRLSACLDYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+LNND W+ IKVILSDA+VPGEGEHKIM ++R QR P +DPNT+H L G DADLIML
Sbjct: 181 DKLNNDAAWKGIKVILSDASVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK---GDEVV 296
LATHE +F+I+RE F P + C +C Q GH +C G K GE E G+EV
Sbjct: 241 GLATHEPNFTIIRE-EFRPNKPKPCEICSQLGHDMKDCIGCPKPLDGEMIETTTFGEEV- 298
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
P+ F+ + LREYL+ E +P PF+ D E ++DD++FMCFFVGNDFLPH+P+LEI
Sbjct: 299 ----PFIFVRLSVLREYLEKELTMPGLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEI 354
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
REGAI+ L+ +YK GG++TD +L RV+ + +G ED IF+ H++
Sbjct: 355 REGAIDRLVNLYKNCVYKTGGFVTDSGDVNLNRVQLILNELGKVEDEIFK-----HRQQT 409
Query: 417 ERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGT 476
E + + + A++ ++ + + +PV +F +P+P Q+ + + + T
Sbjct: 410 ELMYKRRNAAKKRIALQYKNEIPASLPVGQF---------APTPLGQNFQPPAIVSPRQT 460
Query: 477 SGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
+ R ++ S + I A + D + K LKE ++ + +
Sbjct: 461 A-RDMRIQASHSNSHIEALL--------KDESSERRGNKRPLKEDSMEEEETY------- 504
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D+V+L E G+K+RYYE KF+ K+ + + R V Y GLCWV+ YYY+G SW+WF+
Sbjct: 505 DEVRLWEDGFKDRYYESKFDVKS--DNIDFRIRVAHEYVRGLCWVLRYYYQGCASWKWFF 562
Query: 597 PYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
PYHYAPFASD ++ + FE G PFKP QL+GVFP ASS +P+ + LM DP S
Sbjct: 563 PYHYAPFASDFINIGNLSTQFEKGTQPFKPLEQLMGVFPPASSSHVPKSWAVLMHDPLSS 622
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DF++D+NGK+++WQG+A LPF+DE RL + + LT E RN+ D +
Sbjct: 623 IIDFYPLDFKIDLNGKKFAWQGVALLPFVDEKRLFRALAPLYDLLTPAEKIRNTQGDDKI 682
Query: 716 FVLLSH 721
++ +++
Sbjct: 683 YLGINN 688
>gi|322709893|gb|EFZ01468.1| 5'->3' exoribonculease Dhp1 [Metarhizium anisopliae ARSEF 23]
Length = 930
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/800 (44%), Positives = 482/800 (60%), Gaps = 60/800 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE++PVV+ DG +PVDTS NPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSIVPVDTSSRNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP + + +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDKPAPEDEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPP----KSDSQVFDSNVITPGTEFMAVLSIAL 174
R+++DA + ++ L + +++ G LPP +VFD+N ITPGT FM +L+++L
Sbjct: 121 RSAQDAKEKEENKKELLKLVKQQNGGVLPPDHIESVAKKVFDNNSITPGTPFMDILAVSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W K+KV++SDA VPGEGEHKIMS++R QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE V F G+ C LCGQ GH A NC G+AK KA + D+K
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEGRARTCQLCGQKGHEARNCRGEAKEKADDVDDKPG 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
V + KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVGNDFLPH+P
Sbjct: 301 NVTL--KPFIWLHVSVLREYLAAELAVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L +++ +GGY+T L R + + + ED IF++R
Sbjct: 359 LEIREHGIDTLTTIWRNNLPTMGGYVTKDGHIDLERAQRILDGLAKQEDEIFKRRKEQED 418
Query: 414 RHAERIKREKAQ-------ARRGDDVEPL-------AQPDSLVPVSRFHGSRLASGPSPS 459
R KR K Q RG E +Q L P+S +
Sbjct: 419 RREANAKRRKLQQNNNSYRGSRGSLTEDRKYGHHDPSQGLPLYPISSY------------ 466
Query: 460 PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE--NSFETDPQENKEEFKAK 517
P + + +S + V S+ + I I EA S T+P+ + +
Sbjct: 467 PKEPPRAITHDMVVNKSSAQAANVANKSAASIIKDQIREANRHGSVTTEPEASSSILGKR 526
Query: 518 LKELLRDKS-----------DAFNSDNPEE-----DKVKLGEPGWKERYYEEKFNAKTPE 561
E D A +++P D V+L E G+ +RYY++KF+ ++P+
Sbjct: 527 KAESQSDTETANTNTEVGTVQASKTEHPASAEDHIDTVRLWEDGYADRYYQQKFH-RSPD 585
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
+ R +V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KDL +I FE G
Sbjct: 586 DI-SFRHEVARAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDLANMDIIFEKGR 644
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
KPF QL+ V P+AS HALPE + LMTD +S I DFYP DFEVD+NGK+ +WQG+A L
Sbjct: 645 VSKPFEQLMSVLPAASRHALPEVFHPLMTDEDSEIIDFYPEDFEVDLNGKKMAWQGVALL 704
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKE 741
PFID RLL V+ L+ EA RN+ D VLL + S+Y D+ + K
Sbjct: 705 PFIDMPRLLAAVQTKYPLLSSAEAARNATGRD---VLLLSDNNGSMY--DDILTKFYSKR 759
Query: 742 RVEVKERLNPELSDGMNGYI 761
+ K +LNP+ SDG++G +
Sbjct: 760 QECSKFKLNPKNSDGLSGKV 779
>gi|431894120|gb|ELK03920.1| 5'-3' exoribonuclease 2 [Pteropus alecto]
Length = 1091
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/775 (46%), Positives = 472/775 (60%), Gaps = 84/775 (10%)
Query: 25 EPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDY 84
+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+Y
Sbjct: 137 DPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEY 196
Query: 85 IDRLFVMVRPRKLLYMAIDGV-----------------------------APRAKMNQQR 115
IDRLF +VRPR+LLYMAIDGV APRAKMNQQR
Sbjct: 197 IDRLFNIVRPRRLLYMAIDGVDKEYLEIDGQWKGMDGTDMGKEDLPDFSDAPRAKMNQQR 256
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
SRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+
Sbjct: 257 SRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLR 316
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DAD
Sbjct: 317 YYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADAD 376
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D +
Sbjct: 377 LIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSL 435
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LE
Sbjct: 436 PCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLE 495
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR------- 408
IREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 496 IREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 555
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 468
R + +R+KR++ G + P A P GS++AS P + Y+
Sbjct: 556 RRRQKEKRKRMKRDQPAFTPGGILTPHALGSRNSP-----GSQVASNPRQAAYEM----- 605
Query: 469 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 528
R+ N S P+ SF +D + L + R D+
Sbjct: 606 RMQNNSSPSVSPN-------------------TSFTSDGS------PSPLGGIKRKAEDS 640
Query: 529 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 588
+ P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 641 DSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQG 697
Query: 589 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 647
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RK
Sbjct: 698 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 757
Query: 648 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 707
LM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RR
Sbjct: 758 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 817
Query: 708 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
NS+ D+LFV H L I L Q E ++V PEL G+ G S
Sbjct: 818 NSLGGDVLFVGKHHLLHDFILQL----YQTGSTEPMDVP----PELCHGIQGKFS 864
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI 29
MGVPAF+RWL+ KYP ++ + +EE+ +
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAAAL 29
>gi|322692778|gb|EFY84668.1| 5'-3' exoribonuclease 2 [Metarhizium acridum CQMa 102]
Length = 929
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/800 (44%), Positives = 482/800 (60%), Gaps = 60/800 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE++PVV+ DG +PVDT+ NPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSTVPVDTTSRNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP + + +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCAHPEDKPAPEDEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPP----KSDSQVFDSNVITPGTEFMAVLSIAL 174
R+++DA + +E L + +++ G LPP ++FD+N ITPGT FM +L+++L
Sbjct: 121 RSAQDAKEKEENKEELLKLVKQQNGGVLPPDHIESVAKKIFDNNSITPGTPFMDILAVSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W K+KV++SDA VPGEGEHKIMS++R QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE V F G+ C LCGQ GH A NC G+AK KAG+ D+K
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEGKARTCQLCGQKGHEARNCRGEAKEKAGDIDDKPG 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVGNDFLPH+P
Sbjct: 301 NATL--KPFIWLHVSVLREYLAAELAVPALPFRFDLERAIDDWVFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L +++ +GGY+T L R + + + ED IF++R
Sbjct: 359 LEIREHGIDTLTTIWRNNLPTMGGYVTKDGHIDLERAQRILDGLAKQEDAIFKRRKEQED 418
Query: 414 RHAERIKREKAQ-------ARRGDDVEPL-------AQPDSLVPVSRFHGSRLASGPSPS 459
R KR K Q RG+ E +Q L P+S +
Sbjct: 419 RREANAKRRKLQHDNNSYRGSRGNLAEDRKYGHHDPSQGLPLYPISSY------------ 466
Query: 460 PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI----------VEAENSF------ 503
P + + +S + V S+ + I I E E S
Sbjct: 467 PKEPPRAITHDMVVNKSSAQAANVANKSAASIIKDQIRAANRHDPVGAEPETSSSILGKR 526
Query: 504 ETDPQENKE--EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE 561
+ +PQ + E AK+ + K + D V+L E G+ +RYY++KF+ ++P+
Sbjct: 527 KAEPQSDTETANTNAKVGTVQASKPEYPAPAEDPIDTVRLWEDGYADRYYQQKFH-RSPD 585
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
+ R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D KDL +I+FE G
Sbjct: 586 D-ISFRHKVARAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDLANMDIAFEKGR 644
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
KPF QL+ V P+AS HALPE + LMTD +S I DFYP DFEVD+NGK+ +WQG+A L
Sbjct: 645 VSKPFEQLMSVLPAASRHALPEVFHPLMTDEDSEIIDFYPEDFEVDLNGKKMAWQGVALL 704
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKE 741
PFID RLL V+ L+ EA RN+ D VLL + S+Y D+ + K
Sbjct: 705 PFIDMPRLLAAVQNKYPLLSSAEAARNARGRD---VLLLSDNNGSMY--DDILTKFYSKR 759
Query: 742 RVEVKERLNPELSDGMNGYI 761
+ K +LNP+ SDG++G +
Sbjct: 760 QECSKFKLNPKNSDGLSGKV 779
>gi|198471914|ref|XP_001355769.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
gi|198139522|gb|EAL32828.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
Length = 916
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/794 (44%), Positives = 467/794 (58%), Gaps = 75/794 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KY V+ D E + V D G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYASVIIDCNENKQVDPDTGKNIYEDATLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +FD IDRLF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM LS L YY+
Sbjct: 121 RAAKETTEKRMEIARIREELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYV 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H R NN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIM
Sbjct: 181 HDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C Q GH C G + + + K D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDICNQFGHEMDKCVGLSAVGSSGANFKPDVAIGA 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL +PN PFE D E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 300 EVKFIFVRLSVLREYLKQTLEMPNLPFEYDFERTLDDWVFMCFFVGNDFLPHLPSLEIRE 359
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R R Q+ R
Sbjct: 360 GAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREQQFKAR 419
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
K+ + Q D + GP+ G G +G
Sbjct: 420 EKQRQRQDHSALD-------------------QSVFGPTAV-------------GGGRNG 447
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
+P + A AA+ + D ++ +E + D+
Sbjct: 448 QPSSIANYKQEA---AALRTGQKRPNEDTKDEEE----------------------DNDE 482
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E G+K RYYE KF+ E R V L+Y GLCWV+ YYY+G SW W++PY
Sbjct: 483 VRLWEDGFKSRYYESKFDVAP--ENHSFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 540
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD ++ + +FE G PF P QL+GVFP+ASS +PE + +LM+ P+SPI
Sbjct: 541 HYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAELMSSPDSPII 600
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT E +RN + L++
Sbjct: 601 DFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYTQLTGAEVKRNKQGHNFLYI 660
Query: 718 LLSHPLSASIYTLDEHCKQL-KIKERVEVKERLNPELSDGMNGYISPCAGDPH-PPVFRS 775
S P H K++ KI E + +++ N +GM G I D S
Sbjct: 661 SNSSP----------HYKKVKKITESTDTEDQCNAISFNGMRGTILRSDIDTAIDGCLPS 710
Query: 776 PVASMEDIMGNQVL 789
P+A + DI GN ++
Sbjct: 711 PIAGLPDITGNTIV 724
>gi|195038968|ref|XP_001990842.1| GH18033 [Drosophila grimshawi]
gi|193895038|gb|EDV93904.1| GH18033 [Drosophila grimshawi]
Length = 873
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/795 (44%), Positives = 472/795 (59%), Gaps = 69/795 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL++KYP V+ + E + V D G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPCVIIECNENKQVDPDTGKNIYEDATLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP +E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEEEMMIAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+A + E ER+R E G KLPP K + FDSN ITPGT FM LS L YYI
Sbjct: 121 RAAKEATEKRLEIERIRDELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H RLNN+P W+ +K+ILSDANVPGEGEHKIM Y+R QR P +DPNT H L G DADLIM
Sbjct: 181 HDRLNNNPAWKGVKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C Q GH C G + + + D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSNNINSPPDVPIGA 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL +PN PF D E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 300 EVKFIFVRLSVLREYLRKTLEMPNLPFSYDFERALDDWVFMCFFVGNDFLPHLPSLEIRE 359
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA++ L+ +YKK YLT+ SL RV+ + +G+ ED+IF+ R R Q++ R
Sbjct: 360 GAVDRLVELYKKCVYKARDYLTNSGDVSLDRVQLIMTDLGNVEDQIFKDRQRREQQYKAR 419
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL--DNGKGT 476
KRE +A P+A + V + + Y+Q R+ ++ +GT
Sbjct: 420 QKRENHKALEQSAFGPMAVGRNNAAVDKIITN----------YKQEASAVRMGSNDSQGT 469
Query: 477 SGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
R S+ A + A D +EN
Sbjct: 470 K-------RSSTNANLDDA----------DEEENN------------------------- 487
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D+V+L E G+K RYYE KF+ + + R V L+Y GLCWV+ YYY+G SW W++
Sbjct: 488 DEVRLWEDGFKNRYYESKFDVAS--GNLQFRYAVALQYVRGLCWVLKYYYQGCASWNWYF 545
Query: 597 PYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
PYHYAPFASD ++ + +FE G PF P QL+GVFP+ASS +PE + +LM+ P S
Sbjct: 546 PYHYAPFASDFVNIQGLSTTFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAQLMSKPEST 605
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DF++D+NGK+++WQG+A LPF+DE RL + + LT+EE +RN + L
Sbjct: 606 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALGPLHIQLTDEEVQRNKRGDNNL 665
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPC-AGDPHPPVFR 774
++ P +I L E ++K +P DGM G IS +
Sbjct: 666 YISKCSPHFKTINKLYEAGDNSQLKN--------SPSSFDGMTGTISKSEINTALNGQLK 717
Query: 775 SPVASMEDIMGNQVL 789
SP+ + DIM N+V+
Sbjct: 718 SPIPGLPDIMNNEVV 732
>gi|301111760|ref|XP_002904959.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
gi|262095289|gb|EEY53341.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
Length = 972
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/715 (48%), Positives = 450/715 (62%), Gaps = 55/715 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKI--PVDTSKPNPNGLEYDNLYLDMNGI 58
MGVPAFYRW+ EKYP V D +E VV++G + DT+ P+PNG E DNLY+DMNG+
Sbjct: 1 MGVPAFYRWVQEKYPKCVVDCVESRAVVLEGERHFELTDTTGPSPNGFEVDNLYVDMNGL 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPE+ AP T +E+++ + Y+DRL VRPR++LY+AIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCAHPENGEAPKTEEEMYRRVMAYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++++A E+ + G K+P K + + +DSNVITPGT+FMA L+ L++YI
Sbjct: 121 FRSAQEAEQRMEVEKEALEYMSALGHKVPSKQE-KPWDSNVITPGTKFMAKLAKHLRFYI 179
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
R+NN+ W+ IK+ILSDA VPGEGEHK+M Y+R+QR+ PGYDPN H L+GLDADLIM
Sbjct: 180 RDRVNNNAAWKSIKIILSDAGVPGEGEHKLMQYIRVQRSQPGYDPNQHHVLHGLDADLIM 239
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK-GDEVV 296
L LATHEV FSILR EV+F + ++ Q L AN KRK GEF E D V
Sbjct: 240 LGLATHEVKFSILREEVLFGKQKYERERQKEQQTVLDANGTTLNKRKRGEFGEHDADLVA 299
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
KP Q+LHI TLREYL EF + PFE D E ++DDF+F+CFFVGNDFLPH+P+L
Sbjct: 300 SDLKPLQYLHIATLREYLQVEFEPLSRVLPFEYDFERVIDDFVFLCFFVGNDFLPHLPSL 359
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IR+GA++ L+ +Y K A+GGY+TDG L RV+ + VG ED IFQ+RA L Q
Sbjct: 360 DIRDGALDFLILIYAKLLPAMGGYITDGGHVDLSRVDVILAEVGQVEDVIFQRRA-LKQA 418
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
ER ++ + D + A DS V + + R+D
Sbjct: 419 ENERRRKSHLSNEKKDQIAAAAAKDSAVEILKKR--------------------RIDKD- 457
Query: 475 GTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
I+ A+ + E E KA++KE + K + + +
Sbjct: 458 ---------------------IIAADKKYGGLTAE--EAVKARVKESVEKKLEQYREE-- 492
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
+D V+LGEPGWK RYY +K A E R+ V Y EGLCWVM YYY G SWQW
Sbjct: 493 VQDVVRLGEPGWKTRYYSDKLKADDIEV-GGGRERVFHAYIEGLCWVMRYYYTGCASWQW 551
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
FYP+HYAPFASDL+++D+F I F+ G PF PF QL+GVFP+ S HA+P+ YR LM+DP S
Sbjct: 552 FYPFHYAPFASDLRNIDRFEIKFDEGLPFHPFEQLMGVFPAGSGHAIPKPYRSLMSDPES 611
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
PI DFYPT+ VD NGK W + LPFIDE RLL+ +K+ LTE E +RN+
Sbjct: 612 PIIDFYPTEIPVDPNGKAMPWLWVVLLPFIDEERLLEAMKEPNQKLTEAEKKRNA 666
>gi|402074937|gb|EJT70408.1| 5'-3' exoribonuclease 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1040
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/762 (44%), Positives = 468/762 (61%), Gaps = 56/762 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE++P+ +D G IPVDT+KPNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPIEMDDGTVIPVDTAKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCAHPEDRPAPKDEEEMMLEIFRYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEE-ERLRQEFEREGRKLPPKS----DSQVFDSNVITPGTEFMAVLSIAL 174
R++++A + A ++ E L+ ++ G + P++ + FD+N ITPGT FM +L+ +L
Sbjct: 121 RSAQEAKEKAEDKMELLKLLKQQNGGDVAPETLESVTKKAFDTNSITPGTPFMLILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W +K+I+SDA VPGEGEHKIM +VR QR+ P +DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWANLKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTP-GQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF G+ C LCGQ GH A NC G+AK+K GEFDEK
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQQGKARMCKLCGQKGHDAQNCRGEAKKKEGEFDEK-- 298
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
E P KP+ +LH+ LREYL E + N PF DLE VDD+IF+C FVGNDFLPH+P
Sbjct: 299 EKAEPLKPFIWLHVSVLREYLAVELEVSNLPFRFDLERAVDDWIFLCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE IN L ++K+ +GGY+T L R++ + + ED IF+KR
Sbjct: 359 LEIRENGINTLTNIWKRNLATMGGYVTKDGHIDLERIQVIMNGLAQQEDSIFRKRKESED 418
Query: 414 RHAERIKREKAQ------ARRGDDVEP---LAQPDSLV--------PVSRFHGSRLASGP 456
R KR K Q R+G E +A+P ++ ++ + +A+
Sbjct: 419 RKEANAKRRKLQDDREKYGRKGGQNESFGGIAEPGKIITHDMVVNRAATQAQDANVANKS 478
Query: 457 SPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA 516
+ S + G+ T P + P + G ++E+S ++ P E A
Sbjct: 479 AASILKSQIKALSAPAGEAT---PPETPVKNGG--------DSEDSKDSKPDTPASETPA 527
Query: 517 -----KLKELLRDKSDAFNSDNPEE------------DKVKLGEPGWKERYYEEKFNAKT 559
+ ELL D + ++P D V++ E G+ +RYYE+KF+A
Sbjct: 528 SALGKRKAELLEDGDSSAGPNSPAPGTPYSGAAEGPVDTVRMWESGYSDRYYEQKFHADP 587
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ R V Y EGL WV+ YY++G SW+W+YPYHYAPFA+D + L ISFE
Sbjct: 588 KDVG--FRHKVAHAYVEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFQGLADLKISFEK 645
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G +P+ QL+ V P+AS LP + LMT+ +S I DFYP DFE+D+NGK+++WQG+
Sbjct: 646 GRTSRPYEQLMSVLPAASRDNLPPVFHDLMTNEDSEIIDFYPEDFELDLNGKKFAWQGVV 705
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 721
LPFI+ RLL V+ LT EEA RN + ++L + +H
Sbjct: 706 LLPFIEMDRLLAAVEAKYPLLTPEEAARNGVGKEVLILSDAH 747
>gi|341884867|gb|EGT40802.1| hypothetical protein CAEBREN_29959 [Caenorhabditis brenneri]
Length = 992
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/819 (44%), Positives = 487/819 (59%), Gaps = 56/819 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL +KYP + + E+ + DG + P+D ++PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATIVNANEDRQRLDDGRRAPIDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP P DE+F +F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPPPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ A+ AA E R+ EG +PPK + + FDSN ITPGT FMA L+ AL+YYIH
Sbjct: 121 ASKEMAEKAASIEEQRRRLMAEGIAVPPKKEEEAHFDSNCITPGTPFMARLADALRYYIH 180
Query: 180 LRLNNDPGWEKI-------------------------KVILSDANVPGEGEHKIMSYVRL 214
R+ ND W I ++ILSDANVPGEGEHKIM Y+R
Sbjct: 181 DRITNDAAWANIEFIPRIPRNYHQSYPEFSKFIEINFQIILSDANVPGEGEHKIMDYIRK 240
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 274
QR P +DPNT HCL G DADLIML +ATHE +F+I+RE F P Q C LCGQ GH
Sbjct: 241 QRGNPAHDPNTVHCLCGADADLIMLGIATHEANFNIIREE-FVPNQPRACDLCGQYGHEL 299
Query: 275 ANCEGKAKRKAGEFDEKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLEC 331
C G A + GD+ P+ K + FL I LREYL+ E +PN PF+ DLE
Sbjct: 300 KECRG-----AENDTDLGDDYCKPEQREKNFIFLRIPVLREYLEKEMAMPNLPFQFDLER 354
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 391
+DD++F+CFFVGNDFLPH+P+LEIREGAI+ L+ +YK+ + GYLT P L RVE
Sbjct: 355 ALDDWVFLCFFVGNDFLPHLPSLEIREGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVE 414
Query: 392 HFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR 451
++ +G ED IF++R + +R E K +KA+ ++ P +
Sbjct: 415 MIMKGLGKVEDEIFKRRQQDEERFKESQKHKKARMQQFGGRGRGRGRGRGQPAYVPNHGI 474
Query: 452 LASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK 511
LA P +P S G + R + + + AA ++A +E+
Sbjct: 475 LA--PMSAPMHHS---GESTRQMASDARQMAMQYNNDANAVAAAHLKA--LLNIKGEESP 527
Query: 512 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 571
E ++ ++ + D +D ++L E GWK+RYY KF+ + + E R V
Sbjct: 528 AEVASRKRKAEQPLILPEEEDEEPKDDIRLFESGWKDRYYRAKFDVGS--DDVEFRHRVA 585
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLL 630
Y EGLCWV+ YYY+G SW W++PYHYAPFASD + + F F PF P QL+
Sbjct: 586 WAYVEGLCWVLRYYYQGCSSWDWYFPYHYAPFASDFETVGDFKPDFSRPTKPFNPLEQLM 645
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
VFP+AS LP ++KLMT+ SPI D YP DF +D+NGK+Y+WQG+A LPF+DE RLL
Sbjct: 646 SVFPAASKQHLPVEWQKLMTEDESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLL 705
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN 750
+ +K + TLT+EE RN+ + +F+ +H A T+ E K E V+ L+
Sbjct: 706 ETLKTVYPTLTDEEKMRNTRGPNRIFIGRNHKSFAFFNTVAES----KSTELVD----LD 757
Query: 751 PELSDGMNGYISPCAGDPHPPV-FRSPV--ASMEDIMGN 786
P L +G++G I+ + P + F SPV A +D+ N
Sbjct: 758 PSLLNGVSGKIAADSTATAPGLPFVSPVNHADCQDLPTN 796
>gi|313232494|emb|CBY24162.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 352/791 (44%), Positives = 484/791 (61%), Gaps = 36/791 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL + +V + +EE IDGV +P+D S NPNG+E+DNLY+DMNG+IH
Sbjct: 1 MGVPAFFRWLQRRCGSIVVNCVEEPQKEIDGVTVPIDLSGANPNGVEFDNLYIDMNGVIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP +E+F+C+FD +DR+ +VRPRKLLY+AIDG APRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPAPRNEEEIFECIFDALDRMMNIVRPRKLLYLAIDGPAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A+K++ + + E ER G +LPP + FDSN ITPGTEFM L+ AL++YI
Sbjct: 121 AAKESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDRLAKALRFYIS 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN + GW+++ VILSDA+VPGEGEHKI+ Y+R QRN P +DPNT HC++G DADLIML
Sbjct: 181 ERLNKEAGWQELNVILSDASVPGEGEHKIIDYIRKQRNTPTHDPNTHHCIWGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F G+ C LCGQ GH +C G E E + V K
Sbjct: 241 GLATHEPNFTIVREE-FVYGKPKPCVLCGQCGHELIDCLGLP-----EGVEDKEPPVFSK 294
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ I T+RE++ E +IPN P DLE I+DD+I +CFFVGNDFLPH+P+L IREG
Sbjct: 295 GNYIFIRIATVREWIAQELQIPNIPITWDLENIIDDWILLCFFVGNDFLPHLPSLSIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YK+ + Y+T +L+ VE ++++G ED IF+KR + + R
Sbjct: 355 AIDKLVGIYKRTVCEMKSYMTKDGTVNLKAVEFVMRSIGRMEDAIFKKRRQEECQRRVRD 414
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+R K Q R + + ++ H + +A P ++ R +
Sbjct: 415 ERRKHQDR-----------NKRLNRNQVHQTPVAKSGVMEPKMVNQH-QRKAKAHDLNKT 462
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
++ + ++ A + AA +E + D ++ AK + + ++D NS ED+V
Sbjct: 463 ARQIRQEAAEARLTAAKLE-----DQDTEQITLSALAKARAMQARQND--NSALDAEDEV 515
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E GWK+RY+ KF+ + + ++ VV YTEGLCWV YY++G W W+YPYH
Sbjct: 516 RLFEDGWKDRYFRTKFDVSADDN--DFKRAVVGAYTEGLCWVFAYYFQGCLDWGWYYPYH 573
Query: 600 YAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD LD I+++ P KP QL+ VFP+ S LP +RKLM+DP+S I D
Sbjct: 574 YAPFASDFVHLDSVEINWQRDAKPRKPLEQLMCVFPAGSGEFLPPSWRKLMSDPDSQIID 633
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
YPTDF VD+NGK++ W G+A LPF+DEARL + K+ LTE+E RRN + D LFV
Sbjct: 634 MYPTDFVVDLNGKKFEWMGVALLPFLDEARLHRTLAKVYGDLTEDEKRRNGVGEDKLFVG 693
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSD--GMNGYISPCA-GDPHPPVFRS 775
+ + + + E K KE +E + E D G+ G IS A +P +S
Sbjct: 694 RRNKIYGKLRDVYETDK----KEFHMAEEGADIEAKDIHGIQGIISIDAMCNPEDTFLQS 749
Query: 776 PVASMEDIMGN 786
P EDI N
Sbjct: 750 PGDFCEDINNN 760
>gi|313246745|emb|CBY35616.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 352/791 (44%), Positives = 484/791 (61%), Gaps = 36/791 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL + +V + +EE IDGV +P+D S NPNG+E+DNLY+DMNG+IH
Sbjct: 1 MGVPAFFRWLQRRCGSIVVNCVEEPQKEIDGVTVPIDLSGANPNGVEFDNLYIDMNGVIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP +E+F+C+FD +DR+ +VRPRKLLY+AIDG APRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPAPRNEEEIFECIFDALDRMMNIVRPRKLLYLAIDGPAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A+K++ + + E ER G +LPP + FDSN ITPGTEFM L+ AL++YI
Sbjct: 121 AAKESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDRLAKALRFYIS 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN + GW+++ VILSDA+VPGEGEHKI+ Y+R QRN P +DPNT HC++G DADLIML
Sbjct: 181 ERLNKEAGWQELNVILSDASVPGEGEHKIIDYIRKQRNTPTHDPNTHHCIWGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F G+ C LCGQ GH +C G E E + V K
Sbjct: 241 GLATHEPNFTIVREE-FVYGKPKPCVLCGQCGHELIDCLGLP-----EGVEDKEPPVFLK 294
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ I T+RE++ E +IPN P DLE I+DD+I +CFFVGNDFLPH+P+L IREG
Sbjct: 295 GNYIFIRIATVREWIAQELQIPNIPITWDLENIIDDWILLCFFVGNDFLPHLPSLSIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YK+ + Y+T +L+ VE ++++G ED IF+KR + + R
Sbjct: 355 AIDKLVGIYKRTVCEMKSYMTKDGTVNLKAVEFVMRSIGRMEDAIFKKRRQEECQRRVRD 414
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+R K Q R + + ++ H + +A P ++ R +
Sbjct: 415 ERRKHQDR-----------NKRLNRNQVHQTPVAKSGVMEPKMVNQH-QRKAKAHDLNKT 462
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
++ + ++ A + AA +E + D ++ AK + + ++D NS ED+V
Sbjct: 463 ARQIRQEAAEARLTAAKLE-----DQDTEQITLSALAKARAMQARQND--NSALDAEDEV 515
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E GWK+RY+ KF+ + + ++ VV YTEGLCWV YY++G W W+YPYH
Sbjct: 516 RLFEDGWKDRYFRTKFDVSADDN--DFKRAVVGAYTEGLCWVFAYYFQGCLDWGWYYPYH 573
Query: 600 YAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD LD I+++ P KP QL+ VFP+ S LP +RKLM+DP+S I D
Sbjct: 574 YAPFASDFVHLDSVEINWQRDAKPRKPLEQLMCVFPAGSGEFLPPSWRKLMSDPDSQIID 633
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
YPTDF VD+NGK++ W G+A LPF+DEARL + K+ LTE+E RRN + D LFV
Sbjct: 634 MYPTDFVVDLNGKKFEWMGVALLPFLDEARLHRTLAKVYGDLTEDEKRRNGVGEDKLFVG 693
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSD--GMNGYISPCA-GDPHPPVFRS 775
+ + + + E K KE +E + E D G+ G IS A +P +S
Sbjct: 694 RRNKIYGKLRDVYETDK----KEFHMAEEGADIEAKDIHGIQGIISIDAMCNPEDTFLQS 749
Query: 776 PVASMEDIMGN 786
P EDI N
Sbjct: 750 PGDFCEDINNN 760
>gi|426391130|ref|XP_004061937.1| PREDICTED: 5'-3' exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 1099
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 364/792 (45%), Positives = 475/792 (59%), Gaps = 88/792 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 194 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 253
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 254 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 313
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 314 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 373
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 374 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 433
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 434 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 492
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 493 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 552
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 553 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRK----------D 602
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
E + RR + + S+ P + F S SPSP
Sbjct: 603 DEDSFRRRQKEKRKRMKSPSISPNTSF-----TSDGSPSP-------------------- 637
Query: 481 HKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
+G +AE+S E +P++N ++A K+ R + F+ D +
Sbjct: 638 -----------LGGIKRKAEDSDSEPEPEDNVRLWEAGWKQ--RYYKNKFDVDAAD---- 680
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
EKF K + E V+ Y +G SW+W+YP+H
Sbjct: 681 -------------EKFRRKVVQSYVEGLCWVLRYYYQG-----------CASWKWYYPFH 716
Query: 600 YAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I D
Sbjct: 717 YAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIID 776
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV
Sbjct: 777 FYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVG 836
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPV 777
HPL I L Q E V+V PEL G+ G S P + SPV
Sbjct: 837 KHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQIVCSPV 888
Query: 778 ASMEDIMGNQVL 789
+ D+ N V+
Sbjct: 889 PMLRDLTQNTVV 900
>gi|357615796|gb|EHJ69836.1| hypothetical protein KGM_03375 [Danaus plexippus]
Length = 699
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 337/708 (47%), Positives = 445/708 (62%), Gaps = 52/708 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + +E+ P +DG I D+S PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQRPTDVDGQLIYADSSLPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P P DE+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPPPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ + E R+R E + +G LPP+ + FDSN ITPGT FM LS L YYIH
Sbjct: 121 ASKETQEKIDEIARIRNELQVKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW+ +KVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIML
Sbjct: 181 DRLNNDPGWKGVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH C G + + D +
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPRPCDVCGQLGHEMKECTGTTPDASL---VRSDPSFGNQ 296
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + LREYL+ E +PN PF+ D E +DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 297 DSFIFVRLTVLREYLEKELSMPNLPFKYDFERALDDWVFMCFFVGNDFLPHLPSLEIREG 356
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
A++ L+ +YKK G++TD +L RV+ + +G ED IF++R HQ
Sbjct: 357 AVDRLVNLYKKCVYKTRGWITDSGDVNLDRVQVIMDELGRVEDEIFRRR---HQNELSFK 413
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
REK + ++ + E L+ ++F +P + E ++N +
Sbjct: 414 AREKNKKQQKINFE-------LLEKTQF-----------APVKVGEESKTVENAR----- 450
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
A I A ++A E + + K R A D+ D+V
Sbjct: 451 -------KEAANIRLAGMQAVAEAEKEQRGQK-----------RSAEQAGLDDDDAHDEV 492
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+KERYYE KF + + E R V L+Y GLCWV+ YYY+G SW+W++PYH
Sbjct: 493 RLWEEGFKERYYESKF--EVARDNLEFRYRVALQYVRGLCWVLRYYYQGCASWKWYFPYH 550
Query: 600 YAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD ++ + FE G PF+P QL+GVFP+ASS +P + LM+DP SPI D
Sbjct: 551 YAPFASDFVNIQGLSTKFERGTQPFRPLEQLMGVFPAASSQHVPRPWATLMSDPFSPIID 610
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
FYPTDF++D+NGK+++WQG+A LPF+DE RL ++ LT+ E++
Sbjct: 611 FYPTDFKIDLNGKKFAWQGVALLPFVDETRLFKALEPYYDDLTQAESQ 658
>gi|339249025|ref|XP_003373500.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
gi|316970366|gb|EFV54322.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
Length = 820
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 357/807 (44%), Positives = 479/807 (59%), Gaps = 76/807 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP +V + IE+ P +DG +PVD ++PNP+G+E+D YLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIVMNCIEDTPRDVDGTTVPVDNTQPNPHGIEFDTFYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP + +E+ +F+YIDRL +VRPR+LLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 61 PCCHPEDKPAPKSEEEMMVAIFEYIDRLMCIVRPRRLLYMAIDGVAPRAKMNQQRTRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+AA+ + ++R++ +G LP +S D Q FDSN ITPGT FMA L+I L+YYIH
Sbjct: 121 ASKEAAEKEEQIRQIREDLRAQGIPLPAESTDKQHFDSNCITPGTPFMARLAICLRYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN DP W+ + VILSDA+VPGEGEHKIM Y+R QR +DPNT H L G DADLIML
Sbjct: 181 ERLNTDPAWQNLLVILSDASVPGEGEHKIMDYIRHQRACASHDPNTHHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P C +C GH +C+G + + +E+ V+ K
Sbjct: 241 GLATHEPNFTIIRE-EFVPNLPRPCEICNNYGHTMQDCQGLSILENE--NEEAHRPVLKK 297
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + LREYL E +PN F+ D E VDD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 298 TQFIFIRLSVLREYLQRELEMPNIKFKYDFERCVDDWVFMCFFVGNDFLPHLPSLEIREG 357
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA--- 416
AI+ L+ +YK GGYLT+ +L+RV+ + +G ED IF++R +R A
Sbjct: 358 AIDRLVKLYKDCVYRTGGYLTENGFVNLKRVQLIMSELGKVEDEIFRQR---QEREAMDN 414
Query: 417 ----ERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
+ I+ R E P + +P + F + + P P L N
Sbjct: 415 IFLLDWIQFSNKAKMRRMQAENFDAP-AFIPQNAFAPTPIGESPLP-----------LSN 462
Query: 473 GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD 532
K T+ + + +T K EF + DA N +
Sbjct: 463 AKRTAMEMRQAAMAVTSST-------------------KREFNGAA-----NAEDA-NDE 497
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
P D+V+L E GWK+RYY KF +P++ E R V Y EGLCWV+ YYY+G CSW
Sbjct: 498 GP-LDEVRLWECGWKDRYYLVKFQC-SPKDL-EFRHHVANCYVEGLCWVLRYYYQGCCSW 554
Query: 593 QWFYPYHYAPFASDLKDLDQFNISF-ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
+W++P+HY+PFASD ++ I F E P KP QL+ VFP+ASS LP+ + LM D
Sbjct: 555 KWYFPFHYSPFASDFLNIGDLKIDFSEKTMPIKPLEQLMSVFPAASSKHLPKSWAALMHD 614
Query: 652 P---NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
P S I D YP+DF+VD+NGKRY+WQG+ LPF+D RL + ++ + LTEEE RN
Sbjct: 615 PVRDKSTIIDMYPSDFKVDLNGKRYAWQGVVLLPFVDAERLNEALEVVYPDLTEEERFRN 674
Query: 709 SIMADMLFVLLSHP---LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCA 765
D+LF+ H SIY D + L ++P L +G++ + P
Sbjct: 675 KQGNDLLFISSKHEAFDFIQSIYEGDMSAEWLN----------MDPSLCNGISLMVKPYK 724
Query: 766 GDPHPPV---FRSPVASMEDIMGNQVL 789
H PV SP+ D+ N VL
Sbjct: 725 F--HVPVGKTVHSPLPQCNDVENNHVL 749
>gi|326471133|gb|EGD95142.1| 5'-3' exoribonuclease [Trichophyton tonsurans CBS 112818]
Length = 1066
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 359/812 (44%), Positives = 486/812 (59%), Gaps = 104/812 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ V+EE+P IDG +IPVD +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI------------------ 102
PC HPE +P P E+ +F Y DR+ MVRPRK+L +A+
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVVAKGSYSLSFSFPTGTYS 120
Query: 103 -------------DGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF------EREG 143
DGVAPRAKMNQQRSRRFR+++DA AE+E+ + EF ++ G
Sbjct: 121 FCDMFGTNVGFFLDGVAPRAKMNQQRSRRFRSAQDAK---AEDEK-KVEFAKLLKKQKRG 176
Query: 144 RK---LPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANV 200
+K + + ++ +D+NVITPGT FM +L++AL+Y++ +L+ DPGWEK+KVI+SDA V
Sbjct: 177 KKDVTVAEEVITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATV 236
Query: 201 PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPG 259
PGEGEHKIM ++R QR P YDPNTRH +YGLDADLIML L THE HF +LRE V F
Sbjct: 237 PGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQES 296
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LCGQ GH+ C GKAK K GEFDEK + P KP+ +LH+ LREYL E +
Sbjct: 297 KARTCKLCGQAGHVEEACTGKAKEKRGEFDEK--QKGNPLKPFIWLHVSVLREYLAVEMQ 354
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+P PF +LE +DD++FMCFFVGNDFLPH+P+LEIRE I+ L+A+++ +GGYL
Sbjct: 355 VPQQPFPFNLERALDDWVFMCFFVGNDFLPHLPSLEIRENGIDTLIAIWRDNIPQMGGYL 414
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK-----------------RE 422
T + L + + +Q + ED IF++R + +R K R+
Sbjct: 415 TKDGRVDLAKAQLILQGLAKQEDAIFRRRRQTEERRNANAKRRQEEDRQRRNNNNEHARK 474
Query: 423 KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHK 482
K + RG EP+ LV + SR + + V + + ++ K
Sbjct: 475 KRRGSRG--AEPVPDIPPLVIPGKGELSRAERELTHAMVVNRGAVYKANMANKSAAAALK 532
Query: 483 VPRLSSG-ATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN-------- 533
LS G A +GA ++S + +K L + KSDAF + N
Sbjct: 533 AQLLSGGTAEVGADATNTQDSAPSGIPGSK---------LGKRKSDAFENSNTEAEAEEE 583
Query: 534 -------------PEEDK-----VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 575
P+ED+ V+L E G+ +RYYE+KF +P++ R V Y
Sbjct: 584 DEEEEETVEVPAKPKEDEMPPDTVRLWEDGYADRYYEQKFGV-SPKDI-AFRHKVARAYV 641
Query: 576 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 635
EGL WV+ YY++G SW W+YPYHYAPFA+D D+ + ++ F G PFKPF QL+GV P+
Sbjct: 642 EGLSWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIGEMDVQFTKGTPFKPFEQLMGVLPA 701
Query: 636 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 695
AS+HA+PE +R LM+D NS I DFYP DF VD+NGK+++WQG+A LPFIDE RLL + K
Sbjct: 702 ASNHAIPEVFRDLMSDENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDK 761
Query: 696 IEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
H L+EEE RN++ D+L + HPL S+
Sbjct: 762 RYHLLSEEEQARNAMGKDVLLLSEKHPLYESL 793
>gi|310796685|gb|EFQ32146.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1020
Score = 637 bits (1642), Expect = e-179, Method: Compositional matrix adjust.
Identities = 347/795 (43%), Positives = 465/795 (58%), Gaps = 54/795 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIEE+PV + DG +IPVDT PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMEDGSEIPVDTMGPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSD-----SQVFDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +++ + + FDSN ITPGT FM +L+ +L
Sbjct: 121 RSAQEAQEKEEDKQELLKLLKQQSGGIVSNDSLESVTKKAFDSNSITPGTPFMDILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W ++K+I+SDA VPGEGEHKIM++VR QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNFVRSQRISPDYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF + K C LCGQ GH A C G+AK K GEFDE+
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKAKMCKLCGQKGHEARACRGQAKEKVGEFDEQ-- 298
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
E KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVGNDFLPH+P
Sbjct: 299 EKGPALKPFIWLHVSILREYLAAELNVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L A++K +GGY+ L R + + + ED IF++R
Sbjct: 359 LEIRENGIDTLTAIWKDNLPVMGGYVVKDGHVDLGRAQLILNGLAKQEDSIFKRRKETED 418
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
R KR K Q R Q D+ + P+ VGR N
Sbjct: 419 RREANFKRRKLQEERNPRFAKPKQFDNAAAGLTL----FPAAGGPNGITHDMVVGRSSNM 474
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE---FKAKLKELL--RDKSDA 528
+ + + + + E S E D E E A K +L R DA
Sbjct: 475 NANTANKSAASAIRE--QLKDLMSKPEPSQEVDSGEKASEEAPSTADQKSVLGKRKAEDA 532
Query: 529 F-------------NSDNPEE----DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 571
N+ + E D V++ E G+ +RYYE+KF+ + E R V
Sbjct: 533 AIQADSTPASVTGPNTPSAAEEAAVDHVRMWEEGYADRYYEQKFHVDRNDH--EFRHKVA 590
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
Y EGL WV+ YY++G SW+W+YPYHYAPFA+D DLD+ ++ FE G KPF QL+
Sbjct: 591 RAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLDKMDVRFEKGRISKPFEQLMS 650
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P+AS ALPE + LM + +S + DFYPT+FE+D+NGK+ +WQG+A LPFI+ RLL
Sbjct: 651 VMPAASRSALPEVFHDLMLNEDSEVIDFYPTEFEIDLNGKKMAWQGVALLPFIEMPRLLA 710
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFVLLSH-----PLSASIYTLDEHCKQLKIKERVEVK 746
V+K L+ + RN + D+L + +H ++ S Y+ + LK
Sbjct: 711 AVEKKYPLLSAADQARNGVGRDVLLLSDAHHELYDEITTSFYSKKQGAPTLK-------- 762
Query: 747 ERLNPELSDGMNGYI 761
LNP SDG+ G +
Sbjct: 763 --LNPRTSDGLAGNV 775
>gi|380484893|emb|CCF39710.1| XRN 5'-3' exonuclease [Colletotrichum higginsianum]
Length = 1015
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 342/788 (43%), Positives = 461/788 (58%), Gaps = 40/788 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIEE+PV + DG +IPVDT+ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMEDGSEIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSD-----SQVFDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +++ + + FDSN ITPGT FM +L+ +L
Sbjct: 121 RSAQEAQEKEEDKQELLKLLKQQNGGVVSDDSLESVTKKAFDSNSITPGTPFMDILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W K+K+I+SDA VPGEGEHKIM++VR QR P +DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWAKLKIIISDATVPGEGEHKIMNFVRSQRISPDFDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K GEFDE+
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARMCKLCGQKGHEARACRGQAKEKVGEFDEQEK 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ + KP+ +LH+ LREYL E +P PF DLE +DD++FMC FVGNDFLPH+P
Sbjct: 301 NLAL--KPFIWLHVSILREYLAAELNVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L A++K +GGY+ L R + + + ED IF++R
Sbjct: 359 LEIRENGIDTLTAIWKDNLPFMGGYVVKDGHVDLGRAQLILNGLAKQEDAIFKRRKETED 418
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
R KR K Q R Q D+ + P+ VGR N
Sbjct: 419 RKEASFKRRKLQEERNPRFAKPKQVDNAAAGLTL----FPAAGGPNGITHDMVVGRSSNM 474
Query: 474 KGTSGRPH-------KVPRLSSGATIGAAIVEAENSFETDP----------QENKEEFKA 516
+ ++ L S G A E + P + EE A
Sbjct: 475 NANTANKSAASAIRDQLKGLMSKTEPGQAADAGEKANGEVPSTPDQKSVLGKRKAEEAAA 534
Query: 517 KLKELLRDKSDAFNSDNPEE---DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLR 573
+ + EE D V++ E G+ +RYYE+KF+ + E R V
Sbjct: 535 QAGSTPASATGPSTPSAAEEAAVDHVRMWEEGYADRYYEQKFHVDRSDH--EFRHKVARA 592
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y EGL WV+ YY++G SW+W+YPYHYAPFA+D DLD+ + FE G KPF QL+ V
Sbjct: 593 YVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLDKMEVQFEKGRISKPFEQLMSVM 652
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS ALPE + LM + +S + DFYPT+FE+D+NGK+ +WQG+A LPFI+ RLL V
Sbjct: 653 PAASRSALPEVFHDLMLNEDSEVIDFYPTEFEIDLNGKKMAWQGVALLPFIEMPRLLAAV 712
Query: 694 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPEL 753
+K L+ + RN + D+L + +H +Y DE K++ +LNP
Sbjct: 713 EKKYPLLSAADQARNGVGRDVLLLSDAH---HELY--DEITTGFYSKKQGAPTLKLNPRT 767
Query: 754 SDGMNGYI 761
SDG+ G +
Sbjct: 768 SDGLAGNV 775
>gi|391327300|ref|XP_003738141.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Metaseiulus
occidentalis]
Length = 960
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 357/762 (46%), Positives = 464/762 (60%), Gaps = 43/762 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-VKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ K+P ++ +EE +DG ++ +DTSKPNPN +E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKFPNIIVHCVEERGHTVDGNQRVNIDTSKPNPNNVEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE++PAP DE+ +F+YIDR+F ++RPR+LLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCCHPENKPAPKNEDEMMVAIFEYIDRIFSIIRPRRLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RASK+AA+ AA RLR+E + +G LPP K+ FD+N ITPGT FM L+ L YYI
Sbjct: 121 RASKEAAEKAATISRLRRELQSKGFHLPPEKAPEDHFDTNCITPGTPFMDRLAKCLHYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H RLNNDPGW+ I+VILSDANVPGEGEHKIM ++R QR P +DPNTRHCL G DADLIM
Sbjct: 181 HDRLNNDPGWQNIEVILSDANVPGEGEHKIMDFIRKQRASPSHDPNTRHCLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P Q C LCGQ GH +C G K A + K ++ +
Sbjct: 241 LGLATHEPNFTIIRE-EFKPNQPRPCELCGQIGHEMKDCMGLPKDIASQ--TKIEKPLGA 297
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + L+EYL E I PF+ +E +DD++F+CFFVGNDFLPH+P+LEIRE
Sbjct: 298 ETEFIFIRLNVLKEYLTKELWIEGLPFKWSIERAIDDWVFLCFFVGNDFLPHLPSLEIRE 357
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GAI+ L+ +YK+ YLT + + +G ED IF++R Q E+
Sbjct: 358 GAIDRLVRIYKETIHVKKDYLTKNGFAQMDHCAMILTKLGQAEDEIFRQR----QIDEEK 413
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
KR + L+ + VS + L Q +D +G G
Sbjct: 414 FKRRQKVGESRCTPLTLSSSGRIDSVSAWDSRLLTIDYRDEVLSQRRSA--MDFSRGLHG 471
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
P A++E E + P + K A + D ED+
Sbjct: 472 GPGI-----------EAMLEPEGGAQGQPAKRK----------------AEDLDEEPEDE 504
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E GWKERYYE KF E + R +V Y EGLCWV+HYYY+G SW+WF+PY
Sbjct: 505 VRLWEVGWKERYYESKFEVSP--ENQSFRHEVAAAYAEGLCWVLHYYYQGCASWKWFFPY 562
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD ++ ISFE PF P QL+ VFP+AS LPE + LM DP SPI
Sbjct: 563 HYAPFASDFSEIGTLKISFEKNTKPFNPMEQLMSVFPAASRQHLPEPWGDLMEDPESPII 622
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF +D+NGK+ +W G+A LPF+DE RLL+ V + LT EE RRNS +F+
Sbjct: 623 DFYPIDFRIDLNGKKAAWMGVALLPFVDEKRLLETVATVYDRLTPEEKRRNSRGDSYIFI 682
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNG 759
+HP + L E+ Q K+ + E + ++PE GM G
Sbjct: 683 RKNHPGYPFLRGLYENKSQRKLND--ENVQPIDPESFFGMAG 722
>gi|389640341|ref|XP_003717803.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
gi|351640356|gb|EHA48219.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
Length = 1020
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 353/793 (44%), Positives = 475/793 (59%), Gaps = 60/793 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE++PV + DG IPVD +KPNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPVEMEDGTSIPVDITKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+F MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCAHPEDRPAPQDEEEMMLEIFKYTDRVFNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPPKS----DSQVFDSNVITPGTEFMAVLSIAL 174
R++++A + A ++ L + +++ G + ++ + FD+N ITPGT FM +L+ +L
Sbjct: 121 RSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTPFMDILAGSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DPGW +K+I+SDA VPGEGEHKIM +VR QR+ P +DPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE V F G+ C LCGQ GH A C+G+ K+K GEFDEK +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGHDAQQCKGEVKKKEGEFDEKQN 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
P KP+ +LH+ LREYL+ E +P+ PF DLE VDD+IF+C FVGNDFLPH+P
Sbjct: 301 --AEPLKPFIWLHVAILREYLNVELYVPDLPFRFDLERAVDDWIFLCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I L +++K+ +GGY+T L RV++ + + ED IF+KR
Sbjct: 359 LEIRENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQYIMDGLAKQEDSIFRKRKEQED 418
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS--------- 464
R KR K Q R G+ A+GP S ++
Sbjct: 419 RRDANAKRRKMQDDRAK-----------------WGNNSANGPHVSEPAKAITHDMVVNR 461
Query: 465 ---ECVGRLDNGKGTSGRPHKVPRLSSGATIGAA----IVEAENSFETDPQENKEEFKAK 517
+ + N S ++ + S A +A + E S ET P + KA
Sbjct: 462 AAAQVDANVANKSAASMLKSQLKAMQSQAPEASAPETPVKEGAASEETTPASALGKRKAA 521
Query: 518 LKELLRDKSDAFNSDNPEE---------DKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
L E S A NS P D V+L E G+ +RYYE+KF+ + E R
Sbjct: 522 LME--DGDSPAPNSPTPGTPASGNGEAVDTVRLWEDGYTDRYYEQKFHVDP--KNVEFRH 577
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
V Y EGL WV+ YY++G SW+WFYPYHYAPFA D L ISFE G KP+ Q
Sbjct: 578 KVAHAYVEGLSWVLLYYFQGCPSWEWFYPYHYAPFAQDFVGLKDLEISFEKGRKSKPYEQ 637
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
L+ V P+AS LP + LMT +S I DFYP DFEVD+NGK+++WQG+A LPFI+ R
Sbjct: 638 LMSVLPAASRDNLPPIFHDLMTKEDSEIIDFYPEDFEVDLNGKKFAWQGVALLPFIEMDR 697
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 748
LL V+ L+ +EA RN + D+L + +H A +Y D+ K + +
Sbjct: 698 LLAAVQAKYPELSADEAARNGLGRDVLIISDAH---APLY--DDLITNFYSKRQTGSTYK 752
Query: 749 LNPELSDGMNGYI 761
L+ + SD + G +
Sbjct: 753 LDQKNSDLLAGVV 765
>gi|194760286|ref|XP_001962372.1| GF15434 [Drosophila ananassae]
gi|190616069|gb|EDV31593.1| GF15434 [Drosophila ananassae]
Length = 911
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 359/793 (45%), Positives = 463/793 (58%), Gaps = 69/793 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KYP V+ + E + V D G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDPDTGRNIYEDATLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +FD IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E RLR+E G KLPP K + FDSN ITPGT FM LS L YY+
Sbjct: 121 RAAKETTEKRLEIARLREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYV 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H RLNN+P W+ +KVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIM
Sbjct: 181 HDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C Q GH C G F K D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDICNQFGHEMEKCNGLGATTGANF--KPDVPIGA 297
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 298 EVKFIFVRLSVLREYLKQTLVMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 357
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R R Q+ R
Sbjct: 358 GAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKNRQRREQQFKAR 417
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
K + Q R D L Q S F + + +G P G + N K +
Sbjct: 418 DKARRRQ-ERNQDHRSLDQ-------SVFGANAVGAGNQP---------GNIGNYKEAAA 460
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
R SGA G E E + D+
Sbjct: 461 ALRLGKR--SGAQAGLEDDEEEEEEDN-------------------------------DE 487
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E G+K+RYYE KF+ + R V L+Y GLCWV+ YYY+G SW W++PY
Sbjct: 488 VRLWEDGFKDRYYESKFDVAPGN--LQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 545
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + LM++P+SPI
Sbjct: 546 HYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPEPWADLMSNPDSPII 605
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +RN + L++
Sbjct: 606 DFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTSEEVKRNKRGDNYLYI 665
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH-PPVFRSP 776
S P H K++K + N GM G ++ + RSP
Sbjct: 666 TNSSP----------HFKKVKRITEKSDDDECNAISFSGMRGTLAKSELNTAISGCLRSP 715
Query: 777 VASMEDIMGNQVL 789
++ + DI NQ++
Sbjct: 716 ISGLPDITDNQII 728
>gi|170058238|ref|XP_001864833.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877413|gb|EDS40796.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 884
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 353/792 (44%), Positives = 460/792 (58%), Gaps = 67/792 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + +E++ DG + D +KPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKNTDDDGNVLYDDMTKPNPNKVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+ IDRL +VRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPRNEDEMMVAIFECIDRLMNIVRPRQVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
ASK+AA+ A E ++R+E +G LPP+ + FDSN ITPGT FM LS LQYY+H
Sbjct: 121 ASKEAAEKATEIAKIREELAAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+NN+PGW+ +KVILSDANVPGEGEHKIM Y+R QR P +DPNT H L G DADLIML
Sbjct: 181 DRMNNNPGWKGLKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF+I+RE F P ++ C +C Q GH +C G K+ E+ +
Sbjct: 241 GLATHETHFTIIRE-EFLPNKERPCDICQQMGHEMKDCAG---LKSARDCERSPPPPGKE 296
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ + L+EYL E +PN PF D E ++DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 297 TQFIFVRLNVLKEYLAKELDMPNLPFTYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREN 356
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YKK GYLTD +L RVE + +G ED IF+ R R ER
Sbjct: 357 AIDRLVTLYKKCVYKTKGYLTDSGDVTLDRVELIMTDLGYAEDEIFRNRKVTEDRFKERN 416
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
KR K Q R + + H S+ A P
Sbjct: 417 KRMKMQKER----------EQRPKFDQMHNSQFAPTP----------------------- 443
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
L G T A + +P++ F+ + S+ N D+V
Sbjct: 444 ------LGRGQTPQAIV---------NPRQEAANFRMGGNNRNQQDSNQDNQQPETPDEV 488
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+K+RYYE KF+ + R+ V Y GLCWV+ YYY+G SW+W++PYH
Sbjct: 489 RLWEDGFKDRYYESKFDVLPTNMK--FRQTVAWEYVRGLCWVLKYYYQGCASWEWYFPYH 546
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAPFASD + L N F+ G PFKP QL+GVFP+AS +P + +LM DP SPI DF
Sbjct: 547 YAPFASDFRTLQNVNKHFDRGTPFKPLQQLMGVFPAASRSHVPPAFAELMVDPKSPIIDF 606
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP DF +D+NGK+++WQG+A LPF+DE RL LT+EE RN L++
Sbjct: 607 YPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPELTQEERLRNENGLARLYLCS 666
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVK-ERLNPELSDGMNGYISPCAGD-PHPPVFRSPV 777
+ L + EV ER P L+ M G I P + V SP+
Sbjct: 667 GSEAYRTARALYAN----------EVDYEREVPVLAGCMRGLIIPTLENIQQDGVLPSPI 716
Query: 778 ASMEDIMGNQVL 789
+ + N+VL
Sbjct: 717 PGLHPVCENKVL 728
>gi|336271881|ref|XP_003350698.1| hypothetical protein SMAC_02370 [Sordaria macrospora k-hell]
gi|380094860|emb|CCC07362.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 955
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 356/832 (42%), Positives = 482/832 (57%), Gaps = 69/832 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ V+E++P+ + DG IPVD +KPNPNG E+DNLYLDMNG
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVVEDQPITMPDGTVIPVDCTKPNPNGEEFDNLYLDMNG-- 58
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 59 --------PPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 110
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSD------SQVFDSNVITPGTEFMAVLSIA 173
RA+++A + ++++ + +++ + + + + FDSN ITPGT FM +L+ +
Sbjct: 111 RAAREAMEKEEDKQKFVELLKKQNGNMIQQEEPVETVVKKAFDSNSITPGTPFMDILAAS 170
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+ +LN DP W +KVI+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGLD
Sbjct: 171 LKYWCSYKLNTDPAWANMKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLD 230
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML LATHE HF +LRE VF + + C +CGQ GH A NC+G+AK K GEFDEK
Sbjct: 231 ADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEK- 289
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ V+P KP+ +LH+ LREYL E +P PF+ +LE +DD++FMCFFVGNDFLPH+P
Sbjct: 290 -DAVIPLKPFIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVGNDFLPHLP 348
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
LEIRE I+ L A++K +GGYLT + L RV++ + + ED IF++R
Sbjct: 349 ALEIRENGIDTLTAIWKDNLPVMGGYLTKDGQADLERVQYIMAGLAKQEDAIFRRRKEAE 408
Query: 413 QRHAERIKREK----AQARRGDDVEPLAQP--DSLVPVS-RFHGSRLASGPSPSPYQQSE 465
R KR K A+ RR + Q +S P FH G P P +
Sbjct: 409 DRREAGFKRRKLADEARQRRAQGSRQIRQAAENSGPPAGFSFHKINEFPGKVPQPSITHD 468
Query: 466 CV--------GRLDNGKGTSGRPHKVPRL----SSGATIGAAIVEAENSFETDPQENKEE 513
V + N S ++ L S GA E P+ E
Sbjct: 469 MVVNRQAVDQANVANKSAASVLKDQLKSLMAQGKSAPETGAESTETPADTAAAPEAAATE 528
Query: 514 --------FKAKLKELLRDKSDAFNSDNPE-----------EDKVKLGEPGWKERYYEEK 554
+ EL+ D + + + E D V+L E G+ +RYYE+K
Sbjct: 529 EQAAPPTALGKRKAELIEDAATGPEASSSEVTEVSENDAEPNDSVRLWEEGYADRYYEQK 588
Query: 555 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 614
F K + + R V Y EGL WV+ YY++G SW+WFYPYHYAPFA+D DL +
Sbjct: 589 F--KVDRKDIDFRHKVGRAYAEGLAWVLEYYFQGCPSWEWFYPYHYAPFAADFVDLGKME 646
Query: 615 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
I FE G +PF QL+ V P+AS HA+PE + LMT+ NS I DFYP +FE+D+NGK+ +
Sbjct: 647 IKFEKGRISRPFEQLMSVLPAASRHAIPEVFHPLMTEENSEIIDFYPEEFEIDLNGKKMA 706
Query: 675 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH- 733
WQG+A LPFID RLL ++ H L+ E+ RN+ D L + SHP TL EH
Sbjct: 707 WQGVALLPFIDMPRLLSAMETKTHLLSPEDQLRNTPGKDFLLLSDSHP------TLYEHI 760
Query: 734 CKQLKIKERVEVKERLNPELSDGMNGYISPCAG-DPHPP-VFRSPVASMEDI 783
Q K++ K L+P S G++G + G PH V+ ASM D+
Sbjct: 761 TSQFYSKKQGATKFELDPTKSAGLSGSVEKIDGYVPHGSLVYPLSRASMPDV 812
>gi|407922574|gb|EKG15671.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 1073
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 363/837 (43%), Positives = 481/837 (57%), Gaps = 95/837 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPA +RWL+ KYP +V+ V+E EPV DG PVDT+KPNPNG E+DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSTKYPKIVSSVVEAEPVEYPDGTVEPVDTTKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+ P +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDKDPPENEEEMMIEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDA----ADSAAEEERL-RQEFEREGRKLPPKSD--------SQVFDSNVITPGTEF 166
RA++DA AD+A + L Q+ R G + + +DSN ITPGT F
Sbjct: 121 RAAQDAKQKDADAAEFAKMLASQKKNRRGSGSDEDEEESAEAQIVKKTWDSNSITPGTPF 180
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
M +L+ +L+Y+ +LN DPGWEK+KVI+SDA VPGEGEHKIM +VR QR P +DPNTR
Sbjct: 181 MDILAKSLRYWCAYKLNTDPGWEKLKVIISDATVPGEGEHKIMEFVRSQRRSPFHDPNTR 240
Query: 227 HCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA 285
H +YGLDADLIML LATHE HF +LRE V F + C CGQ GH A C G+ K+K
Sbjct: 241 HVIYGLDADLIMLGLATHEPHFRVLREDVFFNDAKPRTCRRCGQTGHYADQCRGEMKKKE 300
Query: 286 GEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 345
E D K ++V KKP+ +LH+ LREYL E + N F DLE +DD++FMCFFVGN
Sbjct: 301 DEHDVKQNKVT--KKPFIWLHVSILREYLAAEMFVENQGFAFDLERALDDWVFMCFFVGN 358
Query: 346 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
DFLPH+P+LEIRE I+ L+ ++++ +GGY+T + R + ++ + ED IF
Sbjct: 359 DFLPHLPSLEIREQGIDTLINIWRENIPRMGGYVTKDGHVDMNRAQLILEGLAKLEDGIF 418
Query: 406 QKRARLHQRHAERIKREKAQARRGDDVEPLA------------QPDSLVPVSRFHGSR-- 451
++R R RE AQ RR E Q DS + G
Sbjct: 419 KRRKETEDR------REAAQKRRKQQEERRNGGGRGANGNGNQQHDSPTARKKRKGGETA 472
Query: 452 --LASGP--SPSPYQQSEC--------VGR--LDNGKGTSGRPHKVPRLSSG-------- 489
A+ P SP+ Q E V R + G+ + L G
Sbjct: 473 EDFANMPMFSPAELQSKEARSLTHENFVNRKAIFQGQVNTSNKSAAAALKEGLMAKKIES 532
Query: 490 ATIGAAIVEAENSFETDPQENKEE-------------FKAKLKELLRDKSDAFNSDNPEE 536
A+I A I + + E P + + K K + L D+S + P E
Sbjct: 533 ASIAAGI---DGAGEEAPAQESDAPTGDVTATPPSALGKRKAEILEEDESSTPGRNTPVE 589
Query: 537 DK------------VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
D V++ E G+ +RYYE+KF+ + E R V Y EGL WV+ Y
Sbjct: 590 DSPAAKPAEPPQDDVRMWEEGYADRYYEQKFHVDPKD--IEFRHQVARDYAEGLAWVLLY 647
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
Y++G SW W+YP+HYAPFA D DL + + FE G PF+P+ QL+GV P+AS+HA+PE
Sbjct: 648 YFQGCPSWTWYYPHHYAPFAQDFVDLGKMELKFEKGQPFRPYEQLMGVLPAASNHAIPEV 707
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+R LM + +S I DFYP DF VD+NGK+ +WQG+A LPFIDE RLL + L+ EE
Sbjct: 708 FRPLMEEQDSDIIDFYPEDFVVDLNGKKMAWQGVAILPFIDEKRLLKAMNTKYPLLSAEE 767
Query: 705 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
RN D+L HPL +E +Q K++ E K +LNP++S+G+ G +
Sbjct: 768 HARNEFGKDVLLFSTRHPL------YEEVAQQWYSKKQGEPKHKLNPQISEGLAGEV 818
>gi|195471641|ref|XP_002088111.1| GE14198 [Drosophila yakuba]
gi|194174212|gb|EDW87823.1| GE14198 [Drosophila yakuba]
Length = 897
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 353/791 (44%), Positives = 463/791 (58%), Gaps = 72/791 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KYP V+ + E + V D G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKKVDPDTGRNIYEDATLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +FD IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM LS L Y++
Sbjct: 121 RAAKETTEKRLEIARIREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H RLNN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIM
Sbjct: 181 HDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C GH C G K D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSASFKPDVPIGA 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 300 EVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 359
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA++ L+ +YKK GYLT +L RV+ + +G+ ED+IF+ R R ++ R
Sbjct: 360 GAVDRLVELYKKCVYKTKGYLTTSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKTR 419
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
K K Q R D HGS S
Sbjct: 420 DKCRKRQERNQD-----------------HGSLNQS------------------------ 438
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA-KLKELLRDKSDAFNSDNPEED 537
+ GA+ V NS + KEE A + ++ D+++ + D + D
Sbjct: 439 ------------SFGASAV-GPNSQQKSVGNYKEEAAALRNRKRTGDQANLDDDDEEDND 485
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+V+L E G+K+RYYE KF+ ++ R V L+Y GLCWV+ YYY+G SW W++P
Sbjct: 486 EVRLWEDGFKDRYYESKFDVAPGN--QQFRYAVALQYVRGLCWVLKYYYQGCSSWNWYFP 543
Query: 598 YHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
YHYAPFASD ++ + +FE G PF P QL+GVFP+ASS +PE + KLM+DP SPI
Sbjct: 544 YHYAPFASDFVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPI 603
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE RN + L+
Sbjct: 604 IDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVTRNKRGDNYLY 663
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH-PPVFRS 775
+ P H K++K + + + DGM G + + + +S
Sbjct: 664 ITNQSP----------HYKKVKKVSQKDDENVCKAISFDGMRGTLGQTKLNTAISGILKS 713
Query: 776 PVASMEDIMGN 786
P++ + DI N
Sbjct: 714 PISGLSDIHDN 724
>gi|194862714|ref|XP_001970086.1| GG10442 [Drosophila erecta]
gi|190661953|gb|EDV59145.1| GG10442 [Drosophila erecta]
Length = 902
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 356/800 (44%), Positives = 461/800 (57%), Gaps = 90/800 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KYP V+ + E + V D G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDTDTGRNIYEDATLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +FD IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM LS L Y++
Sbjct: 121 RAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H RLNN+P W+ IKVILSDANVPGEGEHKIM ++R QR P +DPNT+H L G DADLIM
Sbjct: 181 HDRLNNNPAWKGIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C GH C G + K D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTGANFKPDVPIGA 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 300 EVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 359
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R R ++ R
Sbjct: 360 GAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKAR 419
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGS--RLASGPSP-SPYQQSECVGRLDNGKG 475
K K Q R D HGS + A G S P Q VG
Sbjct: 420 DKARKRQERNQD-----------------HGSLNQSAFGASAVGPNSQQRSVG------- 455
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR--DKSDAFNSDN 533
N +E A L+ R D+++ +
Sbjct: 456 ----------------------------------NYKEEAAALRNRKRTIDQANLDEDEE 481
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
+ D+V+L E G+K+RYYE KF+ + ++ R V L+Y GLCWV+ YYY+G SW
Sbjct: 482 EDNDEVRLWEDGFKDRYYESKFDVASGN--QQFRYAVALQYVRGLCWVLKYYYQGCASWN 539
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W++PYHYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + KLM+DP
Sbjct: 540 WYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDP 599
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
SPI DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +RN
Sbjct: 600 ESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGD 659
Query: 713 DMLFVLLSHP-----LSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 767
+ L++ P S D CK + DGM G + +
Sbjct: 660 NYLYISNQSPHYKKVKKVSSKDDDSVCKAISF---------------DGMRGTLGKTELN 704
Query: 768 PH-PPVFRSPVASMEDIMGN 786
+ RSP++ + DI N
Sbjct: 705 TAISGILRSPISGLSDINDN 724
>gi|350537227|ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4 [Solanum lycopersicum]
Length = 978
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 297/424 (70%), Positives = 348/424 (82%), Gaps = 7/424 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA++YPL + D++EEEP +PVD SKPNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEP----KDDVPVDISKPNPNGMEFDNLYLDMNGIIH 56
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPE +PAP T+++VF +FDYID LF +VRPRKLLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 57 PCFHPEGKPAPATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRFR 116
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASKDAA+S AEE+RLR+EFE E L P + DSNVITPGT FMAVLSIALQYYIH
Sbjct: 117 ASKDAAESEAEEKRLREEFEMEAAILVPTEKPETSDSNVITPGTPFMAVLSIALQYYIHS 176
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN + GW KVILSDANVPGEGEHKIMSY+RLQRN+PG++PNTRHCLYGLDADLIML+
Sbjct: 177 RLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIMLS 236
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREV+ PGQQ+KCF CGQ GHLAA+C G G+ + ++ + KK
Sbjct: 237 LATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHG-TNGNHGKDGKAVNDTPIHKK 295
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
YQFLHIW LREYL Y+ I NPPF+ID E +VDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 296 KYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 355
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ--RHAER 418
INLLM++Y+++F +GGYLTD + L RVEHFIQA YED+IFQKRAR+ Q + ER
Sbjct: 356 INLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNER 415
Query: 419 IKRE 422
+++E
Sbjct: 416 VRKE 419
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/256 (57%), Positives = 181/256 (70%), Gaps = 2/256 (0%)
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
P EDKVKLGEPG+KERYY EKF T E+ E R+DVV +Y EGLCWV YYY+GVCSWQ
Sbjct: 427 PAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYMEGLCWVCRYYYQGVCSWQ 486
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK L I+F G PFKPF+QL+GV P+AS+ ALPE YR LM DP+
Sbjct: 487 WFYPYHYAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPAASAKALPEKYRMLMMDPS 546
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPISDFYPTDFE+DMNGKR++WQ + KLPFIDE +LL E KK+E TLT+ E RNS+M D
Sbjct: 547 SPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKKLEDTLTDTEQLRNSVMFD 606
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
+L+V H L+ I + H + I R + ++ LS GMNG+I +
Sbjct: 607 LLYVHHHHTLAPYIISYYHH--NVMIPSRAQRPWIIDANLSGGMNGFIWLSERNGLRDRV 664
Query: 774 RSPVASMEDIMGNQVL 789
SP+ +EDI+ N++L
Sbjct: 665 PSPLNGLEDILNNKIL 680
>gi|195438180|ref|XP_002067015.1| GK24252 [Drosophila willistoni]
gi|194163100|gb|EDW78001.1| GK24252 [Drosophila willistoni]
Length = 924
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 356/798 (44%), Positives = 474/798 (59%), Gaps = 67/798 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KYP V+ + E + + + G D++ PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKKLDPETGKNTYEDSTLPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +F+ IDRLF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + AE ER+R+E +G KLPP K + FDSN ITPGT FM LS L YY+
Sbjct: 121 RAAKETIEKRAEIERIREELMTKGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYV 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H RLNN+P W+ +KVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIM
Sbjct: 181 HDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG-KAKRKAGEFDEKGDEVVV 297
L LATHE +F+I+RE F P + C +C Q GH C G A + K D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDVCNQFGHEMDKCMGLNAIGSTSAANFKPDVPIG 299
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + F+ + LREYL +PN PF D E +DD++FMCFFVGNDFLPH+P+LEIR
Sbjct: 300 AEVKFIFVRLSVLREYLKKTLEMPNLPFAYDFERALDDWVFMCFFVGNDFLPHLPSLEIR 359
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
EGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R R ++ +
Sbjct: 360 EGAVDRLVELYKKCVYKTQGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKDRQRREKQFRD 419
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
R K++K R +D++ L Q S F + +G P + N K +
Sbjct: 420 REKKKKQWER--NDMKSLEQ-------SVFGPQAVGAGKGDGP-------TNIQNYKAEA 463
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
++ + SGA G A D D
Sbjct: 464 A-ALRLGQKRSGADAGL--------------------------------QAEEEDEDCND 490
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+V+L E G+K RYYE KF+ + + R V L+Y GLCWV+ YYY+G SW W++P
Sbjct: 491 EVRLWEDGFKNRYYESKFDVGP--DNLQFRYAVALQYVRGLCWVLKYYYQGCSSWNWYFP 548
Query: 598 YHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
YHYAPFASD ++ + FE G PF P QL+GVFP+ASS +P+ + +LM+ P SPI
Sbjct: 549 YHYAPFASDFVNIQGLSTLFEKGTKPFNPLEQLMGVFPAASSSHVPQPWVELMSSPTSPI 608
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +RN + L+
Sbjct: 609 IDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPFYEQLTSEEVKRNKRGNNYLY 668
Query: 717 VLLSHP---LSASIYTLDEHCKQLKIKERVEVKERLNPELS-DGMNGYISPCA-GDPHPP 771
+ P ++ IY +Q K E + E +S DGM G I+
Sbjct: 669 ISKESPHFKVANKIY------RQKKDDEVAQFDEEEGYPISLDGMRGTINRTELSTAINA 722
Query: 772 VFRSPVASMEDIMGNQVL 789
+ +SP+ + DI NQ+L
Sbjct: 723 ILQSPIGDLPDITDNQIL 740
>gi|195388580|ref|XP_002052957.1| GJ23613 [Drosophila virilis]
gi|194151043|gb|EDW66477.1| GJ23613 [Drosophila virilis]
Length = 774
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 354/797 (44%), Positives = 481/797 (60%), Gaps = 76/797 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL++KYP V+ + E + V ++ G I D++ PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPCVIIECNENKRVDVETGKTIFEDSTLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP +E+ +FD IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEEEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E ER+R E G KLPP K + FDSN ITPGT FM LS L YYI
Sbjct: 121 RAAKETIEKRLEIERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H RLNN+P W+ I+VILSDANVPGEGEHKIM Y+R QR P ++PNT H L G DADLIM
Sbjct: 181 HDRLNNNPAWKGIQVILSDANVPGEGEHKIMDYIRKQRAQPDHNPNTHHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C Q GH C G + +V +
Sbjct: 241 LGLATHEPNFTIIREE-FLPNKPRPCDICNQFGHEMDKCVGLGAAGTSNNNHFSPDVPIG 299
Query: 299 KK-PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + F+ + LREYL ++PN PF D E ++DD++FMCFFVGNDFLPH+P+LEIR
Sbjct: 300 AEVKFIFVRLSVLREYLKKTLQMPNLPFTYDFERVLDDWVFMCFFVGNDFLPHLPSLEIR 359
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
EGAI+ L+ +YKK GYLTD + +L RV+ + +G+ ED+IF+ R R Q++
Sbjct: 360 EGAIDRLVELYKKCVYKTKGYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQRREQQYKA 419
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
R Q R ++ + L + S F GP+P VG +N
Sbjct: 420 R------QQRDNNNSKALEE-------SVF-------GPAP--------VGPDNN----- 446
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
K+ +++ +++ A N + A L + +
Sbjct: 447 ----KIQTITNYKQAASSVRMASNG-----AAKRSSTTANLDDDDENND----------- 486
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+V+L E G+K RYYE KF+ P + + R V L+Y GLCWV+ YYY+G SW W++P
Sbjct: 487 EVRLWEEGFKNRYYESKFDV--PPDNLQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFP 544
Query: 598 YHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
YHYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + +LM+ P+S I
Sbjct: 545 YHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAQLMSRPDSTI 604
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF++D+NGK+++WQG+A LPF+DE RL + + LT+EE +RN + L+
Sbjct: 605 IDFYPDDFKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTDEEVKRNKRGENNLY 664
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELS-DGMNGYISPCAGDPHPPV--- 772
V P H K ++ + K +L+ +S +GM G IS D + +
Sbjct: 665 VSKFSP----------HFKTVQKLYQPAYKSQLDCPISFNGMCGTIS--ISDLNTALNDQ 712
Query: 773 FRSPVASMEDIMGNQVL 789
+SP+ + DI+ N+V+
Sbjct: 713 LKSPIPGLPDIIKNEVV 729
>gi|426240937|ref|XP_004014350.1| PREDICTED: 5'-3' exoribonuclease 2 [Ovis aries]
Length = 897
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 350/744 (47%), Positives = 460/744 (61%), Gaps = 56/744 (7%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L
Sbjct: 61 RSRRFRASKEGMEAAIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D
Sbjct: 181 DLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADS 239
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLSILREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR------ 408
EIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 300 EIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 409 -ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
R + +R+KR++ G + P A P GS++AS P + Y+
Sbjct: 360 FRRRQKEKRKRMKRDQPSFSPGGILTPHALGSRSSP-----GSQVASNPRQAAYEM---- 410
Query: 468 GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSD 527
R+ N S V SF +D + + +K + D
Sbjct: 411 -RMQNNLSPS-------------------VSPNTSFTSDGSPSP---RGGIKRKVEDS-- 445
Query: 528 AFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 587
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+
Sbjct: 446 --DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQ 501
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYR 646
G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +R
Sbjct: 502 GCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWR 561
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
KLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE R
Sbjct: 562 KLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETR 621
Query: 707 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG 766
RNS+ D+LFV HPL I L + E V+V PEL G+ G S
Sbjct: 622 RNSLGGDVLFVGKHHPLHDFILEL----YKTGSTESVDVP----PELCHGIQGKFSLDEE 673
Query: 767 DPHP-PVFRSPVASMEDIMGNQVL 789
P V SP+ ++D+ N V+
Sbjct: 674 AVLPDQVVCSPIPVLKDLTHNAVI 697
>gi|194380934|dbj|BAG64035.1| unnamed protein product [Homo sapiens]
Length = 896
Score = 627 bits (1616), Expect = e-176, Method: Compositional matrix adjust.
Identities = 349/742 (47%), Positives = 456/742 (61%), Gaps = 52/742 (7%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D
Sbjct: 181 DLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
EIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 300 EIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGR 469
R K ++ + +R +P P ++ GS++AS P + Y+ R
Sbjct: 360 FRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----R 411
Query: 470 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 529
+ N S P+ SF +D + L + R D+
Sbjct: 412 MQNNSSPSISPN-------------------TSFTSDGS------PSPLGGIKRKAEDSD 446
Query: 530 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 589
+ P ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 447 SEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGC 503
Query: 590 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 648
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKL
Sbjct: 504 ASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKL 563
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
M+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRN
Sbjct: 564 MSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRN 623
Query: 709 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 768
S+ D+LFV HPL I L Q E VEV PEL G+ G S
Sbjct: 624 SLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLDEEAI 675
Query: 769 HP-PVFRSPVASMEDIMGNQVL 789
P + SPV + D+ N V+
Sbjct: 676 LPDQIVCSPVPMLRDLTQNTVV 697
>gi|195107132|ref|XP_001998170.1| GI23821 [Drosophila mojavensis]
gi|193914764|gb|EDW13631.1| GI23821 [Drosophila mojavensis]
Length = 793
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 347/796 (43%), Positives = 479/796 (60%), Gaps = 80/796 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL++KYP V+ + E + + G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPCVIIECNENKKTDAETGKTIYEDPTLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP +E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEEEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E ER+R E G KLPP K + FDSN ITPGT FM LS L YYI
Sbjct: 121 RAAKETIEKRIEIERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H R+N +P W++I+VILSDANVPGEGEHKIM Y+R QR P +DPNT H L G DADLIM
Sbjct: 181 HHRINTNPAWKRIQVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C Q GH C G + + + D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSSNCNFTPDIPIGA 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL ++PN PF D E ++DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 300 EVKFIFVRLSVLREYLKKTLQMPNLPFSYDFERVLDDWVFMCFFVGNDFLPHLPSLEIRE 359
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA++ L+ +YKK GYLTD + +L RV+ + +G+ ED+IF+ R R Q+ R
Sbjct: 360 GAVDRLVELYKKCVYKTKGYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQRREQQFKAR 419
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
KRE + + + + P ++ P ++ +++ + Y+Q R+ +
Sbjct: 420 QKRENNNFKALE--QSVFGPSAVGPAAK---AQIITN-----YKQEAASVRMGSK----- 464
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
R S+ A++ D +EN D+
Sbjct: 465 ------RSSTAASLD------------DDEEN-------------------------HDE 481
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E G+K RYYE KF+ +P+ + R V L+Y GLCWV+ YYY+G SW W++PY
Sbjct: 482 VRLWEDGFKNRYYESKFDV-SPDNL-QFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 539
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD ++ + FE G PF P QL+GVFP+ASS +P+ + +LM+ P+S I
Sbjct: 540 HYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPKPWAELMSKPDSTII 599
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF++D+NGK+++WQG+A LPF+DE RL + + LTEEE +RN + L++
Sbjct: 600 DFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTEEEVKRNKKGENNLYI 659
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELS---DGMNGYISPCAGDPHPPVF- 773
P + +K+ + E+ +LS +GM G IS + F
Sbjct: 660 SKFSPHYET------------VKKLYQKAEKSPNDLSISFNGMGGTISISEINTAINGFM 707
Query: 774 RSPVASMEDIMGNQVL 789
+SP+ + DI+ N+V+
Sbjct: 708 KSPIPGLPDIIKNEVI 723
>gi|332238206|ref|XP_003268294.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Nomascus leucogenys]
Length = 896
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 348/743 (46%), Positives = 456/743 (61%), Gaps = 54/743 (7%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D
Sbjct: 181 DLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
EIRE AI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 300 EIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGR 469
R K ++ + +R +P P ++ GS++AS P + Y+ R
Sbjct: 360 FRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----R 411
Query: 470 LDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 528
+ N S P+ S + IG +AE+S
Sbjct: 412 MQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS-------------------------- 445
Query: 529 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 588
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 446 -DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQG 502
Query: 589 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 647
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RK
Sbjct: 503 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 562
Query: 648 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 707
LM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RR
Sbjct: 563 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 622
Query: 708 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 767
NS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 623 NSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGRFSLDEEA 674
Query: 768 PHP-PVFRSPVASMEDIMGNQVL 789
P + SPV + D+ N V+
Sbjct: 675 ILPDQIVCSPVPMLRDLTQNTVV 697
>gi|296200318|ref|XP_002747535.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Callithrix jacchus]
Length = 896
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 350/743 (47%), Positives = 454/743 (61%), Gaps = 54/743 (7%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D
Sbjct: 181 DLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
EIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 300 EIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY-----QQSECVGR 469
R K ++ + +R QP + P L S SPS +Q+ R
Sbjct: 360 FRRRQKEKRKRMKRD-------QP-AFTPTGILTPHALGSRNSPSSQVANNPRQAAYEMR 411
Query: 470 LDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 528
+ N S P+ S + IG +AE+S
Sbjct: 412 MQNNSSPSVSPNTSFTSDGSPSPIGGIKRKAEDS-------------------------- 445
Query: 529 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 588
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G
Sbjct: 446 -DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQG 502
Query: 589 VCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRK 647
SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RK
Sbjct: 503 CASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRK 562
Query: 648 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 707
LM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RR
Sbjct: 563 LMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRR 622
Query: 708 NSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD 767
NS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 623 NSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEA 674
Query: 768 PHP-PVFRSPVASMEDIMGNQVL 789
P + SPV + D+ N V+
Sbjct: 675 ILPDQIVCSPVPMLRDLTQNTVV 697
>gi|167861118|gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycopersicum]
Length = 696
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 296/424 (69%), Positives = 347/424 (81%), Gaps = 7/424 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA++YPL + D++EEEP +PVD SKPNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEP----KDDVPVDISKPNPNGMEFDNLYLDMNGIIH 56
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPE +PAP T+++VF +FDYID LF +VRPRKLLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 57 PCFHPEGKPAPATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRFR 116
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASKDAA+S AEE+RLR+EFE E L P + DSNVITPGT FMAVLSIALQY IH
Sbjct: 117 ASKDAAESEAEEKRLREEFEMEAAILVPTEKPETSDSNVITPGTPFMAVLSIALQYNIHS 176
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN + GW KVILSDANVPGEGEHKIMSY+RLQRN+PG++PNTRHCLYGLDADLIML+
Sbjct: 177 RLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIMLS 236
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREV+ PGQQ+KCF CGQ GHLAA+C G G+ + ++ + KK
Sbjct: 237 LATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHG-TNGNHGKDGKAVNDTPIHKK 295
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
YQFLHIW LREYL Y+ I NPPF+ID E +VDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 296 KYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 355
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ--RHAER 418
INLLM++Y+++F +GGYLTD + L RVEHFIQA YED+IFQKRAR+ Q + ER
Sbjct: 356 INLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNER 415
Query: 419 IKRE 422
+++E
Sbjct: 416 VRKE 419
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/256 (57%), Positives = 181/256 (70%), Gaps = 2/256 (0%)
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
P EDKVKLGEPG+KERYY EKF T E+ E R+DVV +Y EGLCWV YYY+GVCSWQ
Sbjct: 427 PAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYMEGLCWVCRYYYQGVCSWQ 486
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK L I+F G PFKPF+QL+GV P+AS+ ALPE YR LM DP+
Sbjct: 487 WFYPYHYAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPAASAKALPEKYRMLMMDPS 546
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPISDFYPTDFE+DMNGKR++WQ + KLPFIDE +LL E KK+E TLT+ E RNS+M D
Sbjct: 547 SPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKKLEDTLTDTEQLRNSVMFD 606
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
+L+V H L+ I + H + I R + ++ LS GMNG+I +
Sbjct: 607 LLYVHHHHTLAPYIISYYHH--NVMIPSRAQRPWIIDANLSGGMNGFIWLSERNGLRDRV 664
Query: 774 RSPVASMEDIMGNQVL 789
SP+ +EDI+ N++L
Sbjct: 665 PSPLNGLEDILNNKIL 680
>gi|320584179|gb|EFW98390.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 967
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 329/750 (43%), Positives = 457/750 (60%), Gaps = 58/750 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEEEP+V+ V+ PV S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEEEPIVVGDVEQPVQYSNPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T E+ +F Y DR+ M RPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPPPETEAEMMVEIFRYTDRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLP-PKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DAA + E ER QE E G ++ + +DSN ITPGT FM +L+ +L+Y++
Sbjct: 120 SARDAALAQEELERQIQEREMRGEEIDLAIKGKKSWDSNSITPGTPFMDILARSLRYWVA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L NDPGW ++VI+SDA VPGEGEHKIM+++R QR+ P Y+PNT HC+YGLDADLI L
Sbjct: 180 YKLANDPGWASLQVIISDATVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQ-QDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
LATHE HF +LRE VF Q Q + L Q N + +++ D+K
Sbjct: 240 GLATHEPHFKVLREDVFAKDQAQRQLKLADQ-----VNMDEATRQRLLAADQK------- 287
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KP+ +LH+ LREYL+ E IP F DLE +DD++FMCFFVGNDFLPH+P+L++R+
Sbjct: 288 -KPFLWLHVSILREYLEVELNIPRLSFNFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRD 346
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ------------ 406
I++L+ ++K+ ++ YLT K +L VE + + ED IF+
Sbjct: 347 NGIDILVDIWKRVLPSMKDYLTCDGKLNLEGVETLMSHLAQKEDEIFRKRYEGERRREEN 406
Query: 407 -KRARLHQRHAERIKREKAQA-RRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ-- 462
KR +L + +K + + +G + P+ +P + L +G + +
Sbjct: 407 DKRRKLEREQTNAVKNQLLKTVTKGKEKAPI------MPTQNMTLTSLTTGETAGGLKMT 460
Query: 463 QSECVGRLDNGKGTSGRPHKVPRL-------SSGATIGAAIVEAENSFETDPQENKEEFK 515
SE V ++ + V + ++ A A+ V E + QE
Sbjct: 461 NSEIVQNINTISKANAANKNVADILKKALFNNTEANGNASAVSVVKEAEIEEQE-----P 515
Query: 516 AKLKELLRDKSDAFNSDNPEED--------KVKLGEPGWKERYYEEKFNAKTPEEREETR 567
+ E R S AFNSD+ + D ++L EPG+K RYY++KF EE E+ R
Sbjct: 516 IDVSEKKRSASAAFNSDSEQSDAEVIDTTDSIRLWEPGYKTRYYQQKFETTDAEEIEKIR 575
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
KD+V Y EG+ W + YY++G SW W+YPYHYAPFA+D +L + F+ G PF+PF
Sbjct: 576 KDMVRCYVEGISWALLYYFQGCPSWNWYYPYHYAPFAADFTNLSDIKVEFKQGTPFRPFE 635
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+ V P+AS H LPE +R LM++P+S I DFYPTDF++DMNG + +WQGI LPFIDE
Sbjct: 636 QLMSVLPAASGHNLPEVFRPLMSEPHSEIIDFYPTDFKIDMNGAKMAWQGICLLPFIDET 695
Query: 688 RLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLL V++ LTE E RN+ ++LF+
Sbjct: 696 RLLKTVREKYSELTEYEIERNTNRNEVLFL 725
>gi|20129299|ref|NP_609082.1| Rat1, isoform A [Drosophila melanogaster]
gi|442626452|ref|NP_001260166.1| Rat1, isoform B [Drosophila melanogaster]
gi|74869864|sp|Q9VM71.2|XRN2_DROME RecName: Full=5'-3' exoribonuclease 2 homolog; AltName:
Full=Ribonucleic acid-trafficking protein 1; Short=dRAT1
gi|10728625|gb|AAF52452.2| Rat1, isoform A [Drosophila melanogaster]
gi|219990665|gb|ACL68706.1| FI04660p [Drosophila melanogaster]
gi|440213467|gb|AGB92702.1| Rat1, isoform B [Drosophila melanogaster]
Length = 908
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 355/795 (44%), Positives = 456/795 (57%), Gaps = 79/795 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KYP V+ + E + V D G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDPTLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM LS L Y++
Sbjct: 121 RAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H R NN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIM
Sbjct: 181 HDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C GH C G + K D +
Sbjct: 241 LGLATHEPNFTIIREE-FLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGA 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 300 EVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 359
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R R ++ R
Sbjct: 360 GAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKAR 419
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSG 478
K K Q R D L Q S F S A GP+ Q VG N K +
Sbjct: 420 DKARKRQ-ERNQDHGSLNQ-------SAFGAS--AVGPN----SQQRSVG---NYKEEAA 462
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
R S A + E N +
Sbjct: 463 ALRNRKRTSDMANLDDEDEEENND-----------------------------------E 487
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E G+K+RYYE KF+ + + R V L+Y GLCWV+ YYY+G SW W++PY
Sbjct: 488 VRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 545
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + KLM+DP SPI
Sbjct: 546 HYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPII 605
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +RN + L++
Sbjct: 606 DFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYI 665
Query: 718 LLSHPLSASIYTLDEH-----CKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH-PP 771
P + + E CK + DGM G + +
Sbjct: 666 SNQSPHYKKVKKISEKDDESVCKAISF---------------DGMRGTLGKTELNTAISG 710
Query: 772 VFRSPVASMEDIMGN 786
V +SP++ + DI N
Sbjct: 711 VLKSPISGLSDINDN 725
>gi|440466364|gb|ELQ35636.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae Y34]
gi|440487857|gb|ELQ67622.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae P131]
Length = 1041
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 353/814 (43%), Positives = 475/814 (58%), Gaps = 81/814 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE++PV + DG IPVD +KPNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPVEMEDGTSIPVDITKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI----------------- 102
HPC HPEDRPAP +E+ +F Y DR+F MVRPRK+L +A+
Sbjct: 61 HPCAHPEDRPAPQDEEEMMLEIFKYTDRVFNMVRPRKVLMIAVGKDSKHYPKCELYINPI 120
Query: 103 ----DGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFERE-GRKLPPKS----DSQ 153
DGVAPRAKMNQQRSRRFR++++A + A ++ L + +++ G + ++ +
Sbjct: 121 QPLLDGVAPRAKMNQQRSRRFRSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKK 180
Query: 154 VFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVR 213
FD+N ITPGT FM +L+ +L+Y+ +LN DPGW +K+I+SDA VPGEGEHKIM +VR
Sbjct: 181 AFDTNSITPGTPFMDILAGSLRYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVR 240
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGH 272
QR+ P +DPNTRH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH
Sbjct: 241 SQRSSPDHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGH 300
Query: 273 LAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECI 332
A C+G+ K+K GEFDEK + P KP+ +LH+ LREYL+ E +P+ PF DLE
Sbjct: 301 DAQQCKGEVKKKEGEFDEKQN--AEPLKPFIWLHVAILREYLNVELYVPDLPFRFDLERA 358
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 392
VDD+IF+C FVGNDFLPH+P LEIRE I L +++K+ +GGY+T L RV++
Sbjct: 359 VDDWIFLCCFVGNDFLPHLPALEIRENGIITLTSIWKQNLPRMGGYVTKDGHIDLERVQY 418
Query: 393 FIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRL 452
+ + ED IF+KR R KR K Q R G+
Sbjct: 419 IMDGLAKQEDSIFRKRKEQEDRRDANAKRRKMQDDRAK-----------------WGNNS 461
Query: 453 ASGPSPSPYQQS------------ECVGRLDNGKGTSGRPHKVPRLSSGATIGAA----I 496
A+GP S ++ + + N S ++ + S A +A +
Sbjct: 462 ANGPHVSEPAKAITHDMVVNRAAAQVDANVANKSAASMLKSQLKAMQSQAPEASAPETPV 521
Query: 497 VEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE---------DKVKLGEPGWK 547
E S ET P + KA L E S A NS P D V+L E G+
Sbjct: 522 KEGAASEETTPASALGKRKAALME--DGDSPAPNSPTPGTPASGNGEAVDTVRLWEDGYT 579
Query: 548 ERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 607
+RYYE+KF+ + E R V Y EGL WV+ YY++G SW+WFYPYHYAPFA D
Sbjct: 580 DRYYEQKFHVDP--KNVEFRHKVAHAYVEGLSWVLLYYFQGCPSWEWFYPYHYAPFAQDF 637
Query: 608 KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 667
L ISFE G KP+ QL+ V P+AS LP + LMT +S I DFYP DFEVD
Sbjct: 638 VGLKDLEISFEKGRKSKPYEQLMSVLPAASRDNLPPIFHDLMTKEDSEIIDFYPEDFEVD 697
Query: 668 MNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
+NGK+++WQG+A LPFI+ RLL V+ L+ +EA RN + D+L + +H A +
Sbjct: 698 LNGKKFAWQGVALLPFIEMDRLLAAVQAKYPELSADEAARNGLGRDVLIISDAH---APL 754
Query: 728 YTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
Y D+ K + +L+ + SD + G +
Sbjct: 755 Y--DDLITNFYSKRQTGSTYKLDQKNSDLLAGVV 786
>gi|378727060|gb|EHY53519.1| 5'-3' exoribonculease Dhp1 [Exophiala dermatitidis NIH/UT8656]
Length = 1075
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 343/816 (42%), Positives = 474/816 (58%), Gaps = 67/816 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL +KYP +++ V+EE+P IDGV+ PVDT+KPNPNG E NLYLD NGI+H
Sbjct: 1 MGVPALFRWLTKKYPKIISPVVEEQPYEIDGVQYPVDTTKPNPNGEEMHNLYLDFNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ---RSR 117
PC HPE++P P E+ +F Y DR+ MVRPR+LL +AIDGVAPRAKMNQQ R R
Sbjct: 61 PCSHPENKPPPANESEMMMEIFKYTDRVVNMVRPRRLLMIAIDGVAPRAKMNQQRARRFR 120
Query: 118 RFRASKDAADSAAEEERL--RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
R +K+A + AE + L +Q+ +R+ + + +DSNVITPGT FM +L+ +++
Sbjct: 121 AARDAKEADEKKAEFQTLLRQQQQDRDDVSDEEEVIKKTWDSNVITPGTPFMFILAQSIR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP W ++KVI+SDA+VPGEGEHKIM ++R QR+ P YDPNTRH +YGLDAD
Sbjct: 181 YWVQWKLNTDPAWAELKVIISDASVPGEGEHKIMQFIRSQRSDPEYDPNTRHVMYGLDAD 240
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML +ATHE HF +LRE VFT + K C LCGQ GH A NC G AK KAGEFDEKG
Sbjct: 241 LIMLGIATHEPHFRVLREDVFTRDAKAKTCKLCGQQGHYAENCRGNAKVKAGEFDEKGTT 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 EEL--KPFIWLHVPVLREYLAAEMFVPGQPFRFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+I E I+ L+A+++ +GGY+T +L R + +Q + ED IF++R + R
Sbjct: 359 DIHEDGIDKLIAIWRDNLPLMGGYVTCDGNVNLARAQIILQGLAKQEDAIFKRRKEVADR 418
Query: 415 HAE------------------RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGP 456
+ +R RG V+ A PV F + +
Sbjct: 419 RERNERRREQQQEAREAQRNPKRRRNSPDYNRGGRVDTRA---PTGPVETFEATNYPTLD 475
Query: 457 SPSPYQQSECVGRLDNGKGTSG---------RPHKVPRLSSGATIGAAIVEAENSFETDP 507
S + L K + R + A A+ S TD
Sbjct: 476 YNSIVNRGAVDKALTTNKSAAAVLKEQMLAQRAAATETPTKTAATNGTANGADGSPNTDS 535
Query: 508 QENKEEFKAKLKELLRDKSDAFNSD--------------------NPEEDKVKLGEPGWK 547
+ L+ ++ A +S +P+ D V+L EPG+
Sbjct: 536 NTPGSALGKRKAALMEEQDAASDSGTPGRNTPLTKTDTNEEPPPVDPDLDTVRLWEPGYA 595
Query: 548 ERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 607
+RYYE+KF+ +P + E R V Y EGLCWV+ YY++G SW W+YPYHYAPFA+D
Sbjct: 596 DRYYEQKFHV-SPNDI-EFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADF 653
Query: 608 KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 667
D+D+ + F+ G PF+P+ QL+GV P++S+HA+P + LMTD +S I DFYP DF++D
Sbjct: 654 VDIDKMEVKFDKGTPFRPYEQLMGVLPASSNHAIPPAFHPLMTDEDSEIVDFYPEDFDLD 713
Query: 668 MNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
+NGK+ SW+ + LPFIDE RLL + L+++E RN D L + +PL
Sbjct: 714 LNGKKQSWKAVVLLPFIDEKRLLKAMGTKYPLLSDDERARNEFGKDALIISDQNPL---- 769
Query: 728 YTLDEHCKQLKIKERVEVKERLNPELSDG-MNGYIS 762
DE Q K+ + KE + + G + G +S
Sbjct: 770 --YDELALQFYSKKAKDGKETVKLSMRKGRLAGTVS 803
>gi|157138197|ref|XP_001664171.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108880656|gb|EAT44881.1| AAEL003800-PA [Aedes aegypti]
Length = 958
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 359/796 (45%), Positives = 474/796 (59%), Gaps = 55/796 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + +E++ G + D ++PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKQTDEHGNPLYDDMTQPNPNKVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+ IDRL +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
ASK+AA+ AAE +++R E +G LPP+ + FDSN ITPGT FM LS LQYY+H
Sbjct: 121 ASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+NN+PGW+ +K+ILSDANVPGEGEHKIM Y+R QR P +DPNT H L G DADLIML
Sbjct: 181 DRMNNNPGWKGLKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF+I+RE F P ++ C +C GH +C G + D P
Sbjct: 241 GLATHETHFTIIRE-EFLPNKERPCDICQIMGHEMKDCTG--------LQSERDINRTPP 291
Query: 300 KP-----YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P Y F+ + L+EYL E +PN PF+ D E ++DD++FMCFFVGNDFLPH+P+L
Sbjct: 292 PPGAETQYIFVRLNVLKEYLAKELDMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSL 351
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
EIRE AI+ L+ +YKK GYLTD ++ RVE + +G ED IF++R R
Sbjct: 352 EIRENAIDRLVTLYKKCVYKTKGYLTDSGSVTVDRVELIMTDLGYAEDEIFRQRKVTEDR 411
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
ER KR K Q R +P+ + + S+ A P+P G+
Sbjct: 412 FKERNKRMKLQKEREQ------RPN----FEQMNKSQFA----PTPL-----------GR 446
Query: 475 GTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
G + + + PR + + ++ +N+ K K E L + A +
Sbjct: 447 GITPQAIQNPRQEAAHFRMFGNSSNQQQSNSNNDQNRRGQKRKADEPL---TPAAVEEAE 503
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
D+V+L E G+K+RYYE KF+ + + R+ V Y GLCWV+ YYY+G SW+W
Sbjct: 504 TPDEVRLWEDGFKDRYYESKFDVAP--QNMKFRQTVAWEYVRGLCWVLKYYYQGCASWEW 561
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
++PYHYAPFASD K L N F+ G PFKP QL+GVFP+AS + +P + +LM DP S
Sbjct: 562 YFPYHYAPFASDFKGLSNVNTHFDRGTPFKPLQQLMGVFPAASRNHVPPAFAELMVDPKS 621
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYP DF +D+NGK+++WQG+A LPF+DE RL +LT EE RN +
Sbjct: 622 PIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPSLTHEERLRNE---NG 678
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGD-PHPPVF 773
L L P Y L + + EV P L D M G + P + H V
Sbjct: 679 LARLYLSP-GPDAYKLVKGLYNGSVDYEREV-----PILVDCMRGIVIPTKENVTHDGVL 732
Query: 774 RSPVASMEDIMGNQVL 789
SP+ + + N+VL
Sbjct: 733 PSPIPGLHPVCENKVL 748
>gi|338719278|ref|XP_003363975.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Equus caballus]
gi|338719280|ref|XP_003363976.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Equus caballus]
Length = 896
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 335/685 (48%), Positives = 436/685 (63%), Gaps = 49/685 (7%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RSRRFRASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCL 120
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+YYI RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DA
Sbjct: 121 RYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADA 180
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLIML LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D
Sbjct: 181 DLIMLGLATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+L
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR------ 408
EIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 300 EIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDS 359
Query: 409 -ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
R + +R+KR++ G + P A P GS++AS P + Y+
Sbjct: 360 FRRRQKEKRKRMKRDQPAFTPGGILTPHALGSRNSP-----GSQVASNPRQAAYEM---- 410
Query: 468 GRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 526
R+ N S P+ S + IG +AE+S
Sbjct: 411 -RMQNNSSPSVSPNASFTSDGSPSPIGGIKRKAEDS------------------------ 445
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
+S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY
Sbjct: 446 ---DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYY 500
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHY 645
+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +
Sbjct: 501 QGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSW 560
Query: 646 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 705
RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 561 RKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 620
Query: 706 RRNSIMADMLFVLLSHPLSASIYTL 730
RRNS+ D+LFV HPL I L
Sbjct: 621 RRNSLGGDVLFVGKHHPLHDFIVEL 645
>gi|312089591|ref|XP_003146304.1| hypothetical protein LOAG_10732 [Loa loa]
Length = 686
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 345/739 (46%), Positives = 443/739 (59%), Gaps = 68/739 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL KYP V+ D +EE+P ++GV+IPV+T PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVIVDAVEEKPRDMNGVRIPVNTVDPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP+P T +E+F +F+YIDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPSPKTEEEMFTLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+A + + R E EG L ++AL+YY+H
Sbjct: 121 ASKEAIEKVEQIAETRSRLESEGYPL------------------------AVALRYYVHQ 156
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN+DPGWEK+ VILSDANVPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 157 RLNSDPGWEKVAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLG 216
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P QQ C LCGQ GH +C+G A E + +
Sbjct: 217 LATHEPNFNIIREE-FMPNQQRPCDLCGQYGHDLNDCKGLALDDDSECQSSP---LQKET 272
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E IPN DLE +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 273 NFIFVRLPVLREYLERELHIPNSSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENA 332
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK + G+LTD + R + + +G ED IF+ R Q+ + K
Sbjct: 333 IDRLVKLYKDMVYEMKGHLTDSGVVHIERAQIILNKLGEVEDEIFKSRQEREQQFKRKNK 392
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+K + + L P + F + +GP C+ G++ R
Sbjct: 393 EKKRRE------KALMTPSYISSRGSFLAPQ-TNGPI--------CLS------GSNTR- 430
Query: 481 HKVPRLSSGATIGAAIVEAENSFET--DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
A + +EA + ET P + E EL D S S++ D+
Sbjct: 431 ---------AMARTSRLEALDFIETLHVPGISVSENSCHRHELKDDSS----SEDEVFDE 477
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E GWK+RYY+ KF + R+ V L Y EGLCWV+HYYY+G SW W+YP+
Sbjct: 478 VRLWEDGWKDRYYKSKFQVDGKDIV--FRRKVALAYVEGLCWVLHYYYQGCASWDWYYPF 535
Query: 599 HYAPFASDLKDLDQFNISFE-LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD + QF F PFKP QL+ VFP+AS LPE +++LM P SPI
Sbjct: 536 HYAPFASDFDAVSQFKPDFSACTEPFKPLQQLMSVFPAASRVHLPEAWQELMISPTSPII 595
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP +F +D+NGK+ +WQG+A LPF+DE RLL+ +K +E L E RNS D LFV
Sbjct: 596 DFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKERNSRGPDRLFV 655
Query: 718 LLSHPLSASIYTLDEHCKQ 736
SHP L E+ K+
Sbjct: 656 GPSHPFYKFAEELYENSKE 674
>gi|325186843|emb|CCA21388.1| 5'3' exoribonuclease putative [Albugo laibachii Nc14]
Length = 1023
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 330/715 (46%), Positives = 443/715 (61%), Gaps = 56/715 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKI--PVDTSKPNPNGLEYDNLYLDMNGI 58
MGVPAFYRW+ KYP V D E+ V+I+G + ++ + PNPN LE NLY+DMNG+
Sbjct: 8 MGVPAFYRWVLAKYPKCVVDCKEQNAVMIEGKRHYELLNITGPNPNELEVANLYIDMNGL 67
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPE+ P T +E++Q + +Y+DRL VRPR++LY+AIDGVAPRAKMNQQR+RR
Sbjct: 68 IHPCAHPENGEQPKTEEEMYQRVMEYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQRARR 127
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A + E+ + + G ++ + S+ +DSNVITPGT+FM+ LS L++YI
Sbjct: 128 FRSAKEAEERGEIEKEAIEYMKAMGHQVQEQDQSKNWDSNVITPGTKFMSKLSKYLRFYI 187
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
R+N + W+ IKVI SDA+VPGEGEHK+MS++RLQR+ PGYDPN H L+GLDADLIM
Sbjct: 188 RERINQNEAWKSIKVIFSDASVPGEGEHKLMSFIRLQRSQPGYDPNQHHVLHGLDADLIM 247
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAAN-CEGKAKRKAGEFDEKGDEVV- 296
L LATHEV+FSILRE V Q+ + Q L AN + K+K GE E +V+
Sbjct: 248 LGLATHEVNFSILREEVLFGKQKYEKEKSNQQTILDANGTQDMRKKKRGEHGEHDADVIP 307
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIP---NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ P QFLHI TLREYL++EF +P PF D E +VDDF+F+CFFVGNDFLPH+P+
Sbjct: 308 TDQTPLQFLHIATLREYLEFEF-LPLAQTLPFPYDFERVVDDFVFLCFFVGNDFLPHLPS 366
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L+IR+GA++ L+ +Y K L GYLTD + +L RV + VG+ ED +F +RA Q
Sbjct: 367 LDIRDGALDFLILMYAKLLPTLNGYLTDAGEVNLSRVNAILAQVGAVEDEVFLRRA-AKQ 425
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
++R ++ + + D + + V + + RLD
Sbjct: 426 AESDRFRKNRFSNEKKDQIGAASVRSDAVEIQKKR--------------------RLDQT 465
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
+ + A G E + +A++KE++ + D +
Sbjct: 466 N-----------VIADAKYGGMSAE-------------QAIQARVKEMVDGQLDKHRQE- 500
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
D V+LGEPGWK RYY +KF A K V+ Y EGLCWVM YYY G SW
Sbjct: 501 -VNDVVRLGEPGWKARYYSDKFKADDIAHGGGKAK-VLQSYVEGLCWVMKYYYSGCASWN 558
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYP+HYAPFASDL ++D+F ISF LG PF+PF QL+GVFP+AS HA+P+ YR L+ DP
Sbjct: 559 WFYPFHYAPFASDLVNIDKFTISFHLGQPFRPFEQLMGVFPAASGHAIPKPYRWLLRDPK 618
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
SPI DFYPT+ VD NGK W + LPFIDEARLL ++ L+ E +RN
Sbjct: 619 SPIIDFYPTEIPVDPNGKPMPWLWVVLLPFIDEARLLQAMEPENEKLSALEKKRN 673
>gi|255542378|ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 964
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 299/429 (69%), Positives = 359/429 (83%), Gaps = 3/429 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVV-IDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YPL + DV+EEEP +GV P+D SKPNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHP+ +P P T+D+VF+ +FDYID LF +VRPRKLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPDGKPPPPTYDDVFKSIFDYIDHLFTLVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGT+FMAVLS LQYY+
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGKLLSPKEKPETSDSNVITPGTQFMAVLSTGLQYYVQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+RLN++PGW+ KVILSDANVPGEGEHK+MSY+RLQRNL G++PNTRHCLYGLDADLIML
Sbjct: 181 MRLNHNPGWKYTKVILSDANVPGEGEHKVMSYIRLQRNLSGFNPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
ALATHE+HFSILRE+V PGQQ+KCF CGQ GHLAA+C GK +++ + D+V + K
Sbjct: 241 ALATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGKPGDNPLDWNVE-DDVPIHK 299
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL YE +PNPP EI+ E I+DDF+F+CFFVGNDFLPHMPTLEIREG
Sbjct: 300 KKYQFLNIWVLREYLQYELDVPNPPLEINFERILDDFVFLCFFVGNDFLPHMPTLEIREG 359
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM VY++EF A+GGYLTD + +L RVEHFIQ+V YE++IFQKR R+ Q+ E
Sbjct: 360 AINLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRI-QQFLENN 418
Query: 420 KREKAQARR 428
+ + +ARR
Sbjct: 419 EEMRLKARR 427
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 157/281 (55%), Positives = 194/281 (69%), Gaps = 7/281 (2%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
EN EE + K + R+ S+ + P DKVKLGEPG+KERYY EKF TP+E ++ R
Sbjct: 416 ENNEEMRLKAR---RESSEEIQT--PAVDKVKLGEPGYKERYYAEKFGLTTPDEIDKVRN 470
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
DVVL+Y EGLCWV YYY+GVCSWQWFYPYHYAPFASDLK L I+F LG PFKPF+Q
Sbjct: 471 DVVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFLGEPFKPFDQ 530
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
L+G P+ASS+ALPE YRKLMTD +SPIS F+P DFE+DMNGKR++WQGIAKLPFIDE +
Sbjct: 531 LMGTLPAASSNALPEEYRKLMTDSSSPISRFFPLDFEIDMNGKRFAWQGIAKLPFIDERK 590
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 748
LL + KK+E TLTEEE RNS+M D+L+V +HP++A + + L +R
Sbjct: 591 LLAQTKKLESTLTEEERLRNSVMLDLLYVHPAHPMAAEVIAHYQGFNSLPQYQRKPWA-- 648
Query: 749 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
++ S GMNGY+ + SPV DI NQVL
Sbjct: 649 IDTNASAGMNGYLWLSERNMWRSTIASPVNGFPDIEHNQVL 689
>gi|357111459|ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Brachypodium distachyon]
Length = 992
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 304/439 (69%), Positives = 359/439 (81%), Gaps = 14/439 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP V+D EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAAEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RP+PTT+D+VF+ +FDYID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPSPTTYDQVFKSIFDYIDHLFCLVRPRKLVYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR +FE EGR L K S+ DSNVITPGT+FM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRLDFEAEGRTLVQKQKSEAIDSNVITPGTQFMFVLSSALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV--- 296
+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G A + D VV
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGPA---------QADNVVELP 291
Query: 297 -VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ KK YQFL+IW LREYL+ + I +PPF+I+ E IVDDF+F+CFFVGNDFLPHMPTLE
Sbjct: 292 PIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERIVDDFVFICFFVGNDFLPHMPTLE 351
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
IREGA+NLLMA+Y+ EF+ +GGYLTDG + L RVEHFIQ+V +E++IF+KRAR+ Q +
Sbjct: 352 IREGALNLLMAIYRSEFKPMGGYLTDGGEVLLERVEHFIQSVAVHEEQIFRKRARIQQAY 411
Query: 416 AERIKREKAQARRGDDVEP 434
+R K Q +DV P
Sbjct: 412 ENNEERRKGQRENSEDVNP 430
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/282 (52%), Positives = 191/282 (67%), Gaps = 9/282 (3%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEER-EETR 567
EN EE + +E D NP D VKLGEPG++ERYY EKF + + ++ +
Sbjct: 412 ENNEERRKGQRENSEDV-------NPYVDMVKLGEPGYRERYYAEKFREEAESKPIDQVQ 464
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
+DVV +Y EGLCWVM YYY+GVCSWQWFYPYHYAPFASDLK L +F I+F LG PFKPF+
Sbjct: 465 RDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLTEFEITFFLGQPFKPFD 524
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+G P+ASS+ALP++Y LMTDPNSP+ FYP DFE+DMNGKR++WQGIAKLPFIDE
Sbjct: 525 QLMGTLPAASSNALPKYYGDLMTDPNSPLKYFYPKDFEIDMNGKRFAWQGIAKLPFIDER 584
Query: 688 RLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE 747
RLL E +K+E +LTEEE RN M D+++V +HPL+A I L + C Q + +
Sbjct: 585 RLLAETQKVEDSLTEEERFRNRTMFDIIYVRETHPLAAQIAFLYQMCTQPSTTDPSYLIP 644
Query: 748 RLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
++P S GMNG++ + + SPV I N+VL
Sbjct: 645 -IDPAASGGMNGFLCLSQRNWYSISVGSPVKGFNGITHNRVL 685
>gi|224131346|ref|XP_002328516.1| predicted protein [Populus trichocarpa]
gi|222838231|gb|EEE76596.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 309/439 (70%), Positives = 356/439 (81%), Gaps = 3/439 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVV-IDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YPL + DVIEEEP +G P+D SKPNPNG+EYDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE +PAP T+D+VF+ +F YID LF +VRPRKLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSIFVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAA + AEEERLR+EFE EG L K + DSNVITPGT+FMAVLSIALQYYI
Sbjct: 121 RAAKDAAQAEAEEERLRKEFEAEGVLLSVKEKPETRDSNVITPGTQFMAVLSIALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN++PGW+ KVILSDANVPGEGEHKIMSY+RLQRN+PG++ NTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWQNTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNSNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHEVHFSILRE+V PGQQDKCFLCGQ GHLAA C GK A +++ D+ + K
Sbjct: 241 SLATHEVHFSILREMVIFPGQQDKCFLCGQAGHLAAECRGKQGDDALDWNVV-DDTPIHK 299
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL Y+ IPNPPF ID E IVDDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 300 KKYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIREG 359
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM +Y++EF A+GGYLT + L +VEHFIQ+V YE++IFQKRAR+ Q E
Sbjct: 360 AINLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRARIQQAF-ENN 418
Query: 420 KREKAQARRGDDVEPLAQP 438
+ K +ARR E A P
Sbjct: 419 EEMKHKARRDLSEEIQAPP 437
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/281 (56%), Positives = 201/281 (71%), Gaps = 7/281 (2%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
EN EE K K + RD S+ + P DKVKLGEPG+KERYY EKF+ EE ++ K
Sbjct: 416 ENNEEMKHKAR---RDLSEEIQA--PPVDKVKLGEPGYKERYYAEKFDLSNEEEIDKVTK 470
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
DVVL+Y EGLCWV YYY+GVCSWQWFYPYHYAPFASD+KDLD+ I+F LG PFKPF+Q
Sbjct: 471 DVVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDIKDLDEMEITFFLGEPFKPFDQ 530
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
L+G P+ASS+ALPE YRKLMTDP+SPI F+P+DFE+DMNGKR++WQGIAKLPFIDE +
Sbjct: 531 LMGTLPAASSNALPEEYRKLMTDPSSPIHQFFPSDFEIDMNGKRFAWQGIAKLPFIDERK 590
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 748
LL + KK+E TL EEE RNS+M D+L+V HPLS + + H +L + ER+ +K
Sbjct: 591 LLAQTKKLERTLMEEEQVRNSVMRDLLYVHPVHPLSQQVISYYHHNYRLPVSERIALK-- 648
Query: 749 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
++ S GMNGY+ + V SP+ + + NQVL
Sbjct: 649 IDTRASGGMNGYLWLSERNVWRSVVPSPINGLPTLEYNQVL 689
>gi|255941486|ref|XP_002561512.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586135|emb|CAP93883.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1015
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 342/803 (42%), Positives = 468/803 (58%), Gaps = 87/803 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ VIEE+P V+DG +IP+D ++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIVSPVIEEQPQVVDGEEIPIDITRPNPNGEEQDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ ++ Y DR+ MVRPRKLL +AIDGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPADEQEMMMEIYKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAVLSIAL 174
++++A ++ ++E L +Q + G +L + Q +DSNVITPGT FM +L+ +L
Sbjct: 121 SAQEAKENDQKKEELHKMLAQQHATKTGEQLIREEVVQKTWDSNVITPGTPFMDILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+I +LN DPGWE +K+I+SDA VPGEGEHKIM++ DA
Sbjct: 181 RYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNF---------------------DA 219
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML L THE +F +LRE VF + + C LCGQ GH A C G+ K K+GEFDEK
Sbjct: 220 DLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQNGHKAEECLGRPKEKSGEFDEK-- 277
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ P KP+ +LH+ LREYL E R+P PF DLE +DD++FMCFFVGNDFLPH+P+
Sbjct: 278 QHAAPLKPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPS 337
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L+IRE I+ L+A+++ A+G YLT L+ + +Q + ED IF +R + +
Sbjct: 338 LDIRENGIDTLIAIWRDSLPAMGSYLTKDGSVELKNAQIILQGLAKQEDAIFARRRQADE 397
Query: 414 RHAERIKR----------EKAQAR---------------RGDDVEPLAQPDSLVPVSRFH 448
R KR E+AQ R RG EP+ P L+ R H
Sbjct: 398 RKQANEKRRKEQDAARNEERAQKRRRSSPQYDLTAGDRSRGGGGEPVP-PMELITPGRGH 456
Query: 449 GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAA----------IVE 498
++ + S V R N + S +L G GA V
Sbjct: 457 LNKETRELTHSMVINRGAVYRA-NMENKSAAAVLKSKLMKGKQDGAGDSETPATDGEDVS 515
Query: 499 AENSFETDP----QENKEEFKAKLKELLRDKSDA----------FNSDNPEEDKVKLGEP 544
+E +T P + +E + + E+ D+ D P+ED VKL EP
Sbjct: 516 SETPEQTSPGVLGKRKADEAEQDVTEIGTPGRDSPLPATVAAEKPKQDEPQEDTVKLWEP 575
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
G+ +RYYE+KF + E R V Y GLCWV+ YY++G SW W+YP HYAPFA
Sbjct: 576 GYADRYYEQKFGVDPKD--LEFRHQVAREYAIGLCWVLRYYFQGCPSWTWYYPRHYAPFA 633
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
+D D+ ++ FE G FKPF QL+GV P++S+HALP+ + LM P+S I DFYP DF
Sbjct: 634 ADFVDIADMDVKFEKGTIFKPFEQLMGVLPASSNHALPKVFHPLMESPDSEIIDFYPEDF 693
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP-- 722
+D+NGK+++WQG+ LPFIDE RLL+ + K+ LTE+E RN+ ++L + +P
Sbjct: 694 PLDLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNTHGQEVLLLSDRNPLY 753
Query: 723 --LSASIYTLDEHCKQLKIKERV 743
L A+ Y+ Q +KE V
Sbjct: 754 QDLVANFYSKKPGPAQYPLKEDV 776
>gi|330916061|ref|XP_003297277.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
gi|311330133|gb|EFQ94619.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
Length = 883
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 342/820 (41%), Positives = 483/820 (58%), Gaps = 73/820 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP +V+ V EE P + IPVD + PNPNG E+DNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP T ++ +F+Y DR+ MVRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFER--EGRKLPPKSD--------SQVFDSNVITPGTEFMAVL 170
A+++ A E++ R EF++ +K D + +DSN ITPGT FM +L
Sbjct: 121 AARE----AKEKDEERAEFQKILNSQKASRGEDIDTLEEVMEKTWDSNAITPGTPFMHLL 176
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
+ +LQY+ + DP W+ +KVI+SDA+VPGEGEHKIM+++R QR +P +DPNT H +Y
Sbjct: 177 AESLQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIY 236
Query: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFD 289
GLDADLIML+LATHE HF +LRE VF +DK C CG+ GH+ NCE K +
Sbjct: 237 GLDADLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNCEFPEDEKKLTEE 296
Query: 290 EKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 346
E +E + KPY +LH LREYL E P F+ DLE +DD++FMCFFVGND
Sbjct: 297 EAAEEWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDWVFMCFFVGND 356
Query: 347 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
FLPH+P+LEIR+ I+LL+++++ + Y+T P +RRV+ + A+ + E IF+
Sbjct: 357 FLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSALATREAGIFK 416
Query: 407 KRARLHQRHAERIKREKAQA----RRGDDVEPLAQPDSLVPVSRFHGSRLASGP---SPS 459
KR + R A R +AQ+ R+ D + ++ P + ++G P
Sbjct: 417 KRKEVSDRQAANRARREAQSNAHKRQRTDNDGVSAP-GFKRAKETTDTYTSAGIVFFDPK 475
Query: 460 PYQQSEC------VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP---QEN 510
Q E + + + ++ L G ++ E E + +++P +
Sbjct: 476 DAQSKEVRDVHKDIMHTRDSQSNKSAAARLKELLKAKADGTSLPEPEQTPDSEPALESAS 535
Query: 511 KEEFKAKLKELLRDKSDAFNS------------------------DNPEEDKVKLGEPGW 546
E +L + D+ D ++ D+P ED + L E G+
Sbjct: 536 GTETPVQLGKRKLDEVDDLDNGTPGRNTPVVPQSPTQAAQPPKKDDSPPEDTIMLWEDGY 595
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
+ERYYE+KF+ P + R V +Y EGLCWV+ YY +G SW W++P+HYAPFA+D
Sbjct: 596 EERYYEQKFHV-APNDI-AFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYAPFAAD 653
Query: 607 ---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
L+D+D + FE G PF P+ QL+GV P+AS+HA+PE +R LM DPNS I DFYP D
Sbjct: 654 FVGLEDMDPRKL-FEKGVPFHPYEQLMGVLPAASNHAIPEPFRVLMEDPNSSIVDFYPED 712
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL 723
F +D+NGK+++WQG+A LPFIDE RLL+ + L+++E +RN + L
Sbjct: 713 FPIDLNGKKFAWQGVAVLPFIDEKRLLEAMGTKYPELSDDERKRNEFGKETLM------F 766
Query: 724 SASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 763
S D+ K L K + K +++P S ++G I P
Sbjct: 767 SQESGLFDDVEKALYRKG--QQKHKIDPAKSRALHGDIEP 804
>gi|312384683|gb|EFR29353.1| hypothetical protein AND_01770 [Anopheles darlingi]
Length = 867
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 343/758 (45%), Positives = 444/758 (58%), Gaps = 45/758 (5%)
Query: 39 SKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLL 98
S PNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+ IDRL +VRPRK+L
Sbjct: 2 SNPNPNRIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLMNIVRPRKVL 61
Query: 99 YMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDS 157
YMAIDGVAPRAKMNQQRSRRFRASK+AA+ A E R+R+E +G LPP K FDS
Sbjct: 62 YMAIDGVAPRAKMNQQRSRRFRASKEAAEKATEVARIREELAAKGAILPPEKEKGSHFDS 121
Query: 158 NVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRN 217
N ITPGT FM LS LQYYIH R+NN PGW+ +KVILSDANVPGEGEHKIM Y+R QR
Sbjct: 122 NCITPGTPFMDRLSKCLQYYIHDRMNNYPGWKDLKVILSDANVPGEGEHKIMDYIRKQRV 181
Query: 218 LPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC 277
P YDPNT H L G DADLIML LATHE HF+I+RE F P + C +C Q GH +C
Sbjct: 182 QPDYDPNTHHVLCGADADLIMLGLATHETHFTIIREE-FLPNKDRPCDICQQIGHEMKDC 240
Query: 278 EGKAKRKAGEFDEKGDEVVVPKKP-----YQFLHIWTLREYLDYEFRIPNPPFEIDLECI 332
G + D + P P + F+ + L+EYL E +PN PF D E +
Sbjct: 241 SGLQSER--------DMIKTPPGPGKETQFIFVRLNVLKEYLQKELDMPNLPFAYDFERV 292
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 392
+DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YKK GYLTD L RVE
Sbjct: 293 IDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLITLYKKCVYKTRGYLTDSGSVVLDRVEM 352
Query: 393 FIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRL 452
+ +G ED IF++R R ER KR + Q R +P+ + S+
Sbjct: 353 IMTDLGFAEDEIFRQRKVSEDRFKERNKRMRLQKDRQQ------RPN----FQHINNSQF 402
Query: 453 ASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 512
A P+P + + N + + + + +A E + P++ K
Sbjct: 403 A----PTPLGRGVQPAAIVNARQEAAHFRMLGSGGGSGSASSATGGNEATEGGKPRDMKR 458
Query: 513 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 572
+ + L ++ ++ + D +V+L E G+K+RYYE KF+ + + R+ V
Sbjct: 459 KAEEPLSVVVAEEEEKETPD-----EVRLWEDGFKDRYYESKFDVSP--QNIKFRQTVAW 511
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 632
Y GLCWV+ YYY+G SW+W++PYHYAPFASD K L+ N F+ G PFKP QL+GV
Sbjct: 512 EYVRGLCWVLRYYYQGCASWEWYFPYHYAPFASDFKHLENVNTHFDRGTPFKPLQQLMGV 571
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
FP+AS +P + +LM DP SPI DFYP DF +D+NGK+++WQG+A LPF+DE RL
Sbjct: 572 FPAASRSHVPPAFAELMVDPRSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFRA 631
Query: 693 VKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPE 752
LT+EE RN LFVL P S TL + EV +
Sbjct: 632 TDPKVPLLTQEERLRNENGDAKLFVL---PGSTGYRTLAGLYGGNDVDYEREVAVTV--- 685
Query: 753 LSDGMNGYISPCAGD-PHPPVFRSPVASMEDIMGNQVL 789
D + G I P + P SP+ + + N+VL
Sbjct: 686 --DYVQGLIVPTKENVPQDGTLPSPIPGLTAVTDNRVL 721
>gi|38569540|gb|AAR24369.1| 5'-3' exoribonuclease 2 isoform 3 [Homo sapiens]
Length = 907
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 351/796 (44%), Positives = 464/796 (58%), Gaps = 95/796 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+ TS N
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEK------------TSTKNE----------------- 31
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 32 --------------DEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 77
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 78 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 137
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 138 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 197
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 198 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 256
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE A
Sbjct: 257 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 316
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 317 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 376
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 377 EKRKRMKRD---QPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSS 428
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S P+ SF +D + L + R D+ + P
Sbjct: 429 PSISPN-------------------TSFTSDGS------PSPLGGIKRKAEDSDSEPEP- 462
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+
Sbjct: 463 EDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWY 520
Query: 596 YPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 521 YPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDS 580
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+
Sbjct: 581 SIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDV 640
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVF 773
LFV HPL I L Q E VEV PEL G+ G S P +
Sbjct: 641 LFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGKFSLDEEAILPDQIV 692
Query: 774 RSPVASMEDIMGNQVL 789
SPV + D+ N V+
Sbjct: 693 CSPVPMLRDLTQNTVV 708
>gi|395851967|ref|XP_003798518.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 908
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 347/798 (43%), Positives = 464/798 (58%), Gaps = 98/798 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEE------------------------------------ 24
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ +P DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 25 -------KTSPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 77
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 78 ASKEGMEAALEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 137
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGWE + VILSDA+VPGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 138 RLNNDPGWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 197
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 198 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 256
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 257 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 316
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 317 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 376
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKG 475
++ + +R +P P ++ GS++AS P + Y+ R+ N
Sbjct: 377 EKRKRMKRD---QPAFTPSGILTPHALSSRNSPGSQVASNPRHAAYEM-----RMQNNNC 428
Query: 476 TSGRPHKVPRLSSG--ATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
+ S G + +G +AE+S +S+
Sbjct: 429 SPSISPNTSFTSDGSPSPVGGIKRKAEDS---------------------------DSEP 461
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+
Sbjct: 462 EPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWK 519
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP
Sbjct: 520 WYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDP 579
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE +RNS+ +
Sbjct: 580 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGS 639
Query: 713 DMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-P 771
D+LFV HPL I L Q E V+V PEL G+ G S P
Sbjct: 640 DVLFVGKRHPLHDFIVEL----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQ 691
Query: 772 VFRSPVASMEDIMGNQVL 789
+ SPV + D+ N +
Sbjct: 692 IVCSPVPMLRDLTQNTAV 709
>gi|15221841|ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3' exoribonuclease 4; AltName: Full=Protein ACC
INSENSITIVE 1; AltName: Full=Protein ETHYLENE
INSENSITIVE 5; AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis thaliana]
gi|17381112|gb|AAL36368.1| putative exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease [Arabidopsis thaliana]
gi|109627646|gb|ABG34298.1| At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
Length = 947
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/437 (67%), Positives = 354/437 (81%), Gaps = 10/437 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVK---IPVDTSKPNPNGLEYDNLYLDMNG 57
MGVPAFYRWLA++YP ++DV+EEEP DG + IPVD ++PNPNG E+DNLYLDMNG
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPT--DGGRGDLIPVDITRPNPNGFEFDNLYLDMNG 58
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IIHPCFHPE +PAP T+D+VF+ MF+YID LF +VRPRK+LY+AIDGVAPRAKMNQQRSR
Sbjct: 59 IIHPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSR 118
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFRA+KDAA++ AEEERLR++FE EG+ L K ++ DSNVITPGT FMA+LS+ALQYY
Sbjct: 119 RFRAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYY 178
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I RLN++PGW +KVILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLI
Sbjct: 179 IQSRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML+LATHEVHFSILREV+ PGQQ+KCF+CGQ GH A++C GK+ D + +
Sbjct: 239 MLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAAD-----IPI 293
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KK YQFL+IW LREYL YE IP+PPF I+ E I+DDF+F+CFFVGNDFLPHMPTLEIR
Sbjct: 294 HKKKYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIR 353
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
EGAINLLM VY+KEF A+GGYLTD + L RVEHFIQAV ED+IFQKR R+ Q
Sbjct: 354 EGAINLLMHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMDN 413
Query: 418 RIKREKAQARRGDDVEP 434
+ ++ R +V P
Sbjct: 414 NEEMKQRSRRDPSEVPP 430
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 148/281 (52%), Positives = 191/281 (67%), Gaps = 7/281 (2%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
+N EE K + + RD S+ P +DK+KLGEPG+KERYY EKF+ PEE E+ ++
Sbjct: 412 DNNEEMKQRSR---RDPSEV--PPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQ 466
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
D+VL+Y EGLCWV YYY+GVCSWQWFYPYHYAPFASDLK+L I+F +G PFKPF+Q
Sbjct: 467 DMVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQ 526
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
L+G P+ASS+ALP YRKLMTDP+SPI FYP DFE+DMNGKR++WQGIAKLPFI+E
Sbjct: 527 LMGTLPAASSNALPGEYRKLMTDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKL 586
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 748
LL +K+E TLT EE +RNS+M D+L+V +HPL I + + E +
Sbjct: 587 LLAATRKLEETLTVEEQQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWM-- 644
Query: 749 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
++P S GMNG++ + SPV + I N+ L
Sbjct: 645 IDPNSSQGMNGFLWFSERNGFQTRVDSPVNGLPCIEQNRAL 685
>gi|302418923|ref|XP_003007292.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261352943|gb|EEY15371.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 894
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/723 (45%), Positives = 443/723 (61%), Gaps = 60/723 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ V+E++P+ + DG IPV+T+ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVETTGPNPNGEEQDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFERE-GRKLPPKS----DSQVFDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +++ G LPP++ + + FDSN ITPGT FM L+ +L
Sbjct: 121 RSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W ++K+I+SDA VPGEGEHKIM+YVR QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML LATHE HF +LRE VF + K C +CGQ GH A C+G+AK K GE+DE+
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYDEQDK 300
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
V + KP+ +LH+ REYL E +P+ PF DLE +DD++FMC FVGNDFLPH+P
Sbjct: 301 AVAL--KPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVGNDFLPHLPA 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE I+ L ++K+ +GGY+T L+RV+ + + ED IF++R
Sbjct: 359 LEIRENGIDALTTIWKENLPHMGGYVTKDGHIDLKRVQLIMDGLAKQEDAIFKRRKEQED 418
Query: 414 RHAERIKREKAQ------------ARRGDDVEPLAQPDS---LVPVSRFHGSRLASGPSP 458
R KR K Q + RG P+ S L PVS F + P
Sbjct: 419 RREANAKRRKLQDERSGRGGRADASGRGRGKPPMDNASSGLALFPVSGFPNA------DP 472
Query: 459 SPYQQSECVGRLDNGKGTSGRPHKVPRL-------SSGATIGAAIVEAENSFETDPQENK 511
S VGR N + +K +SGA +A +A + +
Sbjct: 473 SAVTHDMVVGRSSNANINANAANKSAANVIRDRIQASGAQGKSANGDATTHPKVEVPAVA 532
Query: 512 EEFKAKLKELLRDKSDAFNSDNPEE---------------DKVKLGEPGWKERYYEEKFN 556
EE A +++ K+D D P + D V++ E G+ +RYYE+KF+
Sbjct: 533 EEGAAAASSVVKRKADVL--DGPSQLTPNTGPSAAEEAAIDHVRMWEEGYADRYYEQKFH 590
Query: 557 AKTPEEREET--RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 614
+R + R V Y EGLCWV+ YYY+G SW W+YPYHYAPFA+D DLD+
Sbjct: 591 V----DRNDIAFRHKVAQAYVEGLCWVLLYYYQGCPSWDWYYPYHYAPFAADFADLDKIE 646
Query: 615 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
ISFE G KPF QL+ V P+AS ALPE + LM + +S + DFYP +FE+D+NGK+++
Sbjct: 647 ISFEKGRISKPFEQLMSVMPAASRRALPEVFHDLMLNEDSEVIDFYPQEFEIDLNGKKFA 706
Query: 675 WQG 677
WQ
Sbjct: 707 WQA 709
>gi|356576739|ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 931
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 300/437 (68%), Positives = 356/437 (81%), Gaps = 9/437 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVV-IDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YPL +ADV+EE+P V DGV P+D SKPNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHP+ +PAP T+D+VF+ +FDY+D L+ +VRPRKLLY+AIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPDGKPAPATYDDVFKSIFDYLDHLYTLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAA++ AEEERLR+EF+ EG+ L K + DSNVITPGT+FM LS++LQYYI
Sbjct: 121 RAAKDAAEAEAEEERLRKEFQSEGKVLSSKDKPETSDSNVITPGTQFMVALSVSLQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN++P W KVILSD+N PGEGEHKIM Y+RLQRNLPG++PNTRHCLYGLDADLIML
Sbjct: 181 TRLNHNPSWRNTKVILSDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHEVHFSILREVV PGQQDKCFLCGQ GH AA+C+ A +FD D+ + K
Sbjct: 241 SLATHEVHFSILREVVTLPGQQDKCFLCGQAGHFAADCQ------AEDFDTP-DDSPIHK 293
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL +E IPNPPFEID E +VDDF+F+CFFVGNDFLPHMPTLEIREG
Sbjct: 294 KKYQFLNIWVLREYLQFELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREG 353
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM +Y+KEF A+GGYLTD + L RV+ FIQ V +ED+IFQKR R+ Q AE
Sbjct: 354 AINLLMHIYRKEFTAIGGYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVRI-QLAAENN 412
Query: 420 KREKAQARRGDDVEPLA 436
+ +A+AR EP A
Sbjct: 413 EEMRARARGEMPGEPRA 429
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/281 (53%), Positives = 194/281 (69%), Gaps = 7/281 (2%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
EN EE +A+ + + + A DKVKLGEPG+KERYY EKF EE ++ +K
Sbjct: 410 ENNEEMRARARGEMPGEPRA-----SLLDKVKLGEPGYKERYYVEKFGVSNLEEIDKIKK 464
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
D+VL+Y EGLCWV YYY+GVCSW+W+YPYHYAPFASD KDL I+F G PFKPF+Q
Sbjct: 465 DIVLKYVEGLCWVCRYYYQGVCSWKWYYPYHYAPFASDFKDLPDLEINFFPGEPFKPFDQ 524
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
L+G P++SS ALP+ YR LM+DP+SPI FYP DFE+DMNGKR++WQG+AKLPFIDE +
Sbjct: 525 LMGTLPASSSSALPKKYRDLMSDPSSPIFHFYPADFEIDMNGKRFAWQGVAKLPFIDEKK 584
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 748
LL ++IE TLTEEE RNS+M D+L+V +H L+A I + C QL ER +
Sbjct: 585 LLAATRRIEDTLTEEEQLRNSVMLDLLYVNRAHNLAAHILSYYHVCSQLPPHER--CVQP 642
Query: 749 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
++ S GMNGY+ C + V SP++ ++DI NQVL
Sbjct: 643 IDTNASGGMNGYLWLCERNVFSSVISSPISGLQDIEYNQVL 683
>gi|356505926|ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 960
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 303/442 (68%), Positives = 353/442 (79%), Gaps = 12/442 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA++YPL +ADV+EEEP V G VD SKPNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEEPSVGSGA---VDVSKPNPNGMEFDNLYLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+ + APTT+++VF+ +FDYID +F +VRPRKLLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCFHPDGKSAPTTYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKDAADSAAEE-----ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
A+KDAA+ A E ERLR+EFE E + L K + +DSNVITPGT FM VLS+ALQ
Sbjct: 118 AAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKVKPETYDSNVITPGTPFMGVLSVALQ 177
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YYI RLN +PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG++PNTRHCLYGLDAD
Sbjct: 178 YYIQTRLNYNPGWRNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGLDAD 237
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML+LATHEVHFSILREV+ PGQQ+KCF CGQ GH AA C GK KA +++ D+
Sbjct: 238 LIMLSLATHEVHFSILREVITFPGQQEKCFQCGQVGHFAAECRGKPGEKAEDWNPV-DDT 296
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ KK YQFL+IW LREYL YE IPNPPFEID E IVDDF+F+CFFVGNDFLPHMPTLE
Sbjct: 297 PIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLE 356
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
IREGA+NLLM +Y+KEF A+GGYLT+ + L RVEHFIQ+V +ED+IF KR R+ Q
Sbjct: 357 IREGAVNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFLKRVRIQQ-- 414
Query: 416 AERIKRE-KAQARRGDDVEPLA 436
A I E KA+AR EP A
Sbjct: 415 ATEINEEMKARARGEMPGEPRA 436
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/253 (58%), Positives = 182/253 (71%), Gaps = 2/253 (0%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
DKVKLGEPG+KERYY EKF A E+ E+ +KD VL+Y EGLCWV YYY+GVCSWQW+Y
Sbjct: 440 DKVKLGEPGYKERYYAEKFGALDLEKIEKIKKDTVLKYVEGLCWVCRYYYQGVCSWQWYY 499
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFASDLKDL I+F LG PFKPF+QL+G P++SS ALPE YR LM DP+SPI
Sbjct: 500 PYHYAPFASDLKDLADLEITFFLGEPFKPFDQLMGTLPASSSSALPEKYRDLMIDPSSPI 559
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
FYP DFE+DMNGKR++WQG+AKLPFIDE +LL K+E TLTEEE RNS M D+L+
Sbjct: 560 LQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEEQLRNSKMLDLLY 619
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP 776
V +H L+ I + ++ QL + ER + ++P SDGMNGY+ + SP
Sbjct: 620 VSSAHNLAPHILSYHQYSCQLPLHERPALP--IDPRASDGMNGYLWLYERNVLRTTVSSP 677
Query: 777 VASMEDIMGNQVL 789
+ ++DI NQVL
Sbjct: 678 IKGLQDIEFNQVL 690
>gi|384490873|gb|EIE82069.1| hypothetical protein RO3G_06774 [Rhizopus delemar RA 99-880]
Length = 967
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 353/792 (44%), Positives = 471/792 (59%), Gaps = 52/792 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL++K+P VV IEE P ++G+ IPVDT+KPNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSDKFPKVVTPAIEERPKTVNGMTIPVDTTKPNPNNEEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +PAP T DE+ +F Y+DR+ +VRPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPEGKPAPATEDEMMIEIFTYLDRIVDIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A++ A ER+ E G++ + FDSN ITPGT FMA L+ L+Y+I
Sbjct: 121 AAQLAQIERDASERVAYELAAIGQEHQMEKKESHFDSNCITPGTPFMAHLATCLRYHIAS 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+ N DP W+K+KVILSDA VPGEGEHK+M ++R++R+ +DPNT H +YGLDADLIMLA
Sbjct: 181 KQNTDPLWKKLKVILSDATVPGEGEHKVMEFIRVERSRSEHDPNTSHVMYGLDADLIMLA 240
Query: 241 LATHEVHFSILREVVFTPGQ-QDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L THE HF I+RE VF + + C C + GH A C A + +
Sbjct: 241 LGTHEPHFKIIREDVFADNKRKSNCTNCNRRGHTADKCPLSEDSAAEPSKDDNSNL---- 296
Query: 300 KPYQFLHIWTLREYLDY--EFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KPY FLH+ LREYL+Y +F IP P+ +LE +DD++FMCFFVGNDFLPH+P+LEIR
Sbjct: 297 KPYVFLHVNILREYLEYALKFNIPGIPW--NLERAIDDWVFMCFFVGNDFLPHLPSLEIR 354
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
EGAI+ L ++KK +GGY+T L+RV+ + +G ED IF+ R +R A+
Sbjct: 355 EGAISTLSLLWKKCMPMMGGYMTKDGDVDLKRVQVLVSELGHMEDTIFRDRKAGEERRAQ 414
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD------ 471
KR K + R + + +S ++ + + P+ + + R +
Sbjct: 415 GAKRRKLENERRANEAKSREDNSFAVMT----AAPVNNPNAAMTNREVVANRAELRLANL 470
Query: 472 ------NGKGTSGRPHKVPRLSSGA--TIGAAIVEAENSFET--------------DPQE 509
+ + P + G T A V+ N E DP E
Sbjct: 471 SAAAALKAQMNESSEQEPPMVQKGTKRTAEEAGVDDTNDEENEEDSSITEDEPDTFDPVE 530
Query: 510 NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKD 569
+ ++ + + K DA P +D+V+L E GWKERYY KF EE++E R +
Sbjct: 531 AGKAILKRVADEKKQKDDAAREREP-DDEVRLWESGWKERYYGTKFRLNL-EEKDEIR-E 587
Query: 570 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 629
+V Y EGL WV YYY G SW W+YPY+YAP ASD ++D F+I FE P +PF QL
Sbjct: 588 IVKSYCEGLIWVFKYYYLGCVSWSWYYPYYYAPMASDFINIDSFDIKFEKSAPLRPFEQL 647
Query: 630 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+GV P+AS +P + LMTD NSPI D+YPT FEVDM+GK++ WQG+ KLPFI+ RL
Sbjct: 648 MGVLPAASRSHIPAPFHPLMTDENSPIIDYYPTHFEVDMDGKKWEWQGVVKLPFINSERL 707
Query: 690 LDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERL 749
L + + L EEE +RNS+ +L+V SH A + D + K R K L
Sbjct: 708 LAAMDTVYDQLNEEEVQRNSVGPAVLYVSESH--KAYNFLSDVYTK------RSSDKAIL 759
Query: 750 NPELSDGMNGYI 761
N L+DG+ G I
Sbjct: 760 NARLTDGLTGEI 771
>gi|4585991|gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 294/421 (69%), Positives = 350/421 (83%), Gaps = 12/421 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVK---IPVDTSKPNPNGLEYDNLYLDMNG 57
MGVPAFYRWLA++YP ++DV+EEEP DG + IPVD ++PNPNG E+DNLYLDMNG
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPT--DGGRGDLIPVDITRPNPNGFEFDNLYLDMNG 58
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IIHPCFHPE +PAP T+D+VF+ MF+YID LF +VRPRK+LY+AIDGVAPRAKMNQQRSR
Sbjct: 59 IIHPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSR 118
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFRA+KDAA++ AEEERLR++FE EG+ L K ++ DSNVITPGT FMA+LS+ALQYY
Sbjct: 119 RFRAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYY 178
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I RLN++PGW +KVILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLI
Sbjct: 179 IQSRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLI 238
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML+LATHEVHFSILREV+ PGQQ+KCF+CGQ GH A++C GK+ D + +
Sbjct: 239 MLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAAD-----IPI 293
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KK YQFL+IW LREYL YE IP+PPF I+ E I+DDF+F+CFFVGNDFLPHMPTLEIR
Sbjct: 294 HKKKYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIR 353
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
EGAINLLM VY+KEF A+GGYLTD + + RVEHFIQAV ED+IFQKR R+ Q+ +
Sbjct: 354 EGAINLLMHVYRKEFTAMGGYLTDSGE--VNRVEHFIQAVAVNEDKIFQKRTRIKQQRSR 411
Query: 418 R 418
R
Sbjct: 412 R 412
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/256 (55%), Positives = 180/256 (70%), Gaps = 2/256 (0%)
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
P +DK+KLGEPG+KERYY EKF+ PEE E+ ++D+VL+Y EGLCWV YYY+GVCSWQ
Sbjct: 421 PIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGVCSWQ 480
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLK+L I+F +G PFKPF+QL+G P+ASS+ALP YRKLMTDP+
Sbjct: 481 WFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTDPS 540
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI FYP DFE+DMNGKR++WQGIAKLPFI+E LL +K+E TLT EE +RNS+M D
Sbjct: 541 SPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVMLD 600
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
+L+V +HPL I + + E + ++P S GMNG++ +
Sbjct: 601 LLYVHPAHPLGQRILQYYHFYQHMPPHECLPWM--IDPNSSQGMNGFLWFSERNGFQTRV 658
Query: 774 RSPVASMEDIMGNQVL 789
SPV + I N+ L
Sbjct: 659 DSPVNGLPCIEQNRAL 674
>gi|238881714|gb|EEQ45352.1| 5'-3' exoribonuclease 2 [Candida albicans WO-1]
Length = 968
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 327/744 (43%), Positives = 450/744 (60%), Gaps = 51/744 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EEE I G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKY----ENPNPNG-ETDNLYLDMNGIVH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE + P T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A+KDA A + E QE E G + + +DSN ITPGT FM L+ AL+Y++
Sbjct: 116 AAKDAELKAKQLEIEVQERELRGEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVA 175
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L++DPGW ++VI+SDA VPGEGEHK+M+++R QR+ P YDPNT+HC+YGLDADLI L
Sbjct: 176 YKLSSDPGWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCIYGLDADLIFL 235
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP- 298
LATHE HF +LRE VF QDK F K + E + GD V
Sbjct: 236 GLATHEPHFRVLREDVF--ASQDKKFTI--------------KDQIAEANSNGDTVAKED 279
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKP+ +LH+ LREYL E P F +LE +DD++F+CFF GNDFLPH+P+L++R+
Sbjct: 280 KKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRD 339
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
I+ L+ +K+ L Y+T K +L+ VE + + E IF+ + QR E
Sbjct: 340 NGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQRREEN 399
Query: 419 IKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRLA--SGPSPSPYQ 462
KR K +Q +G D PL D +P+ G + + + S
Sbjct: 400 NKRRKLAQEQERALKRVYSSQVSKGKDKAPLT-ADVNMPLMDTSGQNVEGYANLTNSDIV 458
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 522
Q+ + N S ++ +L +V+ + + ++ +++L+E+
Sbjct: 459 QNRAILTKAN-LANSDAAAELKKLIDSKKTQVTVVQDQIATDSSANSETTTSESELEEIQ 517
Query: 523 RDKSDAFNSDNPEEDK------VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTE 576
D S + PEEDK +KL EPG+ +RYYE KF+ ++ EE E+T++DVV Y E
Sbjct: 518 SDNSLKRKLE-PEEDKQTQSDDIKLWEPGYNKRYYEAKFHCQSDEEIEQTKRDVVRHYVE 576
Query: 577 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHPFKPFNQLLGVF 633
G+ WV YYY+G SW W++PYHYAPFA+D +L++ + F+LG PF+PF QL+ V
Sbjct: 577 GIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFRPFEQLMSVL 636
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS H LP+ +R LM++P+S I DFYP +FE+DMNGK+ SWQGI LPFIDE RLLD V
Sbjct: 637 PAASGHTLPQVFRDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAV 696
Query: 694 KKIEHTLTEEEARRNSIMADMLFV 717
+K LT +E RN+ LF+
Sbjct: 697 QKKYGLLTPDEKSRNTNKEAELFI 720
>gi|68466241|ref|XP_722895.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
gi|68466536|ref|XP_722750.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|74656669|sp|Q5AMG5.3|XRN2_CANAL RecName: Full=5'-3' exoribonuclease 2
gi|46444743|gb|EAL04016.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|46444898|gb|EAL04170.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
Length = 968
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 327/744 (43%), Positives = 450/744 (60%), Gaps = 51/744 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EEE I G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKY----ENPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE + P T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A+KDA A + E QE E G + + +DSN ITPGT FM L+ AL+Y++
Sbjct: 116 AAKDAELKAKQLEIEVQERELRGEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVA 175
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L++DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P YDPNT+HC+YGLDADLI L
Sbjct: 176 YKLSSDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIFL 235
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP- 298
LATHE HF +LRE VF QDK F K + + + GD V
Sbjct: 236 GLATHEPHFRVLREDVF--ASQDKKFTI--------------KDQIADANSNGDTVAKED 279
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKP+ +LH+ LREYL E P F +LE +DD++F+CFF GNDFLPH+P+L++R+
Sbjct: 280 KKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRD 339
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
I+ L+ +K+ L Y+T K +L+ VE + + E IF+ + QR E
Sbjct: 340 NGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQRREEN 399
Query: 419 IKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRLA--SGPSPSPYQ 462
KR K +Q +G D PL D +P+ G + + + S
Sbjct: 400 NKRRKLAQEQERALKRVYSSQVSKGKDKAPLT-ADVNMPLMDTSGQNVEGYANLTNSDIV 458
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 522
Q+ + N S ++ +L +V+ + + ++ +++L+E+
Sbjct: 459 QNRAILTKAN-LANSDAAAELKKLIDSKKTQVTVVQDQIATDSSANSETTTSESELEEIQ 517
Query: 523 RDKSDAFNSDNPEEDK------VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTE 576
D S + PEEDK +KL EPG+ +RYYE KF+ ++ EE E+T++DVV Y E
Sbjct: 518 SDNSLKRKLE-PEEDKQTQSDDIKLWEPGYNKRYYEAKFHYQSDEEIEQTKRDVVRHYVE 576
Query: 577 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHPFKPFNQLLGVF 633
G+ WV YYY+G SW W++PYHYAPFA+D +L++ + F+LG PF+PF QL+ V
Sbjct: 577 GIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFRPFEQLMSVL 636
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS H LP+ +R LM++P+S I DFYP +FE+DMNGK+ SWQGI LPFIDE RLLD V
Sbjct: 637 PAASGHTLPQVFRDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAV 696
Query: 694 KKIEHTLTEEEARRNSIMADMLFV 717
+K LT +E RN+ LF+
Sbjct: 697 QKKYELLTPDEKSRNTNKEAELFI 720
>gi|357512203|ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 956
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 299/438 (68%), Positives = 349/438 (79%), Gaps = 5/438 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEE--EPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVPAFYRWLA++YP + DV+EE P V G PVD S+PNPNG+E+DNLYLDMNGI
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCFHP+ +PAP T+D+VF+ MFDYID LF +VRPRKLLY+AIDGVAPRAKMNQQRSRR
Sbjct: 61 IHPCFHPDGKPAPATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+KDAA++ AEEERLR EF + L K ++ DSNVITPGT FMAVLS+ALQYYI
Sbjct: 121 FRAAKDAAEAEAEEERLRNEFADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
RLN +PGW KV+LSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLYGLDADLIM
Sbjct: 181 QTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGLDADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+LATHE+HFSILREV+ PGQQ+KC++CGQ GHLAA C GK A D D+ +
Sbjct: 241 LSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNA--LDWPVDDTPIH 298
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KK YQFLHIW LREYL YE IP+PPFEID E IVDDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 299 KKKYQFLHIWVLREYLQYELLIPDPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA+NLLM +Y+KEF A+GGYLTD + L RVE+FIQ V +E++IFQKR R+ Q E
Sbjct: 359 GAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQ-EF 417
Query: 419 IKREKAQARRGDDVEPLA 436
+ +A+AR EP A
Sbjct: 418 NEGMRARARGEMPEEPRA 435
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/253 (56%), Positives = 180/253 (71%), Gaps = 3/253 (1%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
DKVKLG+PG+ ERYY EKF A PE E +KD+VL+Y EGLCWV YYY+GVCSWQW+Y
Sbjct: 439 DKVKLGQPGYTERYYAEKFGASDPE-IERIKKDIVLKYVEGLCWVCRYYYQGVCSWQWYY 497
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFASDLKDL I+F +G PF+PF+QL+G PS+SS ALPE YR LM +P+SPI
Sbjct: 498 PYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTLPSSSSSALPERYRDLMINPSSPI 557
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
FYP+DFE+DMNGK+YSWQG+AKLPFIDE +LL + +E TLTEEE RNS M D+L+
Sbjct: 558 LQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSATRTLEGTLTEEEQLRNSKMLDLLY 617
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP 776
V +H L I ++ L ++R + ++P SDGMNG++ + V SP
Sbjct: 618 VSRAHKLVPHILFYYQNYSHLPHQQRPVLP--IDPSASDGMNGFLWSYERNVFRTVVSSP 675
Query: 777 VASMEDIMGNQVL 789
+ ++DI NQVL
Sbjct: 676 IKGLQDIACNQVL 688
>gi|298204908|emb|CBI34215.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 295/414 (71%), Positives = 345/414 (83%), Gaps = 12/414 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA++YPL V DV+EEEP G +I D S+PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSE-GGAEI--DVSRPNPNGMEFDNLYLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+ +PAPTT+D+VF+ +FDYID LF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGT+FMAVLS+ALQYYIH
Sbjct: 118 AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN +PGW KVILSD+NVPGEGEHKIMSY+R QRNL G++PNTRHCLYGLDADLIML+
Sbjct: 178 RLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIMLS 237
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILRE++ PGQQ+KC+LCGQ GHLAA C G E D+ + KK
Sbjct: 238 LATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRGI---------EVVDDTPIHKK 288
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
YQFL+IW LREYL Y+ I NPPFEI+ E ++DDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 289 KYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGA 348
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
INLLM VY++EF A+GGYLTD + L RVEHFI++V YED+IFQKR R+ QR
Sbjct: 349 INLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQR 402
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/252 (57%), Positives = 182/252 (72%), Gaps = 2/252 (0%)
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+VKLGEPG+KERYY EKFN PEE ++ RK++V++Y EGLCWV YYY+GVCSWQW+YP
Sbjct: 670 QVKLGEPGYKERYYTEKFNLSNPEEIDKVRKEIVMKYVEGLCWVCRYYYQGVCSWQWYYP 729
Query: 598 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
+HYAPFASDLKDL I+F LG PFKPF+QL+G P+AS+ +LPE+YRKLMTD +SPI
Sbjct: 730 FHYAPFASDLKDLVDLEITFFLGEPFKPFDQLMGTLPAASASSLPENYRKLMTDQSSPIL 789
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP+DFE+DMNGKRY+WQG+AKLPFIDE +LL E KK+E TLT EE RNS+M D+L+V
Sbjct: 790 DFYPSDFEIDMNGKRYAWQGVAKLPFIDEEKLLAETKKLEVTLTVEEQVRNSVMFDLLYV 849
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV 777
HPL+ I + RV +N S GMNGY+ C + F S +
Sbjct: 850 HAVHPLATQIIYYYHFYQSSPPLARVIWPIDIN--ASGGMNGYLWLCERNGWRSEFPSSI 907
Query: 778 ASMEDIMGNQVL 789
+ +++I NQV
Sbjct: 908 SGLQNIEHNQVF 919
>gi|359487905|ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 950
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/436 (68%), Positives = 354/436 (81%), Gaps = 13/436 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA++YPL V DV+EEEP G +I D S+PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSE-GGAEI--DVSRPNPNGMEFDNLYLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+ +PAPTT+D+VF+ +FDYID LF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGT+FMAVLS+ALQYYIH
Sbjct: 118 AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN +PGW KVILSD+NVPGEGEHKIMSY+R QRNL G++PNTRHCLYGLDADLIML+
Sbjct: 178 RLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIMLS 237
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILRE++ PGQQ+KC+LCGQ GHLAA C G E D+ + KK
Sbjct: 238 LATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRGI---------EVVDDTPIHKK 288
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
YQFL+IW LREYL Y+ I NPPFEI+ E ++DDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 289 KYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGA 348
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLM VY++EF A+GGYLTD + L RVEHFI++V YED+IFQKR R+ Q+ E +
Sbjct: 349 INLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRI-QQALENNE 407
Query: 421 REKAQARRGDDVEPLA 436
K + +R EP A
Sbjct: 408 EMKLRTKREASEEPRA 423
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 155/281 (55%), Positives = 195/281 (69%), Gaps = 7/281 (2%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
EN EE K + K ++ A P EDKVKLGEPG+KERYY EKFN PEE ++ RK
Sbjct: 404 ENNEEMKLRTKREASEEPRA-----PVEDKVKLGEPGYKERYYTEKFNLSNPEEIDKVRK 458
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
++V++Y EGLCWV YYY+GVCSWQW+YP+HYAPFASDLKDL I+F LG PFKPF+Q
Sbjct: 459 EIVMKYVEGLCWVCRYYYQGVCSWQWYYPFHYAPFASDLKDLVDLEITFFLGEPFKPFDQ 518
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
L+G P+AS+ +LPE+YRKLMTD +SPI DFYP+DFE+DMNGKRY+WQG+AKLPFIDE +
Sbjct: 519 LMGTLPAASASSLPENYRKLMTDQSSPILDFYPSDFEIDMNGKRYAWQGVAKLPFIDEEK 578
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 748
LL E KK+E TLT EE RNS+M D+L+V HPL+ I + RV
Sbjct: 579 LLAETKKLEVTLTVEEQVRNSVMFDLLYVHAVHPLATQIIYYYHFYQSSPPLARVIWPID 638
Query: 749 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+N S GMNGY+ C + F S ++ +++I NQV
Sbjct: 639 IN--ASGGMNGYLWLCERNGWRSEFPSSISGLQNIEHNQVF 677
>gi|357441511|ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 1029
Score = 600 bits (1547), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/436 (68%), Positives = 354/436 (81%), Gaps = 8/436 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA++YPL ++DV+E+ D V P+D SKPNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSISDVVED-----DDVPSPIDASKPNPNGIEFDNLYLDMNGIIH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+ +P+P T+DEVF+ +FDY+D LF +VRPRKLLY+A DGVAPRAKMNQQRSRRFR
Sbjct: 56 PCFHPDGKPSPATYDEVFKLVFDYVDHLFSLVRPRKLLYLATDGVAPRAKMNQQRSRRFR 115
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+KDAA++ AEEERLR+EF EG L K + DSNVITPGT+FMA LS+ALQYY+
Sbjct: 116 AAKDAAEAEAEEERLRKEFVEEGALLSSKDKPETSDSNVITPGTKFMASLSVALQYYVQT 175
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN++P W+ IKVILSD+NVPGEGEHKIM Y+RLQRN+PG++PNTRHCLYGLDADLIML+
Sbjct: 176 RLNHNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNIPGFNPNTRHCLYGLDADLIMLS 235
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHEVHFSILREV+ PG QDKCF+CGQ GH AA+C GK + KA E DE+ + KK
Sbjct: 236 LATHEVHFSILREVITLPG-QDKCFVCGQAGHFAADCHGKPETKA-EDGNPADEIPIHKK 293
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
YQFL+IW LREYL YE IPNPPFEID E +VDDF+F+CFFVGNDFLPHMPTLEIREGA
Sbjct: 294 KYQFLNIWVLREYLQYELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 353
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
INLLM +Y+KEF A+GGYLT + L RVE+FIQ+V +ED+IFQKR R+ Q AE +
Sbjct: 354 INLLMHIYRKEFTAMGGYLTYAGEVFLDRVEYFIQSVAVHEDQIFQKRVRVQQV-AENNE 412
Query: 421 REKAQARRGDDVEPLA 436
+A+ R EP A
Sbjct: 413 EMRARVRGVILQEPRA 428
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 196/294 (66%), Gaps = 20/294 (6%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
EN EE +A+++ ++ + A SD KVKLGEPG+KERYY EKF A + EE ++ +K
Sbjct: 409 ENNEEMRARVRGVILQEPRASFSD-----KVKLGEPGYKERYYAEKFGASSLEEIDKVKK 463
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
D+VL+Y EGLCWV YYY GVCSW+W+YPYHYAPFASDLKDL I F G PFKPF+Q
Sbjct: 464 DIVLKYVEGLCWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLPNLEIIFSPGEPFKPFDQ 523
Query: 629 LLGVFPSAS-----------SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 677
L+GV P++ S+ALP+ YR LMTDP+SPI FYP DFE+DMNGKR++WQG
Sbjct: 524 LMGVLPASRFFLYHVLRSILSNALPDKYRDLMTDPSSPIFHFYPADFEIDMNGKRFAWQG 583
Query: 678 IAKLPFIDEARLLDEVKKIEHTLT--EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCK 735
+AKLPFIDE +LL +K+E TLT EEE RRNS+M D+L+V +H L++ I +
Sbjct: 584 VAKLPFIDEKKLLAATRKLEDTLTMQEEEQRRNSVMLDLLYVNRAHDLASHILLYYQVFG 643
Query: 736 QLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+L ER +N S GMNGY+ C + + SP+ + DI NQVL
Sbjct: 644 RLATHER--CVSPINANASGGMNGYLWACERNVLSSIAPSPIDGLPDIESNQVL 695
>gi|241954112|ref|XP_002419777.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
gi|223643118|emb|CAX41992.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
Length = 978
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/745 (43%), Positives = 449/745 (60%), Gaps = 50/745 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EEE I G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKY----ENPNPNG-ETDNLYLDMNGIVH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE + P T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A+KDA A + E +E E G + + +DSN ITPGT FM L+ AL+Y++
Sbjct: 116 AAKDAELKAKQLEIEVKERELRGEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVA 175
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L++DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P YDPNT+HC+YGLDADLI L
Sbjct: 176 YKLSSDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIFL 235
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP- 298
LATHE HF +LRE VF QDK F K + E + +VV
Sbjct: 236 GLATHEPHFRVLREDVF--ATQDKKFTI--------------KDQIAEANSNDGDVVAKD 279
Query: 299 -KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+KP+ +LH+ LREYL E P F +LE +DD++F+CFF GNDFLPH+P+L++R
Sbjct: 280 DRKPFLWLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVR 339
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
+ I+ L+ +K+ L Y+T K +L+ VE + + E IF+ + QR E
Sbjct: 340 DNGIDTLVQCWKRSLPILKDYVTCDGKLNLKSVEVLMSNLAYKESEIFKNKHAAEQRREE 399
Query: 418 RIKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRLA--SGPSPSPY 461
KR K +Q +G D PL D +P+ G + + S S
Sbjct: 400 NNKRRKLAQEQDRALKRIYSSQVSKGKDKAPLT-ADVNMPLMDTSGQIVEGYANLSNSDI 458
Query: 462 QQSECV---GRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL 518
Q+ + L N + + + T+ + ++S ++ ++ E +
Sbjct: 459 VQNRAILTKANLANSDAAAELKKLIDSKKTQVTVVQDQIATDSSANSETTTSESELEENQ 518
Query: 519 KE-LLRDKSDAFNSDN--PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 575
+ L+ K ++ DN + D +KL EPG+ +RYYE KF+ ++ EE E+T++DVV Y
Sbjct: 519 SDNSLKRKLESEEKDNKQTQSDDIKLWEPGYNKRYYEAKFHCQSDEEIEQTKRDVVRHYV 578
Query: 576 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHPFKPFNQLLGV 632
EG+ WV YYY+G SW W++PYHYAPFA+D +L++ + F+LG PF+PF QL+ V
Sbjct: 579 EGIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEELFPEGVKFKLGEPFRPFEQLMSV 638
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
P+AS H LP+ +R LM++P+S I DFYP +FE+DMNGK+ SWQGI LPFIDE RLLD
Sbjct: 639 LPAASGHTLPQVFRDLMSNPDSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDA 698
Query: 693 VKKIEHTLTEEEARRNSIMADMLFV 717
V+K LT +E RN+ LF+
Sbjct: 699 VQKKYELLTPDEISRNTNKEAELFI 723
>gi|356573066|ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 957
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 295/435 (67%), Positives = 346/435 (79%), Gaps = 13/435 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA++YPL + DV+EE+P VD SKPNP+G+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSITDVVEEDPSAG-----AVDVSKPNPSGMEFDNLYLDMNGIIH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+ +PAP T+++VF+ +FDYID +F +VRPRKLLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 56 PCFHPDGKPAPATYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFR 115
Query: 121 ASKDAADSAAEE-----ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
A+KDAA+ A E ERLR+EFE E + L K + +DSNVITPGT FM VLS+ALQ
Sbjct: 116 AAKDAAEKDAAEAEAEIERLREEFEGEMKLLSSKDKPETYDSNVITPGTPFMGVLSVALQ 175
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YYI RLN +PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG++PNTRHCLYGLDAD
Sbjct: 176 YYIQTRLNYNPGWWNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGLDAD 235
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML+LATHEVHFSILREV+ PGQQ+KCF CGQ GH AA C GK KA +++ D+
Sbjct: 236 LIMLSLATHEVHFSILREVITFPGQQEKCFQCGQLGHFAAECRGKPGEKAEDWNPV-DDT 294
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ KK YQFL+IW LREYL YE IPNPPFEID E IVDDF+F+CFFVGNDFLPHMPTLE
Sbjct: 295 PIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLE 354
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
IREGA+NLLM +Y+KEF A+GGYLT+ + L RVEHFIQ+V +ED+IFQKR R+ Q
Sbjct: 355 IREGALNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVRIQQ-- 412
Query: 416 AERIKREKAQARRGD 430
A I E RGD
Sbjct: 413 ATEINEEMKARARGD 427
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/253 (57%), Positives = 184/253 (72%), Gaps = 2/253 (0%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
DKVKLGEPG+KERYY EKF A PE+ ++ +KD VL+Y EGLCWV YYY+GVCSWQW+Y
Sbjct: 438 DKVKLGEPGYKERYYAEKFGALDPEKIDKIKKDTVLKYVEGLCWVCRYYYQGVCSWQWYY 497
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFASDLKDL I+F LG PFKPF+QL+G P++SS ALP+ YR LM DP+S I
Sbjct: 498 PYHYAPFASDLKDLADLEITFFLGEPFKPFDQLMGTLPASSSSALPKKYRDLMIDPSSSI 557
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
FYP DFE+DMNGKR++WQG+AKLPFIDE +LL K+E TLTEEE RNS M D+L+
Sbjct: 558 LQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEEQLRNSKMLDLLY 617
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSP 776
V +H L+ I + ++ QL + ER + ++P +SDGMNGY+ + + SP
Sbjct: 618 VSSAHNLAPHILSYYQYSCQLPLHER--PAQPIDPRVSDGMNGYLWLYERNVLRTIVSSP 675
Query: 777 VASMEDIMGNQVL 789
+ ++DI NQVL
Sbjct: 676 IKGLQDIEFNQVL 688
>gi|357512205|ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 629
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 299/438 (68%), Positives = 349/438 (79%), Gaps = 5/438 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEE--EPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVPAFYRWLA++YP + DV+EE P V G PVD S+PNPNG+E+DNLYLDMNGI
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCFHP+ +PAP T+D+VF+ MFDYID LF +VRPRKLLY+AIDGVAPRAKMNQQRSRR
Sbjct: 61 IHPCFHPDGKPAPATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+KDAA++ AEEERLR EF + L K ++ DSNVITPGT FMAVLS+ALQYYI
Sbjct: 121 FRAAKDAAEAEAEEERLRNEFADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
RLN +PGW KV+LSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLYGLDADLIM
Sbjct: 181 QTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGLDADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+LATHE+HFSILREV+ PGQQ+KC++CGQ GHLAA C GK A D D+ +
Sbjct: 241 LSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNA--LDWPVDDTPIH 298
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KK YQFLHIW LREYL YE IP+PPFEID E IVDDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 299 KKKYQFLHIWVLREYLQYELLIPDPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 358
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA+NLLM +Y+KEF A+GGYLTD + L RVE+FIQ V +E++IFQKR R+ Q E
Sbjct: 359 GAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQ-EF 417
Query: 419 IKREKAQARRGDDVEPLA 436
+ +A+AR EP A
Sbjct: 418 NEGMRARARGEMPEEPRA 435
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 133/165 (80%), Gaps = 1/165 (0%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
DKVKLG+PG+ ERYY EKF A PE E +KD+VL+Y EGLCWV YYY+GVCSWQW+Y
Sbjct: 439 DKVKLGQPGYTERYYAEKFGASDPE-IERIKKDIVLKYVEGLCWVCRYYYQGVCSWQWYY 497
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFASDLKDL I+F +G PF+PF+QL+G PS+SS ALPE YR LM +P+SPI
Sbjct: 498 PYHYAPFASDLKDLADLEITFFMGEPFRPFDQLMGTLPSSSSSALPERYRDLMINPSSPI 557
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 701
FYP+DFE+DMNGK+YSWQG+AKLPFIDE +LL + +E TLT
Sbjct: 558 LQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSATRTLEGTLT 602
>gi|108711532|gb|ABF99327.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 682
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 301/432 (69%), Positives = 357/432 (82%), Gaps = 6/432 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP V+D +EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +F YID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+ + + K
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADKTVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR+ +
Sbjct: 356 AINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNE 415
Query: 420 KREKAQARRGDD 431
+R + Q +D
Sbjct: 416 ERNRVQTENSED 427
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 185/269 (68%), Gaps = 5/269 (1%)
Query: 523 RDKSDAFNS-DNPEEDKVKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCW 580
R++ NS DN DKVKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCW
Sbjct: 417 RNRVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCW 476
Query: 581 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 640
VM YYY+GVCSWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+A
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNA 536
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP++Y LM DPNSP+ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TL
Sbjct: 537 LPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETL 596
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
T+EE RN M D+L+V +HPL+A I L + C Q ++P S GMNG+
Sbjct: 597 TDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGF 653
Query: 761 ISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ + + V SPV I N+VL
Sbjct: 654 LCLSERNCYSIVVTSPVKGFNGIAQNRVL 682
>gi|125588231|gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
Length = 997
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 301/432 (69%), Positives = 357/432 (82%), Gaps = 6/432 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP V+D +EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +F YID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+ + + K
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADKTVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR+ +
Sbjct: 356 AINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNE 415
Query: 420 KREKAQARRGDD 431
+R + Q +D
Sbjct: 416 ERNRVQTENSED 427
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/252 (55%), Positives = 176/252 (69%), Gaps = 4/252 (1%)
Query: 539 VKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
VKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCWVM YYY+GVCSWQWFYP
Sbjct: 443 VKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYP 502
Query: 598 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
YHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LM DPNSP+
Sbjct: 503 YHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSPLK 562
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TLT+EE RN M D+L+V
Sbjct: 563 SFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYV 622
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV 777
+HPL+A I L + C Q ++P S GMNG++ + + V SPV
Sbjct: 623 RETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGFLCLSERNCYSIVVTSPV 679
Query: 778 ASMEDIMGNQVL 789
I N+VL
Sbjct: 680 KGFNGIAQNRVL 691
>gi|125546024|gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indica Group]
Length = 997
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 301/432 (69%), Positives = 357/432 (82%), Gaps = 6/432 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP V+D +EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +F YID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+ + + K
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADKTVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR+ +
Sbjct: 356 AINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNE 415
Query: 420 KREKAQARRGDD 431
+R + Q +D
Sbjct: 416 ERNRVQTENSED 427
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 138/252 (54%), Positives = 175/252 (69%), Gaps = 4/252 (1%)
Query: 539 VKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
VKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCWVM YYY+GVCSWQWFYP
Sbjct: 443 VKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYP 502
Query: 598 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
YHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LM DPNSP+
Sbjct: 503 YHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSPLK 562
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TLT+EE RN M D+L+V
Sbjct: 563 SFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYV 622
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV 777
+HPL+A I L + C Q ++P S GMNG++ + + SPV
Sbjct: 623 RETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGFLCLSERNCYSIAVTSPV 679
Query: 778 ASMEDIMGNQVL 789
I N+VL
Sbjct: 680 KGFNGIAQNRVL 691
>gi|448107650|ref|XP_004205418.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|448110652|ref|XP_004201682.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359382473|emb|CCE81310.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359383238|emb|CCE80545.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
Length = 993
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 329/816 (40%), Positives = 481/816 (58%), Gaps = 75/816 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIE+E +D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEDE---LDEEYGGSRYTDPNPNG-EIDNLYLDMNGIVH 56
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 57 PCSHPEHKPPPETEDEMFLDVFKYTDRVLMMARPRKVLVIAVDGVAPRAKMNQQRSRRFR 116
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA + E+ER E E G + + +DSN ITPGT FM L++AL+Y++
Sbjct: 117 SAQDAKIAHEEKERQINERELRGEMIDEAIKGKKSWDSNAITPGTPFMDRLALALRYWVA 176
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L+ +PGW ++VI+SDA VPGEGEHK+MS++R QR+ P Y+PNT HC+YGLDADLI L
Sbjct: 177 YKLSTEPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYNPNTSHCIYGLDADLIFL 236
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF +LRE VF Q + ++ + + K+K +
Sbjct: 237 GLATHEPHFRVLREDVFA--NQSRQLRVSDQLSMSEDQKDALKKKE------------ER 282
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL+ E P F DLE +DD++F+CFF GNDFLPH+P+L++R+
Sbjct: 283 KPFLWLHLNVLREYLEIELYNPYISFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDN 342
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
I+ L+ +K+ L Y+T +L VE ++ + S ED IF++ +H + +
Sbjct: 343 GIDNLVRCWKRILPKLSDYITCDGNLNLESVEKLLEGLASKEDEIFRR------KHEQEL 396
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY-------------QQSEC 466
++E+ + RR + + D + + + S+++ G +P + +
Sbjct: 397 RQEENERRRKETL------DEEKALKKRYVSQISKGHDKAPLYADVNMPLLTTSGENVDG 450
Query: 467 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 526
+L N + R + A A+ + +S E + + L + + KS
Sbjct: 451 FAQLSNKDIVANRDIITKANMANANAAEALKKLLDSKSNKANEGQISASSALNQEIDSKS 510
Query: 527 DAFNSDNP-----------------EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKD 569
+ N DN + DK+++ EPG++ERYY+ KF+ + E+ ++ RKD
Sbjct: 511 ETENGDNNRKRGFDEVQSDSDDQRLDNDKIRMWEPGYRERYYKSKFHITSEEDIDKVRKD 570
Query: 570 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF----NISFELGHPFKP 625
+V Y EG+ WV+ YYY+G SWQW+YPYHYAPFA+D K++ + I+F+LG PF+P
Sbjct: 571 MVKHYLEGISWVLLYYYQGCPSWQWYYPYHYAPFAADFKNIREIVGEEGITFKLGQPFRP 630
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
+ QL+ V P+AS H LPE +RKLM+DP S I DFYP +FE+DMNGK+ SWQGIA LPFID
Sbjct: 631 YEQLMSVLPAASGHNLPEVFRKLMSDPESEIIDFYPEEFEIDMNGKKMSWQGIALLPFID 690
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEV 745
E RLL+ V+K LTE E RN++ ++L + H + + CK+L K + EV
Sbjct: 691 EKRLLEAVQKKYELLTEAEKERNTLKDEVLIISKQHKMYETF------CKELYEKSQNEV 744
Query: 746 KERLNPELSDGMNGYISPCAGDPHPPVFRSPVASME 781
+ G+ G + A D + VF+ P+ E
Sbjct: 745 EFSFG---KTGLAGGVRKAAFDIN-GVFKYPLNQGE 776
>gi|115455883|ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group]
gi|50400038|gb|AAT76426.1| putative 5'-3' exonuclease [Oryza sativa Japonica Group]
gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa Japonica Group]
Length = 988
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 301/432 (69%), Positives = 357/432 (82%), Gaps = 6/432 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP V+D +EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +F YID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+ + + K
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADKTVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR+ +
Sbjct: 356 AINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNE 415
Query: 420 KREKAQARRGDD 431
+R + Q +D
Sbjct: 416 ERNRVQTENSED 427
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 185/269 (68%), Gaps = 5/269 (1%)
Query: 523 RDKSDAFNS-DNPEEDKVKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCW 580
R++ NS DN DKVKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCW
Sbjct: 417 RNRVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCW 476
Query: 581 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 640
VM YYY+GVCSWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+A
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNA 536
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP++Y LM DPNSP+ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TL
Sbjct: 537 LPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETL 596
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
T+EE RN M D+L+V +HPL+A I L + C Q ++P S GMNG+
Sbjct: 597 TDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGF 653
Query: 761 ISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ + + V SPV I N+VL
Sbjct: 654 LCLSERNCYSIVVTSPVKGFNGIAQNRVL 682
>gi|108711533|gb|ABF99328.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 718
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 301/432 (69%), Positives = 357/432 (82%), Gaps = 6/432 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP V+D +EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +F YID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT FM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ PGW+ +KV+LSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G +G+ D+ + + K
Sbjct: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADKTVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL+ + I +PPF+I+ E +VDDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM +Y++EF ++GGYLTDG + L RVEHFIQ+V +E++IFQKRAR+ +
Sbjct: 356 AINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNE 415
Query: 420 KREKAQARRGDD 431
+R + Q +D
Sbjct: 416 ERNRVQTENSED 427
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 185/269 (68%), Gaps = 5/269 (1%)
Query: 523 RDKSDAFNS-DNPEEDKVKLGEPGWKERYYEEKFNAKTP-EEREETRKDVVLRYTEGLCW 580
R++ NS DN DKVKLGEPG++ RYY EKF + + ++ ++DVV +Y EGLCW
Sbjct: 417 RNRVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCW 476
Query: 581 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHA 640
VM YYY+GVCSWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+A
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNA 536
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP++Y LM DPNSP+ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TL
Sbjct: 537 LPKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETL 596
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
T+EE RN M D+L+V +HPL+A I L + C Q ++P S GMNG+
Sbjct: 597 TDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGF 653
Query: 761 ISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ + + V SPV I N+VL
Sbjct: 654 LCLSERNCYSIVVTSPVKGFNGIAQNRVL 682
>gi|307183882|gb|EFN70493.1| 5'-3' exoribonuclease 2-like protein [Camponotus floridanus]
Length = 630
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 319/654 (48%), Positives = 410/654 (62%), Gaps = 32/654 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + IE++ + DGV IPV+++ PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKTISADGVCIPVNSADPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ + +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ + E +R+R E +G LPP K + FDSN ITPGT FMA LS L YYIH
Sbjct: 121 ASKETTEKINEIQRIRSELANKGAPLPPEKPKEEHFDSNCITPGTPFMARLSACLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN DPGW IKVILSDANVPGEGEHKIM ++R QR+ P +DPNT+H L G DADLIML
Sbjct: 181 ERLNKDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH C G + E + G E
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPKPCDICGQLGHEMRECTGAEPNQGQEENAFGSEC---- 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ + LREYL+ E +PN PF+ D E VDD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 296 -QYIFVRLNILREYLERELYMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+A+YKK GG+LTD +L RV+ + +G ED IF+KR Q
Sbjct: 355 AIDRLVALYKKAVYKTGGFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKR---QQNELAFK 411
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+REK + RR + + +P +F + L P + E G+ +
Sbjct: 412 QREKDKKRRQEIISNFKP--KWIPAGQFAPTALGQTVKPIENARYEAYQMRVQGRNYN-- 467
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
T A ++ E + K K++E S + D D+V
Sbjct: 468 -----------TNAGENTNANHALEIMLRPEIPGQKRKIEE----TSVDDDDDEQSHDEV 512
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+L E G+K+RYYE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++PYH
Sbjct: 513 RLWEDGFKDRYYESKFDVSP--DNLAFRNNVALQYVRGLCWVLRYYYQGCASWRWYFPYH 570
Query: 600 YAPFASDLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
YAPFASD ++ + FE PF+P QL+GVFP+AS +P + KLMTDP
Sbjct: 571 YAPFASDFINIGGLSTEFEKDTVPFRPLEQLMGVFPAASKKHVPAPWAKLMTDP 624
>gi|242037819|ref|XP_002466304.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
gi|241920158|gb|EER93302.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
Length = 990
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 306/444 (68%), Positives = 359/444 (80%), Gaps = 11/444 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YPL V+D EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +F YID LF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFYYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGT+FM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTQFMFVLSTALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ GW+ +K+ILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
ALATHEVHFSILREV+ PGQQ+KCFLCGQ GHLAA C G ++ D + + K
Sbjct: 241 ALATHEVHFSILREVISMPGQQEKCFLCGQAGHLAAECRGPSQP-----DNSVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL + I + PF+I+ E ++DDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLAKDLEIVDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ-----R 414
AINLLM++Y+ EF ++GGYLTDG + L RVEHFIQ+V E++IFQKRAR+ Q
Sbjct: 356 AINLLMSIYRSEFTSMGGYLTDGGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNE 415
Query: 415 HAERIKREKAQARRGDDVEPLAQP 438
RI+RE ++ + D L +P
Sbjct: 416 EKHRIQRENSEENQYVDKVKLGEP 439
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/259 (54%), Positives = 183/259 (70%), Gaps = 3/259 (1%)
Query: 532 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEER-EETRKDVVLRYTEGLCWVMHYYYEGVC 590
+N DKVKLGEPG++ERYY EKF + + ++ R+DVV +Y EGLCWVM YYY+GVC
Sbjct: 427 ENQYVDKVKLGEPGYRERYYAEKFKEEAESKPIDQVRRDVVQKYVEGLCWVMRYYYQGVC 486
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LMT
Sbjct: 487 SWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMT 546
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
DP+SP+ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E +LTEEE RN
Sbjct: 547 DPDSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDEMRLLAETRKLEDSLTEEERFRNRT 606
Query: 711 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP 770
M D+++V +HPLS+ I L ++ L + + + P +S GMNG++ + +
Sbjct: 607 MFDIIYVRDTHPLSSQIMFLYQNYYHLSRTDPYVIP--IQPAVSGGMNGFLCLSERNWYI 664
Query: 771 PVFRSPVASMEDIMGNQVL 789
SPV I N+VL
Sbjct: 665 VTVTSPVRGFNGIAQNRVL 683
>gi|148696566|gb|EDL28513.1| 5'-3' exoribonuclease 2, isoform CRA_a [Mus musculus]
Length = 915
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 344/767 (44%), Positives = 450/767 (58%), Gaps = 85/767 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRV---EHFIQAVGSYEDRIFQKRARLHQRHAE 417
I+ L+ +YK G K +R+ + G R + A
Sbjct: 360 IDRLVNIYKNVVHKTGDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPGCQVAS 419
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
++ + R + P P+ + AS SPSP
Sbjct: 420 NPRQAAYEMRMQRNSSPSISPN----------TSFASDGSPSP----------------- 452
Query: 478 GRPHKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
+G +AE+S E +P++N ++A K+ R + F+ D +E
Sbjct: 453 --------------LGGIKRKAEDSDSEPEPEDNVRLWEAGWKQ--RYYKNKFDVDAADE 496
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
KF K + E V+ Y +G C +YY
Sbjct: 497 -----------------KFRRKVVQSYVEGLCWVLRYYYQG-CASWKWYY---------- 528
Query: 597 PYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
P+HYAPFASD + + + FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S
Sbjct: 529 PFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNFLPPTWRKLMSDPDSS 588
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+L
Sbjct: 589 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVL 648
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
FV HPL I L Q E V+V PEL G+ G S
Sbjct: 649 FVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGTFS 687
>gi|294657829|ref|XP_460123.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
gi|218512153|sp|Q6BNU7.4|XRN2_DEBHA RecName: Full=5'-3' exoribonuclease 2
gi|199432980|emb|CAG88393.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
Length = 1003
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/771 (42%), Positives = 455/771 (59%), Gaps = 56/771 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+E++ G S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEDDVTQEIGA---AQFSDPNPNG-ELDNLYLDMNGIVH 56
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE + P T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 57 PCSHPEHKLPPETEDEMFLDVFKYTDRVLLMARPRKVLMIAVDGVAPRAKMNQQRSRRFR 116
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA + E+ER +E E G + + +DSN ITPGT FM L+ AL+Y++
Sbjct: 117 SAQDAKIAHEEKERQIRERESRGESIDDAIKGKKSWDSNAITPGTPFMDSLAQALRYWVA 176
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P YDPNT+HC+YGLDADLI L
Sbjct: 177 YKLATDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYDPNTKHCIYGLDADLIFL 236
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF +LRE VF Q + + Q + A++ A K
Sbjct: 237 GLATHEPHFRVLREDVFA-NQSRQMRISDQLSMTQDQKDSIAEQDA-------------K 282
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL+ E P+ F DLE +DD++FMCFFVGNDFLPH+P+L++R+
Sbjct: 283 KPFLWLHVNVLREYLEIELYNPHLSFPFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRDN 342
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
I++L+ +K+ L Y+T +L VE + ++ ED IF+KR +R E
Sbjct: 343 GIDILVNCWKRMLPKLRDYITCDGNLNLESVEKLLSSLSYKEDEIFRKRHEGEKRREEND 402
Query: 420 KREKA--------------QARRGDDVEPLAQPDSLVPVSRFHGSRL---ASGPSPSPYQ 462
KR K Q +G D PL D +P+ G + A + +
Sbjct: 403 KRRKLAQEEEKALKNQYIPQVSKGSDKAPLT-ADINMPLLSTSGDAVEGYAQLSNKDIVE 461
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLS-------SGATIGAAIVEAENSFETDPQENKEEFK 515
+ + + + + K S + AAI E +N + + EN ++
Sbjct: 462 NRDVITKANMSNADAAAALKKLLDSKNNKESDKNVSASAAIQEQQNKSDINTTENSKKRP 521
Query: 516 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 575
E K D D V++ EPG+++RYY+ KF + EE + R+D+V Y
Sbjct: 522 IDQVEAELPKPDE------NGDSVRMWEPGYRQRYYQSKFGVVSEEEINKIRRDMVRCYL 575
Query: 576 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF----NISFELGHPFKPFNQLLG 631
EG+ WV+ YYY+G SWQW+YPYHYAPFA+D +++ I F LG PFKP+ QL+
Sbjct: 576 EGISWVLLYYYQGCPSWQWYYPYHYAPFAADFVNINDIIGEQGIKFTLGEPFKPYEQLMS 635
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P+AS H LPE R LM+DP+S I DFYP +F++DMNGK+ SWQGIA LPFIDE RLL+
Sbjct: 636 VLPAASGHNLPEVLRILMSDPSSEILDFYPEEFQIDMNGKKMSWQGIALLPFIDENRLLE 695
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT--LDEHCKQLKIK 740
++K H LT++E RN++ ++LF+ + Y D + K+LK +
Sbjct: 696 ALEKRYHLLTDDERERNTLKNEVLFISNQNKNYKRFYNELYDNNVKELKFR 746
>gi|385303464|gb|EIF47537.1| 5 -3 exoribonuclease 2 [Dekkera bruxellensis AWRI1499]
Length = 1025
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 316/746 (42%), Positives = 461/746 (61%), Gaps = 49/746 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RWL+ KYP +++ VIE++PV++ G++ P+D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSLFRWLSRKYPKIISPVIEDDPVIVGGIEQPLDYSAXNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP + DE+ +F+Y +R+ M RPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPAPESEDEMMLAVFEYTNRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA S E ER +E E G + + +DSN ITPGT FM +L+ +L++++
Sbjct: 120 SARDAEISNEERERKMEEMEGRGEVIDESIRHKKTWDSNAITPGTPFMDILAESLRFWVA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L NDPGW K++VI+SD++VPGEGEHKIM+++R QR+ P Y+PNT HC+YGLDADLI L
Sbjct: 180 YKLANDPGWSKLQVIISDSSVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQ-QDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
+LATHE HF +LRE V+ Q Q K Q G + + + + E++
Sbjct: 240 SLATHEPHFRVLREDVYAKDQLQRKLRNMDQFG-----IDQQTRNQI--------ELIDK 286
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKP+ +LHI LREYL E IP F+ DLE +DD++FMCFF GNDFLPH+P L++R+
Sbjct: 287 KKPFIWLHIGILREYLAVELSIPRLSFKFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRD 346
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
+I+ L++++K+ L GY+T + L VE ++ +G ED I K+ +R +
Sbjct: 347 SSIDTLVSIWKRIMPRLKGYITCDGQLDLAGVEALLEELGRMEDTILYKKHEKDRRREDN 406
Query: 419 IKREKAQ--------------ARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 464
KR K + +G D P+ P + ++ + +++ G S +
Sbjct: 407 YKRRKIEKDQRSLIKNELLKTVSKGKDNAPIM-PSQNMTLTNLNTGKMSGGLKMS---NN 462
Query: 465 ECVGRLDN-GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 523
E V ++ K S L I A + ++ ET + E A + R
Sbjct: 463 EIVQNINTISKANSANQSVADXLRQ--NIANANLTQKDDAETKXYSSSEPIDASTTDDSR 520
Query: 524 DKS--DAFNSDNPE----------EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 571
++ AF+ D E +D +++ EPG+++RYY+ KF+ + E+ E+ +++V
Sbjct: 521 KRNTDSAFSXDTEESTSGALVDNNDDVIRMWEPGFRKRYYQAKFHTQDEEQLEQICRNMV 580
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
Y EG+ WV+ YYY+G SW W+YP+HYAPFA D K+L +++FE G PFK F QL+
Sbjct: 581 KGYVEGISWVLLYYYQGCPSWNWYYPFHYAPFALDFKNLTDIDVTFERGXPFKXFEQLMS 640
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P+AS H LP+ + LM D +S I DFYP +F+VDMNG + SWQGI+ LPFIDE RLL
Sbjct: 641 VLPAASKHNLPDVFGPLMCDEDSEIIDFYPKEFQVDMNGAKMSWQGISLLPFIDEKRLLK 700
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFV 717
V+ +LT EE RN++ ++L +
Sbjct: 701 AVRSKYGSLTPEEVERNTLKHEILLI 726
>gi|293333211|ref|NP_001170327.1| uncharacterized protein LOC100384297 [Zea mays]
gi|224035107|gb|ACN36629.1| unknown [Zea mays]
gi|413932823|gb|AFW67374.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 490
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/444 (68%), Positives = 358/444 (80%), Gaps = 11/444 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YPL V+D EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +FDYID LF ++RPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGTEFM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ GW+ +K+ILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
ALATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G ++ D + + K
Sbjct: 241 ALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQP-----DNSVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL + I + PF+I+ E ++DDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ-----R 414
AINLLM++Y+ EF ++GGYLTD + L RVEHFIQ+V E++IFQKRAR+ Q
Sbjct: 356 AINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNE 415
Query: 415 HAERIKREKAQARRGDDVEPLAQP 438
+++RE ++ + D L +P
Sbjct: 416 EKHKMQRENSEEDQYVDKVKLGEP 439
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 492 IGAAIVEAENSFETDPQENKEEF---KAKLKELLRDKSDA--FNSDNPEED----KVKLG 542
+G I++ F N+E+ +A++++ + + +N EED KVKLG
Sbjct: 378 VGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHKMQRENSEEDQYVDKVKLG 437
Query: 543 EPGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
EPG++ERYY +KF + + + R+DVV +Y EGLCWVM YYY+GVCSWQW
Sbjct: 438 EPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQW 490
>gi|413932824|gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 652
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/444 (68%), Positives = 358/444 (80%), Gaps = 11/444 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YPL V+D EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +FDYID LF ++RPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGTEFM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ GW+ +K+ILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
ALATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G ++ D + + K
Sbjct: 241 ALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQP-----DNSVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL + I + PF+I+ E ++DDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ-----R 414
AINLLM++Y+ EF ++GGYLTD + L RVEHFIQ+V E++IFQKRAR+ Q
Sbjct: 356 AINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNE 415
Query: 415 HAERIKREKAQARRGDDVEPLAQP 438
+++RE ++ + D L +P
Sbjct: 416 EKHKMQRENSEEDQYVDKVKLGEP 439
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/256 (51%), Positives = 178/256 (69%), Gaps = 10/256 (3%)
Query: 492 IGAAIVEAENSFETDPQENKEEF---KAKLKELLRDKSDA--FNSDNPEED----KVKLG 542
+G I++ F N+E+ +A++++ + + +N EED KVKLG
Sbjct: 378 VGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHKMQRENSEEDQYVDKVKLG 437
Query: 543 EPGWKERYYEEKFNAKTPEE-REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
EPG++ERYY +KF + + + R+DVV +Y EGLCWVM YYY+GVCSWQWFYPYHYA
Sbjct: 438 EPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYA 497
Query: 602 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
PFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LM+DP+SP+ FYP
Sbjct: 498 PFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMSDPDSPLKSFYP 557
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 721
DFE+DMNGKR++WQG+AKLPFIDE RLL E +K+E TLTEEE RN M D+++V +H
Sbjct: 558 KDFEIDMNGKRFAWQGVAKLPFIDERRLLAETRKLEDTLTEEEKFRNRTMLDIIYVRDTH 617
Query: 722 PLSASIYTLDEHCKQL 737
PL I L ++ L
Sbjct: 618 PLITQIIFLYQNYYHL 633
>gi|224123332|ref|XP_002319052.1| predicted protein [Populus trichocarpa]
gi|222857428|gb|EEE94975.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 295/429 (68%), Positives = 345/429 (80%), Gaps = 3/429 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVV-IDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYR LA++YPL ++DVIEEEP +G P+D SKPNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRLLADRYPLSISDVIEEEPQEDSNGNSKPIDVSKPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE +PAP T+D+VF+ +F YID LF +VRPRKLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSIFAYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAA + AEEERLR+EFE EG L K + FDSNVITPGT+FMA LS ALQYYI
Sbjct: 121 RAAKDAAQAEAEEERLRKEFEAEGELLSVKEKPETFDSNVITPGTQFMAALSTALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN++ GW+ KVILSD+NVPGEGEHKIMSY+RLQRNL G++PNTRHCLY LDADLIML
Sbjct: 181 SRLNHNLGWQNTKVILSDSNVPGEGEHKIMSYIRLQRNLSGFNPNTRHCLYSLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+LAT EVHFSILRE+V PGQQDKCFLCGQ GHLAA C GK A ++ D+ + K
Sbjct: 241 SLATREVHFSILREIVTLPGQQDKCFLCGQAGHLAAECRGKQGDDALDW-HVVDDTPIHK 299
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL Y+ I NPPF ID E IVDDF+F+CFFVGNDFLPHMPTLEIREG
Sbjct: 300 KKYQFLNIWVLREYLQYDLDILNPPFAIDFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+LLM +Y++EF A+GGYLT + L +VEHFIQ V YE++IFQKR R+ Q +
Sbjct: 360 AISLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQCVAVYEEQIFQKRTRIQQAF-DNN 418
Query: 420 KREKAQARR 428
+ K +ARR
Sbjct: 419 EEMKLKARR 427
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/281 (53%), Positives = 197/281 (70%), Gaps = 7/281 (2%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
+N EE K K + R+ S+ + P DKVKLGEPG+KERYY EKF EE ++ RK
Sbjct: 416 DNNEEMKLKAR---RESSEVIQA--PVVDKVKLGEPGYKERYYAEKFELSNQEEIDKVRK 470
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
+VVL+Y EGLCWV HYY++GVCSWQWFYP+HYAPFASDLKDL + ++F +G PFKPF+Q
Sbjct: 471 EVVLKYVEGLCWVCHYYFQGVCSWQWFYPFHYAPFASDLKDLGEVELNFFIGEPFKPFDQ 530
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
L+G P+ASS+ALP+ YRKLMT+P+SPI F+P+DFE+DMNGKR++WQGIAKLPFIDE +
Sbjct: 531 LMGTLPAASSNALPKEYRKLMTNPSSPIHRFFPSDFEIDMNGKRFAWQGIAKLPFIDERK 590
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKER 748
LL + KK+E TLTEEE RN +M D+L++ HPL+ + + + L ER +
Sbjct: 591 LLAQTKKLESTLTEEEQIRNRVMLDLLYIHPVHPLAQLVISYYQQNDHLSEGERFAWE-- 648
Query: 749 LNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
++ S GMNG + + V SP+ + + GNQVL
Sbjct: 649 IDTRASGGMNGCLWLYERNVRRSVVPSPILGLPVLEGNQVL 689
>gi|413932825|gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 990
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 300/426 (70%), Positives = 350/426 (82%), Gaps = 6/426 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YPL V+D EEEPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RPAPTT+DEVF+ +FDYID LF ++RPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR+EFE EGR L K S+ DSNVITPGTEFM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTEFMFVLSTALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ GW+ +K+ILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 LRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
ALATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C G ++ D + + K
Sbjct: 241 ALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRGPSQP-----DNSVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL + I + PF+I+ E ++DDF+FMCFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM++Y+ EF ++GGYLTD + L RVEHFIQ+V E++IFQKRAR+ Q
Sbjct: 356 AINLLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNE 415
Query: 420 KREKAQ 425
++ K Q
Sbjct: 416 EKHKMQ 421
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 200/312 (64%), Gaps = 20/312 (6%)
Query: 492 IGAAIVEAENSFETDPQENKEEF---KAKLKELLRDKSDA--FNSDNPEED----KVKLG 542
+G I++ F N+E+ +A++++ + + +N EED KVKLG
Sbjct: 378 VGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKHKMQRENSEEDQYVDKVKLG 437
Query: 543 EPGWKERYYEEKFNAKTPEERE-----ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
EPG++ERYY +KF EE E + R+DVV +Y EGLCWVM YYY+GVCSWQWFYP
Sbjct: 438 EPGYRERYYADKFK----EEAESKPIVQVRRDVVQKYVEGLCWVMRYYYQGVCSWQWFYP 493
Query: 598 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
YHYAPFASDLK L + I+F LG PFKPF+QL+G P+ASS+ALP++Y LM+DP+SP+
Sbjct: 494 YHYAPFASDLKGLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMSDPDSPLK 553
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
FYP DFE+DMNGKR++WQG+AKLPFIDE RLL E +K+E TLTEEE RN M D+++V
Sbjct: 554 SFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLLAETRKLEDTLTEEEKFRNRTMLDIIYV 613
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPV 777
+HPL I L ++ L + + + P S GMNG++ + + SPV
Sbjct: 614 RDTHPLITQIIFLYQNYYHLSRTDPYVIP--IEPAASGGMNGFLCLSERNWYSVTVTSPV 671
Query: 778 ASMEDIMGNQVL 789
I N+VL
Sbjct: 672 KGFNGIAQNRVL 683
>gi|326494150|dbj|BAJ85609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1014
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/427 (70%), Positives = 352/427 (82%), Gaps = 6/427 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP V+D E+EPV ++ G +PVD +PNPNGLE+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAEEKEPVELEPGAFVPVDPRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE RP+PTT+DEVF+ +FDYID LF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPSPTTYDEVFKSIFDYIDHLFCLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAAD+AAEEERLR EFE EGR L K S+ DSNVITPGT FM VLS ALQYYI
Sbjct: 121 RAAKDAADAAAEEERLRLEFEAEGRNLVRKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
LRLN+ PGW+ +KVILSD+NVPGEGEHKIMSY+RLQRNLPG+DPNTRH LYGLDADLIML
Sbjct: 181 LRLNHSPGWQSVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHVLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
ALATHEVHFSILREV+ PGQ +KCFLCGQ GHLAA C+G G D + + K
Sbjct: 241 ALATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECQG-----PGPADNVVELPPIHK 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
K YQFL+IW LREYL+ + I +PPF+I+LE I+DDF+F+CFFVGNDFLPHMPTLEIREG
Sbjct: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINLERILDDFVFLCFFVGNDFLPHMPTLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AINLLM +Y+ EF+ +GGYLTDG + L RVEHFIQAV +E++IF+KRAR+ + +
Sbjct: 356 AINLLMNIYRAEFKPMGGYLTDGGEVLLERVEHFIQAVAIHEEQIFRKRARIQKAYENNE 415
Query: 420 KREKAQA 426
R +AQ
Sbjct: 416 DRRRAQG 422
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/268 (54%), Positives = 186/268 (69%), Gaps = 2/268 (0%)
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEER-EETRKDVVLRYTEGLCWV 581
R + +N D VKLGEPG++ERYY EKF + + ++ ++DVV +Y EGLCWV
Sbjct: 418 RRAQGDISEENQYVDMVKLGEPGFRERYYAEKFREEAESKPIDQVQRDVVQKYVEGLCWV 477
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHAL 641
M YYY+GVCSWQWFYPYHYAPFASDLK L +F I+F LG PFKPF+QL+G P+ASS+AL
Sbjct: 478 MRYYYQGVCSWQWFYPYHYAPFASDLKSLTEFEITFFLGQPFKPFDQLMGTLPAASSNAL 537
Query: 642 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 701
P+HY LMTDPNSP++ FYP DFE+DMNGKR++WQGIAKLPFIDE RLL E +K+E TLT
Sbjct: 538 PKHYGDLMTDPNSPLNYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEDTLT 597
Query: 702 EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
EEE RN+ M D+++V +HPLSA I L + Q I + ++P S GMNG++
Sbjct: 598 EEERFRNTTMFDIIYVRETHPLSAHIALLYQMYSQQMITDPSYCLP-IDPAASGGMNGFL 656
Query: 762 SPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ + SPV I N+VL
Sbjct: 657 CLSQRNWYSISVESPVKGFNGITNNRVL 684
>gi|194382024|dbj|BAG64381.1| unnamed protein product [Homo sapiens]
Length = 874
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 332/717 (46%), Positives = 437/717 (60%), Gaps = 52/717 (7%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
+G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPN 182
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+ + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 439
T+ +L+RV+ + AVG ED IF+KR R K ++ + +R +P P
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPS 359
Query: 440 SLVPVSRF-----HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGA 494
++ GS++AS P + Y+ R+ N S P+
Sbjct: 360 GILTPHALGSRNSSGSQVASNPRQAAYEM-----RMQNNSSPSISPN------------- 401
Query: 495 AIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEK 554
SF +D + L + R D+ + P ED V+L E GWK+RYY+ K
Sbjct: 402 ------TSFTSDGS------PSPLGGIKRKAEDSDSEPEP-EDNVRLWEAGWKQRYYKNK 448
Query: 555 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 614
F+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 449 FDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMP 506
Query: 615 ISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y
Sbjct: 507 SDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKY 566
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 567 AWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL--- 623
Query: 734 CKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
Q E VEV PEL G+ G S P + SPV + D+ N V+
Sbjct: 624 -YQTGSTEPVEVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 675
>gi|401623665|gb|EJS41757.1| rat1p [Saccharomyces arboricola H-6]
Length = 1006
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 342/833 (41%), Positives = 470/833 (56%), Gaps = 94/833 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P V+DGV +P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQVVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDA-ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA ++ A EE +RQ E + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQVENEAREEVMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + + N + K +F +K + +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNIKD-----TMNMTEEEK----QFLQKQNS----E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T +L VE +Q +GS E IF+ R R E
Sbjct: 347 SIDILLDIWKVVLPRLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEAF 406
Query: 420 KREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGP---SPSPYQQSECVGRLDNG- 473
+R K Q +G D P+ + L + HG+ LA G + S + + L N
Sbjct: 407 ERRKGQKNMSKGQDRHPIVATEQL-QMYDTHGN-LAKGSWNLTTSDMVRLKKELMLANEG 464
Query: 474 --------KGTSGRPHKVPRLSSGATIGAAI------------------------VEAEN 501
K S + +++ + S I A+ +E +N
Sbjct: 465 NEDAIAIVKEQSDKNNELMKDISKEEIDDAVSKANKSNFNLAEVMKQKLIHKKHNLEKDN 524
Query: 502 SFETDPQENKEEFKAKLKEL---------------LRDKSDAFNSDNP------------ 534
E D +N ++ KA+ E + D+ D N+D P
Sbjct: 525 EEEEDISKNTKKIKAEKTESEGDLDTEIKAEIEADVNDREDTENTDLPVKNTVIIGEAPQ 584
Query: 535 -----EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 589
++ VKL EPG+ ERYY KF P + ++ RKD+V Y EG+ WV+ YYY+G
Sbjct: 585 NGVFDTDEYVKLFEPGYHERYYTAKFRV-APHDIDQLRKDMVKCYIEGVAWVLTYYYQGC 643
Query: 590 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 649
SW WFYPYHYAP A+D I FE G PF PF QL+ V P+AS HALP+ +R LM
Sbjct: 644 ASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPFEQLMSVLPAASGHALPKIFRTLM 703
Query: 650 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
++ +S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L+E E RN
Sbjct: 704 SESDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTVVRAQYPLLSEAERARNV 763
Query: 710 IMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
+L + S + K+L KE E G++G +S
Sbjct: 764 RGKPVLLI------SNKNANFERFSKKLYSKENNNTVEIKFQHFRSGLSGIVS 810
>gi|149236630|ref|XP_001524192.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451727|gb|EDK45983.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1049
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 334/761 (43%), Positives = 452/761 (59%), Gaps = 71/761 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE+ I G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEDQNEIGGAKY----EDPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE + AP T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKAPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKDAA--DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
+++DA D A +E +EF E K +++DSN ITPGT FM L+ AL+Y +
Sbjct: 116 SAQDAKIKDEAIAKEIADKEFRGELIDNAVKV-KKLWDSNAITPGTPFMDRLAEALRYLV 174
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+L NDPGW ++VI+SDA VPGEGEHK+MS++R QR+ P YDPNT+HC+YGLDADLI
Sbjct: 175 AYKLANDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIF 234
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE HF +LRE VF Q+K H+A N K +A +E+
Sbjct: 235 LGLATHEPHFRVLREDVF--ANQEKRMTISD--HVAMN-----KDQADLIEERDR----- 280
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKP+ +LH+ LREYL E PN F DLE +DD++F+CFF GNDFLPH+P+L++R+
Sbjct: 281 KKPFLWLHVNVLREYLAVELHNPNMSFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRD 340
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
I+ L+ +K+ L Y+T K +L VE + + ED IF+ R R+ QR E
Sbjct: 341 NGIDTLVNCWKRCVPRLRDYVTSDGKLNLDSVEVLMADLAIKEDEIFRNRFRIEQRKEEG 400
Query: 419 IKREK--------------AQARRGDDVEPLAQP-------------DSLVPVSR---FH 448
KR K +Q +G + P+ D P+S H
Sbjct: 401 RKRRKLAEEQDKALKSVYLSQVSKGKEKAPMEANVNMPLMDTSGNVVDGFAPLSNKDIVH 460
Query: 449 GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAA---------IVEA 499
+ + + + +L + K S + +GA +GA+ V
Sbjct: 461 NRDAITLAGMANQDAAAALKKLIDSKKKSMIEQERSSGVAGA-LGASGDSPSESSEAVAT 519
Query: 500 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
++ TD ++ + K + +D+S +ED+++L EPG+++RYYE KF+ +
Sbjct: 520 PSAANTDLEDTINGKETKKRSYQQDESIE------DEDRLRLHEPGYQKRYYEVKFHCTS 573
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD---LKDLDQFNIS 616
EE EETR++VV Y EG+ WV YYY+G SW WFYPYHYAPFA+D L+DL +
Sbjct: 574 DEEIEETRRNVVRSYIEGISWVALYYYQGCPSWTWFYPYHYAPFAADMTNLRDLFPEGVK 633
Query: 617 FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
FELG PF+P+ QL+ V P+AS HALP+ + LMTDP S + DFYP DFE+DMNGK+ SWQ
Sbjct: 634 FELGKPFRPYEQLMSVLPAASKHALPDAFHGLMTDPKSEVIDFYPEDFEIDMNGKKMSWQ 693
Query: 677 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
GI LPFI+E RLL V+ L+E E RN LF+
Sbjct: 694 GIPLLPFIEEERLLKAVQAKYSELSEYELSRNVNKEAELFI 734
>gi|354547470|emb|CCE44204.1| hypothetical protein CPAR2_400060 [Candida parapsilosis]
Length = 966
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/741 (43%), Positives = 449/741 (60%), Gaps = 46/741 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP +++ VIEE+ I G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSKKYPKIISPVIEEDEHEIGGAKY----EDPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE + P T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKRPPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA A ++ +R++ R + +DSN ITPGT FM L+ AL+Y++
Sbjct: 116 SAQDAKFKQMAIDKEIREKEARGEMINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVA 175
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L+ DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P Y+PNT+HC+YGLDADLI L
Sbjct: 176 YKLSTDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCIYGLDADLIFL 235
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA-ANCEGKAKRKAGEFDEKGDEVVVP 298
LATHE HF +LRE VF Q+ H+ ++ G +K + +E+
Sbjct: 236 GLATHEPHFRVLREDVFANQQR----------HMTVSDHVGMSKDQLSLIEERDK----- 280
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKP+ +LH+ LREYL E P F DLE +DD++F+CFF GNDFLPH+P+L++R+
Sbjct: 281 KKPFLWLHVNVLREYLAIELYNPQISFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRD 340
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
I+ L+ +KK L YLT K +L+ VE + + ED IF+ R + +R +
Sbjct: 341 NGIDTLVGCWKKCLPRLRDYLTCDGKLNLQSVEVLLGDLAIKEDEIFRNRFAMEKRREDN 400
Query: 419 IKREK--------------AQARRGDDVEPLAQPDSLVPVSRFHGSRL---ASGPSPSPY 461
KR K +Q +G D P+ PD +P+ G+ + A +
Sbjct: 401 RKRRKVAEEQDKALKSVYMSQVTKGKDKAPVV-PDKNLPLMDTSGNVVEGHAQLSNKDIV 459
Query: 462 QQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQEN--KEEFKAKLK 519
Q + + + K S +E+E+S + P N + + +
Sbjct: 460 QNRDTIALAGMANNDAAAALKKLIDSKKQLNEITPIESESSAVSTPASNGGTDSEEPQQV 519
Query: 520 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 579
+ + D D P +D ++L EPG+++RYY+ KF+ KT EE E+ R++VV Y EG+
Sbjct: 520 NFKKRQVDVDIYDEPVDD-IRLHEPGYQKRYYQVKFHCKTDEEVEQVRRNVVKSYIEGIS 578
Query: 580 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHPFKPFNQLLGVFPSA 636
WV YYY+G SW WFYPYHYAPFASD+ +LD+ I F+LG PF+P+ QL+ V P+A
Sbjct: 579 WVALYYYQGCPSWTWFYPYHYAPFASDMTNLDELFPDGIKFDLGEPFRPYEQLMSVLPAA 638
Query: 637 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
SSHALPE + LM DP+S I +FYP +FE+DMNGK+ SWQGI LPFIDE RLLD V+
Sbjct: 639 SSHALPEVFHALMKDPDSEIIEFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQGK 698
Query: 697 EHTLTEEEARRNSIMADMLFV 717
LTE E RN+ LF+
Sbjct: 699 YEELTEYEKERNTNKQAELFI 719
>gi|332238208|ref|XP_003268295.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Nomascus leucogenys]
Length = 874
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/718 (46%), Positives = 437/718 (60%), Gaps = 54/718 (7%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
+G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPN 182
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+ + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 439
T+ +L+RV+ + AVG ED IF+KR R K ++ + +R +P P
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPS 359
Query: 440 SLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGATIG 493
++ GS++AS P + Y+ R+ N S P+ S + IG
Sbjct: 360 GILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSSPSISPNTSFTSDGSPSPIG 414
Query: 494 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 553
+AE+S +S+ ED V+L E GWK+RYY+
Sbjct: 415 GIKRKAEDS---------------------------DSEPEPEDNVRLWEAGWKQRYYKN 447
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 448 KFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADM 505
Query: 614 NISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+
Sbjct: 506 PSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKK 565
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 732
Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 566 YAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL-- 623
Query: 733 HCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
Q E V+V PEL G+ G S P + SPV + D+ N V+
Sbjct: 624 --YQTGSTEPVDVP----PELCHGIQGRFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 675
>gi|402883355|ref|XP_003905185.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Papio anubis]
Length = 874
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/718 (46%), Positives = 437/718 (60%), Gaps = 54/718 (7%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
+G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPN 182
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+ + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 439
T+ +L+RV+ + AVG ED IF+KR R K ++ + +R +P P
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPS 359
Query: 440 SLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGATIG 493
++ GS++AS P + Y+ R+ N S P+ S + IG
Sbjct: 360 GILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSSPSISPNTSFTSDGSPSPIG 414
Query: 494 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 553
+AE+S +S+ ED V+L E GWK+RYY+
Sbjct: 415 GIKRKAEDS---------------------------DSEPEPEDNVRLWEAGWKQRYYKN 447
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 448 KFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADM 505
Query: 614 NISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+
Sbjct: 506 PSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKK 565
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 732
Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 566 YAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL-- 623
Query: 733 HCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
Q E V+V PEL G+ G S P + SPV + D+ N V+
Sbjct: 624 --YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 675
>gi|332858058|ref|XP_001145394.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Pan troglodytes]
gi|397478695|ref|XP_003810675.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 874
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/717 (46%), Positives = 437/717 (60%), Gaps = 52/717 (7%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
+G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPN 182
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+ + PF D+E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 439
T+ +L+RV+ + AVG ED IF+KR R K ++ + +R +P P
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPS 359
Query: 440 SLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGA 494
++ GS++AS P + Y+ R+ N S P+
Sbjct: 360 GILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSSPSISPN------------- 401
Query: 495 AIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEK 554
SF +D + L + R D+ + P ED V+L E GWK+RYY+ K
Sbjct: 402 ------TSFTSDGS------PSPLGGIKRKAEDSDSEPEP-EDNVRLWEAGWKQRYYKNK 448
Query: 555 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 614
F+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 449 FDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMP 506
Query: 615 ISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y
Sbjct: 507 SDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKY 566
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 567 AWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL--- 623
Query: 734 CKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
Q E V+V PEL G+ G S P + SPV + D+ N V+
Sbjct: 624 -YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 675
>gi|345789898|ref|XP_003433291.1| PREDICTED: 5'-3' exoribonuclease 2 [Canis lupus familiaris]
Length = 874
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 333/720 (46%), Positives = 439/720 (60%), Gaps = 58/720 (8%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E
Sbjct: 4 AIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
+G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPN 182
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+ + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKR-------ARLHQRHAERIKREKAQARRGDDV 432
T+ +L+RV+ + AVG ED IF+KR R + +R+KR++ G +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFSPGGIL 362
Query: 433 EPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGAT 491
P A P GS++AS P + Y+ R+ N S P+ S +
Sbjct: 363 TPHALGSRNSP-----GSQVASNPRQAAYEM-----RMQNNSSPSISPNTSFTSDGSPSP 412
Query: 492 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYY 551
IG +AE+S +S+ ED V+L E GWK+RYY
Sbjct: 413 IGGIKRKAEDS---------------------------DSEPEPEDNVRLWEAGWKQRYY 445
Query: 552 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 611
+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 446 KNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIA 503
Query: 612 QFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 670
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NG
Sbjct: 504 DMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNG 563
Query: 671 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
K+Y+WQG+A LPF+DE RL ++++ LT EE +RNS+ D+LFV HPL I L
Sbjct: 564 KKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETKRNSLGGDVLFVGKHHPLHDFILEL 623
Query: 731 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
Q E V+V PEL G+ G S P + SPV + D+ N +
Sbjct: 624 ----YQTGSTEPVDVP----PELCHGIQGKFSLDEEAVLPDQIVCSPVPMLRDLTQNAAI 675
>gi|403283599|ref|XP_003933202.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 874
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/718 (46%), Positives = 437/718 (60%), Gaps = 54/718 (7%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
+G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPN 182
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+ + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 439
T+ +L+RV+ + AVG ED IF+KR R K ++ + +R +P P
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPT 359
Query: 440 SLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGATIG 493
++ S++AS P + Y+ R+ N S P+ S + IG
Sbjct: 360 GILTPHALGSRNSPSSQVASNPRQAAYEM-----RMQNNSSPSVSPNTSFTSDGSPSPIG 414
Query: 494 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 553
+AE+S +S+ ED V+L E GWK+RYY+
Sbjct: 415 GIKRKAEDS---------------------------DSEPEPEDNVRLWEAGWKQRYYKN 447
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 448 KFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADM 505
Query: 614 NISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+
Sbjct: 506 PSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKK 565
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 732
Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 566 YAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL-- 623
Query: 733 HCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP-VFRSPVASMEDIMGNQVL 789
Q E V+V PEL G+ G S P + SPV + D+ N V+
Sbjct: 624 --YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDRIVCSPVPMLRDLTQNTVV 675
>gi|296200320|ref|XP_002747536.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Callithrix jacchus]
Length = 874
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 333/718 (46%), Positives = 435/718 (60%), Gaps = 54/718 (7%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E
Sbjct: 4 AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
+G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPN 182
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+ + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 439
T+ +L+RV+ + AVG ED IF+KR R K ++ + +R QP
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD-------QP- 354
Query: 440 SLVPVSRFHGSRLASGPSPSPY-----QQSECVGRLDNGKGTSGRPH-KVPRLSSGATIG 493
+ P L S SPS +Q+ R+ N S P+ S + IG
Sbjct: 355 AFTPTGILTPHALGSRNSPSSQVANNPRQAAYEMRMQNNSSPSVSPNTSFTSDGSPSPIG 414
Query: 494 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 553
+AE+S +S+ ED V+L E GWK+RYY+
Sbjct: 415 GIKRKAEDS---------------------------DSEPEPEDNVRLWEAGWKQRYYKN 447
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 448 KFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADM 505
Query: 614 NISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+
Sbjct: 506 PSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKK 565
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 732
Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 566 YAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL-- 623
Query: 733 HCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
Q E V+V PEL G+ G S P + SPV + D+ N V+
Sbjct: 624 --YQTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 675
>gi|255720663|ref|XP_002545266.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135755|gb|EER35308.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 981
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 328/749 (43%), Positives = 449/749 (59%), Gaps = 56/749 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEEE I G + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEEEDHEIGGARY----EDPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE + AP T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKAPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A++DA + + E +E E G + + +DSN ITPGT FM L+ AL+Y++
Sbjct: 116 AAQDAKLKSHQLEIEVKEREMRGEVIDDAIKGKKQWDSNAITPGTPFMDRLAEALRYWVA 175
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L NDPGW ++VI+SDA VPGEGEHK+M+++R QR+ P YDPNT+HC+YGLDADLI L
Sbjct: 176 YKLANDPGWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCIYGLDADLIFL 235
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF +LRE VF +Q+K F +A K K + +
Sbjct: 236 GLATHEPHFRVLREDVF--AKQEKKFTIRD--QIAEATSDAVKTKTED-----------R 280
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL E P PF LE +DD++F+CFF GNDFLPH+P+L++R+
Sbjct: 281 KPFLWLHVSVLREYLQVELYAPRMPFPFQLERAIDDWVFLCFFAGNDFLPHLPSLDVRDN 340
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
I+ L+ +K+ L Y+T K +L VE + + + ED IFQ+R QR + I
Sbjct: 341 GIDTLVQCWKRSLGRLKDYVTCDGKLNLESVEVLMSNLATKEDEIFQRRRAQEQRREDAI 400
Query: 420 KREKA--------------QARRGDDVEPLAQPDSLVPVSRFHGSRLA--SGPSPSPYQQ 463
KR K +G D PL D+ +P+ G+ + + + S Q
Sbjct: 401 KRRKKAIDQEKALKDIYLPTVSKGKDKAPLTA-DTNMPLMDTKGNIVEGYANLTNSDIVQ 459
Query: 464 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP--------QENKEEFK 515
++ + N + + S T + + + +S + P E++ E
Sbjct: 460 NQAIITKANMANSEAAAQLKKLIDSKKTQVSTVQDQIDSEQMTPSDSSSMPTSESEIETP 519
Query: 516 AKLKELLRDKSDAFNSDNPEE----DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 571
+ E D + D EE D +KL EPG+ +RYYE KF+ K+ EE E+ R++VV
Sbjct: 520 TTVDE---DSKKRKHKDVDEEIGTPDDIKLYEPGYHKRYYEIKFHCKSDEEIEKMRREVV 576
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELGHPFKPFNQ 628
Y EG+ WV YYY+G SW+W++PYHYAPFA+D +L + I FELG PF+PF Q
Sbjct: 577 AHYVEGIAWVALYYYQGCPSWKWYFPYHYAPFAADFTNLQELFPNGIKFELGQPFRPFEQ 636
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
L+ V P+AS HALP+ +R+LM++P+S I DFYP +FE+DMNG + SWQGI LPFIDE R
Sbjct: 637 LMSVLPAASGHALPKVFRELMSNPDSEIIDFYPEEFEIDMNGAKMSWQGIPLLPFIDEKR 696
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFV 717
LLD V+K LT EE RN+ LF+
Sbjct: 697 LLDAVQKQYELLTPEEKDRNTNKKAELFI 725
>gi|338719282|ref|XP_001489345.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Equus caballus]
Length = 874
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/660 (48%), Positives = 417/660 (63%), Gaps = 49/660 (7%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E
Sbjct: 4 AIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI 63
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
+G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+
Sbjct: 64 LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 123
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P
Sbjct: 124 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPN 182
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LC Q GH +CEG + K G+ DE D + + + FL + LREYL+ E
Sbjct: 183 KPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELT 242
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+ + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYL
Sbjct: 243 MASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYL 302
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKR-------ARLHQRHAERIKREKAQARRGDDV 432
T+ +L+RV+ + AVG ED IF+KR R + +R+KR++ G +
Sbjct: 303 TESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPGGIL 362
Query: 433 EPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGAT 491
P A P GS++AS P + Y+ R+ N S P+ S +
Sbjct: 363 TPHALGSRNSP-----GSQVASNPRQAAYEM-----RMQNNSSPSVSPNASFTSDGSPSP 412
Query: 492 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYY 551
IG +AE+S +S+ ED V+L E GWK+RYY
Sbjct: 413 IGGIKRKAEDS---------------------------DSEPEPEDNVRLWEAGWKQRYY 445
Query: 552 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 611
+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 446 KNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIA 503
Query: 612 QFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 670
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NG
Sbjct: 504 DMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNG 563
Query: 671 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
K+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 564 KKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFIVEL 623
>gi|254571933|ref|XP_002493076.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|238032874|emb|CAY70897.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|328352909|emb|CCA39307.1| 5'-3' exoribonuclease 2 [Komagataella pastoris CBS 7435]
Length = 994
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 315/747 (42%), Positives = 442/747 (59%), Gaps = 56/747 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VI++E V IDG P PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIQDEDVDIDGESRPTRYEDPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P T DE+ +F Y + + +M RPRK++Y+A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPEHKPVPETEDEMMLDVFAYTENVIMMARPRKVIYIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA D+ ++ +E E++G + + + +DSN ITPGT FM L+ +L+Y+
Sbjct: 120 SAQDAKDANEKKAAELKEMEKKGEIIDDAIKNKKTWDSNAITPGTPFMHRLADSLRYWAA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW I+VI+SDA+VPGEGEHKIMSYVR R+ P +DPNT HC+YGLDADLI L
Sbjct: 180 YKLTTDPGWSGIEVIISDASVPGEGEHKIMSYVRSLRSSPKHDPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF QDK Q + E + E+ K
Sbjct: 240 GLATHEPHFKILREDVFA---QDKKSYSLQDQLRMTDIERQ-------------ELKDKK 283
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
P+ +LH+ LREYL E +P F DLE +DD++F+CFF GNDFLPH+P+L++R+
Sbjct: 284 TPFLWLHLNILREYLQIELNVPGLSFPFDLEKSIDDWVFICFFCGNDFLPHLPSLDVRDN 343
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I L+ ++K+ + GYLT +L VE + + ED IF+KR +R E
Sbjct: 344 SITTLVTIWKQILPTMKGYLTTDGYLNLPAVERLLAELAKKEDYIFRKRYEDEKRSLENQ 403
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
KR K LAQ S + +++G +P ++ + + G
Sbjct: 404 KRRK-----------LAQEQS--SARSQNAPNISTGKDKAPLTPNQNIPLYTTSGESVGI 450
Query: 480 PHKVPRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLK------------------- 519
+ + + + EA S E Q + E K K
Sbjct: 451 KMTDSEMVNNSALITKANEANKSIAELLKQNLQNEINKKRKISNEEQEVVKESVEEVVEE 510
Query: 520 -ELLRDKSDAFNSDN----PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ + SD +S P+ ++++L EPG+++RYYE KF+ K P++ ++ +++V +Y
Sbjct: 511 EDDVLVTSDPEDSSTEILIPKNEEIRLWEPGYRKRYYETKFHTKDPQKVKKIARNMVQKY 570
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
EG+ WV+ YYY+G SW W+YPYHYAPFA+D +L + I F G PF+P+ QL+ V P
Sbjct: 571 IEGVSWVLLYYYQGCPSWNWYYPYHYAPFAADFVNLSELKIEFVEGTPFRPYEQLMSVLP 630
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
+ASSH LP+ +R LM+D NS I DFYP +F +DMNGK+ WQ I LPFIDE RLL V+
Sbjct: 631 AASSHNLPDVFRSLMSDANSEIIDFYPEEFPLDMNGKKVIWQAIPLLPFIDENRLLKAVQ 690
Query: 695 KIEHTLTEEEARRNSIMADMLFVLLSH 721
LTE+E RN+ +++L + SH
Sbjct: 691 SKYDQLTEDEKFRNTNRSEILVLGRSH 717
>gi|294953215|ref|XP_002787652.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239902676|gb|EER19448.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 982
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 326/788 (41%), Positives = 465/788 (59%), Gaps = 70/788 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG--------VKIPVDTSKPNPNGLEYDNLY 52
MGVP F+RWL +YP V+ D +E+ + + G +PVD +PNPNG+E+DNLY
Sbjct: 1 MGVPTFFRWLCTRYPKVIKDAVEKVCIEVPGEGGDGANTYDVPVDFEEPNPNGIEFDNLY 60
Query: 53 LDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
LD+NGIIHPC HPED P D +F + Y+DRL +VRPRKLLY+AIDGVAPRAKMN
Sbjct: 61 LDLNGIIHPCCHPEDGMTPENEDVMFLNIMRYVDRLVRIVRPRKLLYVAIDGVAPRAKMN 120
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQR+RRF+A+++A + EEE+LR++ +EGR+ PP +DSNVITPGT F+ ++
Sbjct: 121 QQRARRFKAAQEATEQMKEEEKLRRQMVKEGRE-PPSKKGVPWDSNVITPGTPFLDKVAH 179
Query: 173 ALQYYIHLRLNNDPGWEKI--KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
L +YI R+ NDP W+ + + ILSDA PGEGEHKIM ++R QR + GY+PNT H LY
Sbjct: 180 MLHWYISDRMTNDPLWQLLGFRCILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTHMLY 239
Query: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
G DADLIML LATHE+ F I+REVV P ++ KC+LCG+ GHL + C G ++ +
Sbjct: 240 GADADLIMLGLATHEISFYIIREVVLKP-EERKCYLCGKVGHLPSECTGDDQQPDLGDES 298
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI----PNP----PFEIDLECIVDDFIFMCFF 342
+ DE ++ KP+Q + + LREYL +F PN PF D+E ++DDF+FMCFF
Sbjct: 299 EEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDFVFMCFF 358
Query: 343 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 402
VGNDFLPH+P+L IR+G+I+ ++ +Y + L YLT + +L +VE F+ +G ED
Sbjct: 359 VGNDFLPHLPSLNIRDGSIDQMICLYVEILPTLTDYLTCQGEVNLVQVEVFLDYLGRVED 418
Query: 403 RIFQKRARLHQRHAERIKREKAQAR----RGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 458
+F++R +R K+++ Q R +G L + +L + +
Sbjct: 419 EVFRRRLA----RDDRFKQQRLQGRFINQKGGGANSSRTKRPLEDANVLQARKLLAALA- 473
Query: 459 SPYQQSECVGRLDNGKGT-SGRPHKVPRLSSGATIG------AAIVEAENS----FETDP 507
D G T +P KVP ++ A G + E +N+ F
Sbjct: 474 ------------DPGSDTEKDKPKKVPTEATEAPTGKQGRHRTVLTEEDNASPPVFPPSE 521
Query: 508 QENKE-----EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPG---WKERYYEEKFNAKT 559
EN + EF+ +++ +RDK D P D+V+LGE G WK+RYY +KF+ T
Sbjct: 522 GENLDTAEVVEFQETVRQRVRDKQD-LGEKYP--DRVRLGEGGEHSWKQRYYTDKFHV-T 577
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS--- 616
E+ + + Y EG+CWV+ YYY+GV SW WFYPYHYAPFA+DL +
Sbjct: 578 QEDFADFIPRIRKAYVEGICWVLQYYYQGVVSWDWFYPYHYAPFATDLVGCSALECNKAS 637
Query: 617 -FELGHPFKPFNQLLGVFP--SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
+ G PF P QL+ V P S +P +KLMT+PNS I DFYP DF +D+NGK++
Sbjct: 638 YYTKGKPFLPLQQLMSVLPPRSGPPADIPVEMQKLMTEPNSSIIDFYPEDFALDLNGKKF 697
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
+WQ + LPFI + RL+ ++ L E RRN+ LFV ++ L+ + + +
Sbjct: 698 TWQAVILLPFIIQDRLIAALQPFIDKLDGERKRRNTPAEPRLFVHMNDTLAPQLQRVHDG 757
Query: 734 CKQLKIKE 741
K+ +++
Sbjct: 758 GKEAALED 765
>gi|406603016|emb|CCH45428.1| 5'-3' exoribonuclease 2 [Wickerhamomyces ciferrii]
Length = 940
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/759 (42%), Positives = 454/759 (59%), Gaps = 66/759 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWL+ KYP +++ +EE+ V+DGV +P S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPAFYRWLSRKYPKIISPTLEEDATVVDGVTVPPSYSNPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+RP P T DE+ +F+Y DR+ M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENRPPPETEDEMLLAVFEYTDRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSD-SQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA E +RL+ E G + + +DSN ITPGT FM L++AL+Y+
Sbjct: 120 SARDAKIQDEERQRLQDLREGYGEVIDEAVKVKKTWDSNAITPGTPFMDKLALALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L++DPGW+ ++VI+SDA VPGEGEHKIM++VR QR+ Y+PNT+H +YGLDADLI L
Sbjct: 180 YKLSSDPGWKDLQVIISDATVPGEGEHKIMNFVRSQRSDIEYNPNTKHAIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF +LRE VF + +K + +L+ + RK E E K
Sbjct: 240 GLATHEPHFRVLREDVF--ARDNKMMSVQEKMNLS-----EEHRKLIEEKES-------K 285
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +L+I LREYL+ E IP PF+ DLE +DD++FMCFF GNDFLPH+P+L++R+
Sbjct: 286 KPFLWLNINVLREYLEIELNIPRLPFKFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRDN 345
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I+LL++++K+ + Y+T +L VE + + E IF++R QR +
Sbjct: 346 SIDLLVSIWKQVLPKMKSYITCDGILNLENVEVLLSNLAPREADIFRQRQAQDQRRNDND 405
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS---PSPYQQSECVGRLDNGKGT 476
KR K + +A+ L V++ + P P ++ VG++
Sbjct: 406 KRRKVWQEE----DKIAKNQYLANVTKGKADKGTYTPVNNLPLFDVNNQSVGKVH----M 457
Query: 477 SGRPHKVPRLSSGATIGAAIVEA--------------ENSFETDPQENKEEFKAKLKELL 522
S + ++++G T A ++ E E Q N A ++LL
Sbjct: 458 SNKELAQAQINAGKTPDATTDDSSAKEESETPQPEVKEEDVENANQANISAAAALRQKLL 517
Query: 523 RDKS--------------------DAFNSDNP----EEDKVKLGEPGWKERYYEEKFNAK 558
+K+ A +SD+ + D V+L EPG+ +RYY KF+
Sbjct: 518 ANKTKKSEDATIGEKRQIPDSPTDSAVSSDSEAADVDGDPVRLFEPGYHDRYYRIKFHI- 576
Query: 559 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 618
+ EE E T K+VV Y EG+ WV+ YYY+G SW W+YPYHYAPFA D ++ +I F
Sbjct: 577 SDEEVEATSKEVVKHYIEGISWVLLYYYQGCPSWNWYYPYHYAPFAQDFTNIKDLDIKFT 636
Query: 619 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 678
G PF P+ QL+ V P+AS H LPE +R LM+D +SPI DFYP DF +DMNGK+ SWQGI
Sbjct: 637 QGKPFLPYEQLMSVLPAASGHNLPEIFRPLMSDADSPIIDFYPEDFPIDMNGKKMSWQGI 696
Query: 679 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
LPFIDE RLL+ V+ LT+ E RN D++F+
Sbjct: 697 VLLPFIDEKRLLEVVRDQYPKLTDAEKGRNVRKEDVVFL 735
>gi|156034478|ref|XP_001585658.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980]
gi|154698945|gb|EDN98683.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 337/813 (41%), Positives = 453/813 (55%), Gaps = 117/813 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL ++YP +V+ VIEE+P IDG IP+D PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLTKQYPKIVSPVIEEQPREIDGQIIPIDIRGPNPNGEECDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP P +E+ +F Y DR+ MVRPRKLL +AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+++A + A ++ L + + +G + + +DSN ITPGT FM +L+ +L+Y+I
Sbjct: 121 AAQEAKEKAEDKAELLKMLKSQGTQAEETEVKKAWDSNEITPGTPFMDILAASLRYWIAY 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+LN DP W K+KVI+SD+ VPGEGEHKIM +VR QR+ P +DPNTRH +YGLDADLIML
Sbjct: 181 KLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHDPNTRHVMYGLDADLIMLG 240
Query: 241 LATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE V F G+ C LCGQ GH A C+G K K GEFDEK +
Sbjct: 241 LATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPTL-- 298
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL E LEIRE
Sbjct: 299 KPFIWLHVSILREYLAAEI-----------------------------------LEIRED 323
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
IN L+A+++ +GGYLT L R + + + ED IF++R + + ++
Sbjct: 324 GINTLIAIWRDNIPYMGGYLTKDGHVDLERAQFILDGLAKQEDAIFRRRRKAEENFQKKR 383
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
K + R R G+ + SPS +Q G +G
Sbjct: 384 KLNNERNER---------------YGRGRGNNAGAQDSPSNGRQPP------GGAAPTGL 422
Query: 480 PHKVPRLSS--------------GA---------TIGAAIVEAENSFETD---------- 506
P P +++ GA + AA+ E N TD
Sbjct: 423 PLFTPGMANKEAKAISHDMVMNRGAAYKASIANKSAAAALKEMMNGKSTDDDNGEPRADD 482
Query: 507 -----PQENKEEFKAKLKELLRDKSDAFNS-------------DNPEEDKVKLGEPGWKE 548
P + KA+L E + NS D+ D V+L E G+ +
Sbjct: 483 TSAELPATALGKRKAELIEDDDSSTPGRNSPIPGTPGTPTTPGDDLPPDTVRLWEDGYAD 542
Query: 549 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK 608
RYYE+KFN + P++ E R V Y EGL WV+ YY++G SW W+YPYHYAPFA+D
Sbjct: 543 RYYEQKFN-RDPKDI-EFRHQVGKAYVEGLAWVLLYYFQGCPSWDWYYPYHYAPFAADFA 600
Query: 609 DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 668
+L I+F+ G F+PF QL+GV P+AS A+PE + LMT+ +S I DFYP DF VD+
Sbjct: 601 NLKDMKINFQKGRIFRPFEQLMGVLPAASRQAIPEQFHHLMTNEDSEIIDFYPEDFIVDL 660
Query: 669 NGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY 728
NGK+++WQG+A LPFID RLLD + K+ TL + + RN + D+L V SH ++Y
Sbjct: 661 NGKKFAWQGVALLPFIDSERLLDAMAKVYPTLPVDVSARNGLGKDVLLVSESH---HALY 717
Query: 729 TLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
DE + K++ +LNP++S+G+ G +
Sbjct: 718 --DEITSKFYSKKQGSPHMKLNPKVSEGLTGRV 748
>gi|449442897|ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/386 (73%), Positives = 324/386 (83%), Gaps = 5/386 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVV-IDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP +ADV+EEEPV GV P+D SKPNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE +P P T+D VF+ +FDYID LF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGTEFM VLS+ALQYY
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN++PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG-DEVVVP 298
+LATHEVHFSILREV+ PGQQ+KC+ CG+ GHLAA C GK+ G D G DE +
Sbjct: 241 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSD---GPEDWNGADETPIH 297
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KK YQFL+IW LREYL YE IPNPPFEI+ E IVDDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 298 KKKYQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 357
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSK 384
GAINLLM +Y+KEF A+GGYLTD +
Sbjct: 358 GAINLLMHIYRKEFPAIGGYLTDAGE 383
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/299 (51%), Positives = 202/299 (67%), Gaps = 13/299 (4%)
Query: 491 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 550
IG + +A + QEN EE + + + + + P DK+KLGEPG+KERY
Sbjct: 373 AIGGYLTDA-----GEAQENNEEMRGRAR-----RENGPPPPPPTVDKIKLGEPGYKERY 422
Query: 551 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
Y EKFNA P E ++DVVL+Y EGLCWV YYY GVCSWQW+YPYHY+PFASDLK+L
Sbjct: 423 YAEKFNA-NPANIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNL 481
Query: 611 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 670
I+F +G PFKPF+QL+G P+ASS ALPE YR LMTDP+SPI +FYP+DFE+DMNG
Sbjct: 482 ADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNG 541
Query: 671 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
KR+ WQG+AKLPFIDE +LL + +++E +LT+EE RNS+M DML+ +HPLSA I++
Sbjct: 542 KRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSVMLDMLYTHCTHPLSAQIFSY 601
Query: 731 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ QL R ++ S GMNGY+ C + V +SP+ S+ DI NQVL
Sbjct: 602 YQVASQLPPHARTCWV--IDTNASGGMNGYLWLCERNVIRNVVQSPINSLPDIQCNQVL 658
>gi|307136058|gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/386 (73%), Positives = 326/386 (84%), Gaps = 5/386 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV-VIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP +ADV+EEEP+ +GV +P+D SKPNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE +P P T+D VF+ +FDYID LF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGTEFM VLS+ALQYY
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN++PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG-DEVVVP 298
+LATHEVHFSILREV+ PGQQ+KC+ CG+ GHLAA C GK+ G D G DE +
Sbjct: 241 SLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSD---GPEDWNGADETPIH 297
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KK YQFL+IW LREYL YE IPNPPFEI+ E IVDDF+F+CFFVGNDFLPHMPTLEIRE
Sbjct: 298 KKKYQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIRE 357
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSK 384
GAINLLM +Y+KEF A+GGYLTD +
Sbjct: 358 GAINLLMHIYRKEFPAIGGYLTDAGE 383
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/299 (52%), Positives = 199/299 (66%), Gaps = 13/299 (4%)
Query: 491 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 550
IG + +A + QEN EE + + + + P DK+KLGEPG+KERY
Sbjct: 373 AIGGYLTDAGEA-----QENNEEMRGRAR-----RESGPPPPPPTVDKIKLGEPGYKERY 422
Query: 551 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
Y EKFNA P E R+DVVL+Y EGLCWV YYY GVCSWQW+YPYHY+PFASDLK+L
Sbjct: 423 YAEKFNA-NPANIAEIRQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNL 481
Query: 611 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 670
I+F LG PFKPF+QL+G P+ASS ALPE YR LMTDP+SPI +FYP+DFE+DMNG
Sbjct: 482 ADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNG 541
Query: 671 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
KR+ WQG+AKLPFIDE +LL + +++E +LT+EE RNSIM D+L+ +HPLSA I++
Sbjct: 542 KRFLWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSIMLDLLYTHCTHPLSAQIFSY 601
Query: 731 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ QL R ++ S GMNGY+ C + V SP+ + DI NQVL
Sbjct: 602 YQVASQLPPHARTCWV--IDTNASGGMNGYLWLCERNVIRNVVPSPIIGLPDIQCNQVL 658
>gi|363753664|ref|XP_003647048.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890684|gb|AET40231.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 577 bits (1487), Expect = e-161, Method: Compositional matrix adjust.
Identities = 312/776 (40%), Positives = 450/776 (57%), Gaps = 76/776 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RW++ KYP +++ V+EE P ++DGVK+P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWISRKYPKIISPVLEETPQIVDGVKLPIDYSSPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP T D++ +F+Y +R+ M RPR++L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPAPETEDQMLLEVFEYTNRVLNMARPRRVLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
+++DA + E+ R+ E E G + ++ +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAKFANEEKARVLAEREAYGELIDDSVKAKTTWDSNAITPGTPFMDKLAAALRYWTS 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKHLQVIISDATVPGEGEHKIMNFIRSQRVDSQYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + N + K+ E D +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRRR-----PRAQEMINMSEEDKQHLIEQDAE-------- 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL E + F DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 KPFLWLHVSVLREYLAAELHVQRLSFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K +L YLT + +L V+ ++ +GS E +F+++ R E
Sbjct: 347 SIDILVEIWKTVLPSLKTYLTCDGELNLAGVQKVLEQLGSREPELFKRKHEQESRKKEAQ 406
Query: 420 KREKA-----QARRGDDVEPLAQPDSLVPVSRFHGS--------------------RLAS 454
+R K +G P +PV +G LA+
Sbjct: 407 ERRKMLKNNPNVTKGAVDRNFTVPLESMPVYDVNGKAADESLNLTNKDFANMRKEINLAN 466
Query: 455 GPSPSPYQQSECVGRLDNGKGTSGRP-------------HKVPRLSSGATIGAAIVEAEN 501
+ + +NG + P +V LS+ A++ I+ +
Sbjct: 467 EGDKTALGALQKRSEENNGTIKTDAPDFSQEELRNAVEVSRVGNLSAAASLKERILAKKR 526
Query: 502 SFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE--------------------EDKVKL 541
++ +E A+L + SD+ E + +V L
Sbjct: 527 KLAAQEEDGRESKAARLTT--DAGAHQAGSDHQESQLDVPIMSKETPISGFIDTDKEVHL 584
Query: 542 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
EPG+ +RYY+ KF+A T ++ + R D+ Y EG+ WV+ YYY+G SW W+YPYHYA
Sbjct: 585 YEPGYHDRYYQAKFHAPT-KDIDSLRSDLARCYIEGIAWVLLYYYQGCPSWTWYYPYHYA 643
Query: 602 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
PFA+D ++ +SF+LG PF PF QL+GV P+AS H LP+ +R LM+DP+S I DF+P
Sbjct: 644 PFAADFVNISDLVVSFDLGQPFLPFEQLMGVLPAASGHNLPDVFRPLMSDPDSEIIDFFP 703
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+F +DMNG++ +W+GIA LPFIDE RL V+K H L++EE RN D+L +
Sbjct: 704 EEFAIDMNGEKMAWKGIALLPFIDEQRLRTAVRKQYHLLSDEEKARNVQRNDVLII 759
>gi|354468134|ref|XP_003496522.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cricetulus griseus]
Length = 1045
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 336/767 (43%), Positives = 447/767 (58%), Gaps = 78/767 (10%)
Query: 26 PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYI 85
P +GVKIPVD SKPNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+YI
Sbjct: 100 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 159
Query: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK 145
DRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++A E++R+R+E +G
Sbjct: 160 DRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGF 219
Query: 146 LPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGE 205
LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+ PGEGE
Sbjct: 220 LPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGE 279
Query: 206 HKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCF 265
HKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C
Sbjct: 280 HKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCA 338
Query: 266 LCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPF 325
LC Q GH +CEG + K G+ DE D + + + F+ + LREYL+ E + + PF
Sbjct: 339 LCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFIRLNVLREYLERELTMASLPF 398
Query: 326 EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP 385
D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+
Sbjct: 399 PFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYV 458
Query: 386 SLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVS 445
+L+RV+ + AVG ED IF+KR R K ++ + +R +P P ++
Sbjct: 459 NLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPH 515
Query: 446 RFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE 500
G +AS P + Y+ + + S G+ +AE
Sbjct: 516 ALGSRNSPGCHVASNPRQAAYEMRM------HSNSSPSISPNTSFASDGSPSPGIKRKAE 569
Query: 501 NS-FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
+S E +P++N ++A K+ R + F+ D +EKF K
Sbjct: 570 DSDSEPEPEDNVRLWEAGWKQ--RYYKNKFDVD-----------------AADEKFRRKV 610
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ E V+ Y +G SW+W+YP+HYAPFASD + + + FE
Sbjct: 611 VQSYVEGLCWVLRYYYQG-----------CASWKWYYPFHYAPFASDFEGIADMSSEFEK 659
Query: 620 G-HPFKPFNQLLGVFPSASSHALPEHYRKLMTD-----------------------PNSP 655
G PFKP QL+GVFP+AS + LP +R + +S
Sbjct: 660 GTKPFKPLEQLMGVFPAASGNFLPPSWRNSRENIRQGLRETSLRFLVESIAVCSHSQDSS 719
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D++
Sbjct: 720 IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEENRRNSLGGDVM 779
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
FV HPL I L Q E ++V PEL G+ G S
Sbjct: 780 FVGKLHPLHDFILEL----YQTGSTEPIDVP----PELCHGIQGKFS 818
>gi|19115067|ref|NP_594155.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe 972h-]
gi|729332|sp|P40848.1|XRN2_SCHPO RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein dhp1
gi|496393|dbj|BAA04601.1| Dhp1 protein [Schizosaccharomyces pombe]
gi|1177359|emb|CAA93235.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe]
Length = 991
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 345/818 (42%), Positives = 472/818 (57%), Gaps = 75/818 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPA +R L+ K+ V+ VIE + DG +I D S PNPNG+E DNLYLDMNGI+
Sbjct: 1 MGVPALFRLLSRKFAKVITPVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP T DE+ +F+Y DR+ MVRPR+LL++AIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPETEDEMMVAVFEYTDRILAMVRPRQLLFIAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYI 178
R+S++AA E + +E +++G + + + +DSN ITPGT FM L+ +L+YYI
Sbjct: 121 RSSREAALKEEELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFMDTLAKSLRYYI 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+LN+DP W ++ ILSDA+VPGEGEHKIM ++R QR P YDPNT H +YGLDADLIM
Sbjct: 181 INKLNSDPCWRNVRFILSDASVPGEGEHKIMEFIRSQRVKPEYDPNTHHVVYGLDADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE HF +LRE VF Q G E + K D+ + VP
Sbjct: 241 LGLATHEPHFRVLREDVFF-----------QQGSTKKTKEERLGIK--RLDDVSETNKVP 287
Query: 299 -KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KKP+ +L++ LREYL+ E +PN PF DLE +DD++F FFVGNDFLPH+P+L+IR
Sbjct: 288 VKKPFIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIR 347
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF----QKRARLHQ 413
+GA+ L +++ +GGYLT +L R E + AVG+ ED IF Q+ R ++
Sbjct: 348 DGAVERLTEIWRASLPHMGGYLTLDGSVNLARAEVILSAVGNQEDDIFKRLKQQEDRRNE 407
Query: 414 RHAERIKREKAQARRG--DDV--EPLAQPDSLVPVSRFHGSRLASGP--------SPSPY 461
+ R +RE Q D+V + + S V+ + + + P +P+P
Sbjct: 408 NYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVDTKPPKKTQKIDAPAPV 467
Query: 462 QQSECVGRLDN-GKGTSGRPHKVPRLSS--GATIGAAIVEAENSFETDPQENKEEFKAKL 518
+ N G + R R ++ G + AA V + N + + L
Sbjct: 468 DLVNLSEKTSNRSLGATNRELINNRAANRLGLSREAAAVSSVNKLAASALKAQLVSNETL 527
Query: 519 KELLRDKSDAFNSDNPEEDKVKLGEP------------GWKER---YYEEKFNAKT---- 559
+ + + S A +S + D ++ P G K + EE N T
Sbjct: 528 QNVPLEDSIASSSAYEDTDSIESSTPVVHPIDTKVSNVGQKRKAPDSTEENENTDTVRLY 587
Query: 560 -PEERE--------------ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
P RE E ++ V Y GLCWV+ YYY+G SW W+YPYHYAPFA
Sbjct: 588 EPGYRERYYEQKFHISPDEPEKIREAVKHYVHGLCWVLLYYYQGCPSWTWYYPYHYAPFA 647
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
+D KDL ++ FEL PFKP+ QLLGV P+AS + LPE + LMTD NS I DFYP +F
Sbjct: 648 ADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLMTDENSEIIDFYPENF 707
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS 724
+D+NGK++ WQG+A LPFIDE RLL+ V KI LTEEE++RN + +LF+ HP+
Sbjct: 708 TIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESKRNEDGSTLLFISEHHPM- 766
Query: 725 ASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
E KQL K+R +L+ +++ G+ G ++
Sbjct: 767 -----FSELVKQLYSKKRQGKPLKLSGKMAHGLFGKVN 799
>gi|448528644|ref|XP_003869739.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380354093|emb|CCG23606.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 964
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 324/757 (42%), Positives = 447/757 (59%), Gaps = 81/757 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP +++ VIEE+ I G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSKKYPKIISPVIEEDQHEIGGAKY----EDPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE + P T DE+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKRPPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKDAA------DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
+++DA D E+ R E + K + +DSN ITPGT FM L+ AL
Sbjct: 116 SAQDAKFKQMAIDKEIREKEARGEMINDAVK-----GKKQWDSNAITPGTPFMDRLAEAL 170
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y++ +L+ DPGW ++VI+SDA VPGEGEHK+MS++R QR+ P Y+PNT+HC+YGLDA
Sbjct: 171 RYWVAYKLSTDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCIYGLDA 230
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA-ANCEGKAKRKAGEFDEKGD 293
DLI L LATHE HF +LRE VF Q H+ ++ G +K + +E+
Sbjct: 231 DLIFLGLATHEPHFRVLREDVF----------ANQERHMTVSDHVGMSKDQLSLIEERDK 280
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+KP+ +LH+ LREYL E P F DLE +DD++F+CFF GNDFLPH+P+
Sbjct: 281 -----RKPFLWLHVNVLREYLSIELFNPQISFSFDLERAIDDWVFICFFAGNDFLPHLPS 335
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR----- 408
L++R+ I+ L+ +KK L YLT K +L+ VE + + ED IF+ R
Sbjct: 336 LDVRDNGIDTLVNCWKKCLPRLRDYLTCDGKLNLQSVETLLGDLAIKEDEIFRNRFAAEK 395
Query: 409 --------ARLHQRHAERIKR-EKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS 459
R+ + + +K +Q +G D P+A PD+ +P+ GS +
Sbjct: 396 RREENRKRRRVAEEQDKALKNVYMSQVTKGKDKAPVA-PDTNLPLMDTSGSIV------- 447
Query: 460 PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI-----VEAENSFETDP------- 507
E +L N R L+ A AA+ ++++ + D
Sbjct: 448 -----EGHAQLSNKDLVQNR--DTIALAGMANNDAAVALKKLIDSKKQLQEDTPLDSESS 500
Query: 508 ----QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEER 563
+ ++ + ++ + D P +D ++L EPG+++RYY+ KF+ KT EE
Sbjct: 501 APSNSASNANTDSEEPQQVKTRKRPVEDDEPVDD-IRLHEPGYQKRYYQAKFHCKTDEEV 559
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF---NISFELG 620
E+ R+DVV Y EG+ WV YYY+G SW WFYPYHYAPFASD+ +L + I F LG
Sbjct: 560 EQVRRDVVKSYIEGISWVALYYYQGCPSWTWFYPYHYAPFASDMTNLRELFPGGIKFNLG 619
Query: 621 HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAK 680
PFKP+ QL+ V P+ASSHALPE + LM DP+S I +FYP +FE+DMNGK+ SWQGI
Sbjct: 620 EPFKPYEQLMSVLPAASSHALPEVFHALMKDPDSEIIEFYPEEFEIDMNGKKMSWQGIPL 679
Query: 681 LPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
LPFI+E RLLD V+ LTE E RN+ LF+
Sbjct: 680 LPFINEKRLLDAVQGKYDQLTEYEKERNTNKQAELFI 716
>gi|189191016|ref|XP_001931847.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973453|gb|EDU40952.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1104
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 328/825 (39%), Positives = 466/825 (56%), Gaps = 83/825 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP +V+ V EE P + IPVD + PNPNG E+DNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP T ++ +F+Y DR+ MVRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFER--EGRKLPPKSD--------SQVFDSNVITPGTEFMAVL 170
A+++ A E++ R EF++ +K D + +DSN ITPGT FM +L
Sbjct: 121 AARE----AKEKDEERAEFQKILNSQKASRGEDINTLEEVVEKTWDSNAITPGTPFMHLL 176
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
+ +LQY+ + DP W+ +KVI+SDA+VPGEGEHKIM+++R QR +P +DPNT H +Y
Sbjct: 177 AESLQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIY 236
Query: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFD 289
GLDADLIML+LATHE HF +LRE VF +DK C CG+ GH+ NCE K +
Sbjct: 237 GLDADLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNCEFPEDEKKLTEE 296
Query: 290 EKGDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 346
E +E + KPY +LH LREYL E P F+ DLE +DD++FMCFFVGND
Sbjct: 297 EAAEEWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDWVFMCFFVGND 356
Query: 347 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
FLPH+P+LEIR+ I+LL+++++ + Y+T P +RRV+ + A+ S E IF+
Sbjct: 357 FLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSALASREAGIFK 416
Query: 407 KRARLHQRHAERIKREKAQA----RRGDDVEPLAQPDSLVPVSRFHGSRLASGP---SPS 459
KR + R A R +AQ+ R+ D + ++ P + ++G P
Sbjct: 417 KRKEVADRQAANRARREAQSNAHKRQRTDNDGVSAP-GFKRAKETTDTYTSAGIVFFDPK 475
Query: 460 PYQQSEC------VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEE 513
Q E + + + ++ + G ++ E E + +++P
Sbjct: 476 DAQSKEVRDVHKDIMHSRDSQSNKSAAARLKEMLKAKADGTSLPEPEPTPDSEPASESAS 535
Query: 514 FKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN--AKTPEEREETRKDVV 571
L + K D E D + G PG + A+ P++ + +D +
Sbjct: 536 GTETPVHLGKRKLD-------EVDDLDNGTPGRNTPVVPQSPTQAAQPPKKDDSPPEDTI 588
Query: 572 LRYTEGL-------------------CWVMHYYYEGVC-----------SWQWFYPYHYA 601
+ + +G V Y EG+C SW W++P+HYA
Sbjct: 589 MLWEDGYEERYYEQKFHVAPNDIAFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYA 648
Query: 602 PFASD---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
PFA+D L+D+D + FE G PF P+ QL+GV P+AS+HA+PE +R LM DPNS I D
Sbjct: 649 PFAADFVGLEDMDPRKL-FEKGVPFHPYEQLMGVLPAASNHAIPEPFRVLMEDPNSSIVD 707
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF +D+NGK+++WQG+A LPFIDE RLL+ + L+++E +RN + L
Sbjct: 708 FYPEDFPIDLNGKKFAWQGVAVLPFIDEKRLLEAMATKYPELSDDERKRNEFGKETLM-- 765
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 763
S D+ K L K + K +++P S ++G I P
Sbjct: 766 ----FSQESGLFDDVEKALYRKG--QQKHKIDPAKSRALHGDIEP 804
>gi|300176532|emb|CBK24197.2| unnamed protein product [Blastocystis hominis]
Length = 1028
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 310/767 (40%), Positives = 438/767 (57%), Gaps = 63/767 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP ++WLA+KYP + + +EE ++DG+ IP D S PNPNG+E+DN Y+DMNGIIH
Sbjct: 1 MGVPTLFKWLAKKYPKSIMNCVEEFGTMVDGLYIPPDVSLPNPNGIEFDNFYIDMNGIIH 60
Query: 61 PCFHPED-RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H E P T + F+ MF Y+DRLF +VRPRKL+Y+A+DGVAPRAKMNQQRSRRF
Sbjct: 61 NCSHNEGLDKVPETSKDTFENMFMYLDRLFEIVRPRKLIYLAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A ++ D E+ +R G+K+PP S FDSN ITPGTE+M + L++YI
Sbjct: 121 SAFQERQDRKDAEDEIRSRMLAAGKKVPPPRTSS-FDSNKITPGTEYMMEICDNLRWYIA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R++++P W+ + VILSD +VPGEGEHKIM Y+R +R PGYDPNT+H ++GLDADLIML
Sbjct: 180 DRMSHNPAWQNVTVILSDGSVPGEGEHKIMDYIRRERAQPGYDPNTKHIIHGLDADLIML 239
Query: 240 ALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
LATHE +F ILRE V + Q +C LCG GHLAA C+GK + G + +
Sbjct: 240 GLATHEAYFYILREEVTSSTLQVTRCALCGSDGHLAAQCQGKKPQPRGALTRESKYM--- 296
Query: 299 KKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
K+P Q L + LREYL EF R+ + P+ D E ++DD + +CF VGNDFLP +P L
Sbjct: 297 KQPLQILQLPVLREYLQGEFGLLERVISFPY--DFEHVLDDIVLLCFLVGNDFLPRLPCL 354
Query: 355 EIREGAINLLMAVYKKEFRALGGYLT-DGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
IREGA++LL +YK A GYLT DG K L R+ + + E I ++R
Sbjct: 355 SIREGALDLLFNLYKSILPAERGYLTADGGKIDLPRLHRIFEELAKVEGEILRRR----- 409
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH------------------------- 448
R R +++A+A R D + L P+ +PV R
Sbjct: 410 RWINRDNQQRARAARTDHL--LKAPEVKLPVKRNREEISLENEDEDDDDQNGGDFDKETA 467
Query: 449 -----------GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIV 497
+ LA+ + + + +E ++D + P + G
Sbjct: 468 VDSEDSAKEKKAANLAAAVTDALF--AEQTAKIDADAAANQNQDTNPSDGNTNPSGGNGE 525
Query: 498 EAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNA 557
A ++ + +++K E + E L++ N+D+ +D ++LGE GWK+RYY EKF
Sbjct: 526 TASSALSAE-EKDKIEMEYFSLEFLKEWKKR-NTDDSVQDTIRLGEEGWKQRYYREKF-C 582
Query: 558 KTPEEREETR--KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNI 615
+ P +R + + + Y EGL W+M YYY+G SW WF+P+H+AP AS L +
Sbjct: 583 RKPGDRLDGAFYRSICTSYVEGLRWIMLYYYKGCPSWDWFFPFHFAPCASTLAEFSYEAT 642
Query: 616 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 675
F+ G PF+P +QL+ P ++ LP+ +++LMT PNSPI DFYP E D +G + W
Sbjct: 643 PFKEGKPFRPLDQLMANQPPGCAYLLPKPFQELMTSPNSPIRDFYPKRIEYDTDGLPFRW 702
Query: 676 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP 722
A + FID+ RLL + + LT + RN + D+L V S P
Sbjct: 703 LWTALISFIDKDRLLAAIDSVMDQLTPADLIRNHVGVDLLCVRRSIP 749
>gi|222447124|pdb|3FQD|A Chain A, Crystal Structure Of The S. Pombe Rat1-Rai1 Complex
Length = 899
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 336/818 (41%), Positives = 462/818 (56%), Gaps = 77/818 (9%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
GVPA +R L+ K+ V+ VIE + DG +I D S PNPNG+E DNLYLD NGI+H
Sbjct: 5 GVPALFRLLSRKFAKVITPVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDXNGIVH 64
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP T DE +F+Y DR+ VRPR+LL++AIDGVAPRAK NQQRSRRFR
Sbjct: 65 PCSHPEDRPAPETEDEXXVAVFEYTDRILAXVRPRQLLFIAIDGVAPRAKXNQQRSRRFR 124
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+S++AA E + +E +++G + + + +DSN ITPGT F L+ +L+YYI
Sbjct: 125 SSREAALKEEELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFXDTLAKSLRYYII 184
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+LN+DP W ++ ILSDA+VPGEGEHKI ++R QR P YDPNT H +YGLDADLI L
Sbjct: 185 NKLNSDPCWRNVRFILSDASVPGEGEHKIXEFIRSQRVKPEYDPNTHHVVYGLDADLIXL 244
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP- 298
LATHE HF +LRE VF Q G E + K D+ + VP
Sbjct: 245 GLATHEPHFRVLREDVFF-----------QQGSTKKTKEERLGIK--RLDDVSETNKVPV 291
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKP+ +L++ LREYL+ E +PN PF DLE +DD++F FFVGNDFLPH+P+L+IR+
Sbjct: 292 KKPFIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRD 351
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF----QKRARLHQR 414
GA+ L +++ GGYLT +L R E + AVG+ ED IF Q+ R ++
Sbjct: 352 GAVERLTEIWRASLPHXGGYLTLDGSVNLARAEVILSAVGNQEDDIFKRLKQQEDRRNEN 411
Query: 415 HAERIKREKAQARRG--DDV--EPLAQPDSLVPVSRFHGSRLASGP--------SPSPYQ 462
+ R +RE Q D+V + + S V+ + + + P +P+P
Sbjct: 412 YRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVDTKPPKKTQKIDAPAPVD 471
Query: 463 QSECVGRLDN-GKGTSGRPHKVPRLSS--GATIGAAIVEAENSFETDPQENKEEFKAKLK 519
+ N G + R R ++ G + AA V + N + + L+
Sbjct: 472 LVNLSEKTSNRSLGATNRELINNRAANRLGLSREAAAVSSVNKLAASALKAQLVSNETLQ 531
Query: 520 ELLRDKSDAFNSDNPEEDKVKLGEP------------GWKE---------------RYYE 552
+ + S A +S + D ++ P G K R YE
Sbjct: 532 NVPLEDSIASSSAYEDTDSIESSTPVVHPIDTKVSNVGQKRKAPDSTEENENTDTVRLYE 591
Query: 553 EKFNAK--------TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+ + +P+E E+ R + V Y GLCWV+ YYY+G SW W+YPYHYAPFA
Sbjct: 592 PGYRERYYEQKFHISPDEPEKIR-EAVKHYVHGLCWVLLYYYQGCPSWTWYYPYHYAPFA 650
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
+D KDL ++ FEL PFKP+ QLLGV P+AS + LPE + L TD NS I DFYP +F
Sbjct: 651 ADFKDLASIDVKFELNQPFKPYEQLLGVLPAASKNNLPEKLQTLXTDENSEIIDFYPENF 710
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS 724
+D+NGK++ WQG+A LPFIDE RLL+ V KI LTEEE++RN + +LF+ HP
Sbjct: 711 TIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESKRNEDGSTLLFISEHHP-- 768
Query: 725 ASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
E KQL K+R +L+ + + G+ G ++
Sbjct: 769 ----XFSELVKQLYSKKRQGKPLKLSGKXAHGLFGKVN 802
>gi|429329440|gb|AFZ81199.1| 5'->3' exoribonuclease, putative [Babesia equi]
Length = 828
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/732 (42%), Positives = 429/732 (58%), Gaps = 84/732 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIE---EEPVVIDGVK-IPVDTSKPNPNGLEYDNLYLDMN 56
MGVP FYRWL +YP V D I+ E + + ++ I VD PNPNG E+DNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDTIDNYKETSIDMSNIETIGVDLLSPNPNG-EFDNLYLDMN 59
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
GIIHPC HPE+ P + + +F+C+FDYIDR+F +VRPRK++++AIDGVAPRAK+NQQRS
Sbjct: 60 GIIHPCCHPENMEQPESEEVMFECIFDYIDRIFYIVRPRKIMFLAIDGVAPRAKINQQRS 119
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRF+++ DA +L +EF ++ +P + D +DSNVITPGT FM LS +
Sbjct: 120 RRFKSAADADLEDEVYNKLVEEFGKKKGDIPIRKDK--WDSNVITPGTPFMHELSKRIVD 177
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
YI R+ W++I VI SD+ VPGEGEHKIM ++R QR+ P YDPNT+H L+G+DADL
Sbjct: 178 YIQDRIEKYDAWKRITVIFSDSGVPGEGEHKIMKFIRNQRHAPNYDPNTKHVLHGMDADL 237
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK------RKAGEFDE 290
IML LATHEV+F ILRE+V F+ +P AN +AK + +
Sbjct: 238 IMLGLATHEVNFFILREIVTN-------FINFKPEDNVANQIEQAKSVVPKEKPTSSHQQ 290
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE----IDLECIVDDFIFMCFFVGND 346
+ KP QFL + LREYL Y+ PN + ID E VDD + MCFF GND
Sbjct: 291 YISLMRQSWKPMQFLQLPVLREYLSYQLHFPNGWRDREGVIDFERCVDDLVLMCFFCGND 350
Query: 347 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
FLPH+P++ I G+I+ ++ +Y+K LG YL++ ++ +V F+ + E+++F+
Sbjct: 351 FLPHLPSISITGGSIDQMILLYQKILPDLGDYLSNEGDLNMPQVGSFVSYLSKIENQVFK 410
Query: 407 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 466
+ Q H ER KR+ Q + +++F
Sbjct: 411 QA----QEHKERYKRKMQQNGNSE-------------IAQF------------------- 434
Query: 467 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 526
G +K +L G+ A++ E + + EFK + +E+L+ +
Sbjct: 435 -----------GNVNKNRKLDDGS---ASVEPKEEGY------TEAEFKRRQEEILKQER 474
Query: 527 DAFNSDNPEEDKVKLGEPG-WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 585
D E + L +P WKE YY EKFN ++ +VV Y EGL WV+ YY
Sbjct: 475 TV--EDPKEPIDLSLNDPKLWKEAYYREKFNLGPNDDVTSLVNNVVFHYVEGLAWVLKYY 532
Query: 586 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 645
Y+G SW WFYP+HYAPF SDLK + +I FELG PF F QL+ V P SSH LP+ +
Sbjct: 533 YQGCVSWGWFYPFHYAPFCSDLK-FEGLDIKFELGKPFTAFQQLMSVMPIRSSHCLPKEF 591
Query: 646 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 705
R+LMTD NSP++DFYP F+ D NGKRY +Q +A LPFIDE RLL+ V+ IE +L++ +
Sbjct: 592 RELMTDSNSPLADFYPLKFKEDPNGKRYKYQWVALLPFIDEKRLLNIVEPIEKSLSKVDK 651
Query: 706 RRNSIMADMLFV 717
RN+I D++F+
Sbjct: 652 DRNAISKDLIFM 663
>gi|195577157|ref|XP_002078439.1| GD23438 [Drosophila simulans]
gi|194190448|gb|EDX04024.1| GD23438 [Drosophila simulans]
Length = 842
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 322/739 (43%), Positives = 416/739 (56%), Gaps = 82/739 (11%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPC HPED+PAP DE+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIA 173
RSRRFRA+K+ + E R+R+E G KLPP K FDSN ITPGT FM LS
Sbjct: 61 RSRRFRAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKC 120
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L Y++H RLNN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G D
Sbjct: 121 LHYFVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGAD 180
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
ADLIML LATHE +F+I+RE F P + C +C GH C G + K D
Sbjct: 181 ADLIMLGLATHEPNFTIIREE-FLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPD 239
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ + + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLPH+P+
Sbjct: 240 VPIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPS 299
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIREGA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R R +
Sbjct: 300 LEIREGAVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREE 359
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
+ R K K Q R D L Q S F S A GP+ Q + VG
Sbjct: 360 QFKARDKARKRQ-ERNQDHGSLNQ-------SAFGAS--AVGPN----SQQKSVG----- 400
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFN--- 530
N +E A L+ R SD N
Sbjct: 401 ------------------------------------NYKEEAAALRNRKR-TSDMANLDD 423
Query: 531 -SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 589
+ D+V+L E G+K+RYYE KF+ + + R V L+Y GLCWV+ YYY+G
Sbjct: 424 EDEEENNDEVRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQGC 481
Query: 590 CSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKL 648
SW W++PYHYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + KL
Sbjct: 482 ASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKL 541
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
M+DP SPI DFYP DF++D+NG+ +A LPF+DE RL + LT EE +RN
Sbjct: 542 MSDPESPIIDFYPEDFKIDLNGR------MALLPFVDEKRLFKALVPYYDQLTGEEVKRN 595
Query: 709 SIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 768
+ L++ P H K++K + + DGM G + +
Sbjct: 596 KRGDNYLYISNQSP----------HYKKVKKVSEKDDESVCKAISFDGMRGTLGSTELNT 645
Query: 769 H-PPVFRSPVASMEDIMGN 786
+ +SP++ + DI N
Sbjct: 646 AISGILKSPISGLSDINDN 664
>gi|320586314|gb|EFW98993.1| RasGAP [Grosmannia clavigera kw1407]
Length = 3016
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 323/818 (39%), Positives = 445/818 (54%), Gaps = 128/818 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ V+E++P + DG IPVDTS PNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEQQPQTMEDGTIIPVDTSGPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDA-ADSAAEEERLRQEFEREGRKLPPKS----DSQVFDSNVITPGTEFMAVLSIAL 174
R++++A ++E L+ ++ G LP ++ + FDSN ITPGT FM +L+ +L
Sbjct: 121 RSAQEAQEKEEDKKELLKLLKQQNGGVLPTETLETAAKKAFDSNSITPGTPFMDILAASL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ H +YGLDA
Sbjct: 181 RYW-------------------------------------------------HVIYGLDA 191
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML+LATHE +F +LRE V F + C LCGQ GH A+ C+G+ K K GEFDEK
Sbjct: 192 DLIMLSLATHEPYFRVLREDVFFQDSKARTCRLCGQKGHEASACKGEVKEKDGEFDEKDK 251
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
E P KP+ +LH+ LREYL E +P PF DLE +DD+IF+C FVGNDFLPH+P
Sbjct: 252 E--HPLKPFIWLHVSVLREYLAVELDVPGLPFRWDLERAIDDWIFLCCFVGNDFLPHLPA 309
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIRE IN L ++K + + GY+T L R ++ + + ED IF++R +
Sbjct: 310 LEIRENGINTLTGLWKDNLQYMNGYVTKDGHVDLERAQYIMSGLAKQEDGIFRRRKQQED 369
Query: 414 RHAERIKREKAQARRGDD----------------------VEPLA----QP------DSL 441
R E KR + Q + G + P+A +P D +
Sbjct: 370 RREENAKRRRLQEKNGRGNPRNSDKPGGDRRFAESTAGLHLHPIANFPQKPTPSVTYDMV 429
Query: 442 VPVSRFHGSRLAS---------------GPSPSPYQQSECVGRLDNGKGTSGRPHKVPRL 486
V S + +A+ G S S +E N K +G
Sbjct: 430 VNRSAVQEANVANKSAAAVLRDRILAAQGESKSETPSTETDSPTANDKVEAGTA-TTAEG 488
Query: 487 SSGATIG---AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGE 543
SS A +G AA++EAE E+ P K A S+ D V++ +
Sbjct: 489 SSLAALGKRKAALMEAEGGGESTPASGASTPK------------AVASEEGPVDTVRMWD 536
Query: 544 PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 603
G+ RYYE+KF+ P + E R V Y EGL WV+ YY++G SW+W+YPYHYAPF
Sbjct: 537 EGYANRYYEQKFHVD-PRD-VEFRHGVARSYVEGLAWVLLYYFQGCPSWEWYYPYHYAPF 594
Query: 604 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
A+D DL + ++ F+ G +PF QL+ V P+AS HA+PE + LMT+ +S I DFYP D
Sbjct: 595 AADFVDLGKMDLVFQKGRISRPFEQLMSVLPAASRHAIPEIFHDLMTNEDSEIIDFYPVD 654
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL 723
F++D+NGK+++WQG+A LPFID RLL V+K L+ E+ RN + + +LLS
Sbjct: 655 FDIDLNGKKFAWQGVALLPFIDMKRLLAAVEKKYPLLSPEDQVRNGV--GKVVMLLS--- 709
Query: 724 SASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
A+ DE K + +LNP +S G+ G +
Sbjct: 710 DANTELYDEITGHFYSKRQGTTNFKLNPRISAGLAGMV 747
>gi|440792617|gb|ELR13826.1| exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1110
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 298/640 (46%), Positives = 394/640 (61%), Gaps = 46/640 (7%)
Query: 111 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 170
MNQQRSRRF+A K++ + A +E + QE R G+++PPK D FDSN ITPGT FMA +
Sbjct: 1 MNQQRSRRFKAIKESKEKAEKEAEIVQEMIRMGKEIPPKEDKPHFDSNTITPGTPFMAKV 60
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
+ +LQYYI RL DPGW+ IKVILSDA+VPGEGEHKIM Y+R QR+ P Y+PNT H LY
Sbjct: 61 AQSLQYYIKERLLTDPGWKGIKVILSDASVPGEGEHKIMDYIRYQRSQPEYEPNTSHVLY 120
Query: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
GLDADLIMLALATHE HF ILRE+V ++ CF+CGQPGHLA++C+GKAK K + D
Sbjct: 121 GLDADLIMLALATHEPHFFILREIVMQ-ANENNCFICGQPGHLASDCQGKAKEKGNDTDT 179
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP---PFEIDLECIVDDFIFMCFFVGNDF 347
K +KP+QFL++ LREYL + + PFE DLE I+DDF+FMCFFVGNDF
Sbjct: 180 KA----AIRKPFQFLYVSVLREYLTRDLKPSQAQQLPFEFDLERIIDDFVFMCFFVGNDF 235
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
LPH+PTLEIRE AI++L+ +YK+ LGGYLT + LRRV+ ++ VG ED I +
Sbjct: 236 LPHLPTLEIRENAIDMLVRIYKRILPTLGGYLTHDGEVDLRRVKVLMEEVGRLEDSILVE 295
Query: 408 RARLHQR-HAERIKREKAQARRGDDVEP-LAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 465
R R QR R + + + R+ +D+E +A P Q++
Sbjct: 296 RRRKEQRAKENRRRGRERRKRQREDLENFIANPKD---------------------QEAN 334
Query: 466 CVGR----LDNGKGTSGRPHKVPRLSS------GATIGAAIVEAENSFETDPQENKEEFK 515
G+ + GK P + ++ G G E E E P +
Sbjct: 335 TGGKRAKHFEAGKEELITPSNLDAAAALKKQLFGDDDGTTQTETEMVTEKKPPAEIQSAS 394
Query: 516 AKLKELLRDKSDAFNSDNPE---EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 572
A K + + + D E D V+LG+PGWKERYY+ KF+ + + +E K V +
Sbjct: 395 AAYKTAIAAQGKPRDPDEEEPEIPDDVRLGDPGWKERYYKLKFDVEITD--KEFIKKVAM 452
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 632
YTEGL WV+ YYY+G SW WFYP+HYAPFA D+ +D + ELG PFKPF QL+GV
Sbjct: 453 EYTEGLVWVLRYYYQGCSSWGWFYPFHYAPFADDMTLIDDESPKHELGKPFKPFEQLMGV 512
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
P+ S LP + +M P SPI DFYP DF +DMNGKR++WQ +A LPFIDE RL +
Sbjct: 513 LPAESGTCLPMKCQVMMRHPQSPIIDFYPNDFALDMNGKRWAWQAVALLPFIDENRLKEV 572
Query: 693 VKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDE 732
+K+ E + EE RN + ++FV SHPL+++ L++
Sbjct: 573 MKECEPHFSAEEQERNKLGNHLIFVHASHPLASTFKALED 612
>gi|50550657|ref|XP_502801.1| YALI0D13750p [Yarrowia lipolytica]
gi|74634562|sp|Q6C961.3|XRN2_YARLI RecName: Full=5'-3' exoribonuclease 2
gi|49648669|emb|CAG80989.1| YALI0D13750p [Yarrowia lipolytica CLIB122]
Length = 1010
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 313/811 (38%), Positives = 446/811 (54%), Gaps = 102/811 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIP-VDTSKPNPNGLEYDNLYLDMNGII 59
MGVP YR L++K P +V+DVIE+E ++DG +IP D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPGLYRHLSQKCPKIVSDVIEDETTIVDGEEIPGSDYSAPNPNG-ELDNLYLDMNGIV 59
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE AP + DE+ +F Y +R+ + RPRK+L MAIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEGEEAPPSEDEMLLAVFKYTERVLNVCRPRKVLMMAIDGVAPRAKMNQQRARRF 119
Query: 120 RASKDAA---DSAAEEERLRQEFEREGRKLPPKSDSQV--------------FDSNVITP 162
R++KDAA +S E E + E + KS + +DSN ITP
Sbjct: 120 RSAKDAAIEAESTLESELKAKTIELQSSGEKGKSLETILDEFKQGLVNKPGKWDSNAITP 179
Query: 163 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 222
GT FM L+ AL+Y++ +LN +PGW +KV++SDA VPGEGEHKIM ++R QR P Y+
Sbjct: 180 GTPFMEKLAAALRYWVGYKLNTEPGWRDLKVVISDATVPGEGEHKIMEFIRSQRGDPTYN 239
Query: 223 PNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK 282
NT HC+YGLDADLI L LATHE F +LRE VF +Q+K GH
Sbjct: 240 ANTSHCIYGLDADLIFLGLATHEPKFKLLREDVF---RQNKT-----AGH---------- 281
Query: 283 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMC 340
KKP+ +L+I LREYL + R +P +I DLE +DD++F+C
Sbjct: 282 ---------------QKKPFIWLNIDILREYLREDLRFTHPQTKIPFDLERAIDDWVFLC 326
Query: 341 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 400
FFVGNDFLPH+P ++R+G+IN+L+ +K Y+T +L + + ++ +
Sbjct: 327 FFVGNDFLPHLPACDVRDGSINVLVNQWKNGMTRWKDYITCDGHVNLAQAQDLLKNFATQ 386
Query: 401 EDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSP 460
E RI +HQ +R++ EK+QA + + L R G + A P
Sbjct: 387 EQRIL-----VHQEQ-DRVEYEKSQANKAAKQQAHRDSKKL----RQQGEQAALESMPLY 436
Query: 461 YQQSECVGRLD-NGKGTSGRPHKVP---------------RLSSGATIGAAIVEAENSFE 504
+ E VG + + G+ + + L G+ GA E
Sbjct: 437 DTKGESVGDVQLTNRELVGQRNDITLANLANQDAADKLRFMLKRGSDTGAEEPAKRAKIE 496
Query: 505 TDPQENKEEFKAKLKELLRDKSDAFNSD--NPE---------EDKVKLGEPGWKERYYEE 553
+P+E E ++ + S A ++D NP D V+ + G+ ERYY
Sbjct: 497 EEPKE-AESNSSEATPPTANPSIANDADLSNPNVTVHETTGYADHVQFHKSGYTERYYMN 555
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF+AK +E + R+ V Y +G+CWV+ YYY G SW WFYPYHYAP A D +
Sbjct: 556 KFHAKE-DEVDNLRRQVAEEYMKGVCWVLMYYYHGCQSWSWFYPYHYAPLAGDFDQISNM 614
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
+ F PF+P+ QL+ V P+AS H LP +R LM++ NSPI D+YP +F++D+NGK+
Sbjct: 615 KVEFGESAPFRPYEQLMSVLPAASGHNLPAVFRPLMSEENSPIIDYYPENFQLDLNGKKQ 674
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
W+ + LPFI+ LL+ V+ LT EE RN++ + +++ H L TL+
Sbjct: 675 EWKAVVLLPFINADHLLEHVQAKYTELTPEEKDRNTLREE---IVIFHRLGKYAKTLE-- 729
Query: 734 CKQLKIKERVEVKER---LNPELSDGMNGYI 761
K+ +++ V V ++ LN + G+ G +
Sbjct: 730 -KRGLMEKGVIVSKKPLVLNSHETSGLAGTV 759
>gi|169606446|ref|XP_001796643.1| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
gi|160706992|gb|EAT86095.2| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
Length = 1021
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 319/758 (42%), Positives = 434/758 (57%), Gaps = 62/758 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP +V+ V EE+P + IPVD + PNPNG E+DNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEEQPKKVGDEVIPVDRTGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP T ++ +F+Y DR+ MVRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEER------LRQEFEREGRKLPPKSD--SQVFDSNVITPGTEFMAVLSI 172
A+++A + +EER L + G + + + +DSN ITPGT FM +L+
Sbjct: 121 AAREAKEK--DEERAEFLKMLNSQKASRGEDINSLEEVVEKTWDSNAITPGTPFMHLLAE 178
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
+LQY+ + DP W+ +KVI+SDA+VPGEGEHKIM++VR QR +P +DPNTRH +YGL
Sbjct: 179 SLQYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFVRSQRAIPTHDPNTRHVIYGL 238
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCE----GKAKRKAGE 287
DADLIML+LATHE HF +LRE VF +DK C CG+ GH+ NCE GK K E
Sbjct: 239 DADLIMLSLATHEPHFRVLREDVFFDSGKDKACTRCGRKGHIRNNCEFPDDGK-KLTEEE 297
Query: 288 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 347
E+ P KPY +LH LREYL E P F+ DLE +DD++FMCFFVGNDF
Sbjct: 298 AAEEWAASEHPPKPYIWLHTNILREYLAVEMETPKRRFKYDLERSLDDWVFMCFFVGNDF 357
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
LPH+P+LEIR+ I+LL+++++ + Y+T P +RRV+ + A+ S E IF+K
Sbjct: 358 LPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGFPDMRRVQQILGALASREADIFKK 417
Query: 408 RARLHQRHAERIKREKAQAR-----RGDDVEPLAQPDSLVPVSRFHGSRLASGP---SPS 459
R + R A R +AQ RGDD P V S + L SG P
Sbjct: 418 RKEVSDRQAANRARREAQQNGRGRGRGDDTYSSGPPQKRVKEST--DTYLNSGTIFFDPK 475
Query: 460 PYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLK 519
Q ++ R D+ S P + + G + D E+ +
Sbjct: 476 DAQSNDT--RRDHAAMRSPMPEAEGTQETDSATGVEAPVELGKRKADELEDADNGTPGRN 533
Query: 520 ELLRDKSDAFNS----DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 575
+ S A + D ED +KL E G++ERYYE+KF+ P++ R V +Y
Sbjct: 534 TPVVPASPAAETPKKEDGTPEDTIKLWEDGYEERYYEQKFHV-APDDI-AFRNKVARQYA 591
Query: 576 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASD---LKDLDQFNISFELGHPFKPFNQLLGV 632
EGLCWV+ YY +G SW W++P+HYAPFA+D L+D+D + FE G PF P+ QL+ V
Sbjct: 592 EGLCWVLAYYMQGCPSWTWYFPHHYAPFAADFVGLEDMDPRKL-FEKGTPFHPYEQLM-V 649
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
P S L + ++ YP E+ + ++ + G L F E L D+
Sbjct: 650 LPFIDSKRLLD-----------AMATKYP---ELSDDERKRNEFGKETLMFSQEGGLFDD 695
Query: 693 VKKI-------EHTLTEEEAR--RNSIMADMLFVLLSH 721
V+K +H++ ++R I LFVL S
Sbjct: 696 VEKALYRKGVKKHSIDPAQSRALHGDIEPHDLFVLDSQ 733
>gi|183235666|ref|XP_657072.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169800426|gb|EAL51687.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449701673|gb|EMD42445.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 937
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 294/723 (40%), Positives = 415/723 (57%), Gaps = 96/723 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPV-----DTSKPNPNGLEYDNLYLDM 55
MGVP+F+RWL++K+P +IDG + D ++PN NG+EYDN Y+DM
Sbjct: 31 MGVPSFFRWLSQKFP-----------KIIDGCQGSFHEQYNDLNEPNFNGVEYDNFYIDM 79
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NG+IHPCFHP+DR +P T +++ + Y+D L +VRPRKLLY+A+DGVAPRAKMNQQR
Sbjct: 80 NGLIHPCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQR 139
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
SRRF+++KDA ++ + + R G LP + DSN ITPGTEFM+V+S L+
Sbjct: 140 SRRFKSAKDAENAELKHAEENRNKVRNG--LPEVPYIKPLDSNCITPGTEFMSVVSKTLK 197
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN HC+YGLDAD
Sbjct: 198 KYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDAD 257
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML+LATHE FSI+RE VF +Q++C++C H C +++ G D
Sbjct: 258 LIMLSLATHERFFSIIREKVFF--EQEQCYICNNI-HSPDKC--PHRKEVGAMD------ 306
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLPH+P+L+
Sbjct: 307 -TITKPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPHIPSLD 361
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
IR+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K+ + + +
Sbjct: 362 IRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKNY 420
Query: 416 AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKG 475
A+R RLDN
Sbjct: 421 AKR--------------------------------------------------RLDN--- 427
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
R ++ + + E+ N+ + QE + +A++K+ + D+ +D +
Sbjct: 428 -QIRELEIKKANVYENSTLKSTESINTLTPEQQEQLKTQEAEIKK-IEDEERKLRADFEQ 485
Query: 536 E---DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
+ D+VKLGEPG+ +RYY KF P++ + +D+V Y EG+ WV+ YYY+G SW
Sbjct: 486 KELTDEVKLGEPGYTQRYYSVKFKI-DPQKDTQKIRDIVHSYFEGMNWVLGYYYKGCQSW 544
Query: 593 QWFYPYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
W+YPY YAPFA D+ + +N I ++ PF+PF QL+ V P S LP + LM
Sbjct: 545 DWYYPYLYAPFAEDMGEYVDYNFEIKYKESIPFRPFEQLMSVLPPRSKSCLPYQFHDLMK 604
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
SPISDFYP FE+D NG++ ++ I L FID+ +LL V+ IE LT E +RN
Sbjct: 605 SKGSPISDFYPDTFELDFNGEKVDYKAIVVLTFIDQEKLLHYVEPIEMGLTGELRQRNRR 664
Query: 711 MAD 713
D
Sbjct: 665 YGD 667
>gi|308805434|ref|XP_003080029.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
gi|116058488|emb|CAL53677.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
Length = 1057
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/466 (58%), Positives = 335/466 (71%), Gaps = 21/466 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWL++KYP +V DV+E+EP+ G + +D S+ NPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLSQKYPKIVEDVVEDEPMDELGRAVALDASRANPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRPAPTT EVF+ +FDYIDRLF+M+RPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPAPTTEGEVFENIFDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+++A + A EEE+LR++ REG K+ PK +S VFDSNVITPGT FM LS AL+YY+H
Sbjct: 121 AAQEAKEKAMEEEKLREKLTREGVKVQPKVESGVFDSNVITPGTPFMGRLSEALKYYVHD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW I+VI SDA+VPGEGEHK M Y+R QR LPG +PNTRH +YGLDADLIML
Sbjct: 181 RLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE HF ILRE+VF ++D P L E K+ V + +K
Sbjct: 241 LATHEPHFWILRELVFQ--KKD----TNAPQTLGMGTEETKKK-----------VAIARK 283
Query: 301 PYQFLHIWTLREYLDYEFRIPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
PYQ L + LREYL E R P PF++D E + DDFIFMCFFVGNDFLPH PTLEIREG
Sbjct: 284 PYQLLSVSVLREYLALELRPVAPTPFKLDPERLFDDFIFMCFFVGNDFLPHSPTLEIREG 343
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+LLM +Y+ LGGYL +P+L VE+F+Q V +ED IFQKRA+ + R
Sbjct: 344 AIDLLMTLYRNLLPTLGGYLCADGRPNLPVVENFVQVVAQHEDAIFQKRAKKEAQMRSRR 403
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFH--GSRLASGPSPSPYQQ 463
REK +A+ D + A ++ P + + GS+LAS +P+ Q
Sbjct: 404 HREKQKAKDYYDRQRQAS-GTVGPSNSYALGGSKLASDRAPAAPDQ 448
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 185/287 (64%), Gaps = 9/287 (3%)
Query: 503 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 562
F+ + + + F +L+ ++++ D + D ++LGE GWK+RYYE K A TP+
Sbjct: 600 FKAGEEMDSKSFLKQLEGIVKNLGD---REGESPDTIRLGESGWKDRYYEAKMKA-TPQT 655
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 622
RE+ + +V+ Y GL WV YY+EG CSW WFYPYHYAPFASDL +L + FELG P
Sbjct: 656 REQIARGMVVEYVRGLIWVCRYYFEGCCSWGWFYPYHYAPFASDLTNLAGISTDFELGKP 715
Query: 623 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 682
FKPF+QL+GV P+ASSHALP Y LM+D +SPI DFYP DF++DMNGKR++WQ +A LP
Sbjct: 716 FKPFSQLMGVLPAASSHALPAAYAPLMSDKDSPIIDFYPEDFDLDMNGKRFTWQAVALLP 775
Query: 683 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKER 742
+ID RLL++ +E+TLT EE RRNSI + ++V +HPL+ LDE + E
Sbjct: 776 WIDSRRLLEQTDMLEYTLTAEEKRRNSINEEEIYVNTAHPLAKQFVKLDE-----REDED 830
Query: 743 VEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
E ++P+LSDGMN + + P SP++ DI NQV+
Sbjct: 831 AEKTLPMDPKLSDGMNATLVSVKREAKPSTIPSPISCRPDIQNNQVI 877
>gi|183233323|ref|XP_001913842.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801637|gb|EDS89385.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 869
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 293/720 (40%), Positives = 416/720 (57%), Gaps = 90/720 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL +++P ++ D +P + D ++PN NG+EYDN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDC---QPSSQEKYG---DLNEPNANGVEYDNFYIDMNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+DR +P T +++ + Y+D + +VRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPETIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGR---KLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
++KDA E LRQ + + R LP + DSN ITPGTEFM+V+S L+ Y
Sbjct: 115 SAKDA-----ENAELRQAEDNKKRLMNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKRY 169
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN HC+YGLDADLI
Sbjct: 170 IKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLI 229
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML+LATHE FSI+RE VF + D+C++C H C+ +++ G D ++
Sbjct: 230 MLSLATHERFFSIVREKVFF--EDDRCYICNGV-HPPDKCQ--RRKEVGAMD-----TII 279
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLPH+P+L+IR
Sbjct: 280 --KPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPHIPSLDIR 333
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K+
Sbjct: 334 DGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKC-------- 384
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
++EK A++ D + + +L+ K T
Sbjct: 385 --QKEKMNAKKNFDNQ---------------------------------MKQLEMRKATI 409
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENK--EEFKAKLKELLRDKSDAFNSDNPE 535
+K+ L S + E + +T E K E+ + +LKE L+
Sbjct: 410 ---YKINTLKSTEGMNELTPEQQEQLKTQEAEIKLIEQKENRLKERLKKAE--------T 458
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+D +K+GE G+ +RYY KF ++ ++ R D+V Y EG+ WV+ YYY+G SW W+
Sbjct: 459 KDLLKMGEVGYTQRYYSVKFKIDPKKDTQKIR-DIVHSYFEGMNWVLGYYYKGCQSWDWY 517
Query: 596 YPYHYAPFASDLKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
YPY YAPFA D+ + D F ++ PF+PF QL+ V P S LP+ + LM
Sbjct: 518 YPYLYAPFAEDMGEYVDDNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPQQFHDLMKSKG 577
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPIS+FYP F++D NG++ ++ I L FID+ +LL VK IE L + RRN D
Sbjct: 578 SPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRRNRRYGD 637
>gi|449709403|gb|EMD48677.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 869
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 293/720 (40%), Positives = 415/720 (57%), Gaps = 90/720 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL +++P ++ D +P + D ++PN NG+EYDN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDC---QPSSQEKYG---DLNEPNANGVEYDNFYIDMNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+DR +P T +++ + Y+D + +VRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPETIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGR---KLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
++KDA E LRQ + + R LP + DSN ITPGTEFM+V+S L+ Y
Sbjct: 115 SAKDA-----ENAELRQAEDNKKRLMNGLPEVPYIKPLDSNCITPGTEFMSVVSKTLKRY 169
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN HC+YGLDADLI
Sbjct: 170 IKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLI 229
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML+LATHE FSI+RE VF + D+C++C H C+ +++ G D ++
Sbjct: 230 MLSLATHERFFSIVREKVFF--EDDRCYICNGV-HPPDKCQ--RRKEVGAMD-----TII 279
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLPH+P+L+IR
Sbjct: 280 --KPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPHIPSLDIR 333
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K+
Sbjct: 334 DGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKC-------- 384
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
++EK A++ D + + +L+ K T
Sbjct: 385 --QKEKMNAKKNFDNQ---------------------------------MKQLEMRKATI 409
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENK--EEFKAKLKELLRDKSDAFNSDNPE 535
+K+ L S + E + +T E K E+ + +LKE L+
Sbjct: 410 ---YKINTLKSTEGMNELTPEQQEQLKTQEAEIKLIEQKENRLKERLKKAE--------T 458
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+D +K+GE G+ +RYY KF ++ ++ R D+V Y EG+ WV+ YYY+G SW W+
Sbjct: 459 KDLLKMGEVGYTQRYYSVKFKIDPKKDTQKIR-DIVHSYFEGMNWVLGYYYKGCQSWDWY 517
Query: 596 YPYHYAPFASDLKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
YPY YAPFA D+ + D F ++ PF+PF QL+ V P S LP + LM
Sbjct: 518 YPYLYAPFAEDMGEYVDDNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPYQFHDLMKSKG 577
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPIS+FYP F++D NG++ ++ I L FID+ +LL VK IE L + RRN D
Sbjct: 578 SPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRRNRRYGD 637
>gi|167383239|ref|XP_001736453.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165901153|gb|EDR27303.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 858
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 307/784 (39%), Positives = 441/784 (56%), Gaps = 99/784 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL +++P ++ D +P + D ++PN NG+EYDN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLKQRFPKIIDDC---QPSSQEKYG---DLNEPNTNGVEYDNFYIDMNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+DR A + +++ + Y+D L +VRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCLHPQDRQAAESVEDMMVLLTRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++KDA + AE ++ + R LP + FDSN ITPGTEFM+V+S L+ YI
Sbjct: 115 SAKDAEN--AELKQAEENRNRAKNGLPEIPYVRPFDSNCITPGTEFMSVVSKTLKKYIKE 172
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN HC+YGLDADLIML+
Sbjct: 173 RMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIMLS 232
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE FSI+RE VF +QD+C++C + H C +++ G D ++ K
Sbjct: 233 LATHERFFSIVREKVFF--EQDQCYICNKI-HPPDKCP--HRKEVGALD-----TII--K 280
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
P+QFLH LR YL ++ FE C VDDFIF CF VGNDFLP +P+L+IR+G
Sbjct: 281 PFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPRIPSLDIRDGG 336
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
++LLM VY +EF GGY+T+ ++ ++F++ VG E I +K + +
Sbjct: 337 VDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLREVGKEEPAILEK----------KYQ 385
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+EK A++ D + + Q + SR AS S + +E + L P
Sbjct: 386 KEKMNAKKNFDNQ-MKQLE----------SRKASIYENSTLKSTESINSLT--------P 426
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+ +L +I + EN KE FK E+D +K
Sbjct: 427 EQQEQLKIQEAEIKSIEQRENRL-------KERFKKA----------------EEKDLLK 463
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
+GE G+ +RYY KF P++ + +D+V Y EG+ WV+ YYY+G SW W+YPY Y
Sbjct: 464 MGESGYTQRYYNVKFKI-NPKKDTQKVRDIVHSYFEGMNWVLGYYYKGCQSWDWYYPYLY 522
Query: 601 APFASDLKDLDQFNISFELGH--PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
APFA D+ + +N F+ PF+PF QL+ V P S LPE + LM SPIS+
Sbjct: 523 APFAEDMGEYVDYNFEFKYKKSIPFRPFEQLMSVLPPRSKSCLPEQFHDLMKSKGSPISE 582
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP F++D NG++ ++ I L FID+ +LL VK IE L + RRN D +
Sbjct: 583 FYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKLKGDAKRRNRRYGDSYIFI 642
Query: 719 LSHPLS------------ASIY-----TLDEHCKQLKIKERVEVKERLNPELSD--GMNG 759
+ +SI+ T+D+ K+ K + KE L P ++ G++G
Sbjct: 643 GKDNVKYFTTIQTFKTACSSIWGLIKPTIDKLNKKDKKVPLSDYKELLTPIVNSQQGLSG 702
Query: 760 YISP 763
+I P
Sbjct: 703 FIIP 706
>gi|167376304|ref|XP_001733946.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165904779|gb|EDR29935.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 889
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 316/788 (40%), Positives = 446/788 (56%), Gaps = 107/788 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL++K+P ++ + D ++PN NG+EYDN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLSQKFPKIIDSCQGSFHEQYN------DLNEPNFNGVEYDNFYIDMNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+DR +P T +++ + Y+D L +VRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADS---AAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
++K+ D+ AEE R R LP + DSN ITPGTEFM+ +S AL+ Y
Sbjct: 115 SAKEVDDNERKQAEENR-----NRVMNGLPEIPYVRPLDSNCITPGTEFMSAVSKALKKY 169
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PN HC+YGLDADLI
Sbjct: 170 IKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLI 229
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML+LATHE FSI+RE VF +Q++C++C H C +++ G D ++
Sbjct: 230 MLSLATHERFFSIIREKVFF--EQEQCYICNGI-HSPDKC--PHRKEVGALD-----TII 279
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLPH+P+L+IR
Sbjct: 280 --KPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPHIPSLDIR 333
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
+GA++LLM VY +EF GGY+T+ ++ ++F++ VG E I + R + + +A+
Sbjct: 334 DGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLREVGKEEPAILETRNKKEKNYAK 392
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
R R Q R D+E L + + S L S +E + L
Sbjct: 393 R--RLDNQIR---DLE-------LKKANIYENSTLKS---------TESINSLT------ 425
Query: 478 GRPHKVPRLSSGATIGAAIVEAE-NSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
P + +L I EAE S E + ++ +EEF+ KEL
Sbjct: 426 --PEQQEQLK--------IQEAEIKSIENEERKLREEFEK--KEL--------------S 459
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D++KLGEPG+ +RYY KF P++ + +D+V Y EG+ WV+ YYY+G SW W+Y
Sbjct: 460 DELKLGEPGYIQRYYNVKFKI-NPKKDTQKVRDIVHSYFEGMNWVLGYYYKGCQSWDWYY 518
Query: 597 PYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
PY YAPFA D+ + +N I ++ PF+PF QL+ V P S LP + LM S
Sbjct: 519 PYLYAPFAEDMGEYVDYNFTIKYKESIPFRPFEQLMSVLPPKSKSCLPYQFHDLMKSKGS 578
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PIS+FYP FE+D NG++ ++ IA L FID+ +LL V+ IE LT E +RN D
Sbjct: 579 PISEFYPDTFELDFNGEKVDYKAIAVLNFIDQEKLLHYVEPIEMELTGELRQRNRRYGDS 638
Query: 715 LFVLLSHPLS--ASIYTLDEHCKQL--KIKERV-------------EVKERLNPELSD-- 755
+ + +I T C + IK + + KE L P ++
Sbjct: 639 YIFIGKDNVKYFTTIQTFKTTCSSIWGLIKPTIDKLNGEDKKVPLSDYKELLTPIVNSQQ 698
Query: 756 GMNGYISP 763
G++G+I P
Sbjct: 699 GLSGFIIP 706
>gi|156084528|ref|XP_001609747.1| XRN 5'-3' exonuclease protein [Babesia bovis T2Bo]
gi|154796999|gb|EDO06179.1| XRN 5'-3' exonuclease protein, putative [Babesia bovis]
Length = 988
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 298/730 (40%), Positives = 412/730 (56%), Gaps = 75/730 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV----VIDGVKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVP FYRWL +YP VV D ++ D + PNPNG E+DNLY+DMN
Sbjct: 1 MGVPTFYRWLCSRYPRVVHDAKDDSNENNFDFSDLESYGLALLSPNPNG-EFDNLYIDMN 59
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
G+IHPC HPE P + + +FQC+FDY+DRL ++RPRK+L++AIDGVAPRAKMNQQRS
Sbjct: 60 GLIHPCCHPEGLEQPPSEEVMFQCIFDYLDRLMYIIRPRKILFLAIDGVAPRAKMNQQRS 119
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRF+++ +A A ++ EF + ++PPK +DSNVITPGT FM LS +
Sbjct: 120 RRFKSAAEADLEAEIYSKVAAEFAQRNVRIPPKESR--WDSNVITPGTPFMHELSKRVVA 177
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
YI R + W +I VI SDAN PGEGEHKIM+++R QR+ YDPNT+H L+G+DADL
Sbjct: 178 YIKERRDMYEAWSRIHVIYSDANSPGEGEHKIMNFIRNQRHSDQYDPNTKHVLHGMDADL 237
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML LATHEV+F I+RE+V K + + + D K +
Sbjct: 238 IMLGLATHEVNFYIIREIVSNLNPTKKA-----EDEIRKSIAVAQTSRPQLKDIKSYRSM 292
Query: 297 VPK--KPYQFLHIWTLREYLDYEFRIP-----NPPFEIDLECIVDDFIFMCFFVGNDFLP 349
+ + KP QFL + LREYL ++ P ID E +DD + MCFF GNDFLP
Sbjct: 293 LRQNWKPLQFLRLPVLREYLSHQLYFPRGWSRGNSGPIDFERCIDDLVLMCFFCGNDFLP 352
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P++ I+ G+I+ ++ +Y+ LG YLT+ + + ++ F+ + + ED++F+
Sbjct: 353 HLPSISIQGGSIDQMILLYQSLLPDLGDYLTNEGEINFPQLGAFVSYIANVEDQVFKAEQ 412
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 469
QR ++++R + GD+ E Q VSR P+ + +
Sbjct: 413 EFKQR--QKMRRLQHS---GDNTENKDQ------VSR-----------PTDFDNAGGETV 450
Query: 470 LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAF 529
L N ++ L++G I EFK + ELL+ + +
Sbjct: 451 LKNQDSST--------LNNGLEI--------------------EFKKRCAELLKQEREV- 481
Query: 530 NSDNPEED-KVKLGEP-GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 587
D+P E + L +P WKE YY +KF ++ E V Y +G+CWV+ YYY+
Sbjct: 482 --DDPVEPIDLSLNDPVRWKETYYRKKFGLCESQDVWEFASQVANHYIKGMCWVLRYYYQ 539
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 647
G SW W+YP+HYAPF SDL + + +F+ G PF PF QL+ V P SSH LPE R
Sbjct: 540 GCTSWGWYYPFHYAPFCSDL-NFEGLEFTFDYGKPFTPFQQLMSVMPIRSSHCLPEQLRH 598
Query: 648 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 707
LMTD +SPI+DFYP F+ D NGKRY +Q +A LPFIDE +LL+ V IE L +E R
Sbjct: 599 LMTDTDSPIADFYPIKFDEDPNGKRYKYQWVALLPFIDEKKLLNLVIPIEAILPKELQDR 658
Query: 708 NSIMADMLFV 717
NS DMLF
Sbjct: 659 NSEKKDMLFA 668
>gi|190345269|gb|EDK37129.2| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/671 (42%), Positives = 399/671 (59%), Gaps = 59/671 (8%)
Query: 77 VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLR 136
+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQRSRRFR++++A A+EE+ R
Sbjct: 1 MFLDVFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEA--KIADEEKQR 58
Query: 137 QEFEREGRKLP---PKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKV 193
Q ERE R + +DSN ITPGT FM L+ AL+Y++ +L +DPGW ++V
Sbjct: 59 QIKERELRGESIDEAIKGKRSWDSNAITPGTPFMDKLATALRYWVAYKLTSDPGWANVQV 118
Query: 194 ILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
I+SDA VPGEGEHKIM+++R QR+ P YDPNT+HC+YGLDADLI L LATHE HF +LRE
Sbjct: 119 IISDATVPGEGEHKIMNFIRSQRSDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLRE 178
Query: 254 VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREY 313
VF Q + + Q + A + A +KP+ +LHI LREY
Sbjct: 179 DVFA-NQSRQLRVSDQISMTQEQKDSLAAQDA-------------RKPFLWLHINVLREY 224
Query: 314 LDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFR 373
L+ E +P+ PF D+E +DD+IFMCFFVGNDFLPH+P+L++R+ I++L+ +K+
Sbjct: 225 LETELFVPHLPFTFDVERAIDDWIFMCFFVGNDFLPHLPSLDVRDNGIDILLGCWKRVVP 284
Query: 374 ALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREK---------- 423
L GY+T ++ VE + A+ E IF+KR +R E KR K
Sbjct: 285 KLKGYITCDGNLNVESVEKLMNALTYKEAEIFRKRHEQEKRREENDKRRKVFQEEDRALK 344
Query: 424 ----AQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+Q +G D PL D+ +P+ G + E +L N R
Sbjct: 345 NQYLSQVSKGQDKAPLV-ADTQMPLMTTSGEVV------------EGYAKLSNRDIVHHR 391
Query: 480 PHKVPRLSSGATIGA---AIVEAENSFETDPQENKEEFKAKLKELLRDKSDA--FNSD-- 532
S A A +++ TD Q+++ ++ E S S+
Sbjct: 392 DVITKANMSNAEAAAELKKLLDGGMDNSTDQQDSETNVQSNASETSEQPSRKRPLESELP 451
Query: 533 NPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
P+E D V++ EPG+ +RYY+ KF+ T EE +ETR+ +V Y EG+ W + YYY+G
Sbjct: 452 TPDENGDAVRMWEPGYHDRYYQTKFHLTTQEEIDETRRGLVRSYLEGISWALLYYYQGCP 511
Query: 591 SWQWFYPYHYAPFASDLKDLDQF----NISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
SWQW+YPYHYAPFA+D ++ I F+LG PF+P+ QL+ V P+AS H LPE +R
Sbjct: 512 SWQWYYPYHYAPFAADFVNVSDIIGEEGIKFDLGTPFRPYEQLMAVLPAASGHNLPEVFR 571
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LM++P+SPI DFYP +FE+DMNGK+ SWQGIA LPFI+E RLL ++ LT++E
Sbjct: 572 DLMSNPDSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEEKRLLSVLESKYPELTDDERD 631
Query: 707 RNSIMADMLFV 717
RN++ +++L +
Sbjct: 632 RNTLKSEVLVM 642
>gi|146419185|ref|XP_001485556.1| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 284/671 (42%), Positives = 402/671 (59%), Gaps = 59/671 (8%)
Query: 77 VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLR 136
+F +F Y DR+ +M RPRK+L +A+DGVAPRAKMNQQRSRRFR++++A A+EE+ R
Sbjct: 1 MFLDVFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEA--KIADEEKQR 58
Query: 137 QEFEREGRKLP---PKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKV 193
Q ERE R + +DSN ITPGT FM L+ AL+Y++ +L +DPGW ++V
Sbjct: 59 QIKERELRGESIDEAIKGKRSWDSNAITPGTPFMDKLATALRYWVAYKLTSDPGWANVQV 118
Query: 194 ILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
I+SDA VPGEGEHKIM+++RLQR P YDPNT+HC+YGLDADLI L LATHE HF +LRE
Sbjct: 119 IISDATVPGEGEHKIMNFIRLQRLDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLRE 178
Query: 254 VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREY 313
VF Q + + Q + A + A +KP+ +LHI LREY
Sbjct: 179 DVFA-NQSRQLRVLDQILMTQEQKDSLAAQDA-------------RKPFLWLHINVLREY 224
Query: 314 LDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFR 373
L+ E +P+ PF D+E +DD+IFMCFFVGNDFLPH+P+L++R+ I++L+ +K+
Sbjct: 225 LETELFVPHLPFTFDVERAIDDWIFMCFFVGNDFLPHLPSLDVRDNGIDILLGCWKRVVP 284
Query: 374 ALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREK---------- 423
L GY+T ++ VE + A+ E IF+KR +R E KR K
Sbjct: 285 KLKGYITCDGNLNVESVEKLMNALTYKEAEIFRKRHEQEKRREENDKRRKVFQEEDRALK 344
Query: 424 ----AQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
+Q +G D PL D+ +P+ G + E +L N R
Sbjct: 345 NQYLSQVSKGQDKAPLV-ADTQMPLMTTSGEVV------------EGYAKLSNRDIVHHR 391
Query: 480 P--HKVPRLSSGATIG-AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA--FNSD-- 532
K L++ A +++ TD Q+++ ++ E L S S+
Sbjct: 392 DVITKANMLNAEAAAELKKLLDGGMDNSTDQQDSETNVQSNASETLEQPSRKRPLESELP 451
Query: 533 NPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
P+E D V++ EPG+ +RYY+ KF+ T EE +ETR+ +V Y EG+ W + YYY+G
Sbjct: 452 TPDENGDAVRMWEPGYHDRYYQTKFHLTTQEEIDETRRGLVRSYLEGISWALLYYYQGCP 511
Query: 591 SWQWFYPYHYAPFASDLKDLDQF----NISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
SWQW+YPYHYAPFA+D ++ I F+LG PF+P+ QL+ V P+AS H LPE +R
Sbjct: 512 SWQWYYPYHYAPFAADFVNVSDIIGEEGIKFDLGTPFRPYEQLMAVLPAASGHNLPEVFR 571
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LM++P+SPI DFYP +FE+DMNGK+ SWQGIA LPFI+E RLL ++ LT++E
Sbjct: 572 DLMSNPDSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEEKRLLLVLESKYPELTDDERD 631
Query: 707 RNSIMADMLFV 717
RN++ +++L +
Sbjct: 632 RNTLKSEVLVM 642
>gi|430813360|emb|CCJ29283.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 741
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 296/745 (39%), Positives = 411/745 (55%), Gaps = 118/745 (15%)
Query: 24 EEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFD 83
E+P+ +DG I S PNPNG E+DNLYLDMNGI+HPC HPED+PAPT DE+ +F
Sbjct: 1 EKPIDVDGTLIYPSLSHPNPNGTEFDNLYLDMNGIVHPCTHPEDKPAPTNEDEMMLEIFK 60
Query: 84 YIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREG 143
Y +R+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFRA++DA A++ E + + G
Sbjct: 61 YTERIINMVRPRKLLMIALDGVAPRAKMNQQRSRRFRAAQDAEKKASDLEEFLKLLKASG 120
Query: 144 RKLPPKSD-SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPG 202
+ + + + +DSNVITPGT FM L+ +L+Y+I ++N+D W+ +KVI+SDA+VPG
Sbjct: 121 KSIDETLEKKKAWDSNVITPGTPFMDALAKSLRYWIIYKINSDVAWKNLKVIVSDASVPG 180
Query: 203 EGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQD 262
EGEHKIM ++R QR PGYDPNT+H +YGLDADLIML LATHE HF +LRE VF
Sbjct: 181 EGEHKIMEFIRSQRCSPGYDPNTQHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDANS 240
Query: 263 K-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP 321
K C +CGQ GH A C + E IP
Sbjct: 241 KGCHICGQIGHFAKECT------------------------------------EAELNIP 264
Query: 322 NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD 381
N F+ DLE +DD++ +CFFVGNDFLPH+P+L+I EGAI L ++K++ +GGYLT
Sbjct: 265 NTSFQFDLERAIDDWVCLCFFVGNDFLPHLPSLDIHEGAIETLGNIWKEKLHEMGGYLTM 324
Query: 382 GSKPSLRRVEHFIQAVGSYEDRIFQKRAR--LHQRHAERIKREKAQARRGDDVEPLAQPD 439
K L+R E +QA+G ED IF+KR ++ + + +DV+ + +
Sbjct: 325 DGKIDLKRAEIILQALGQQEDHIFRKRHEKLSSSKYIPYLPNDLIMPSNKEDVKMITITN 384
Query: 440 SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 499
++R +LA+ + + Q + + DN + T +SS IV+
Sbjct: 385 RNAVLNR-KNLKLANNTNKNAIQLLKEINN-DNSEETQ-------EISS-------IVKK 428
Query: 500 ENSFETDPQENKEEFKAKLKELLRD---KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN 556
+++ K K K D K ++ + +NP+ G P WK
Sbjct: 429 SYNYQNCAVSTKSSILGKRKADTLDDISKQNSAHDNNPDN-----GCPSWK--------- 474
Query: 557 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 616
W Y+Y APFASD K++ NI
Sbjct: 475 -----------------------WYYPYHY--------------APFASDFKNISSLNIQ 497
Query: 617 FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
FELG PF P+ QL+GV PSAS LP + LM + +S I DFYP +F +DMNGK++SWQ
Sbjct: 498 FELGKPFLPYEQLMGVLPSAS---LPRPLQSLMIEEHSEIIDFYPKEFPIDMNGKKFSWQ 554
Query: 677 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQ 736
G+ LPFIDE RLL ++K+ L+EEE RN+I D LF+ + L ++ C +
Sbjct: 555 GVVLLPFIDEKRLLKAIEKVYPQLSEEEKSRNTIGNDTLFISEGNALYDNLIL--SLCSK 612
Query: 737 LKIKERVEVKERLNPELSDGMNGYI 761
K E+ +LN +LS+G++G +
Sbjct: 613 KKDSEK---SIKLNTKLSNGLSGIV 634
>gi|281202869|gb|EFA77071.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 1091
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 307/801 (38%), Positives = 434/801 (54%), Gaps = 126/801 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+PAF+RW+ +KY ++ V +EP DG ++ D S+PN NG E+DNLYLDMNGIIH
Sbjct: 1 MGIPAFFRWMVDKYNGII--VPTKEPRHQDGSRVVCDNSEPNLNG-EFDNLYLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P ++ + +Y+D +F +VRPR LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCAHPEQGPKPRNTQDMMDSIMEYLDLVFAIVRPRNLLYMAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKDAADSAAEEERLRQE-------FEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSI 172
++ DA + +E + E E E L D + FDSN ITPGT FM ++++
Sbjct: 118 SALDARLTREKEAKELMENIANGKMSESEVEALQKAKDEKFHFDSNCITPGTMFMDLVAL 177
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L+ Y+ +++ DP W+ +KVI+SDA++PGEGEHKIM Y+R QR Y+PN ++ +YGL
Sbjct: 178 TLRSYVAEKVSTDPAWKNLKVIISDASIPGEGEHKIMDYIRKQRAQKDYNPNQKNVIYGL 237
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DADLIMLALATHE +F ILRE V T G++ + P + +G+ +EK
Sbjct: 238 DADLIMLALATHEPNFEILREFVQTKGRKQQS----TPKEMQGGDDGE--------EEKK 285
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
D + K YQ L + R+YLD E + +P F D+E ++DDFI +CFFVGNDFLPH+P
Sbjct: 286 DFLT---KDYQLLSLNLFRDYLDSELKC-SPAFGFDIERVIDDFILICFFVGNDFLPHLP 341
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
+L+I EGAI+ +M +YK YLT+ + S+ RV + E+ I +R
Sbjct: 342 SLQINEGAIDRIMKIYKDLLPTFDDYLTEDGEFSIDRVGKIFAKLAMVEEDIMMRRKSKE 401
Query: 413 QRHAERIKREKAQARRGDDVEPLAQ-PDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ R +AR + + L + P SL L SG + Q E L
Sbjct: 402 EAMIRR------KARMDGNFQQLQEDPQSL---------NLNSGTTK---QHQEAAKNLL 443
Query: 472 NGKGT----SGRPHKVPRLSSGATIGAA----------------------------IVEA 499
N T + RP+K R+ GA +A IVE
Sbjct: 444 NEIFTETDDTQRPNKKLRVEDGAANKSAAAKIREELLAQKKGTTSNKDAAKQLQQSIVEQ 503
Query: 500 ENSFETDPQENKEEFKAKLKELLR--------------------DKSDAFNSDNPEEDK- 538
+ D ++ E+ AK+ E++ ++ + NS+ E
Sbjct: 504 STTAPADGKKKGEKRGAKVIEIMEVPVEEKKLPSGNKKRKHGEEEEEEQSNSNGGEGQSL 563
Query: 539 -----------VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 587
VK+G GW+ERYY F ++ E+ + V Y +GL WV+ YYY+
Sbjct: 564 ESSTFIDRMKDVKIGTKGWRERYYNHHFESEAKED-DNVVLHVCQSYIDGLAWVLKYYYK 622
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNI------SFELGHPFKPFNQLLGVFPSASSHAL 641
G SW W+YPYHYAPF D+ + NI +F+LG PF+PF QL+ V P S +
Sbjct: 623 GCASWGWYYPYHYAPFIIDISE----NIELIKPATFDLGSPFRPFEQLMSVLPKESGQFV 678
Query: 642 PEHYRKLM-----TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
P+ Y+K+M + SPI FYP++F +D+ + W+G+ LPFIDE LL +K +
Sbjct: 679 PKPYQKMMGIDDGSGDVSPIIHFYPSNFMIDVQPSQPIWKGVCLLPFIDEKELLSSLKSL 738
Query: 697 EHTLTEEEARRNSIMADMLFV 717
E+ LT+EE RNS A++L V
Sbjct: 739 ENKLTDEEKFRNSQGAELLIV 759
>gi|118355816|ref|XP_001011167.1| XRN2 [Tetrahymena thermophila]
gi|89292934|gb|EAR90922.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1065
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 290/733 (39%), Positives = 409/733 (55%), Gaps = 90/733 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL + P + D E D NP E DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLCARNPQFILDAHENYE--------EFDAESNNP---EIDNLYLDMNGIIH 49
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC + P T ++F +F Y+D+L + RP+K+LYMAIDGVAPRAKMNQQR+RR
Sbjct: 50 PCCRSDGSVVPIAHTIQDMFNNIFLYVDKLMDLCRPKKILYMAIDGVAPRAKMNQQRARR 109
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFMAVLSIALQ 175
F+ +K+A + ++E L EF RE ++ + V FD+NVITPGT FM LS+ALQ
Sbjct: 110 FKGAKEAVELQQKKEELLNEF-RERSEINDDVLAFVQNRFDTNVITPGTAFMRDLSMALQ 168
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
+Y+ R+N P ++ IKVI SDA++PGEGEHKI+ ++R+QR+ YDPNT+HCLYG DAD
Sbjct: 169 HYVIERMNKHPLFKDIKVIFSDASIPGEGEHKILDFIRVQRDQQNYDPNTKHCLYGADAD 228
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE--FDEK-- 291
LIML L+THE +F I+RE + T ++ +C +C Q GH +C + +AG+ +K
Sbjct: 229 LIMLGLSTHEPYFYIIREQIITQ-EEKRCSICQQTGHFQMDCPNEMAVEAGQKPISQKIL 287
Query: 292 -GDEVVVPK---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLEC----------IVDDFI 337
E V K + +QF ++ +R+YL+ R F +LEC I+DDF+
Sbjct: 288 QAQEQKVRKGITQSFQFAKLYVMRQYLN--MRFSKVLFNDNLECKLKMQYDIERIIDDFV 345
Query: 338 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 397
FMCFFVGNDFLPH+P L IR+G I+ L+ +Y + YLT + +L++V ++ +
Sbjct: 346 FMCFFVGNDFLPHIPNLSIRDGGIDALLTLYDHTITQVDDYLTCNGELNLKQVAKLLENM 405
Query: 398 GSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS 457
E+ + + R R + + K + R ++ P S
Sbjct: 406 AIVEEDLMKFRKDKEDRDKKNQEINKEKEARLQELRPHI--------------------S 445
Query: 458 PSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAK 517
YQ+ RL + K I+ N E +
Sbjct: 446 EEEYQKKRKEWRLKDEKKVE------------------II------------NNESLLQR 475
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLG-EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTE 576
K +L ++S+ + ++ ++ +K YY +KF K PE+ + + + Y E
Sbjct: 476 FKRILSERSNEAKTIKEVKESTQITLNYNYKLSYYNDKFGVK-PEDFIQMQWLIKQSYVE 534
Query: 577 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA 636
LCW YYY+G SW W+YP+HY+PFASDL D+DQ I FE G PFKPF QLL VFP A
Sbjct: 535 ALCWNFAYYYKGCISWSWYYPFHYSPFASDLIDIDQHIIEFERGEPFKPFYQLLSVFPPA 594
Query: 637 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
S+ ++PE +R LM +P S I+DFYP DF VD+ GK++ W G LPFI+E RLL +K
Sbjct: 595 SALSVPECFRPLMIEPTSEIADFYPIDFYVDLIGKKFEWLGEVILPFIEEERLLRAARKY 654
Query: 697 EHTLTEEEARRNS 709
EH L+ EE +RN+
Sbjct: 655 EHLLSPEEKQRNT 667
>gi|412993025|emb|CCO16558.1| predicted protein [Bathycoccus prasinos]
Length = 1062
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/464 (57%), Positives = 333/464 (71%), Gaps = 24/464 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWL+ KYP ++ADV+E+E V I+G K+ VD+SK NPNG E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLSVKYPKIIADVVEDEVVDINGNKVFVDSSKSNPNGQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRP PTT +EVF +F+YI+RLF+M+RPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPPPTTEEEVFLNIFEYIERLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+++A + EEE+LR++ R+G ++PPK +S VFDSNVITPGT FM L+ AL++Y+
Sbjct: 121 AAQEAEEKKIEEEKLREKLRRDGIEVPPKIESGVFDSNVITPGTPFMGRLAEALKFYVRK 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQR---NLPGYDPNTRHCLYGLDADLI 237
+ N D GW+ IKVI+SDA+VPGEGEHK M Y+R QR N GYDPNTRH +YGLDADLI
Sbjct: 181 KQNTDKGWKNIKVIVSDASVPGEGEHKAMHYIRQQRACANGGGYDPNTRHVVYGLDADLI 240
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
MLALATHE HF ILREVVF QQ +P A N AG D+ ++ +
Sbjct: 241 MLALATHEPHFHILREVVF---QQ-------KPNESAQNG------GAGAIDKNAKQIAI 284
Query: 298 PKKPYQFLHIWTLREY--LDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+KP+Q L + LREY LD + F ID E + DDF+FMCFFVGNDFLPH PTLE
Sbjct: 285 ARKPFQLLSVTILREYLALDLSPHVLPQTFTIDRERLFDDFVFMCFFVGNDFLPHSPTLE 344
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
IREGAI+LLM +YK+E LGG+L + P+LRRV F++AV +E++IFQKRA+ +
Sbjct: 345 IREGAIDLLMTIYKQELGNLGGHLVEDGTPNLRRVGQFVRAVAQFEEQIFQKRAKREAQM 404
Query: 416 AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPS 459
R KREK +R+ SLV S GS AS +P+
Sbjct: 405 RSRRKREKDMSRQ---FYKKNNQGSLVGKSALGGSINASDRAPA 445
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 184/317 (58%), Gaps = 27/317 (8%)
Query: 479 RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK 538
+P ++PRL G + A+ F +L ELL K+D D E D
Sbjct: 613 KPSEIPRLKKGDAMEKAV-----------------FLKQLDELLEKKND--REDEMEADN 653
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
++LGE GWKERYY+ K + R + + +V + GL WV YYYEG CSW WFYPY
Sbjct: 654 IRLGEIGWKERYYDAKMGSHDLNSRRKVVRGMVEEFIRGLLWVCKYYYEGCCSWGWFYPY 713
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFA+D+ DL+ + FELG PFKPF+QL+GV P+AS+HALP + LMTD +SPI D
Sbjct: 714 HYAPFATDMVDLELISTEFELGKPFKPFDQLMGVLPAASAHALPPAFYPLMTDEDSPIID 773
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP F++DMNGKR++WQ +A LP+ID RLL E + ++ TLT EEA RN+I ++L+
Sbjct: 774 FYPKHFDLDMNGKRFAWQAVALLPWIDADRLLTETRNLDCTLTPEEANRNTINIELLYAH 833
Query: 719 LSHPLSASIYTLDEHCKQL---KIKERVEVKERLNPELSDGMNGYISPCA---GDPHPPV 772
+S + + ++ I+E+ +K + +DG G + P GD P
Sbjct: 834 EQLSISKCMLKIANVASKIDDEDIREKCALK--IPAADADGACGEVLPLKTLDGDCCPKQ 891
Query: 773 FRSPVASMEDIMGNQVL 789
SP+ E+I N+V+
Sbjct: 892 IESPMMREENINENRVV 908
>gi|224123990|ref|XP_002319214.1| predicted protein [Populus trichocarpa]
gi|222857590|gb|EEE95137.1| predicted protein [Populus trichocarpa]
Length = 692
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/433 (59%), Positives = 317/433 (73%), Gaps = 35/433 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+PAFYRWL EKYPL+ ADV+EE P++I+GV +P+DTS PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGIPAFYRWLTEKYPLITADVMEETPLLINGVSVPLDTSCPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPE P PTT++EVF +F YIDR+F ++RPRKLL+MAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEGLPPPTTYEEVFAAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-----FDSNVITPGTEFMAVLSIALQ 175
A++DAAD A E +G +P + + DSNVITPGTEFM +LS AL
Sbjct: 121 AARDAADQAL-------SIETDGGIVPESEEGNLEQVKKLDSNVITPGTEFMDLLSSALH 173
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YYI LR+ D GW IKVILSDANV GEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDAD
Sbjct: 174 YYIRLRMKEDLGWRGIKVILSDANVAGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDAD 233
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIMLALA+HE+HFSILRE G D Q G A N E
Sbjct: 234 LIMLALASHEIHFSILRERRKLNGDSD------QVGKFAENIENH--------------- 272
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ +QFL++W LREYL Y+ RIP+ ++DLE ++DDF+FMC FVGNDFLPH+P+LE
Sbjct: 273 -ISGMKFQFLNVWILREYLAYDLRIPDTTLKVDLERVIDDFVFMCLFVGNDFLPHIPSLE 331
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I EGAI+LLM VYKKEF +GGYLT+ + +L RVEHF+QA+GS+E IF++R ++
Sbjct: 332 ISEGAIDLLMTVYKKEFAQMGGYLTNSFEINLIRVEHFVQALGSHESAIFRRRNQVSLND 391
Query: 416 AERIKREKAQARR 428
E I+ ++ R+
Sbjct: 392 LE-IRFQRISKRQ 403
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/287 (51%), Positives = 192/287 (66%), Gaps = 1/287 (0%)
Query: 503 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 562
F Q + + + + + + + + +S + +D +KLG+ GWKERYY EKF AK+ +E
Sbjct: 381 FRRRNQVSLNDLEIRFQRISKRQQAFHSSKSLFDDGIKLGDEGWKERYYAEKFEAKSEDE 440
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 622
R+ R+ V +Y EG+CWVM YYYEGVCSWQWFYPYHYAPFASD DQ I F LG P
Sbjct: 441 RDTIRRHAVFKYVEGICWVMRYYYEGVCSWQWFYPYHYAPFASDFYGCDQLEIHFTLGEP 500
Query: 623 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 682
FKPF+QL+ V P+AS+HALP YRKLM D +SPI DFYPTDFE+D NGKR+SWQ I KLP
Sbjct: 501 FKPFDQLMAVLPAASAHALPLFYRKLMIDASSPILDFYPTDFELDNNGKRFSWQAICKLP 560
Query: 683 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKER 742
FI+E+RL+ E+ K+EHTLT+EE RRN + D+L V +SHPL+ + +L E CK
Sbjct: 561 FIEESRLVSEITKVEHTLTDEERRRNRLGYDVLCVHVSHPLAVKVISLFE-CKDQSALPT 619
Query: 743 VEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
K +++P++S GMNGYI P SP+ M I QV+
Sbjct: 620 ANGKLKIDPKISGGMNGYIYISEKPEWPLGIFSPIDGMLMIASEQVI 666
>gi|452818702|gb|EME25927.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 645
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 289/651 (44%), Positives = 390/651 (59%), Gaps = 59/651 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVV-----IDGVKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPAF+RWL+ KYP V+ DVIE +V G + +D ++PNPNG E+DNLYLDM
Sbjct: 1 MGVPAFFRWLSLKYPKVLCDVIE---LVGPYDQQQGDFVSIDPTEPNPNGREFDNLYLDM 57
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGIIHPC HPE+RP PTT +E+F+ +F YIDRL M+RPRKL+Y+A+DGVAPRAK+NQQR
Sbjct: 58 NGIIHPCTHPENRPPPTTEEEMFEEIFRYIDRLVYMIRPRKLVYLAVDGVAPRAKINQQR 117
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIAL 174
SRRFRA+K+A + E R+R E++++G ++P + + FDSNVITPGT FM LS+AL
Sbjct: 118 SRRFRAAKEAEEKQKELLRVRDEWKKKGLRVPEYDPNRKPFDSNVITPGTPFMTNLSVAL 177
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+ +I R+ +DP + KI VI SD++VPGEGEHKI ++R QR GYDPNT H LYGLDA
Sbjct: 178 KQFIADRVAHDPAYNKISVIYSDSSVPGEGEHKIAEFIRTQRAQEGYDPNTSHVLYGLDA 237
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLIMLALATHE++F +LRE VF QQ + QP E + + D +
Sbjct: 238 DLIMLALATHELNFYVLRERVFPSPQQSEQ--KRQPQ------EAQDSKIQDSSDIQNAA 289
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIP------------NPPFEIDLECIVDDFIFMCFF 342
+ + +Q L I LRE L+ EF P + E DLE ++DDF+F+CFF
Sbjct: 290 AIGARNSFQLLSIDILRECLEAEFMEPLEIGFEMESSSRHQRLEFDLERVIDDFVFLCFF 349
Query: 343 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 402
VGNDFLPH+P+L+IREGAI+ L+ +YKK G D + RV F+ + + ED
Sbjct: 350 VGNDFLPHLPSLDIREGAIDYLIELYKKLVPRFGYLSDDKGEIHFGRVRLFLNELATTED 409
Query: 403 RIFQKRA----RLHQRHAERI-----------------KREKAQARRGDDVEPLAQP-DS 440
IFQKR + ++ AER RE + R+ +D L + DS
Sbjct: 410 YIFQKRKLEEEKKQKQQAERATENKQSEVQNDRTKLSRTREDYENRKAEDDANLKETRDS 469
Query: 441 L-VPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP--HKVPRLSSGATIGAAIV 497
L V+ RL + S ++ + + + TS + + V +
Sbjct: 470 LNFAVAESLKKRLKTQDSSEQASSNKQMDVANMEQSTSEQIVLNDVDVEEEEEEEEEELS 529
Query: 498 EAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN- 556
+ E E Q+ KE+F+ +LKE L K + ED V+LGE GWKERYYE+KF+
Sbjct: 530 QVEYMLELSDQQVKEQFEKELKERLYKKRVV----DSVEDVVRLGEQGWKERYYEKKFHW 585
Query: 557 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 607
+ E + R+++ +Y EGL WVM YYY G SW W++PYHYAPFASDL
Sbjct: 586 SPQSETSQRKREELAYKYFEGLLWVMRYYYRGCVSWTWYFPYHYAPFASDL 636
>gi|74227371|dbj|BAE21766.1| unnamed protein product [Mus musculus]
Length = 417
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/408 (58%), Positives = 302/408 (74%), Gaps = 1/408 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 407
>gi|355729473|gb|AES09879.1| 5'-3' exoribonuclease 2 [Mustela putorius furo]
Length = 412
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/408 (58%), Positives = 302/408 (74%), Gaps = 1/408 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 407
>gi|349604825|gb|AEQ00267.1| 5'-3' exoribonuclease 2-like protein, partial [Equus caballus]
Length = 417
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/408 (58%), Positives = 301/408 (73%), Gaps = 1/408 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 407
>gi|83759101|gb|AAI10279.1| XRN2 protein [Bos taurus]
Length = 422
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/423 (56%), Positives = 306/423 (72%), Gaps = 1/423 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DN+YLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNMYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++ E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAEIEKQRVREEILAKGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR R K
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQK 419
Query: 421 REK 423
++K
Sbjct: 420 KKK 422
>gi|28503006|gb|AAH47182.1| 5'-3' exoribonuclease 2 [Danio rerio]
gi|182889854|gb|AAI65726.1| Xrn2 protein [Danio rerio]
Length = 540
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/408 (58%), Positives = 297/408 (72%), Gaps = 1/408 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +EE+ +GVKIPVDTSKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCLEEKAKEYNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ + A E++++R+E G LPP+ + FDSN ITPGTEFM L+ L+YY+
Sbjct: 121 ASKEGVELAEEKQKMREEVIERGGYLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYVAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RL NDPGW I V LSDA+VPGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLTNDPGWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +C+G + K GE DE D + V ++
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPRPCALCSQMGHEIKDCQGLPREKQGEHDEFADTIPVSEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLAVLREYLERELTMASLPFPFSFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
I+ L+ +YK GGYLT+ +L RVE +QAVG ED IF+KR
Sbjct: 360 IDRLVGIYKDVVHKTGGYLTENGFVNLERVELIMQAVGVAEDNIFKKR 407
>gi|84996629|ref|XP_953036.1| exoribonuclease (XRN family member) [Theileria annulata strain
Ankara]
gi|65304032|emb|CAI76411.1| exoribonuclease (XRN family member), putative [Theileria annulata]
Length = 937
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 306/777 (39%), Positives = 413/777 (53%), Gaps = 132/777 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVI----EEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVP FYRWL +YP V DVI E + D I ++ K NPNG E+DNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDVIDNYNERNLDLSDEDAIGLELLKDNPNG-EFDNLYLDMN 59
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI-----------DGV 105
GIIHPC HPE+ P T + +F C+ DY+DR+F MVRPRKL+Y+AI DGV
Sbjct: 60 GIIHPCCHPENMEQPQTEELMFNCILDYLDRIFFMVRPRKLIYLAIGNVNHDIIIFIDGV 119
Query: 106 APRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTE 165
APRAK+NQQRSRRF+++ A + L +++E+ K +DSNVITPGTE
Sbjct: 120 APRAKINQQRSRRFKSAALADLEDETYDTLIKDYEKRYGKTNLIVRKSKWDSNVITPGTE 179
Query: 166 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 225
FM LS L YI R+ W+ I VI SD+NVPGEGEHKIM ++R QR+ P YDPNT
Sbjct: 180 FMYKLSEKLIEYIEDRIEKYDAWKIIVVIFSDSNVPGEGEHKIMKFIRNQRHCPDYDPNT 239
Query: 226 RHCLYGLDADLIMLALATHEVHFSILREVVF---TPGQQDKCFLCGQPGHLAANCEGKAK 282
RH L+G+DADLIML LATHE +F ILRE+V P + + + +
Sbjct: 240 RHVLHGMDADLIMLGLATHEPNFFILREIVTFFSNPTTNNSEKAIANTIDTVSKTQNTTQ 299
Query: 283 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE----IDLECIVDDFIF 338
+G+ ++ + KP QFL + LREYL ++ R P FE +D E +DD +
Sbjct: 300 -SSGDVEKYMKMMRENWKPLQFLQLPVLREYLSHQLRFP-LGFENGEMVDFERCIDDLVL 357
Query: 339 MCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG 398
M FF GNDFLP++P++ I G+I+ ++ +Y+K L YL+D + + + F + +
Sbjct: 358 MIFFCGNDFLPNLPSISITGGSIDQMLLLYQKILPTLEDYLSDEGRLNFHTITQFFELLS 417
Query: 399 SYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP 458
ED F+ H +I K+Q RR +D
Sbjct: 418 KIEDETFK------NIHEFKI---KSQNRRQND--------------------------- 441
Query: 459 SPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKL 518
+ ++ N G + EA +S + + +++F +L
Sbjct: 442 ------DSNSKVTNDSGGNS-------------------EANSSDKGGEERIEDKFMKEL 476
Query: 519 KELLRDKSDAFNSDNPEED-----KVKLGEPG-WKERYYEEKFNA--KTPEEREETRKDV 570
KE + NS N ++D V L +P WKE YY EKFN KTPEE E+ + +
Sbjct: 477 KEKM-------NSSNVKDDVKLPVDVTLNDPKLWKEAYYREKFNLGDKTPEEIEKFVQKL 529
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL----------------KDLDQFN 614
Y +G+CWV+ YYY+G SW W+Y YHY+PF SDL KD D+ N
Sbjct: 530 SFDYIKGICWVLQYYYQGCPSWSWYYRYHYSPFCSDLNFSGIQSPEDYSCESVKD-DESN 588
Query: 615 --------------ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
I F+L P PF QL+GV P SSH +PE R LMTD +SP+ +FY
Sbjct: 589 LKRRHNTLETGVKMIKFDLDVPLTPFQQLMGVMPIRSSHCIPEKLRTLMTDVDSPLREFY 648
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
PT F D NGKRY +Q +A LPFIDE +LL VK IE L+EEE RN +++ +
Sbjct: 649 PTKFREDPNGKRYKYQWVALLPFIDEKKLLKHVKPIEDELSEEEKVRNRTSNNLIKI 705
>gi|426199678|gb|EKV49603.1| hypothetical protein AGABI2DRAFT_184268 [Agaricus bisporus var.
bisporus H97]
Length = 1454
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 319/839 (38%), Positives = 426/839 (50%), Gaps = 162/839 (19%)
Query: 12 EKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAP 71
E+YPL + +I+E KIP E+DNLYLD NGIIH C HP D A
Sbjct: 17 ERYPLT-SQLIQEN-------KIP-----------EFDNLYLDFNGIIHNCSHPNDEDAH 57
Query: 72 TTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSA 129
D++F +F Y+D LF ++P+KL +MA+DGVAPRAKMNQQRSRRFR +K+A D
Sbjct: 58 FRLSEDQIFTSIFAYVDHLFGKIKPKKLFFMAVDGVAPRAKMNQQRSRRFRTAKEAKD-- 115
Query: 130 AEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWE 189
+R++ E++G KLP D + FDSN ITPGT FMA LS L+Y+++ +++ D W
Sbjct: 116 -----VREKAEKKGEKLP---DEKAFDSNCITPGTLFMARLSEQLRYFVNKKISEDANWR 167
Query: 190 KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFS 249
I+V+LS VPGEGEHKIM Y+RL R P Y+PN RHCLYGLDADLIML L +H+ HF
Sbjct: 168 DIEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNPNIRHCLYGLDADLIMLGLLSHDPHFC 227
Query: 250 ILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWT 309
+LRE EV + + LH+
Sbjct: 228 LLRE----------------------------------------EVNLESVNFYLLHLCL 247
Query: 310 LREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367
+REYLD EFR PF LE ++DDFI + FVGNDFLP++P L I E + L V
Sbjct: 248 MREYLDLEFRDIESTLPFGYSLERVIDDFILLAVFVGNDFLPNLPDLHIHENGLEKLFEV 307
Query: 368 YKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ--------------------- 406
YKK L GY+ +G +++R++ + + +E +F+
Sbjct: 308 YKKVLPGLEGYINEGGVINVKRLQVILDEMARWEQDVFEKEYADLNWFKGKQAKHVKEME 367
Query: 407 ---KRARLHQRHAER-----IKREKAQARRGDDVEPLAQPDSLVPVSRFHGS------RL 452
KR+ L +R +K +R+G PL++ L ++ F S RL
Sbjct: 368 MGRKRSSLALTKPQRDIFAKVKGYILASRKG----PLSKAGKLTMLNTFPASERAFVTRL 423
Query: 453 A--------------------SGPSPSPYQQSECVGRLDN-----GKGTSGRPHKVPRLS 487
A + P + E G N GTS +V S
Sbjct: 424 AEELHLSLRFDEFDENDNNILTLTLPGVQEDDEDGGVSKNEEEKEANGTSSSDAEVVEES 483
Query: 488 SGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR--DKSDAFNS------DNPEEDKV 539
SG G + E++ D + EE + + +L DK+ AF+ D E +
Sbjct: 484 SG---GPPDSDWEDTSGDDDDADNEESRIAVDRVLNKYDKAPAFDDEEGGGFDARHERSI 540
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+ WK YY+ K + + D+V RY EGL WVMHYYY GV SW WFY YH
Sbjct: 541 REKMDEWKRGYYQGKMEISYDDPK--GMGDLVYRYVEGLQWVMHYYYSGVASWGWFYNYH 598
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
YAP SDL+ +D+ +FELG PFKPF QL+GV PSAS +PE YR+LM DPNSPI DF
Sbjct: 599 YAPRISDLRGVDKMTFNFELGTPFKPFQQLMGVLPSASMELIPEPYRELMYDPNSPILDF 658
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
YP +FE D+NGK+ W+ I K+PFIDE RLL + EH LT EE +RNS F+
Sbjct: 659 YPVEFESDLNGKKAEWEAIVKIPFIDEVRLLKAMATREHRLTTEERKRNSWGTSTKFIY- 717
Query: 720 SHPLSASIY---------TLDE-HCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDP 768
+P +++Y TL HC+ L P L DG++ I AG P
Sbjct: 718 -NPGESTVYPSSLPGFFPTLQRCHCRMEDFDLPTLDGLHLVPGLLDGVSLGIESLAGFP 775
>gi|147899710|ref|NP_001091411.1| 5'-3' exoribonuclease 2 [Xenopus laevis]
gi|126631948|gb|AAI33744.1| LOC100049102 protein [Xenopus laevis]
Length = 457
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/408 (58%), Positives = 297/408 (72%), Gaps = 1/408 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ +E++P + +KIPVDT+KPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEQKPKECNNIKIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ +S E+ R+R+E +G LP + + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGVESVEEKNRIREEVLSKGGYLPKEEMKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+VPGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P Q C LCGQ GH C+G + K GE DE ++
Sbjct: 241 LATHEPYFTIIRE-EFKPNQPRPCGLCGQFGHEIKECQGMPREKKGEHDEFAGAPPGCEQ 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PFE D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFIRLNILREYLEKELTMASLPFEFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
I+ L+ +YK GGYLT+ +L RV+ + AVG ED IF+KR
Sbjct: 360 IDRLVNIYKNVVHKTGGYLTESGFVNLERVQMIMLAVGEVEDNIFKKR 407
>gi|71028722|ref|XP_764004.1| exoribonuclease [Theileria parva strain Muguga]
gi|68350958|gb|EAN31721.1| exoribonuclease, putative [Theileria parva]
Length = 958
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 306/783 (39%), Positives = 416/783 (53%), Gaps = 143/783 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEE----EPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVP FYRWL +YP V DVI+ + D I ++ K NPNG E+DNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDVIDNYNDRNLDLSDPDAIGLELLKDNPNG-EFDNLYLDMN 59
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI-----------DGV 105
GIIHPC HPE+ P + + +F C+ DY+DR+F MVRPRKL+Y+AI DGV
Sbjct: 60 GIIHPCCHPENMEQPQSEEVMFTCILDYLDRIFFMVRPRKLIYLAIGNIKNYIMICIDGV 119
Query: 106 APRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTE 165
APRAK+NQQRSRRF+++ A + L +++E+ K +DSNVITPGTE
Sbjct: 120 APRAKINQQRSRRFKSAALADLEDETYDTLIRDYEKRYGKTDLIVRKSKWDSNVITPGTE 179
Query: 166 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 225
FM LS L YI R W++I VI SD+NVPGEGEHKIM ++R QR+ P YDPNT
Sbjct: 180 FMYKLSEKLMEYIEDRAERYDAWKRIVVIFSDSNVPGEGEHKIMKFIRNQRHCPDYDPNT 239
Query: 226 RHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQ----------DKCFLCGQPGHLAA 275
RH L+G+DADLIML LATHE +F ILRE+V + + +P
Sbjct: 240 RHVLHGMDADLIMLGLATHEPNFFILREIVTFFTNPTTNNTENAIANTLNIVSKPFKNTE 299
Query: 276 NCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE----IDLEC 331
+ EG K + KP QFL + LREYL ++ R P FE +D E
Sbjct: 300 SAEGVQKYLKMMREN--------WKPLQFLQLPVLREYLSHQLRFP-LGFENGEMVDFER 350
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 391
VDD + M FF GNDFLP++P++ I G+I+ ++ +Y+K AL YL+D K + +
Sbjct: 351 CVDDLVLMIFFCGNDFLPNLPSISITGGSIDQMLLLYQKVLPALNDYLSDEGKLNFHAIT 410
Query: 392 HFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR 451
F + + ED F+ +H+ + KAQ+R+ ++
Sbjct: 411 SFFELLSKIEDETFKN---IHEF------KMKAQSRKQNN-------------------- 441
Query: 452 LASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK 511
L++ T+ S+G + G S +++ + +
Sbjct: 442 -----------------ELNSADATND--------SNGHSEGTG------SDKSEEERIE 470
Query: 512 EEFKAKLKELLRDKSDAFNSDNPEED-----KVKLGEPG-WKERYYEEKFNA--KTPEER 563
+ FK +LKE + NS N ++D V L +P WKE YY EKFN K EE
Sbjct: 471 DRFKKELKERI-------NSCNVKDDVKLPVDVTLNDPKLWKEAYYREKFNLGDKNQEEI 523
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD-----LKDLDQFN---- 614
++ + + Y +G+CWV+ YYY+G SW W+Y YHY+PF SD L+ L+ +
Sbjct: 524 DKFVQKLSFDYIKGICWVLQYYYQGCPSWSWYYRYHYSPFCSDLHFSGLQSLEDYKSESQ 583
Query: 615 --------------------ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
I F+LG P PF QL+GV P SSH LPE R LMTDP+S
Sbjct: 584 SEGEANLKRRHDSLEMGVKMIKFDLGVPLTPFQQLMGVMPIRSSHCLPEKLRTLMTDPDS 643
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
P+ +FYPT F D NGKRY +Q +A LPFIDE +LL VK IE L+EEE RN ++
Sbjct: 644 PLREFYPTKFREDPNGKRYKYQWVALLPFIDEKKLLTHVKPIEDELSEEEKIRNRTSNNL 703
Query: 715 LFV 717
+ +
Sbjct: 704 IIL 706
>gi|326498799|dbj|BAK02385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 895
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 281/736 (38%), Positives = 395/736 (53%), Gaps = 120/736 (16%)
Query: 9 WLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNG---------LEYDNLYLDMNGII 59
WL KYP +++ VI+ P + + + + YDNLYLDMN II
Sbjct: 18 WLVGKYPNILSPVIDAFPPSLSEEDDEEEEEEEAEGEEEEEEEEEDIIYDNLYLDMNEII 77
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
H CF ++ +V+ FD++DRLF +V+PR+LLY+A+DGVAP AK N+ R F
Sbjct: 78 HKCFGRKN-------GQVYLRFFDHMDRLFRLVKPRRLLYLAVDGVAPMAKTNKLRQGYF 130
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++K D+ AE L + F +G+++ P+ + D V PGTEFM +S+ L+++I
Sbjct: 131 KSTKQGTDAEAEAVLLTEIFRVQGKEVLPRDTYEFEDRTVKMPGTEFMETISVVLEWFIR 190
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN DP W+ IKVILSDANVPGEGEHKIMS++R QR+ YDPNTRHCLYG DADLIML
Sbjct: 191 ERLNTDPEWKDIKVILSDANVPGEGEHKIMSFIRAQRSRENYDPNTRHCLYGHDADLIML 250
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
ALA+HEVH SILREV N G+ +P
Sbjct: 251 ALASHEVHISILREV---------------------NPNGR----------------IPA 273
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ YQF++IW LREYL+ E + P + D E ++DDFI +C +GNDF+P +P+LEI E
Sbjct: 274 RLYQFVNIWVLREYLELEMKTPG--CKQDTERLIDDFICICCLMGNDFIPRIPSLEIHEF 331
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPS--------LRRVEHFIQAVGSYEDRIFQKRARL 411
A++LL+ YK F +GGY+ + +K + R+E F + E++I KR L
Sbjct: 332 AVDLLIETYKTAFNRMGGYIVNTNKIKDKHGVYLEVSRLEKFFHELSLCEEKILLKRYEL 391
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
++ +I+RE A D GS L S + S C
Sbjct: 392 QEKLLCKIQREAAGNEESSD-----------------GSDLISKSFVTQRSTSTC----- 429
Query: 472 NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNS 531
+S E + ++N E + ++ K D F +
Sbjct: 430 -----------------------------SSNEYNVRKNTRELWRAVNDICCSKDDLFKN 460
Query: 532 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 591
++D + PGWK R+Y EKF A+T E + ++V +Y EGLCW++ Y+ V S
Sbjct: 461 RACKQDHIG---PGWKFRFYREKFGAQTSNEVGRLQTEMVQKYLEGLCWMLQCYFSEVPS 517
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP---SASSHALPEHYRKL 648
W W YP++YAPFASD L QFNISF + P +PF+QL+ V P S ALP+ Y L
Sbjct: 518 WTWCYPFYYAPFASDFNCLPQFNISFTMDKPLRPFDQLMAVLPPEVHVLSSALPKCYSTL 577
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+ S I FYP++FE+D GKR+ QG+AKLPFID LL K +E LT +E RRN
Sbjct: 578 IGCEESTIQMFYPSEFEIDTYGKRFLSQGVAKLPFIDNKLLLSATKMVEKDLTYDEMRRN 637
Query: 709 SIMADMLFVLLSHPLS 724
++ + +F+ SH L+
Sbjct: 638 NVRQERIFLRNSHSLT 653
>gi|407036110|gb|EKE38009.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 779
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 282/711 (39%), Positives = 415/711 (58%), Gaps = 88/711 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+ WL +KY + D + + D D S PNPNG+EYDN Y+D+NG+IH
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKGSSIEND------DLSSPNPNGVEYDNFYIDLNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HP DR P T +VF + YID + +VRPRKLLY+AIDGVAPRAKMNQQRSRRF+
Sbjct: 55 PCYHPTDRQTPETNVDVFVLLTQYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++ + + EE++ + DSN ITPGTEFM +S ++ YI
Sbjct: 115 TAQSMVNQSFEEKK-------------SVFKEKPIDSNCITPGTEFMEAVSKVIKAYIKE 161
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N+ W I VI SD++VPGEGEHKI+ ++R Q++ Y+P RHC+YGLDADLIMLA
Sbjct: 162 RMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDADLIMLA 221
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +FSI+R+ + G DKC++CG+ H + +C K + D K
Sbjct: 222 LATHERYFSIIRDKPYNKG--DKCYICGE-YHSSDSC--KNYNRVAPLDP-------ITK 269
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
P+ F+ LR+YL+ R+ + D E +DDFIF CF VGNDFLPH+P+L+I+EGA
Sbjct: 270 PFIFVDCHVLRQYLNNTIRVE----KYDFERCLDDFIFFCFLVGNDFLPHIPSLDIQEGA 325
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I++L+ +Y K F GY+T+ + + V+ F+ VG E ++ R R++
Sbjct: 326 IDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNR---------RLR 375
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+EK D + + + D + QS R
Sbjct: 376 KEKEDQLYFD--KKMRELDYQI--------------------QS----------AFENRT 403
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+P+ + + +I E E + E + Q +E + K +E++R + + D+++
Sbjct: 404 EALPQRKTEIKV-KSIKEVELAKE-ESQLIRESLEKKKQEVVRQMEEL------KHDEIQ 455
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
LGE G++ERYY++KF+ +E+ ++V Y EGL WV YYYEG SW W+YPY+Y
Sbjct: 456 LGEQGYEERYYQQKFHVDYKKEK-NIIIEIVDSYVEGLNWVFSYYYEGCQSWDWYYPYYY 514
Query: 601 APFASDL-KDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
APFA D+ K LD +F + + G PF+PF QL+ V P S H LP+ +++LM +SP+S+
Sbjct: 515 APFAKDIGKLLDPEFEVQYTQGKPFRPFEQLMSVLPPQSKHCLPKEFQQLMNSTSSPLSN 574
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
FYP DF++DMNG+R ++ IA + FI++ LL+ V+ IE L +++ +RNS
Sbjct: 575 FYPEDFKIDMNGERSFYKAIALIGFINQKELLNVVEPIEKELGKKDQQRNS 625
>gi|169776419|ref|XP_001822676.1| exonuclease Kem1 [Aspergillus oryzae RIB40]
gi|83771411|dbj|BAE61543.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1409
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 292/758 (38%), Positives = 409/758 (53%), Gaps = 121/758 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAISQGIEM------PKEDA--FDSNCITPGTEFMAKLTEQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 INKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q ++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF R F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCMVREYLELEFQELERTDVLSFSFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-----KR 408
L I EGA+ L VYK+ +GGY+ + ++ R+ + + E R F+ +R
Sbjct: 302 LHINEGALAFLFKVYKEILPKMGGYINEQGVINMERLGMLLDGLSDVEFRFFEAEYSGER 361
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 468
+++ E + + + P AQ + L V ++ +R P P
Sbjct: 362 WIQAKKNGGENNSESQERPKSFTITP-AQKNLLKEVKKYVLNRPEKAADPQP-------- 412
Query: 469 RLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFETDPQENKEEF------------- 514
LD R K + +L+ + + T+P E+ E F
Sbjct: 413 -LDFPPTLPARDRKFLEQLADDLRL---------PWTTEPDEHGERFIRFKLPAKQNDDS 462
Query: 515 --------KAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKT 559
++ ++R +A + ED K E WK +YY KF
Sbjct: 463 DDEEDEEASMAVQRIIRKYENAKVQELSAEDAQKAAEKKYEEKFQEWKSKYYTGKFEWGL 522
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ EE RK + Y +GL WV++YYY G+ SW WF+ YHYAP SD+K + + +F+L
Sbjct: 523 -DNHEEMRK-LTENYVQGLQWVLYYYYRGIASWPWFFQYHYAPMISDVKKGLKADTNFQL 580
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G PF+P++QL+GV P S +P YR LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 581 GQPFRPYDQLMGVLPDRSKKIVPAAYRDLMTSPESPIVDFYPRDFELDMNGKKMEWEAVV 640
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
K+PFI+E RLLD +K EH LT EE RN A + F
Sbjct: 641 KIPFIEEKRLLDALKTKEHLLTPEEKARNGFGASLKFT 678
>gi|238503103|ref|XP_002382785.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|220691595|gb|EED47943.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|391870653|gb|EIT79830.1| 5'-3' exonuclease XRN1/KEM1/SEP1 involved in DNA strand exchange
and mRNA turnover [Aspergillus oryzae 3.042]
Length = 1409
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 292/758 (38%), Positives = 409/758 (53%), Gaps = 121/758 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAISQGIEM------PKEDA--FDSNCITPGTEFMAKLTEQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 INKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q ++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF R F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCMVREYLELEFQELERTDVLSFSFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-----KR 408
L I EGA+ L VYK+ +GGY+ + ++ R+ + + E R F+ +R
Sbjct: 302 LHINEGALAFLFKVYKEILPKMGGYINEQGVINMERLGMLLDGLSDVEFRFFEAEYSGER 361
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 468
+++ E + + + P AQ + L V ++ +R P P
Sbjct: 362 WIQAKKNGGENNSESQERPKSFTITP-AQKNLLKEVKKYVLNRPEKAADPQP-------- 412
Query: 469 RLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFETDPQENKEEF------------- 514
LD R K + +L+ + + T+P E+ E F
Sbjct: 413 -LDFPPTLPARDRKFLEQLADDLRL---------PWTTEPDEHGERFIRFKLPAKQNDDS 462
Query: 515 --------KAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKT 559
++ ++R +A + ED K E WK +YY KF
Sbjct: 463 DDEEDEEASMAVQRIIRKYENAKVQELSAEDAQKAAEKKYEEKFQEWKSKYYTGKFEWGL 522
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ EE RK + Y +GL WV++YYY G+ SW WF+ YHYAP SD+K + + +F+L
Sbjct: 523 -DNHEEMRK-LTENYVQGLQWVLYYYYRGIASWPWFFQYHYAPMISDVKKGLKADTNFQL 580
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G PF+P++QL+GV P S +P YR LMT P SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 581 GQPFRPYDQLMGVLPDRSKKIVPAAYRDLMTSPESPIVDFYPRDFELDMNGKKMEWEAVV 640
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
K+PFI+E RLLD +K EH LT EE RN A + F
Sbjct: 641 KIPFIEEKRLLDALKTKEHLLTPEEKARNGFGASLKFT 678
>gi|67466694|ref|XP_649490.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465942|gb|EAL44104.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 779
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 280/711 (39%), Positives = 415/711 (58%), Gaps = 88/711 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+ WL +KY + D + + D D PNPNG+EYDN Y+D+NG+IH
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKNSSIEND------DLLSPNPNGVEYDNFYIDLNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HP DR P T +VF + YID + +VRPRKLLY+AIDGVAPRAKMNQQRSRRF+
Sbjct: 55 PCYHPTDRQTPETNVDVFVLLTRYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+++ + + EE++ + DSN ITPGTEFM +S ++ YI
Sbjct: 115 TAQNMVNQSFEEKK-------------SVFKEKPIDSNCITPGTEFMEAVSKVIKAYIKE 161
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N+ W I VI SD++VPGEGEHKI+ ++R Q++ Y+P RHC+YGLDADLIMLA
Sbjct: 162 RMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDADLIMLA 221
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +FSI+R+ + G DKC++CG+ H + +C K + D K
Sbjct: 222 LATHERYFSIIRDKPYNKG--DKCYICGE-YHSSDSC--KNYNRVAPLDP-------ITK 269
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
P+ F+ LR+YL+ ++ + D E +DDFIF CF VGNDFLPH+P+L+I+EGA
Sbjct: 270 PFIFVDCHVLRQYLNNTIKVE----KYDFERCLDDFIFFCFLVGNDFLPHIPSLDIQEGA 325
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I++L+ +Y K F GY+T+ + + V+ F+ VG E ++ R R++
Sbjct: 326 IDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNR---------RLR 375
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+EK D + + + D + QS R
Sbjct: 376 KEKEDQLYFD--KKMRELDYQI--------------------QS----------AFENRT 403
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+P+ + + +I E E + E + Q +E + K +E++R + + D+++
Sbjct: 404 EALPQRKTEIKV-KSIKEVELAKE-ESQLIRESLEKKKQEVVRQMEEL------KHDEIQ 455
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
LGE G++ERYY++KF+ +E+ ++V Y EGL WV YYYEG SW W+YPY+Y
Sbjct: 456 LGEQGYEERYYQQKFHVDYKKEKNNII-EIVDSYVEGLNWVFSYYYEGCQSWDWYYPYYY 514
Query: 601 APFASDL-KDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
APFA D+ K LD +F + + G PF+PF QL+ V P S H LP+ +++LM +SP+S
Sbjct: 515 APFAKDIGKLLDPEFEVQYTQGKPFRPFEQLMSVLPPQSKHCLPKEFQQLMNSTSSPLSS 574
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
FYP DF++DMNG+R ++ IA + FI++ +LL+ V+ IE L +++ +RNS
Sbjct: 575 FYPEDFKIDMNGERSFYKAIALIGFINQKKLLNVVEPIEKELGKKDQQRNS 625
>gi|449708316|gb|EMD47799.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 779
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 280/720 (38%), Positives = 416/720 (57%), Gaps = 88/720 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+ WL +KY + D + + D D PNPNG+EYDN Y+D+NG+IH
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKNSSIEND------DLLSPNPNGVEYDNFYIDLNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HP DR P T +VF + YID + +VRPRKLLY+AIDGVAPRAKMNQQRSRRF+
Sbjct: 55 PCYHPTDRQTPETNVDVFVLLTRYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+++ + + EE++ + DSN ITPGTEFM +S ++ YI
Sbjct: 115 TAQNMVNQSFEEKK-------------SVFKEKPIDSNCITPGTEFMEAVSKVIKAYIKE 161
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N+ W I VI SD++VPGEGEHKI+ ++R Q++ Y+P RHC+YGLDADLIMLA
Sbjct: 162 RMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDADLIMLA 221
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +FSI+R+ + G DKC++CG+ H + +C K + D K
Sbjct: 222 LATHERYFSIIRDKPYNKG--DKCYICGE-YHSSDSC--KNYNRVAPLDP-------ITK 269
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
P+ F+ LR+YL+ ++ + D E +DDFIF CF VGNDFLPH+P+L+I+EGA
Sbjct: 270 PFIFVDCHVLRQYLNNTIKVE----KYDFERCLDDFIFFCFLVGNDFLPHIPSLDIQEGA 325
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I++L+ +Y K F GY+T+ + + V+ F+ VG E ++ R R++
Sbjct: 326 IDILIKIYLK-FLPENGYITENGTINFKIVKRFLHLVGKEEKQLLVNR---------RLR 375
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+EK D + + + D + QS R
Sbjct: 376 KEKEDQLYFD--KKMRELDYQI--------------------QS----------AFENRT 403
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+P+ + + +I E E + E + Q +E + K +E++R + + D+++
Sbjct: 404 EALPQRKTEIKV-KSIKEVELAKE-ESQLIRESLEKKKQEVVRQMEEL------KHDEIQ 455
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
LGE G++ERYY++KF+ +E+ ++V Y EGL WV YYYEG SW W+YPY+Y
Sbjct: 456 LGEQGYEERYYQQKFHVDYKKEKNNII-EIVDSYVEGLNWVFSYYYEGCQSWDWYYPYYY 514
Query: 601 APFASDL-KDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
APFA D+ K LD +F + G PF+PF QL+ V P S H LP+ +++LM +SP+S
Sbjct: 515 APFAKDIGKLLDPEFEVQHTQGKPFRPFEQLMSVLPPQSKHCLPKEFQQLMNSTSSPLSS 574
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF++DMNG+R ++ IA + FI++ +LL+ V+ IE L +++ +RNS + +
Sbjct: 575 FYPEDFKIDMNGERSFYKAIALIGFINQKKLLNVVEPIEKELGKKDQQRNSRYGNTFIFI 634
>gi|270010451|gb|EFA06899.1| hypothetical protein TcasGA2_TC009846 [Tribolium castaneum]
Length = 975
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/431 (55%), Positives = 307/431 (71%), Gaps = 10/431 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ IE++ V ++GV++P ++++PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVHCIEQKAVDVNGVRVPTNSAEPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP DE+ +F+ IDR+F +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPRNEDEMMVAIFECIDRIFNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLP-PKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A+K+ + E +R+R E G KLP K + FDSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKETVEKINEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMARLSNCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW+ IKVILSDANVPGEGEHKIM ++R QR P +DPNT+HCL G DADLIML
Sbjct: 181 ERLNNDPGWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH +C G A E + V +
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPRPCDICGQLGHEMKDCIGGAASA-----ESDTQKVFAE 294
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ + L+EYL+ E ++PN PF+ + E ++DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 295 TDYIFVRLNVLKEYLERELQMPNLPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YK GG+LT+ +L RV+ + +G ED IF+ R Q+ +
Sbjct: 355 AIDRLIRLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTR---QQKELQFK 411
Query: 420 KREKAQARRGD 430
REKA+ RR +
Sbjct: 412 AREKAKRRRSE 422
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 153/256 (59%), Gaps = 17/256 (6%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D+V+L E G+K+RYYE KF+ + + + R +V L Y GLCWV+ YYY+G SW+W+Y
Sbjct: 496 DEVRLWEDGFKDRYYESKFDVNS--DNLDFRNNVALHYVRGLCWVLRYYYQGCASWKWYY 553
Query: 597 PYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
PYHYAPFASD + + FE PF+P QL+GVFP+ASS +P+ + KLM+DP SP
Sbjct: 554 PYHYAPFASDFVHIAGLSTEFEEDSDPFRPLEQLMGVFPAASSKHVPQPWAKLMSDPESP 613
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DF++D+NGK+++WQG+A LPF++E RL + L+ EE RRN D L
Sbjct: 614 IIDFYPEDFKIDLNGKKFAWQGVALLPFVNEDRLFKALAPYYKELSPEEIRRNVRGDDRL 673
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPPV 772
+V + I L + +++ +K V V +GM G + C +
Sbjct: 674 YVGAKNAGYNQIKQL--YVQKISVKMEVHVS-------IEGMQGTVLLSDECVD--YGGY 722
Query: 773 FRSPVASMEDIMGNQV 788
SP+ ++DIM N V
Sbjct: 723 LDSPIRGLDDIMNNMV 738
>gi|167539832|ref|XP_001741374.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165894075|gb|EDR22159.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 779
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 284/712 (39%), Positives = 410/712 (57%), Gaps = 90/712 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+ WL +KY + D + D D S PNPNG+EYDN Y+D+NG+IH
Sbjct: 1 MGVPSFFAWLTKKYFGITNDCKRGSSIEND------DLSSPNPNGVEYDNFYIDLNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HP DR P T +VF + YID + +VRPRKLLY+AIDGVAPRAKMNQQRSRRF+
Sbjct: 55 PCYHPTDRQTPETNVDVFVLLTQYIDYMIDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ + + + EE++ + DSN ITPGTEFM +S ++ YI
Sbjct: 115 TAYNMENQSFEEKK-------------SIFKEKPVDSNCITPGTEFMEAVSKVIKAYIKE 161
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N+ W I VI SD++VPGEGEHKI+ ++R Q++ Y+P RHC+YGLDADLIMLA
Sbjct: 162 RMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDADLIMLA 221
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +FSI+R+ + G DKC++CG H +C K + D K
Sbjct: 222 LATHERYFSIIRDKPYNKG--DKCYICGD-YHSPDHC--KNYNRIAPLDP-------ITK 269
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
P+ F+ LR+YL+ ++ + D E +DDFIF CF VGNDFLP +P+L+I+EGA
Sbjct: 270 PFIFVDCHVLRQYLNKTIKVE----KYDFERCLDDFIFFCFLVGNDFLPRIPSLDIQEGA 325
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I++L+ +Y K F GY+T+ +++ V+ F+ VG E ++ R RL + ++I
Sbjct: 326 IDILIKIYLK-FLPENGYITENGTINIKIVKKFLHLVGKEEKQLLVNR-RLRKEKEDQIY 383
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ-QSECVGRLDNGKGTSGR 479
+K + R D YQ QS R T
Sbjct: 384 FDK-RMRELD------------------------------YQIQSAFENR------TEAL 406
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
P + + + + + E+ Q KE + K +EL + N D++
Sbjct: 407 PQRKTEIKVKSIKEVQLAKEES------QLIKESLEKKKQELFHQIEELKN------DEI 454
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
+LGEPG++ERYY++KF+ + +E+ +++ Y EGL WV YYYEG SW W+YPY+
Sbjct: 455 QLGEPGYEERYYQQKFHVEYKKEKSLVI-EIIESYVEGLNWVFSYYYEGCQSWDWYYPYY 513
Query: 600 YAPFASDL-KDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
YAPFA D+ K LD +F + + G PF+PF QLL V P S H LP+ +R+LM +SP+S
Sbjct: 514 YAPFAKDIGKLLDPEFEVQYTQGKPFRPFEQLLSVLPPQSKHCLPKEFRQLMNSTSSPLS 573
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
+FYP +F++DMNG+R ++ IA + FI++ +LL V+ IE L +++ +RNS
Sbjct: 574 NFYPEEFKIDMNGERSFYKAIALIGFINQKKLLSVVEPIEKDLGKKDQQRNS 625
>gi|154295528|ref|XP_001548199.1| hypothetical protein BC1G_13389 [Botryotinia fuckeliana B05.10]
Length = 854
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 281/718 (39%), Positives = 395/718 (55%), Gaps = 91/718 (12%)
Query: 81 MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFE 140
+F Y DR+ MVRPRKLL +AIDGVAPRAKMNQQRSRRFR++++A + A ++ L + +
Sbjct: 4 IFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRRFRSAQEAKEKAEDKAELLKMLK 63
Query: 141 REGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANV 200
+G + + +DSN ITPGT FM +L+++L+Y+I +LN DP W K+KVI+SD+ V
Sbjct: 64 SQGSHIEETEVKKAWDSNEITPGTPFMDILALSLRYWIAYKLNTDPAWAKMKVIISDSTV 123
Query: 201 PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPG 259
PGEGEHKIM +VR QR+ P ++PNTRH +YGLDADLIML LATHE HF ILRE V F G
Sbjct: 124 PGEGEHKIMEFVRSQRSSPDHNPNTRHVMYGLDADLIMLGLATHEPHFRILREDVFFNDG 183
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ C LCGQ GH A C+G K K GEFDEK + KP+ +LH+ LREYL E
Sbjct: 184 KPRTCKLCGQHGHEARECKGMYKIKDGEFDEKASAPTL--KPFIWLHVSVLREYLAAEI- 240
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
LEIRE IN L+A+++ +GGYL
Sbjct: 241 ----------------------------------LEIREDGINTLIAIWRDNIPYMGGYL 266
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ--RHAERIKREKAQARRGDDVEPLAQ 437
T L R + + + ED IF+KR + + + ++ E+ RG++ P
Sbjct: 267 TKDGHVDLERAQFILDGLAKQEDAIFRKRRKNEENFQKKRKLNNERNARGRGNNGGPQDS 326
Query: 438 PDSLVPVSRFHGSRLASGPSPSPY-------QQSECVGRLDNGKGTSGRPHKVPRLSSGA 490
P ++G + G +P+ E + G +K + A
Sbjct: 327 P--------YNGRQPPGGAAPTGLPLFTPGVANKEAKAMTHDMVMNRGAAYKASIANKSA 378
Query: 491 TIGAAIVEAENSFETD----PQENKEEFKAKLKELLRDKSDAFNSDNPEE---------- 536
AA+ E N D P+ + ++ L + K++ D+
Sbjct: 379 A--AALKEMMNGKSADDNGKPKADDTSAESPATALGKRKAELIEDDDSSTPGRNTPTSGT 436
Query: 537 -------------DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 583
D V+L E G+ +RYYE+KFN + P++ E R +V Y EGL WV+
Sbjct: 437 PGTPTTPGDDLPPDTVRLWEDGYADRYYEQKFN-RDPKDI-EFRHEVGRAYVEGLAWVLL 494
Query: 584 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 643
YY++G SW W+YPYHYAPFA+D +L I F+ G F+PF QL+GV P+AS A+PE
Sbjct: 495 YYFQGCPSWDWYYPYHYAPFAADFANLKDMKIDFQKGRIFRPFEQLMGVLPAASRQAIPE 554
Query: 644 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 703
+ LMT+ +S I DFYP DF VD+NGK+++WQG+A LPFID RLLD + K+ TL E+
Sbjct: 555 QFHHLMTNEDSEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLDAMAKVYPTLPED 614
Query: 704 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
+ RN + D+L V +H +Y DE + K++ +LNP++S+G+ G I
Sbjct: 615 VSARNGLGRDVLLVSEAH---HDLY--DEITSKFYSKKQDAPHMKLNPKVSEGLTGRI 667
>gi|361125661|gb|EHK97694.1| putative 5'-3' exoribonuclease 2 [Glarea lozoyensis 74030]
Length = 1008
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/427 (53%), Positives = 301/427 (70%), Gaps = 6/427 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP +V+ E+P IDGV+IPVDT PNPNG E+DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSQKYPKIVSG---EQPREIDGVQIPVDTRGPNPNGEEFDNLYLDMNGIVH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP P +E+ +F Y DR+ MVRPRKLL +AIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLLIAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++++A + A++ L + + +G + + + FDSN ITPGT FM +L+ +L+Y+I L
Sbjct: 118 SAQEAKEKEADKAELAKMLKSQGGRTEDAAVKKAFDSNEITPGTPFMDILASSLRYWIAL 177
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+LN DP W K+KVI+SD+ VPGEGEHKIM ++R QR+ P +DPNTRH +YGLDADLIML
Sbjct: 178 KLNTDPAWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPDHDPNTRHVIYGLDADLIMLG 237
Query: 241 LATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF +LRE VF + + C +CGQ GH A C G+AK K G+FDEK +
Sbjct: 238 LATHEPHFRVLREDVFAQDSKPRTCHMCGQAGHEARECTGQAKVKDGDFDEKDSAPAL-- 295
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL+ E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 296 KPFIWLHVSILREYLEAELYVPSQPFRFDLERALDDWVFMCFFVGNDFLPHLPSLEIREN 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
I+ L+A+++ +GGYLT L R + ++ + ED IF++R R
Sbjct: 356 GIDTLIAIWRDNIPFMGGYLTKDGHVDLERAQLILEGLAKQEDAIFRRRKETEDRREAGA 415
Query: 420 KREKAQA 426
KR K QA
Sbjct: 416 KRRKLQA 422
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 142/231 (61%), Gaps = 7/231 (3%)
Query: 531 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
+D P D V+L + G+ +RYY +KF+ + E R V Y EGL WV+ YY++G
Sbjct: 561 TDEPPVDNVRLWDEGYADRYYSQKFDVHPSDI--EFRHKVARAYVEGLAWVLLYYFQGCP 618
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SW W+YPYHYAPFA+D DL ISF G F+P+ QL+GV P+AS A+P + +LMT
Sbjct: 619 SWDWYYPYHYAPFAADFVDLKDMTISFNKGRIFRPYEQLMGVLPAASRQAIPPAFHELMT 678
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
+P+S I DFYP DF VD+NGK+++WQG+A LPFID RLL + K+ TL + A RN +
Sbjct: 679 NPDSEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLQAMAKVYPTLAPDVAARNVV 738
Query: 711 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
D L + +H +Y+ + K++ + +L+P S+G+ G +
Sbjct: 739 GKDALLIAEAH---EELYS--HVAAKFYSKKQGDSVVKLDPRASEGLTGIV 784
>gi|268533146|ref|XP_002631701.1| C. briggsae CBR-XRN-2 protein [Caenorhabditis briggsae]
Length = 901
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/434 (55%), Positives = 304/434 (70%), Gaps = 12/434 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL +KYP V + E+ +DG ++PVD ++PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDRQRGVDGRRVPVDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP DE+F +F+YIDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFMAVLSIALQYY 177
ASK+ A+ AA E R+ EG +P K + FDSN ITPGT FMA L+ AL+YY
Sbjct: 121 ASKEMAEKAASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRYY 180
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
IH R+ NDP W I++ILSDANVPGEGEHKIM Y+R QR P +DPNT HCL G DADLI
Sbjct: 181 IHDRVTNDPAWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLI 240
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML +ATHE +F+I+RE F P Q C LCGQ GH C G A + GDE
Sbjct: 241 MLGIATHEANFNIIRE-EFVPNQPRACELCGQYGHELKECRG-----AENDTDLGDEYCK 294
Query: 298 P---KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P +K + FL I LREYL+ E +PN PF+ +LE +DD++F+CFFVGNDFLPH+P+L
Sbjct: 295 PEQREKNFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVGNDFLPHLPSL 354
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
EIREGAI+ L+ +YK+ + GYLT P L RVE ++ +G ED IF++R + +R
Sbjct: 355 EIREGAIDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQDEER 414
Query: 415 HAERIKREKAQARR 428
E K +KA+ ++
Sbjct: 415 FKENQKNKKARMQQ 428
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 167/282 (59%), Gaps = 19/282 (6%)
Query: 508 QENKEEFKAKLKELLRDKSDA-----FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 562
+EN++ KA++++ R + + D +D ++L E GWKERYY KF+ + +
Sbjct: 416 KENQKNKKARMQQYGRKRKAEQPIIITDEDEEPKDDIRLYESGWKERYYRAKFDVGSDDV 475
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GH 621
+ R V Y EGLCWV+ YYY+G SW W++PYHYAPFASD + + +F F
Sbjct: 476 --DFRHRVAWAYVEGLCWVLRYYYQGCSSWDWYFPYHYAPFASDFETVGEFKPDFTRPTK 533
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
PF P QL+ VFP+AS LP ++KLMT+ SPI D YP DF +D+NGK+Y+WQG+A L
Sbjct: 534 PFNPLEQLMSVFPAASKQHLPVEWQKLMTEDESPIIDLYPADFRIDLNGKKYAWQGVALL 593
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKE 741
PF+DE RLL+ +K + TLT+EE RN+ + +F+ +H + + + K +
Sbjct: 594 PFVDEQRLLETLKSVYPTLTDEEKYRNTRGPNRIFIGRNH----KSFAFFQQVAESKSND 649
Query: 742 RVEVKERLNPELSDGMNGYIS--PCAGDPHPPVFRSPVASME 781
V+ L+P L +G++G IS A P P F SPV+ E
Sbjct: 650 LVD----LDPSLLNGVSGKISYDSTATAPGLP-FPSPVSHEE 686
>gi|169763218|ref|XP_001727509.1| 5'-3' exoribonuclease 2 [Aspergillus oryzae RIB40]
gi|238489103|ref|XP_002375789.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
gi|115311954|sp|Q2UCP5.3|XRN2_ASPOR RecName: Full=5'-3' exoribonuclease 2
gi|83770537|dbj|BAE60670.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698177|gb|EED54517.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
Length = 1035
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/429 (51%), Positives = 307/429 (71%), Gaps = 6/429 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE+P ++G +IPVDT++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F+Y DR+ MVRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGR---KLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
++++A ++ ++E R++F ++ + ++ + + +DSNVITPGT FM +L+ +L+Y+
Sbjct: 121 SAQEAKEADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFMDILAASLRYW 180
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGLDADLI
Sbjct: 181 IAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLI 240
Query: 238 MLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
ML LATHE HF +LRE V F + C LCGQ GH A C G+AK K G+FDEKG
Sbjct: 241 MLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFDEKGKGTS 300
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ KP+ +L++ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L+I
Sbjct: 301 L--KPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 358
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
RE I+ L+A+++ +GGYLT ++ + +Q + ED IF++R ++ ++
Sbjct: 359 RENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFRRRRQVEEKKL 418
Query: 417 ERIKREKAQ 425
KR K +
Sbjct: 419 ANEKRRKEE 427
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 144/225 (64%), Gaps = 8/225 (3%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D V+L E G+ +RYYE+KF P+++E R V Y EGL WV+ YY++G SW W+Y
Sbjct: 583 DTVRLWEEGYADRYYEQKFGVD-PQDKE-FRHKVARAYAEGLAWVLLYYFQGCPSWNWYY 640
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFA+D D+ +SFE G PFKPF QL+GV P++S+HA+PE + LM DP S I
Sbjct: 641 PYHYAPFAADFVDIGDMELSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEI 700
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+++E RN++ ++L
Sbjct: 701 IDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVGREVLL 760
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
+ HPL + K++ K LN +S+G+ G +
Sbjct: 761 LSDGHPLYQDL------VANFYSKKQGAPKYTLNMRVSEGLAGRV 799
>gi|440632608|gb|ELR02527.1| 5'-3' exoribonuclease 1 [Geomyces destructans 20631-21]
Length = 1388
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 289/754 (38%), Positives = 407/754 (53%), Gaps = 115/754 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + A T +++F +F+YI+ LF ++P KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDATFRMTEEQMFIAIFNYIEHLFGKIKPHKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + D E R++ REG+++P + + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTALDV-------ENAREKAIREGKEMPKE---EAFDSNCITPGTEFMAKLTEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ ++++LS VPGEGEHKIM Y+RL + P YD N RHCLYGLDADLIM
Sbjct: 152 NKKVSEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRLSKAQPDYDHNVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q K K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQSKA-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ +H+ +REYL+ EF+ P F DLE ++DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLMHLCIVREYLEIEFQELKEPGIMGFAFDLERVIDDFILMAFFVGNDFLPNLPNL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR---- 410
I EGA+ L+ +YK GGYL +G ++ R+ ++ + E R F+
Sbjct: 303 HINEGALALMFKIYKSVLPKAGGYLNEGGVINMPRLAILLEELSHVEYRFFESENSDAKW 362
Query: 411 -LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 469
++ A+ EK R+G V AQ D V F +R SP P
Sbjct: 363 FKGKQMAKVDVMEKGSRRKGKVVMTSAQKDVWKLVKIFVNNR-----SPEP--------- 408
Query: 470 LDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKE-------- 520
LD + K V L+ + VE EN + + F AKL++
Sbjct: 409 LDLPSSLPAKDRKFVEDLADSLHLDWKTVEDENG----DRHLQISFPAKLEQDDDEEEEQ 464
Query: 521 -------LLRDKSDAFNSD----NPEEDKVKLGEP------GWKERYYEEKFNAKTPEER 563
+LR N++ + EE + ++ + WK++YY+ KF K E
Sbjct: 465 DEESQLAILRVVKQYDNANIVDVSAEEAQAEMDKKYEEKFQEWKDKYYDGKFEWKRDNET 524
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 623
E T+ + Y +GL WV++YYY+GV SW W+Y YHY+P SD+ + +I+F+LG PF
Sbjct: 525 ELTK--LAENYVQGLQWVLYYYYQGVVSWPWYYAYHYSPMISDVIKGLKADINFKLGQPF 582
Query: 624 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 683
P+ QL+GV P S +P Y +LMTDP SPI DFYP DFE+DMNGK+ W+ + K+PF
Sbjct: 583 HPYEQLMGVLPDRSKKIVPTVYHELMTDPKSPIIDFYPRDFELDMNGKKMEWEAVVKIPF 642
Query: 684 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
IDE RLL + L++ E RN + F
Sbjct: 643 IDEKRLLSAMAPKNDMLSDAEKARNEFGVSLKFT 676
>gi|391869656|gb|EIT78851.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1035
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/429 (51%), Positives = 307/429 (71%), Gaps = 6/429 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ VIEE+P ++G +IPVDT++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F+Y DR+ MVRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGR---KLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
++++A ++ ++E R++F ++ + ++ + + +DSNVITPGT FM +L+ +L+Y+
Sbjct: 121 SAQEAKEADEKKEEFRKQFLKKSKGDQEIHEEVIQKTWDSNVITPGTPFMDILAASLRYW 180
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +LN DP WEK+K+I+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGLDADLI
Sbjct: 181 IAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLI 240
Query: 238 MLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
ML LATHE HF +LRE V F + C LCGQ GH A C G+AK K G+FDEKG
Sbjct: 241 MLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFDEKGKGTS 300
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ KP+ +L++ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L+I
Sbjct: 301 L--KPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 358
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
RE I+ L+A+++ +GGYLT ++ + +Q + ED IF++R ++ ++
Sbjct: 359 RENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQGLAKQEDAIFRRRRQVEEKKL 418
Query: 417 ERIKREKAQ 425
KR K +
Sbjct: 419 ANEKRRKEE 427
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 144/225 (64%), Gaps = 8/225 (3%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D V+L E G+ +RYYE+KF P+++E R V Y EGL WV+ YY++G SW W+Y
Sbjct: 583 DTVRLWEEGYADRYYEQKFGVD-PQDKE-FRHKVARAYAEGLAWVLLYYFQGCPSWNWYY 640
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFA+D D+ +SFE G PFKPF QL+GV P++S+HA+PE + LM DP S I
Sbjct: 641 PYHYAPFAADFVDIGDMELSFEKGTPFKPFEQLMGVLPASSNHAIPEVFHDLMQDPESEI 700
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP DF VD+NGK+++WQG+ LPFIDE RLL ++K L+++E RN++ ++L
Sbjct: 701 IDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDERHRNTVGREVLL 760
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
+ HPL + K++ K LN +S+G+ G +
Sbjct: 761 LSDGHPLYQDL------VANFYSKKQGAPKYTLNMRVSEGLAGRV 799
>gi|340520299|gb|EGR50535.1| exoribonuclease [Trichoderma reesei QM6a]
Length = 1029
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/433 (52%), Positives = 296/433 (68%), Gaps = 8/433 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIEE P+ D GV IPVDT++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEETPITTDDGVTIPVDTTRPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-----FDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +R+ + +DS+ FDSN ITPGT FM +L+++L
Sbjct: 121 RSAREAKEKEEDKQALIELLKRQNGGVFEAADSEAVVKKAFDSNSITPGTPFMDILAVSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W K+K+I+SDA VPGEGEHKIMS++R QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPAWAKLKIIISDATVPGEGEHKIMSFIRSQRASPNYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAK-RKAGEFDEKG 292
DLIML LATHE HF +LRE V F G+ C LCGQ GH A NC G AK E DE+
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFNEGKNRACKLCGQKGHEANNCRGTAKPNDMAEGDEQA 300
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
V P KP+ +LH+ LREYL E +P+ PF DLE +DD+IFMC FVGNDFLPH+P
Sbjct: 301 KAVQAPLKPFIWLHVSVLREYLAIELSVPDLPFRFDLERAIDDWIFMCCFVGNDFLPHLP 360
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
LEIRE I+ L +++ ++GGY+T L R + + + S E IF++R
Sbjct: 361 ALEIREHGIDTLTTIWRNSLPSMGGYVTKDGHIDLERAQVILDGLASQESAIFKRRKEQE 420
Query: 413 QRHAERIKREKAQ 425
R KR K Q
Sbjct: 421 DRREASFKRRKLQ 433
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 146/225 (64%), Gaps = 7/225 (3%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D V+L E G+++RYY++KF K P++ E R V Y EGL WV+ YY++G SW+W+Y
Sbjct: 590 DNVRLWEDGYEDRYYQQKF-GKDPQD-IEFRHKVAHAYVEGLAWVLLYYFQGCPSWEWYY 647
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFA+D KDL + ISFE G +PF QL+ V P+AS HALPE + +LMT+ +S I
Sbjct: 648 PYHYAPFAADFKDLAKMEISFEKGRVSRPFEQLMSVLPAASRHALPEVFHELMTEKDSEI 707
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP +FE+D+NGK+ +WQG+A LPFID RLL V+ L+ ++ RN+I D+L
Sbjct: 708 IDFYPEEFEIDLNGKKMAWQGVALLPFIDMKRLLKAVQSKYPLLSPDDIARNTIGKDVLI 767
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
+ +H +Y D+ K++ + +NP S+G+ G I
Sbjct: 768 LSDNH---EGLY--DDILTTFYSKKQDRSRLTINPANSNGLAGEI 807
>gi|189239340|ref|XP_973739.2| PREDICTED: similar to CG10354 CG10354-PA [Tribolium castaneum]
Length = 867
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/425 (55%), Positives = 303/425 (71%), Gaps = 10/425 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ IE++ V ++GV++P ++++PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVHCIEQKAVDVNGVRVPTNSAEPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRPAP DE+ +F+ IDR+F +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPRNEDEMMVAIFECIDRIFNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLP-PKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A+K+ + E +R+R E G KLP K + FDSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKETVEKINEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMARLSNCLHYYIH 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLNNDPGW+ IKVILSDANVPGEGEHKIM ++R QR P +DPNT+HCL G DADLIML
Sbjct: 181 ERLNNDPGWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCLCGADADLIML 240
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P + C +CGQ GH +C G A E + V +
Sbjct: 241 GLATHEPNFTIIRE-EFKPNKPRPCDICGQLGHEMKDCIGGAASA-----ESDTQKVFAE 294
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Y F+ + L+EYL+ E ++PN PF+ + E ++DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 295 TDYIFVRLNVLKEYLERELQMPNLPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREG 354
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
AI+ L+ +YK GG+LT+ +L RV+ + +G ED IF+ R Q+ +
Sbjct: 355 AIDRLIRLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTR---QQKELQFK 411
Query: 420 KREKA 424
REK+
Sbjct: 412 AREKS 416
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/316 (37%), Positives = 178/316 (56%), Gaps = 33/316 (10%)
Query: 492 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE--------------- 536
I + + +AE+ Q+ + +FKA+ K +L D+ +S+ ++
Sbjct: 388 IMSELGKAEDEIFKTRQQKELQFKAREKSML-TPVDSQSSNRGQKRHHEDDDESDDDQAH 446
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D+V+L E G+K+RYYE KF+ + + + R +V L Y GLCWV+ YYY+G SW+W+Y
Sbjct: 447 DEVRLWEDGFKDRYYESKFDVNS--DNLDFRNNVALHYVRGLCWVLRYYYQGCASWKWYY 504
Query: 597 PYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
PYHYAPFASD + + FE PF+P QL+GVFP+ASS +P+ + KLM+DP SP
Sbjct: 505 PYHYAPFASDFVHIAGLSTEFEEDSDPFRPLEQLMGVFPAASSKHVPQPWAKLMSDPESP 564
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DF++D+NGK+++WQG+A LPF++E RL + L+ EE RRN D L
Sbjct: 565 IIDFYPEDFKIDLNGKKFAWQGVALLPFVNEDRLFKALAPYYKELSPEEIRRNVRGDDRL 624
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPPV 772
+V + I L + +++ +K V V +GM G + C +
Sbjct: 625 YVGAKNAGYNQIKQL--YVQKISVKMEVHVS-------IEGMQGTVLLSDECVD--YGGY 673
Query: 773 FRSPVASMEDIMGNQV 788
SP+ ++DIM N V
Sbjct: 674 LDSPIRGLDDIMNNMV 689
>gi|378727731|gb|EHY54190.1| phosphodiesterase/alkaline phosphatase D [Exophiala dermatitidis
NIH/UT8656]
Length = 1413
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 296/758 (39%), Positives = 418/758 (55%), Gaps = 117/758 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T +++F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEEKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E+ R++ +EG ++P K D FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA-------EKAREKAIKEGLEMP-KEDP--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ D W+ ++V+LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 ISKKVSEDVDWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q A +K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------ATKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ P F D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELEQPGALSFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ L+ YK+ +GGY+ + +L R+ + A+ E R F+
Sbjct: 302 LHINEGALALMFQKYKEVLPKMGGYINEQGVINLERLGVLLDALSEVEYRFFE------- 354
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL--- 470
+E + A+R + D+L P SR SP + + V +
Sbjct: 355 --SEYADAKWINAKRNAQLNDENGEDTLKP------SRGPVRISPEQKKLFKEVKKYFIA 406
Query: 471 -DNGKGTSGRPHKVP------------RLSSGATIGAAIVEAE--NSF----------ET 505
N + +P K+P +L++ + + E E N F +
Sbjct: 407 PANKDPATWQPLKLPPTLPARDRKFIEQLATDLNLRWSTQEDEEGNRFIQLEFPPTDKDA 466
Query: 506 DPQENKEEFKAKLKELLR---DKSDAFNSDNPEEDKVKLGEPG---WKERYYEEKFNAKT 559
D +E++E A + L R K + + ++D K + WK++YY EKF+
Sbjct: 467 DSEEDEEAQLAVTRVLKRYENAKVEDVTDEQTQQDMKKKYDAKFLEWKDKYYREKFDWGL 526
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ EE RK + Y +GL WV+ YYY G+ SW WFY YHY+P SD+K +++F+L
Sbjct: 527 -DNDEELRK-LAENYVQGLQWVLFYYYRGIASWPWFYQYHYSPMISDIKKGLGADLNFQL 584
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G PFKPF QL+GV P S +PE Y +LMT +SPI DFYP DFE+DMNGK+ W+ +
Sbjct: 585 GQPFKPFQQLMGVLPDRSKKIVPEVYHELMTSKDSPIIDFYPRDFELDMNGKKMEWEAVV 644
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
K+PFIDE RLL ++ + L+E+E RN + FV
Sbjct: 645 KIPFIDEKRLLKAMEPKDALLSEDERVRNDFGVSLKFV 682
>gi|213407328|ref|XP_002174435.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212002482|gb|EEB08142.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 1322
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 282/739 (38%), Positives = 407/739 (55%), Gaps = 98/739 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+RW++E+YPL + +++++ +IP E+DNLYLDMNGI+H
Sbjct: 1 MGIPKFFRWMSERYPLC-SQLVQDD-------RIP-----------EFDNLYLDMNGILH 41
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D + D+++ +F+YI+ LF ++P+KLLYMA+DG APRAKMNQQRSRR
Sbjct: 42 NCTHKNDDHSSAALPEDQMYIAIFNYIEHLFQKIKPKKLLYMAVDGCAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +KDA D+ R++ ER G + FDSN ITPGT FM +S L Y+I
Sbjct: 102 FRTAKDAYDA-------RRKAERNGEVIAEDP----FDSNCITPGTVFMQRISEQLHYFI 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W +++ILS + PGEGEHKIM Y+R Q+ P Y+PNTRHCLYGLDADLIM
Sbjct: 151 QKKVSEDSDWSGVQIILSGHDCPGEGEHKIMEYIRTQKAQPNYNPNTRHCLYGLDADLIM 210
Query: 239 LALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L +H+ HF +LRE V F P ++ +A+ E +
Sbjct: 211 LGLLSHDPHFCLLREEVTFGPARK------------SASKE------------------L 240
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + LH+ LREYL+ EF N PF DLE I+DDFI + FFVGNDFLP++P L
Sbjct: 241 ANQKFYLLHLSLLREYLEAEFEECRDNLPFAYDLERIIDDFILLAFFVGNDFLPNLPGLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I EGA+ L+ VYK + GY+ + ++ R++ + + +E +F++
Sbjct: 301 INEGALALMFNVYKSVLPLMEGYINEAGVINMDRLDLVLLELEKFEKAVFKEECYSSNAD 360
Query: 416 AERIKREKAQARRGDDVEP----LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
E + Q R ++ +P + Q + + +F SR Q + +L
Sbjct: 361 GEAPAFDFNQFLRNNNKDPSYLTVKQKELYCLLKKFLYSR---------EQYLDITDKL- 410
Query: 472 NGKGTSGRPHKVPRLSSGATIGAAIV----------EAENSFETDPQENKEEFKAKLKEL 521
+S + RL+S + A+ V A + E +E + ++ E+
Sbjct: 411 ----SSEDTRFLRRLASKLGLMASTVVFADGSSCLRVAFKNLNFSDSEEDDEEQDEIGEV 466
Query: 522 LR--DKSDAF-NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGL 578
L DK + N+ E+K + G WK+ YY K +E+E + + RY EGL
Sbjct: 467 LEKFDKLNIIDNTTKDSEEKFEKGFEMWKDNYYRSKVGFSYYDEKE--LEQMAKRYVEGL 524
Query: 579 CWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASS 638
WV+ YYY G SW WFY YHY+P SD++ +F I+F++G PF+PF QL+ V P+ S
Sbjct: 525 QWVLFYYYRGCQSWGWFYDYHYSPKISDVRRGLRFGITFDMGKPFRPFEQLMAVLPARSK 584
Query: 639 HALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEH 698
+P YR LMTDPNSPI DFYP +FE+D N K+ SW+ + K+PFI+E RL D +K EH
Sbjct: 585 SLVPPCYRDLMTDPNSPIIDFYPENFELDQNEKKASWEAVVKIPFIEETRLQDALKSREH 644
Query: 699 TLTEEEARRNSIMADMLFV 717
LT E RN +LF+
Sbjct: 645 LLTAAELHRNEFHPPVLFI 663
>gi|241786594|ref|XP_002414458.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
gi|215508669|gb|EEC18123.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
Length = 759
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/441 (54%), Positives = 308/441 (69%), Gaps = 12/441 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL++KYP +V +EE+ V+DGVK+PVD +KPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEK--VVDGVKVPVDMTKPNPNDVEFDNLYLDMNGIIH 58
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP DE+ +F+YIDR+ +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 59 PCCHPENKPAPKNEDEMMVDIFEYIDRIMSVVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 118
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
ASK+ A+ E R+R E +G LPP K S+ FDSN ITPGT FMA L+ L YY+H
Sbjct: 119 ASKETAEKVEEMSRIRTELRDKGIPLPPEKPKSEHFDSNCITPGTPFMARLAKCLHYYVH 178
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+NNDPGW+ I+VILSDANVPGEGEHKIM ++R QR P +DPNT HCL G DADLIML
Sbjct: 179 DRMNNDPGWKNIEVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCLCGADADLIML 238
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE +F+I+RE F P Q C LCGQ GH +C+G AK K GE ++ + +
Sbjct: 239 GLATHEPNFTIIRE-EFKPNQPRPCELCGQLGHEMKDCQGLAKEKTGELEKP----IGCE 293
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ FL + LREYL + + N PF ++E +DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 294 TEFIFLRLNVLREYLTRDLHMDNLPFTFNIERAIDDWVFMCFFVGNDFLPHLPSLEIREG 353
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER- 418
AI+ L+ +YKK GGYLT+ +L RV+ + + + +A ++A R
Sbjct: 354 AIDRLITLYKKAVYKTGGYLTENGFVALERVQLIMSGKCGFSLLLAVGQAVGATQNARRE 413
Query: 419 ---IKREKAQARRGDDVEPLA 436
++RE + RR LA
Sbjct: 414 AYDMRREGMEHRRNLSTGNLA 434
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 139/211 (65%), Gaps = 5/211 (2%)
Query: 530 NSDNPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 587
+S + EE D+V+L E GWKERYY KF+ + + R +V Y EGLCWV+ YYY+
Sbjct: 466 DSSDEEEPHDEVRLWEDGWKERYYVSKFDINS--DNVAFRHEVATAYVEGLCWVLRYYYQ 523
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYR 646
G SW+WF+PYHYAPFASD ++ I+FE PFKP QL+ VFP+AS LP +
Sbjct: 524 GCASWKWFFPYHYAPFASDFINVGDIKINFERDTQPFKPMEQLMSVFPAASKQHLPPAFG 583
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LM DP+SPI DFYP DF++D+NGK+Y+WQG+A LPF+DE RLL+ VK + TLTE+E +
Sbjct: 584 DLMDDPDSPIIDFYPIDFKIDLNGKKYAWQGVALLPFVDERRLLETVKTVYPTLTEDEVK 643
Query: 707 RNSIMADMLFVLLSHPLSASIYTLDEHCKQL 737
RN D+ +V H + + L E CK
Sbjct: 644 RNIRGDDVFYVRKGHRGYSYLLGLYEACKDF 674
>gi|154276492|ref|XP_001539091.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
gi|150414164|gb|EDN09529.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
Length = 475
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/420 (53%), Positives = 298/420 (70%), Gaps = 8/420 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +++ V+EE P IDG ++PVDT+KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+ +P P T +++ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERL-----RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
++++A ++ ++E +Q + G L + ++ +DSNVITPGT FM VL+ AL+
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDVLAAALR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ +LN DP WE +K+I+SDA VPGEGEHKIM ++R QR+ +DPNTRH +YGLDAD
Sbjct: 181 YWVAYKLNTDPAWENLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LCGQ GH+A C+G AK K GEFDEKG
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKG 300
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P KP+ +LH+ LREYL E +P PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 301 --SPLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+IRE I+ L+A+++ A+ GYLT L R + +Q + ED IF++R + +R
Sbjct: 359 DIRENGIDTLIAIWRDNIPAMNGYLTKDGHVDLGRAQLILQGLAKQEDAIFRRRRQTEER 418
>gi|443899706|dbj|GAC77035.1| multidrug resistance-associated protein [Pseudozyma antarctica
T-34]
Length = 1165
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/438 (53%), Positives = 311/438 (71%), Gaps = 11/438 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-----VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V+ V EEE G + +P+DTS PNPNG E+D LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEENKTAPGPDGTTITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE +PAP T +E+ +F Y +R+ MVRPR+LL MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVSMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKL---PPKSDSQVFDSNVITPGTEFMAVLSI 172
SRRFRA+K+A + E + E+ +G + PK + +DSN ITPGT FM +L+
Sbjct: 121 SRRFRAAKEAREKHEETQAALAEWRAKGLAVTEDAPKESKKAWDSNAITPGTPFMDLLAA 180
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
+L+Y++ ++N DPGW+ I+VI+SDA+VPGEGEHKIM ++R QR+ P +DPNT+H +YGL
Sbjct: 181 SLRYWVAHKINTDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGL 240
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML+LATHE +F +LRE VF + K C LCGQPGH AA+C G A++K+GE DEK
Sbjct: 241 DADLIMLSLATHEPYFKVLREDVFASDNKPKTCNLCGQPGHFAASCTGAARKKSGEHDEK 300
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
+ KKP+ FL + TLREYL+ E +PN PF DLE +DD++F+ FFVGNDFLPH+
Sbjct: 301 A-QTPPEKKPFIFLDVATLREYLEVELNMPNLPFAFDLERAIDDWVFLIFFVGNDFLPHL 359
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P+LEIR+GAI+ L+ ++KKE A+GGYLT+ K L R + + + S ED IF++R
Sbjct: 360 PSLEIRDGAIDTLLKIWKKELPAMGGYLTNHGKVELARAQLILNGLASQEDEIFRRRKEE 419
Query: 412 HQRHAERIK-REKAQARR 428
R K RE Q RR
Sbjct: 420 EDRRENNKKRREDMQKRR 437
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 15/261 (5%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED VK+ EPG++ERYY EKF + + R+ VV Y EGL WV+ YYY+GV SWQW+
Sbjct: 653 EDTVKMWEPGYRERYYREKFGVDLSDT--DFRRQVVKSYIEGLSWVLAYYYQGVPSWQWY 710
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YP+H++PFA+D +DL+ +I FELG PFKPF QL+GV P+ S ++P + LMT+ +S
Sbjct: 711 YPFHFSPFAADFEDLESLDIKFELGAPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSD 770
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP++FE+DMNGK+ +WQG+A LPFIDE RLLD + LT++E RRN + L
Sbjct: 771 IIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALSDKYPLLTDDEVRRNGFGNNTL 830
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKE-----RLNPELSDGMNGYISPCAGDPHP 770
FV L + C+Q+ K+R + +NP LS G+ G + P
Sbjct: 831 FVGDESRLYEFL------CEQIYAKKRDGDDKPFEPVPMNPALSGGITGSVKPDPVCVPG 884
Query: 771 PVFRSPVAS--MEDIMGNQVL 789
F SP+ S ++DI ++ +
Sbjct: 885 STFNSPLTSQDLKDIHNDRSI 905
>gi|303319605|ref|XP_003069802.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240109488|gb|EER27657.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|320040722|gb|EFW22655.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 1445
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 291/748 (38%), Positives = 411/748 (54%), Gaps = 96/748 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ +R+ E PK D FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EIAKEKAIREGIEM------PKEDP--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++VILS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDAKWQGVEVILSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q++ +K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQNQ-------------------KKVKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ FE D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELEQEGALQFEFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK+ L GY+ + + +L R+ + ++G E R F+ +
Sbjct: 302 LHINEGALAWMFKVYKEVLPKLDGYINERGRINLNRLGVLLDSLGDVEFRFFEAEYSDSR 361
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
++ R + + DD + L ++ P + S++ S P LD
Sbjct: 362 WLKSKLSRGEEKPEILDDPKAL----TISPAQKHILSKVKKYISHRPVNDDGYPVPLDLS 417
Query: 474 KGTSGRPHK-VPRLSSGATIGAAIVEAEN----------------SFETDPQENKEEFKA 516
R K V +L+ I + V E+ + ++ ++ EE +
Sbjct: 418 PSLPARDRKFVEQLADDLRISWSSVSNEHGDRFLRLQLPSKQQLANGDSASEDEDEEAQI 477
Query: 517 KLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEEREETRKD 569
+ +L+ +A + E+ ++ E WK +YYE KF T + EE RK
Sbjct: 478 AVLRVLKKYENAKVKETTAEEAQQIAEKKYEQKFQEWKNKYYEGKFGWGT-DNDEEMRK- 535
Query: 570 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 629
+ Y +GL WV++YYY GV SW WFY YHY+P SD+K ++ F+LG PF PF QL
Sbjct: 536 LTENYVQGLQWVLYYYYRGVASWPWFYRYHYSPMISDVKRGLAADMDFKLGQPFFPFQQL 595
Query: 630 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+GV P S +P+ Y +LM P+SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RL
Sbjct: 596 MGVLPDRSKKIVPQAYHELMISPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEDRL 655
Query: 690 LDEVKKIEHTLTEEEARRNSIMADMLFV 717
L + EH LT EE RN+ + F
Sbjct: 656 LKAMASKEHLLTPEEKARNNFGVTLKFT 683
>gi|171690192|ref|XP_001910021.1| hypothetical protein [Podospora anserina S mat+]
gi|170945044|emb|CAP71155.1| unnamed protein product [Podospora anserina S mat+]
Length = 1078
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/452 (52%), Positives = 301/452 (66%), Gaps = 26/452 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE+ P+ +D G IPVDT+KPNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDTPITMDDGAVIPVDTTKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI----------------- 102
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEIFKYTDRVVNMVRPRKLLMIAVGMSNPSLDYQRQKLTRS 120
Query: 103 DGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS-----QVFDS 157
DGVAPRAKMNQQRSRRFRA++DA + ++E+L + +++ + + FDS
Sbjct: 121 DGVAPRAKMNQQRSRRFRAARDAKEKEEDKEKLLKMLQKDKKSTVQVQPVEEVVQKAFDS 180
Query: 158 NVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRN 217
N ITPGT FM +L+ +L+Y+ +LN DP W KIKVI+SDA +PGEGEHKIM YVR QRN
Sbjct: 181 NSITPGTPFMDILAASLRYWCSYKLNTDPAWAKIKVIISDATIPGEGEHKIMEYVRSQRN 240
Query: 218 LPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAAN 276
PG+DPNTRH +YGLDADLIML LATHE HF +LRE VF + + C LCGQ GH AAN
Sbjct: 241 SPGHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDARPRLCKLCGQKGHDAAN 300
Query: 277 CEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDF 336
C G+AK K GEF EK + P KP+ +LH+ REYL E +P PF DLE +DD+
Sbjct: 301 CRGEAKEKEGEFGEK--DRAAPLKPFIWLHVNIFREYLAVELNVPGLPFAFDLERAIDDW 358
Query: 337 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 396
+FMCFFVGNDFLPH+P LEIRE I+ L+A++K ++GGYLT L R + +
Sbjct: 359 VFMCFFVGNDFLPHLPALEIRENGIDTLVAIWKDNLPSMGGYLTKDGHVDLERAQLIMAG 418
Query: 397 VGSYEDRIFQKRARLHQRHAERIKREKAQARR 428
+ ED IF++R R KR K Q +
Sbjct: 419 LAKQEDAIFRRRKETEDRREAGFKRRKLQQEK 450
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 145/230 (63%), Gaps = 8/230 (3%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D V+L E G+ +RYYE+KF K + E R V Y EGL WV+ YY++G SW+WFY
Sbjct: 596 DTVRLWEEGYADRYYEQKF--KVDPKDIEFRHKVARAYVEGLAWVLMYYFQGCPSWEWFY 653
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFA+D DL + I+F+ G +PF QL+ V P+AS HA+PE + LMT+ +S I
Sbjct: 654 PYHYAPFAADFVDLGKMTINFDKGRISRPFEQLMSVLPAASRHAIPEVFHDLMTNEDSEI 713
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP +F++D+NGK+ SWQGIA LPFI+ RLL ++ + L+EE+ RN ++L
Sbjct: 714 IDFYPEEFDIDLNGKKMSWQGIALLPFIEMPRLLKAMEPKQKLLSEEDRARNEPGKEVLI 773
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAG 766
+ +HP+ D+ ++ K+ V K ++ LS+G++G I G
Sbjct: 774 ISDAHPV------YDDITQKFYSKKPVGDKVEIDSALSEGLSGKIEKIEG 817
>gi|294884783|gb|ADF47407.1| exoribonuclease-2, partial [Dugesia japonica]
Length = 801
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 278/661 (42%), Positives = 374/661 (56%), Gaps = 70/661 (10%)
Query: 145 KLP-PKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGE 203
KLP PKS S+ FDSN ITPGT FMA L+IALQYY++ +LN+DPGW+ I+VILSDAN PGE
Sbjct: 2 KLPEPKSASEHFDSNCITPGTPFMARLTIALQYYVYNKLNSDPGWKNIQVILSDANAPGE 61
Query: 204 GEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK 263
GEHKIM Y+R QR P +DPNT+HCL G DADLIML LATHE +F+I+RE F P Q
Sbjct: 62 GEHKIMDYIRRQRASPTHDPNTKHCLCGADADLIMLGLATHEPYFTIIRE-EFKPNQPRP 120
Query: 264 CFLCGQPGHLAANCEGKAKRKAGEF----DEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
C +CGQ H+ C G + EF + KG E + F+H+ TLREYL E
Sbjct: 121 CEICGQMDHVMTECAGLP---SAEFNIAANNKGSET-----EFIFIHLNTLREYLQQELV 172
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
IPN F+ D E VDD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK G+L
Sbjct: 173 IPNLHFQYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREKAIDRLITIYKSSVSKTNGWL 232
Query: 380 TDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD 439
TD K ++ RV+ ++ + ED IF+ R R + + + +R
Sbjct: 233 TDSGKVNISRVQLIMKDLALLEDEIFKNRRENEVSFRRRNRENRNRTKR----------Q 282
Query: 440 SLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA 499
L + F+ Q S L +G+ R S + AI+E+
Sbjct: 283 KLNENAMFN-------------QHSTDFVNLSSGE----------RFSRDSFKNNAIMES 319
Query: 500 ENSF--ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK---VKLGEPGWKERYYEEK 554
+N+ + PQ +A K D D + N E DK VKL E G++ RYY+ K
Sbjct: 320 KNNLNKQVGPQVPASNTRAPAKRKFDDDIDPEDKKNEELDKRDEVKLWEDGYRSRYYQSK 379
Query: 555 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 614
F +E + +V +Y GLCWV+ YYY+G SW W+YPYHYAPFA D +L + +
Sbjct: 380 FGVSV-DENPDFCVNVAHQYLRGLCWVLAYYYQGCVSWTWYYPYHYAPFAVDFVNLSEAD 438
Query: 615 ISFE-LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
++FE PF P QL+GVFP+ S +P ++ LMTD SP+ D YPT+F++D+NGKRY
Sbjct: 439 VTFEKKTKPFNPLEQLMGVFPADSKSHVPPVWQDLMTDSESPVIDLYPTNFKIDLNGKRY 498
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIYTL 730
W G+A LPF+DE RLL +K+ LTE+E RN I D FV HP++ IY L
Sbjct: 499 DWMGVALLPFVDEVRLLQVLKERYSMLTEDEKERNVIGPDRYFVRSDHPVADLIKVIYEL 558
Query: 731 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPV-ASMEDIMGNQV 788
+++ + ++P L++G+ G I P SP+ S EDI QV
Sbjct: 559 EDNSDSV-----------IDPSLTNGVVGRIWKDLKSYQPGSTVNSPITGSCEDIPAVQV 607
Query: 789 L 789
+
Sbjct: 608 I 608
>gi|315040952|ref|XP_003169853.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
gi|311345815|gb|EFR05018.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
Length = 1038
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/415 (55%), Positives = 295/415 (71%), Gaps = 16/415 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL+ KYP +V+ V+EE+P IDG +IPVD +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +P P E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLP-PKSD--------SQVFDSNVITPGTEFMAVLS 171
+++DA AE+E+ + EF + +K KSD + +D+NVITPGT FM +L+
Sbjct: 121 SAQDA---KAEDEK-KVEFAKLLKKQKRGKSDVTIAEEVIKKTWDTNVITPGTPFMDILA 176
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+AL+Y++ +L+ DPGWEK+K+I+SDA VPGEGEHKIM +VR QR P YDPNTRH +YG
Sbjct: 177 LALRYWVAYKLSTDPGWEKLKIIISDATVPGEGEHKIMEFVRSQRACPEYDPNTRHVIYG 236
Query: 232 LDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
LDADLIML L THE HF +LRE V F + C LCGQ GH+ C GKAK K GEFDE
Sbjct: 237 LDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKQGEFDE 296
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
K + P KP+ +LH+ LREYL E ++P PF DLE +DD++FMCFFVGNDFLPH
Sbjct: 297 K--QKGSPLKPFIWLHVSILREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPH 354
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
+P+LEIRE I+ L+A+++ +GGYLT + L + + +Q + ED IF
Sbjct: 355 LPSLEIRENGIDTLIAIWRDNIPQMGGYLTKDGRVDLAKAQLILQGLAKQEDAIF 409
>gi|407925965|gb|EKG18938.1| Putative 5-3 exonuclease [Macrophomina phaseolina MS6]
Length = 1429
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 285/746 (38%), Positives = 417/746 (55%), Gaps = 96/746 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D +PT + D++F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-NDSDSPTHRMSEDKMFIAIFNYIEHLFGKIKPQKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR ++DA E R++ REG ++P + FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTARDA-------EEAREKAIREGVEMPAEP---AFDSNCITPGTEFMARLTQHLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R ++ PGYDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDVDWQGVEIVLSGHEVPGEGEHKIMEYIRQAKSQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCIVREYLELEFQELEQPGALDFPFDMERVIDDFILMAFFVGNDFLPNLPH 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-KRARLH 412
L I EGA+ L+ VYKK GY+ +G +L R+ + + E R F+ + A
Sbjct: 302 LHINEGALALMFGVYKKVLPKAKGYINEGGVINLERLALLLDELSHVEYRFFESENADAS 361
Query: 413 QRHAERIKREKAQAR---RGDDVEPLAQPDSLVPVSRFHGSRLASG-------PSPSPYQ 462
+++ RE R RG V Q D + ++ +R +SG P P
Sbjct: 362 WFKGKQMGREDVMERTKKRGKIVMTTGQKDIYKRIRQYVNNRPSSGEGEPLDLPPTLPAS 421
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 522
+ V L + + + + + A ++ + + +E++E A L+ L
Sbjct: 422 DRKFVEDLADSLHLQWKTVEDDQGERHLQV-AFPPSLKDDDDGEEEEDEEAQNAILRVLK 480
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNA------KTPEE-----REETRKDVV 571
R + +P+E + ++ ++ Y+EKFN+ K+ E +EE RK +
Sbjct: 481 RYDNAQIEDISPDEAQAEM------KKKYDEKFNSWKDNYYKSKLEWGLNDKEELRK-MT 533
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
Y +GL WV+ YYY GV SW W+Y YHYAP SD+K+ + +++F+LG PF+P+ QL+G
Sbjct: 534 ENYVQGLQWVLFYYYRGVASWPWYYGYHYAPMISDVKEGLKADLNFKLGQPFRPYQQLMG 593
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P S +P Y +LMT SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 594 VLPDRSKSIVPAAYHELMTQKESPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLP 653
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFV 717
+ +H LT+ E RN + F
Sbjct: 654 AMATKDHLLTQGERDRNEFGVTLKFT 679
>gi|119183089|ref|XP_001242618.1| hypothetical protein CIMG_06514 [Coccidioides immitis RS]
gi|392865522|gb|EAS31317.2| exonuclease Kem1 [Coccidioides immitis RS]
Length = 1445
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 290/748 (38%), Positives = 411/748 (54%), Gaps = 96/748 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ +R+ E PK D FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EIAKEKAIREGIEM------PKEDP--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++VILS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDAEWQGVEVILSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q++ +K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQNQ-------------------KKVKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ FE D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELEQEGALQFEFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK+ L GY+ + + +L R+ + ++G E R F+ +
Sbjct: 302 LHINEGALAWMFKVYKEVLPKLDGYINERGRINLNRLGVLLDSLGDVEFRFFEAEYSDSR 361
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
++ R + + DD + L ++ P + S++ S P LD
Sbjct: 362 WLKSKLSRGEEKPEILDDPKAL----TISPAQKHILSKVKKYISHRPVNDDGYPVPLDLS 417
Query: 474 KGTSGRPHK-VPRLSSGATIGAAIVEAEN----------------SFETDPQENKEEFKA 516
R K V +L+ I + V E+ + ++ ++ EE +
Sbjct: 418 PSLPARDRKFVEQLADDLRISWSSVSNEHGDRFLRLQLPSKQQLANGDSASEDEDEEAQI 477
Query: 517 KLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEEREETRKD 569
+ +L+ +A + E+ ++ E WK +YYE KF T + EE RK
Sbjct: 478 AVLRVLKKYENAKVKETTAEEAQQIAEKKYEQKFQEWKNKYYEGKFGWGT-DNDEEMRK- 535
Query: 570 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 629
+ Y +GL WV++YYY GV SW WFY YHY+P SD+K ++ F+LG PF PF QL
Sbjct: 536 LTENYVQGLQWVLYYYYRGVASWPWFYRYHYSPMISDVKRGLGADMDFKLGQPFFPFQQL 595
Query: 630 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+GV P S +P+ Y +LM P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E RL
Sbjct: 596 MGVLPDRSKKIVPQAYHELMISPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFINEDRL 655
Query: 690 LDEVKKIEHTLTEEEARRNSIMADMLFV 717
L + EH LT EE RN+ + F
Sbjct: 656 LKAMASKEHLLTPEEKARNNFGVTLKFT 683
>gi|430814593|emb|CCJ28201.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1318
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 279/724 (38%), Positives = 391/724 (54%), Gaps = 101/724 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+RW++E+YP+ + E+ ++P E+DNLYLDMNGIIH
Sbjct: 1 MGIPKFFRWISERYPMCSQLITEK--------RVP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H ++ +E F +F YI+ LF ++P+KL ++++DGVAPRAKMNQQRSRRF+
Sbjct: 42 NCTHMDENKKEIPENEAFLAIFKYIEHLFGTIKPKKLFFLSVDGVAPRAKMNQQRSRRFK 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+K+A + L QE +G +P FDSN ITPGT FM LS L+Y+I+
Sbjct: 102 AAKEAYE-------LYQEKISKGEDVPKDP----FDSNCITPGTLFMKRLSEQLKYFINR 150
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+++ D W+ I++I S VPGEGEHKIM Y+RL + P Y+PN RHCLYGLDADLIML
Sbjct: 151 KVSEDTNWKGIEIIFSGHEVPGEGEHKIMEYIRLSKAQPDYEPNLRHCLYGLDADLIMLG 210
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L +H+ HF +LRE V G K+K E +E+
Sbjct: 211 LLSHDPHFCLLREEVLF---------------------GSVKKKKQELEEQN-------- 241
Query: 301 PYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ +H+ LREYL+ EF+ IPN P+ + E I+DDFI + FFVGNDFLPH+P L I
Sbjct: 242 -FYLMHLCLLREYLEMEFQELTNIPNFPY--NFEKIIDDFILLAFFVGNDFLPHLPKLHI 298
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
EGA+ L+ +YKK GY+ + +L R+ ++ + +K+ R R+
Sbjct: 299 NEGALALVFKIYKKVIPKARGYINNAGVINLERLALVLEEL--------EKQEREDFRNE 350
Query: 417 ERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGT 476
K ++G Q + + RF L + PS ++
Sbjct: 351 LEDKNWVGSKKKGLLTMTSNQKKLFLEMERFVSGNLETLVLPSTLSATD----------- 399
Query: 477 SGRPHKVPRLSSGATIGAAIVEAENS----FETDPQ-ENKEEFKAKL-KELLRDKS---- 526
V +++ + EN FE D + EN E K + +EL R K+
Sbjct: 400 ---RSFVFKMADDFYVKCTKYTIENEKYLRFEKDNKVENGNEIKDIIDRELSRYKNAIIL 456
Query: 527 DAFNSDNPEEDKV-KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 585
D D+ +ED + + WK+ YY EK + ++ K++ Y EGL WV+ YY
Sbjct: 457 DIEKDDSHKEDAIFEEKWIKWKDSYYIEKLGFSINDTKK--LKEMAENYIEGLQWVLFYY 514
Query: 586 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 645
Y GV SW WFY YHY+P SD+K N+SF LG PFKPF QL+ V P S +P+ +
Sbjct: 515 YRGVSSWSWFYKYHYSPKVSDIKKGFAANLSFTLGTPFKPFEQLMAVLPERSKKLVPKPF 574
Query: 646 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEA 705
LM + SPI DFYP DFE+DMN K+ SW+ IAK+PFI+E LL +K EH LT+EE
Sbjct: 575 ADLMVNETSPIRDFYPEDFELDMNDKKASWEAIAKIPFINEELLLSVIKAKEHLLTDEEK 634
Query: 706 RRNS 709
RN+
Sbjct: 635 NRNT 638
>gi|440793174|gb|ELR14365.1| Exonuclease ii, putative [Acanthamoeba castellanii str. Neff]
Length = 1421
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 277/673 (41%), Positives = 376/673 (55%), Gaps = 77/673 (11%)
Query: 55 MNGIIHPCFHPE---DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
MNGIIH C HPE + + E+ +F YIDRLF V+P+KL+Y+AIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHPEWNDNVLNKLSEKEMIIQIFHYIDRLFHAVKPQKLIYLAIDGVAPRAKM 60
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
NQQR RR R ++++ ++ E+ R+ E K +FDSN ITPGTEFMA LS
Sbjct: 61 NQQRQRRLRTAQESKEAL---EKARETGE--------KVQEDMFDSNCITPGTEFMAKLS 109
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
L+Y+I ++ D W K++VILS VPGEGEHKIM Y+R Q+ LP +DPNTRHCLYG
Sbjct: 110 DYLKYFIRKKIKEDSAWRKVEVILSGHEVPGEGEHKIMEYIRRQKMLPEHDPNTRHCLYG 169
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
LDADLIMLALA+HE HF++LRE V G+ K+K
Sbjct: 170 LDADLIMLALASHEPHFALLREEV---------------------TFGRRKKKP------ 202
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
E PK +Q L + LREYLD EFR PF DLE ++DDF+ CFFVGNDFLP++
Sbjct: 203 --EATPPK--FQLLFVNLLREYLDEEFRT-ELPFGYDLERVIDDFVLFCFFVGNDFLPNL 257
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P ++I +GA++ + +Y++ LGGY+T+ + R E F++ + YE + L
Sbjct: 258 PYMDIADGALDKMFDIYRELLPTLGGYITEKGEILWERCEKFLKQIAKYEQEMLSTMPPL 317
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
H E Q+ + D+ E +PD S+F+ +L +
Sbjct: 318 HLEVLE-------QSLQSDNEEEEDRPDE-ADRSKFNAWQLK-------------MKEKQ 356
Query: 472 NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNS 531
N SG H V G + AE ET E + K+ + + A
Sbjct: 357 NTLRASGEKHPVANDEGGNSNEVEDALAELDEETVVFEGGLKAKSDSEYDFAAMAAASEK 416
Query: 532 DNPEEDKVKLGEP-------GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
N + ++ + E WK YY +KF + E EE K + Y EGL WV+ Y
Sbjct: 417 FNEQRNRPRDEEEEEEYDDDSWKNWYYRDKF--RIGLENEEYHKHLRTSYLEGLVWVLRY 474
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY G CSW WF+P+HYAP SDL +L + + F+LG PF PF QL+GV P+AS LP
Sbjct: 475 YYRGCCSWNWFFPFHYAPLCSDLVNLTSYKLKFDLGTPFYPFQQLMGVLPAASKTLLPVP 534
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE-HTLTEE 703
Y++LMT SPI DFYP +F+VDMNGKR +W+ IA +PFIDE RLLD + ++ + L+E+
Sbjct: 535 YQELMTRATSPIIDFYPEEFKVDMNGKRNAWEAIALIPFIDEKRLLDAMDTVDKNRLSEK 594
Query: 704 EARRNSIMADMLF 716
E +R+S +F
Sbjct: 595 ERKRDSFGVAYVF 607
>gi|346974250|gb|EGY17702.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1404
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 282/750 (37%), Positives = 410/750 (54%), Gaps = 106/750 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ VI E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQVIAEN-------RIP-----------EFDALYLDMNGIIH 41
Query: 61 PCFHP---EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H ED + +E+F +F+YI+ LF ++P+KL YMAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFYMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E R++ ++G ++P ++ FDSN ITPGTEFMA LS L+Y+
Sbjct: 102 RFRTALDA-------ENAREKAIKDGVEMPKEAP---FDSNCITPGTEFMAKLSRQLKYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
++ ++ D W++ +++LS VPGEGEHKIM Y+R + P YD N RHCLYGLDADLI
Sbjct: 152 VNKKVTEDADWQECEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDTNVRHCLYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+ +K K+ E + +
Sbjct: 212 MLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEHQN----- 246
Query: 298 PKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
+ LH+ +REYLD EF+ I N P+ DLE ++DDFI M FF+GNDFLPH+
Sbjct: 247 ----FYLLHLCIVREYLDLEFQELKQDGILNFPY--DLERVIDDFILMGFFIGNDFLPHL 300
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG-----SYEDRIFQ 406
P L I EGA+ + +YK GY+ +G +L+R++ + + +E +
Sbjct: 301 PRLHINEGALASMFRIYKSILPECDGYINEGGVINLQRLQRLLTELAKDETDQFEHDVSD 360
Query: 407 KRARLHQRHAERIKREKAQAR-RGDD-VEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 464
+R ++ +E+ ++ Q++ RG V AQ D + + + + P+P P
Sbjct: 361 ERWFQSKQISEQQQKNAVQSKQRGKGVVMTSAQKD----LWKNNIKPYLTKPTPEP---- 412
Query: 465 ECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFE----TDPQENKEEFKAKLK 519
LD G + K V L+ + + E ++ T PQ + +
Sbjct: 413 -----LDLGTELNAADRKFVQDLADAVHVDWSTKEDDDGHRHLILTSPQSEDNNDEEEEG 467
Query: 520 ELL-------RDKSDA--FNSDNPEE---DKVKLGEPGWKERYYEEKFNAKTPEEREETR 567
L DK+ +D+ ++ D K GWK +YY +KF +P+ ++
Sbjct: 468 TLALFRVMKNYDKATVVDITADDAKQHYADLYKQKYQGWKTKYYLQKFEDWSPDNYDKEL 527
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
+ Y +GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG PF+P+
Sbjct: 528 TALCENYVQGLQWVLYYYYRGIASWPWFYAYHYSPLTSDVIKGLGADLNFKLGQPFRPYE 587
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+GV P S +P Y LMT+P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE
Sbjct: 588 QLMGVLPDRSKSIVPTVYWDLMTNPKSPIVDFYPRDFELDMNGKKMEWEAVVKIPFIDEK 647
Query: 688 RLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLLD + + L+++E RN + F
Sbjct: 648 RLLDAMGPVNEKLSDDEKSRNQFGVSLKFT 677
>gi|71024163|ref|XP_762311.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
gi|74698979|sp|Q4P149.3|XRN2_USTMA RecName: Full=5'-3' exoribonuclease 2
gi|46101835|gb|EAK87068.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
Length = 1233
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/446 (52%), Positives = 318/446 (71%), Gaps = 18/446 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-----VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V+ V EE+P G + +P+DTS PNPNG E+D LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEDPKTAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE +PAP T +E+ +F Y +R+ MVRPR+LL MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLP--PKSDSQVFDSNVITPGTEFMAVLSIA 173
SRRFRA+K+A + EE+ E++ +G K + +DSN ITPGT FM +L+ +
Sbjct: 121 SRRFRAAKEAREKHEEEQAALAEWKAKGLGATDDEKKSKRAWDSNAITPGTPFMDLLAAS 180
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y++ ++N+DPGW+ I+VI+SDA+VPGEGEHKIM ++R QR+ P +DPNT+H +YGLD
Sbjct: 181 LRYWVAQKINSDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 240
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML+LATHE +F +LRE VF + K C LCGQPGH AA+C G AK+K+G+ DE
Sbjct: 241 ADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGQHDE-- 298
Query: 293 DEVVVP----KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 348
+ P KKP+ FL + TLREYL+ E IP PF DLE +DD++F+ FFVGNDFL
Sbjct: 299 ---IAPTPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFL 355
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF-QK 407
PH+P+LEIR+GAI+ L+ ++KKE A+GGYLT+ + L R + + + S ED IF ++
Sbjct: 356 PHLPSLEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQLILSGLASEEDEIFRRR 415
Query: 408 RARLHQRHAERIKREKAQARRGDDVE 433
+ +R R +RE+ Q RR +++
Sbjct: 416 KEDEDRRETNRKRREEMQQRRDKELD 441
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 118/260 (45%), Positives = 164/260 (63%), Gaps = 12/260 (4%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED VK+ EPG++ERYY+EKF + + R+ VV Y EGLCWV+ YYY+GV SWQW+
Sbjct: 660 EDTVKMWEPGYRERYYKEKFGVDLSDT--DFRRSVVKSYIEGLCWVLAYYYQGVPSWQWY 717
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YP+H++PFA+D +DL+ +I F+LG PFKPF QL+GV P+ S ++P + LMT+ +S
Sbjct: 718 YPFHFSPFAADFEDLESLDIQFQLGSPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSD 777
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP++FE+DMNGK+ +WQG+A LPFIDE RLLD +K+ L+E+E RRN + L
Sbjct: 778 IIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALKERYPLLSEDEVRRNGFGNNTL 837
Query: 716 FV----LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP 771
FV L L IY + +RV V NP LS G+ G++ P
Sbjct: 838 FVGNESRLYDFLCEEIYAKKRTTDDGETPKRVAV----NPALSGGITGFVKPDPVCVPGS 893
Query: 772 VFRSPVAS--MEDIMGNQVL 789
F SP+ S + DI ++ +
Sbjct: 894 TFNSPLTSQALHDIHNDRSI 913
>gi|149041186|gb|EDL95119.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 915
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/376 (59%), Positives = 280/376 (74%), Gaps = 1/376 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++ + +EE+P +GVKIPVD SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+YIDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
ASK+ ++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD 180
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ + VILSDA+ PGEGEHKIM Y+R QR P +DPNT HCL G DADLIML
Sbjct: 181 RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG 240
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P + C LC Q GH +CEG + K G+ DE D + +
Sbjct: 241 LATHEPNFTIIRE-EFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 361 INLLMAVYKKEFRALG 376
I+ L+ +YK G
Sbjct: 360 IDRLVNIYKNVVHKTG 375
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 158/242 (65%), Gaps = 11/242 (4%)
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 581
L+ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 456 LKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 513
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 640
+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS +
Sbjct: 514 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNF 573
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 574 LPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 633
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
T EE RRNS+ +D+LFV HPL I L Q E V+V PEL G+ G
Sbjct: 634 TPEENRRNSLGSDVLFVGKVHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGK 685
Query: 761 IS 762
S
Sbjct: 686 FS 687
>gi|115437844|ref|XP_001217914.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
gi|114188729|gb|EAU30429.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
Length = 1413
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 295/748 (39%), Positives = 409/748 (54%), Gaps = 102/748 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAIAQGVEM------PKEDA--FDSNCITPGTEFMAKLTEQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 ISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q ++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLSMVREYLELEFQELEQEGALKFPFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---AR 410
L I EGA+ L+ +YK+ +GGY+ + +L R+ + + E R F+ AR
Sbjct: 302 LHINEGALALMFKIYKEILPKMGGYINEQGVINLERLGVLLDGLSDVEFRFFEAEYSDAR 361
Query: 411 LHQRHAERIKREKAQAR-RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 469
+ + + Q + +G V P AQ D V ++ +R P
Sbjct: 362 WIKAKKNGTETMELQEKPKGLTVTP-AQKDLFKDVKKYVLNRPGKAADTKP--------- 411
Query: 470 LDNGKGTSGRPHK-VPRLSSGATIGAAIVEAENS-------FETDP-----QENKEEFKA 516
LD R K V +L+ + V E+ F P +E EE
Sbjct: 412 LDFPSSLPARDRKFVEQLADDLRLPWTTVSDEHGERFIRLQFPEIPGDDSDEEEDEEASM 471
Query: 517 KLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEEREETRKD 569
++ ++R +A + E+ K E WK++YY KF+ E EE RK
Sbjct: 472 AVQRVIRKYDNAKVQEVSAEEAQKAAEKKYEEKFQEWKDKYYTSKFDWGL-ENAEEMRK- 529
Query: 570 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 629
+ Y +GL WV+ YYY G+ SW WF+ YHYAP SD+K + +++F LG PF+P+ QL
Sbjct: 530 LTENYVQGLQWVLFYYYRGIASWPWFFGYHYAPMISDVKKGLKADMNFRLGQPFRPYEQL 589
Query: 630 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+GV P S +P YR LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RL
Sbjct: 590 MGVLPDRSKKIVPPAYRDLMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRL 649
Query: 690 LDEVKKIEHTLTEEEARRNSIMADMLFV 717
LD +K EH LT +E RN A + F
Sbjct: 650 LDALKTREHLLTPDEKARNGFGASLKFT 677
>gi|320163497|gb|EFW40396.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1196
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/465 (50%), Positives = 311/465 (66%), Gaps = 13/465 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +R+L+ K+P +V E VI+G K+P+DTS+PNPN E+DNLYLDMNG+IH
Sbjct: 1 MGVPAMFRYLSNKFPKLVTPCAETPSTVINGTKVPIDTSRPNPNQQEFDNLYLDMNGLIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP DRP P + DE+ +F+YI+R+F +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPIDRPPPASEDEMMVLIFEYIERIFAIVRPRKLVYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A ++AA+SA + LR + E +G +LP K + FDSN ITPGTEFM L++ L+Y+IH
Sbjct: 121 AVREAAESATKLAELRAKLEADGVRLPQKKGHK-FDSNCITPGTEFMEQLAVCLRYFIHR 179
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+L DPGW+ IKVILSDANVPGEGEHKIM Y+R QR P YDPN +H +YG DADLIML
Sbjct: 180 KLMEDPGWQNIKVILSDANVPGEGEHKIMDYIRHQRAHPEYDPNIKHVMYGADADLIMLG 239
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE+ F+I+RE F P C +C Q GH + C G+A + PK
Sbjct: 240 LATHEISFTIIRE-EFVPNTPKPCSICNQMGHESTECRGEASVPDSTVEAA--PASGPKN 296
Query: 301 PYQFLHIWTLREYLDYEFRIPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ F+ I LREYL +E I PFE D+E +DD++FMCFFVGNDFLPH+P+LEIREG
Sbjct: 297 -FIFISIPILREYLSHELLISERLPFEFDIERAIDDWVFMCFFVGNDFLPHLPSLEIREG 355
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
A+ L+++Y++ ++GG++TD + + R ++ +G+ ED IFQ+R +R
Sbjct: 356 ALETLLSIYRRRLPSMGGFITDSGQVVVERALEILREIGTMEDSIFQRRHSEDERQKRNE 415
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 464
+R + +R + E P + S+L S SP Q++
Sbjct: 416 QRREQDRKRREQSERTWSPSMQL-------SQLGGPSSSSPAQRA 453
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 128/193 (66%), Gaps = 3/193 (1%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E GWKERYY+ KF+ + + R + Y EGLCWV+ YYY+GV SW+W+YPY
Sbjct: 626 VRLWEQGWKERYYQNKFHVSA--DDNDFRSKLAAAYLEGLCWVLQYYYQGVPSWKWYYPY 683
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASDL N F+ G PF+P QL+GV P+AS + +P+ + KLM+D SPI
Sbjct: 684 HYAPFASDLPAATNVNTKFDKGPRPFRPLEQLMGVLPAASGNFVPKTWAKLMSDDESPIL 743
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYPT+FEVDMNGK+ +W G+ LPFI+E RLLD +K + L EE RN + ++++V
Sbjct: 744 DFYPTEFEVDMNGKKAAWMGVVLLPFIEEKRLLDTLKTVYDDLRPEEVERNKLGYEVVYV 803
Query: 718 LLSHPLSASIYTL 730
H S+ T+
Sbjct: 804 GHKHAGFDSMCTI 816
>gi|299749174|ref|XP_001838563.2| exonuclease II [Coprinopsis cinerea okayama7#130]
gi|298408317|gb|EAU83256.2| exonuclease II [Coprinopsis cinerea okayama7#130]
Length = 1468
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 278/696 (39%), Positives = 375/696 (53%), Gaps = 84/696 (12%)
Query: 53 LDMNGIIHPCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAK 110
D NGIIH C HP D A E +F +F Y+D LF ++P+KL +MA+DGVAPRAK
Sbjct: 61 FDFNGIIHNCSHPNDEDAHFRLSEEQIFTSIFAYVDHLFEKIKPKKLFFMAVDGVAPRAK 120
Query: 111 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 170
MNQQRSRRFR +K+A + +R++ ER G KLP + + FDSN ITPGT FMA L
Sbjct: 121 MNQQRSRRFRTAKEAKE-------VREKAERRGEKLP---EEKAFDSNCITPGTPFMARL 170
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
S L+Y+I+ ++ D W ++V+LS VPGEGEHKIM Y+RL R P Y+PN RHCLY
Sbjct: 171 SAQLRYFINKKITEDSNWRSVEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNPNVRHCLY 230
Query: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
GLDADLIML L +H+ HF +LRE V K G +
Sbjct: 231 GLDADLIMLGLLSHDPHFCLLREEV----------------------------KFGPQRK 262
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFL 348
KG++ + Y LH+ +REYLD EFR PF +LE ++DDFI + FVGNDFL
Sbjct: 263 KGNQSLESTNFY-LLHLSLMREYLDLEFRDIEHVLPFPYNLERVIDDFILLAVFVGNDFL 321
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
P++P L I E + L VYKK L GY+ + +++R++ + + +E IF+K
Sbjct: 322 PNLPDLHIHENGLEKLFDVYKKALPGLNGYINESGTINVQRLQVVLDEMAVWEREIFEKE 381
Query: 409 AR----LHQRHAERIKREKAQARRG------------DDVEPLAQPDSLVP-VSRFHGSR 451
+ A +K + +R D V+ + P + F +R
Sbjct: 382 YADMNWFKGKQARHVKEMEMGRKRSKLVLTKRQREIFDKVKAFVLENRKAPSLEHFKAAR 441
Query: 452 LASGPSPSPYQQSECVGRLDNGKGTSGRPHK---------VPRLSSGATIGAAIVEAENS 502
L + P ++ + +L S R + R + + E
Sbjct: 442 LEM-VNDFPARERAFITQLSQDLHLSLRWDEYDEEDNNVVTWRFPRALEVSEDAEDEEGE 500
Query: 503 FETDPQENKEEFKAKLKELLR---------DKSDAFNSDNPEEDKVKLGEPGWKERYYEE 553
+E D QE++E A + L + D F++ K K+ E WK YY E
Sbjct: 501 WE-DMQEDEENVIAVDRVLNKYEKAPVEDPDAEGDFDARYERSIKEKMDE--WKRSYYRE 557
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
K + +E D+V RY EGL WVMHYYY GV SW WFY YHYAP SDL+++DQ
Sbjct: 558 KLEISYDDPKE--MGDLVYRYVEGLQWVMHYYYSGVASWGWFYNYHYAPRISDLRNVDQM 615
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
+FELG PFKP+ QL+GV P AS +P Y+ LM DPNSPI DFYP +FE D+NGK+
Sbjct: 616 TFNFELGKPFKPYEQLMGVLPVASKDHIPLAYQDLMYDPNSPILDFYPLEFESDLNGKKQ 675
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
W+ + K+PFIDE RLL + EH LT EE +RN+
Sbjct: 676 DWEAVVKIPFIDEERLLKAMASREHRLTPEERQRNT 711
>gi|343427909|emb|CBQ71434.1| related to dna exoribonuclease Dhp1p [Sporisorium reilianum SRZ2]
Length = 1251
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/443 (53%), Positives = 316/443 (71%), Gaps = 22/443 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-----VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V+ V EE+P G + +P+DTS PNPNG E+D LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEDPATAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE +PAP T +E+ +F Y +R+ MVRPR+LL MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS----QVFDSNVITPGTEFMAVLS 171
SRRFRA+K+A + E+E E++ +G LP D+ + +DSN ITPGT FM +L+
Sbjct: 121 SRRFRAAKEAREKHEEKEAALAEWKAKG--LPVTDDALQSKKAWDSNAITPGTPFMDLLA 178
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+L+Y++ ++N+DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR+ P +DPNT+H +YG
Sbjct: 179 ASLRYWVAQKINSDPGWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYG 238
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDE 290
LDADLIML+LATHE +F +LRE VF + K C LCGQPGH AA+C G AK+K+GE DE
Sbjct: 239 LDADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGEHDE 298
Query: 291 KGDEVVVP----KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 346
+ P KKP+ FL + TLREYL+ E IP PF DLE +DD++F+ FFVGND
Sbjct: 299 -----IAPTPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFVGND 353
Query: 347 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
FLPH+P+LEIR+GAI+ L+ ++KKE A+GGYLT+ + L R + + + S ED IF+
Sbjct: 354 FLPHLPSLEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQIILSGLASEEDDIFR 413
Query: 407 KRARLHQRHAERIK-REKAQARR 428
+R R K RE+ Q RR
Sbjct: 414 RRKEDEDRRENNKKRREEMQKRR 436
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 157/250 (62%), Gaps = 11/250 (4%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED VK+ EPG++ERYY+EKF + + R+ VV Y EGLCWV+ YYY+GV SWQW+
Sbjct: 648 EDTVKMWEPGYRERYYKEKFGVDLSDT--DFRRQVVKSYIEGLCWVLAYYYQGVPSWQWY 705
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YP+H++PFA+D +DL+ +I FELG PFKPF QL+GV P+ S ++P + LMT+ +S
Sbjct: 706 YPFHFSPFAADFEDLESLDIKFELGAPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSE 765
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP++FE+DMNGK+ +WQG+A LPFIDE RLLD + + L+++E RRN + L
Sbjct: 766 IIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALNEKYPLLSDDEVRRNGFGNNTL 825
Query: 716 FV----LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP 771
FV L L IY K+ + + +N L+ G+ GY+ P
Sbjct: 826 FVGSESRLYDFLCEEIY-----AKKPSTDDGTPKRIAVNSALTGGVTGYVKPDPVCVPGS 880
Query: 772 VFRSPVASME 781
F SP+ S +
Sbjct: 881 TFNSPLTSQD 890
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 286/737 (38%), Positives = 409/737 (55%), Gaps = 90/737 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+RW++E+YPL + +IE + +IP E+DNLYLDMNGI+H
Sbjct: 1 MGIPKFFRWMSERYPLC-SQLIEND-------RIP-----------EFDNLYLDMNGILH 41
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D + P +E++ +F+YI+ LF ++P+KLLYMA+DG APRAKMNQQRSRR
Sbjct: 42 NCTHKNDDHSSPPLPEEEMYIAIFNYIEHLFEKIKPKKLLYMAVDGCAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +KDA D+ R + ER G P + FDSN ITPGT FM +S L Y+I
Sbjct: 102 FRTAKDAHDA-------RLKAERNGEDFP----EEQFDSNCITPGTTFMERVSRQLYYFI 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H ++ ND W+ I+VI S + PGEGEHKIM Y+R Q+ P Y+PNTRHCLYGLDADLIM
Sbjct: 151 HKKVTNDSQWQNIEVIFSGHDCPGEGEHKIMEYIRTQKAQPSYNPNTRHCLYGLDADLIM 210
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L +H+ HF +LR EV F P ++ ++K A
Sbjct: 211 LGLLSHDPHFCLLREEVTFGPASRN-----------------RSKELA------------ 241
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + LH+ LREYL++EF+ F+ DLE I+DDFI + FFVGNDFLPH+P L
Sbjct: 242 -HQKFYLLHLSLLREYLEFEFQECRSTFTFKYDLEKILDDFILLAFFVGNDFLPHLPGLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I EGA+ L+ ++YKK + GGY+ + ++ R+E + + ++E IF+ + +
Sbjct: 301 INEGALALMFSIYKKVMPSAGGYINEKGVINMARLELILLELENFEKEIFKAEVSETKNN 360
Query: 416 AERIKRE----KAQARRGDDVEPLA--QPDSLVPVSRFHGSR---LASGPSPSPYQQSEC 466
K K +D++ + Q + + + +F SR + + S Q
Sbjct: 361 GNSDKPSFDFLKYITESTNDIKAMTGEQKNYFLQIKKFLSSREPFIDFSANISSVDQ-RF 419
Query: 467 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKEL----L 522
+ RL N S K+ ++ + + E + E + + ++E + L++ L
Sbjct: 420 LRRLCNDLHLSFS--KIIKVDGTHLLRITFRDLEFNDEDEDEIEQDEIERVLQKYDNIPL 477
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 582
++ A N E+D ++ WK+ YY K + EE K + RY EGL WV+
Sbjct: 478 LNEEQALKEKNVEKDFIQ-----WKDDYYRSKVGFSYYD--EEALKAMAERYVEGLQWVL 530
Query: 583 HYYYEGVCSWQWFYPYHYAPFASD-LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHAL 641
YYY G SW W+Y YH+AP SD LK LD I F++G PF+PF QL+ V P+ S +
Sbjct: 531 FYYYRGCQSWGWYYNYHFAPKISDVLKGLD-VKIDFKMGTPFRPFEQLMAVLPARSQALV 589
Query: 642 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 701
P +R LM + SPI DFYP +F +D NGK SW+ + +PFIDE RL+D + + LT
Sbjct: 590 PPCFRDLMVNSESPIIDFYPENFALDQNGKTASWEAVVIIPFIDETRLIDALASKDKFLT 649
Query: 702 EEEARRNSIMADMLFVL 718
EEE +RNS A +F L
Sbjct: 650 EEERKRNSFNAPTVFSL 666
>gi|121718863|ref|XP_001276218.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
gi|119404416|gb|EAW14792.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
Length = 1408
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 291/747 (38%), Positives = 411/747 (55%), Gaps = 99/747 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAEN--------RIP-----------EFDALYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAIAQGIEM------PKEDA--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ D W+ ++++LS VPGEGEHKIM Y+R + P YD N RHCLYGLDADLI
Sbjct: 151 ISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPDYDSNIRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q ++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FFLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-----KR 408
L I EGA+ L+ +YK+ +GGY+ +G +L+R+ ++A+ E R F+ +
Sbjct: 302 LHINEGALALMFKIYKEVLPKMGGYVNEGGVINLKRLGMLVEALSDVEFRFFEVEYSDAK 361
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRF--------HGSRLASGPSPSP 460
+R A E + +RG V P AQ + V ++ GS+ PS P
Sbjct: 362 WITAKRKAIENDFEPPEKQRGLTVTP-AQKELFKEVKKYVLNRPEKETGSKPLDLPSALP 420
Query: 461 YQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE---NSFETDPQENKEEFKAK 517
+ + V +L N VP + G + + N + +E EE
Sbjct: 421 ARDRKFVEQLAND-------LHVPWTTVADEHGDRFIRLQLPTNDDDDSEEEEDEEASMA 473
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEEREETRKDV 570
++ ++R +A + E+ K E WK++YY KF + EE RK +
Sbjct: 474 VRRVIRRYENAKVQEISPEEAQKAAEQKYEEKFQEWKDKYYMSKFGWGL-DNHEEMRK-L 531
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV++YYY G+ SW WF+ YHYAP SD+ + +++F+LG PFKP+ QL+
Sbjct: 532 TENYVQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVTKGLKADMNFQLGQPFKPYEQLM 591
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P YR LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E RLL
Sbjct: 592 GVLPDRSKKIVPAAYRDLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEERRLL 651
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFV 717
D + H LT EE RN + F
Sbjct: 652 DALATKSHLLTPEEKVRNDFGVSLKFT 678
>gi|389635811|ref|XP_003715558.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|351647891|gb|EHA55751.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|440470232|gb|ELQ39313.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae Y34]
gi|440485056|gb|ELQ65052.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae P131]
Length = 1435
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 285/747 (38%), Positives = 406/747 (54%), Gaps = 96/747 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPE--DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + D + DE+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTHDTSFRLSEDEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E R + REG++LP + + FDSN ITPGTEFMA LS L+Y++
Sbjct: 102 FRTALDA-------EVARDKAVREGQELPKE---EPFDSNCITPGTEFMAKLSEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLYGLDADLIM
Sbjct: 152 NKKVSEDTEWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYNHNVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q +K ++ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQ-------------------SKSQSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ LH+ +REYL+ EF + F D+E ++DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLLHLCIVREYLELEFQDLKKDGRMTFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
I EGA+ L+ +YK+ GY+ +G + +L+R+ ++ +G E R F+
Sbjct: 303 HINEGALALMFRLYKEILPKCDGYINEGGRVNLQRLGLLLEGLGEAERRFFEV-----DM 357
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
E R K Q + ++P + V+ + P ++S+ L G
Sbjct: 358 QNEHWFRSKQQMENSEAAPVKSRPKGQLQVTTSQKNLWKHKIKPFITKRSQTPLNLGTGL 417
Query: 475 GTSGRPHKVPRLSSGATIGAAIVEAEN------SFETDPQEN----------KEEFKAKL 518
+ R S +V+ E SF P + +E A
Sbjct: 418 NAADRKFAQEIADSFRLTYETLVDDEGNRAIVLSFPKLPDASGNDDDDDGFEEEGDAAAH 477
Query: 519 KELLRDKSDAFNSDNPEEDKV--------KLGEPGWKERYYEEKFNAKTPEEREETRKDV 570
+E+L+ A +PEE K K E WK++YY EKF T E +E+ +++
Sbjct: 478 REMLKYDRAAVVDTSPEEAKAAMEVLYQQKFQE--WKDKYYSEKFEW-TAETKEQGLREL 534
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV++YYY G+ SW WFY +HY+P SD+ +++F LG PFKP+ QL+
Sbjct: 535 AENYVQGLQWVLYYYYRGIRSWPWFYKFHYSPMISDVMKGLNADMNFTLGQPFKPYEQLM 594
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P Y +LMTDPNSPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 595 GVLPDRSKKIVPTVYWELMTDPNSPIIDFYPRDFELDMNGKKQEWEAVVKIPFIDEKRLL 654
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFV 717
D + H L++ E RN + F
Sbjct: 655 DGMATKNHLLSDVEKSRNGFGVALKFT 681
>gi|324500092|gb|ADY40054.1| 5'-3' exoribonuclease 1 [Ascaris suum]
Length = 1700
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 283/734 (38%), Positives = 391/734 (53%), Gaps = 91/734 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP + V+ +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYPCLSE--------VVTHKQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F+ +F+YID LF ++ P+++ +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 GCTHPNDEDISFRISEEQIFRDIFNYIDTLFSIIEPKRVFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F ++K+A + E QE +E R FD N ITPGTEFMA L LQY+I
Sbjct: 102 FMSAKNAELALKIAESKGQEIPKEKR----------FDPNCITPGTEFMARLHEQLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++++ D W+ I+V LS N PGEGEHKIM ++R +R+ P YD NTRHCLYGLDADLIM
Sbjct: 152 KMKISTDTAWQGIRVYLSGHNCPGEGEHKIMDFIRSERSQPDYDANTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+P K K + G + +
Sbjct: 212 LGLCSHEPHFSLLREEV----------KFGRP----------PKHKHKSTPKTGVDGIT- 250
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ LH+ LREYL +EFR F D+E ++DD++ M F VGNDF+PH+P + I
Sbjct: 251 ---FHLLHLSLLREYLSWEFRPIQDKLSFPYDMESVIDDWVLMGFLVGNDFIPHLPHVHI 307
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-------- 408
E A+ L + Y + L GYL + +L+R E F++A + + F +R
Sbjct: 308 HEDALPALYSTYVQVLPQLDGYLNEAGILNLKRFEKFLKAFSKIDRQSFMQRMEDEDYLA 367
Query: 409 ARLHQRHAERIKREKAQ--ARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 466
++ Q ++R +EKA+ DD E QP + S +G S +++
Sbjct: 368 SKRTQPSSKREPKEKAKVIGPHDDDEEEELQP--------YSDSESENGDEESS-EENVH 418
Query: 467 VGRLDNGKGTSGRPHKVPR---LSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 523
G D+ P P S+ + I E+ E P L ++
Sbjct: 419 RGAFDSDSENEDLPEVEPTPEVPSAWELLKDGIPPLEDESEERP----------LVGIID 468
Query: 524 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 583
+++ + D V K YY +K N K +EE R+ Y + W +H
Sbjct: 469 EENYENDCDVVWTHSVNRAFKDHKRNYYNDKMNYKNI-SKEELREQAE-GYIRAIQWNLH 526
Query: 584 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 643
YYY G CSW WFYP+HYAP+ SD+ D I+FEL PF PF QL+ V P+AS+ LP
Sbjct: 527 YYYHGCCSWNWFYPHHYAPYISDVTDFADMEINFELSAPFHPFEQLMAVLPAASADCLPV 586
Query: 644 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 703
++LM D +SPI +FYP DFE D+NGK+ W+ + +PFI+E RLLD + E LT+E
Sbjct: 587 PLQELMFDESSPILEFYPRDFETDLNGKKNDWEAVVLIPFINEKRLLDAIASKEARLTDE 646
Query: 704 EARRNSIMADMLFV 717
E RRNS +LF
Sbjct: 647 ERRRNSHGPHLLFT 660
>gi|321259283|ref|XP_003194362.1| 5'-3' exonuclease involved in mRNA decay; Kem1p [Cryptococcus
gattii WM276]
gi|317460833|gb|ADV22575.1| 5'-3' exonuclease involved in mRNA decay, putative; Kem1p
[Cryptococcus gattii WM276]
Length = 1456
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 285/751 (37%), Positives = 387/751 (51%), Gaps = 112/751 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGL-EYDNLYLDMNGII 59
MG+P F+RW++E+YPL + PN + +DNLYLDMNGII
Sbjct: 1 MGIPKFFRWISERYPLTSQLI--------------------TPNSIPTFDNLYLDMNGII 40
Query: 60 HPCFHP---EDRPA-PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
H C HP E+ P T +++ +F YID LF ++P+K+ +MAIDGVAPRAKMNQQR
Sbjct: 41 HNCSHPPSSENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQR 100
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
SRRFRA KDA D R++ E+ G KLP D + FDSN ITPGT FMA LS L+
Sbjct: 101 SRRFRAGKDARDQ-------REKAEKNGEKLP---DEKAFDSNAITPGTPFMARLSQHLK 150
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YY+ R++ D W I+VILS +VPGEGEHKI ++RL + P Y+PNTRHCLYGLDAD
Sbjct: 151 YYVRKRISEDADWRNIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLYGLDAD 210
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML L +H+ HF +LRE V G+ R+ E
Sbjct: 211 LIMLGLLSHDPHFCLLREEV---------------------TFGRKSRQNTELANTN--- 246
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYLD EF FE DLE I+DDFI M FVGNDFLPH+P
Sbjct: 247 ------FFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFLPHLPD 300
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ----KRA 409
L I EGA+ + +YK + GYL + SL R++ + + +E + F+ +
Sbjct: 301 LHINEGALERIWGMYKDILPTIDGYLNEHGTISLPRLQLLLDKLAEFEVKRFEDDLVDQV 360
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGR 469
H + + ++G V Q L + F + P+P + E +
Sbjct: 361 HFSGNHTKDTMVIEKARKKGRKVITKYQQKVLNQLRSFIEKQQN---QPNPTHRLELINT 417
Query: 470 LDNGKGT-----SGRPHKVPRLSSGATIGAAIV------------------EAENSFETD 506
D + H G +++ E + +E+D
Sbjct: 418 QDKRDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGNEEDEDWESD 477
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYEEKF--NA 557
E +E K ++ + R+ S A D ED K+K G K +YY +K N
Sbjct: 478 GME--DEGKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDGIKRQYYHDKLEINY 535
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 617
P + + D+V Y EGL W+++YYY+GV SW WFY YHY+P +DLK + F
Sbjct: 536 NDPAQMQ----DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVADMKFEF 591
Query: 618 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 677
+ G PF PF QL+GV P S +P YR LM + SPI DFYP +FE+DMNGK+ W+
Sbjct: 592 DYGKPFTPFQQLMGVLPVDSMEHVPLAYRDLMYEETSPIIDFYPRNFELDMNGKKQDWEA 651
Query: 678 IAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+ K+PFID+ RLL + + LT EE RN
Sbjct: 652 VVKIPFIDQNRLLKAMAARDVRLTPEERERN 682
>gi|406601833|emb|CCH46556.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 1519
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 282/753 (37%), Positives = 409/753 (54%), Gaps = 106/753 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL+ +IDG +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLISQ--------LIDGNQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C P+D +EVF +F YID LF ++P+++ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 TCTRPKDEDVTKRLSEEEVFSAIFAYIDHLFDTIKPKEVFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L + +EG ++P + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAVDA------EKNLEKAI-KEGTEIPK---DEPFDSNSITPGTEFMAKLTRYLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ D W+ +++ILS VPGEGEHKIM ++R ++ Y+PN RHC+YGLDADLIM
Sbjct: 152 HKKVSTDSRWQNVQIILSGHEVPGEGEHKIMEFIRTKKASKDYNPNLRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HF++LRE V T G++ QP V
Sbjct: 212 LGLVSHEPHFALLREEV-TFGRRQT-----QPK------------------------TVE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
++ + LH+ +REYL+ EF+ F+ D E ++DDFI + + +GNDFLP++P L +
Sbjct: 242 EQKFYLLHLSLVREYLELEFQDLKETISFDYDFERVLDDFILIMYVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQ 413
+GA LL+ +K+ R L GY+ + K +L+R+ ++ + +E F++
Sbjct: 302 NKGAFPLLIETFKEALRNLDGYINEFGKINLKRLGSWLDILSKFEVENFEQVEVDLEWFN 361
Query: 414 RHAERIKR--EKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC----- 466
+ E I EK + R+G + + Q LV + + + S P + +
Sbjct: 362 KQLENISLTGEKKRQRQG-KLLIMKQQKKLVGIIKPWLIKTVSVKPNGPVEDEQIPSINL 420
Query: 467 -VGRLDNGKGTSGRPHKVPRLSSGA-TIGAAIVEA--ENSFET-------DPQENKEEFK 515
V ++N + L A G I+ + EN++ DP E +EEF
Sbjct: 421 PVDVVENN---------LDFLKDFAFDTGLIIIHSKNENTYSVKLDIDGIDPHETEEEFN 471
Query: 516 AKLKELLRDKS--------DAFNSDNPEEDKVKLGEP--GWKERYYEEKFNAKTPEEREE 565
++ + R DA D EE +V E WK+ YY+EK + E+
Sbjct: 472 ERVNDTRRIIKRYEAAIILDAEGEDVAEERQVIYNEKFENWKDNYYKEKLEFSIKD--ED 529
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 625
+++ Y EGL WV+ YYY+GV SW W+Y YHYAP SD+K I+ E G PF+P
Sbjct: 530 KLRELTENYVEGLQWVLFYYYKGVQSWPWYYRYHYAPRISDIKKGLDVIINLEKGTPFRP 589
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
F QL+ V P+ S +P YR LMT+PNSPI DFYP+D E DMNGK W+ + KL F+D
Sbjct: 590 FEQLMAVLPARSRQLVPAVYRPLMTEPNSPIIDFYPSDVETDMNGKTAEWEAVVKLSFVD 649
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
RL D +K LT EE +RNS +D+LF
Sbjct: 650 PDRLKDAMKPHNAELTPEEKQRNSFGSDILFTF 682
>gi|440639205|gb|ELR09124.1| hypothetical protein GMDG_03704 [Geomyces destructans 20631-21]
Length = 1005
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/431 (52%), Positives = 297/431 (68%), Gaps = 8/431 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+PA ++WL+ KYP +++ VIE+ +D V IPVD ++PNPNG E+DNLYLDMNGI+H
Sbjct: 1 MGIPAAFKWLSTKYPKILSPVIEDHRKDVDNVAIPVDATQPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP P +E+ +F Y +R+F MVRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPPPANEEEMMLEIFKYTERVFNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-----VFDSNVITPGTEFMAVLSIALQ 175
++++A + ++ L + + +S S+ +DSN ITPGT FM +L+ +L+
Sbjct: 121 SAQEAKEKDEDKAELLKMLRSQAGGQVEESTSEAMVTKTWDSNAITPGTPFMDILAASLR 180
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y+ +LN DP W K+KVILSDA VPGEGEHKIM ++R QR+ P +DPNTRH +YGLDAD
Sbjct: 181 YWTAYKLNTDPAWAKVKVILSDATVPGEGEHKIMQFIRSQRSSPDHDPNTRHVIYGLDAD 240
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML LATHE HF +LRE V F + C LC Q GH A C G+AK K GEFDEK +
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQDSKGRTCRLCNQKGHEARECRGQAKEKDGEFDEK--D 298
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
V P KP+ +LH+ LREYL+ E +PN PF DLE +DD++FMCFFVGNDFLPH+P+L
Sbjct: 299 SVQPLKPFIWLHVSVLREYLEAELYVPNQPFRFDLERAIDDWVFMCFFVGNDFLPHLPSL 358
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
EIRE I+ LMA+++ +GGY+T L R + + + ED IF++R + +R
Sbjct: 359 EIRENGIDTLMAIWRDNIPHMGGYVTKDGHVDLERAQFILDGLAKQEDAIFRRRRQTEER 418
Query: 415 HAERIKREKAQ 425
KR K Q
Sbjct: 419 RDANAKRRKLQ 429
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 141/225 (62%), Gaps = 7/225 (3%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D V+L E G+ +RYYE+KF K E R V Y EGL WV+ YY++G SW+W+Y
Sbjct: 579 DNVRLWEDGYADRYYEQKF--KVDPRDTEFRHKVAKAYVEGLAWVLLYYFQGCPSWEWYY 636
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYHYAPFA+D L I FE G FKPF QL+GV P+AS H +P+ + LMT+ +S I
Sbjct: 637 PYHYAPFAADFVGLADMKIGFEKGRIFKPFEQLMGVMPAASRHTIPDVFHDLMTNEDSEI 696
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
+FYP DF +D+NGK+++WQG+A LPFID RLL +++ L E A RN++ D+L
Sbjct: 697 IEFYPPDFPIDLNGKKFAWQGVALLPFIDAKRLLAAMEQRYPLLPPEVAARNTVGNDVLL 756
Query: 717 VLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
V +H S+Y D+ K++ + +LNP +SDG+ G +
Sbjct: 757 VSEAH---QSLY--DDIATHFYSKKQGSPQYQLNPRISDGLAGKV 796
>gi|328865681|gb|EGG14067.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1157
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 312/842 (37%), Positives = 441/842 (52%), Gaps = 114/842 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+PAF+RWL +KY V+ +EP DG ++ D S+ N NG E+DNLYLDMNGIIH
Sbjct: 1 MGIPAFFRWLVDKYGNVITPT--KEPRDSDGSRLKCDFSELNVNG-EFDNLYLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P ++ + +Y+D LF ++RPRKL+YMAIDGVAPRAKMNQQR+RRFR
Sbjct: 58 PCAHPEKGPKPRNTQDMMDSIVEYLDLLFAIIRPRKLIYMAIDGVAPRAKMNQQRARRFR 117
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV----------FDSNVITPGTEFMAVL 170
A+ D+ +E+ R ER + D FDSN ITPGTEFMA++
Sbjct: 118 AALDS--RITKEQAARDLIERLNNGSLSQEDYDAIQKDGAEKYHFDSNCITPGTEFMALV 175
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
++ L+ Y+ +++ DP W+ +KVI+SDA+VPGEGEHKIM Y+R QR+ P Y+PN +H +Y
Sbjct: 176 ALTLRQYVAEKISTDPAWKDVKVIISDASVPGEGEHKIMEYIRHQRSQPDYNPNLKHVMY 235
Query: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
GLDADLIMLAL+THEV+F ILRE + P K G P + K + DE
Sbjct: 236 GLDADLIMLALSTHEVNFDILREFIAPP----KGNRFGTPAPTPS--------KDVDEDE 283
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
D +V K YQ L++ LREYLD E + NPPFE ++E I+DDFIF+CFFVGNDFLPH
Sbjct: 284 VKDFLV---KDYQLLNLAILREYLDTELKC-NPPFEYNVERIIDDFIFICFFVGNDFLPH 339
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+L+I EGAI+ LM +YK+ GYLTD + L R+ + E+ I +R +
Sbjct: 340 LPSLQINEGAIDRLMRIYKELLPTFEGYLTDNGEIDLDRLRKVFVRLSREEEDILLRRKK 399
Query: 411 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 470
+R A+ Q R D + VS H AS S +Q
Sbjct: 400 KEERFAQGRNNRFQQTARTDITGTASSQQLNTQVSERHKQAAASILS-DIFQPVAADTEE 458
Query: 471 DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKE---LLRDKSD 527
+N P K + + AA EN + + K++ A +E LL+ K
Sbjct: 459 NN-------PKKKVKTDHLSNKDAAQQLRENLAKATSKGTKDQLDATNREAAALLQQKMS 511
Query: 528 AFN-----------SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY-- 574
+N PE + K +++ E +A ++ +K + +
Sbjct: 512 KYNEKKRVVKVIDIQQTPEAAETKDDNTKKRKKKETEDKSAAEDQDDSLEKKLFIHKMKD 571
Query: 575 ----TEGLCWVMHYY-------------YEGVC-------SWQWFYPYH----------- 599
+EG W YY +C +W Y +H
Sbjct: 572 VNIGSEG--WRTRYYEHHFETEQPQNELVRAICQSYVDGLAWVLRYYFHGCCSWGWYYPY 629
Query: 600 -YAPFASDLKDLDQFNI--SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM------T 650
YAPF DL + + FELG PF+PF QL+ V P AS +P+ YR +M
Sbjct: 630 HYAPFILDLAENGSMIVEPQFELGAPFRPFQQLMSVLPKASGQFVPKPYRTMMGISIDGE 689
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
D N I FYP +F +D+ + +W+G+ +LPFIDE LL +K ++++LTE+EA RNS
Sbjct: 690 DRNDVILHFYPNEFLIDVAPGQPTWKGVCQLPFIDENELLSALKPLDNSLTEDEAFRNSH 749
Query: 711 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERV---------EVKERLNPELSDGMNGYI 761
D+ ++SH S SI + + + L+ +++ V++RL P LS + Y
Sbjct: 750 GTDL---IISHN-STSIGSTTDLPRNLEKPDQILGTISPVIPGVEKRLPPLLSAKVFTYK 805
Query: 762 SP 763
+P
Sbjct: 806 NP 807
>gi|388857586|emb|CCF48735.1| related to dna exoribonuclease Dhp1p [Ustilago hordei]
Length = 1245
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/437 (52%), Positives = 309/437 (70%), Gaps = 10/437 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-----VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V V E++P G + +P+DTS PNPNG E+D LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVTSVQEQDPKTAPGPDGSEIVLPLDTSTPNPNGEEFDCLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE +PAP + +E+ +F Y +R+ MVRPR+LL MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPESEEEMMIEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS--DSQVFDSNVITPGTEFMAVLSIA 173
SRRFRA+K+A + E E E++ +G + + + +DSN ITPGT FM +L+ +
Sbjct: 121 SRRFRAAKEAREKHQENESALAEWKAKGLPITDHALQSKKAWDSNAITPGTPFMDLLAAS 180
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y++ ++N DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR+ P +DPNT+H +YGLD
Sbjct: 181 LRYWVAQKINTDPGWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 240
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML+LATHE +F +LRE VF + K C +CGQPGH AA+C+G K K+GE DEK
Sbjct: 241 ADLIMLSLATHEPYFKVLREDVFASDNKPKTCNICGQPGHFAASCKGSPKNKSGEHDEKA 300
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ KKP+ FL + TLREYL E IP PF DLE +DD++F+ FFVGNDFLPH+P
Sbjct: 301 -QTPPDKKPFIFLDLPTLREYLQVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLP 359
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
+LEIR+GAI+ L+ ++KKE ++GGYLT+ K L R + + + S ED IF++R
Sbjct: 360 SLEIRDGAIDTLLRIWKKELPSMGGYLTNHGKVELSRAQLILNGLASEEDDIFRRRKEDE 419
Query: 413 QRHAERIKREKA-QARR 428
R KR +A Q RR
Sbjct: 420 DRRENNKKRREAIQQRR 436
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/254 (45%), Positives = 163/254 (64%), Gaps = 14/254 (5%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+D VK+ EPG++ERYY EKF + + R+ VV Y EGL WV+ YYY+GV SWQW+
Sbjct: 640 QDTVKMWEPGYRERYYREKFGVDLSDT--DFRRQVVKSYIEGLSWVLAYYYQGVPSWQWY 697
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YP+H++PFA+D +DL +I FELG PFKPF QL+GV P+ S ++PE + LMT+ +S
Sbjct: 698 YPFHFSPFAADFEDLASLDIKFELGAPFKPFEQLMGVLPADSRASIPEPFHPLMTESDSE 757
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP++FE+DMNGK+ +WQG+A LPFIDE RLLD +K L+E+E RRN + L
Sbjct: 758 IIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALKDKYPLLSEDEVRRNGFGNNTL 817
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKER----LNPELSDGMNGYISPCAGDPHPP 771
FV L D C+++ K+ + +++ +NP L+ G+ GY+ P
Sbjct: 818 FVGNESRL------YDFLCEEIYSKKASDEEKKKAIPINPALTRGITGYVKPDPVCVPGS 871
Query: 772 VFRSPVAS--MEDI 783
F SP+ S ++DI
Sbjct: 872 TFNSPLTSQNLQDI 885
>gi|340959829|gb|EGS21010.1| 5'-3' exoribonuclease 1-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1461
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 288/743 (38%), Positives = 406/743 (54%), Gaps = 94/743 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPE--DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + D T +E+F +F+YI+ LF ++P+KL +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDVDDVHFRLTEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA ER R++ REG++LP + FDSN ITPGTEFMA LS+ L+Y+I
Sbjct: 102 FRTALDA-------ERAREKALREGKELP---KEEPFDSNCITPGTEFMAKLSLQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ +++LS VPGEGEHKIM Y+R R P Y+PNTRHCLYGLDADLIM
Sbjct: 152 NKKVSEDRDWQGPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYNPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q AK K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQ-------------------AKHKSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFR-IPNP---PFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ LH+ +REYL+ EF+ + P PF D+E ++DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLLHLCIVREYLELEFQELKEPGAIPFPFDMERVIDDFILMAFFVGNDFLPNLPRL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---ARL 411
I EGA+ L+ +YKK GY+ + K +L R++ ++ + E R F++ +
Sbjct: 303 HINEGALALMFKIYKKVLPKCDGYINENGKVNLDRLKILLEELEQEEYRFFEQEHEDTKW 362
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
Q E QA+ + + P + L + SP+ LD
Sbjct: 363 LQGKKMLENNEAEQAKAKAKGKLIISPSQKALWKQKIRKWLLNSTSPT----------LD 412
Query: 472 NGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFE---------TDPQENKEEFKAKLKEL 521
G + K V L+ A I A ++ + E EE A L +
Sbjct: 413 LGADLNAADRKFVEDLAEAAHIEWATKPDDDGIRHLVLSRPVMDEDDEEDEEAHAALYRI 472
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYE-------EKFNAKTPEEREETRKDVVLRY 574
+ +A D E+ + +K+++ E K + TP+ E+ K + Y
Sbjct: 473 AKRYDNAQVLDLSSEEAKAAVQEKYKQKFQEWKDKYYLSKMDGWTPQNLEQELKKMAENY 532
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
+GL WV++YYY G+ SW WFY YHYAP SD+ +++F+LG PF+P QL+GV P
Sbjct: 533 VQGLQWVLYYYYRGIASWPWFYGYHYAPMISDVVKGLGADLNFKLGQPFRPNEQLMGVLP 592
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
S +P+ Y LMTDPNSPI DFYP +FE+D+NGK+ W+ + K+PFIDE RLL+ +
Sbjct: 593 DRSKKIVPKVYWDLMTDPNSPIIDFYPREFELDLNGKKMDWEAVVKIPFIDEKRLLEAMA 652
Query: 695 KIEHTLTEEEARRNSIMADMLFV 717
LTEEE RN + F
Sbjct: 653 PRNALLTEEEKARNEFGVPLKFT 675
>gi|326480075|gb|EGE04085.1| 5'-3' exoribonuclease [Trichophyton equinum CBS 127.97]
Length = 1424
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 289/746 (38%), Positives = 409/746 (54%), Gaps = 98/746 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E ++ +EG ++P K D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA-------ELAKERAIKEGVEMP-KEDA--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPN----PPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK+ LGGY+ + ++ R+ + A+ E R F+
Sbjct: 302 LHINEGALAWMFKVYKEILPKLGGYVNEHGTINMGRLRTLLAALSDVEFRFFEA------ 355
Query: 414 RHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRL 470
+ K++ GD L +P+ ++ P + +R+ + P ++ L
Sbjct: 356 -EYSDARWLKSKTLDGDQTPTLPEKPNVLTITPAQKHIFNRIKKYVTHRPMDEAGQPIPL 414
Query: 471 DNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQENKEEFKAK 517
D R K V +L+ + + V + N + D ++ +E +
Sbjct: 415 DLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPANDDDDDEDDDDDESQIA 474
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGW-------KERYYEEKFNAKTPEEREETRKDV 570
+ +L+ +A D ED E + K++YY+ KF E EE RK +
Sbjct: 475 ILRVLKKYENAKVKDVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENAEEMRK-L 532
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF PF QL+
Sbjct: 533 TENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPFFPFQQLM 592
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 593 GVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEERLL 652
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLF 716
+ EH LT EE RNS + F
Sbjct: 653 KAMATKEHLLTPEEKARNSFGVTLKF 678
>gi|326468946|gb|EGD92955.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 1424
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 288/746 (38%), Positives = 407/746 (54%), Gaps = 98/746 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E ++ +EG ++P K D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA-------ELAKERAIKEGVEMP-KEDA--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPN----PPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK+ LGGY+ + ++ R+ + A+ E R F+
Sbjct: 302 LHINEGALAWMFKVYKEILPKLGGYVNEHGTINMGRLRTLLAALSDVEFRFFEA------ 355
Query: 414 RHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRL 470
+ K++ GD L +P+ ++ P + +R+ + P ++ L
Sbjct: 356 -EYSDARWLKSKTLDGDQTPTLPEKPNVLTITPAQKHIFNRIKKYVTHRPMDEAGQPIPL 414
Query: 471 DNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQENKEEFKAK 517
D R K V +L+ + + V + N + D ++ +E +
Sbjct: 415 DLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPANDDDDDEDDDDDESQIA 474
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGW-------KERYYEEKFNAKTPEEREETRKDV 570
+ +L+ +A D ED E + K++YY+ KF E EE RK +
Sbjct: 475 ILRVLKKYENAKVKDVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENAEEMRK-L 532
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF PF QL+
Sbjct: 533 TENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPFFPFQQLM 592
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 593 GVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEERLL 652
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLF 716
+ EH LT EE RNS + F
Sbjct: 653 KAMATKEHLLTPEEKARNSFGVTLKF 678
>gi|452983794|gb|EME83552.1| hypothetical protein MYCFIDRAFT_196796 [Pseudocercospora fijiensis
CIRAD86]
Length = 823
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/441 (52%), Positives = 301/441 (68%), Gaps = 24/441 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI---DG--VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +++ V+EE+P I DG KIP+D PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIISPVVEEQPGEIANEDGSVTKIPIDARGPNPNGEEMDNLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPEDRP P +E+ +F+Y +R+ MVRPRKLL +A+DGVAPRAKMNQQR
Sbjct: 61 NGIVHPCSHPEDRPPPANEEEMMVAIFEYTERVVNMVRPRKLLMIAVDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAA--DSAAEE--ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
SRRFR++++AA D+ A E R+ E G + +DSN ITPGT FM +L+
Sbjct: 121 SRRFRSAQEAAEKDAMAAEFHARMVAAGEAGGDDEKNSKPKKTWDSNSITPGTPFMDLLA 180
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+L+Y+I +L DP WEK+KVI+SDA VPGEGEHKIM++VR QR+ P +DPNTRH +YG
Sbjct: 181 ASLRYWISYKLTTDPAWEKLKVIISDATVPGEGEHKIMNFVRSQRSSPDHDPNTRHVIYG 240
Query: 232 LDADLIMLALATHEVHFSILREVVFT----PGQQDKCFLCGQPGHLAANCEGKAKRKAGE 287
LDADLIML LATHE HF +LRE VF PG C C QPGH+AANC GK K +
Sbjct: 241 LDADLIMLGLATHEPHFRVLREDVFANDTKPGH---CRKCNQPGHIAANCTGKPKEE--- 294
Query: 288 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 347
++VV P KP+ +LH+ LREYL E +PN F DLE +DD++FMCFFVGNDF
Sbjct: 295 -----EDVVKPLKPFIWLHVGILREYLAVEMCVPNQGFRFDLERALDDWVFMCFFVGNDF 349
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
LPH+P+L+IRE I+ L+A+++ +GGY+T L R + ++ + ED IF++
Sbjct: 350 LPHLPSLDIREDGIDTLIAIWRDNLPLMGGYVTKDGHVDLARAQMILEGLAKQEDAIFKR 409
Query: 408 RARLHQRHAERIKREKAQARR 428
R + AER K+ + + RR
Sbjct: 410 RRETEVKAAERQKQREDRERR 430
>gi|116199173|ref|XP_001225398.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
gi|88179021|gb|EAQ86489.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
Length = 1420
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/756 (36%), Positives = 407/756 (53%), Gaps = 120/756 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H +D + +E+F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDVQFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +A E E+ R + +EG++LP + + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FR-------TALEAEKARDKAIKEGKELPKE---EPFDSNCITPGTEFMAKLTQQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W++ +++LS VPGEGEHKIM Y+R R P Y+PN RHCLYGLDADLIM
Sbjct: 152 NKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPEYNPNVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q AK K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQ-------------------AKHKSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ +H+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLMHLCIVREYLELEFQDLKKEGAMSFPFDMEKVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
I EGA+ + +YK GY+ + K +L+R+ + +G E R F+ H+
Sbjct: 303 HINEGALATMFRIYKSVLPKCDGYINENGKVNLQRLSRLLDELGKEEYRFFE-----HEN 357
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
E R K + D+ E L ++ G + S + ++++ + + +
Sbjct: 358 EDESWLRGK-RMLENDETEKLR--------AKAKGKLIVSSEQKALWKRT--IRKFLTNR 406
Query: 475 GTSGRPHKVPRLSSGATIGAA-------IVEAEN-SFETDPQENKEEF------------ 514
G+ L GA + AA + EA + + T P +
Sbjct: 407 GSR-------TLDLGAGLNAADRKFVQDLAEAAHLEWATKPDDEGHRHLILSYPAGDEED 459
Query: 515 ------KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKER-------YYEEKFNAKTPE 561
++ + +++ +A D D E +KE+ YY++KF TP+
Sbjct: 460 EEDEEAQSAVLRIVKRYDNAQTLDLTSADAQAAMEAKYKEKFQEWKDEYYDQKFEDWTPD 519
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
REE + + Y +GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG
Sbjct: 520 NREEELRKLTENYVQGLQWVLYYYYRGIASWPWFYAYHYSPMISDVVKGLNADLNFKLGQ 579
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
PF+P QL+GV P S +P+ Y +LMTDP SPI DFYP DFE+DMNGK+ W+ + K+
Sbjct: 580 PFRPNEQLMGVLPDRSKKIVPKVYWELMTDPKSPIIDFYPRDFELDMNGKKMDWEAVIKI 639
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
PFI+E RLL + + L++ E RN + F
Sbjct: 640 PFIEEKRLLSAMAPKDALLSDAEKARNDFGVALKFT 675
>gi|345487550|ref|XP_001601647.2| PREDICTED: 5'-3' exoribonuclease 2 homolog [Nasonia vitripennis]
Length = 828
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 261/588 (44%), Positives = 344/588 (58%), Gaps = 29/588 (4%)
Query: 134 RLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK 192
R+R E +G LPP K FDSN ITPGT FMA LS L YYIH RLNNDPGW+ IK
Sbjct: 3 RIRSELALKGAFLPPEKPKEDHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKNIK 62
Query: 193 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
VILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIML LATHE +F+I+R
Sbjct: 63 VILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIR 122
Query: 253 EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLRE 312
E F P + C +CGQ GH +C G K E G E + F+ + LRE
Sbjct: 123 E-EFKPNKPRPCDICGQLGHDMQDCLGAEPNKKEEEKIFGSEC-----QFIFVRLNVLRE 176
Query: 313 YLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF 372
YL+ E ++PN PF+ D E +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YKK
Sbjct: 177 YLERELQMPNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVTLYKKTV 236
Query: 373 RALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDV 432
GG+LT+ +L RV+ + +G+ ED IF+KR Q REK + RR + +
Sbjct: 237 YKTGGFLTNSGDVNLDRVQLILNDLGNVEDEIFKKR---QQNELAFKAREKNKRRRNEAI 293
Query: 433 EPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK--GTSGRPHKVPRLSSGA 490
S PV +F + L P + E G+ TS + ++
Sbjct: 294 SNYK--PSWTPVGQFAPNPLGKEVKPVQNARYEAYQMRVQGRNYNTSAVERALQGTNASL 351
Query: 491 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 550
+ IV S + Q+ K E K ++ D+V+L E G+K+RY
Sbjct: 352 ALEKMIVPEGESSGSRGQKRKHEEVEKEEDE------------QAHDEVRLWEDGFKDRY 399
Query: 551 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
YE KF+ + R +V L+Y GLCWV+ YYY+G SW+W++PYHYAPFASD ++
Sbjct: 400 YESKFDVLP--DNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINI 457
Query: 611 DQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
+ FE G PF+P QL+GVFP+AS +P + LM D SPI DFYP DF++D+N
Sbjct: 458 GGLSTEFERGTIPFRPLEQLMGVFPAASCKHVPAPWATLMKDSTSPIIDFYPEDFKIDLN 517
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
GK+++WQG+A LPF+DE RL ++ LT E +RN D L+V
Sbjct: 518 GKKFAWQGVALLPFVDEERLFKALEPYYGQLTVAEKKRNVRGDDRLYV 565
>gi|119498925|ref|XP_001266220.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
gi|119414384|gb|EAW24323.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
Length = 1414
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 289/747 (38%), Positives = 412/747 (55%), Gaps = 99/747 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAEN--------RIP-----------EFDALYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++PRKL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPRKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK D FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAIAQGIEM------PKEDP--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ + ++LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 INKKISEDKDWQGVDIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q ++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-----KR 408
L I EGA++L+ +YK +GGY+ +G +L+R+ I+A+ E R F+ R
Sbjct: 302 LHINEGALSLMFKIYKDVLPKMGGYVNEGGVINLKRLGMLIEALSDVEFRFFEAEYSDAR 361
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR--LASGPSP------SP 460
+R+ E + +G + P AQ + + ++ +R ASG P P
Sbjct: 362 WINAKRNGVENGSEFQEKPKGLTLTP-AQKELFKEIKKYVLNRPEKASGSKPLDLSPTLP 420
Query: 461 YQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE---NSFETDPQENKEEFKAK 517
+ + V +L + ++P + G + + N + +E EE
Sbjct: 421 ARDRKFVEQLADD-------LRLPWTTVADEHGDRFIRLQLPANEDDDSEEEEDEEASMA 473
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGW-------KERYYEEKFNAKTPEEREETRKDV 570
++ ++R +A + E+ K E + K++YY KF + EE RK +
Sbjct: 474 VQRVIRRYDNAKVQEISPEEAQKAAEKKYEEKFQDWKDKYYMSKFGWGL-DNHEEMRK-L 531
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV++YYY G+ SW WF+ YHYAP SD+ +++F+LG PFKP+ QL+
Sbjct: 532 TENYVQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVIKGLNADMNFKLGQPFKPYEQLM 591
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P +R LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 592 GVLPDRSKQIVPAAFRDLMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDERRLL 651
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFV 717
+ + EH LT EE RN + F
Sbjct: 652 EALATREHLLTPEEKARNGFGVSLKFT 678
>gi|429857774|gb|ELA32622.1| exonuclease kem1 [Colletotrichum gloeosporioides Nara gc5]
Length = 1398
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 285/744 (38%), Positives = 394/744 (52%), Gaps = 94/744 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTF----DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C H +D TTF +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+
Sbjct: 42 NCTH-KDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRA 100
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFR + DA E+ R + EG ++P + FDSN ITPGTEFMA L+ L+Y
Sbjct: 101 RRFRTALDA-------EKARDKAISEGVEMPKEPP---FDSNCITPGTEFMAKLTQQLKY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPEYDPNVRHCLYGLDADL 210
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML L +H+ HF +LRE V T G+ + K KA E + +
Sbjct: 211 IMLGLLSHDPHFCLLREEV-TFGRHN-------------------KNKARELEHQN---- 246
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ +H+ +REYL+ EF+ P F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 247 -----FYLMHLCIVREYLELEFQELQEPGKLGFPFDLERVIDDFILMAFFVGNDFLPNLP 301
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
L I EGA+ + +YK GY+ +G +L R++ ++ +G E F+ A
Sbjct: 302 RLHINEGALAAMFRIYKDILPKGDGYINEGGIINLPRLQKLLEELGKDEIESFENDAS-- 359
Query: 413 QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
E+ + K A ++ LV S R PY LD
Sbjct: 360 ---NEKWFQSKRSAEPNGVDNKKSKAKGLVLTS---SQRDLWKQKIRPYVNKPSSEPLDL 413
Query: 473 GKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SFETDPQEN----KEEFKAKLKE 520
G + K V L+ I + E ++ SF E+ +EE L
Sbjct: 414 GTSLNAADRKFVQDLADTLHIEWSTKEDDDGHRHLLLSFPEGAVESLNDEEEEGTLALYR 473
Query: 521 LLRDKSDAFNSD-NPEEDKVKLGE------PGWKERYYEEKFNAKTPEEREETRKDVVLR 573
++R+ A D PE+ + E WK +YY EKF E ++ +
Sbjct: 474 VVRNYDKALVVDITPEDAQRHYQELYDTKYQAWKTKYYLEKFPEWPQESYDKELVKLCEN 533
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y +GL WV+HYYY G+ SW WFY YHY+P SD+ ++ F LG PF+P+ QL+GV
Sbjct: 534 YVQGLQWVLHYYYHGIASWPWFYQYHYSPLTSDVVKGLGADLKFTLGQPFRPYEQLMGVL 593
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S +PE Y LMT+PNSPI DFYP DFE+DMNGK+ W+ I K+PFIDE RLL +
Sbjct: 594 PDRSKSIVPEVYWDLMTNPNSPIYDFYPRDFELDMNGKKMEWEAIVKIPFIDEKRLLSAM 653
Query: 694 KKIEHTLTEEEARRNSIMADMLFV 717
L+++E RN + F
Sbjct: 654 ATKNDQLSQQEKSRNGFGVALKFT 677
>gi|145242532|ref|XP_001393839.1| exonuclease Kem1 [Aspergillus niger CBS 513.88]
gi|134078390|emb|CAK40380.1| unnamed protein product [Aspergillus niger]
Length = 1406
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 282/743 (37%), Positives = 408/743 (54%), Gaps = 95/743 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--ETAKEKAIAQGIEM------PKEEA--FDSNCITPGTEFMAKLTEQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HFS+LRE V T G+Q ++K+ E + +
Sbjct: 211 MLGLLSHDPHFSLLREEV-TFGRQ-------------------VQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + +YK+ +GGY+ + + R+ + A+ E R F+
Sbjct: 302 LHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDALSDVEFRFFEH------ 355
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSL--VPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
E + +A++G+ EP ++P L P + ++ P + +E LD
Sbjct: 356 ---EYSDAQWIRAKKGEVTEPQSKPKGLTITPAQKELFKQVKKYVLNRPEKAAET-KPLD 411
Query: 472 NGKGTSGRPHK-VPRLSSGATIGAAIVEAENS-----------FETDPQENKEEFKAKLK 519
R K V +L+ + V E+ D + EE ++
Sbjct: 412 FASSLPARDRKFVEQLADDLRLPWTTVADEHGDRFIRVQLPGNDNEDSDDEDEEASVAVQ 471
Query: 520 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE-----EREETRKDVVLRY 574
++R +A + E+ + E ++E++ E K N + + E K++ Y
Sbjct: 472 RIIRRYDNAKVQELSAEEAQQAAEKKYEEKFQEWKNNYYVGKFGWGLDSHEEMKELTENY 531
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
+GL WV++YYY G+ SW WF+ YHYAP SD+K + +F LG PF+P+ QL+GV P
Sbjct: 532 VQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVKKGLNADTNFRLGKPFRPYEQLMGVLP 591
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
S +P YR LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E RLLD +
Sbjct: 592 DRSKKTVPAAYRDLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEERRLLDALA 651
Query: 695 KIEHTLTEEEARRNSIMADMLFV 717
EH LT EE RN A + F
Sbjct: 652 TREHLLTPEEKARNGFGASLKFT 674
>gi|358055903|dbj|GAA98248.1| hypothetical protein E5Q_04931 [Mixia osmundae IAM 14324]
Length = 1271
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/459 (49%), Positives = 305/459 (66%), Gaps = 30/459 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI----------------------DG----VKI 34
MGVPA +RWL++KYP +V V E+ P DG V+I
Sbjct: 1 MGVPALFRWLSKKYPHIVTSVKEDLPTKAQPGASRLDPVTGQPLPGSEDDPDGGGEDVEI 60
Query: 35 PVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRP 94
PVD S PNPNG E+D LYLDMNGI+HPC HPE +P P T ++ +F Y +R+ M+RP
Sbjct: 61 PVDMSLPNPNGEEFDCLYLDMNGIVHPCTHPEGKPPPETEADMMVEIFAYTERVVNMIRP 120
Query: 95 RKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQ 153
RKLL +AIDGVAPRAKMNQQRSRRFRAS++A A E+E +E+E G+++ + D +
Sbjct: 121 RKLLLIAIDGVAPRAKMNQQRSRRFRASQEAKTKAEEKEAAIREWEAMGKEVSDEYKDKK 180
Query: 154 VFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVR 213
+D N ITPGT FM +L+ +L+Y++ +LN+DPGW K++V++SDA+VPGEGEHKIM Y+R
Sbjct: 181 AWDQNAITPGTPFMDLLAASLRYWVASKLNSDPGWSKLQVVISDASVPGEGEHKIMDYIR 240
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGH 272
QR+ GYDPNTRH +YGLDADLIML+LATHE +F +LRE VF ++ + C CGQPGH
Sbjct: 241 RQRSHAGYDPNTRHVIYGLDADLIMLSLATHEPYFKVLREDVFAQDRKPRGCHRCGQPGH 300
Query: 273 LAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECI 332
++NC G K K GEFDEK + +KP+ FL + LREYL+ E +P PF DLE
Sbjct: 301 HSSNCTGAPKEKQGEFDEKNK--ITERKPFIFLDVSVLREYLEIELNVPGVPFPFDLERA 358
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 392
+DD++F+ FFVGNDFLPH+P+LEIREGAI+ L+A+++ +G YLT K +++ +
Sbjct: 359 IDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLAIWRTSLPQMGDYLTSHGKVNMKSAQF 418
Query: 393 FIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDD 431
+ + ED IFQ+R +R KR + DD
Sbjct: 419 ILDGLARREDEIFQRRRDAEERQDRNEKRRRLGNGASDD 457
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 149/229 (65%), Gaps = 9/229 (3%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
++D VKL EPG+KERYY++KF P E + R +V Y EGL WV+ YYY+G SWQW
Sbjct: 717 QDDTVKLWEPGYKERYYQQKFG--VPLEDKAFRDQIVKNYMEGLSWVLAYYYQGCPSWQW 774
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
FYP+H+APFASD DL++ +I FELG PF+PF QL+GVFP+AS +P + LMT +S
Sbjct: 775 FYPWHFAPFASDFTDLEKLDIQFELGAPFRPFEQLMGVFPAASRKHIPAPFHDLMTSEDS 834
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYP +F +DMNGK+ WQG+A LPFID +RLL + H L+E+E RRN + +D+
Sbjct: 835 PIIDFYPEEFMIDMNGKKMLWQGVALLPFIDSSRLLAALDLHYHELSEDEERRNGLGSDV 894
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 763
+FV +H L E L K+ + + + SDG+ G +P
Sbjct: 895 VFVNDNH-------GLYEALTNLYGKKPSTIPVAFDSKSSDGLAGLAAP 936
>gi|58267550|ref|XP_570931.1| Exonuclease II [Cryptococcus neoformans var. neoformans JEC21]
gi|57227165|gb|AAW43624.1| Exonuclease II, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1457
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 283/752 (37%), Positives = 387/752 (51%), Gaps = 114/752 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGL-EYDNLYLDMNGII 59
MG+P F+RW++E+YPL + PN + +DNLYLDMNGII
Sbjct: 1 MGIPKFFRWISERYPLTSQLI--------------------TPNSIPTFDNLYLDMNGII 40
Query: 60 HPCFHP---EDRPA-PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
H C HP E+ P T +++ +F YID LF ++P+K+ +MAIDGVAPRAKMNQQR
Sbjct: 41 HNCSHPPSTENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQR 100
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
SRRFRA KDA D R++ E+ G KLP D + FDSN ITPGT FMA LS L+
Sbjct: 101 SRRFRAGKDARDQ-------REKAEKNGEKLP---DEKAFDSNAITPGTPFMARLSQHLK 150
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YY+ R++ D W I+VILS +VPGEGEHKI ++RL + P Y+PNTRHCLYGLDAD
Sbjct: 151 YYVRKRISEDADWRSIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLYGLDAD 210
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML L +H+ HF +LRE V G+ R+ E
Sbjct: 211 LIMLGLLSHDPHFCLLREEV---------------------TFGRKSRQNTELANTN--- 246
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYLD EF FE DLE I+DDFI M FVGNDFLPH+P
Sbjct: 247 ------FFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFLPHLPD 300
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR----- 408
L I EGA+ + +YK + GY+ + SL R++ + + +E + F+
Sbjct: 301 LHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFEDDLLDQV 360
Query: 409 --ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 466
+ H R I++ + + R+ V Q L + F + P+P + E
Sbjct: 361 HFSGNHTRDTMVIEKARKKNRK---VITKYQQKVLNQLRSFIEKQQN---QPNPTHRLEL 414
Query: 467 VGRLDNGKGT-----SGRPHKVPRLSSGATIGAAIVEAENSFETDPQEN----------- 510
+ D + H G +++ + E Q+
Sbjct: 415 INTQDKRDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGKEEDGDW 474
Query: 511 -----KEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYEEKF--N 556
++E K ++ + R+ S A D ED K+K K +YY +K N
Sbjct: 475 ESDEMEDEGKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYHDKLEIN 534
Query: 557 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 616
P + + D+V Y EGL W+++YYY+GV SW WFY YHY+P +DLK +
Sbjct: 535 YNDPAQMQ----DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVADMKFE 590
Query: 617 FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
F+ G PF PF QL+GV P S +P YR LM + SPI DFYP +FE+DMNGK+ W+
Sbjct: 591 FDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDMNGKKQDWE 650
Query: 677 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+ K+PFID+ RLL + + LT EE RN
Sbjct: 651 AVVKIPFIDQNRLLKAMAARDVRLTPEERERN 682
>gi|156050179|ref|XP_001591051.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980]
gi|154692077|gb|EDN91815.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1390
Score = 461 bits (1185), Expect = e-126, Method: Compositional matrix adjust.
Identities = 285/768 (37%), Positives = 416/768 (54%), Gaps = 103/768 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPSISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + A T +++F +F+YI+ L+ ++P++L +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + D E R++ REG+++P + + FDSN ITPGTEFM L++ L+Y+I
Sbjct: 102 FRTALDV-------ENAREKAIREGKEMPKE---EAFDSNSITPGTEFMQKLTLQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+ +++LS VPGEGEHKIM Y+RL++ P YDPN RHCLYGLDADLIM
Sbjct: 152 AKKISEDVDWQGTEIVLSGHEVPGEGEHKIMEYIRLKKAQPDYDPNRRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q K K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQSKA-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ +H+ +REYL+ EF+ + PF DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ---FYLMHLCIVREYLELEFQELKGDGVLGFPF--DLERVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
L I EGA+ L+ VYK GGY+ +G ++ R+ + + E R F+ +
Sbjct: 301 NLHINEGALALMFKVYKTILPKGGGYINEGGVINMSRLAILLDELSHVEYRFFESESSDS 360
Query: 413 QR-HAERIKREKAQAR---RGDDVEPLAQPDSLVPVSRF---HGSRLASGPSPSPYQQSE 465
A+++ +E + +G V AQ V + G+ P +
Sbjct: 361 SWFKAKQMSKEDVMVKGKNKGKLVMTTAQQQIWKQVKSYVQKRGTEALDLSEKLPAADRK 420
Query: 466 CVGRLDNG--------KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQEN-----KE 512
L + G H +LS A +GA E ++ E + Q K+
Sbjct: 421 FAQDLAESLHLEWKTVQSDDGERHM--QLSFPAKLGADDDEEDDDEEEESQLAIMRIVKQ 478
Query: 513 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 572
KA++ ++ R+++ A D E+K + WK++YY+ KF E E T ++
Sbjct: 479 YDKAEVLDVTREQAQA-EMDRKYEEKFQ----EWKDKYYDGKFEWDRKNETELT--NLCE 531
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 632
Y +GL WV++YYY GV SW W+Y YHY+P SD+ + +++F+LG PF PF QL+GV
Sbjct: 532 NYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLGQPFHPFEQLMGV 591
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
P S +P Y LMT+P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLLD
Sbjct: 592 LPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDA 651
Query: 693 VKKIEHTLTEEEARRNSIMADMLF-----VLLSHPLS-ASIYTLDEHC 734
+ + L++ E RN + F V ++P S I+ HC
Sbjct: 652 MATKNNLLSDAEKARNEFGVSLKFTYDPDVDFTYPSSLVGIFPDIAHC 699
>gi|134112225|ref|XP_775088.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257740|gb|EAL20441.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1473
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 283/752 (37%), Positives = 387/752 (51%), Gaps = 114/752 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGL-EYDNLYLDMNGII 59
MG+P F+RW++E+YPL + PN + +DNLYLDMNGII
Sbjct: 1 MGIPKFFRWISERYPLTSQLI--------------------TPNSIPTFDNLYLDMNGII 40
Query: 60 HPCFHP---EDRPA-PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
H C HP E+ P T +++ +F YID LF ++P+K+ +MAIDGVAPRAKMNQQR
Sbjct: 41 HNCSHPPSTENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQR 100
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
SRRFRA KDA D R++ E+ G KLP D + FDSN ITPGT FMA LS L+
Sbjct: 101 SRRFRAGKDARDQ-------REKAEKNGEKLP---DEKAFDSNAITPGTPFMARLSQHLK 150
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
YY+ R++ D W I+VILS +VPGEGEHKI ++RL + P Y+PNTRHCLYGLDAD
Sbjct: 151 YYVRKRISEDADWRSIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLYGLDAD 210
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML L +H+ HF +LRE V G+ R+ E
Sbjct: 211 LIMLGLLSHDPHFCLLREEV---------------------TFGRKSRQNTELANTN--- 246
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYLD EF FE DLE I+DDFI M FVGNDFLPH+P
Sbjct: 247 ------FFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFLPHLPD 300
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR----- 408
L I EGA+ + +YK + GY+ + SL R++ + + +E + F+
Sbjct: 301 LHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFEDDLLDQV 360
Query: 409 --ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 466
+ H R I++ + + R+ V Q L + F + P+P + E
Sbjct: 361 HFSGNHTRDTMVIEKARKKNRK---VITKYQQKVLNQLRSFIEKQQN---QPNPTHRLEL 414
Query: 467 VGRLDNGKGT-----SGRPHKVPRLSSGATIGAAIVEAENSFETDPQEN----------- 510
+ D + H G +++ + E Q+
Sbjct: 415 INTQDKRDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGKEEDGDW 474
Query: 511 -----KEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYEEKF--N 556
++E K ++ + R+ S A D ED K+K K +YY +K N
Sbjct: 475 ESDEMEDEGKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYHDKLEIN 534
Query: 557 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 616
P + + D+V Y EGL W+++YYY+GV SW WFY YHY+P +DLK +
Sbjct: 535 YNDPAQMQ----DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVADMKFE 590
Query: 617 FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
F+ G PF PF QL+GV P S +P YR LM + SPI DFYP +FE+DMNGK+ W+
Sbjct: 591 FDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDMNGKKQDWE 650
Query: 677 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+ K+PFID+ RLL + + LT EE RN
Sbjct: 651 AVVKIPFIDQNRLLKAMAARDVRLTPEERERN 682
>gi|327301545|ref|XP_003235465.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326462817|gb|EGD88270.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 1424
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 286/747 (38%), Positives = 410/747 (54%), Gaps = 98/747 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E +++ +EG ++P K D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA-------ELAKEKAIKEGVEMP-KEDA--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPN----PPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK LGGY+ + ++ R+ + A+ E R F+
Sbjct: 302 LHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLAALSDVEFRFFEA------ 355
Query: 414 RHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRL 470
+ K++ GD L +P+ ++ P + +R+ + P ++ L
Sbjct: 356 -EYSDARWLKSKTLDGDQTPTLPEKPNVFTITPAQKHIFNRIKKYVTHRPMDEAGQPVPL 414
Query: 471 DNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQENKEEFKAK 517
D R K V +L+ + + V + N+ + D ++ +E +
Sbjct: 415 DLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPTNNDDDDEDDDDDESQIA 474
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKER-------YYEEKFNAKTPEEREETRKDV 570
+ +L+ +A + ED E ++++ YY+ KF E EE RK +
Sbjct: 475 ILRVLKKYENAKVKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENTEEMRK-L 532
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF PF QL+
Sbjct: 533 TENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPFFPFQQLM 592
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 593 GVLPDRSKKIVPVAFHGLMTTPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEERLL 652
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFV 717
+ EH LT EE RN+ + F
Sbjct: 653 KAMATKEHLLTPEEKARNTFGVTLKFT 679
>gi|407036374|gb|EKE38129.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 572
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/654 (40%), Positives = 374/654 (57%), Gaps = 102/654 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPV-----DTSKPNPNGLEYDNLYLDM 55
MGVP+F+RWL++K+P +IDG + D ++PN NG+EYDN Y+DM
Sbjct: 1 MGVPSFFRWLSQKFP-----------KIIDGCQGSFHEQYNDLNEPNFNGVEYDNFYIDM 49
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NG+IHPCFHP+DR +P T +++ + Y+D L +VRPRKLLY+A+DGVAPRAKMNQQR
Sbjct: 50 NGLIHPCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQR 109
Query: 116 SRRFRASKDAADSA---AEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
SRRF+++KDA ++ AEE R + LP + DSN ITPGTEFM+V+S
Sbjct: 110 SRRFKSAKDAENAELKHAEENR-----NKVMNGLPEVPYIKPLDSNCITPGTEFMSVVSK 164
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L+ YI R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PNT HC+YGL
Sbjct: 165 TLKKYIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHHCMYGL 224
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DADLIML+LATHE FSI+RE VF +Q++C++C H C ++ G D
Sbjct: 225 DADLIMLSLATHERFFSIIREKVFF--EQEQCYICNDI-HSPDKC--PHRKDIGAMD--- 276
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLPH+P
Sbjct: 277 ----TITKPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPHIP 328
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
+L+IR+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K+ +
Sbjct: 329 SLDIRDGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKE 387
Query: 413 QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
+ +A+R RLDN
Sbjct: 388 KNYAKR--------------------------------------------------RLDN 397
Query: 473 GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD 532
R ++ + + E+ N+ + QE + +A++K+ + D+ +D
Sbjct: 398 ----QIRDLEIKKANVYENSTLKSTESINTLTPEQQEQLKTQEAEIKK-IEDEERKLRAD 452
Query: 533 NPEE---DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 589
++ D+VKLGEPG+ +RYY KF P++ + +D+V Y EG+ WV+ YYY+G
Sbjct: 453 FEQKELTDEVKLGEPGYTQRYYSVKFKI-NPKQDTQKIRDIVHSYFEGMNWVLGYYYKGC 511
Query: 590 CSWQWFYPYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHAL 641
SW W+YPY YAPFA D+ + +N I ++ PF+PF QL+ V P S +
Sbjct: 512 QSWDWYYPYLYAPFAEDMGEYVDYNFEIKYKESTPFRPFEQLMSVLPPRSKSLI 565
>gi|256074378|ref|XP_002573502.1| 5'-3' exoribonuclease [Schistosoma mansoni]
gi|350644806|emb|CCD60472.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 928
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/410 (55%), Positives = 292/410 (71%), Gaps = 6/410 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID--GVKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVPAF+RWL+ KYP +V +E+ ++D G + PVDTS+PNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSMKYPSIVTHCVEKRGSILDDDGNRSPVDTSEPNPNGEEFDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPE++PAP T E+F +F+YIDRLF +VRPR++LYMAIDGVAPRAKMNQQRSRR
Sbjct: 61 IHPCTHPENKPAPKTESEMFAAIFEYIDRLFSIVRPRRVLYMAIDGVAPRAKMNQQRSRR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+++A + ERLR E G LPP + FDSN ITPGT FM+ L++AL+ YI
Sbjct: 121 FRAAQEAKEKQITIERLRNELIARGAHLPPPKEEH-FDSNCITPGTPFMSRLAVALRGYI 179
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ RL DPGW+ + V LSDANVPGEGEHKIM ++R QRN P +D NT+HCL G DADLIM
Sbjct: 180 YTRLTKDPGWKNLMVFLSDANVPGEGEHKIMDFIRRQRNNPTHDANTKHCLCGADADLIM 239
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P Q C LCGQ GH +C G K + + +E +
Sbjct: 240 LGLATHEPYFTIIRE-EFKPNQPKPCDLCGQMGHEMEDCVGAPKEE--DSNEGPPPLPSG 296
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ F+ + LR+YL + ++ FE DLE ++DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 297 DVDFIFIRLNVLRQYLAEDLKLAGITFEWDLERVIDDWVFMCFFVGNDFLPHLPSLEIRE 356
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
GAI+ L+ +YK + GG+LTD + +L RV+ + +G ED IF+ R
Sbjct: 357 GAIDRLIDIYKSTVQKTGGWLTDSGRVNLERVQLIMVDLGKMEDEIFKNR 406
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 9/235 (3%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D+V+ E GW+ RYY+ KF P + V Y GLCWV+ YYY+G SW W++
Sbjct: 482 DEVRFWEDGWRSRYYQSKFGVD-PTDAPGFCIKVGQEYALGLCWVLAYYYQGCASWDWYF 540
Query: 597 PYHYAPFASDLKDLDQFNISFEL--GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
PYHYAPFASD + + ++ F PF+P QL+ VFP+ S +P ++ LMTDP+S
Sbjct: 541 PYHYAPFASDFSKISELDVDFSKKETKPFRPLEQLMSVFPADSRSHVPPAWQDLMTDPDS 600
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYPTDF++D+NGKRY W G+A LPF+DE RLL + + LT+EE RN +D
Sbjct: 601 PIIDFYPTDFKIDLNGKRYLWMGVALLPFVDEVRLLKALDARRNLLTKEEVERNVRGSDQ 660
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVE------VKERLNPELSDGMNGYISP 763
LF HP +++L + + K+ E ++P ++ G++G I P
Sbjct: 661 LFCRADHPAGPLLHSLYKVSTEKAEKDDSEEHIIPSWASAIDPRVTFGISGLIWP 715
>gi|403163709|ref|XP_003323763.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164418|gb|EFP79344.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1203
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/430 (52%), Positives = 307/430 (71%), Gaps = 9/430 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV--VIDGV--KIPVDTSKPNPNGLEYDNLYLDMN 56
MGVPA +RWL++KYP VV VIE+ P +DG ++P+D S+ NPNG+E+DNLYLDMN
Sbjct: 1 MGVPALFRWLSKKYPKVVEQVIEDVPAQNAVDGGTEEVPIDMSQRNPNGMEFDNLYLDMN 60
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
GI+HPC HPE + P T E+ +F Y +R+ MVRPRKLL +AIDGVAPRAKMNQQRS
Sbjct: 61 GIVHPCTHPEGKKPPETEAEMMIEVFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQQRS 120
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPP--KSDSQVFDSNVITPGTEFMAVLSIAL 174
RRFRA+++A E++ L +E++++G++LP K+D + +DSN ITPGT FM +L+ +L
Sbjct: 121 RRFRAAQEAKVKEEEKQALIEEYKQQGKELPEDYKTDKKAWDSNAITPGTPFMTLLTESL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+I ++N D GW +I+VILSDA+VPGEGEHKIM +VR QR P YDPNT+H +YGLDA
Sbjct: 181 RYWIVYKMNTDKGWSQIQVILSDASVPGEGEHKIMDFVRRQRTQPSYDPNTKHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML+LATHE HF +LRE VF ++ K C+ CGQ GH ++ C+GK K K E D K
Sbjct: 241 DLIMLSLATHEPHFKVLREDVFADQKKGKGCYTCGQLGHHSSQCQGKPKEKVDEHDTK-- 298
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ V +KP+ FL + LREYL E I PF D+E +DD++ + FFVGNDFLPH+P+
Sbjct: 299 QKPVERKPFIFLDVGILREYLAIELNIGGLPFPFDIERAIDDWVLLIFFVGNDFLPHLPS 358
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
LEIREGAI+ L+ ++K +GG+LTD +L+R E ++ + S ED IF++R +
Sbjct: 359 LEIREGAIDTLLKIWKTNLGRMGGFLTDCGALNLKRTEIILEGLASREDEIFRRRREAEE 418
Query: 414 RHAERIKREK 423
R + KR K
Sbjct: 419 RQDQSAKRRK 428
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 148/229 (64%), Gaps = 9/229 (3%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
++D VKL EPG++ERY+ +KF + +E E ++ +V Y EGL WV+ YYY+G SWQW
Sbjct: 692 QDDTVKLWEPGYRERYFRQKFGIELNDEVE--KRKIVKHYVEGLAWVLAYYYQGCQSWQW 749
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
FYPYHY+PFASD +L++F I F LG PFKP+ QL+GVFP+AS +P+ Y LM + +S
Sbjct: 750 FYPYHYSPFASDFTNLEEFEIKFNLGQPFKPYEQLMGVFPAASRCHIPDVYHDLMMNDDS 809
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYP +FE+DMNGK+ WQG+A LPFI++ RLL+ +K E L E+ RN +
Sbjct: 810 PIKDFYPEEFEIDMNGKKMLWQGVALLPFIEQDRLLNSMKDCEDRLAPEDKIRNEPGHVV 869
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 763
+F +HP + CK + ++ E L+P ++G+ G P
Sbjct: 870 MFCGEAHP------QYENFCKIYQKRDNKEAVT-LDPAHANGVFGSALP 911
>gi|255728793|ref|XP_002549322.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
gi|240133638|gb|EER33194.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
Length = 1513
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 287/758 (37%), Positives = 420/758 (55%), Gaps = 109/758 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL+ +ID +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLISQ--------LIDENQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHP-EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H +D T D+++ +F+YID LF +++P+K YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 ACTHSNDDTLTRLTDDQMYSAIFNYIDHLFQIIKPKKTFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R + +A EE L++ ++ PK D FDSN ITPGTEFM+ L++ L+Y+IH
Sbjct: 102 RTAYEA------EENLKKAIA--NGEVIPKEDP--FDSNSITPGTEFMSKLTVNLKYFIH 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++ D W I +ILS VPGEGEHKIM Y+R R+ P Y+PN RHC+YGLDADLIML
Sbjct: 152 KKITEDSNWANIDIILSGHEVPGEGEHKIMEYIRAIRSQPEYNPNLRHCIYGLDADLIML 211
Query: 240 ALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
+L TH+ HF++LR EV F P +K+ G+ D +
Sbjct: 212 SLVTHDPHFALLREEVTFGP----------------------SKKSLGDKD-------LS 242
Query: 299 KKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LHI LREYL EF+ + N FE + E I+DDFI + + +GNDFLP++P L I
Sbjct: 243 DQKFFLLHISLLREYLSLEFQDLENQLTFEYNFERILDDFILIMYVIGNDFLPNLPDLFI 302
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+GA LL+AV K+ GY+ + K +L+R+ + + + ++E F+K+ +
Sbjct: 303 NKGAFPLLIAVIKQALLDSDGYINENGKINLKRLNIYFKKLSNFEFENFEKKEVDVEWFN 362
Query: 417 ER-----IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
++ I EK + + G + L LV + AS P E + L+
Sbjct: 363 KKLNDVSISGEKKRQQLGKLI-ILKDQKKLVGSIKPWLMEWASQP-------IETLLSLE 414
Query: 472 N-GKGTSGRPHK---------VPRLSSGATIGAAIVEAENSFETD-------PQENKEEF 514
N GK + + +K + + A ++ +++E P E++EE
Sbjct: 415 NEGKLPTLKLNKDDVENNLDFIKEFALQAGFLIIHSKSNDTYEAKIDVDGIIPTESEEER 474
Query: 515 KAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNAKTPEEREE 565
++ EL + + +++ E ++V L E WK+ YY+ K + E++EE
Sbjct: 475 NDRINELRKTIKEYQSAELIESEEV-LNETKSVYSHKFEDWKDNYYKSKLHFSIKEDKEE 533
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLDQFNI--SFEL 619
K + Y EGL WV++YYY GV SW WFY YHYAP SD L+ L + NI +FE
Sbjct: 534 LLK-LTTHYVEGLQWVLYYYYRGVPSWNWFYKYHYAPRISDISLGLEYLIENNIELTFEK 592
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
HPFKPF QL+ V P+ S +P YR LMTD SPI +FYP + ++DMNGK SW+ +
Sbjct: 593 SHPFKPFEQLMAVLPARSRKLMPLVYRPLMTDEKSPIINFYPHEVDIDMNGKTASWEAVV 652
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
L F+DE +L+D +K IE LT +E RNS + + F+
Sbjct: 653 LLDFVDEKKLIDVLKPIEEKLTPDETARNSYGSPIKFI 690
>gi|70985050|ref|XP_748031.1| exonuclease Kem1 [Aspergillus fumigatus Af293]
gi|66845659|gb|EAL85993.1| exonuclease Kem1, putative [Aspergillus fumigatus Af293]
gi|159126045|gb|EDP51161.1| exonuclease Kem1, putative [Aspergillus fumigatus A1163]
Length = 1418
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 288/747 (38%), Positives = 412/747 (55%), Gaps = 99/747 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAEN--------RIP-----------EFDALYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++PRKL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPRKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK D FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAIAQGIEM------PKEDP--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ + ++LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 INKKISEDKDWQGVDIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q ++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-----KR 408
L I EGA++L+ +YK +GGY+ +G +L+R+ I+A+ E R F+ R
Sbjct: 302 LHINEGALSLMFKIYKDVLPKMGGYVNEGGVINLKRLGMLIEALSDVEFRFFEAEYSDAR 361
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSR--LASGPSP------SP 460
+R+ E + +G + P AQ + + ++ +R ASG P P
Sbjct: 362 WINAKRNGVANGSEFQEKPKGLTLTP-AQKELFKEIKKYVLNRPEKASGSKPLDLSPTLP 420
Query: 461 YQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE---NSFETDPQENKEEFKAK 517
+ + V +L + ++P + G + + N + +E EE
Sbjct: 421 ARDRKFVEQLADD-------LRLPWTTVADEHGDRFIRLQLPVNEDDDSEEEEDEEASMA 473
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGW-------KERYYEEKFNAKTPEEREETRKDV 570
++ ++R +A + E+ K E + K++YY KF + EE RK +
Sbjct: 474 VQRVIRRYDNAKVQEISPEEAQKAAEKKYEEKFQDWKDKYYMSKFGWGL-DNHEELRK-L 531
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV++YYY G+ SW WF+ YHYAP SD+ +++F+LG PFKP+ QL+
Sbjct: 532 TENYVQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVIKGLNADMNFKLGQPFKPYEQLM 591
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P +R LMT P SPI DFYP +FE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 592 GVLPDRSKQIVPAAFRDLMTSPESPIIDFYPREFELDMNGKKMEWEAVVKIPFIDERRLL 651
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFV 717
+ + EH LT EE RN + F
Sbjct: 652 EALATREHLLTPEEKARNGFGVSLKFT 678
>gi|310794358|gb|EFQ29819.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1407
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 282/746 (37%), Positives = 397/746 (53%), Gaps = 99/746 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTF----DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C H +D TTF +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+
Sbjct: 42 NCTH-KDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRA 100
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFR + D E+ R + EG ++P + FDSN ITPGTEFMA L+ L+Y
Sbjct: 101 RRFRTALDT-------EKARDKAISEGVEMPKEPP---FDSNCITPGTEFMAKLTQQLKY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P YD N RHCLYGLDADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDSNVRHCLYGLDADL 210
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML L +H+ HF +LRE V T G+ K K E + +
Sbjct: 211 IMLGLLSHDPHFCLLREEV-TFGRVSKA-------------------KTRELEHQN---- 246
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ LH+ +REYL+ EF+ P F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 247 -----FYLLHLCIVREYLELEFQELKEPGRLSFPFDLERVIDDFILMAFFVGNDFLPNLP 301
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
L I EGA+ + +YK GY+ +G +L R++ + + E F+ H
Sbjct: 302 RLHINEGALAAMFRIYKSVLPLGDGYINEGGVINLPRLQRLLNELAKDETNQFE-----H 356
Query: 413 QRHAERIKREKA--QARRGDDVEPLAQPDSLVPVSR-FHGSRLASGPSPSPYQQSECVGR 469
E+ + K ++ D+ +P + L R R+ PY +
Sbjct: 357 DVSDEKWFQSKKLLESNGADNKKPKGKGLVLTSSQRDLWKQRI------RPYVKKPSSEP 410
Query: 470 LDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SF---ETDPQENKEEFKAKL 518
LD G + K V L+ I + E + SF + + +EE L
Sbjct: 411 LDLGTSLNAADRKFVQDLADTLHIEWSTKEDDEGHRHLLLSFPKGAENVNDEEEEGTLAL 470
Query: 519 KELLRDKSDAFNSDNPEEDKVKLGE-------PGWKERYYEEKFNAKTPEEREETRKDVV 571
++R+ A D ED + + GWK +YY +KF PE+ E +
Sbjct: 471 YRVMRNYDKATVVDVGGEDAQRQYKELYDQKYQGWKTKYYLQKFPEWAPEQYETELTKLC 530
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
Y +GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG PF+PF QL+G
Sbjct: 531 ENYVQGLQWVLYYYYRGIASWPWFYQYHYSPLTSDVTRGLGADLNFKLGQPFRPFEQLMG 590
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P S +PE Y LMT+PNSPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 591 VLPDRSKSIVPEVYWDLMTNPNSPIYDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLS 650
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFV 717
++ L+E + RN + F
Sbjct: 651 AMEPKNKLLSEGQKERNGFGVALKFT 676
>gi|425772513|gb|EKV10914.1| Exonuclease Kem1, putative [Penicillium digitatum PHI26]
Length = 1393
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 284/751 (37%), Positives = 409/751 (54%), Gaps = 110/751 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D+LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPSISMLIAES--------RIP-----------EFDSLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D +PT T D++F +F+YI+ LF ++P+KL YMA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-SDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA + A+E+ ++Q E PK D+ FDSN ITPGTEFM L+ L+Y+
Sbjct: 101 RFRTALDAEN--AKEKAIQQGLEM------PKEDA--FDSNCITPGTEFMQKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P Y+ N RHCLYGLDADLI
Sbjct: 151 INKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VSKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLSVVREYLELEFQELEQEGVLDFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF-------- 405
L I EGA+ L+ +YK+ +GGY+ + +++R+ + A+ + E R F
Sbjct: 302 LHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTALSAVEYRFFEAENSDAQ 361
Query: 406 ---------------QKRARL----HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSR 446
Q++ L Q+ +I ++ R EPL P +L R
Sbjct: 362 WIKSKKDSNVTLSSSQQKKELTLTPSQKEILKIVKKYVLNRPDKASEPLDLPPTLPARDR 421
Query: 447 FHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD 506
RLA + +DN G +P + EA + +
Sbjct: 422 TFVERLAD-------ELRLSWSSIDNENGDRFMRLLLPPTQGDSDDDEEDEEASMAVQRI 474
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
++ + KAK++++ +++ E+ K E WK++YY KF + +EE
Sbjct: 475 IRKYE---KAKVQDMTAEEAQKAAQ---EKYDAKFLE--WKDKYYRTKFGWGL-DNKEEM 525
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
+K + Y +GL WV+ YYY G+ SW WF+ YHYAP SD+ D ++ F+LG PF+PF
Sbjct: 526 KK-LTQNYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDVNDGLGADMDFKLGQPFRPF 584
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
+QL+GV P S +P Y LMT P+SPI DFYP DF++DMNGK+ W+ + K+PFIDE
Sbjct: 585 DQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPRDFDLDMNGKKMEWEAVVKIPFIDE 644
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLLD +K E L+ +E RN A + F
Sbjct: 645 KRLLDALKTKETQLSADEKARNDFGACLKFT 675
>gi|425774945|gb|EKV13236.1| Exonuclease Kem1, putative [Penicillium digitatum Pd1]
Length = 1393
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 284/751 (37%), Positives = 409/751 (54%), Gaps = 110/751 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D+LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPSISMLIAES--------RIP-----------EFDSLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D +PT T D++F +F+YI+ LF ++P+KL YMA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-SDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA + A+E+ ++Q E PK D+ FDSN ITPGTEFM L+ L+Y+
Sbjct: 101 RFRTALDAEN--AKEKAIQQGLEM------PKEDA--FDSNCITPGTEFMQKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P Y+ N RHCLYGLDADLI
Sbjct: 151 INKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VSKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLSVVREYLELEFQELEQEGVLDFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF-------- 405
L I EGA+ L+ +YK+ +GGY+ + +++R+ + A+ + E R F
Sbjct: 302 LHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTALSAVEYRFFEAENSDAQ 361
Query: 406 ---------------QKRARL----HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSR 446
Q++ L Q+ +I ++ R EPL P +L R
Sbjct: 362 WIKSKKDSNVTLSSSQQKKELTLTPSQKEILKIVKKYVLNRPDKASEPLDLPPTLPARDR 421
Query: 447 FHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETD 506
RLA + +DN G +P + EA + +
Sbjct: 422 TFVERLAD-------ELRLSWSSIDNENGDRFMRLLLPPTQGDSDDDEEDEEASMAVQRI 474
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
++ + KAK++++ +++ E+ K E WK++YY KF + +EE
Sbjct: 475 IRKYE---KAKVQDMTAEEAQKAAQ---EKYDAKFLE--WKDKYYRTKFGWGL-DNKEEM 525
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
+K + Y +GL WV+ YYY G+ SW WF+ YHYAP SD+ D ++ F+LG PF+PF
Sbjct: 526 KK-LTQNYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDVNDGLGADMDFKLGQPFRPF 584
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
+QL+GV P S +P Y LMT P+SPI DFYP DF++DMNGK+ W+ + K+PFIDE
Sbjct: 585 DQLMGVLPDRSKKIVPTAYWDLMTSPDSPIYDFYPRDFDLDMNGKKMEWEAVVKIPFIDE 644
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLLD +K E L+ +E RN A + F
Sbjct: 645 KRLLDALKTKETQLSADEKARNDFGACLKFT 675
>gi|302506324|ref|XP_003015119.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
gi|291178690|gb|EFE34479.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
Length = 1302
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 285/747 (38%), Positives = 409/747 (54%), Gaps = 98/747 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E +++ +EG ++P K D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA-------ELAKEKAIKEGVEMP-KEDA--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPN----PPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK LGGY+ + ++ R+ + A+ E R F+
Sbjct: 302 LHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLTALSDVEFRFFEA------ 355
Query: 414 RHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRL 470
+ K++ GD L +P+ ++ P + +R+ + P ++ L
Sbjct: 356 -EYSDARWLKSKTLDGDQTPTLPEKPNVLTITPAQKHIFNRIKKYVTHRPMDEAGQPVPL 414
Query: 471 DNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQENKEEFKAK 517
D R K V +L+ + + V + N + D ++ +E +
Sbjct: 415 DLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPTNDDDDDEDDDDDESQIA 474
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKER-------YYEEKFNAKTPEEREETRKDV 570
+ +L+ +A + ED E ++++ YY+ KF E EE RK +
Sbjct: 475 ILRVLKKYENAKVKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENTEEMRK-L 532
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF PF QL+
Sbjct: 533 TENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPFFPFQQLM 592
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E RLL
Sbjct: 593 GVLPDRSKKIVPVAFHGLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEEERLL 652
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFV 717
+ EH LT EE RN+ + F
Sbjct: 653 KAMATKEHLLTPEEKARNTFGVTLKFT 679
>gi|345569898|gb|EGX52724.1| hypothetical protein AOL_s00007g507 [Arthrobotrys oligospora ATCC
24927]
Length = 1409
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 281/752 (37%), Positives = 414/752 (55%), Gaps = 112/752 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------RIP-----------EFDALYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T +++F +F+YI+ LF ++P+K +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEEKMFIAIFNYIEHLFGKIKPKKTFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR +A + E+ Q+ ++G ++P K D FDSN ITPGT FMA LS L+Y+
Sbjct: 101 RFR-------TALDNEKAYQKAVKDGVEMP-KEDP--FDSNCITPGTGFMAKLSEQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ ++++D W+ +++ILS VPGEGEHKIM Y+RL + PGY+PN RHCLYGLDADLI
Sbjct: 151 INKKVSDDAEWQGLEIILSGHEVPGEGEHKIMEYIRLTKAQPGYNPNLRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+ ++ +K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRNNQ-------------------KKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEI----DLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ P + D E ++DDF+ + FFVGNDFLPH+P
Sbjct: 246 ----FYLMHLSIVREYLELEFQELKEPGLLSVPYDFERVLDDFVLLAFFVGNDFLPHLPG 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA++L+ +YKK GY+ D + +L + + + +E ++F+
Sbjct: 302 LHINEGALSLMFKIYKKVLTKAKGYINDHGQVNLETLGLVLDEMEEFEYKVFE------- 354
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ------QSECV 467
E + ++ D+E A+P HG + + Y+ ++
Sbjct: 355 --TETADASWLRGKQMKDLEAAAKPKK-------HGKVVMTTNQKGLYKLVREFIENRKK 405
Query: 468 GRLD---NGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-----------SFETDPQENKE 512
G +D + KG + K V L+ + + EN S + D + E
Sbjct: 406 GEIDKYLDIKGLNAADRKFVEDLAQSLRLQYITITDENVEKFARLSFYPSLDGDEEFEDE 465
Query: 513 EFKAKLKELLRDKSDA----FNSDNPEEDKVKLGEP---GWKERYYEEKFNAKTPEEREE 565
E +A L + + A ++D + + +L + W++ YY+ KF ++ EE
Sbjct: 466 EGRAALDRVFKAFEKASIVDISADEAKAEMERLYQEKFRAWRDGYYKAKFGFGL-DDTEE 524
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKP 625
R + Y EG+ WV+ YYY GV SW WF+ YHYAP SD+K N++F LG PF+P
Sbjct: 525 MR-GLAENYIEGIQWVLFYYYRGVASWGWFFRYHYAPKISDVKKGLGANLNFRLGSPFRP 583
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
F QL+GV P S +PE Y LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI
Sbjct: 584 FEQLMGVLPDRSKKIVPEPYHVLMTSPDSPILDFYPRDFELDMNGKKQDWEAVVKIPFIQ 643
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
E RLL ++ EH LT++E RN + F
Sbjct: 644 EDRLLAAMRTREHLLTKDEISRNGFGITLKFT 675
>gi|302656474|ref|XP_003019990.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
gi|291183768|gb|EFE39366.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
Length = 1303
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 284/747 (38%), Positives = 409/747 (54%), Gaps = 98/747 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E +++ +EG ++P K D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA-------ELAKEKAIKEGVEMP-KEDA--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPN----PPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK LGGY+ + ++ R+ + A+ E R F+
Sbjct: 302 LHINEGALAWMFKVYKDVLPKLGGYVNEHGTINMERLRTLLAALSDVEFRFFEA------ 355
Query: 414 RHAERIKREKAQARRGDDVEPL-AQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRL 470
+ K++ GD L +P+ ++ P + +R+ + P ++ L
Sbjct: 356 -EYSDARWLKSKTLDGDQTPTLPEKPNVLTITPAQKHIFNRIKKYVTHRPMDEAGQPVPL 414
Query: 471 DNGKGTSGRPHK-VPRLSSGATIGAAIVEAE------------NSFETDPQENKEEFKAK 517
D R K V +L+ + + V + N + D ++ +E +
Sbjct: 415 DLSPSLPARDRKFVEQLADSLHLKWSSVLNQHEERFLRVQLPTNDDDDDEDDDDDESQIA 474
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKER-------YYEEKFNAKTPEEREETRKDV 570
+ +L+ +A + ED E ++++ YY+ KF E EE RK +
Sbjct: 475 ILRVLKKYENAKVKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGL-ENTEEMRK-L 532
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF PF QL+
Sbjct: 533 TENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLGQPFFPFQQLM 592
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P + LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E RLL
Sbjct: 593 GVLPDRSKKIVPVAFHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEEERLL 652
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFV 717
+ EH LT +E RN+ + F
Sbjct: 653 KAMATKEHLLTPDEKARNTFGVTLKFT 679
>gi|255955773|ref|XP_002568639.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590350|emb|CAP96529.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1390
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 294/804 (36%), Positives = 436/804 (54%), Gaps = 106/804 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + ++I +IP E+D+LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SMLIADSRIP-----------EFDSLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D +PT T D++F +F+YI+ LF ++P+KL YMA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-SDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA + A+E+ ++Q E PK D FDSN ITPGTEFM L+ L+Y+
Sbjct: 101 RFRTALDAEN--AKEKAIQQGLEM------PKEDP--FDSNCITPGTEFMQKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P Y+ N RHCLYGLDADLI
Sbjct: 151 INKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VSKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLSVVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR--- 410
L I EGA+ L+ +YK+ +GGY+ + +++R+ + A+ + E R F+
Sbjct: 302 LHINEGALALMFKLYKEVLPKMGGYINEQGVINVQRLGMLVTALSAVEYRFFEAENSDAQ 361
Query: 411 -LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSP------SPYQQ 463
+ + I +Q ++ + P +Q + L V ++ +R P P +
Sbjct: 362 WIKSKKDSNIDYSSSQQKKELTLTP-SQKEILKTVKKYVLNRSEKASEPLDLPPTLPARD 420
Query: 464 SECVGR-----------LDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE 512
V R LDN G +P + + EA + + ++ +
Sbjct: 421 RTFVERLADELRLSWSSLDNENGDRFMRLSLPPTQADSDDDEEDEEASMAVQRIIRKYE- 479
Query: 513 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 572
KAK++E+ ++ + ++K WK+ YY KF + +EE +K +
Sbjct: 480 --KAKVQEMTPEE-----AQKAAQEKYDAKFLQWKDNYYRTKFGWGL-DNKEEMKK-LAR 530
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 632
Y +GL WV+ YYY G+ SW WF+ YHYAP SD+ D +++F+LG PF+PF+QL+GV
Sbjct: 531 NYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDVNDGLDADMNFKLGQPFRPFDQLMGV 590
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
P S +P Y LMT P+SPI DFYP DF++DMNGK+ W+ + K+PFIDE RLLD
Sbjct: 591 LPDRSKKIVPTAYWDLMTSPDSPIYDFYPRDFDLDMNGKKMEWEAVVKIPFIDEKRLLDA 650
Query: 693 VKKIEHTLTEEEARRNSIMADMLF-----VLLSHPLSA-SIYTLDEHCKQLKIKERVEVK 746
+K E+ L+ +E RN A + F V +P S ++ C+ ++ + V
Sbjct: 651 LKTKENQLSADEKARNDFGACLKFTYSPDVNFVYPSSMPGVFPDLPSCRCIENMFDLPVM 710
Query: 747 ERLNP--ELSDGMNGYISPCAGDP 768
+ L P L DG++ I+ AG P
Sbjct: 711 DGLEPYAGLMDGVHLGIAALAGFP 734
>gi|240277600|gb|EER41108.1| exonuclease II Exo2 [Ajellomyces capsulatus H143]
Length = 1138
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 286/756 (37%), Positives = 405/756 (53%), Gaps = 110/756 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--ELAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK+ LGGY+ + +L R+ + ++ E R F+ +
Sbjct: 302 LHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFEA-----E 356
Query: 414 RHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
R + K + + EP A ++ P + SR+ + P LD
Sbjct: 357 FSDARWIKSKMKGEELESSEPPANAKDFAISPAQKHIFSRIKKYVTHRPVNDQGQSVPLD 416
Query: 472 NGKGTSGRPHK-VPRLSSGATIGAAIVEAEN----------SFETDPQEN---------- 510
R K V +L+ + V E+ S ET +
Sbjct: 417 LSPNLPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQTSGSAGDDDGDDEE 476
Query: 511 ---------KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE 561
K AK+KE + A + E K +L WK+ YY+ KF +
Sbjct: 477 GQIALLRVMKRYENAKVKE-----TTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWAM-D 530
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
EE R+ + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+LG
Sbjct: 531 NHEEMRQ-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLGQ 589
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
PF PF QL+GV P S +P Y +LMT P SPI DFYP DFE+DMNGK+ W+ + K+
Sbjct: 590 PFHPFEQLMGVLPDRSKQIVPSAYHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKI 649
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
PFIDE RLL + +H LT EE RN + F
Sbjct: 650 PFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFT 685
>gi|358371673|dbj|GAA88280.1| exonuclease Kem1 [Aspergillus kawachii IFO 4308]
Length = 1405
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 280/743 (37%), Positives = 407/743 (54%), Gaps = 95/743 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--ETAKEKAIAQGIEM------PKEEA--FDSNCITPGTEFMAKLTEQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 INKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HFS+LRE V T G+Q ++K+ E + +
Sbjct: 211 MLGLLSHDPHFSLLREEV-TFGRQ-------------------VQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FFLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + +YK+ +GGY+ + + R+ + A+ E R F+
Sbjct: 302 LHINEGALAFMFKIYKESLPKMGGYINEQGVIKMDRLGILLDALSDVEFRFFEH------ 355
Query: 414 RHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
E + +A++GD EP +P ++ P + ++ P + +E LD
Sbjct: 356 ---EYSDAQWIRAKKGDVTEPQEKPKGFTITPAQKELFKQVKKYVLNRPGKAAET-KPLD 411
Query: 472 NGKGTSGRPHK-VPRLSSGATIGAAIVEAENS-----------FETDPQENKEEFKAKLK 519
R K V +L+ + V E+ D + EE ++
Sbjct: 412 FASSLPARDRKFVEQLADDLRLPWTTVADEHGDRFIRVQLPGNDNDDSDDEDEEASVAVQ 471
Query: 520 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE-----EREETRKDVVLRY 574
++R +A + E+ + E ++ ++ E K N + + E +++ Y
Sbjct: 472 RIIRRYDNAKVQELSPEEAQQAAEKKYEAKFQEWKNNYYVGKFGWGLDSHEEMRELTENY 531
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
+GL WV++YYY G+ SW WF+ YHYAP SD+K + +F LG PF+P+ QL+GV P
Sbjct: 532 VQGLQWVLYYYYRGIASWPWFFKYHYAPMISDVKKGLNADTNFRLGKPFRPYEQLMGVLP 591
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
S +P YR LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E RLLD +
Sbjct: 592 DRSKKTVPAAYRDLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEERRLLDALA 651
Query: 695 KIEHTLTEEEARRNSIMADMLFV 717
EH LT EE RN A + F
Sbjct: 652 TREHLLTPEEKARNGFGASLKFT 674
>gi|325093685|gb|EGC46995.1| exonuclease II Exo2 [Ajellomyces capsulatus H88]
Length = 1451
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 283/751 (37%), Positives = 405/751 (53%), Gaps = 100/751 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--ELAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK+ LGGY+ + +L R+ + ++ E R F+ +
Sbjct: 302 LHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFEA-----E 356
Query: 414 RHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
R + K + + EP A ++ P + SR+ + P LD
Sbjct: 357 FSDARWIKSKMKGEELESSEPPANAKDFAISPAQKHIFSRIKKYVTHRPVNDQGQFVPLD 416
Query: 472 NGKGTSGRPHK-VPRLSSGATIGAAIVEAENS-----FETDPQENKEEFKAKLKE----- 520
R K V +L+ + V E+ + +E + A +
Sbjct: 417 LSPNLPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQTSGSAGDDDGDDEE 476
Query: 521 ----LLR----------DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
LLR ++ A + E K +L WK+ YY+ KF + EE
Sbjct: 477 GQIALLRVMKRYENAKVKETTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWGM-DNHEEM 535
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
R+ + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+LG PF PF
Sbjct: 536 RQ-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLGQPFHPF 594
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
QL+GV P S +P Y +LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE
Sbjct: 595 EQLMGVLPDRSKQIVPSAYHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDE 654
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLL + +H LT EE RN + F
Sbjct: 655 KRLLSAMATKKHLLTPEENARNEFGVTLKFT 685
>gi|448107259|ref|XP_004205309.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|448110212|ref|XP_004201573.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359382364|emb|CCE81201.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359383129|emb|CCE80436.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
Length = 1508
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 279/765 (36%), Positives = 417/765 (54%), Gaps = 123/765 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL+ +IDG +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLISQ--------LIDGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHP-EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H +D T D+++ +F YI+ LF +++P K+ YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 TCTHSNDDTLVRMTEDQMYAAIFTYIEHLFEIIKPNKVFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R + +A E L++ + +G ++P K D FDSN ITPGTEFMA L+ L+Y+IH
Sbjct: 102 RTAYEA------ELNLKKAIQ-DGAEIP-KEDP--FDSNAITPGTEFMAKLTDNLKYFIH 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++ D W +++ILS VPGEGEHKIM Y+R +N P +PN RHC+YGLDADLIML
Sbjct: 152 KKITEDSRWANVQIILSGHEVPGEGEHKIMEYIRTMKNQPDAEPNLRHCIYGLDADLIML 211
Query: 240 ALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L +H HF++LRE V F P ++++K+ + +++
Sbjct: 212 GLVSHYPHFALLREEVTFGP---------------------RSQKKSSDINDQK------ 244
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ LH+ LREYL EFR + FE + E ++DDFI + + +GNDFLP++P L +
Sbjct: 245 ---FYLLHLSLLREYLSLEFRDLDTELNFEYNFERVLDDFILIMYVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+GA L++ +K+ R GYL + +L+R++ ++ + +E F+K+ +
Sbjct: 302 NKGAFPLILETFKQALRQCDGYLNENGTINLKRLDIWLHILSEFELENFEKQDIDVEWFN 361
Query: 417 ER-----IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+R I EK + R G + L LV + + P+ C ++
Sbjct: 362 KRLEDISITGEKRRERMG-KLLILKDQKKLVGMIK-------------PWLLEICNTKIS 407
Query: 472 NGKGTSGRPH----KVPRLSS----------GATIGAAIV--EAENSFE-------TDPQ 508
+ + ++PR S +G IV +++++E T P
Sbjct: 408 DLIKLANEDKLPTLELPREESEKHIEFLKMFALDVGILIVHSRSKDTYEVRLDVDGTPPD 467
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNAKT 559
E+ EE + +L +R + S N E + L E WK++YY+EK +
Sbjct: 468 ESDEEHEERLAN-IRKIIKRYQSANLVETEDLLKESKDVYDSKFMNWKDQYYKEKVHFSI 526
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK-DLDQF----- 613
+ +E D+ Y EGL WV++YYY+G SW WFY YHYAP SD+ ++++
Sbjct: 527 ND--KENLVDMTQNYVEGLQWVLYYYYKGCPSWNWFYRYHYAPRISDIHVGVEEYVKTNH 584
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
I FE PFKPF QL+ V P+ S +P YR+LMTDP SP+ DFYP + ++DMNGK+
Sbjct: 585 KIKFEKSTPFKPFEQLMAVLPARSRKLMPIVYRQLMTDPASPLIDFYPAEVDIDMNGKKA 644
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
SW+ + L F+DE RLLD +K E LT EE RRNS D+ F+
Sbjct: 645 SWEAVVLLSFVDEKRLLDALKPFEQKLTIEEKRRNSFGTDLRFIF 689
>gi|336262386|ref|XP_003345977.1| hypothetical protein SMAC_06532 [Sordaria macrospora k-hell]
gi|380089569|emb|CCC12451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1428
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 282/747 (37%), Positives = 406/747 (54%), Gaps = 101/747 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPE--DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + D T +E+F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +A + E+ R + REG++LP + + FDSN ITPGTEFMA LS L+Y+I
Sbjct: 102 FR-------TALDNEKARDKAIREGKELPKE---EPFDSNCITPGTEFMAKLSQQLRYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W++ +++LS VPGEGEHKIM Y+R R P Y N RHCLYGLDADLIM
Sbjct: 152 NKKVSEDKDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSANVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+ G AK K +E+
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGR------------------GPAKHKTKGLEEQN------ 246
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGNDFLP++P L
Sbjct: 247 ---FYLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGNDFLPNLPRL 303
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
I EGA++L+ +YK+ GY+ +G K +L+R+ ++ +G E R F+ H+
Sbjct: 304 HINEGALSLMFRIYKEILPRGDGYINEGGKVNLQRLGLLLEELGKEEYRFFE-----HEH 358
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ-------SECV 467
+ R K +D E A+ ++ G + + + ++Q +
Sbjct: 359 EDQGWLRAKKMLE--NDEEETAK-------AKIKGKLIVTTNQKNLWKQKIRKFLTNRST 409
Query: 468 GRLDNGKGTSGRPHKVPR-LSSGATIGAAIVEAENSFE---------TDPQENKEEFKAK 517
LD G K + L+ A I A E + D E EE ++
Sbjct: 410 NTLDLGTELKAEDRKFAQDLADTAHIPWATKEDDEGHRHLILQFPERDDESEEDEEAQSA 469
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYE-------EKFNAKTPEEREETRKDV 570
+ +++ +A D D E +++++ E EKF TPE +EE + +
Sbjct: 470 VLRIIKKYDNAQVVDLTAADSKAAMEAKYQQKFQEWKDKYYAEKFEEWTPENKEEELRHL 529
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y +GL WV++YYY G+ SW WFY YHYAP SD+ + +++F++G PFKP+ QL+
Sbjct: 530 TENYVQGLQWVLYYYYRGIASWPWFYRYHYAPMISDVVKGLKADLNFKMGQPFKPYEQLM 589
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
GV P S +P Y LMT+P+SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL
Sbjct: 590 GVLPDRSKKIVPTVYWDLMTNPDSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLL 649
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFV 717
+ L++ E RN + F
Sbjct: 650 AAMGPKNELLSDVEKSRNDFGVALKFT 676
>gi|225557050|gb|EEH05337.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 282/751 (37%), Positives = 407/751 (54%), Gaps = 100/751 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--ELAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEENALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK+ LGGY+ + +L R+ + ++ E R F+ +
Sbjct: 302 LHINEGALAWMFKVYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFEA-----E 356
Query: 414 RHAERIKREKAQARRGDDVEPLAQPD--SLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
R + K + + EP A ++ P + +R+ + P LD
Sbjct: 357 FSDARWIKSKMKGEELESSEPPANAKDFAISPAQKHIFNRIKKYVTHRPVNDQGQSVPLD 416
Query: 472 NGKGTSGRPHK-VPRLSSGATIGAAIVEAEN----------SFETDP-------QENKEE 513
R K V +L+ + V E+ S ET + EE
Sbjct: 417 LSPNLPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQTSGSSGDDDGDDEE 476
Query: 514 FKAKLKELLR-------DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
+ L +++ ++ A + E K +L WK+ YY+ KF + EE
Sbjct: 477 GQIALLRVMKRYENAKVKETTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWGM-DNHEEM 535
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
R+ + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+LG PF PF
Sbjct: 536 RQ-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLGQPFHPF 594
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE
Sbjct: 595 EQLMGVLPDRSKQIVPSAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDE 654
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLL + +H LT EE RN + F
Sbjct: 655 KRLLSAMATKKHLLTPEENARNEFGVTLKFT 685
>gi|302416751|ref|XP_003006207.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261355623|gb|EEY18051.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 1383
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 276/743 (37%), Positives = 397/743 (53%), Gaps = 113/743 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ VI E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQVIAEN-------RIP-----------EFDALYLDMNGIIH 41
Query: 61 PCFHP---EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H ED + +E+F +F+YI+ LF ++P+KL YMAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFYMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E R++ ++G ++P ++ FDSN ITPGTEFMA LS L+Y+
Sbjct: 102 RFRTALDA-------ENAREKAIKDGVEMPKEAP---FDSNCITPGTEFMAKLSRQLKYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
++ ++ D W++ +++LS VPGEGEHKIM Y+R + P YD N RHCLYGLDADLI
Sbjct: 152 VNKKVTEDADWQECEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDTNVRHCLYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+ +K K+ E + +
Sbjct: 212 MLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEHQN----- 246
Query: 298 PKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
+ LH+ +REYLD EF+ I N P+ DLE ++DDFI M FF+GNDFLPH+
Sbjct: 247 ----FYLLHLCIVREYLDLEFQELKQDGILNFPY--DLERVIDDFILMGFFIGNDFLPHL 300
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P L I EGA+ + +YK GY+ +G +L+R++ + E + QK A
Sbjct: 301 PRLHINEGALAYMFRIYKSILPECDGYINEGGVINLQRLQPMVPIEAISEQQ--QKNAAQ 358
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
++ + + AQ D + +P + P+P P LD
Sbjct: 359 SKQRGKGVVMTSAQR---DLWKNYIKP-------------YLTKPTPEP---------LD 393
Query: 472 NGKGTSGRPHK-VPRLSSGATIGAAIVEAENSFE----TDPQENKEEFKA-----KLKEL 521
G + K V L+ + + E ++ T PQ + L +
Sbjct: 394 LGTELNAADRKFVQDLADAVHVDWSTKEDDDGHRHLILTSPQSEDNNEEEEEGTLALFRV 453
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEEREETRKDVVLRY 574
+++ A D +D + +K++Y Y +KF P+ ++ + Y
Sbjct: 454 MKNYDKATVVDITADDAKQHYADLYKQKYQGWKTKYYLQKFEDWAPDNYDKELTALCENY 513
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
+GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG PF+P+ QL+GV P
Sbjct: 514 VQGLQWVLYYYYRGIASWPWFYAYHYSPLTSDVIKGLGADLNFKLGQPFRPYEQLMGVLP 573
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
S +P Y LMT+P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLLD +
Sbjct: 574 DRSKSIVPTVYWDLMTNPKSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMG 633
Query: 695 KIEHTLTEEEARRNSIMADMLFV 717
+ L+++E RN + F
Sbjct: 634 PVNEELSDDEKSRNQFGVSLKFT 656
>gi|295657260|ref|XP_002789200.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284447|gb|EEH40013.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1445
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 287/753 (38%), Positives = 410/753 (54%), Gaps = 101/753 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTAYDA--EVAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFEA----EY 357
Query: 414 RHAERIKRE-KAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 470
A IK + K ++ EP +++ ++ P + +R+ S P L
Sbjct: 358 SDARWIKSKVKGGGLEKENPEPSQISKEFTISPAQKHIFNRIRKYVSHHPVNDQGKPVPL 417
Query: 471 DNGKGTSGRPHK-VPRLSSGATIGAAIVE------------------AENSFETDPQENK 511
D R K V +L+ + V A +F D EN+
Sbjct: 418 DLSSNLPARDRKFVEQLADDLHLQWTTVSNEHGDRFLRVQLPSREDPANGNFGEDDDENE 477
Query: 512 EEFKAKLKELLR-------DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEERE 564
E+ + L ++R ++ A + E K +L WK YY+ KF + E
Sbjct: 478 EDGQIALLRVMRRYENAKVKETTAEEAQQAAEKKYELKFQEWKNNYYKSKFRWGM-DNHE 536
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 624
E RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+LG PF
Sbjct: 537 EMRK-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFDLGQPFH 595
Query: 625 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 684
PF QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFI
Sbjct: 596 PFQQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMDWEAVVKIPFI 655
Query: 685 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+E RLL + EH LT EE RN + F
Sbjct: 656 EEKRLLKAMATKEHLLTPEEKARNEFGVTLKFT 688
>gi|60677951|gb|AAX33482.1| RE02462p [Drosophila melanogaster]
Length = 519
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/432 (53%), Positives = 289/432 (66%), Gaps = 3/432 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KYP V+ + E + V D G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDPTLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E R+R+E G KLPP K + FDSN ITPGT FM LS L Y++
Sbjct: 121 RAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H R NN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIM
Sbjct: 181 HDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C GH C G + K D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGA 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 300 EVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 359
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA++ L+ +YKK GYLTD +L RV+ + +G+ ED+IF+ R R ++ R
Sbjct: 360 GAVDRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKAR 419
Query: 419 IKREKAQARRGD 430
K K Q R D
Sbjct: 420 DKARKRQERNQD 431
>gi|397628044|gb|EJK68715.1| hypothetical protein THAOC_10078 [Thalassiosira oceanica]
Length = 1579
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 276/717 (38%), Positives = 374/717 (52%), Gaps = 128/717 (17%)
Query: 6 FYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHP 65
FYRWL+E+YP + V+ + +P E+D+LYLDMNGIIH C HP
Sbjct: 63 FYRWLSERYPKI-------NQVITNEALLP-----------EFDHLYLDMNGIIHGCTHP 104
Query: 66 E--DRPAPTTFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAS 122
D T ++ + Y+DR+ +V+P+ ++MAIDGVAPRAK+NQQRSRRFR++
Sbjct: 105 NHLDVSDVLTERDMVLGIMHYLDRIITQIVKPKVSVFMAIDGVAPRAKLNQQRSRRFRSA 164
Query: 123 KDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL 182
KD A++ E +RLR + P + FDSN ITPGTEF+ +S ++Y+I ++
Sbjct: 165 KDLAEATKEAQRLRPIDGAD-----PDPYAGAFDSNCITPGTEFLLRISNCIRYFIRKKI 219
Query: 183 NNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALA 242
DP W + VI S VPGEGEHKIM ++R RN GY PNTRHC+YG DADLIML L
Sbjct: 220 KEDPLWRNLSVIFSGPEVPGEGEHKIMQHIRDMRNQLGYRPNTRHCMYGQDADLIMLGLV 279
Query: 243 THEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPY 302
+HE HF++LRE++ G + A ++ +F ++ D +
Sbjct: 280 SHEPHFTLLREIIDFSGGFGR--------------NDNALKEVKKFTKQSD--------F 317
Query: 303 QFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAIN 362
Q LH+ LREYL+ EF + DLE I+DDF+FM F VGNDFLPHMPTL+I +GA
Sbjct: 318 QLLHLSILREYLEIEFAYQHDQSTYDLERIIDDFVFMTFLVGNDFLPHMPTLDIGDGAFT 377
Query: 363 LLMAVYKKEFRALGG--YLTD-GSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
LL Y+++ G YLTD G P+ R+E F++ +G+ E IF++RA+ E +
Sbjct: 378 LLFDTYREQRARWGNGQYLTDSGEIPNPARLEAFLKVIGAAETEIFEERAK-----NEVV 432
Query: 420 KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGR 479
R+K + R D G S
Sbjct: 433 MRKKQR-------------------------------------------RWDKRDGKSSM 449
Query: 480 PHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
P + I E E S ++D + A ++ ++ D S + +V
Sbjct: 450 PSDL-----------EIAEVEASKQSD-------YNAMVRSMMADVSSGTQVVEGWK-QV 490
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLR--YTEGLCWVMHYYYEGVCSWQWFYP 597
E K RYY EK K + + LR Y EGL W + YYY G SW WF+P
Sbjct: 491 GESEKDHKGRYYYEKLQLKP----VDIAGHLALRKSYIEGLIWCLAYYYRGCISWGWFFP 546
Query: 598 YHYAPFASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YHY P SDL +L +I FE+G P KPF QL+G P ASS +P YR+LM+ P SP
Sbjct: 547 YHYGPMISDLTNLPAVFQSIRFEIGQPLKPFEQLMGCLPPASSALVPRIYRQLMSSPESP 606
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEEARRNSI 710
I +YP F VDMNGKR W+G+ LPFID RL D +K + LT EE RN +
Sbjct: 607 IKQYYPNSFVVDMNGKRNPWEGVNILPFIDANRLKDAIKDNCPDRLLTAEERNRNRV 663
>gi|254571103|ref|XP_002492661.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|238032459|emb|CAY70482.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|328353336|emb|CCA39734.1| 5'-3' exoribonuclease 1 [Komagataella pastoris CBS 7435]
Length = 1451
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 285/786 (36%), Positives = 421/786 (53%), Gaps = 117/786 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P++ ++ IE+ + E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMI-SEPIEDSQIA------------------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPTTFDE-VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H D +E +F +F YI+ LF +++P K +MAIDGVAPRAKMNQQRSRRF
Sbjct: 42 NCTHSNDGSVDLMKEEEMFSAIFAYIEHLFTLIKPGKTFFMAIDGVAPRAKMNQQRSRRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R + +A S E ++ + K ++ FDSN ITPGTEFMA ++ L+++IH
Sbjct: 102 RTAIEAEKSV--------EIAQKNGLITSKDEN--FDSNCITPGTEFMAKVTTNLKFFIH 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++++D W+K++VILS VPGEGEHKIM Y+R + GYDPNTRHC+YGLDADLIML
Sbjct: 152 QKISSDAKWQKVQVILSGHEVPGEGEHKIMDYIRFLKAQEGYDPNTRHCIYGLDADLIML 211
Query: 240 ALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L H+ HF+ILR EVVF G KA D V
Sbjct: 212 GLVIHDPHFAILREEVVFGRGS-----------------------KASSTD-------VS 241
Query: 299 KKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
++ + LH+ LREYL EF+ F+ DLE I+DDFIF+ + +GNDFLP++P L I
Sbjct: 242 EQQFYLLHLSLLREYLALEFKDLEDQIKFDYDLERILDDFIFIMYVIGNDFLPNLPDLHI 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQ 413
+GA L+A K+ GYL +G ++ R ++ + +E + F++
Sbjct: 302 NKGAFPRLLATIKETMIDSDGYLQEGGVINMERFGLWLDHLSQFELQNFEQVDVDVEWFN 361
Query: 414 RHAERI------KREKAQ----ARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 463
+ E I KRE+A RR ++ +P L F+ SR S +
Sbjct: 362 KQLENISLDGERKRERAGRKLLLRRQQELISKLRPWIL----EFYSSR---DNIYSAHDD 414
Query: 464 SECVGRLDNGKGTSGRPHKVPRLSSGAT-IGAAIV--EAENSFET-------DPQENKEE 513
+ L K+P + A +G IV +++N++ + E+ EE
Sbjct: 415 DSLIPTLQLDTELMEEEIKLPFIKQFALDVGFFIVHSKSQNTYHAKIDIDGINVNESDEE 474
Query: 514 FKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNAKTPEERE 564
F+A++ +R K + + ED+ L E WK +YY+EKF T + E
Sbjct: 475 FEARVL-YIRKKIKEYENSIFVEDENTLEEQKNIYDTKFVNWKNKYYKEKFGF-TLSDTE 532
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 624
+ K + Y +GL WV+ YYY GV SWQW+YPY+YAP SD+K + + F+ G PFK
Sbjct: 533 DILK-LTESYIQGLQWVLFYYYRGVPSWQWYYPYYYAPRISDIKLGIKACLEFDKGTPFK 591
Query: 625 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 684
PF QL+ V P+ S +P YR LMTDPNSPI +FYP + E+D NGK SW+ + K+ F+
Sbjct: 592 PFEQLMAVLPARSKQLVPACYRPLMTDPNSPIIEFYPDEVEIDKNGKTASWEAVVKINFV 651
Query: 685 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT----------LDEHC 734
DE RLL+ ++ L EE +RNS+ ++ F HP +++ ++HC
Sbjct: 652 DEKRLLEALEPYNSKLNAEERQRNSLGTNIEFSY--HPQVNQVHSSPIPTIFPDITEDHC 709
Query: 735 KQLKIK 740
++ ++
Sbjct: 710 YEIVVE 715
>gi|225684905|gb|EEH23189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1445
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 280/751 (37%), Positives = 406/751 (54%), Gaps = 97/751 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-RDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q G ++P ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTAYDA--EVAKEKAIKQ-----GIEMPKEA---AFDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+ +
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFEAEYSDAR 361
Query: 414 RHAERIKREKAQARRGD-DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
+IK ++ RG+ + +++ ++ P + +R+ S P LD
Sbjct: 362 WIKSKIK--CGESERGNPEPSQISKEFTISPAQKQIFNRIKKYVSHHPVNDQGKPVPLDL 419
Query: 473 GKGTSGRPHK-VPRLSSGATIGAAIVEAENS---------FETDPQENKEEF-------- 514
R K V +L+ + V E+ + DP
Sbjct: 420 SSNLPARDRKFVEQLADDLHLQWTTVSNEHGDRFLRVQLPSKEDPANGNSGEDDDENEEE 479
Query: 515 -KAKLKELLRDKSDAFNSDNPEEDKVKLGEPG-------WKERYYEEKFNAKTPEEREET 566
+ L ++R +A + E+ + E WK YY+ KF + EE
Sbjct: 480 GQIALLRVMRRYENAKVKETTAEEAQQAAEKKYERKFQEWKNNYYKSKFRWGM-DNHEEM 538
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+LG PF PF
Sbjct: 539 RK-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFDLGQPFHPF 597
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFI+E
Sbjct: 598 QQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMDWEAVVKIPFIEE 657
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLL + EH LT EE RN + F
Sbjct: 658 KRLLKAMATKEHLLTPEEKARNEFGVTLKFT 688
>gi|291220730|ref|XP_002730377.1| PREDICTED: rCG25308-like [Saccoglossus kowalevskii]
Length = 2104
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 263/753 (34%), Positives = 390/753 (51%), Gaps = 118/753 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V+ E +IP E+DNLYLDMNG+IH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVREN-------QIP-----------EFDNLYLDMNGVIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F+ +F YI+ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 VCSHPNDDDPHFRISEEKIFKDIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR+++ AAEE+ ++ +G LP + + FDSN ITPGTEFM L+ L+Y++
Sbjct: 102 FRSAR-----AAEEQE--KKALSKGETLPTE---KRFDSNCITPGTEFMVKLNEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ ++ D W +++ LS PGEGEHK+M ++R ++ P YDPNTRHCLYGLDADL+M
Sbjct: 152 NKKITEDEMWRGLRIYLSGHETPGEGEHKVMEFIRAEKADPKYDPNTRHCLYGLDADLMM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V F +K + P
Sbjct: 212 LGLTSHEPHFSLLREEV-------------------------------RFGKKSQQKRTP 240
Query: 299 ---KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ + LH+ REYL++EF+ F+ DLE I+DD++ M F VGNDF+PH+P
Sbjct: 241 TPEETTFHLLHLSLFREYLEFEFQDVKGKISFDYDLERIIDDWVLMGFLVGNDFIPHLPD 300
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I A+ LL Y + + GYL + +L+R E +++ + ++ F + +
Sbjct: 301 LHINHDALPLLYKTYIEVLPLVDGYLNEDGILNLKRFEVYLKKLSEFDRNKFSETS---- 356
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
V + F G + ++ G G
Sbjct: 357 ----------------------------VDLKYFEGKKGSTE------------GSAWKG 376
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
+ R K L + + A + S + +++ + E L D+ ++D
Sbjct: 377 QRIKKREEKKEALRAAKNLAQASMFQVLSTTEESEDSSDNGNKNSVETLFDEETKLDADV 436
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
E + ++ K YY+ K + EE KD L Y G+ W++HYYY GV SW
Sbjct: 437 DEAEIFEMEFRQHKRNYYQTKLGYEN--VTEEVLKDQALCYVTGIQWILHYYYNGVQSWG 494
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
W+YP+HYAPF SD+ + +++G PFKPF QLL V P+AS LP+ ++ LM N
Sbjct: 495 WYYPHHYAPFMSDVCGFSDCELKYDIGRPFKPFEQLLAVLPAASGELLPKPFQSLMIMDN 554
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI ++YP DF+ D+NGK+ W+ + +PFIDE LLD + + + LT+EE RRNS
Sbjct: 555 SPIIEYYPVDFDTDLNGKQQDWEAVVLIPFIDEKCLLDAMAPLNNILTDEEKRRNSHGPH 614
Query: 714 MLFVL-----LSHPLSASIYTLDEHCKQLKIKE 741
+L+ +P S D +C K +E
Sbjct: 615 LLYTYDKELSFCYPSSLPGVFTDINCSHAKCEE 647
>gi|321260270|ref|XP_003194855.1| strand exchange protein (5'-3' exoribonuclease) [Cryptococcus
gattii WM276]
gi|317461327|gb|ADV23068.1| Strand exchange protein (5'-3' exoribonuclease), putative
[Cryptococcus gattii WM276]
Length = 1129
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/443 (51%), Positives = 303/443 (68%), Gaps = 16/443 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-----VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V V E+ P I G V+ P+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE RPAP T +E+ +F Y +R+ M RPRK+L MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIAL 174
SRRFRA+++AAD E + + FE G + ++ + + +D+N ITPGT FM +LSI+L
Sbjct: 121 SRRFRAAQEAADKEEERKEAVKLFEAMGHTVSEETANRKSWDTNAITPGTPFMDLLSISL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y++ +L DPGW+ +K+ILSD++VPGEGEHKIM ++R QR+ P +D NT H +YGLDA
Sbjct: 181 KYWVSYKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DLIML+LATHE HF +LRE VF + C CG+ GH+AANC+G K K D
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKGDKKVK----DPNV 296
Query: 293 DEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGNDFLPH
Sbjct: 297 VEVAKTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGNDFLPH 356
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + ++ + ED IFQKR
Sbjct: 357 LPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKD 416
Query: 411 LHQR--HAERIKREKAQARRGDD 431
+R H+++ +R + R+ +D
Sbjct: 417 DEERQEHSQKRRRIEEHKRQDED 439
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 156/250 (62%), Gaps = 15/250 (6%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED +KL EPG++ERYYE+KF K ERE K V Y EGLCWV+ YYY+GV +W WF
Sbjct: 688 EDDIKLWEPGYRERYYEKKFGVKL-SEREFIDK-VTKSYMEGLCWVLEYYYQGVPAWDWF 745
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA D + + +I FE PFKPF QLLGVFP+AS LPE + LM D +SP
Sbjct: 746 YPYHYAPFAQDFRSVGSMDIKFETSMPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSP 805
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRNS +++
Sbjct: 806 ILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVM 865
Query: 716 FVLLSHPLSASIYTLDEHCKQ---LKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPV 772
F+ +PL D C + L+ K+ + + + S GM G + P
Sbjct: 866 FIANENPL------YDLFCDKLYGLRAKDPIPIDTK----ASYGMTGSVLPDPNCVPAST 915
Query: 773 FRSPVASMED 782
F +P+ S+ +
Sbjct: 916 FDTPIPSISE 925
>gi|156537119|ref|XP_001603129.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Nasonia
vitripennis]
Length = 1739
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/728 (35%), Positives = 368/728 (50%), Gaps = 138/728 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYPCLSEKLKE--------YQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D A T + +F+ +F YI+ LF +++P+KL +MA+DGVAPRAK+NQQR RR
Sbjct: 42 NCSHPNDADATFRITEETIFKNIFHYIEILFRIIQPQKLFFMAVDGVAPRAKINQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+K+A A+ QE +E R FDSN ITPGT FM+ L+ L+Y+I
Sbjct: 102 FRAAKEAEVLEAKARAKGQEIPKEAR----------FDSNCITPGTVFMSKLNEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K K+ILS + VPGEGEHKIM Y+R + P Y+ NTRHCLYGLDADLIM
Sbjct: 152 TYKISTDKLWQKCKIILSGSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V +F + +++ P
Sbjct: 212 LGLCSHEPHFSLLREEV-------------------------------KFGKTQKKILTP 240
Query: 299 KKP-YQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REYL++EF F+ D+E I+DD++ M F VGNDF+PH+P L
Sbjct: 241 EETNFCLLHLSLMREYLEHEFSPVKDKLTFKFDIEKIIDDWVLMGFLVGNDFIPHLPNLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE----DRIFQKRARL 411
I GA+ LL Y L GY+ + +L R E F++ +G Y+ D I+
Sbjct: 301 IENGALPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLGKYDLEQFDEIYADLKFF 360
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ R+ + ++ D
Sbjct: 361 EAKTGRRLNESERNSKNSPD---------------------------------------- 380
Query: 472 NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNS 531
+ P K + + A I+ EN D E+ L +SD+
Sbjct: 381 ----ENASPKK-----TNKALNALIMATENELGADSDED-----------LEGESDS--- 417
Query: 532 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 591
+ +++L K YY K + ET + Y + W +HYYY G CS
Sbjct: 418 ----DTEMQLEFVQHKRDYYMNKMEYANVD--AETMRSQAEGYIRAIQWNLHYYYNGCCS 471
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W W+YP+HYAPF SD+K+ + F+LG PFKPF QLL V P+AS LP Y LMT+
Sbjct: 472 WSWYYPHHYAPFISDIKNFKDLKLEFDLGEPFKPFEQLLAVLPAASKSLLPTAYHGLMTE 531
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
SPI +YP DF+ D+NGK+ W+ + +P IDE LL +K LT EE +RNS
Sbjct: 532 EKSPIIKYYPLDFKTDLNGKKQEWEAVVLIPLIDEKSLLKAMKPCNAKLTPEERKRNSHG 591
Query: 712 ADMLFVLL 719
+F +
Sbjct: 592 PMSIFTFI 599
>gi|402082044|gb|EJT77189.1| 5'-3' exoribonuclease 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1452
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 274/744 (36%), Positives = 393/744 (52%), Gaps = 92/744 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPE--DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + D + +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTHDTSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ R + EG++LP + + FDSN ITPGT FMA LS L+Y++
Sbjct: 102 FRTALDA-------EQARDKAISEGKELPKE---EPFDSNCITPGTAFMAKLSEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLYGLDADLIM
Sbjct: 152 NKKVSEDKEWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYNDNVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q + K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQSQA-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLLHLCIVREYLELEFQELKKEGAMSFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
I EGA+ L+ +YK+ GY+ +G +L R+ ++ + E R F
Sbjct: 303 HINEGALALMFKLYKQILPKCDGYINEGGTVNLHRLGLLLEGLSEAEHRFFDV-----DM 357
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
E R K Q + ++P + V+ + S P+ L+ G
Sbjct: 358 QNENWYRAKQQMDNPETAMAKSRPKGQLQVTTSQKNIWKH--SLRPFINKRATKTLNLGS 415
Query: 475 GTSGRPHKVPRLSSGA-------------TIGAAIVEAENSFETDPQENKEEFKAKL-KE 520
G + K + + + I ++ +D +EE A +E
Sbjct: 416 GLNAADRKFAQEVADSFRLKWESPADEEGNRSLVITLPQSPEASDDDGFEEEGNAAAHRE 475
Query: 521 LLRDKSDAFNSDNPEEDKVKLGE------PGWKERYYEEKFNA-KTPEEREETRKDVVLR 573
+L+ A +PEE K + WK++YY EKF TPE +EE + +
Sbjct: 476 MLKYDRAAVVDTSPEEAKEAMERLYQQKFQEWKDKYYSEKFEEWSTPELKEEGLRQLCEN 535
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y +GL WV++YYY G+ SW WFY YHY+P SD+ +++F+LG PF+PF QL+GV
Sbjct: 536 YVQGLQWVLYYYYRGIRSWPWFYKYHYSPMISDVMKGLNADMNFKLGQPFRPFEQLMGVL 595
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S +P Y LMT +SPI DFYP DF +DMNGK+ W+ + K+PFIDE RLLD +
Sbjct: 596 PDRSKKIVPTVYWPLMTQADSPIIDFYPRDFVLDMNGKKQDWEAVVKIPFIDERRLLDAM 655
Query: 694 KKIEHTLTEEEARRNSIMADMLFV 717
L ++E RN + F
Sbjct: 656 ATKNDLLADDEKARNGFGVALKFT 679
>gi|345479163|ref|XP_003423891.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Nasonia
vitripennis]
Length = 1682
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/728 (35%), Positives = 368/728 (50%), Gaps = 138/728 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYPCLSEKLKE--------YQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D A T + +F+ +F YI+ LF +++P+KL +MA+DGVAPRAK+NQQR RR
Sbjct: 42 NCSHPNDADATFRITEETIFKNIFHYIEILFRIIQPQKLFFMAVDGVAPRAKINQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+K+A A+ QE +E R FDSN ITPGT FM+ L+ L+Y+I
Sbjct: 102 FRAAKEAEVLEAKARAKGQEIPKEAR----------FDSNCITPGTVFMSKLNEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K K+ILS + VPGEGEHKIM Y+R + P Y+ NTRHCLYGLDADLIM
Sbjct: 152 TYKISTDKLWQKCKIILSGSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V +F + +++ P
Sbjct: 212 LGLCSHEPHFSLLREEV-------------------------------KFGKTQKKILTP 240
Query: 299 KKP-YQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REYL++EF F+ D+E I+DD++ M F VGNDF+PH+P L
Sbjct: 241 EETNFCLLHLSLMREYLEHEFSPVKDKLTFKFDIEKIIDDWVLMGFLVGNDFIPHLPNLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE----DRIFQKRARL 411
I GA+ LL Y L GY+ + +L R E F++ +G Y+ D I+
Sbjct: 301 IENGALPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLGKYDLEQFDEIYADLKFF 360
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ R+ + ++ D
Sbjct: 361 EAKTGRRLNESERNSKNSPD---------------------------------------- 380
Query: 472 NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNS 531
+ P K + + A I+ EN D E+ L +SD+
Sbjct: 381 ----ENASPKK-----TNKALNALIMATENELGADSDED-----------LEGESDS--- 417
Query: 532 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 591
+ +++L K YY K + ET + Y + W +HYYY G CS
Sbjct: 418 ----DTEMQLEFVQHKRDYYMNKMEYANVD--AETMRSQAEGYIRAIQWNLHYYYNGCCS 471
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W W+YP+HYAPF SD+K+ + F+LG PFKPF QLL V P+AS LP Y LMT+
Sbjct: 472 WSWYYPHHYAPFISDIKNFKDLKLEFDLGEPFKPFEQLLAVLPAASKSLLPTAYHGLMTE 531
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
SPI +YP DF+ D+NGK+ W+ + +P IDE LL +K LT EE +RNS
Sbjct: 532 EKSPIIKYYPLDFKTDLNGKKQEWEAVVLIPLIDEKSLLKAMKPCNAKLTPEERKRNSHG 591
Query: 712 ADMLFVLL 719
+F +
Sbjct: 592 PMSIFTFI 599
>gi|226294212|gb|EEH49632.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1445
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 279/751 (37%), Positives = 405/751 (53%), Gaps = 97/751 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-RDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q G ++P ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTAYDA--EVAKEKAIKQ-----GIEMPKEA---AFDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+ A
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGILLDSLSDVEFRFFE--AEYSD 359
Query: 414 RHAERIKREKAQARRGD-DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
+ K + + RG+ + +++ ++ P + +R+ S P LD
Sbjct: 360 ARWIKSKIKCGELERGNPEPSQISKEFTISPAQKQIFNRIKKYVSHHPVNDQGKPVPLDL 419
Query: 473 GKGTSGRPHK-VPRLSSGATIGAAIVEAENS---------FETDPQENKEEF-------- 514
R K V +L+ + V E+ + DP
Sbjct: 420 SSNLPARDRKFVEQLADDLHLQWTTVSNEHGDRFLRVQLPSKEDPANGNSGEDDDENEEE 479
Query: 515 -KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGW-------KERYYEEKFNAKTPEEREET 566
+ L ++R +A + E+ + E + K YY+ KF + EE
Sbjct: 480 GQIALLRVMRRYENAKVKETTAEEAQQAAEKKYERKFQEWKNNYYKSKFRWGM-DNHEEM 538
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
RK + Y +GL WV++YYY GV SW WFY YHY+P SD+K + +++F+LG PF PF
Sbjct: 539 RK-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFDLGQPFHPF 597
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
QL+GV P S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFI+E
Sbjct: 598 QQLMGVLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMDWEAVVKIPFIEE 657
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLL + EH LT EE RN + F
Sbjct: 658 KRLLKAMATKEHLLTPEEKARNEFGVTLKFT 688
>gi|403416696|emb|CCM03396.1| predicted protein [Fibroporia radiculosa]
Length = 1140
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/434 (50%), Positives = 299/434 (68%), Gaps = 21/434 (4%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVIDGVK-----IPVDTSKPNPNGLEYDNLYLDMN 56
GVPA +RWL++KYP ++ V+EEE I V+ IP+D S+PNPN +E+DNLYLDMN
Sbjct: 9 GVPALFRWLSKKYPKIILPVVEEEESKIPDVEGNEVVIPIDISRPNPNDMEFDNLYLDMN 68
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
I+HPC HPE +PAP T +E+ +F Y +RL MVRPR+LL+MA+DGVAPRAKMNQQRS
Sbjct: 69 NIVHPCTHPEGKPAPETEEEMMLEVFKYTERLVNMVRPRRLLFMAVDGVAPRAKMNQQRS 128
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQ 175
RRFR+S++A D + +E G+ L + + + +DSN ITPGT FM +L+ +L+
Sbjct: 129 RRFRSSQEAKDKEEAHKEAIAMWEAMGKTLSEEEKNKKSWDSNAITPGTPFMDLLASSLR 188
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ ++N DPGW +++VI+SDANVPGEGEHKIM ++R QR+ PG+DPNTRH +YGLDAD
Sbjct: 189 YWVAHKMNTDPGWSQLQVIISDANVPGEGEHKIMEFIRRQRSNPGHDPNTRHVIYGLDAD 248
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML+LATHE +F +LRE V F G + C +CGQ GH AA C G+ E
Sbjct: 249 LIMLSLATHEPYFRVLREDVFFQEGSRTACRICGQEGHYAAQCTGQKA-----------E 297
Query: 295 VVVP---KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
+ P KKPY FL + LREYL+ E +P+ PF +LE +DD++F+ FFVGNDFLPH+
Sbjct: 298 ISKPPPEKKPYVFLDVAILREYLEAELNLPHAPFPFNLEQAIDDWVFLIFFVGNDFLPHL 357
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P+LEIREGAI+ L+ ++++E +GGYLT+ + L R ++ + ED IF++R
Sbjct: 358 PSLEIREGAIDTLLRIWREELPRMGGYLTNHGQVELSRAHIILEGLAQREDDIFRRRREA 417
Query: 412 HQRHAERIKREKAQ 425
+R KR K Q
Sbjct: 418 EERQDHEAKRRKIQ 431
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 150/229 (65%), Gaps = 9/229 (3%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
+ED VKL EPG++ERYY +KF + + E RK V Y EG+ WV+ YYY+G SWQW
Sbjct: 669 QEDFVKLWEPGYQERYYRQKFGVEYGDV--EFRKKVAKHYIEGMAWVLQYYYQGTPSWQW 726
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
+YPYH+APFASD K +I F+ G PFKPF QL+ VFP+AS H +P+ + +LMT+ +S
Sbjct: 727 YYPYHFAPFASDFKTAQNMSIKFDPGQPFKPFEQLMSVFPAASRHLIPKVFHELMTEESS 786
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYP+ F++DMNGK+ +WQG+A LPFIDE RLLD + LT+EE RRN ++
Sbjct: 787 PIIDFYPSTFQIDMNGKKMAWQGVALLPFIDERRLLDAMTPRYSNLTDEEKRRNKWGNNV 846
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 763
L+V H L S+ + L K + + ++P+ S G+NG + P
Sbjct: 847 LYVFEEHSLYPSL-------EALYGKRKTDEPMPVDPKASKGINGSLLP 888
>gi|195457130|ref|XP_002075439.1| GK17975 [Drosophila willistoni]
gi|194171524|gb|EDW86425.1| GK17975 [Drosophila willistoni]
Length = 1638
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/713 (36%), Positives = 382/713 (53%), Gaps = 126/713 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREHC-------IP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTF----DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C HP+D A F D++FQ +F+Y+++LF +++P+KL ++++DGVAPRAKMNQQRS
Sbjct: 42 NCSHPDD--ANIHFHLEEDQIFQDIFNYVEKLFHLIKPQKLFFLSVDGVAPRAKMNQQRS 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFR +++A ++ E + + K + FDSN ITPGT FM L +AL+
Sbjct: 100 RRFRTAREA-----------EQLETKASQRGEKRQHERFDSNCITPGTVFMERLQLALRS 148
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ +++ DP W+K +VILS PGEGEHKIM Y+R ++ P +DPNTRHCLYGLDADL
Sbjct: 149 FLRTKISLDPLWQKCRVILSGEETPGEGEHKIMDYIRYLKSQPNFDPNTRHCLYGLDADL 208
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L THE+HF +LRE V +F
Sbjct: 209 IILGLCTHELHFVVLREEV-------------------------------KFGRNVKRAT 237
Query: 297 VPKKPYQFLHIWTLREYLDYEFR-IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+P++P L
Sbjct: 238 LEETRFYLLHLGLLREYLELEFNELSTKEKKLDVAQLIDDWVLMGFMVGNDFIPNLPCLH 297
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I A+ LL Y + + LGG + + K +LRR++ F+ A+ E + F+ H
Sbjct: 298 ISSNALPLLYKTYIQVYPQLGGNINERGKLNLRRLQIFMTALSEVELQQFED-------H 350
Query: 416 AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKG 475
+ +K A+ D V VS + A+G S + S+ V +DN
Sbjct: 351 FDDLKYMNAKTEAFD-----------VDVSEIQSAS-ANGESFN----SDLVALIDNSMK 394
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S E D F L + D + F E
Sbjct: 395 ASS-------------------------EID-------FIITLYDYDSDDEEHFEDLTDE 422
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
++ +K YY KF E + + +++ Y L W++ YYY GV SW W+
Sbjct: 423 ASSLRHEFQNYKRNYYRNKFKR---EMKGDLVEELTHHYITALQWILDYYYRGVQSWDWY 479
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YP+HYAPF SDLK+++ I F+LG PF PF QLL V P+ASS LP Y LM +P+S
Sbjct: 480 YPFHYAPFISDLKNIENVKIHFQLGRPFLPFQQLLAVLPAASSKLLPIAYHDLMLNPDSA 539
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+++FYPT+FE D+NGK++ W+ + +PFIDE RLL+ ++ E+ LT E RN
Sbjct: 540 LAEFYPTEFESDLNGKKHDWEAVVLIPFIDERRLLEAMRPCENCLTTAERSRN 592
>gi|400601005|gb|EJP68673.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 1398
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 272/748 (36%), Positives = 393/748 (52%), Gaps = 93/748 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPPISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTF----DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C H +D TTF +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+
Sbjct: 42 NCTH-KDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRA 100
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFR +A E E+ R++ +EG ++P + + FDSN ITPGTEFMA LS LQY
Sbjct: 101 RRFR-------TALEVEKAREKAIKEGVEMPKE---EPFDSNCITPGTEFMAKLSRQLQY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+++ +++ D W+ +++LS VPGEGEHKIM Y+R ++ PGY+ N RHCLYGLDADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKSQPGYNSNVRHCLYGLDADL 210
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML L +H+ HFS+LRE V T G+ +K K+ E + +
Sbjct: 211 IMLGLLSHDPHFSLLREEV-TFGR-------------------ASKNKSKELEHQN---- 246
Query: 297 VPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ LH+ +REYL+ EF+ + FE DLE ++DDFI M FFVGNDFLP++P
Sbjct: 247 -----FFLLHLCMVREYLEMEFQELKHQQDLGFEFDLERVIDDFILMAFFVGNDFLPNLP 301
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
L I EGA+ + +YK+ GGYL + +++R I + E + F+
Sbjct: 302 GLHINEGALADMFEIYKRVLPEEGGYLHENGVLNIKRALRMIAELSKVELKQFEHDIADE 361
Query: 413 QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
+ A + +K Q ++ + + R PY LD
Sbjct: 362 KWFASKQMEKKLQNTTAASKAKTSKSGQRIITTT---QRDLWKQKIRPYVSKRSNDALDL 418
Query: 473 GKGTSGRPHKVPR-LSSGATIGAAIVEAENSFE----TDPQENKEEFKAKLK-------- 519
G S K + ++ + + E +N F + P ++ + +
Sbjct: 419 GVELSAADKKFAQEIADAMHLDWSTKEDDNGFRHLIISYPPKSAGDHHDDEEGEEEEGNL 478
Query: 520 ---ELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEEREETRKD 569
++R A ++ E + E ++E+Y Y +KF E + +
Sbjct: 479 AAYRVIRTYDKAVVVNDSSEASQEEYEKLYQEKYQAWKTKYYLQKFPEWESTAYAEEQTN 538
Query: 570 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 629
+ Y EGL WV+ YYY G+ SW WFY YHYAP SD+ + FE G PFKP+ QL
Sbjct: 539 LCENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLISDVVKGSNAKLVFEKGQPFKPYEQL 598
Query: 630 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+GV P S +P Y LMT+ +SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RL
Sbjct: 599 MGVLPDRSKKIVPTAYHDLMTNSSSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRL 658
Query: 690 LDEVKKIEHTLTEEEARRNSIMADMLFV 717
L ++ L+++E RN + F
Sbjct: 659 LAAMETKNALLSDDEKSRNGFGVPLKFT 686
>gi|298713655|emb|CBJ33698.1| putative 5\'-3\' exoribonuclease (XRN3) [Ectocarpus siliculosus]
Length = 708
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/419 (55%), Positives = 297/419 (70%), Gaps = 16/419 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWL+EKYP +V D++E+ ++G +IP+D + NPNG+E+DNLY+DMNGIIH
Sbjct: 1 MGVPAFYRWLSEKYPKIVVDMLEDHAARVEGTEIPLDLTAENPNGIEFDNLYIDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P P + +E+++ + DYIDRLF VRPR+LLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKPPPESEEEMYKNIMDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++++A ++A E RQ + G K+PPK+ +DSN+ITPGTEFM LS L++Y+
Sbjct: 121 SAQEAEEAAELMEETRQAMKEMGVKVPPKA-KPAWDSNIITPGTEFMHKLSRYLRFYVQD 179
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N D W+ IKVILSDA+ PGEGEHKIM +VR QR PGYDPN H L+GLDADLIML
Sbjct: 180 RVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRTQPGYDPNQHHILHGLDADLIMLG 239
Query: 241 LATHEVHFSILREVVFTPGQQD-----KCFLCGQPGHLAANCEGKAKR-KAGEFDEKGDE 294
LATHE F+ILRE V QQ K A KAKR + GE D GD
Sbjct: 240 LATHERSFTILREQVLFGRQQKEASERKAAAMNAARDALAGVGQKAKRGEHGEHD--GD- 296
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFR-IPNP---PFEIDLECIVDDFIFMCFFVGNDFLPH 350
V P KP Q L +WTLREYL+ EF+ + P PF D E +VDDF+F+CFFVGNDFLPH
Sbjct: 297 -VSPHKPLQMLQLWTLREYLENEFKELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPH 355
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLT-DGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
+P+L IR+GA++ L VYK+ +LG YLT G + +L++V+ + VG ED +F++R
Sbjct: 356 LPSLGIRDGALDYLFNVYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGEIEDEVFKRR 414
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 511 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 570
K++ K + + LL + D+ N D V+L E GWK+RYY +K + E R+ +
Sbjct: 614 KDKVKDQTQVLLDEARDSVN------DTVRLWEDGWKDRYYHDKCKLEDIEG-GGGRERL 666
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 612
Y EGLCWVM YYY+G SW W++P+HYAPFASDL + D+
Sbjct: 667 FQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 708
>gi|405121347|gb|AFR96116.1| 5'-3' exoribonuclease 2 [Cryptococcus neoformans var. grubii H99]
Length = 1129
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/443 (50%), Positives = 302/443 (68%), Gaps = 16/443 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-----VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V V E+ P I G V+ P+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE RPAP T +E+ +F Y +R+ M RPRK+L MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIAL 174
SRRFRA+++AAD E + + FE G + ++ + + +D+N ITPGT FM +LSI+L
Sbjct: 121 SRRFRAAQEAADKEEERKEAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y++ +L DPGW+ +K+ILSD++VPGEGEHKIM ++R QR+ P +D NT H +YGLDA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DLIML+LATHE HF +LRE VF + C CG+ GH+AANC+ K K D
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKSDKKVK----DPNV 296
Query: 293 DEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGNDFLPH
Sbjct: 297 VEVAKTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGNDFLPH 356
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + ++ + ED IFQKR
Sbjct: 357 LPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKD 416
Query: 411 LHQR--HAERIKREKAQARRGDD 431
+R H+++ +R + R+ +D
Sbjct: 417 DEERQEHSQKRRRLEEHKRQDED 439
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 157/249 (63%), Gaps = 10/249 (4%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED VKL EPG++ERYYE+KF K ERE K V Y EGLCWV+ YYY+GV +W WF
Sbjct: 685 EDDVKLWEPGYRERYYEKKFGVKL-SEREFIDK-VTKSYMEGLCWVLEYYYQGVPAWDWF 742
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA D +D+ +I FE PFKPF QLLGVFP+AS LPE + LM D +SP
Sbjct: 743 YPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSP 802
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRNS +++
Sbjct: 803 ILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVM 862
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKE--RLNPELSDGMNGYISPCAGDPHPPVF 773
F+ +PL D C +L +V + ++ + S G+ G + P F
Sbjct: 863 FIANENPL------YDLFCDKLYGLRAKDVNKPIPIDTKASYGITGSVLPDPNCVPASTF 916
Query: 774 RSPVASMED 782
+P+ S+ +
Sbjct: 917 DTPIPSISE 925
>gi|58268722|ref|XP_571517.1| 5'-3' exoribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819739|sp|P0CL88.1|XRN2_CRYNJ RecName: Full=5'-3' exoribonuclease 2
gi|57227752|gb|AAW44210.1| 5'-3' exoribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1127
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/443 (50%), Positives = 301/443 (67%), Gaps = 16/443 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-----VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V V E+ P I G V+ P+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE RPAP T +E+ +F Y +R+ M RPRK+L MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIAL 174
SRRFRA+++AAD E + FE G + ++ + + +D+N ITPGT FM +LSI+L
Sbjct: 121 SRRFRAAQEAADKEEERREAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y++ +L DPGW+ +K+ILSD++VPGEGEHKIM ++R QR+ P +D NT H +YGLDA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DLIML+LATHE HF +LRE VF + C CG+ GH+AANC+ K K D
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFK----DPNV 296
Query: 293 DEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGNDFLPH
Sbjct: 297 AEVAKTEDPKPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGNDFLPH 356
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + ++ + ED IFQKR
Sbjct: 357 LPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKD 416
Query: 411 LHQR--HAERIKREKAQARRGDD 431
+R H+++ +R + R+ +D
Sbjct: 417 DEERQEHSQKRRRIEEHKRQDED 439
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/250 (47%), Positives = 157/250 (62%), Gaps = 15/250 (6%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED VKL EPG++ERYYE+KF K ERE K V Y EGLCWV+ YYY+GV +W WF
Sbjct: 686 EDDVKLWEPGYRERYYEKKFGVKL-SEREFIDK-VTKSYMEGLCWVLEYYYQGVPAWDWF 743
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA D +D+ +I FE PFKPF QLLGVFP+AS LPE + LM D +SP
Sbjct: 744 YPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSP 803
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRNS +++
Sbjct: 804 ILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVM 863
Query: 716 FVLLSHPLSASIYTLDEHCKQ---LKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPV 772
F+ +PL D C + L+ K+ + + + S G+ G + P
Sbjct: 864 FIANENPL------YDLFCDKLYGLRAKDPIPIDTK----ASYGITGSVLPDPNCVPAST 913
Query: 773 FRSPVASMED 782
F +P+ S+ +
Sbjct: 914 FDTPIPSISE 923
>gi|134113168|ref|XP_774609.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819738|sp|P0CL89.1|XRN2_CRYNB RecName: Full=5'-3' exoribonuclease 2
gi|50257253|gb|EAL19962.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1130
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/443 (50%), Positives = 301/443 (67%), Gaps = 16/443 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG-----VKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V V E+ P I G V+ P+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE RPAP T +E+ +F Y +R+ M RPRK+L MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIAL 174
SRRFRA+++AAD E + FE G + ++ + + +D+N ITPGT FM +LSI+L
Sbjct: 121 SRRFRAAQEAADKEEERREAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y++ +L DPGW+ +K+ILSD++VPGEGEHKIM ++R QR+ P +D NT H +YGLDA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DLIML+LATHE HF +LRE VF + C CG+ GH+AANC+ K K D
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFK----DPNV 296
Query: 293 DEVVVPK--KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
EV + KP+ FL + LREYL E +P PF DLE +DD+IFM FFVGNDFLPH
Sbjct: 297 AEVAKTEDPKPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGNDFLPH 356
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P+LEIREGAI++L+ +++ E +GGYLT+ K +L R + ++ + ED IFQKR
Sbjct: 357 LPSLEIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKD 416
Query: 411 LHQR--HAERIKREKAQARRGDD 431
+R H+++ +R + R+ +D
Sbjct: 417 DEERQEHSQKRRRIEEHKRQDED 439
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 157/249 (63%), Gaps = 10/249 (4%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED VKL EPG++ERYYE+KF K ERE K V Y EGLCWV+ YYY+GV +W WF
Sbjct: 686 EDDVKLWEPGYRERYYEKKFGVKL-SEREFIDK-VTKSYMEGLCWVLEYYYQGVPAWDWF 743
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA D +D+ +I FE PFKPF QLLGVFP+AS LPE + LM D +SP
Sbjct: 744 YPYHYAPFAQDFRDVGSMDIKFETSIPFKPFAQLLGVFPAASRIHLPEPLQTLMIDEDSP 803
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRNS +++
Sbjct: 804 ILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDEKRRNSWGDNVM 863
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKE--RLNPELSDGMNGYISPCAGDPHPPVF 773
F+ +PL D C +L +V + ++ + S G+ G + P F
Sbjct: 864 FIANENPL------YDLFCDKLYGLRAKDVSKPIPIDTKASYGITGSVLPDPNCVPASTF 917
Query: 774 RSPVASMED 782
+P+ S+ +
Sbjct: 918 DTPIPSISE 926
>gi|194892948|ref|XP_001977773.1| GG18055 [Drosophila erecta]
gi|190649422|gb|EDV46700.1| GG18055 [Drosophila erecta]
Length = 1583
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/714 (35%), Positives = 375/714 (52%), Gaps = 147/714 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------SIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P++L ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEHQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAA--DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
FR++++A ++ A + R+E ER FDSN ITPGTEFM L L+
Sbjct: 102 FRSAREAEQLEAKAAQRGERREHER-------------FDSNCITPGTEFMVRLQEGLRA 148
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ +++ DP W++ VILS PGEGEHKIM Y+R + P +DPNTRHCLYGLDADL
Sbjct: 149 FLKTKISTDPLWQQCSVILSGQETPGEGEHKIMDYIRYMKAQPDFDPNTRHCLYGLDADL 208
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L THE+HF +LRE V +F
Sbjct: 209 IILGLCTHELHFVVLREEV-------------------------------KFGRNVKRTS 237
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPP-FEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
V + + LH+ LREYL+ EF N ++D+ ++DD++ M F VGNDF+PH+P +
Sbjct: 238 VEETRFFLLHLGLLREYLELEFDALNTAERKLDVSQLIDDWVLMGFMVGNDFIPHLPCMH 297
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I A+ LL Y + LGG + + K +LRR++ F+ A+ E +F++ H
Sbjct: 298 ISSNALPLLYRTYISIYPTLGGNINENGKLNLRRLQIFLSALAEVELELFKE-------H 350
Query: 416 AERIKREKAQARRGD-DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
A+ +K A+ D DV + + +
Sbjct: 351 ADDLKYMNAKTEAFDVDVAEITESQDI--------------------------------- 377
Query: 475 GTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
+ +GA I E+ +E +E+ + +A L L++
Sbjct: 378 --------------DSDLGALISESMKLYEDGSEEDWSDEEAVLMNELKN---------- 413
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
+K YY KFN + + + +++ Y L WV+ YYY GV SW W
Sbjct: 414 -----------YKRNYYRNKFNR---DPQSDLLEELGHHYVNALQWVLDYYYRGVQSWDW 459
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
+YP+HYAPF SDL++++Q I F++G PF PF QLL V P+AS LP Y LM P+S
Sbjct: 460 YYPFHYAPFISDLRNIEQVQIDFQMGTPFLPFQQLLAVLPTASCKLLPAAYHDLMVLPSS 519
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
P+++FYP +FE D+NGK++ W+ + +PFIDE RLL + E L+ E RN
Sbjct: 520 PLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEEQLSLAERERN 573
>gi|330916279|ref|XP_003297360.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
gi|311330012|gb|EFQ94550.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
Length = 1394
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 277/741 (37%), Positives = 398/741 (53%), Gaps = 84/741 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPGISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + A + D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHNDSDSVTARKSEDQMFISIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +A + E+ R++ REG ++P + + FDSN ITPGT FMA L+ L+Y+I
Sbjct: 102 FR-------TALDTEKAREKAIREGVEMPTE---EAFDSNCITPGTAFMAKLTQQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ ++V+LS VPGEGEHK+M Y+R + PGYDPN RHCLYGLDADLIM
Sbjct: 152 NKKVSEDIDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HFS+LRE V T G+Q + K+ E + +
Sbjct: 212 LGLLSHDPHFSLLREEV-TFGRQSQA-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR----AR 410
I EGA+ L+ VYK GY+ + ++ R+ + + E R F+ A
Sbjct: 303 HINEGALALMFNVYKTVLPKGKGYINEEGVINMERLATLLDELADIEYRHFESENSDAAW 362
Query: 411 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLA---SGPSPSPYQ-QSEC 466
+ + K ARRG V Q V + L GP P ++E
Sbjct: 363 FKGKSLGKEDVMKKTARRGTVVMTTQQQALFAQVKSWLNDYLGKKEQGPLDFPVSLRAED 422
Query: 467 VGRLDNGKGTSGRPHKVPRLSSG---ATIGAAIVEAENSFETDPQENKEEFKAKLKELLR 523
+ P K + G + A E + + ++ +E K + +++
Sbjct: 423 RKFVQELAEKLRLPWKTVQNDDGDRHIQVTAPPKLVEGDSDEEEEDTDDESKKAIARIVQ 482
Query: 524 DKSDAFNSD-NPEEDKVKLGEP------GWKERYYEEKFNAKTPEEREETRKDVVLRYTE 576
A D +PE+ + ++ + WK YY+ KF E E R + Y +
Sbjct: 483 KYEQAKVVDVSPEDAQSEMQKKYDEKFEAWKNDYYKSKFEWDRSNEEELRR--LTENYVQ 540
Query: 577 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA 636
GL WV++YYY GV SW W+Y YHY+P SD+K + +I+F+LG PFKPF QL+GV P
Sbjct: 541 GLQWVLYYYYRGVASWPWYYQYHYSPMISDVKRGLKADINFKLGQPFKPFQQLMGVLPDR 600
Query: 637 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
S +P+ Y LMT+ +SPI DFYP DF +DMNGK+ W+ + K+PFI E RLL +
Sbjct: 601 SKSIVPKAYWPLMTNEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIQEDRLLKAMATK 660
Query: 697 EHTLTEEEARRNSIMADMLFV 717
E LT +E RNS + F
Sbjct: 661 EQDLTPDEKARNSFGVSLKFT 681
>gi|326488040|dbj|BAJ89859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/272 (75%), Positives = 231/272 (84%)
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 577
LK LRDKSD FNS+NPEEDK+KLGEPGW+ERYYE+KF A+TPE+ EE R+DVVL+YTEG
Sbjct: 2 LKVALRDKSDLFNSENPEEDKIKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEG 61
Query: 578 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSAS 637
LCWVMHYYYEGVCSWQWFYPYHYAPFASDLK L Q NI+FELG PFKPF+QL+GVFP+AS
Sbjct: 62 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGQLNITFELGSPFKPFDQLMGVFPAAS 121
Query: 638 SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 697
SHALP YR+LMTDP+SPI DFYP DFEVDMNGKR+SWQGIAKLPFIDE RLL E+KK+E
Sbjct: 122 SHALPVQYRQLMTDPSSPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDEDRLLSEIKKVE 181
Query: 698 HTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGM 757
HTLT EEARRNS M +MLFV +HP+S IY+L L K+R E+KE+L+P S GM
Sbjct: 182 HTLTPEEARRNSTMYNMLFVNGAHPISPYIYSLSSKFGHLADKDRNEIKEQLDPSASGGM 241
Query: 758 NGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
NGYIS C GDP PPVFRSPV +EDIM NQV+
Sbjct: 242 NGYISLCGGDPSPPVFRSPVDGLEDIMDNQVI 273
>gi|341892378|gb|EGT48313.1| CBN-XRN-1 protein [Caenorhabditis brenneri]
Length = 1684
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 276/719 (38%), Positives = 380/719 (52%), Gaps = 71/719 (9%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW +E+YP + VI+ +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYPCLSE--------VINESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +E+F +F YI+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F +++ A + +L + E+ G +P + + FDSN ITPGT FM L L +I
Sbjct: 102 FMSARTA------QTQLDKAIEK-GEVIPTE---KRFDSNCITPGTYFMTRLHDQLDEWI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +D W+ K+ILS NVPGEGEHKIM Y+R +R YDPNTRHC+YGLDADLIM
Sbjct: 152 KKKSESDSHWQGRKIILSGHNVPGEGEHKIMDYIRTERAKSDYDPNTRHCMYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L + +HE HFS+LRE V N + + + ++ D V
Sbjct: 212 LGIVSHEPHFSLLREEV------------------TFNTRPRKNEQKNKKPKRTDSDV-- 251
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
K + LH+ LREYL +EF + PF D+E +VDD+I M VGNDFLPH+P++ I
Sbjct: 252 -KTFHLLHLSLLREYLAWEFADVKESLPFAYDMERVVDDWIMMGLLVGNDFLPHLPSIHI 310
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+ A+ LL + YKK L GY+ + +L R E F+ + + F + Q A
Sbjct: 311 HDDALPLLYSTYKKVLPTLDGYINESGYLNLARFEKFLAQLALNDKNSFMDKLEDEQFMA 370
Query: 417 ERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGT 476
KR ++ GD E + + LVP F+ S + E G D+ +
Sbjct: 371 S--KRLPRTSQPGDSSEEASGEEELVP---FNSSDIEDNDEDDEKGTDESDGNGDDDEAA 425
Query: 477 SGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKEL-LRDKSDAFNSDNPE 535
H+ G + G + + D +EEF +L L L DA ++N E
Sbjct: 426 FVSDHEEEDEVEGKSSGEELSPS----NLDALLLEEEFNDELATLALSGMDDADFANNVE 481
Query: 536 EDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
K + + K+ YY +K K + E + Y + W +HYYY G SW
Sbjct: 482 ACWTKTLDNQFKRHKKSYYADKLRYKNISKSE--LRAQAEGYVRAIQWNLHYYYHGCVSW 539
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM-TD 651
WFYP+HYAPF SD++ I FEL PF PF QLL V P AS+ LP ++LM +D
Sbjct: 540 SWFYPHHYAPFISDVQGFADMKIEFELSKPFHPFEQLLAVLPEASADCLPRPLQELMSSD 599
Query: 652 P-NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
P S I DFYP+ FE D+NGKR W+ + +PFI E RLL+ ++ LT EE RN+
Sbjct: 600 PAKSVIYDFYPSKFETDLNGKRNDWEAVVLIPFIAENRLLEAIESKRSRLTNEENMRNT 658
>gi|403163584|ref|XP_003323653.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164365|gb|EFP79234.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1452
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 279/761 (36%), Positives = 397/761 (52%), Gaps = 127/761 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGV F+RW++E+YP V+ ++EE +IP ++DNLYLDMNGIIH
Sbjct: 1 MGVSKFFRWMSERYPFVL-QLVEEN-------RIP-----------QFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP + A T ++++ +F Y++ LF + +P+K+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 HCSHPNEGSAHFRITEEDIYLAIFSYLEHLFALAKPQKVFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F+ +K E + L ++ R G KLP DS FDSN ITPGT FMA LS L+Y+I
Sbjct: 102 FKTAK-------ENQELIEKAIRRGEKLP---DSTGFDSNCITPGTPFMARLSEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ ++VI S +VPGEGEHKIM Y+RL + Y+PN RHC+YGLDADLIM
Sbjct: 152 NKKVSEDSAWQSVQVIFSGHDVPGEGEHKIMEYIRLSKAQEDYNPNIRHCVYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V K A + KG E
Sbjct: 212 LGLLSHDPHFCLLREEV--------------------------KFSAQKSSSKGLE---- 241
Query: 299 KKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + LHI +R+YLD+EF ++ + E DLE I+DDFI +C FVGNDFLPH+P L
Sbjct: 242 NQRFYLLHISLVRDYLDWEFASLRKVKD--LEYDLERIIDDFILLCIFVGNDFLPHLPNL 299
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
I EGA+ LL +YK+ GGYL + R++ + + YE F+
Sbjct: 300 HINEGALGLLFDIYKRVLPKAGGYLNEFGTLHTERLQLVLNELIVYERENFEHIC-ADSS 358
Query: 415 HAERIKREKAQARRGDDVEPL----AQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL 470
E + ++++ PL Q L + +F S L SPS Y+ + +
Sbjct: 359 WIESKRSSHGKSKKKATNNPLVLSETQRTLLSKIEQFVQSNLN---SPSKYEATLALPAC 415
Query: 471 DNGKGTSGRPHKVPR-LSSGATIGAAIVE-AEN-----SFETDPQENKEEFKA--KLKEL 521
K K R L++ + + E EN + DP ++ E A ++++
Sbjct: 416 YPAKD-----RKFLRDLAAELNLCISFDEFNENDEPLITLAFDPDQSPPEDSAINAVQDM 470
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET-RKDVVLRYTEGLC- 579
L D F P + + + E +++ AK PE E+ ++ ++ + L
Sbjct: 471 LED----FQLGQPAKPETNTAQSKVDEVFHKYTQAAKEPEWNEDDFDQEQEQKFQKALSE 526
Query: 580 WVMHYYYE--------------------------------GVCSWQWFYPYHYAPFASDL 607
W YY+E GV SW WFYPYHY+P SDL
Sbjct: 527 WKSQYYHEKMNLDFANPDQLHELTYAYTEGLQWVLHYYYDGVASWSWFYPYHYSPMISDL 586
Query: 608 KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 667
++ + SF LG PFKPF QL+GV P SS +P +R LM + SPI D YP FE D
Sbjct: 587 SNVAPYKFSFNLGKPFKPFEQLMGVLPELSSSHVPPAFRDLMVNSESPIIDLYPRQFETD 646
Query: 668 MNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+NGK++ W+ I K+PFID+ RLL +K EH L +EE RRN
Sbjct: 647 LNGKKHDWEAIVKIPFIDQDRLLKAMKAHEHKLLDEERRRN 687
>gi|171694057|ref|XP_001911953.1| hypothetical protein [Podospora anserina S mat+]
gi|170946977|emb|CAP73781.1| unnamed protein product [Podospora anserina S mat+]
Length = 1419
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 271/746 (36%), Positives = 400/746 (53%), Gaps = 102/746 (13%)
Query: 3 VPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPC 62
VP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH C
Sbjct: 1 VPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIHNC 41
Query: 63 FHPED---RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
H + + A + +++F +F+YI+ LF ++P+ L +MAIDGVAPRAKMNQQR+RRF
Sbjct: 42 THKDSDDVQQARISEEQMFIAIFNYIEHLFGKIKPKTLFFMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R + DA ER R + +EG++LP + FDSN ITPG + +L+Y+I+
Sbjct: 102 RTALDA-------ERARDKAIQEGKELPKEPP---FDSNCITPGMLLPPDVWFSLKYFIN 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+++ D W+ +++LS VPGEGEHKIM Y+R R P Y+PN RHCLYGLDADLIML
Sbjct: 152 KKVSEDKDWQGPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYNPNVRHCLYGLDADLIML 211
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L +H+ HF +LRE V Q G + K + K E + +
Sbjct: 212 GLLSHDPHFCLLREEV-------------QFGRV------KDQHKVKELEHQN------- 245
Query: 300 KPYQFLHIWTLREYLDYEF---RIPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ +H+ +REYL+ EF ++P P D+E ++DDFI M FFVGNDFLP++P
Sbjct: 246 --FYLMHLCIVREYLELEFQELKVPGAIPMPFDMEKVIDDFILMAFFVGNDFLPNLPRFH 303
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I EGA+ + +YK+ R GY+ + + +L+R+ ++ +G E R F+
Sbjct: 304 INEGALATMFKIYKEVLRKCDGYINENGRVNLKRLAILLEELGREEYRFFEH-------- 355
Query: 416 AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ-------SECVG 468
+ E A RG + L ++ + +R G + S + ++ +
Sbjct: 356 ----ENEDAGWLRGKKM--LEHDEAEIARARVKGKLIISSDQKTLWKTKIRKFLTNRNSQ 409
Query: 469 RLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SFETDPQENKEEFKAKLKE 520
LD G G + K V L+ A I A E ++ +F E++E+ +A+
Sbjct: 410 TLDLGTGLNAADRKFVQDLADAAHIEWATKEDDDGRRHLILTFPVRDDEDEEDEEAQSAS 469
Query: 521 L-LRDKSDAF--------NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 571
L + K D+ ++ + E K K WK+ YY++KF + E+ + +
Sbjct: 470 LRIVKKYDSAQVLDLTGADAQSAMEAKYKQKFQEWKDGYYKDKFPEWAEGKHEDELRKLA 529
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
Y +GL WV+ YYY G+ SW WFY YHY+P SD+ +++F LG PF+P QL+G
Sbjct: 530 ENYVQGLQWVLFYYYRGIASWPWFYRYHYSPLVSDVVKGLGADLNFTLGQPFRPNEQLMG 589
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P S +P Y LMTD +SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLLD
Sbjct: 590 VLPDRSKSIVPTVYWPLMTDKDSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLD 649
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFV 717
+ L++EE RN + F
Sbjct: 650 AMAPKNDLLSDEEKARNDFGVALKFT 675
>gi|308480687|ref|XP_003102550.1| CRE-XRN-1 protein [Caenorhabditis remanei]
gi|308261282|gb|EFP05235.1| CRE-XRN-1 protein [Caenorhabditis remanei]
Length = 1668
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 276/721 (38%), Positives = 386/721 (53%), Gaps = 78/721 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW +E+YP + VI+ +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYPCLSE--------VINESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +E+F +F YI+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEEEIFINIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F +++ A+S E+ G LP + + FDSN ITPGT FM L L +I
Sbjct: 102 FMSAR-TANSQMEKAIAN------GEILPTE---KRFDSNCITPGTYFMTRLHNKLDEWI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +D W+ K+ILS NVPGEGEHKIM ++R +R GYDPNTRHC+YGLDADLIM
Sbjct: 152 KKKSASDSHWQGRKIILSGHNVPGEGEHKIMDFIRTERAKSGYDPNTRHCMYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L + +HE HFS+LRE V N + + + ++ D V
Sbjct: 212 LGIVSHEPHFSLLREEV------------------TFNSRPRKNEQKNKKPKRTDSDV-- 251
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
K + LH+ LREYL +EF + PF D+E IVDD+I M VGNDFLPH+P++ I
Sbjct: 252 -KTFHLLHLSLLREYLAWEFADVKESLPFAYDMERIVDDWIMMGLLVGNDFLPHLPSIHI 310
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+ A+ LL + YKK L GY+ + +L R E F++ + + F + Q
Sbjct: 311 HDDALPLLYSTYKKVLPTLDGYINESGYLNLARFEKFLEQLSLNDKNSFMDKLEDEQ--- 367
Query: 417 ERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGT 476
++ +K + + D + + + LV F S + S +++E +NG
Sbjct: 368 -FMESKKLRPSQNDIFQEASVEEELVA---FESSDIESDAEDKDDEKNETD---ENGDDD 420
Query: 477 SG--RPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKEL-LRDKSDAFNSDN 533
+ H+ S G + +ENS D +EEF +L L L DA ++N
Sbjct: 421 AAFVSDHEEENESEDKLSGKEL-SSENS---DDVLLEEEFNDELATLALSGMDDADFANN 476
Query: 534 PEEDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
E K + + K+ YY K K + E + Y + W +HYYY G
Sbjct: 477 VEACWTKTLDNQFKRHKKSYYSNKLRYKNISKTE--LRAQAEGYVRAIQWNLHYYYHGCV 534
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM- 649
SW WFYP+HYAPF SD++ I FEL PF PF QLL V P AS+ LP+ ++LM
Sbjct: 535 SWSWFYPHHYAPFISDVRGFANMKIEFELSQPFHPFEQLLAVLPEASADCLPKPLQELMS 594
Query: 650 TDPN-SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+DP S I DFYP +FE D+NGKR W+ + +PFI+E RLL+ ++ + L+ EE RN
Sbjct: 595 SDPTKSMIHDFYPANFETDLNGKRNDWEAVVLIPFIEEKRLLEAIESKRNRLSREENMRN 654
Query: 709 S 709
+
Sbjct: 655 T 655
>gi|410730385|ref|XP_003671372.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
gi|401780190|emb|CCD26129.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
Length = 1548
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 275/781 (35%), Positives = 404/781 (51%), Gaps = 123/781 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF +F YID LF ++P+K+ YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFQTIKPKKVFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E L++ E G ++P + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAMDA------ENALQKALEN-GEEIP---KGEPFDSNSITPGTEFMAKLTKNLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++++I S PGEGEHKIM ++R R G+D NTRHC+YGLDADLI+
Sbjct: 152 HEKISNDAQWREVEIIFSGHEAPGEGEHKIMDFIRTLRAQKGFDHNTRHCIYGLDADLII 211
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L+TH HF++LR EVVF G+++ +AK +
Sbjct: 212 LGLSTHAPHFALLREEVVF--GRRN---------------PNQAK-------------TL 241
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + LH+ LREY++ EF+ FE D E ++DDF+ + F +GNDFLP++P L
Sbjct: 242 ENQNFYLLHLSLLREYMELEFKEIADEMQFEFDFERVLDDFVLVMFVIGNDFLPNLPDLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---ARLH 412
+ +GA +L+ +K+ GY+ + K +L R+ ++Q + +E F+K
Sbjct: 302 LNKGAFVVLLQTFKEALLHSDGYINEHGKINLERLRVWLQYLSQFELMNFEKNDIDVEWF 361
Query: 413 QRHAERI--KREKAQARRGDDVE-----------------------PLAQPDSLVPVSRF 447
+ E I + E+ +AR G + P+ PD +P
Sbjct: 362 NQQLENISLEGERKRARIGKKLLIKQQKKIVGMVKPWIIKEMSEKIPIGTPDEQIPT--- 418
Query: 448 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP 507
P V LD K + + S + ++ + ++
Sbjct: 419 -----------LPLTNENIVENLDFLKKFAFDLGLIVVHSKSKDTYSLRIDLDGFDASES 467
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNP-----EEDKVKLGEPGWKERYYEEKFNAKTPEE 562
+E + + L++ ++ A ++ E+D WK+ YY++K K +
Sbjct: 468 EEEHVKRLSSLRKTIKSYQQAVLVEDADELQREQDLYNTRFESWKKDYYKDKLGFKA--D 525
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGH 621
EE + Y EGL WV++YYY G SW W+Y YHYAP SDL K LDQ I F +
Sbjct: 526 IEENITKLTKNYVEGLQWVLYYYYRGCPSWGWYYRYHYAPRISDLEKGLDQV-IEFAKDN 584
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
PFKPF QL+ V P S + +P R LM DP SPI DFYPT+ ++D NGK W+ + L
Sbjct: 585 PFKPFEQLMSVLPERSKNLIPPVLRPLMYDPKSPILDFYPTEVKLDKNGKTADWEAVVLL 644
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF-------VLLSHPLSASIYTLD-EH 733
PF+DE RL+D +K L+ EE RNS + F ++ PLS L+ +H
Sbjct: 645 PFVDETRLIDAMKPYLSKLSPEEKARNSFGKPLTFTFNPQVDLVYKSPLSGLFSDLEHDH 704
Query: 734 C 734
C
Sbjct: 705 C 705
>gi|405120875|gb|AFR95645.1| exonuclease II Exo2 [Cryptococcus neoformans var. grubii H99]
Length = 1448
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 267/698 (38%), Positives = 362/698 (51%), Gaps = 91/698 (13%)
Query: 53 LDMNGIIHPCFHP---EDRPA-PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPR 108
LDMNGIIH C HP E+ P T +++ +F YID LF ++P+K+ +MAIDGVAPR
Sbjct: 23 LDMNGIIHNCSHPPSSENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPR 82
Query: 109 AKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 168
AKMNQQRSRRFRA KDA D R++ E+ G KLP D + FDSN ITPGT FMA
Sbjct: 83 AKMNQQRSRRFRAGKDARDQ-------REKAEKNGEKLP---DEKAFDSNAITPGTPFMA 132
Query: 169 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 228
LS L+YY+ R++ D W I+VILS +VPGEGEHKI ++RL + P Y+PNTRHC
Sbjct: 133 RLSQHLKYYVRKRISEDADWRNIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHC 192
Query: 229 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 288
LYGLDADLIML L +H+ HF +LRE V G+ R+ E
Sbjct: 193 LYGLDADLIMLGLLSHDPHFCLLREEV---------------------TFGRKSRQNTEL 231
Query: 289 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGND 346
+ LH+ +REYLD EF FE DLE I+DDFI M FVGND
Sbjct: 232 ANTN---------FFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGND 282
Query: 347 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
FLPH+P L I EGA+ + +YK + GY+ + SL R++ + + +E + F+
Sbjct: 283 FLPHLPDLHINEGALERIWGMYKDILPTIDGYINEHGTISLPRLQLLLDKLAEFEVKRFE 342
Query: 407 ----KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 462
+ H + ++G V Q L + F + P+P
Sbjct: 343 DDLLDQVHFSGNHTRDTMMIEKARKKGRKVITKYQQKVLNQLRSFIEKQQN---QPNPTH 399
Query: 463 QSECVGRLDNGKGT-----SGRPHKVPRLSSGATIGAAIV------------------EA 499
+ E + D + H G +++ E
Sbjct: 400 RLELINTQDKRDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGNEE 459
Query: 500 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED-------KVKLGEPGWKERYYE 552
+ +E+D E ++E K ++ + R+ S A D ED K+K K +YY
Sbjct: 460 DGDWESD--EMEDEGKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYH 517
Query: 553 EKF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
+K N P + + D+V Y EGL W+++YYY+GV SW WFY YHY+P +DLK +
Sbjct: 518 DKLEINYSDPAQMQ----DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGV 573
Query: 611 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 670
F+ G PF PF QL+GV P S +P YR LM + SPI DFYP +FE+DMNG
Sbjct: 574 SDMKFEFDYGKPFTPFQQLMGVLPVDSMDHVPLAYRDLMYEETSPIIDFYPRNFELDMNG 633
Query: 671 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
K+ W+ + K+PFID+ RLL + + LT EE RN
Sbjct: 634 KKQDWEAVVKIPFIDQNRLLKAMAARDIRLTPEERERN 671
>gi|195338777|ref|XP_002036000.1| GM16241 [Drosophila sechellia]
gi|194129880|gb|EDW51923.1| GM16241 [Drosophila sechellia]
Length = 464
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/482 (50%), Positives = 301/482 (62%), Gaps = 25/482 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAF+RWL+ KYP V+ + E + V D G I D + PNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDATLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP DE+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
RA+K+ + E R+R+E G KLPP K FDSN ITPGT FM LS L Y++
Sbjct: 121 RAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H RLNN+P W+ IKVILSDANVPGEGEHKIM Y+R QR P +DPNT+H L G DADLIM
Sbjct: 181 HDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +F+I+RE F P + C +C GH C G + K D +
Sbjct: 241 LGLATHEPNFTIIRE-EFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGA 299
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F+ + LREYL +PN PFE E +DD++FMCFFVGNDFLPH+P+LEIRE
Sbjct: 300 EVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 359
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
G ++ L+ +YKK G G S RV+ + +G+ ED+IF+ R R ++ R
Sbjct: 360 GTVDRLVELYKKCVYRQGLSHRLGRCKS-DRVQLIMTDLGNAEDQIFKSRQRREEQFKAR 418
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGS--RLASGPSP-SPYQQSECVGRL-DNGK 474
K K Q R D HGS + A G S P Q + VG + G+
Sbjct: 419 DKARKRQERNQD-----------------HGSLNQSAFGASAVGPNSQQKSVGNYKEEGR 461
Query: 475 GT 476
GT
Sbjct: 462 GT 463
>gi|366992011|ref|XP_003675771.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
gi|342301636|emb|CCC69407.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
Length = 1488
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 276/775 (35%), Positives = 407/775 (52%), Gaps = 95/775 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF +F YID LF+ ++P+K YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFLTIKPKKTFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E Q+ G ++P + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAMDA-------EHALQKAIDHGEEIP---KGEPFDSNSITPGTEFMAKLTKNLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W +I +I S VPGEGEHKIM ++R +D NTRHC+YGLDADLI+
Sbjct: 152 HDKISNDAKWREIDIIFSGHEVPGEGEHKIMDFIRRITAEKDFDENTRHCIYGLDADLII 211
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L+TH HF++LR EVVF +K +
Sbjct: 212 LGLSTHAPHFALLREEVVFGRRNSNKV------------------------------KTL 241
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + LH+ LREY++ EF F D E ++DDFI + F +GNDFLP++P L
Sbjct: 242 ENQNFYLLHLSLLREYMELEFSEIADEMQFPFDFERVLDDFILVMFVIGNDFLPNLPDLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---ARLH 412
+ +GA +++ +K+ L GY+ + K +L R+ + Q + +E F+K
Sbjct: 302 LNKGAFPVILQTFKEALLHLDGYINEHGKINLERLRVWFQYLSQFELLNFEKSDIDVEWF 361
Query: 413 QRHAERI--KREKAQARRGDDVEP--------LAQPDSLVPVSRFHGSRLASGPSPS-PY 461
+ E I + E+ +AR G + + +P + +S + L PS
Sbjct: 362 NQQLENISLEGERKRARMGKKLLIKQQKKIVGMVKPWIMKELSVKIPTDLPEDQVPSLTI 421
Query: 462 QQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKEL 521
+Q V LD K + S + V+ ++ ++ +E +++ A L+++
Sbjct: 422 KQENIVENLDFLKKFAFDLGLFVVHSKSKDTYSLRVDLDSINPSETEEERQKRVAGLRKI 481
Query: 522 LRDKSDAF---NSDNPEEDKVKLGE--PGWKERYYEEKFNAKTPEEREETRKDVVLRYTE 576
++ A ++D E++K E WK YY++K KT +EE+ + Y E
Sbjct: 482 IKSYQQAVLVEDADELEKEKGLYDERFENWKHDYYKDKLGFKT--NQEESVVSLTNNYVE 539
Query: 577 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPS 635
GL WV++YYY G SW W+Y YHYAP SDL K LDQ I F+ G PF PF QL+ V P
Sbjct: 540 GLQWVLYYYYRGCPSWGWYYHYHYAPRISDLEKGLDQI-IKFDKGRPFTPFEQLMAVLPE 598
Query: 636 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 695
S + +P R LM D SPI DFYP++ ++DMNGK W+ + L F+DE RL++ +K
Sbjct: 599 RSKNLIPPALRPLMYDEKSPIIDFYPSEVKLDMNGKTADWEAVVLLSFVDEKRLVEAMKP 658
Query: 696 IEHTLTEEEARRNSIMADMLFV-------LLSHPLSASIYTLD-EHCKQLKIKER 742
T EE RNS + F+ + PLS L+ +HC + + E+
Sbjct: 659 YLSKFTPEEKLRNSFGTSLKFIFNQQVDTIYKSPLSGIFSDLEHDHCVEREFVEK 713
>gi|410077707|ref|XP_003956435.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
gi|372463019|emb|CCF57300.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
Length = 1499
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 281/771 (36%), Positives = 404/771 (52%), Gaps = 100/771 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMISQ--------LIEGAQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF +F YID LF ++P+K+ YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E L++ E+ G ++P + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAMDA------EAALKKAIEK-GEEIP---KGEPFDSNAITPGTEFMAKLTKNLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++ VI S VPGEGEHKIM ++R R+ Y+ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSKWREVDVIFSGHEVPGEGEHKIMDFIRNIRSQKDYNNNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L+TH HF++LR EVVF G+ K + +
Sbjct: 212 LGLSTHAPHFALLREEVVF----------------------GRRSSKPAPLEHQN----- 244
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ LH+ LREY++ EF + F+ D E I+DDFI + F +GNDFLP++P L
Sbjct: 245 ----FYLLHLSLLREYMELEFNEIADDLKFDYDFERILDDFILVMFVIGNDFLPNLPDLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---ARLH 412
+ +GA +L+ +K+ L GY+ + + +L R+ ++ + +E F+K
Sbjct: 301 LNKGAFPVLLQTFKEALLHLDGYINENGQINLERLRVWLNYLSQFELMNFEKNDIDVEWF 360
Query: 413 QRHAERIKREKAQAR-RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC-VGRL 470
+ E I E + R R L Q +V + LA+ PS + L
Sbjct: 361 NQQLENISLEGERKRARSGKKLLLKQQKKIVGKVKPWIMHLANEKFPSDLPDDQIPTLLL 420
Query: 471 DNGKGTSGRPHKVPRLSSGA-TIGAAIVEAEN----SFETD-----PQENKEEFKAK--- 517
++ K + L A +G IV +++ S + D P E EE +
Sbjct: 421 NDDKSEFNVAENLAFLKEFAHDLGVFIVHSKSKDTYSLKLDIDGINPSETDEEHNERVGA 480
Query: 518 LKELLRDKSDAFNSDNPEE---DKVKLGEP--GWKERYYEEKFNAKTPEEREETRKDVVL 572
++ +++ A ++ EE ++ E WK+ YY++K + ET +
Sbjct: 481 IRRVIKRYQQAVLVEDAEELEREQTLYNEKFQNWKQEYYKDKLGF--AQNDSETVTTLAK 538
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLG 631
Y EGL WV++YYY G SW W+Y HYAP SDL K LDQ I F+ G PF PF QL+
Sbjct: 539 NYVEGLQWVLYYYYRGCPSWGWYYRDHYAPRISDLEKGLDQI-IKFDKGRPFTPFEQLMA 597
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P S + +P +R LM D NSPI DFYP+ ++D NGK W+ + L F+DE RL+D
Sbjct: 598 VLPERSKNLIPAAFRPLMYDTNSPILDFYPSQVKLDKNGKTADWEAVVLLTFVDENRLVD 657
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFV-------LLSHPLSASIYTL-DEHC 734
+K + L+ EE RN D+ F+ L PLS L + HC
Sbjct: 658 AMKPLLSKLSPEEKVRNQFGTDLKFIFSPQVDNLYKSPLSGIFSDLENNHC 708
>gi|357624452|gb|EHJ75231.1| putative 5-3 exoribonuclease 1 [Danaus plexippus]
Length = 730
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 267/713 (37%), Positives = 371/713 (52%), Gaps = 118/713 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+ +E+YP + ++ +IP ++DN+YLDMNGIIH
Sbjct: 1 MGVPKFFRYTSERYPCLNE--------LVKQYQIP-----------DFDNMYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D T +++F+ +F YI LF +++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 42 NCSHPDDSNPHFRITEEKIFKDIFHYISILFQIIKPKKLFFMAIDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR SA E E+L + + +G LP + + FDSN ITPGT FMA L L+Y+I
Sbjct: 102 FR-------SAREAEKLEETAKEKGEALPTE---KRFDSNCITPGTVFMARLHEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ DP W K+KVILS PGEGEHKIM Y+R R+ P YDP+TRHCLYGLDADLIM
Sbjct: 152 KEKISTDPLWSKVKVILSGHETPGEGEHKIMDYIRWARSQPDYDPSTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L + THE HF++LRE V GK ++A +E
Sbjct: 212 LGVCTHEPHFALLREEVKF---------------------GKTTQRATSPEETN------ 244
Query: 299 KKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ LH+ LREYL+ EF N PF D+E I+DD++ M F VGNDF+P++P + I
Sbjct: 245 ---FYLLHLSLLREYLEQEFISIKDNLPFPYDIENIIDDWVLMGFLVGNDFIPNLPNMHI 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
A+ LL Y L GY+ + +L R E F+Q +
Sbjct: 302 SNDALPLLYKTYMTVLPTLDGYINESGDLNLGRFEVFMQELA------------------ 343
Query: 417 ERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGT 476
+I +EK Q D+ + F +G P+ ++ + D+
Sbjct: 344 -KIDKEKFQ-------------DTYADLKYFEAK---TGRRPNANERRDYKPNNDDTFNV 386
Query: 477 SGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
+ K + A+++A D ++ E+++ + SD EE
Sbjct: 387 NLDDIKANKPDDEL---QALIDATQEMFMDDMKSDEDYE--------ETSD-------EE 428
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
+++ K+ YY K + + +E D Y + W + YYY G SW W+Y
Sbjct: 429 ANMEMEFILHKKDYYMNKLDYS--KVTDEVLSDQAECYVRAIQWNLWYYYRGCPSWCWYY 486
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
P+HYAP+ SD+KD N+ FELG PFKPF QLL V P AS H LP + LMTD +SPI
Sbjct: 487 PHHYAPYISDIKDFGNMNMEFELGEPFKPFEQLLAVLPGASKHLLPTPFHDLMTDEDSPI 546
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
+YP FE D+NGK+ W+ + LPFIDE LL + LTEEE +RNS
Sbjct: 547 VHYYPVSFETDLNGKKNDWEAVVLLPFIDETNLLSAMSPCYQRLTEEELKRNS 599
>gi|395330505|gb|EJF62888.1| 5'-3' exoribonuclease 2 [Dichomitus squalens LYAD-421 SS1]
Length = 1182
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 305/443 (68%), Gaps = 25/443 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-----DGVKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP ++ VIE E I + V +PV+ + PNPNG+E+D+LYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIILPVIEAEQATIPDTEGNEVAVPVNIADPNPNGVEFDSLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE +PAP T +E+ +F Y +R+ MVRPRKLL+MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMIEIFSYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQE----FEREGRKLPPK-SDSQVFDSNVITPGTEFMAVL 170
SRRFR++++A E+E R+E +E G+ L + + + +DSN ITPGT FM +L
Sbjct: 121 SRRFRSAQEAK----EKEEARKESIAMWEAMGKTLSEEEKNKKAWDSNAITPGTPFMDLL 176
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
+ +L+Y++ ++N DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR+ PG+DPNT H +Y
Sbjct: 177 ASSLRYWVVYKMNTDPGWKDVQVIISDASVPGEGEHKIMDFIRRQRSNPGHDPNTHHVIY 236
Query: 231 GLDADLIMLALATHEVHFSILREVVF-TPGQQDKCFLCGQPGHLAANCEG-KAKRKAGEF 288
GLDADLIML+LATHE HF +LRE VF G + C +CGQ GH AA C G KA+ K
Sbjct: 237 GLDADLIMLSLATHEPHFRVLREDVFHQEGSRTACRICGQEGHYAAQCTGTKAEIK---- 292
Query: 289 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 348
+ KKP+ FL + LREYL+ E +PN PF + E +DD++ + FFVGNDFL
Sbjct: 293 -----KTPPEKKPFIFLDVAILREYLEAELNVPNVPFPFNFEQAIDDWVLLIFFVGNDFL 347
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
PH+P+LEIREGAI+ L+ +++ E +GGY+T+ + L R + ++ + ED IF++R
Sbjct: 348 PHLPSLEIREGAIDTLLKIWRTELPRMGGYITNHGQLELSRAQIILEGLARREDEIFRRR 407
Query: 409 ARLHQRHAERIKREKAQARRGDD 431
+R + KR K + G +
Sbjct: 408 REAEERQDQNAKRRKIEKETGSN 430
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 154/229 (67%), Gaps = 9/229 (3%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
+ED+VKL EPG++ERYY +KF A+ ++ E RK V Y EG+ WV+ YYY+G SW W
Sbjct: 677 QEDQVKLWEPGYRERYYSQKFGAEYSDK--EFRKQVTKSYIEGMAWVLQYYYQGTPSWHW 734
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
+YP+H+APFA+D +DLD+ +I F LG PFKPF QL+GVFP++S +P + LMT+ S
Sbjct: 735 YYPFHFAPFAADFEDLDKMDIDFTLGQPFKPFEQLMGVFPASSRSHIPATFHDLMTEDTS 794
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYP+ F++DMNGKR +WQG+A LPFIDE RLLD + L+++E RRN +
Sbjct: 795 PIIDFYPSTFQIDMNGKRMAWQGVALLPFIDEKRLLDAMGPRYPNLSDDEKRRNQWGNNF 854
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 763
LFV +H L ++ + L K + + +NP+LS G+NG + P
Sbjct: 855 LFVYEAHALYPTL-------EALYGKRKKDEPLPINPKLSKGINGSLLP 896
>gi|367015260|ref|XP_003682129.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
gi|359749791|emb|CCE92918.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
Length = 1471
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 280/777 (36%), Positives = 406/777 (52%), Gaps = 116/777 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPLILQ--------LIEGSQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF ++ YID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRMTEEEVFAKIYAYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ ++ G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA-------EKAFEKAVANGEEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H ++ ND W I VI S VPGEGEHKIM ++R R +D NTRHC+YGLDADLIM
Sbjct: 152 HDKITNDSKWRDIDVIFSGHEVPGEGEHKIMDFIRNLRAQKDFDSNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L+ H+ HF++LR EVVF G+ A + E +
Sbjct: 212 LGLSVHDPHFALLREEVVF-----------GRRSSTAKSLENQN---------------- 244
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ LHI LREY+ EF+ F+ D E I+DDFI + F +GNDFLP++P L
Sbjct: 245 ----FYLLHISILREYMQLEFQEIADELQFDYDFERILDDFILVMFVIGNDFLPNLPDLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---ARLH 412
+ +GA +L+ +K+ + GY+ + + +L R+ +++ + +E F++
Sbjct: 301 LNKGAFPVLLQTFKEALLHVDGYINEHGQINLERLGVWLEYLSKFEQMNFERSDVDVDWF 360
Query: 413 QRHAERI--KREKAQARRG--------DDVEPLAQPDSL-VPVSRFHGSRLASGPSPSPY 461
+ E I + EK +AR G + L +P + V RFH P+
Sbjct: 361 NQQLENISLEGEKERARTGKKLLLKQQKKIVGLVKPWVIDVMSQRFH---------PNLA 411
Query: 462 QQSECVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETD-----PQENKEEFK 515
++ LD+ + T K G + + + S + D P+E EEF+
Sbjct: 412 EEDVPTLSLDDDRITENLEFLKEFAFQLGLFVTHSRSKDTYSLKVDVDAINPEETDEEFE 471
Query: 516 AKLKELLRDKSDAFNSDNPEEDKVKLGE---------PGWKERYYEEKFNAKTPEEREET 566
+ K +R + ED+ +L WK++YY++K E + T
Sbjct: 472 QRQKS-IRKTLKRYQQAILVEDQEELDNEREVYDERFAQWKDKYYKDKLGFSFNETEKLT 530
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK-DLDQFNISFELGHPFKP 625
+ + Y EGL WV++YYY G SW W+Y +HY+P SDLK LDQ ISFE GHPF P
Sbjct: 531 K--LCQNYVEGLQWVLYYYYRGCQSWGWYYRHHYSPRISDLKLGLDQV-ISFEKGHPFTP 587
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
F QL+ V P S + +P R LM + NSPI DFYP + ++D NGK W+ + L F+D
Sbjct: 588 FQQLMAVLPERSKNLIPTALRPLMFNENSPIRDFYPKEVDLDKNGKTADWEAVVLLSFVD 647
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLF-------VLLSHPLSASIYTLD-EHC 734
E RL+D + L+ EE RN + D+++ VL PLS ++ +HC
Sbjct: 648 EHRLIDAMAPYLPRLSPEEKVRNGVGKDLIYYFNPQVDVLYKSPLSGIFSDIEHDHC 704
>gi|212645611|ref|NP_496945.3| Protein XRN-1 [Caenorhabditis elegans]
gi|194680614|emb|CAC35856.3| Protein XRN-1 [Caenorhabditis elegans]
Length = 1591
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 277/727 (38%), Positives = 383/727 (52%), Gaps = 87/727 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW +E+YP + VI+ +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYPCLSE--------VINESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T DE+F +F YI+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEDEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F +++ A +L + E G +P ++ FDSN ITPGT FM L L +I
Sbjct: 102 FMSARTA------HTQLAKALEN-GEIMPSEAR---FDSNCITPGTYFMTRLHQKLDDWI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ D W+ K+ILS NVPGEGEHKIM ++R +R YDPNTRHC+YGLDADLIM
Sbjct: 152 KTKSATDSRWQGRKIILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIM 211
Query: 239 LALATHEVHFSILR-EVVFT--PGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
L + +HE HFS+LR EV F P + D KA +K D
Sbjct: 212 LGIVSHEPHFSLLREEVTFNTRPRKND----------------NKATKKPKRTDSD---- 251
Query: 296 VVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
K + LH+ LREYL +EF + PFE ++E IVDD+I + VGNDFLPH+P
Sbjct: 252 ---VKKFHLLHLSLLREYLAWEFADVKDSLPFEYEMERIVDDWILLGLLVGNDFLPHLPN 308
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
+ I + A+ LL + YKK L GY+ + +L R E F+ + + F
Sbjct: 309 IHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLAELALNDKTSFM------- 361
Query: 414 RHAERIKREK-AQARRGDDVEP----LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 468
ER++ E+ +++R V+P LA+P+ + S + S +
Sbjct: 362 ---ERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVEDEAGAEESKDEAGGAGAED 418
Query: 469 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKEL-LRDKSD 527
D+ S L G+ ++ D Q ++EF +L L L +D
Sbjct: 419 DEDDAAFVSDHEEDGDDLEPGSGSDELLLS-----NLDAQLLEDEFNDELATLALSGMND 473
Query: 528 AFNSDNPEEDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
A +++ E K + K+ YY +K K +++ ++ Y + W +HY
Sbjct: 474 ADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQ--LREQAEGYVRAIQWNLHY 531
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY G SW WFYP+HYAPF SD++ + FEL PF PF QLL V P AS+ LP
Sbjct: 532 YYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRP 591
Query: 645 YRKLM-TDP-NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 702
R+LM +DP SPI DFYP +FE D+NGKR W+ + +PFI+E RLL+ ++ LT
Sbjct: 592 LRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTS 651
Query: 703 EEARRNS 709
EE RNS
Sbjct: 652 EENARNS 658
>gi|6321265|ref|NP_011342.1| Xrn1p [Saccharomyces cerevisiae S288c]
gi|125342|sp|P22147.1|XRN1_YEAST RecName: Full=5'-3' exoribonuclease 1; AltName: Full=DNA strand
transfer protein beta; Short=STP-beta; AltName:
Full=KAR(-)-enhancing mutation protein; AltName:
Full=Strand exchange protein 1; AltName: Full=p175
gi|3847|emb|CAA38520.1| KEM1 protein [Saccharomyces cerevisiae]
gi|4413|emb|CAA43487.1| RAR5 [Saccharomyces cerevisiae]
gi|172580|gb|AAA35036.1| strand exchange protein 1 [Saccharomyces cerevisiae]
gi|172775|gb|AAA35125.1| DNA strand transferase beta [Saccharomyces cerevisiae]
gi|173192|gb|AAA35219.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae]
gi|695728|emb|CAA59180.1| DNA strand transferase, exoribonuclease [Saccharomyces cerevisiae]
gi|1322778|emb|CAA96885.1| KEM1 [Saccharomyces cerevisiae]
gi|285812040|tpg|DAA07940.1| TPA: Xrn1p [Saccharomyces cerevisiae S288c]
gi|392299577|gb|EIW10671.1| Kem1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1528
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 268/743 (36%), Positives = 405/743 (54%), Gaps = 91/743 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF + YID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+TH HF++LRE V T G++ N E K+ +
Sbjct: 212 LGLSTHGPHFALLREEV-TFGRR--------------NSEKKS---------------LE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQ 413
+GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKDDIDVEWFN 361
Query: 414 RHAERI--KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ E I + E+ + R G + Q + + + +L SP E + L+
Sbjct: 362 KQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LPDEEIPTLE 419
Query: 472 NGKGTSGRPH----KVPRLSSGATIGAAIVEAENSFETD-----PQENKEEFKAK---LK 519
K + H K G I + + S + D P E +EEF+ + ++
Sbjct: 420 LPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEFQNRVNSIR 479
Query: 520 ELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ ++ +A ++ EE +K E WK YY +K T + EE +D+ Y
Sbjct: 480 KTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEKVRDLAKDY 537
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVF 633
EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF PF QL+ V
Sbjct: 538 VEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLAKGLDQ-DIEFDLSKPFTPFQQLMAVL 596
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+DE RL++ +
Sbjct: 597 PERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAM 656
Query: 694 KKIEHTLTEEEARRNSIMADMLF 716
+ L+ EE RN D+++
Sbjct: 657 QPYLRKLSPEEKTRNQFGKDLIY 679
>gi|195479788|ref|XP_002101029.1| GE17387 [Drosophila yakuba]
gi|194188553|gb|EDX02137.1| GE17387 [Drosophila yakuba]
Length = 1581
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/715 (35%), Positives = 374/715 (52%), Gaps = 149/715 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------SIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P++L ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEHQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAA--DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
FR++++A ++ A + R+E ER FDSN ITPGTEFM L L+
Sbjct: 102 FRSAREAEQLEAKAAQRGERREHER-------------FDSNCITPGTEFMVRLQEGLRA 148
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ +++ DP W++ VILS PGEGEHKIM Y+R + P +DPNTRHCLYGLDADL
Sbjct: 149 FLKTKISTDPLWQRCSVILSGQETPGEGEHKIMDYIRYMKAQPDFDPNTRHCLYGLDADL 208
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L THE+HF +LRE V +F
Sbjct: 209 IILGLCTHELHFVVLREEV-------------------------------KFGRNVKRTS 237
Query: 297 VPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+PH+P L
Sbjct: 238 VEETRFFLLHLGLLREYLELEFDALSTAERKLDVAQLIDDWVLMGFMVGNDFIPHLPCLH 297
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I A+ LL Y + + LGG + + K +L R++ F+ A+ E F++ H
Sbjct: 298 ISSNALPLLYRTYIRIYPTLGGNINENGKLNLHRLQIFMSALTEVELEQFKE-------H 350
Query: 416 AERIKREKAQARRGD-DVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
A+ +K A+ D DV + + ++
Sbjct: 351 ADDLKYMNAKTEAFDIDVAEITESQNI--------------------------------- 377
Query: 475 GTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
+ +GA I E+ +E D +E D
Sbjct: 378 --------------DSDLGALINESMKLYEDDSEE----------------------DWS 401
Query: 535 EEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
+E+ V + E +K +Y KF + + E +++ Y L WV+ YYY GV SW
Sbjct: 402 DEEAVLMNEFKNYKRNFYRNKFKR---DPQGELIEELGHHYVNALQWVLDYYYRGVQSWD 458
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
W+YP+HYAPF SDL++++Q I F++G PF PF QLL V P+ASS LP Y LM +
Sbjct: 459 WYYPFHYAPFISDLRNIEQVQIDFQMGTPFLPFQQLLAVLPAASSKLLPVAYHDLMLLAS 518
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
SP+++FYP +FE D+NGK++ W+ + +PFIDE RLL + E L+ E RN
Sbjct: 519 SPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDERRLLAAMLPCEAQLSLAERERN 573
>gi|349578059|dbj|GAA23225.1| K7_Kem1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1528
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 271/755 (35%), Positives = 410/755 (54%), Gaps = 93/755 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF + YID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+TH HF++LRE V T G++ N E K+ +
Sbjct: 212 LGLSTHGPHFALLREEV-TFGRR--------------NSEKKS---------------LE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQ 413
+GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKDDIDVEWFN 361
Query: 414 RHAERI--KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ E I + E+ + R G + Q + + + +L SP E + L+
Sbjct: 362 KQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LPDEEIPTLE 419
Query: 472 NGKGTSGRPH----KVPRLSSGATIGAAIVEAENSFETD-----PQENKEEFKAK---LK 519
K + H K G I + + S + D P E +EEF+ + ++
Sbjct: 420 LPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEFQNRVNSIR 479
Query: 520 ELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ ++ +A ++ EE +K E WK YY +K T + EE +D+ Y
Sbjct: 480 KTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEKVRDLAKDY 537
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVF 633
EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF PF QL+ V
Sbjct: 538 VEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLAKGLDQ-DIEFDLSKPFTPFQQLMAVL 596
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+DE RL++ +
Sbjct: 597 PERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAM 656
Query: 694 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY 728
+ L+ EE RN D+++ +P +IY
Sbjct: 657 QPYLCKLSPEEKTRNQFGKDLIYSF--NPQVDNIY 689
>gi|365765775|gb|EHN07281.1| Kem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1528
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 271/755 (35%), Positives = 410/755 (54%), Gaps = 93/755 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF + YID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+TH HF++LRE V T G++ N E K+ +
Sbjct: 212 LGLSTHGPHFALLREEV-TFGRR--------------NSEKKS---------------LE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQ 413
+GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKDDIDVEWFN 361
Query: 414 RHAERI--KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ E I + E+ + R G + Q + + + +L SP E + L+
Sbjct: 362 KQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LPDEEIPTLE 419
Query: 472 NGKGTSGRPH----KVPRLSSGATIGAAIVEAENSFETD-----PQENKEEFKAK---LK 519
K + H K G I + + S + D P E +EEF+ + ++
Sbjct: 420 LPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEFQNRVNSIR 479
Query: 520 ELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ ++ +A ++ EE +K E WK YY +K T + EE +D+ Y
Sbjct: 480 KTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEKVRDLAKDY 537
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVF 633
EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF PF QL+ V
Sbjct: 538 VEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTPFQQLMAVL 596
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+DE RL++ +
Sbjct: 597 PERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAM 656
Query: 694 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY 728
+ L+ EE RN D+++ +P +IY
Sbjct: 657 QPYLCKLSPEEKTRNQFGKDLIYSF--NPQVDNIY 689
>gi|393910764|gb|EJD76029.1| CBR-XRN-2 protein [Loa loa]
Length = 764
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/598 (42%), Positives = 340/598 (56%), Gaps = 50/598 (8%)
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
MA L++AL+YY+H RLN+DPGWEK+ VILSDANVPGEGEHKIM ++R QR P +DPNT
Sbjct: 1 MARLAVALRYYVHQRLNSDPGWEKVAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTV 60
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
HCL G DADLIML LATHE +F+I+RE F P QQ C LCGQ GH +C+G A
Sbjct: 61 HCLCGADADLIMLGLATHEPNFNIIRE-EFMPNQQRPCDLCGQYGHDLNDCKGLALDDDS 119
Query: 287 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 346
E + + + F+ + LREYL+ E IPN DLE +DD++FMCFFVGND
Sbjct: 120 ECQSSP---LQKETNFIFVRLPVLREYLERELHIPNSSIPFDLERAIDDWVFMCFFVGND 176
Query: 347 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
FLPH+P+LEIRE AI+ L+ +YK + G+LTD + R + + +G ED IF+
Sbjct: 177 FLPHLPSLEIRENAIDRLVKLYKDMVYEMKGHLTDSGVVHIERAQIILNKLGEVEDEIFK 236
Query: 407 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 466
R Q+ + K +K + + L P + F + +GP C
Sbjct: 237 SRQEREQQFKRKNKEKKRRE------KALMTPSYISSRGSFLAPQ-TNGPI--------C 281
Query: 467 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFET--DPQENKEEFKAKLKELLRD 524
+ G++ R A + +EA + ET P + E EL D
Sbjct: 282 LS------GSNTR----------AMARTSRLEALDFIETLHVPGISVSENSCHRHELKDD 325
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
S S++ D+V+L E GWK+RYY+ KF + R+ V L Y EGLCWV+HY
Sbjct: 326 SS----SEDEVFDEVRLWEDGWKDRYYKSKFQVDGKD--IVFRRKVALAYVEGLCWVLHY 379
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE-LGHPFKPFNQLLGVFPSASSHALPE 643
YY+G SW W+YP+HYAPFASD + QF F PFKP QL+ VFP+AS LPE
Sbjct: 380 YYQGCASWDWYYPFHYAPFASDFDAVSQFKPDFSACTEPFKPLQQLMSVFPAASRVHLPE 439
Query: 644 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 703
+++LM P SPI DFYP +F +D+NGK+ +WQG+A LPF+DE RLL+ +K +E L
Sbjct: 440 AWQELMISPTSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAF 499
Query: 704 EARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
E RNS D LFV SHP L E+ K+ I ++ L+ GM G +
Sbjct: 500 EKERNSRGPDRLFVGPSHPFYKFAEELYENSKEDSIALSIDTS------LTFGMAGTV 551
>gi|151943641|gb|EDN61951.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
Length = 1528
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 271/755 (35%), Positives = 410/755 (54%), Gaps = 93/755 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF + YID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+TH HF++LRE V T G++ N E K+ +
Sbjct: 212 LGLSTHGPHFALLREEV-TFGRR--------------NSEKKS---------------LE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQ 413
+GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKDDIDVEWFN 361
Query: 414 RHAERI--KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ E I + E+ + R G + Q + + + +L SP E + L+
Sbjct: 362 KQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LPDEEIPTLE 419
Query: 472 NGKGTSGRPH----KVPRLSSGATIGAAIVEAENSFETD-----PQENKEEFKAK---LK 519
K + H K G I + + S + D P E +EEF+ + ++
Sbjct: 420 LPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEFQNRVNSIR 479
Query: 520 ELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ ++ +A ++ EE +K E WK YY +K T + EE +D+ Y
Sbjct: 480 KTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEKVRDLAKDY 537
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVF 633
EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF PF QL+ V
Sbjct: 538 VEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTPFQQLMAVL 596
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+DE RL++ +
Sbjct: 597 PERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAM 656
Query: 694 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY 728
+ L+ EE RN D+++ +P +IY
Sbjct: 657 QPYLCKLSPEEKTRNQFGKDLIYSF--NPQVDNIY 689
>gi|190407116|gb|EDV10383.1| 5'-3' exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259146337|emb|CAY79594.1| Kem1p [Saccharomyces cerevisiae EC1118]
Length = 1528
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 271/755 (35%), Positives = 410/755 (54%), Gaps = 93/755 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF + YID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+TH HF++LRE V T G++ N E K+ +
Sbjct: 212 LGLSTHGPHFALLREEV-TFGRR--------------NSEKKS---------------LE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQ 413
+GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKDDIDVEWFN 361
Query: 414 RHAERI--KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ E I + E+ + R G + Q + + + +L SP E + L+
Sbjct: 362 KQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LPDEEIPTLE 419
Query: 472 NGKGTSGRPH----KVPRLSSGATIGAAIVEAENSFETD-----PQENKEEFKAK---LK 519
K + H K G I + + S + D P E +EEF+ + ++
Sbjct: 420 LPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEFQNRVNSIR 479
Query: 520 ELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ ++ +A ++ EE +K E WK YY +K T + EE +D+ Y
Sbjct: 480 KTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEKVRDLAKDY 537
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVF 633
EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF PF QL+ V
Sbjct: 538 VEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTPFQQLMAVL 596
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+DE RL++ +
Sbjct: 597 PERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAM 656
Query: 694 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY 728
+ L+ EE RN D+++ +P +IY
Sbjct: 657 QPYLCKLSPEEKTRNQFGKDLIYSF--NPQVDNIY 689
>gi|256272237|gb|EEU07228.1| Kem1p [Saccharomyces cerevisiae JAY291]
Length = 1528
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 271/755 (35%), Positives = 410/755 (54%), Gaps = 93/755 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF + YID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA------EKALKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+TH HF++LRE V T G++ N E K+ +
Sbjct: 212 LGLSTHGPHFALLREEV-TFGRR--------------NSEKKS---------------LE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQ 413
+GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLNYLSQFELLNFEKDDIDVEWFN 361
Query: 414 RHAERI--KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ E I + E+ + R G + Q + + + +L SP E + L+
Sbjct: 362 KQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQEKLSPD--LPDEEIPTLE 419
Query: 472 NGKGTSGRPH----KVPRLSSGATIGAAIVEAENSFETD-----PQENKEEFKAK---LK 519
K + H K G I + + S + D P E +EEF+ + ++
Sbjct: 420 LPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSLKMDLDSINPDETEEEFQNRVNSIR 479
Query: 520 ELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ ++ +A ++ EE +K E WK YY +K T + EE +D+ Y
Sbjct: 480 KTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEYYHDKLKFTT--DSEEKVRDLAKDY 537
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVF 633
EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF PF QL+ V
Sbjct: 538 VEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTPFQQLMAVL 596
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+DE RL++ +
Sbjct: 597 PERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAM 656
Query: 694 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY 728
+ L+ EE RN D+++ +P +IY
Sbjct: 657 QPYLCKLSPEEKTRNQFGKDLIYSF--NPQVDNIY 689
>gi|383853936|ref|XP_003702478.1| PREDICTED: 5'-3' exoribonuclease 1-like [Megachile rotundata]
Length = 1665
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/713 (35%), Positives = 356/713 (49%), Gaps = 127/713 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P FYR+++E+YP + + E + +P E+DNLYLD+NGIIH
Sbjct: 1 MGIPKFYRYISERYPCLNETLKEHQ--------MP-----------EFDNLYLDVNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +++F+ +F YI+ LF M++P+KL ++AIDGVAPRAK+NQQR RR
Sbjct: 42 GCSHPNDAEVSFRITEEDIFKNIFRYIELLFRMIQPQKLFFIAIDGVAPRAKINQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+KDA A+ E +E R FDSN ITPGT FM ++ L+Y++
Sbjct: 102 FRAAKDAEIQEAKARAEGIEIPKEKR----------FDSNAITPGTAFMYKVNEHLRYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++++D W+K KVI S + VPGEGEHKIM Y+R + P YD +T+HCLYGLDADLIM
Sbjct: 152 TYKISSDKLWQKCKVIFSGSEVPGEGEHKIMDYIRYMKAQPDYDIHTKHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE+HF++LRE V +D+K +++ P
Sbjct: 212 LGLCTHELHFTLLREEV-------------------------------TYDKKQTKILTP 240
Query: 299 KKP-YQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+K + HI LREY+++EF F DLE I+DD+I M F VGNDF+PH+P L
Sbjct: 241 EKTKFCLFHISLLREYINHEFSQLREKLSFSYDLEKIIDDWILMGFLVGNDFIPHLPNLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I GA+++L VY L GY+ + L R E F
Sbjct: 301 ITHGALSILYEVYIDVLPTLEGYINEAGTLKLDRFEKF---------------------- 338
Query: 416 AERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKG 475
+E L+ D L + + G P ++E ++++ K
Sbjct: 339 ----------------MERLSSFDILKFSEHYADLKYLEGKMGRPLTETE---KVNHRKS 379
Query: 476 TSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE 535
S + P+ + A F + E+ D D +
Sbjct: 380 ESSEQNSSPKKAQDKRFNA-------------------FIKAVDEMSIGTEDELRDDESD 420
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+ + K YY K K E E+ + Y L W +HYYY G CSW W+
Sbjct: 421 SETYTMEFVQHKRDYYINKL--KYEEIDEDFLRSQAEGYVTALQWNLHYYYNGCCSWTWY 478
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YP+HYAP+ SD+KD + FELG PF PF QLL V P S LP ++ L+T+ SP
Sbjct: 479 YPHHYAPYISDIKDFKNLKLEFELGEPFLPFEQLLAVLPPYSKELLPSAFQPLLTEEQSP 538
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
I D+YP DFE D+NGK W+ + +PFID RL+D + LT EE RN
Sbjct: 539 IIDYYPMDFETDLNGKTLEWEAVILIPFIDATRLVDAMAPHYDKLTPEEKARN 591
>gi|388851631|emb|CCF54627.1| probable KEM1-multifunctional nuclease [Ustilago hordei]
Length = 1481
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 284/779 (36%), Positives = 398/779 (51%), Gaps = 127/779 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E+YPL+ + +IEE KIP E+DNLYLDMNGIIH
Sbjct: 1 MGIPKFFRFMSERYPLI-SQLIEEN-------KIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D A T ++F +F YI+ LF ++P+K+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPNDSDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +K+A + ++++ ER G LP + + FDSN ITPGT FMA LS L+Y+I
Sbjct: 102 FRTAKEA-------KEIKEKAERRGEVLP---EEEAFDSNCITPGTPFMAKLSQQLEYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++ D W ++VILS +VPGEGEHKIM Y+RL + P Y+PN RHCLYGLDADLIM
Sbjct: 152 AKKITEDADWRNVQVILSAHDVPGEGEHKIMEYIRLCKAQPDYNPNVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L +H+ HF +LRE V F P ++ K L Q
Sbjct: 212 LGLLSHDPHFCLLREEVQFGPRRKSKGSLESQN--------------------------- 244
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ LH+ REYLD EF+ + PF D E I+DDFI + FVGNDFLPH+P L
Sbjct: 245 ----FFLLHLSLFREYLDLEFQDLRSSLPFTYDFERIIDDFILLDIFVGNDFLPHLPGLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I EGAI+LL ++YK+ GGYL + R+E + + +E F++ H
Sbjct: 301 INEGAIDLLFSIYKQILPVAGGYLNESGNLRTDRLELVLAELCKFEMEQFERDYGDTATH 360
Query: 416 AERIKREK---AQAR-RGDDVEPLAQPDSLVPVSRFHGSRL--ASG-------PSPSPYQ 462
+I + K QA+ +G V +Q D V F +R +G P+ P +
Sbjct: 361 KAKISKNKKAITQAKAKGGLVLTKSQRDLFNKVHAFVMARRHDPAGAPEELLVPADLPNK 420
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLS-------SGATIGAAIVEAENSFETDPQENKEEFK 515
+ L + +K+ +S S I A ++++ + ++ EE
Sbjct: 421 DKRFLEDLASSLKLRASFNKIDPISQQPAITLSFPAIAAEDDDSDDGPSDEDGDDSEEDS 480
Query: 516 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT-----PEEREETRKDV 570
A N P + + + RY + K + + PEE + R DV
Sbjct: 481 DDESPSPSADEGARNKSIPAQSEANVAVDRVLNRYLKAKVDNASDDEADPEEDYKKRLDV 540
Query: 571 VLRYTEGLCWVMHYYYEG------------------VCSWQWFYPYHY------------ 600
+ W YY E + QW Y+Y
Sbjct: 541 QMT-----AWKKDYYKEKLEIDYSDDEAMGKLAFRYIEGLQWVLHYYYDGVASWGWFYDY 595
Query: 601 --APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
AP SDLK++ + FELG PF+PF+QL+GV P+ S+ +P +R LMTDPNSPI D
Sbjct: 596 HYAPKISDLKNVGEMKFEFELGKPFRPFDQLMGVLPALSNQHIPFAFRDLMTDPNSPIID 655
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
FYP++FE D+NGK+ W+ + K+PFIDE RLLD + K E L EE +RN + F
Sbjct: 656 FYPSNFEADLNGKKQDWEAVVKIPFIDEKRLLDALNKREIYLGIEERKRNGFGSSREFT 714
>gi|270007014|gb|EFA03462.1| hypothetical protein TcasGA2_TC013457 [Tribolium castaneum]
Length = 1531
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 268/718 (37%), Positives = 378/718 (52%), Gaps = 137/718 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP + V E +IPV +DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYPCLSEFVKE--------YQIPV-----------FDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D T +++F +F YI+ LF M++P+K+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 MCSHPDDNNPHFRITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++KDA E++ E +++G KLP D + FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKDA-------EKMELEAKKKGEKLP---DVERFDSNCITPGTEFMARLHEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K K+ILS PGEGEHKIM Y+R R+ PGYDPNTRHCLYGLDADLIM
Sbjct: 152 VSKVSTDNMWKKCKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L TH+ HFS+LRE V +F +K VP
Sbjct: 212 LGLCTHDPHFSLLREEV-------------------------------KFGKKAKRSNVP 240
Query: 299 KK-PYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
++ + LH+ +REYL+ EF + + D+E I+DD+I M F VGNDF+P++
Sbjct: 241 EEIRFYLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIENIIDDWILMGFLVGNDFIPNL 300
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P L I GA+ +L Y + L GY+ + +L R E F++ + + + F++ +
Sbjct: 301 PNLHISNGALPVLYKAYIEVLPTLDGYINEAGTLNLERFEKFMKKLADVDIKNFEE-IQD 359
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ ER KA A P S PV +G P+ +E + D
Sbjct: 360 DLTYFERKTGRKATAHL---------PVSSKPVK--NGEEKKIDPA-----LAELIAATD 403
Query: 472 NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNS 531
+ +S ++I + EA S++ + NK EF+ +E++R++++ +
Sbjct: 404 SLAVSSD------EEDFESSISSEEDEAFKSYKDEYYRNKLEFQEVTREVMREQAEGY-- 455
Query: 532 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 591
+ W Y Y G+C S
Sbjct: 456 ---------VRAIQWNLNY-----------------------YYNGVC-----------S 472
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W WFYP+HY+P+ SD+K I FELG PFKP+ QLL V P AS LPE Y LMTD
Sbjct: 473 WSWFYPHHYSPYISDIKGFSDLKIDFELGKPFKPYEQLLAVLPPASKKLLPECYHSLMTD 532
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
NS I +YP +F+ D+NGKR W+ + +PFIDE LL+ +K LT EEA+RN+
Sbjct: 533 DNSLIKSYYPEEFQTDLNGKRQEWEAVVLVPFIDEKNLLNAMKPCNELLTPEEAKRNN 590
>gi|189237444|ref|XP_974750.2| PREDICTED: similar to 5-3 exoribonuclease 1 [Tribolium castaneum]
Length = 1485
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 268/718 (37%), Positives = 378/718 (52%), Gaps = 137/718 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP + V E +IPV +DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYPCLSEFVKE--------YQIPV-----------FDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D T +++F +F YI+ LF M++P+K+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 MCSHPDDNNPHFRITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++KDA E++ E +++G KLP D + FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKDA-------EKMELEAKKKGEKLP---DVERFDSNCITPGTEFMARLHEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K K+ILS PGEGEHKIM Y+R R+ PGYDPNTRHCLYGLDADLIM
Sbjct: 152 VSKVSTDNMWKKCKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L TH+ HFS+LRE V +F +K VP
Sbjct: 212 LGLCTHDPHFSLLREEV-------------------------------KFGKKAKRSNVP 240
Query: 299 KK-PYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
++ + LH+ +REYL+ EF + + D+E I+DD+I M F VGNDF+P++
Sbjct: 241 EEIRFYLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIENIIDDWILMGFLVGNDFIPNL 300
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P L I GA+ +L Y + L GY+ + +L R E F++ + + + F++ +
Sbjct: 301 PNLHISNGALPVLYKAYIEVLPTLDGYINEAGTLNLERFEKFMKKLADVDIKNFEE-IQD 359
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ ER KA A P S PV +G P+ +E + D
Sbjct: 360 DLTYFERKTGRKATAHL---------PVSSKPVK--NGEEKKIDPA-----LAELIAATD 403
Query: 472 NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNS 531
+ +S ++I + EA S++ + NK EF+ +E++R++++ +
Sbjct: 404 SLAVSSD------EEDFESSISSEEDEAFKSYKDEYYRNKLEFQEVTREVMREQAEGY-- 455
Query: 532 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 591
+ W Y Y G+C S
Sbjct: 456 ---------VRAIQWNLNY-----------------------YYNGVC-----------S 472
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W WFYP+HY+P+ SD+K I FELG PFKP+ QLL V P AS LPE Y LMTD
Sbjct: 473 WSWFYPHHYSPYISDIKGFSDLKIDFELGKPFKPYEQLLAVLPPASKKLLPECYHSLMTD 532
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
NS I +YP +F+ D+NGKR W+ + +PFIDE LL+ +K LT EEA+RN+
Sbjct: 533 DNSLIKSYYPEEFQTDLNGKRQEWEAVVLVPFIDEKNLLNAMKPCNELLTPEEAKRNN 590
>gi|365987598|ref|XP_003670630.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
gi|343769401|emb|CCD25387.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
Length = 1034
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/432 (49%), Positives = 291/432 (67%), Gaps = 14/432 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P ++D VK+P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDNVKLPLDYSLPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA ++ A EE LRQ+ E + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIENEAREEILRQKEEIGEMIDDAVKNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKSLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + G + N + KR E D +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRRR----GNTLADSINMSEEEKRLIQEQD--------AQ 287
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LHI TLR+YL E IP PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 288 KPFLWLHISTLRDYLSAELWIPRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 347
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T + +L VE ++ +GS E IF+ R R E I
Sbjct: 348 SIDILLDIWKVVLPNLKTYMTCDGELNLESVEMLLKQLGSRESDIFKTRHIQEIRKQESI 407
Query: 420 KREKAQARRGDD 431
+R K Q + G++
Sbjct: 408 QRRKLQRQNGNN 419
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 140/228 (61%), Gaps = 9/228 (3%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
++ V+L EPG++ERYY+ K + E+ E RK +V Y EG+ WV+ YYY+G SW W+
Sbjct: 594 DEAVRLFEPGYRERYYKAKCYV-SDEDIESLRKGMVKSYIEGVSWVLLYYYQGCASWNWY 652
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA D + ++ FELG PF PF QL+ V P+AS H LP +R LM++P+SP
Sbjct: 653 YPYHYAPFAQDFFGITDMDVKFELGEPFLPFEQLMSVLPAASGHTLPSIFRPLMSEPDSP 712
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP +F +DMNGK+ SWQGI+ LPFIDE RLL V++ LT+ E RN +L
Sbjct: 713 IIDFYPAEFPIDMNGKKMSWQGISLLPFIDEKRLLKTVREQYPKLTDYEKSRNVRKEAVL 772
Query: 716 FVLLSHPLSASIYTLDEHCKQL--KIKERVEVKERLNPELSDGMNGYI 761
+ S ++ K+L + ++E E L G++G +
Sbjct: 773 LI------SNKNANYEKFTKKLYKSVDGKIETAELLFHHFKSGLSGIV 814
>gi|401842124|gb|EJT44395.1| XRN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1526
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 270/769 (35%), Positives = 411/769 (53%), Gaps = 99/769 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF + YID LF ++P K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPNKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ +++ E G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA------EKAMKKAIEN-GDEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W ++++I S VPGEGEHKIM+++R ++ ++ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+TH HF++LRE V T G++ N E K+ +
Sbjct: 212 LGLSTHGPHFALLREEV-TFGRR--------------NSEKKS---------------LE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ LREY++ EF+ FE D E I+DDFI + F +GNDFLP++P L +
Sbjct: 242 HQNFYLLHLSLLREYMELEFKEIADEMRFEYDFERILDDFILVMFVIGNDFLPNLPDLHL 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---ARLHQ 413
+GA +L+ +K+ GY+ + K +L+R+ ++ + +E F+K
Sbjct: 302 NKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGVWLDYLSQFELLNFEKEDIDVEWFN 361
Query: 414 RHAERIKR--EKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ E I E+ + R G + Q + + + +L SP E + L+
Sbjct: 362 KQLENISLDGERKRQRVGKKLLVKQQKKLIGSIKPWLMEQLQGKISPD--LPDEKIPTLE 419
Query: 472 NGKGTSGRPHKVPRLSSGATIGAAIV--EAENSF-------ETDPQENKEEFKAKL---K 519
+ + H +G I +++N++ +P E EEF+ ++ +
Sbjct: 420 LPRDLDIKDHLEFLKEFAFDLGLFITHSKSKNTYSLKLDLDSINPDETDEEFQNRVNSTR 479
Query: 520 ELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ ++ +A ++ EE +K E WK YY +K K + EE D+ Y
Sbjct: 480 KTIKKYQNAIIVEDKEELETEKTIYNERFEHWKHEYYRDKL--KYASDCEERVTDLSKDY 537
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVF 633
EGL WV++YYY G SW W+YP+HYAP SDL K LDQ +I F+L PF PF QL+ V
Sbjct: 538 VEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQ-DIEFDLSKPFTPFQQLMAVL 596
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S + +P +R LM D SPI DFYP + ++D NGK W+ + + F+DE RL++ +
Sbjct: 597 PERSKNLIPPAFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVDEKRLIEAM 656
Query: 694 KKIEHTLTEEEARRNSIMADMLF-------VLLSHPLSASIYTLD-EHC 734
+ L+ EE RN D+++ V+ PL ++ HC
Sbjct: 657 QPYLSKLSPEEKTRNQFGKDLIYSFNPQVDVIYKSPLGGIFSDIEHNHC 705
>gi|260949235|ref|XP_002618914.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
gi|238846486|gb|EEQ35950.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
Length = 1430
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/714 (37%), Positives = 391/714 (54%), Gaps = 91/714 (12%)
Query: 55 MNGIIHPCFHPE-DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H C H + D T D+++ +F+YID LF +++P+++ YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSDNDTLTRMTDDQMYAAIFNYIDHLFDIIKPKEVFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QRSRRFR + +A EE LR+ + ++ PK D FDSN ITPGTEFMA L+
Sbjct: 61 QRSRRFRTAYEA------EENLRKAISQ--GEVIPKEDP--FDSNAITPGTEFMAKLTNN 110
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+IH ++ D W IKVILS VPGEGEHKIM ++R ++ Y+PN RHC+YGLD
Sbjct: 111 LKYFIHKKITEDNRWANIKVILSGHEVPGEGEHKIMQFIRSMKSQDDYNPNLRHCIYGLD 170
Query: 234 ADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML L TH+ HFS+LR EVVF P ++ K+G+ E+
Sbjct: 171 ADLIMLGLVTHDPHFSLLREEVVFGPS---------------------SRNKSGDIHEQN 209
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
+ LH+ LREY+ EF+ PFE E ++DDFI + + +GNDFLP+
Sbjct: 210 ---------FYLLHLSLLREYMGLEFQDLEGELPFEYSFERVLDDFILIMYVIGNDFLPN 260
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR-- 408
+P L I +GA L+ +K+ + + GYL +G K + +R +++ + +E F+K+
Sbjct: 261 LPDLHINKGAFPFLIGAFKESLKHMDGYLNEGGKINFKRFGTWLEYLSEFELENFEKQNV 320
Query: 409 -ARLHQRHAE--RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 465
A + E I EK + R G + L D VS L +G P Q ++
Sbjct: 321 DAEWFNKRLELISISGEKKRERSG---KLLMLKDEKKLVSILKPWLLETGVLPIS-QLTD 376
Query: 466 CVGRLDNGKGTSGRPHKVPRL------SSGATIGAAIVEA------ENSFETD---PQEN 510
+ + T P + + + G IV + E + + D P E
Sbjct: 377 LANK--DALPTCSLPSDLAKAHMEFLKTFALETGILIVHSRSNDTYEATIDVDGISPYET 434
Query: 511 KEEFKAKLKELLRDKSDAFNSDN--PEEDKVKLGEPGWKER-------YYEEKFNAKTPE 561
++EF ++ LR + S N E+ +K + + E+ YY++K + +
Sbjct: 435 EDEFNERVVN-LRKTIKNYQSSNLVATEETMKEAKDLYDEKFVRAKDEYYKKKLHFSIHD 493
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDL---DQFN 614
EE + Y EGL WV++YYY+G SW W++ YHYAP SD +KD+ +Q
Sbjct: 494 --EEKMIEFTRHYLEGLQWVLYYYYKGCASWNWYFRYHYAPRISDVAMGVKDMLEKNQDE 551
Query: 615 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
I F+L PFKPF QL+ V P+ S +P+ YR LMTD +SPI DFYP + E+D+NGK S
Sbjct: 552 IHFDLATPFKPFEQLMAVLPARSRKLMPDVYRSLMTDEHSPIIDFYPHEVEIDLNGKTAS 611
Query: 675 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY 728
W+ + L F+DE RLL+ +K IE LT E +RNS D++F+ +P + ++Y
Sbjct: 612 WEAVVLLSFVDEKRLLEALKPIEAKLTPAETKRNSYGQDVIFI--RNPQNDNVY 663
>gi|322696208|gb|EFY88004.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 1386
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/693 (36%), Positives = 375/693 (54%), Gaps = 73/693 (10%)
Query: 55 MNGIIHPCFHP---EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
MNGIIH C H ED + +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKM 60
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
NQQR+RRFR + DA E+ R++ +EG ++P + + FDSN ITPGTEFMA LS
Sbjct: 61 NQQRARRFRTALDA-------EKAREKAIKEGVEMPKE---EPFDSNCITPGTEFMAKLS 110
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+PN RHCLYG
Sbjct: 111 QQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNPNVRHCLYG 170
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
LDADLIML L +H+ HF +LRE V T G+ +K K+ E + +
Sbjct: 171 LDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEHQ 210
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDF 347
+ LH+ +REYL+ EF+ + F DLE ++DDFI M FFVGNDF
Sbjct: 211 N---------FYLLHLCIVREYLEMEFQELHQEGTLSFPFDLERVIDDFILMAFFVGNDF 261
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
LP++P L I EGA+ + +YK GY+ + ++ R++ + + E F+
Sbjct: 262 LPNLPGLHINEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLELVSFEN 321
Query: 408 RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
+ A + +K +A+ G + A+ LV S R P+ V
Sbjct: 322 DISDEKWFASKQMEKKLEAKTGGSNKN-AKTGQLVITSL---QRDLWKQKIRPFVSKRSV 377
Query: 468 GRLDNGKGTSGRPHKVPR-LSSGATIGAAIVEAEN-------SFETDPQENKEEFKAKLK 519
LD G K + ++ + + E EN SF P +++E + + +
Sbjct: 378 DALDLGITLKAADRKFAQDIADAMHLDWSTKENENGDRHLVLSFPARPGGDEDEDENEEE 437
Query: 520 --------ELLRDKSDAFNSDNPEEDKVKLGE-------PGWKERYYEEKFNAKTPEERE 564
+++ A D E+ + E GWK +YY +KF PE+ E
Sbjct: 438 EEGNLAAFRVIKSYDKALVVDVTSEEAQQQYEKLYNEKYAGWKTKYYLQKFPEWDPEKYE 497
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 624
+ + D+ Y +GL WV+ YYY+G+ SW WFY YHYAP SD+ +++F+ G PFK
Sbjct: 498 KEQIDLCQNYVQGLQWVLFYYYKGIASWPWFYGYHYAPLISDVAKGLNADLNFKKGQPFK 557
Query: 625 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 684
P+ QL+GV P S +P+ Y LMT+PNSPI DFYP DFE+DMNGK+ W+ + K+PFI
Sbjct: 558 PYEQLMGVLPDRSKKIVPKVYHDLMTNPNSPIIDFYPRDFELDMNGKKMDWEAVVKIPFI 617
Query: 685 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+E RLLD + L ++E RN + F
Sbjct: 618 EEKRLLDAMATKNDLLEDDEKSRNGFGVPIKFT 650
>gi|209877046|ref|XP_002139965.1| 5'-3' exoribonuclease [Cryptosporidium muris RN66]
gi|209555571|gb|EEA05616.1| 5'-3' exoribonuclease, putative [Cryptosporidium muris RN66]
Length = 1148
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 271/823 (32%), Positives = 398/823 (48%), Gaps = 143/823 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FY+WL +YPL+V + +E + D V +D + P+ NG E+D LYLDMNGIIH
Sbjct: 1 MGVPTFYKWLCSRYPLIVRSL--KESITEDNVNSKIDLTLPSENG-EFDCLYLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC +P AP E+F + DYIDRLF M+RPR+LLY+AIDGVAPRAKMNQQRSRR++
Sbjct: 58 PCCNPISSIAPINEAEMFTRVCDYIDRLFSMIRPRRLLYLAIDGVAPRAKMNQQRSRRYK 117
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
S + + +QEFE+ G K PP + +DSN+ITPGT FM LS LQ YI
Sbjct: 118 TSMEIENLMQAYSEAKQEFEKLGYKCPPYKEK--WDSNLITPGTPFMERLSACLQVYIRQ 175
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+ ++P W+ + VI SDAN+PGEGEHKI+ ++R QR YDPNTRH LYG DADLIML
Sbjct: 176 KYESEPAWKTLSVIFSDANIPGEGEHKILDFIRKQRCNSNYDPNTRHVLYGADADLIMLG 235
Query: 241 LATHEVHFSILREVVFT-PGQQDKCFLCGQ---PGHLAANCEGKAKRKAGEFDEKGDEVV 296
L+THE +F I+RE + G C L + + + + + G + +
Sbjct: 236 LSTHEQNFFIVRESITNDDGASQICHLYNKLLTENSIDKSVNANNRIRFGPNNSSNLRIY 295
Query: 297 VPKKPYQFLHIWTLREYLDYEF-------------------------------------- 318
K + + + LREYL YEF
Sbjct: 296 SWWKDLEMIDLSVLREYLAYEFKELEEKLSINREKYIENSNNPECTISTEIHEQDNNMKY 355
Query: 319 -----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFR 373
++ N F DLE +DDF+F+CFFVGNDFLP++P I +G+++ L+A+Y K
Sbjct: 356 SKINEKLYNSKFYYDLERCIDDFVFLCFFVGNDFLPNLPAFGIHKGSLDQLLAIYIKVLP 415
Query: 374 ALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVE 433
LG Y+T +++ + F + E + ++ R + R+ K +K +
Sbjct: 416 TLGDYITWEGNINVKSIGLFFFYLKDLELDVLKEDTRFNNRNNISNKDQK---------D 466
Query: 434 PLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIG 493
++P V +F+G ++ V R+ K + + ++ G G
Sbjct: 467 IFSKPKIDVNKVKFNGIDAYF---------NDHVNRILQFKDNNCETYMTDKVRLGD--G 515
Query: 494 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 553
+ + K KL L+ + D N D E+ + + +E
Sbjct: 516 DVDIWRLRYY---------SIKFKLDLLVLNLKD-INQDETIENNLDID---------KE 556
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL--- 610
+ ++ E ++V Y GL WV+ YYY GV SW WFYPYHYAP DL ++
Sbjct: 557 TIDNNLYQKLSEFSREVGYHYIRGLSWVLKYYYHGVPSWDWFYPYHYAPLVVDLANMAAS 616
Query: 611 ----------------------------------------DQFNIS--------FELGHP 622
+ FN S F G P
Sbjct: 617 DLRKIGIKDVSIPDTIIKSVNICDGDSNNICNENELSVNSNTFNFSIENAILAPFSQGVP 676
Query: 623 FKPFNQLLGVF-PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
F P+ QL+ V P++ LP ++M+D SP+ +FYP F+ D NG + W+ I L
Sbjct: 677 FSPYQQLMAVLPPNSGKKCLPFKLYQMMSDEKSPLKEFYPDKFKEDPNGNKQRWKWIVLL 736
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS 724
PFI++ +LL+ VK +E +++ + RN ++++ LS
Sbjct: 737 PFINQEKLLEHVKPLEVHISDIDKIRNRHGMNIIYTSYFSGLS 779
>gi|222615546|gb|EEE51678.1| hypothetical protein OsJ_33030 [Oryza sativa Japonica Group]
Length = 954
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/394 (56%), Positives = 271/394 (68%), Gaps = 18/394 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWL KYP +V+ +++ V G + P Y NLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDV--GSSSNGAAAPP-----VYHNLYLDMNGIIH 53
Query: 61 PCFHPEDR-----PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
PCFHP+D+ P PTT +EVF MFDY+DRL +VRP LLY+A+DGVAPRAKMNQQR
Sbjct: 54 PCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKMNQQR 113
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPK---SDSQVFDSNVITPGTEFMAVLSI 172
+RRF+++ A + EE LR F EG+K+ P+ S S+V D NVIT GTEFM LS
Sbjct: 114 ARRFKSAMAAKQAEVEENILRDRFRAEGKKVLPRETSSSSEVSDPNVITLGTEFMDKLSD 173
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
AL+YYI RLN+DP W+ I VILSDANVPGEGEHKIMS++R QR GYDPNTRHCLYGL
Sbjct: 174 ALKYYIRARLNSDPLWKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGL 233
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG--EFDE 290
DADLIMLALA+HEVHFSILRE V Q+ P + K K +A E
Sbjct: 234 DADLIMLALASHEVHFSILREEVLHQNNQENTIPI-TPKTFTSQEAEKFKCRAWFPRITE 292
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
E + KKPYQFL+IW LREYL+ + +IPNP +D+E ++DDF+F+CF GNDF+PH
Sbjct: 293 ARPEGKLTKKPYQFLNIWVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPH 352
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 384
+P+LEI EGAI+LL+ VYK F +GGY+ D K
Sbjct: 353 IPSLEIHEGAIDLLIEVYKTSFNKMGGYIVDTDK 386
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 155/281 (55%), Gaps = 30/281 (10%)
Query: 492 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYY 551
+ ++ + + S E D N E + LK++L +K D + + DK+KLG PGWK R++
Sbjct: 483 VKSSQTDGQVSDEQDITMNTLELRKNLKDILHNKQDLIKTGACKHDKIKLGSPGWKSRFF 542
Query: 552 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 611
+EKF+A+T +E + + ++V +Y EGLCWV+ YY+ V SW W+YP++YAPFASD++ L
Sbjct: 543 KEKFDAETKDEIAKLQNEMVQKYLEGLCWVLCYYFADVPSWSWYYPFYYAPFASDVRGLS 602
Query: 612 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
+ S ALP Y KLM S I FYP++ ++D +GK
Sbjct: 603 R-------------------------SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGK 637
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIY 728
RY WQGIAKLPFI++ LL K E L E RRN++ + +F+ S+ L+ A
Sbjct: 638 RYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQ 697
Query: 729 TLDEHCKQLKIKERV-EVKERLNPELSDGMNGYI-SPCAGD 767
T D ++L I E+ L+P+ D NG+ SP D
Sbjct: 698 TSDCSLQKLPIDPATSEIGGWLSPDDDDFSNGFCGSPIEND 738
>gi|406702486|gb|EKD05502.1| hypothetical protein A1Q2_00263 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1568
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/681 (39%), Positives = 360/681 (52%), Gaps = 101/681 (14%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F YID LF ++PRK+ +MAIDGVAPRAKMNQQRSRRFR ++DA + R+E
Sbjct: 4 AIFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREK-------REEA 56
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
R+G LP + + FDSN ITPGT FMA LS L+YY+ R++ D W +KVILS
Sbjct: 57 LRKGETLP---EEKAFDSNCITPGTPFMARLSEHLKYYVRKRISEDAEWRGVKVILSGHE 113
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
VPGEGEHKIM ++R + PGY+PNTRHCLYGLDADL+ML L +H+ HFS+LRE V T G
Sbjct: 114 VPGEGEHKIMDFIRKTKAQPGYNPNTRHCLYGLDADLVMLGLISHDPHFSLLREEV-TFG 172
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ KAK+ V + LH+ LREYLD EF+
Sbjct: 173 R-------------------KAKKN----------VSLANSNMFLLHLSLLREYLDMEFQ 203
Query: 320 --IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGG 377
+ FE DLE I+DD+I M FFVGNDFLPH+P L I EGA+ + +YK+ GG
Sbjct: 204 SVAESISFEYDLERIIDDWILMGFFVGNDFLPHLPGLHINEGALETIWKIYKEILPQAGG 263
Query: 378 YLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR-----LHQRHAERIKREKAQARRGDDV 432
YL D SL R++ + + YE + F++ R E EKA+ ++G +
Sbjct: 264 YLNDKGTISLPRLQLLLDKLSEYEKQRFEEEYMDANWFKGSREKEIAALEKAK-KKGKLI 322
Query: 433 EPLAQPDSLVPVSRFHGSRLASGPSPS---------PYQQSECVGRLDNGKGTSGR---- 479
Q L + F ++ S PS P + + V L +
Sbjct: 323 ITKDQAKILKQIQTFV-TKYQSRPSSKDRLEIVNTLPERDRKFVQELADNLNLRCTWDEE 381
Query: 480 -PHKVPRLSSGATIGAAIVEAENSFETDPQENKE---------------EFKAKLKELLR 523
+ P + G + A E + +T+ QE+ E E +A + +
Sbjct: 382 DSYGQPLIVLGFNVDPADDRPEKTEKTEGQEDGEDAEESEGEWESEEDLESQAAIARVFN 441
Query: 524 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE--------------EREETRKD 569
A DN ED E YE+K N K E + +E
Sbjct: 442 KYDKAKVVDNDIED---------FETSYEDKLNEKLVETKKKYYKEKLDINWDNKEELHP 492
Query: 570 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 629
+V RY EGL W+++YYY+GV +W WFY YHYAP SDLKD+ F F++G PF PF QL
Sbjct: 493 IVYRYIEGLQWILYYYYKGVPAWGWFYNYHYAPMISDLKDIASFKFDFDIGKPFLPFQQL 552
Query: 630 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+GV P+ S +P+ YR LM + SPI DFYP F++DMNGK+ W+ + K+PFI+E RL
Sbjct: 553 MGVLPADSQEHVPQAYRDLMYEDTSPIIDFYPKIFDLDMNGKKQDWEAVVKIPFINEDRL 612
Query: 690 LDEVKKIEHTLTEEEARRNSI 710
L + + E LT EE RN +
Sbjct: 613 LRTMAQREQRLTPEEKGRNRV 633
>gi|401883118|gb|EJT47352.1| hypothetical protein A1Q1_03823 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1499
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/681 (39%), Positives = 360/681 (52%), Gaps = 101/681 (14%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F YID LF ++PRK+ +MAIDGVAPRAKMNQQRSRRFR ++DA + R+E
Sbjct: 4 AIFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREK-------REEA 56
Query: 140 EREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDAN 199
R+G LP + + FDSN ITPGT FMA LS L+YY+ R++ D W +KVILS
Sbjct: 57 LRKGETLP---EEKAFDSNCITPGTPFMARLSEHLKYYVRKRISEDAEWRGVKVILSGHE 113
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPG 259
VPGEGEHKIM ++R + PGY+PNTRHCLYGLDADL+ML L +H+ HFS+LRE V T G
Sbjct: 114 VPGEGEHKIMDFIRKTKAQPGYNPNTRHCLYGLDADLVMLGLISHDPHFSLLREEV-TFG 172
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
+ KAK+ V + LH+ LREYLD EF+
Sbjct: 173 R-------------------KAKKN----------VSLANSNMFLLHLSLLREYLDMEFQ 203
Query: 320 --IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGG 377
+ FE DLE I+DD+I M FFVGNDFLPH+P L I EGA+ + +YK+ GG
Sbjct: 204 SVAESISFEYDLERIIDDWILMGFFVGNDFLPHLPGLHINEGALETIWKIYKEILPQAGG 263
Query: 378 YLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR-----LHQRHAERIKREKAQARRGDDV 432
YL D SL R++ + + YE + F++ R E EKA+ ++G +
Sbjct: 264 YLNDKGTISLPRLQLLLDKLSEYEKQRFEEEYMDANWFKGSREKEIAALEKAK-KKGKLI 322
Query: 433 EPLAQPDSLVPVSRFHGSRLASGPSPS---------PYQQSECVGRLDNGKGTSGR---- 479
Q L + F ++ S PS P + + V L +
Sbjct: 323 ITKDQAKILKQIQTFV-TKYQSRPSSKDRLEIVNTLPERDRKFVQELADNLNLRCTWDEE 381
Query: 480 -PHKVPRLSSGATIGAAIVEAENSFETDPQENKE---------------EFKAKLKELLR 523
+ P + G + A E + +T+ QE+ E E +A + +
Sbjct: 382 DSYGQPLIVLGFNVDPADDRPEKTEKTEGQEDGEDAEESEGEWESEEDLESQAAIARVFN 441
Query: 524 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE--------------EREETRKD 569
A DN ED E YE+K N K E + +E
Sbjct: 442 KYDKAKVVDNDIED---------FETSYEDKLNEKLVETKKKYYKEKLDINWDNKEELHP 492
Query: 570 VVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQL 629
+V RY EGL W+++YYY+GV +W WFY YHYAP SDLKD+ F F++G PF PF QL
Sbjct: 493 IVYRYIEGLQWILYYYYKGVPAWGWFYNYHYAPMISDLKDIASFKFDFDIGKPFLPFQQL 552
Query: 630 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+GV P+ S +P+ YR LM + SPI DFYP F++DMNGK+ W+ + K+PFI+E RL
Sbjct: 553 MGVLPADSQEHVPQAYRDLMYEDTSPIIDFYPKIFDLDMNGKKQDWEAVVKIPFINEDRL 612
Query: 690 LDEVKKIEHTLTEEEARRNSI 710
L + + E LT EE RN +
Sbjct: 613 LRTMAQREQRLTPEEKGRNRV 633
>gi|268533038|ref|XP_002631647.1| C. briggsae CBR-XRN-1 protein [Caenorhabditis briggsae]
Length = 1183
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 276/725 (38%), Positives = 384/725 (52%), Gaps = 95/725 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW +E+YP +++VI E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYP-CLSEVINES-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +E+F +F YI+ L+ +++P+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIKPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F +++ A + ++ Q + G LP + + FDSN ITPGT FM L L ++
Sbjct: 102 FMSARTA------QTQMDQAIAK-GEVLPSE---KRFDSNCITPGTYFMTRLHEKLDAWV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +D W+ K+ILS NVPGEGEHKIM ++R +R GYDPNTRHC+YGLDADLIM
Sbjct: 152 REKSVSDTRWQGRKIILSGHNVPGEGEHKIMDFIRSERAGTGYDPNTRHCMYGLDADLIM 211
Query: 239 LALATHEVHFSILR-EVVFT--PGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
L + +HE HFS+LR EV F P + D+ + K KR E
Sbjct: 212 LGIVSHEPHFSLLREEVTFNTRPRKNDQ--------------KKKPKRTDSEV------- 250
Query: 296 VVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
K + LH+ LREYL +EF + PFE D+E IVDD+I M VGNDFLPH+P+
Sbjct: 251 ----KTFHLLHLSLLREYLAWEFADVKESLPFEYDMERIVDDWIMMGLLVGNDFLPHLPS 306
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
+ I + A+ LL + YKK +L Y+ + +L R E F+ + + F + +
Sbjct: 307 IHIHDDALPLLYSTYKKVLPSL-DYINESGYLNLARFEKFLAQLSLNDKNCF-----MDK 360
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
++ K R G S L + S S + E G ++
Sbjct: 361 LEDDQFMESKKLPRNG---------------SGEEEEELVAFES-SDIEDEEADGEKEDS 404
Query: 474 KGTSGRPHKVPRLSS---GATIGAAIVEAENSFETDPQENKEEFKAKLKEL-LRDKSDAF 529
+ H +S G AE S + D Q +EEF +L L L DA
Sbjct: 405 -SRNNDDHDAAFVSDHEEDKNNGTGKTSAEESPDYDAQFLEEEFNDELATLALSGMDDAD 463
Query: 530 NSDNPEEDKVKLGEPGWKER---YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
++N E K + +K YY +K K + E + Y + W +HYYY
Sbjct: 464 FANNVEACWTKAIDNQFKRHKKYYYSDKLRYKNISKAE--LRAQAEGYVRAIQWNLHYYY 521
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
G SW WFYP+HYAPF SD++ I FEL PF+PF QLL V P AS LP +
Sbjct: 522 HGCVSWSWFYPHHYAPFISDVQGFADMKIEFELSKPFQPFEQLLAVLPEASRDCLPRPLQ 581
Query: 647 KLM-TDP-NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+LM +DP S I DFYP+ FE D+NGK+ W+ + +PFI+E RLL+ ++ ++ L++EE
Sbjct: 582 ELMSSDPAQSAIHDFYPSKFETDLNGKKNDWEAVVLIPFIEEKRLLEAIESKQNRLSQEE 641
Query: 705 ARRNS 709
RN+
Sbjct: 642 KMRNT 646
>gi|156845531|ref|XP_001645656.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156116322|gb|EDO17798.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 1521
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 274/781 (35%), Positives = 411/781 (52%), Gaps = 120/781 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P ++ +I+ +IP E+DNLYLDMN I H
Sbjct: 1 MGIPKFFRYISERWPTILQ--------LIENDQIP-----------EFDNLYLDMNSIFH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D + + +EVFQ +F+YID LF ++P+K YMAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHGNDIDSTKRRLSEEEVFQNIFNYIDHLFNTIKPKKKFYMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR++ DA E +++ E G +LP + FD+N ITPGTEFMA L+ ++Y+
Sbjct: 102 RFRSAMDA------ENAMKKAIEN-GDELP---KGEPFDTNSITPGTEFMAKLTKNIKYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
IH ++++D W I++I S VPGEGEHKIM ++R R+L YDPNTRHC+YGLDADLI
Sbjct: 152 IHNKISSDSNWRNIEIIFSGHEVPGEGEHKIMDFIRSIRSLDTYDPNTRHCIYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L+TH+ HF++LRE V Q++ L+A +
Sbjct: 212 MLGLSTHDPHFALLREEVRFGNQRN----SSNNSTLSA---------------------L 246
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
K+ + LH+ LR+YL+ EF+ F+ D E ++DDFI + F +GNDFLP++P L
Sbjct: 247 DKQNFYLLHLSLLRQYLNLEFKEVADGINFKYDFEKVLDDFILIMFVIGNDFLPNLPDLH 306
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLH 412
+ +GA +++ +K+ L G++ + K +L+R+ ++ + +E F+K
Sbjct: 307 LNKGAFPVILQTFKEALLHLDGHINENGKINLQRLSVWLNYLSQFELMNFEKDDIDVEWF 366
Query: 413 QRHAERIKREKAQAR-RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ E I E + R R V L Q +V + + +L + P + E L+
Sbjct: 367 NKQLENISLEGERKRIRQGKVLLLKQQKKIVGLVKPWLLKLNAKPISDLSKVDEKALVLE 426
Query: 472 -NGKGTSGRPHKVPRLSSGATIGAAIVEAEN----SFETD-----PQENKEEFKAKLKEL 521
N + + S +G I+ +++ S + D P E +EE ++K +
Sbjct: 427 LNDQPIVENLDFLKEFS--FELGLFIIHSKSKDTYSLKLDIDSINPSETEEEHIERIKSM 484
Query: 522 ---LRDKSDAFNSDNPEE---DKVKLGE--PGWKERYYEEKFN--------------AKT 559
+ S+A ++ EE ++ E WK YY+EKFN ++T
Sbjct: 485 KVTFKKFSNAILVEDQEELDTEQEIYNERFENWKTDYYKEKFNFFQKERVLKPFSDSSET 544
Query: 560 PEEREETRK---------------------DVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
E+ E + + ++ Y EGL WV++YYY G SW W+Y Y
Sbjct: 545 NEQEEHSIESEFIDRPKFEYIITDDENKLTELCKNYVEGLQWVLYYYYRGCPSWNWYYKY 604
Query: 599 HYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAP SDL + LDQ SF+L +PF PF QL+ V P S + +P R LM + SPI
Sbjct: 605 HYAPRISDLTRGLDQ-TTSFDLSNPFTPFEQLMAVLPERSKNLIPPVLRPLMYEEISPIL 663
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
D YP + E+D NGK W+ + LPF+DE RL+D +K L+ EE RN D+ F+
Sbjct: 664 DLYPNEVELDKNGKTADWEAVVLLPFVDENRLIDAMKPHLAKLSPEEKERNQFGKDLTFM 723
Query: 718 L 718
Sbjct: 724 F 724
>gi|254579256|ref|XP_002495614.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
gi|238938504|emb|CAR26681.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
Length = 1012
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/437 (48%), Positives = 288/437 (65%), Gaps = 17/437 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ VIEE+P V+DGV +P+D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVIEEQPQVVDGVTLPIDYTAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAVLSIALQYYIH 179
++KDA ER+ QE E+ G + ++ +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SAKDAQIENENRERIMQEREQLGEIIDGAVKTKKTWDSNAITPGTPFMDKLAAALRYWCS 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM++VR QR Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADAQYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF +LRE VF G + L + N + K+ + D +
Sbjct: 240 GLATHEPHFKVLREDVFAQGNNKRHNLKD-----SLNMSEEEKQMIAKQDS--------E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 KPFLWLHISVLREYLSAELWVPRMPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K + Y+T + +L VE + +GS E IF+ R R E
Sbjct: 347 SIDILLDIWKVVLPTMKTYITCDGELNLESVEKLLSQLGSREADIFKTRHIQEVRKQENF 406
Query: 420 KREKAQ--ARRGDDVEP 434
+R+KAQ +G D P
Sbjct: 407 ERKKAQRNVSKGQDRHP 423
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 118/182 (64%), Gaps = 1/182 (0%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+ VKL EPG+ ERYY EKF+ +P + RKD+V Y EG+ WV+ YYY+G SW W+
Sbjct: 606 DQAVKLHEPGYHERYYTEKFHI-SPNHIDALRKDLVKCYIEGVSWVLLYYYQGCASWTWY 664
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAP A+D + F G PF P+ QL+ V P+AS H LP +R LM+ P+S
Sbjct: 665 YPYHYAPLAADFFGFSDIKVEFPPGKPFLPYEQLMSVLPAASGHTLPPIFRPLMSSPDSE 724
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYPT+F VDMNGK+ WQGIA LPFIDE RLL V+ LTEEE RN + +L
Sbjct: 725 IIDFYPTEFPVDMNGKKMPWQGIALLPFIDEKRLLQVVRAQYSKLTEEEKSRNVVRNPIL 784
Query: 716 FV 717
+
Sbjct: 785 LI 786
>gi|164424738|ref|XP_960925.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
gi|157070639|gb|EAA31689.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
Length = 1415
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/693 (37%), Positives = 381/693 (54%), Gaps = 82/693 (11%)
Query: 55 MNGIIHPCFHPE--DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
MNGIIH C H + D T +E+F +F+YI+ LF ++P+KL +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHNCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMN 60
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQR+RRFR +A + E+ R + REG++LP + + FDSN ITPGTEFMA LS
Sbjct: 61 QQRARRFR-------TALDNEKARDKAIREGKELPKE---EPFDSNCITPGTEFMAKLSQ 110
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L+Y+IH +++ D W++ +++LS VPGEGEHKIM Y+R R YD N RHCLYGL
Sbjct: 111 QLRYFIHKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLYGL 170
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DADLIML L +H+ HF +LRE V T G+ G +K KA +E+
Sbjct: 171 DADLIMLGLLSHDPHFCLLREEV-TFGR------------------GPSKHKAKGLEEQN 211
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFL 348
+ +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGNDFL
Sbjct: 212 ---------FYLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGNDFL 262
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
P++P L I EGA++L+ +YK+ GY+ +G K +L+R+ ++ +G E R F+
Sbjct: 263 PNLPRLHINEGALSLMFRIYKEILPRGDGYINEGGKVNLQRLGLLLEELGKEEYRFFE-- 320
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ----- 463
H+ + R K L ++ ++ G + + + ++Q
Sbjct: 321 ---HEHEDQSWLRAKKM---------LEDNEAETAKAKTKGKLIVTTNQKNLWKQKIRKF 368
Query: 464 --SECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SFETDPQENKEE 513
+ LD G K V L+ A I A E + SF E++E+
Sbjct: 369 LMNRSTNTLDLGTELKAEDRKFVQDLADTAHIPWATKEDDEGHRHLILSFPERDDESEED 428
Query: 514 FKAK--LKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEK-------FNAKTPEERE 564
+A+ + +++ +A D D E +++++ E K F TPE +E
Sbjct: 429 EEAQSAVLRIIKKYDNAQVLDLTAADSKAAMEVKYQQKFQEWKDKYYAEKFEDWTPENKE 488
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 624
+ + + Y +GL WV++YYY G+ SW WFY YHYAP SD+ + +++F++G PFK
Sbjct: 489 DELRKLTENYVQGLQWVLYYYYRGIASWPWFYRYHYAPLISDVMKGLKADLNFKMGQPFK 548
Query: 625 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 684
P+ QL+GV P S +P Y LMT+PNSPI DFYP DFE+DMNGK+ W+ + K+PFI
Sbjct: 549 PYEQLMGVLPDRSKKIVPTAYWDLMTNPNSPIIDFYPRDFELDMNGKKMDWEAVVKIPFI 608
Query: 685 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DE RLL + L++ E RN + F
Sbjct: 609 DEKRLLAAMGPKNELLSDVEKSRNDFGVALKFT 641
>gi|322703736|gb|EFY95340.1| exonuclease Kem1 [Metarhizium anisopliae ARSEF 23]
Length = 1404
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/700 (36%), Positives = 374/700 (53%), Gaps = 83/700 (11%)
Query: 53 LDMNGIIHPCFHP---EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRA 109
LDMNGIIH C H ED + +E+F +F+YI+ LF ++P++L +MAIDGVAPRA
Sbjct: 19 LDMNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRA 78
Query: 110 KMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 169
KMNQQR+RRFR + DA E+ R++ +EG ++P + + FDSN ITPGTEFMA
Sbjct: 79 KMNQQRARRFRTALDA-------EKAREKAIKEGVEMPKE---EPFDSNCITPGTEFMAK 128
Query: 170 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 229
LS L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+PN RHCL
Sbjct: 129 LSQQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNPNVRHCL 188
Query: 230 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 289
YGLDADLIML L +H+ HF +LRE V T G+ K K+ E +
Sbjct: 189 YGLDADLIMLGLLSHDPHFCLLREEV-TFGRASKA-------------------KSKELE 228
Query: 290 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGN 345
+ + LH+ +REYL+ EF+ + F DLE ++DDFI M FFVGN
Sbjct: 229 HQN---------FYLLHLCIVREYLEMEFQELHQEGTLSFSFDLERVIDDFILMAFFVGN 279
Query: 346 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
DFLP++P L I EGA+ + +YK GY+ + ++ R++ + + E F
Sbjct: 280 DFLPNLPGLHINEGALANMFKIYKAVLPTCDGYINENGVINMARLDKLLTELSKLELVSF 339
Query: 406 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 465
+ + A + +K +A+ G + A+ L+ ++ F R P+
Sbjct: 340 EHDISDEKWFASKQMEKKLEAKNGGSNKN-AKTGQLI-ITSFQ--RDLWKQKIRPFVSKR 395
Query: 466 CVGRLDNGKGTSGRPHKVPR-LSSGATIGAAIVEAEN-------SF-------------E 504
LD G K + ++ + + E EN SF E
Sbjct: 396 SADALDLGITLKAADRKFAQDIADAMHLDWSTKENENGDRHLVLSFPARRGGGEDEDEDE 455
Query: 505 TDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNA 557
+ + N F+ +++ A D E+ + E + E+Y Y +KF
Sbjct: 456 EEEEGNLAAFR-----VIKSYDKALVVDVTSEEAQQQYEKLYNEKYAGWKTKYYLQKFPE 510
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 617
PE+ E+ + D+ Y +GL WV+ YYY+G+ SW WFY YHYAP SD+ ++SF
Sbjct: 511 WAPEKYEKEQIDLCQNYVQGLQWVLFYYYKGIASWPWFYGYHYAPLISDVAKGLNADLSF 570
Query: 618 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 677
+ G PFKP+ QL+GV P S +P+ Y LMT+PNSPI DFYP DFE+DMNGK+ W+
Sbjct: 571 KKGQPFKPYEQLMGVLPDRSKKIVPKVYHDLMTNPNSPIIDFYPRDFELDMNGKKMEWEA 630
Query: 678 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+ K+PFIDE RLLD + L ++E RN + F
Sbjct: 631 VVKIPFIDEKRLLDAMAPKNDLLEDDEKSRNGFGVPIKFT 670
>gi|320580141|gb|EFW94364.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 1369
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/709 (36%), Positives = 385/709 (54%), Gaps = 97/709 (13%)
Query: 73 TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEE 132
T D++F +F YID LF +++P+K+ YMAIDGVAPRAKMNQQR+RRFR SA E
Sbjct: 2 TDDQMFGAIFAYIDHLFNIIKPQKVFYMAIDGVAPRAKMNQQRARRFR-------SAIEA 54
Query: 133 ERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK 192
E+ ++ +EG+++P + FDSN ITPGTEFMA L+ L++YI+ + ++D W+ ++
Sbjct: 55 EQNLEKAIKEGKEIPKEPP---FDSNAITPGTEFMAKLTQNLKFYINQKASSDSRWQNMR 111
Query: 193 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
+ILS VPGEGEHKIM ++R Q+ P YDPNTRHC+YGLDADLIML L HE HF++LR
Sbjct: 112 IILSGHEVPGEGEHKIMDFIRTQKAQPDYDPNTRHCVYGLDADLIMLGLVAHEPHFALLR 171
Query: 253 -EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLR 311
EV F P AN D++ ++ + LHI +R
Sbjct: 172 EEVTFGP---------------KANSHS------------DDDLT--QQTFFLLHISLVR 202
Query: 312 EYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 369
EY++ EF+ FE D E I+DDFI + + +GNDFLP++P L + +GA LL+ +K
Sbjct: 203 EYMELEFQELQDQLSFEYDFERIIDDFILIMYVIGNDFLPNLPDLHLNKGAFPLLIETFK 262
Query: 370 KEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK---RARLHQRHAERIKRE--KA 424
+ R + GY+ + +L+R +++ + +E F+K + + I ++ K
Sbjct: 263 EAIRDMDGYINEFGTINLQRFGKWLEYLSVFELENFEKGEVDVEWFNKQLDNISKQGMKK 322
Query: 425 QARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVP 484
+ R+G ++ L Q V + R R+ S ++ + L++ P +P
Sbjct: 323 RLRQGKEL-LLKQQKKFVGLVREWIYRVYS-------EKFDVKAMLEDESKVPELP--LP 372
Query: 485 RLSSGATIGAAIV--------------EAENSFET-------DPQENKEEFKAKLKELLR 523
R + + I ++ ++++++ +P E EEF ++ E +R
Sbjct: 373 REAFDSEINRDVIAKFLFELGVVVIHSKSQDTYTARLDVDGINPDETDEEFNERV-EGIR 431
Query: 524 DKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNAKTPEEREETRKDVVLRY 574
+ + ED+ L WK YY++K + E+ +D+ Y
Sbjct: 432 RVIKKYQTAIVVEDEETLESQKDLYDARFVKWKNEYYKKKVGFSLND--EDKIRDMAENY 489
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
EGL WV++YYY+G+ SW W+Y YHYAP SD+ I+FE GHPFKPF QL+ V P
Sbjct: 490 IEGLQWVLNYYYKGISSWPWYYRYHYAPRISDVSKGLNVKINFEKGHPFKPFQQLMAVLP 549
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
+ S +P YR LMTD NSPI DFYP D EVDMNGK+ W+ + L F+DE RL++ +
Sbjct: 550 ARSKELIPTVYRPLMTDSNSPIIDFYPDDCEVDMNGKKAPWEAVVLLSFVDEKRLIEAMA 609
Query: 695 KIEHTLTEEEARRNSIMADMLF-------VLLSHPLSASIYTLDEHCKQ 736
+ L+ EE +RNS D+ F L+ PL AS + HC +
Sbjct: 610 PFDSKLSPEEKQRNSFGTDLQFHFNPQIKHLIKSPLPASFSDFESHCTE 658
>gi|396493104|ref|XP_003843954.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
gi|312220534|emb|CBY00475.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
Length = 1096
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/430 (49%), Positives = 285/430 (66%), Gaps = 28/430 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL++KYP +V+ V EE P + IPVD PNPNG E+DNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDEIIPVDRCGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+ AP T ++ +F+Y DR MVRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKAAPKTEADMMMAIFEYTDRCVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEF--EREGRKLPPKSDSQV----FDSNVITPGTEFMAVLSIAL 174
++++AA+ E ++ ++ R S QV +DSN ITPGT FM +L+ +L
Sbjct: 121 SAREAAEKDVERAEFQKVLTAQKASRGEDVTSLEQVVEKTWDSNAITPGTPFMHLLAESL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
QY+ + DP W+ +KVI+SD++VPGEGEHKIM+++R QR++P +DPNT H +YGLDA
Sbjct: 181 QYWCAYKFTTDPSWKDMKVIISDSSVPGEGEHKIMNFIRSQRSMPTHDPNTSHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
DLIML+LATHE HF +LRE VF +DK C CG+ GH+ NC EF + G
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFYDSGKDKTCTRCGRKGHIRNNC---------EFPDDGK 291
Query: 294 EVVVPK------------KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 341
++ + KP+ +LH LREYL E P F+ DLE +DD++FMCF
Sbjct: 292 KLTEEEAAEEWANSEHQLKPFIWLHTNILREYLAVEMDTPKRKFKYDLERSLDDWVFMCF 351
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
FVGNDFLPH+P+LEIR+ I+LL+++++ + Y+T P +RRV+ + A+ S E
Sbjct: 352 FVGNDFLPHLPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGFPDMRRVQQILSALASRE 411
Query: 402 DRIFQKRARL 411
IF+KR +
Sbjct: 412 ADIFKKRKEV 421
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 14/237 (5%)
Query: 530 NSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGV 589
N+D ED +KL EPG++ERYYE+KF+ + R V +Y EGLCWV+ YY +G
Sbjct: 575 NADETPEDTIKLWEPGYEERYYEQKFHVDPNDI--AFRNKVARQYAEGLCWVLAYYMQGC 632
Query: 590 CSWQWFYPYHYAPFASD---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
SW W++P+HYAPFA+D L+D+D + FE G F P+ QL+GV P+AS+HA+PE +R
Sbjct: 633 PSWTWYFPHHYAPFAADFVGLEDMDPRKL-FEKGTVFHPYEQLMGVLPAASNHAIPEPFR 691
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LM+D +SPI DFYP DF +D+NGK+++WQG+A LPFIDE RLL + LT++E +
Sbjct: 692 PLMSDADSPIIDFYPVDFPIDLNGKKFAWQGVAILPFIDEKRLLAAMATKYPELTDDERK 751
Query: 707 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 763
RN + L S D+ K L K + K ++P S ++G ++P
Sbjct: 752 RNEFGKETLM------FSQESGLFDDVEKALYRKG--QQKHVIDPAKSRALHGEMAP 800
>gi|367000872|ref|XP_003685171.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
gi|357523469|emb|CCE62737.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
Length = 1313
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 256/733 (34%), Positives = 379/733 (51%), Gaps = 85/733 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ V EP G +D LYLDMN I H
Sbjct: 1 MGIPKFFRYISERWPMILQQV---EPDKTPG----------------FDYLYLDMNSIFH 41
Query: 61 PCFHPEDRP----APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
H D TT + ++ +F YID +F+M++P ++YMAIDGVAPRAKMNQQRS
Sbjct: 42 MATHSNDVSDDVGKGTTDEVIYSRIFTYIDHIFLMIKPTTIIYMAIDGVAPRAKMNQQRS 101
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR R + DA + + E E + P FD N ITPGTEFMA L+I L+Y
Sbjct: 102 RRIRTAMDAEKAIDAMKNAIGE-ENWDSSMEP------FDKNSITPGTEFMAQLTINLKY 154
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+IH + ND W ++VI S VPGEGEHKIM Y+R ++ YDPN+RHC+YG DADL
Sbjct: 155 FIHEKKTNDSNWRDVQVIFSGHEVPGEGEHKIMDYIRKLKSQRDYDPNSRHCIYGSDADL 214
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L+TH H ++LRE + + G+ + A E +
Sbjct: 215 IILGLSTHIPHLAVLREEM----------IFGRKKDIRAGLEAQN--------------- 249
Query: 297 VPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ LH+ LREYL+ EF F+ D E I+DDF+ + F +GNDFLP++P L
Sbjct: 250 -----FLLLHMSILREYLELEFEDLKTKLSFKYDFERIIDDFVLILFVIGNDFLPNLPDL 304
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+ +GA +++ +KK +L Y+ +L R+ ++ + +E F+++ Q
Sbjct: 305 HLNKGAFPVILETFKKALMSLDSYINFNGTINLERLGVWLDYLSHFEFMNFKQKVFTVQW 364
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
E++ + + +D L + +L+ S H SP S + R +
Sbjct: 365 FNEQLNKIPTINKNVNDQNDLQKKLNLIN-SMLHWVTKMDTEILSP--SSFAINR----E 417
Query: 475 GTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKE--EFKAKLKELL---------R 523
H +LS G + ++EN + Q + K+ L ELL +
Sbjct: 418 QIKDIYHFFNKLSEGYGFEISKDQSENYIISKTQNANDVNYIKSSLTELLICYEDLIKDQ 477
Query: 524 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMH 583
+K+ + D EDK K WK+ YY+ K E+ R ++ Y EGL WV+
Sbjct: 478 NKTKSNVQDIYNEDKFK----SWKQNYYKSKLEFSETSYGEDLR-NLTANYVEGLQWVLD 532
Query: 584 YYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPE 643
YYY+ SW W+Y YHYAP SDL+D + I F+ PF PF QL+ V PS SS +P
Sbjct: 533 YYYKECPSWSWYYKYHYAPRISDLRDGLKQRIVFDQDEPFTPFQQLMAVLPSRSSKLIPS 592
Query: 644 HYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEE 703
+R LM DP+SPI DFYPT + D NGK W+ + + F+D+ RL++ +K + LT E
Sbjct: 593 IFRPLMLDPSSPIIDFYPTTVKFDKNGKAADWEAVVLISFVDQDRLINAMKPFLNLLTPE 652
Query: 704 EARRNSIMADMLF 716
EA RN+ ++++F
Sbjct: 653 EASRNAHGSNIMF 665
>gi|164658822|ref|XP_001730536.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
gi|159104432|gb|EDP43322.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
Length = 1133
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/404 (51%), Positives = 278/404 (68%), Gaps = 14/404 (3%)
Query: 32 VKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVM 91
V IPVD S+PNPNG EYD LYLDMNGI+HPC HPE +P P T +++ +F Y +R+ M
Sbjct: 9 VDIPVDISRPNPNGEEYDCLYLDMNGIVHPCTHPEGKPPPETEEDMMAEVFKYTERVINM 68
Query: 92 VRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD 151
+RPRKLL MAIDGVAPRAKMNQQRSRRFR+++DA + E+ +E +R+G +
Sbjct: 69 IRPRKLLMMAIDGVAPRAKMNQQRSRRFRSAQDAKILHQQREQELEERKRKGLAGENERI 128
Query: 152 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSY 211
+ +DSN ITPGT FM +L+ +L+Y+I +LN DPGW+ + V+LSDA+VPGEGEHKIM Y
Sbjct: 129 EKSWDSNAITPGTPFMDLLASSLRYWIAHKLNTDPGWKNLCVVLSDASVPGEGEHKIMDY 188
Query: 212 VRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQP 270
+R +R+ P +DPN RH +YGLDADLIML+LATHE HF +LRE VF+ + + C CGQ
Sbjct: 189 IRRKRSDPNHDPNMRHVIYGLDADLIMLSLATHEPHFKVLREDVFSQDAKHRGCHRCGQE 248
Query: 271 GHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLE 330
GH+AANC G+A+ +A F KKP+ FL + TLREYL E R P F DLE
Sbjct: 249 GHVAANCRGEARNEAKPFQ---------KKPFIFLDVPTLREYLQVELRTPGTSFPFDLE 299
Query: 331 CIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 390
+DD++F+ FFVGNDFLPH+P+LEIREGAI+ L+ ++K+E + GY+T+ K L
Sbjct: 300 RAIDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLRIWKRELPNMSGYVTNNGKVELANA 359
Query: 391 EHFIQAVGSYEDRIFQKRARLHQRHAERIKREKA----QARRGD 430
++ + + ED IF+KR +R +R + +A+ GD
Sbjct: 360 QYILDGLAEVEDDIFRKRKETEERQEANKRRHASSNHQEAQHGD 403
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 141/224 (62%), Gaps = 7/224 (3%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED VKL EPG++ERYY +KF + + + R+ VV Y EGLCWV+ YYY+G SW+WF
Sbjct: 652 EDTVKLWEPGYRERYYRQKFGVELSDTK--FRRSVVQAYVEGLCWVLAYYYQGCPSWKWF 709
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA+D D+ +I F PF+PF QL+GV P+AS LP +++LMT+ S
Sbjct: 710 YPYHYAPFAADFTDVQDMHIDFGESEPFRPFEQLMGVLPAASKSNLPVPFQQLMTNEESE 769
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP +F +DMNGK+ +WQG+A LPFIDE RLL + K LT++E RRNS ++L
Sbjct: 770 IIDFYPNEFSIDMNGKKMAWQGVALLPFIDENRLLHALHKRYAQLTDDEVRRNSFGRNVL 829
Query: 716 FVLLSH---PLSASIYT--LDEHCKQLKIKERVEVKERLNPELS 754
FV P+ + +YT D + ++ + P+ S
Sbjct: 830 FVSEDADLFPVMSRLYTKRSDGRADVIDTARHAQIAGTIAPDTS 873
>gi|349581214|dbj|GAA26372.1| K7_Rat1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1006
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/444 (47%), Positives = 290/444 (65%), Gaps = 17/444 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P ++DGV +P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA ++ A EE +RQ E + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + L K E +++ + + +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRNNL-------------KDTINMTEEEKQFLQKQISE 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T +L VE +Q +GS E IF+ R R E
Sbjct: 347 SIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEAF 406
Query: 420 KREKAQAR--RGDDVEPLAQPDSL 441
+R KAQ +G D P + L
Sbjct: 407 ERRKAQKNMSKGQDRHPTVATEQL 430
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 705 ARRN 708
RN
Sbjct: 762 RARN 765
>gi|392296379|gb|EIW07481.1| Rat1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1006
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/444 (48%), Positives = 291/444 (65%), Gaps = 17/444 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P ++DGV +P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA ++ A EE +RQ E + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + +L + K +F +K + +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFLQKQNS----E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T +L VE +Q +GS E IF+ R R E
Sbjct: 347 SIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEAF 406
Query: 420 KREKAQAR--RGDDVEPLAQPDSL 441
+R KAQ +G D P + L
Sbjct: 407 ERRKAQKNMSKGQDRHPTVATEQL 430
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 705 ARRN 708
RN
Sbjct: 762 RARN 765
>gi|443927373|gb|ELU45871.1| 5'-3' exoribonculease Dhp1 [Rhizoctonia solani AG-1 IA]
Length = 1086
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/481 (47%), Positives = 306/481 (63%), Gaps = 50/481 (10%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVI---DG--VKIPVDTSKPNPNGLEYDNLYLDMN 56
GVPA +RWL++KYP +V+ V+EEEP + DG V++P+DTS PNPNG E D LYLDMN
Sbjct: 7 GVPALFRWLSKKYPKIVSQVVEEEPTRVPDADGNLVELPMDTSTPNPNGFELDCLYLDMN 66
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
GI PAP T +++ +F+Y DR+ M RPRKLL+MAI VAPRAKMNQQRS
Sbjct: 67 GI----------PAPETEEDMMVEVFNYTDRVVSMARPRKLLFMAI--VAPRAKMNQQRS 114
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFRA+++A + E + + FE G + ++ + +DSN ITPGT FM +L+ +L+Y
Sbjct: 115 RRFRAAQEAKEKEEERKEAIKMFEALGHSVSEETTKKAWDSNAITPGTPFMDLLAQSLRY 174
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ + N+DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR PG+DPNTRH +YGLDADL
Sbjct: 175 WVVQKQNSDPGWKNLQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTRHVIYGLDADL 234
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IMLALATHE HF +LRE VF ++ C +CGQ GH AA C GK K EK
Sbjct: 235 IMLALATHEPHFRVLREDVFADSNKNSCRICGQEGHFAAQCTGKPK-------EKDTSKP 287
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
KKP+ FL + LREYL E +PN PF DLE +DD++F+ FFVGNDFLPH+P+LEI
Sbjct: 288 PEKKPFIFLDVAVLREYLAIELNVPNIPFAFDLERAIDDWVFLIFFVGNDFLPHLPSLEI 347
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR------ 410
REGAI+ L+ ++K E +GGYL + + + V+ ++ + ED IF+KR
Sbjct: 348 REGAIDTLLKIWKDELPRMGGYLAEHGQANKANVQIMLEGLAKREDEIFRKRREGPHKTI 407
Query: 411 ---------------LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG 455
+R + KR K + +R + E AQ LV V++ S SG
Sbjct: 408 YIYPVQGELNINYDVAEERQEQNAKRRKVEQQRAKEREQDAQ---LVEVTQ--SSSAPSG 462
Query: 456 P 456
P
Sbjct: 463 P 463
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 164/260 (63%), Gaps = 17/260 (6%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
+ED +KL EPG+KERYY KF A+ + E RK + Y EGLCWV+ YYY+G SW W
Sbjct: 646 QEDTIKLWEPGYKERYYRSKFGAELNDT--ELRKQITTSYMEGLCWVLQYYYQGAPSWTW 703
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
FYPYH+APFA+D +D++ +I F LG PFKP+ QL+GVFP+AS +P ++ LMTD +S
Sbjct: 704 FYPYHFAPFAADFEDVEHMDIKFNLGQPFKPYEQLMGVFPAASRVHIPTPFQSLMTDEDS 763
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYPT+FE+DMNGK+ SWQG+A LPFIDE RLL + + L+++E RRN ++
Sbjct: 764 PIIDFYPTEFEIDMNGKKMSWQGVALLPFIDEKRLLGAMAERYPELSDDEVRRNKWGSNH 823
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI---SPCAGDPHPP 771
++V + L D C L K+R E L+ LS G++G + C D P
Sbjct: 824 IYVSDGNDL------YDFFCG-LYTKQRSEKPIPLDTRLSRGISGTVLHDPACVPDSSYP 876
Query: 772 VFRSPVA--SMEDIMGNQVL 789
SP+ + DI+ N+ L
Sbjct: 877 ---SPLTRVGLPDIVANRTL 893
>gi|151945677|gb|EDN63918.1| 5'-3'-exoribonuclease [Saccharomyces cerevisiae YJM789]
gi|190407386|gb|EDV10653.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259149530|emb|CAY86334.1| Rat1p [Saccharomyces cerevisiae EC1118]
gi|323346498|gb|EGA80785.1| Rat1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763283|gb|EHN04813.1| Rat1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1006
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/444 (48%), Positives = 291/444 (65%), Gaps = 17/444 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P ++DGV +P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA ++ A EE +RQ E + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + +L + K +F +K + +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFLQKQNS----E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T +L VE +Q +GS E IF+ R R E
Sbjct: 347 SIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEAF 406
Query: 420 KREKAQAR--RGDDVEPLAQPDSL 441
+R KAQ +G D P + L
Sbjct: 407 ERRKAQKNMSKGQDRHPTVATEQL 430
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 705 ARRN 708
RN
Sbjct: 762 RARN 765
>gi|444315189|ref|XP_004178252.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
gi|387511291|emb|CCH58733.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
Length = 1063
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/461 (47%), Positives = 299/461 (64%), Gaps = 22/461 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V E P V+DGV +P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVSEILPQVVDGVTLPIDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP T DE+ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPAPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA+ E + E E+ G + S+ +DSN ITPGT FM L+ AL+Y+I
Sbjct: 120 SARDASIENQAREAILNEREKIGEIIDESLKSKKTWDSNAITPGTPFMDKLAAALRYWIS 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L D GW+ ++VI+SDA VPGEGEHKIM++VR QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDLGWKNLQVIISDATVPGEGEHKIMNFVRAQRGDPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + K L N + K+ + D +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKKHKLKD-----TMNMTEEEKQLISKQDS--------E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P+L++RE
Sbjct: 287 KPFLWLHLSVLREYLSAELFVPRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T + L+ VE +Q VGS E IF+ + R E +
Sbjct: 347 SIDILLDIWKTLLPQLKTYMTCDGRLDLKAVELLLQQVGSRESDIFRTKHIQQVRKKESL 406
Query: 420 KRE---KAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASG 455
+R+ K++ R + D +PL P + + HG+ LA G
Sbjct: 407 QRKNIRKSERRTAKDQDKQPLI-PTEQLQLYDTHGN-LAKG 445
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 5/193 (2%)
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
KS ++D P KL EPG+KERYY KF+ K+ +E E RKD+V Y EG+ WV+ Y
Sbjct: 609 KSGVIDTDKP----TKLYEPGYKERYYVNKFHIKS-DEIEALRKDMVKSYIEGVAWVLLY 663
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY+G SW+WFYPYHYAP SD N+ F PF PF QL+ V P+AS H LP
Sbjct: 664 YYQGCASWEWFYPYHYAPLPSDFYGFSNMNVEFGESEPFLPFEQLMSVLPAASGHTLPAI 723
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+R LM+ P+S I DFYP +F +DMNGK+ +W GIA LPFID RLL V+ LT+ E
Sbjct: 724 FRPLMSSPDSEIIDFYPEEFPIDMNGKKMAWHGIALLPFIDATRLLKVVRDQYPKLTDAE 783
Query: 705 ARRNSIMADMLFV 717
RN +L +
Sbjct: 784 RSRNVRNKPILLI 796
>gi|367010234|ref|XP_003679618.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
gi|359747276|emb|CCE90407.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
Length = 1030
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/444 (47%), Positives = 292/444 (65%), Gaps = 17/444 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P V+DGV +P+D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQVVDGVTLPIDYAAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA E++ +E E+ G + + + +DSN ITPGT FM L+ AL+Y+I
Sbjct: 120 SARDAQVENEAREQVMREREQVGEFIDDSVKNKKTWDSNAITPGTPFMDKLAAALRYWIS 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L+ DPGW+ ++VI+SDA VPGEGEHKIM++VR QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLSTDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + + N + K+ + D +
Sbjct: 240 GLATHEPHFKILREDVFAQNNRKRHNFTD-----SLNMTEEEKQLIAKQDS--------E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LHI LREYL E +P +LE +DD++FMCFF GNDFLPH+P+L++RE
Sbjct: 287 KPFLWLHISVLREYLAAELWVPKLSMPFNLERAIDDWVFMCFFCGNDFLPHLPSLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K +L Y+T + +L+ VE + +G+ E IF+ R R E I
Sbjct: 347 SIDILLDIWKVVLPSLKSYMTCDGELNLQSVEMLLGQLGAREGDIFKTRHIQEVRKQEAI 406
Query: 420 KREKAQ--ARRGDDVEPLAQPDSL 441
+R K Q +G D P + L
Sbjct: 407 QRRKLQRNVSKGQDRHPTVPSEQL 430
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 127/193 (65%), Gaps = 5/193 (2%)
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
+S F+SD +VKL EPG++ERYY KFN K E E RKD+V RY EG+ WV+ Y
Sbjct: 595 RSGVFDSD----VEVKLYEPGYRERYYVAKFNIKE-SEIEALRKDLVRRYVEGVSWVLAY 649
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY+G SW W+YPYHYAPFASD + + FE G P P+ QL+ V P+AS+H LP
Sbjct: 650 YYQGCASWDWYYPYHYAPFASDFFGIADMKVEFEEGEPILPYEQLMSVLPAASAHTLPSI 709
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
++ LM++P+S I DFYPT+F +DMNGK+ SWQGIA LPFI+ RLL V+ LTE E
Sbjct: 710 FKPLMSEPDSEIIDFYPTEFPIDMNGKKMSWQGIALLPFIEAKRLLRVVRNQYSRLTEYE 769
Query: 705 ARRNSIMADMLFV 717
RN +L +
Sbjct: 770 RSRNVCKEPVLLI 782
>gi|156839563|ref|XP_001643471.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114083|gb|EDO15613.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 1292
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 262/755 (34%), Positives = 399/755 (52%), Gaps = 110/755 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R++ E++PL++ +IE N N E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYICERWPLIL-QLIE------------------NDNVPEFDNLYLDMNSILH 41
Query: 61 PCFH-----PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
C H E P T +E+F +F YID LF +++P+K+ YMAIDGVAPRAKMNQQR
Sbjct: 42 SCSHGDRGDTEGIIKPLTEEEIFTRIFIYIDHLFQLIKPKKVFYMAIDGVAPRAKMNQQR 101
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
SRRFR +A E E+ + G + + + FD N ITPGT FM L+ L+
Sbjct: 102 SRRFR-------TAMENEKAMNKIIENGGVIS--EEIKPFDPNAITPGTTFMEKLTKYLK 152
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y+IH +++ND W I++ILS VPGEGEHKIM Y+R +R+ GY+PN RHC+YGLDAD
Sbjct: 153 YFIHDKISNDINWANIEIILSGHEVPGEGEHKIMDYIRKKRSQKGYNPNLRHCIYGLDAD 212
Query: 236 LIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LI+L L+TH HF+ILR EV FT ++K K G
Sbjct: 213 LIILGLSTHAPHFAILREEVTFTKTLKNK--------------------KTG-------- 244
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ + + FL + LREYL+ EF+ I N ++ D E I+DDFI + F +GNDFLP++P
Sbjct: 245 --LELQRFYFLQLSLLREYLELEFKDIANKLKYKYDFERILDDFILILFVIGNDFLPNLP 302
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---A 409
L + +GA +++ +K + GY+ + L+R+ +I + +E F+++
Sbjct: 303 DLHLNKGAFPVILETFKLSLLSSEGYINENGTIDLKRLSTWIDYLSKFELMNFKQKEFNE 362
Query: 410 RLHQRHAERIKREKAQARRGDDV------EPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 463
+ + +EK +G+ + + L++ ++ + F ++L + ++
Sbjct: 363 EWFNKQLIALAKEKQADSKGNKLLINNRRKILSKIENWINEEVF-ANQLINENVELRLKR 421
Query: 464 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP--QENKEEFKA----- 516
+ +G D K L ++ + +N + P +EN+ E +
Sbjct: 422 NVIIGNSDFFKA----------LCKDLSLEIVKDKKKNEYLIHPIFKENQGEVETTELGL 471
Query: 517 ---KLKELLRDKSDAFNSDNPEEDKV----KLGE------PGWKERYYEEKFNAKTPEER 563
++K +L+ D++ + DK+ KL E K YY K + +E
Sbjct: 472 QYEEMKNVLKKHKDSYKEFHSTPDKLPKLDKLDEFNNESFTKMKSSYYLRKLSIDITDEE 531
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK-DLDQFNISFELGHP 622
+ T D+ Y EGL WVM+YYY G SW WFY YHYAP SD+ L+Q I FE P
Sbjct: 532 KVT--DLAKNYVEGLQWVMYYYYRGCASWGWFYRYHYAPRISDIYLGLNQ-KIQFEKDDP 588
Query: 623 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 682
F PF QL+ V P S +P +R LM + +SPI DFYP++ ++D NGK W+ + +
Sbjct: 589 FTPFQQLMAVLPERSKELIPTIFRPLMYNQDSPILDFYPSEVKLDRNGKSADWEAVVLIS 648
Query: 683 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
F+D+ RL+ ++ + L ++ARRN D+LF+
Sbjct: 649 FVDQERLVAAMEPLLKDLEPKDARRNKFGTDILFL 683
>gi|302309530|ref|NP_986969.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|442570294|sp|Q74ZA0.4|XRN2_ASHGO RecName: Full=5'-3' exoribonuclease 2
gi|299788402|gb|AAS54793.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|374110220|gb|AEY99125.1| FAGR303Wp [Ashbya gossypii FDAG1]
Length = 945
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/429 (48%), Positives = 291/429 (67%), Gaps = 21/429 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ VIE+ P V+DGVK+P+D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVIEDTPQVVDGVKLPIDYSAANPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++PAP T DE+ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPAPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA + E+ R+ E E G + ++ +D+N ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAKLANEEKARVLAEREAYGEMIDDAVKAKKSWDTNAITPGTPFMDKLAAALRYWTS 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADVQYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF QD Q H + + K+ E D +
Sbjct: 240 GLATHEPHFKILREDVFA---QDNRRRPRQ--HDMMDMSAEEKQALIEQDA--------E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LH+ LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P+L++RE
Sbjct: 287 KPFLWLHVSVLREYLSAELLVPRLPFHFDLERAIDDWVFMCFFCGNDFLPHLPSLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K +L YLT K +L+ VE + +G+ E IF+K ++ + +
Sbjct: 347 SIDILVDIWKAVLPSLKTYLTCDGKLNLKGVEKVLAQLGNRESDIFKK------KYEQEL 400
Query: 420 KREKAQARR 428
++++AQ RR
Sbjct: 401 RKKEAQERR 409
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 121/179 (67%), Gaps = 1/179 (0%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L EPG+ +RYY+ KF+ T + RK VV Y EG+ WV+ YYY+G SW W+YPY
Sbjct: 583 VRLFEPGYHDRYYQAKFHVPT-GSIDALRKKVVRSYVEGISWVLLYYYQGCPSWTWYYPY 641
Query: 599 HYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
HYAPFASD + +++F+LG PF P+ QL+ V P+ASSH LP+ +R LM+DP S I D
Sbjct: 642 HYAPFASDFTGISDLSVTFDLGEPFLPYEQLMSVLPAASSHNLPDVFRSLMSDPESEIYD 701
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
FYP +F +DMNG++ +W+ + LPFIDE RLL V++ L+E E RN ++L +
Sbjct: 702 FYPEEFPIDMNGEKMAWKALVLLPFIDETRLLAAVRQKYPLLSEAERARNVRRDEVLLI 760
>gi|366995071|ref|XP_003677299.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
gi|342303168|emb|CCC70946.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
Length = 1012
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/429 (49%), Positives = 285/429 (66%), Gaps = 21/429 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE P VIDGV +P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEETPQVIDGVTLPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+RP P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DAA ++ A EE LRQ+ E + + +DSN ITPGT FM L+ +L+Y+
Sbjct: 120 SARDAAIENEAREEILRQKEEIGEVIDEAVKNKKTWDSNAITPGTPFMDKLAASLRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ +++I+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF N + + E+ ++++ K
Sbjct: 240 GLATHEPHFRILREDVFAQN----------------NNKRRNFDDTLNMSEEEKQLLLAK 283
Query: 300 ---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
KP+ +LHI LREYL E IP F DLE +DD++FMCFF GNDFLPH+P+L++
Sbjct: 284 DSEKPFLWLHINVLREYLGAELFIPRLSFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDV 343
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
RE +I++L+ ++K L Y+T + +L VE +Q +GS E IF+ R R
Sbjct: 344 RENSIDILLDIWKIVLPNLKTYMTCDGELNLESVEMLLQQLGSREGDIFKSRHIQEVRKQ 403
Query: 417 ERIKREKAQ 425
E +R+K Q
Sbjct: 404 EAYQRKKLQ 412
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 141/227 (62%), Gaps = 6/227 (2%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
++ VKL EPG++ERYY+ K + E E RK +V Y EG+ WV+ YYY+G SW W+
Sbjct: 591 DEAVKLYEPGFRERYYKAKCYV-SDAEIEPLRKGMVRSYVEGVSWVLLYYYQGCASWDWY 649
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFASD D+ + FELG PF P+ QL+ V P+AS H LP +R LM++P+SP
Sbjct: 650 YPYHYAPFASDFFDITNIKVEFELGKPFLPYEQLMSVLPAASGHTLPAIFRPLMSEPDSP 709
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYPT+F +DMNGK+ SWQGI+ LPFIDE RLL+ V+ LT E RN + D +
Sbjct: 710 IIDFYPTEFPIDMNGKKMSWQGISLLPFIDEKRLLETVRDQYPKLTPAERSRN-VCNDPV 768
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
++ + + +T K K + EV E G++G +S
Sbjct: 769 LLISNKNANFERFT----KKFYKTENEDEVSEFTFHHFKSGLSGVVS 811
>gi|256273435|gb|EEU08371.1| Rat1p [Saccharomyces cerevisiae JAY291]
Length = 1006
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/426 (49%), Positives = 285/426 (66%), Gaps = 15/426 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P ++DGV +P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA ++ A EE +RQ E + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + +L + K +F +K + +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFLQKQNS----E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T +L VE +Q +GS E IF+ R R E
Sbjct: 347 SIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEAF 406
Query: 420 KREKAQ 425
+R KAQ
Sbjct: 407 ERRKAQ 412
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 705 ARRN 708
RN
Sbjct: 762 RARN 765
>gi|6324622|ref|NP_014691.1| Rat1p [Saccharomyces cerevisiae S288c]
gi|417592|sp|Q02792.3|XRN2_YEAST RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Ribonucleic
acid-trafficking protein 1; AltName: Full=p116
gi|172365|gb|AAA34960.1| Rat1p [Saccharomyces cerevisiae]
gi|386005|gb|AAB26818.1| transcription activator [Saccharomyces cerevisiae]
gi|1420179|emb|CAA99240.1| RAT1 [Saccharomyces cerevisiae]
gi|285814937|tpg|DAA10830.1| TPA: Rat1p [Saccharomyces cerevisiae S288c]
Length = 1006
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/444 (47%), Positives = 290/444 (65%), Gaps = 17/444 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P ++DGV +P+D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSASNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA ++ A EE +RQ E + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + +L + K +F +K + +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFLQKQNS----E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T +L VE +Q +GS E IF+ R R E
Sbjct: 347 SIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEAF 406
Query: 420 KREKAQAR--RGDDVEPLAQPDSL 441
+R KAQ +G D P + L
Sbjct: 407 ERRKAQKNMSKGQDRHPTVATEQL 430
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 705 ARRN 708
RN
Sbjct: 762 RARN 765
>gi|299747213|ref|XP_001836883.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
gi|298407417|gb|EAU84500.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
Length = 1156
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/442 (47%), Positives = 292/442 (66%), Gaps = 23/442 (5%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVI-----DGVKIPVDTSKPNPNGLEYDNLYLDMN 56
GVPA +RWL++KYP ++ V EE+ + + V IPV+ ++PNPNG+E+DNLYLDMN
Sbjct: 18 GVPALFRWLSKKYPKIILPVEEEDDIKVPDENDQEVTIPVNMAQPNPNGVEFDNLYLDMN 77
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
GI PAP T +++ +F Y +R+ MVRPRKLL+MAIDGVAPRAKMNQQRS
Sbjct: 78 GI----------PAPETEEDMMVEVFKYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQRS 127
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS-QVFDSNVITPGTEFMAVLSIALQ 175
RRFR++++A + + +E G+K+ + + Q +DSN ITPGT FM +L+ +L+
Sbjct: 128 RRFRSAQEAKEKEEARKEALALWEAMGKKVSDEEKTKQAWDSNAITPGTPFMDLLAASLR 187
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y++ ++N DPGW+ I+VI+SDA+V GEGEHKIM Y+R QR+ PGYDPNT+H +YGLDAD
Sbjct: 188 YWVVQKMNTDPGWKNIQVIISDASVAGEGEHKIMDYIRRQRSNPGYDPNTKHVIYGLDAD 247
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIMLALATHE HF +LRE VF + C +CGQ GH AA C G + +
Sbjct: 248 LIMLALATHEPHFRVLREDVFAQDKSTACRICGQEGHYAAQCTGTKAEIEKKPPPPEKKP 307
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ FL + LREYL+ E +P+ PF DLE +DD++ + FFVGNDFLPH+P+LE
Sbjct: 308 FI------FLDVAVLREYLEVELDVPSSPFRFDLEKAIDDWVLLIFFVGNDFLPHLPSLE 361
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
IREGAI+ L+ ++K+E +GGYL+D +L R + ++ + ED IF++R +R
Sbjct: 362 IREGAIDTLLKIWKQELPRMGGYLSDNGTLNLARAQIILEGLAKREDEIFRRRREAEERQ 421
Query: 416 AERIKREK-AQARRGDDVEPLA 436
A+ KR K QA R P A
Sbjct: 422 AQNAKRRKLEQAHRQGGTGPAA 443
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 148/229 (64%), Gaps = 7/229 (3%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
+ED VKL EPG+KERYY++KF + E R V Y +GL WV+ YYY+G SWQW
Sbjct: 639 QEDTVKLWEPGYKERYYKQKFGVEP--HDIEFRHKVAEAYVQGLAWVLQYYYQGTPSWQW 696
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
+YPYH+APFA+D D+++ +I F LG PFKP+ QL+GVFP+AS +P ++K M D +S
Sbjct: 697 YYPYHFAPFAADFVDVEKMDIKFNLGQPFKPYEQLMGVFPAASRKHIPAVFQKFMVDEDS 756
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
PI DFYP FE+DMNGK+ +WQG+A LPFIDE RLLD + LTE+E +RN ++
Sbjct: 757 PIIDFYPPTFEIDMNGKKMAWQGVALLPFIDETRLLDAMALEYPNLTEDEVKRNQPGHNV 816
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISP 763
LF HP +Y E K+K+ + ++ LS G++G + P
Sbjct: 817 LFAADEHP----VYPFYEALYGKKMKKNAD-PVAIDTALSKGISGQVLP 860
>gi|207341239|gb|EDZ69347.1| YOR048Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1006
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/444 (47%), Positives = 288/444 (64%), Gaps = 17/444 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE+P ++DGV +P+D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA ++ A EE +RQ E + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIENEAREEIMRQREEVGEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDAD L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADFNFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L THE HF ILRE VF + + +L + K +F +K + +
Sbjct: 240 GLTTHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFLQKQNS----E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T +L VE +Q +GS E IF+ R R E
Sbjct: 347 SIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHLGSREGDIFKTRHIQEARKKEAF 406
Query: 420 KREKAQAR--RGDDVEPLAQPDSL 441
+R KAQ +G D P + L
Sbjct: 407 ERRKAQKNMSKGQDRHPTVATEQL 430
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 5/184 (2%)
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
K+ F++D + VKL EPG+ ERYY KF+ TP++ E+ RKD+V Y EG+ WV+ Y
Sbjct: 587 KNGVFDTD----EFVKLFEPGYHERYYTAKFHV-TPQDIEQLRKDMVKCYIEGVAWVLMY 641
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY+G SW WFYPYHYAP A+D I FE G PF P+ QL+ V P+AS HALP+
Sbjct: 642 YYQGCASWNWFYPYHYAPLATDFHGFSHLEIKFEEGTPFLPYEQLMSVLPAASGHALPKI 701
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+R LM++P+S I DFYP +F +DMNGK+ SWQGIA LPFID+ RLL V+ L++ E
Sbjct: 702 FRSLMSEPDSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
Query: 705 ARRN 708
RN
Sbjct: 762 RARN 765
>gi|367005296|ref|XP_003687380.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
gi|357525684|emb|CCE64946.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
Length = 1113
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/430 (47%), Positives = 284/430 (66%), Gaps = 22/430 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE P ++DGV +P+D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEETPQIVDGVALPIDYSSENPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+RP P T DE+ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA E + ++ E G+ + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAKFENEAREEILKDKEAAGQVIDEAVKQKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L+ DPGW+ ++VI+SDA VPGEGEHK+M+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLSTDPGWKNLQVIISDATVPGEGEHKLMNFIRAQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG-EFDEKGDEVVV- 297
LATHE HF ILRE VF G + K K K G + E+ +++
Sbjct: 240 GLATHEPHFKILREDVFAQGSKPK----------------KHNFKDGLDMTEEEKQLITK 283
Query: 298 --PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+KP+ +LHI LREYL E +P F D+E +DD++FMCFF GNDFLPH+P L+
Sbjct: 284 EDSQKPFLWLHINVLREYLSAELWVPRLSFPFDIERAIDDWVFMCFFCGNDFLPHLPCLD 343
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
+RE +I++L+ ++K+ L Y+T + +L VE + +GS E IF+ R R
Sbjct: 344 VRENSIDILLDIWKRILPNLKTYMTCDGELNLESVELLLSQLGSREADIFKTRHLQEVRK 403
Query: 416 AERIKREKAQ 425
E ++R+K Q
Sbjct: 404 KESMERKKQQ 413
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 140/227 (61%), Gaps = 7/227 (3%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+D VKL EPG++ERYY KFN + ++ +KDVV Y EG+ WV+ YYY+G SW W+
Sbjct: 618 DDYVKLYEPGFRERYYASKFNVDE-HDIDQLKKDVVRYYIEGVSWVLLYYYQGCASWNWY 676
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA+D +L +I F+LG PF PF QL+ V P+AS H LPE +R LM+DP S
Sbjct: 677 YPYHYAPFAADFTNLTDISIKFDLGEPFLPFEQLMSVMPAASGHTLPEIFRPLMSDPKSE 736
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP F +DMNGK+ SWQGIA LPFIDE RLL V+ L+++E RN +L
Sbjct: 737 IIDFYPEQFPIDMNGKKMSWQGIALLPFIDETRLLKAVRSKYEFLSDQEKSRNVRKKAIL 796
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
+ S D+ K + ++ KE G++G++S
Sbjct: 797 VI------SNKNANYDQFVKDMYTEKVDAEKEFFFSHFKSGLSGFVS 837
>gi|50293593|ref|XP_449208.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608566|sp|Q6FKN6.3|XRN2_CANGA RecName: Full=5'-3' exoribonuclease 2
gi|49528521|emb|CAG62182.1| unnamed protein product [Candida glabrata]
Length = 1018
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 289/432 (66%), Gaps = 27/432 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE ++DGV +P+D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEPQQLVDGVALPIDYAGPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T D++ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPPPETEDDMLLAVFEYTNRVLNMARPRKVLVIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKDA-ADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYI 178
+++DA ++ A EE +RQ+ E+ G+ + + + +DSN ITPGT FM L+IAL+Y+
Sbjct: 120 SARDAEIENEAREEIMRQK-EQLGQIIDDSVKNKKTWDSNAITPGTPFMDKLAIALRYWT 178
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI
Sbjct: 179 AFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIF 238
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV- 297
L LATHE HF ILRE VF + + K DE+ D +
Sbjct: 239 LGLATHEPHFKILREDVFAQDNRKR---------------NNVKDTIDMTDEEKDLIRKQ 283
Query: 298 -PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+KP+ +LHI LREYL E P PF DLE +DD++FMCFF GNDFLPH+P L++
Sbjct: 284 DSEKPFLWLHISVLREYLSAELWTPKLPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDV 343
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
RE +I++L+ ++K L Y+T K +L VE ++ +G+ E IF+ RH
Sbjct: 344 RENSIDILLDIWKSILPRLKTYMTCDGKLNLESVEMVLKELGNREGDIFKT------RHI 397
Query: 417 ERIKREKAQARR 428
+ I++++A RR
Sbjct: 398 QEIRKKEANERR 409
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 121/182 (66%), Gaps = 1/182 (0%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
++ VKL EPG+ +RYY EKF+ + P + K +V Y EG+ WV+ YYY+G SW W+
Sbjct: 594 DEAVKLFEPGYHDRYYIEKFHIE-PNQIPALSKHMVKCYIEGVSWVLMYYYQGCASWTWY 652
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAP A D D +I FELG PF P+ QL+ V P+AS H LPE +R LM+ +S
Sbjct: 653 YPYHYAPLAEDFVDFHDLDIKFELGEPFLPYEQLMSVLPAASGHNLPEVFRPLMSSEDSE 712
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYPT+F +DMNGK+ SWQGIA LPFIDE RLL + L+E+E RRN+ +L
Sbjct: 713 IIDFYPTEFPIDMNGKKMSWQGIALLPFIDETRLLTATRNQYKFLSEDEKRRNTRNDPVL 772
Query: 716 FV 717
+
Sbjct: 773 LI 774
>gi|190345127|gb|EDK36952.2| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 259/709 (36%), Positives = 380/709 (53%), Gaps = 102/709 (14%)
Query: 55 MNGIIHPCFHP-EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H C H +D + T D+++ +F YI+ LF +++P+ + YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDDTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR+RRFR + +A EE L++ +G ++P K D FDSN ITPGTEFMA L+
Sbjct: 61 QRARRFRTAYEA------EENLKKAIS-QGLEIP-KDDP--FDSNAITPGTEFMAKLTEN 110
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+IH +++ D W + +ILS VPGEGEHKIM+Y+R ++ P Y+ N+RHC+YGLD
Sbjct: 111 LKYFIHKKISTDSRWAETVIILSGHEVPGEGEHKIMNYIRTMKSQPNYNSNSRHCIYGLD 170
Query: 234 ADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML L +H+ HF +LR EV F P ++ K+ + +
Sbjct: 171 ADLIMLGLVSHDPHFCLLREEVTFGP---------------------RSGNKSNDLHD-- 207
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
+ + LHI LREY+ EF+ + FE D E ++DD I + + +GNDFLP
Sbjct: 208 -------QKFFLLHISLLREYISLEFQDMDNDVSFEFDFERVLDDLILIMYVIGNDFLPS 260
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK--- 407
+P L I +GA LL+ +K+ GY+ + +L+R+ +++ + +E F+K
Sbjct: 261 LPDLYINKGAFPLLLETFKQALAESDGYINENGTINLKRLAIWLRHLSEFELENFEKSNV 320
Query: 408 -----RARLHQRHAERIKRE---------KAQARRGDDVEPLAQPDSLVPVSRFHGSRLA 453
RL KR K Q + ++P S + V+
Sbjct: 321 DVDWFNQRLEDISITGGKRRERMGKLLILKDQKKLVGMIKPWLMEYSTMKVADLVQLE-G 379
Query: 454 SGPSPSPYQQSECVGR-LDNGKGTSGRPHKVPRLSSGATIGAAIV--EAENSFET----- 505
G PS +E V + LD K +G IV +++++E
Sbjct: 380 EGKLPSLSLPAEEVSKHLDFIK------------QFALEVGLIIVHSRSKDTYEAKLDID 427
Query: 506 --DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEK 554
P E EE + ++ E +R + S N E + L E WK++YY+EK
Sbjct: 428 GMSPYETDEEHEDRINE-IRKSVKKYQSANLFETEDLLKESRDIYDAKFMKWKDQYYQEK 486
Query: 555 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDL 610
F ++ E ++ Y EGL WV++YYY+G SW W+Y YHYAP SD L+++
Sbjct: 487 FKFSIHDKEEMV--NLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDISIGLENM 544
Query: 611 DQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 668
+ N I+FELG PFKPF QL+ V P+ S +P YR LMT+ +SPI DFYP ++DM
Sbjct: 545 LENNKKITFELGTPFKPFEQLMAVLPARSRKLMPLEYRPLMTESHSPIIDFYPDKVDIDM 604
Query: 669 NGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
NGK SW+ + L F+DE RL++ +K IE LT EE +RNS D+ F+
Sbjct: 605 NGKTASWEAVVLLSFVDEKRLIETLKPIEAKLTPEETKRNSFGTDIEFI 653
>gi|255717294|ref|XP_002554928.1| KLTH0F17116p [Lachancea thermotolerans]
gi|238936311|emb|CAR24491.1| KLTH0F17116p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/424 (48%), Positives = 280/424 (66%), Gaps = 15/424 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+E+ P + DGV +P+D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEDTPQIEDGVALPIDYAGPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+RP P T DE+ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA E ER+ E E G + + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIQNEERERVLLEKEDMGEIIDDSVRNKKTWDSNAITPGTPFMDKLAAALRYWTS 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM++VR QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTSHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + Q N + K + D +
Sbjct: 240 GLATHEPHFKILREDVFAQDNRRR-----QRVQDTINMSEEDKAALLQQDS--------Q 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LHI LREYL E +P FE D E VDD++FMCFF GNDFLPH+P+L++RE
Sbjct: 287 KPFLWLHISVLREYLAVELFVPRLSFEFDTERAVDDWVFMCFFCGNDFLPHLPSLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T + +L VE +Q +G+ E ++F+ R + R E
Sbjct: 347 SIDILVEIWKTILPRLKTYMTCDGELNLDSVELLLQHLGAREPQMFKDRFQQEIRKQEAA 406
Query: 420 KREK 423
KR K
Sbjct: 407 KRRK 410
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 127/184 (69%), Gaps = 5/184 (2%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEERE--ETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
+++VKL EPG+ +RYY KF+ +ER+ + RK+VV Y EG+ WV+ YYY+G SW
Sbjct: 588 DEEVKLFEPGYHDRYYTAKFHI---DERDIDQLRKEVVRSYVEGVSWVLLYYYQGCASWN 644
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
W+YPYHYAPFASD KD+ I+FE G PF PF QL+ V P+AS H LP +R LM++P+
Sbjct: 645 WYYPYHYAPFASDFKDIKDLKITFEKGEPFLPFEQLMSVLPAASGHNLPSIFRPLMSEPD 704
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
S I DFYP +F +DMNGK+ SWQGIA LPFIDE RLL V+ L+ EE RN +
Sbjct: 705 SEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDEKRLLRVVRDQYERLSPEEKARNVRKQE 764
Query: 714 MLFV 717
+L +
Sbjct: 765 VLLI 768
>gi|296817211|ref|XP_002848942.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
gi|238839395|gb|EEQ29057.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
Length = 1412
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 267/750 (35%), Positives = 385/750 (51%), Gaps = 120/750 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPE-DRPA-PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + D PA T D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPAFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E +++ REG ++P K D+ FDSN ITPGTEFM L+ L+Y+I
Sbjct: 102 FRTALDA-------ELAKEKAIREGVEMP-KEDA--FDSNCITPGTEFMTKLTKQLRYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHC
Sbjct: 152 NKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHC---------- 201
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV-V 297
F+I LC R++ + + +E+ +
Sbjct: 202 ---------FTIS--------------LCS--------------RESDVWTAEPEEIKEL 224
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPN----PPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ + LH+ +REYL+ EF+ F D+E ++DDFI M FFVGNDFLP++P
Sbjct: 225 EHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERVIDDFILMAFFVGNDFLPNLPN 284
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + VYK+ LGGY+ + K ++ R+ + A+ E R F+
Sbjct: 285 LHINEGALAWMFKVYKEVLPKLGGYVNEHGKINMERLRTLLAALSDVEFRFFEA------ 338
Query: 414 RHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQSECVG 468
+ K++ GD L PD ++ P + +R+ + P +S
Sbjct: 339 -EYSDARWLKSKTLGGDQTPTL--PDKPNVLTVTPAQKHIFNRIKKYVTHRPMDESGHPV 395
Query: 469 RLDNGKGTSGRPHK-VPRLSSGATIGAAIV-------------EAENSFETDPQENKEEF 514
LD + K V +L+ + + V + + D ++ E
Sbjct: 396 PLDLSPSLPAKDRKFVEQLADSLHLKWSSVLDNHDERFLRLQLPVNSDDDDDDDDDDGES 455
Query: 515 KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEEREETR 567
+ + +L+ +A + ED E +++++ Y+EKF E EE R
Sbjct: 456 QIAILRVLKKYENAKVQETTAEDAQLTAEKKYEKKFQEWKDKYYKEKFGWGL-ENTEEMR 514
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
K + Y +GL WV+ YYY GV SW WFY YHYAP SD+ ++ F+LG PF PF
Sbjct: 515 K-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDIHLGLGADVEFKLGQPFFPFQ 573
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+GV P S +P Y LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE
Sbjct: 574 QLMGVLPDRSKKIVPVAYHSLMTTPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEE 633
Query: 688 RLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
RLL + EH LT +E RN+ + F
Sbjct: 634 RLLKAMATKEHLLTPDEKARNTFGVTLKFT 663
>gi|307106569|gb|EFN54814.1| hypothetical protein CHLNCDRAFT_24310, partial [Chlorella
variabilis]
Length = 326
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/337 (66%), Positives = 262/337 (77%), Gaps = 12/337 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP++YRWL+++YP VV DV+E+E VI+GV++PVDTS+PNPNGLE+DNLYLDMNGIIH
Sbjct: 1 MGVPSYYRWLSQRYPKVVKDVVEDEVQVINGVEVPVDTSQPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPEDRPAPTT EVF MFDYIDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPAPTTEQEVFTTMFDYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+++A + EEE+LR EF ++G K+ PK +S VFDSNVITPGT FM LS+ALQYYIHL
Sbjct: 121 AAQEAEEREKEEEKLRDEFAKQGIKV-PKKESAVFDSNVITPGTPFMHRLSVALQYYIHL 179
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLN DPGW IKVILSDAN PGEGEHKIM+Y+R QR LPGY PNTRHC+YGLDADLIMLA
Sbjct: 180 RLNADPGWRGIKVILSDANSPGEGEHKIMAYIREQRGLPGYSPNTRHCIYGLDADLIMLA 239
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG-KAKRKAGEFDEKGDEVVVPK 299
LATHE F+ILREV C+ G C G +A R G + G + V K
Sbjct: 240 LATHEPRFAILREV--------GCWQGWGAGRGGVGCWGARAGRDGGAGMQVGG-MWVAK 290
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDF 336
KPYQFL + LREYL+ + R+ + PF D E + DDF
Sbjct: 291 KPYQFLLVGVLREYLERDLRV-HTPFPWDKERVYDDF 326
>gi|412993039|emb|CCO16572.1| 5'-3' exoribonuclease [Bathycoccus prasinos]
Length = 1513
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/693 (37%), Positives = 358/693 (51%), Gaps = 125/693 (18%)
Query: 55 MNGIIHPCFHP--EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
MNG+IH C H D T +E+ +F Y+D ++ MVRP+KLLYMAIDGVAPRAKMN
Sbjct: 1 MNGVIHNCSHGAGTDTNTRMTEEEMMAKVFAYLDHIYRMVRPKKLLYMAIDGVAPRAKMN 60
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQRSRRFR++K+A ++ AE + P++ + FDSN ITPGTEFMA L+
Sbjct: 61 QQRSRRFRSAKEAEEAKAEALAKGE----------PEAQGEPFDSNCITPGTEFMARLTE 110
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L++Y+ + D W +KVILS V GEGEHKIM Y+R +R P YD N HCLYGL
Sbjct: 111 HLKFYVRKKQTEDVAWRNVKVILSGHEVRGEGEHKIMEYIRWERLKPDYDANMSHCLYGL 170
Query: 233 DADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIMLAL THE HF +LREVV F G++ GQP E E+
Sbjct: 171 DADLIMLALVTHEPHFCLLREVVKFGGGER------GQPSR--------------EILER 210
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIP---NPPFEIDLECIVDDFIFMCFFVGNDFL 348
+ + L + LREYLD EF+ F D+E ++DD +F+C VGNDFL
Sbjct: 211 PSD-----DGFLMLQVGLLREYLDLEFQRSVKGACGFAYDVERVIDDIVFLCMLVGNDFL 265
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLT---DGSKPSLRRVEHFIQAVGSYEDRIF 405
P +PTL+I EGA+N L Y+ +LGGY++ G + R+E + + +E +
Sbjct: 266 PPLPTLDIAEGALNTLFDTYRDMLPSLGGYISGDEGGGTFNAPRLEKILTRMAGFERDVL 325
Query: 406 QKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 465
++RA Q E+ QA+R +
Sbjct: 326 EQRAMDVQEFDEK------QAKRNN----------------------------------- 344
Query: 466 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 525
NGK +G P + + A FE + + KEE K + + K
Sbjct: 345 -----KNGK-RNGHPSDSESFTD--------LTAMEQFEAELLKAKEEGKPEPTMMSVAK 390
Query: 526 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEER--EETRKDVVLRYTEGLCWVMH 583
+A + G +K+ YY EK K E+ +E R+ Y EGL WV+
Sbjct: 391 RNAILEGGAD------GLQQYKDMYYREKLELKVGEKAPVDELRQ----AYFEGLNWVLR 440
Query: 584 YYYEGVCSWQWFYPYHYAPFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALP 642
YYY GV SW W+YPYHYAP ASDL L Q + F G PF PF QL+ V P ASSH LP
Sbjct: 441 YYYRGVASWTWYYPYHYAPMASDLCAGLGQLTVKFNYGRPFYPFEQLMAVQPPASSHLLP 500
Query: 643 EHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI-EHTLT 701
E +R MT+ +SP+ F+P + ++D GKR SW+G+ LPF+DE L D + + + LT
Sbjct: 501 ELFRHFMTEESSPLKPFFPDEIKIDFEGKRNSWEGVVLLPFLDEKVLKDAIASVSKEKLT 560
Query: 702 EEEARRNSIMADMLFVLLSHPLSASIYTLDEHC 734
+ + +RN+ P ++ DE+C
Sbjct: 561 DAQNKRNA------------PGECIVFERDENC 581
>gi|156839637|ref|XP_001643507.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156114121|gb|EDO15649.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 1057
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/429 (47%), Positives = 280/429 (65%), Gaps = 20/429 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+E+ P V+DGV++P+D S PN NG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEDAPQVVDGVQLPIDYSAPNQNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P DE+ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPENEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA E + +E E G + + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAKIQDEAREEIMREKEEIGEHIDESVRNKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ +++I+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF G K + N + K E +
Sbjct: 240 GLATHEPHFKILREDVFAQGNNRKRH------NFKDNINMTEEEKQIIMKEDS------Q 287
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LHI LREYL E + PF DLE +DD++FMCFF GNDFLPH+P+L++RE
Sbjct: 288 KPFLWLHISVLREYLSAELWVQRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVREN 347
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K L Y+T + +L VE + +GS E IF+ RH + I
Sbjct: 348 SIDILLDIWKVVLPNLKDYMTCDGELNLASVEKLLYQLGSREGDIFKT------RHIQEI 401
Query: 420 KREKAQARR 428
++++A RR
Sbjct: 402 RKQEALQRR 410
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 138/228 (60%), Gaps = 10/228 (4%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
++ V+L EPG+ RYY KFN +RK VV Y EG+ WV+ YYY+G SW W+
Sbjct: 603 DESVRLYEPGYHSRYYTSKFNIAEENITPLSRK-VVRSYIEGVSWVLLYYYQGCASWNWY 661
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFASD ++ I+FELG PF P+ QL+ V P+AS + LP+ ++ LM +P+S
Sbjct: 662 YPYHYAPFASDFTNIADMEINFELGEPFLPYEQLMSVLPAASGNMLPKVFQSLMRNPDSE 721
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP +F +DMNGK+ SWQGIA LPFIDE RLL V+ LT+ E RN +++
Sbjct: 722 IVDFYPVEFLIDMNGKKMSWQGIALLPFIDEERLLKSVRSQYKVLTDSEKSRNVRNQEIV 781
Query: 716 FVLLSHPLSASIYTLDEHCKQLKIKERVEVK--ERLNPELSDGMNGYI 761
+ S D+ K+L E +E E+ + G++GY+
Sbjct: 782 LI------SNKNVNYDKFVKEL-YTENLENPNFEQYFSHFNSGLSGYV 822
>gi|154413474|ref|XP_001579767.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121913977|gb|EAY18781.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 710
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 271/727 (37%), Positives = 366/727 (50%), Gaps = 146/727 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGL---EYDNLYLDMNG 57
MGVP+F+RWL KYPLVV+ V+E + + VD + NPN + E+DNLY+DMNG
Sbjct: 1 MGVPSFFRWLQRKYPLVVSRVLESD--------VDVDPLESNPNTIGSQEFDNLYIDMNG 52
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
+IH CFHP DR P +EV++ + Y+ R+F +VRPRKLLY+AIDGVAPRAKMNQQRSR
Sbjct: 53 LIHSCFHPADREQPKNIEEVYENIKLYLKRIFNIVRPRKLLYLAIDGVAPRAKMNQQRSR 112
Query: 118 RFRASKDAADSAAE--EERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
RFRA+KD+ + + +E + ++E K+ + Q DSN+ITPGT+FM LS L+
Sbjct: 113 RFRAAKDSEYNRNKNFQELITLGKQKEAEKIMKEQYIQDHDSNIITPGTKFMCDLSQILR 172
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
+I N P W I +ILSDA+VPGEGEHKIM ++R+QR GY+PNTRH +YGLDAD
Sbjct: 173 SFISEMQNTSPAWSNIAIILSDASVPGEGEHKIMEFIRIQRLTDGYNPNTRHVMYGLDAD 232
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LI LALA+HEV+FSILRE +F + DK
Sbjct: 233 LIFLALASHEVYFSILRENIFDKKENDK-------------------------------- 260
Query: 296 VVPKKPYQFL--HIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
P P F+ +I+ LR+YLD E +I + F DLE ++DD +F+CF GNDFLP +P
Sbjct: 261 --PIGPSSFIFANIFVLRQYLDRELQI-DVKFGWDLERVIDDIVFLCFAAGNDFLPQIPG 317
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
EI G ++ L YKK L Y+T+ ++ + F+ E
Sbjct: 318 FEIPRGFVDQLFERYKKLLPQLSSYITNTGDVEMKNLLPFMLGFDYLE------------ 365
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
P+S+ + PS SE V L N
Sbjct: 366 ------------------------PESVHNI---------VSPSERSISVSEYVNNLCND 392
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
T +P +L + F+ + Q N E + K RDK + S
Sbjct: 393 VKTEYKPENDKKLVTA------------KFQKN-QNNLEIYDTK-----RDKKFYYQS-- 432
Query: 534 PEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY-TEGLC-WVMHYYYEGVCS 591
K G +E++ N K + VL+Y T+G+ W Y Y
Sbjct: 433 ------KFG--------FEDEENIKNVVHEYCKGMEWVLKYYTKGVASWSWFYPY----- 473
Query: 592 WQWFYPYHYAPFASD--LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 649
H AP SD L D D N F LGHPF P QL+ V P SS LP+ LM
Sbjct: 474 -------HSAPLVSDFVLLDCDVKN-EFVLGHPFTPLQQLMAVLPPQSSWCLPKMMCDLM 525
Query: 650 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
+SPI DFYP F+VD+ G +W+G +PFID +L ++ + +L EEE +RNS
Sbjct: 526 NSDDSPILDFYPKKFKVDLEGGTTAWKGHVLIPFIDAHKLKKCLRNVNDSLNEEEKQRNS 585
Query: 710 IMADMLF 716
L+
Sbjct: 586 FGVTFLY 592
>gi|449019490|dbj|BAM82892.1| 5'->3' exoribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1363
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 246/573 (42%), Positives = 334/573 (58%), Gaps = 46/573 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV-----------VIDGVKIPVDTSKPNPNGLEYD 49
MG+ +F+RW+ +YP + +EE PV + D + VD S PNPNG E+
Sbjct: 1 MGIASFFRWVVARYPRALQAAVEEAPVTDQAALENGNYLDDNDYLHVDVSLPNPNGEEFS 60
Query: 50 NLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRA 109
NLY D+NG++H C HPEDRP P T +++FQ +F Y+DR+ +VRPR+L+Y+AIDGVAPRA
Sbjct: 61 NLYFDLNGVVHMCTHPEDRPPPATEEDMFQDVFRYMDRIVALVRPRRLIYIAIDGVAPRA 120
Query: 110 KMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 169
K+NQQR+RRFRA+K+A + EEE+LR + +G ++PPK + FDSNVITPGT FM
Sbjct: 121 KINQQRTRRFRAAKEAREKTEEEEKLRALWREQGLRVPPKP-KKPFDSNVITPGTLFMER 179
Query: 170 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 229
L++AL+ YI R+ + P W + VILSDA+VPGEGEHKI ++R QR PGYDP TRH L
Sbjct: 180 LAVALRRYIRERIRSCPAWRSLVVILSDASVPGEGEHKIAEFIRTQRAQPGYDPETRHVL 239
Query: 230 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG-KAKRKAGEF 288
YGLDADLIMLALATHE HF ILRE ++ + DK + + G + K G
Sbjct: 240 YGLDADLIMLALATHEPHFFILRERIYFDSRADKAIQAVKAMNAQQTPAGDRIDHKTGT- 298
Query: 289 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFR-------IPNPPFEIDLECIVDDFIFMCF 341
G + +P++P+ F I LREYL EFR + P +D+E +DDF+F+CF
Sbjct: 299 -SAGPGLPLPERPFDFFRIDRLREYLQAEFRDALQHDAVRQPREPLDVEIALDDFVFLCF 357
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDG-SKPSLRRVEHFIQAVGSY 400
FVGNDFLPH+P+LEIREGAI+ L+ VYK +F+ + G+LTDG RV ++ V
Sbjct: 358 FVGNDFLPHLPSLEIREGAIDFLLEVYKYKFQRI-GHLTDGHGGIHFDRVRELLRDVAHV 416
Query: 401 EDRIFQKRARLH-------QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLA 453
ED +F++RAR +HA + A R V ++ V S A
Sbjct: 417 EDSVFRERARAAGEPPTPVSQHAAVVSGASTAAARTHTVPEVSAKKESVSASTLSIKADA 476
Query: 454 SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP------ 507
P PSP V LD G PH+ R +S A EA+ P
Sbjct: 477 ETP-PSPGVH---VDELDAGVSA---PHRQKRHASEQHQKRAATEADPGLGLVPLPRKHV 529
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
+EN+ K+L +S+A S+ E DK++
Sbjct: 530 KENRATSLRDWKQLEHHRSEAAVSN--EIDKIE 560
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 118/187 (63%), Gaps = 7/187 (3%)
Query: 517 KLKELLRDKSDAFNSDNP-EEDKVKLGEPGWKERYYEEKFNAKTPEERE---ETRKDVVL 572
+ + +LR++ + P EED V+ PGW+ERYY+ KF P + E + + +
Sbjct: 783 QFEHILRERLKQRQTRPPTEEDPVRFHLPGWRERYYQSKFPHWPPLDTEAGAQALQRLCR 842
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD--LDQFNISFELGHPFKPFNQLL 630
Y EGL WV YYY G SW WFYPYHYAP ASDL +DQ +I FE G PF P QL+
Sbjct: 843 AYYEGLLWVYRYYYAGCPSWGWFYPYHYAPLASDLAQCCVDQKDIVFERGAPFTPLEQLM 902
Query: 631 GVFPSAS-SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
V P++S + LP +LM +P+SPI ++YPTDF +D NGKR++WQG+A LPF+DE RL
Sbjct: 903 AVLPASSGAQCLPRILYELMINPHSPIIEYYPTDFAIDYNGKRFAWQGVALLPFVDEQRL 962
Query: 690 LDEVKKI 696
++ +
Sbjct: 963 RLAIQSV 969
>gi|332029616|gb|EGI69505.1| 5'-3' exoribonuclease 1 [Acromyrmex echinatior]
Length = 1679
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 253/716 (35%), Positives = 374/716 (52%), Gaps = 124/716 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP +++V++E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-CLSEVVKEH-------QIP-----------EFDYLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE-VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C HP D +E +F+ +F YI+ LF M+RP+KL +MAIDGVAPRAK+NQQR RRF
Sbjct: 42 TCSHPNDDVCFRISEEMIFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDA QE + + +P + + FDSN ITPGT FMA L L+ ++
Sbjct: 102 RAAKDAE---------VQEAKAIAKGIPIPKEKR-FDSNCITPGTLFMAKLGEQLKCFVE 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+++ D W+K K++ S + VPGEGEHKIM Y+R + Y+ ++ HCLYGLDADLIML
Sbjct: 152 HKVSTDDAWKKCKILFSGSEVPGEGEHKIMDYIRYMKASKEYNSDSSHCLYGLDADLIML 211
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L +HE +FS+LRE V +F ++ ++ +
Sbjct: 212 GLCSHEPNFSLLREEV-------------------------------KFGKQQVKMTPEE 240
Query: 300 KPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ LH+ LREY+++EF I + F D+E I+DD++ M F VGNDF+PH+P L I
Sbjct: 241 TKFCLLHLSLLREYIEHEFSPIKDKLSFSFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIA 300
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
GA+ +L Y + L GY+ + +L R E F++ RL + E
Sbjct: 301 NGALPILYRAYMEVLPTLEGYINEAGTLNLDRFEKFME--------------RLSRLDVE 346
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSP---YQQSECVGRLDNGK 474
+ + A +F S+ P+ S Y+++E DN
Sbjct: 347 QFNEQYADI-------------------KFFESKTGRRPNESERHIYKKTE-----DN-- 380
Query: 475 GTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA--FNSD 532
S P K A I + + +F+ D + E++ + ++ D+SD+ +N +
Sbjct: 381 -ESASPKKTQNKDLDALIKSTREMSLGNFDDD--DIFIEYR-NMDLIVDDESDSEIYNME 436
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
+ K YY K + +E E + Y + W +HYYY G CSW
Sbjct: 437 FVQHKK----------DYYMNKLEYENVDE--EVLRSQAEGYVRAIQWNLHYYYHGCCSW 484
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W+YP+HYAP+ SD+KD + F+LG PF PF QLL V P+ S LP ++ L+T+
Sbjct: 485 SWYYPHHYAPYISDIKDFKDLKLEFDLGQPFLPFQQLLAVLPAFSKDLLPMAFQSLLTEE 544
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
SPI ++YP +F+ D+NGKR W+ + +PFIDE LL ++ LT EE RN
Sbjct: 545 TSPIINYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLAAMQPHLSRLTLEEQARN 600
>gi|68467259|ref|XP_722291.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
gi|46444252|gb|EAL03528.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
Length = 1469
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 266/711 (37%), Positives = 376/711 (52%), Gaps = 103/711 (14%)
Query: 55 MNGIIHPCFHPEDRPAP-TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H C H D + D+++ +F+YI+ LF +++P+K YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDNTITRLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR+RRFR + +A E L++ E G ++P K D FDSN ITPGTEFMA L+
Sbjct: 61 QRARRFRTAYEA------EINLKKAIEN-GEEIP-KEDP--FDSNSITPGTEFMANLTNN 110
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+IH ++ D W I++ILS VPGEGEHKIM Y+R R+ Y+PN RHC+YGLD
Sbjct: 111 LKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIYGLD 170
Query: 234 ADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML L TH+ HF++LR EV F P +RK G D
Sbjct: 171 ADLIMLGLVTHDPHFALLREEVTFGP-----------------------QRKVGPKD--- 204
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFLPH 350
+ + + LH+ LREYL EF+ I N FE D + I+DDFI + + +GNDFLP+
Sbjct: 205 ----LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFILIMYVIGNDFLPN 260
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P L I +GA LL+A +K+ GY+ + K +L R+ +I+ + +E F+K
Sbjct: 261 LPDLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKILSKFEFENFEK--- 317
Query: 411 LHQRHAE---------RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPY 461
H+ E I EK + R G + L + LV + AS P
Sbjct: 318 -HEVDVEWFNKKLDDISISGEKKRQRIG-KLLILKEQKKLVGFIKPWLMEWASQPI---- 371
Query: 462 QQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLK-- 519
+E + GK + +K + I +EA F ++ + ++AKL
Sbjct: 372 --NEILNLDQQGKLPTLHLNKDDVEKNLEFIKEFAIEA--GFLIIHSQSNDTYEAKLDID 427
Query: 520 ---------------ELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKF 555
LR + S N E + L E WK YY+ K
Sbjct: 428 GISPTESEEEHEERITELRKTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQPKL 487
Query: 556 NAKTPEEREETRKDVV---LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LK 608
+ + EE + D++ Y EGL WV++YYY G SW W+Y YHYAP SD L+
Sbjct: 488 HFSI--DTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDISLGLE 545
Query: 609 DL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 666
+L ++ ++ FEL HPFKPF QL+ V P+ S +P YR LM+D SPI +FYP + ++
Sbjct: 546 ELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSPIINFYPHEVDI 605
Query: 667 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DMNGK SW+ + L F+DE +L++ +K IE LT EE +RNS + F+
Sbjct: 606 DMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNSYGHAIKFI 656
>gi|359479538|ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1072
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/349 (58%), Positives = 250/349 (71%), Gaps = 38/349 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWL KYP +V +E+E ++S NPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDER----------ESSSANPNGIEFDNLYLDMNGIIH 50
Query: 61 PCFHPEDRP-APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PCFHPED+ PTTF+EVF M++YIDR+F +VRPRKLLYMAIDGVAPRAKMNQQR RRF
Sbjct: 51 PCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRRF 110
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+ +KD + AEE+RLR++FE EG+ L PK +SQV D N+ITPGT FM +S ALQ YI
Sbjct: 111 QTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVSDPNIITPGTVFMHEVSKALQQYIC 170
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+ ++ GW+ +KVILSD+NVPGEGEHKIMS++RLQR+LP Y+PNT HCLYGLDADLIML
Sbjct: 171 SRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIML 230
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
ALATHEVHFSILRE V T Q+ +CE + K PK
Sbjct: 231 ALATHEVHFSILREDVLTLEQR-------------GSCESAVETKTSP----------PK 267
Query: 300 KPYQ-FLHIWTLREYLDYEFRIPNPP---FEIDLECIVDDFIFMCFFVG 344
FLH+W LREYL+ + +I +PP EI+ E IVDDFIF+CFF+G
Sbjct: 268 ANSSLFLHVWILREYLELDMKISDPPEKLKEINFERIVDDFIFLCFFLG 316
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 181/422 (42%), Positives = 242/422 (57%), Gaps = 37/422 (8%)
Query: 357 REGAINLLMAVYKKEFRALGGYLTD--------GSKPSLRRVEHFIQAVGSYEDRIFQKR 408
R GAI+LLM VYKKEF+ +GGY+ D GS L+RVE FI VG+YE++IF+KR
Sbjct: 405 RMGAIDLLMTVYKKEFKNIGGYMVDMERIEEKKGSFVKLKRVEKFILLVGTYEEKIFKKR 464
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 468
L + E + D+ + D + +R + PS + S V
Sbjct: 465 MALRDSKLRWLLCENS------DIFTNNEEDQSCNLEIGSTNRGCTSPSGKA-RSSSSVE 517
Query: 469 RLDNGKGT----SGRPHKVPRL----SSGATIGAAIVEAE-NSFETDPQENKEEFKAKLK 519
L GT + + L SS ++ +V A +F T +E K +LK
Sbjct: 518 NLGTSSGTEYLITDKSEMFALLFLKHSSARSLDLLLVNATLATFYT------KEMKKRLK 571
Query: 520 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC 579
E +R KSD + S + D+V+LG PGWKERYY+EK + T + E TRK++V +YTEGL
Sbjct: 572 ENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELVQKYTEGLL 631
Query: 580 WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH 639
WV+ YY+ GV SW WFYPYHY PFASD K L + FE G PFKPF+QL+GV P +S+H
Sbjct: 632 WVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVKGKFERGSPFKPFDQLMGVLPPSSAH 691
Query: 640 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT 699
ALP+ Y+ LM D +S I DFY T+FEVD +GKR+ WQGI KLPFIDEARLL E +K+E
Sbjct: 692 ALPKAYQPLMIDEDSNIIDFYNTNFEVDTDGKRFIWQGICKLPFIDEARLLAETRKLEKE 751
Query: 700 LTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNG 759
L ++EA RN+ D LF+ S L YT C+ + +++ S G+NG
Sbjct: 752 LEDQEAVRNARSFDQLFLRFSDKLRL-FYTEQVSCR------KPNKTAKIDSNFSLGING 804
Query: 760 YI 761
YI
Sbjct: 805 YI 806
>gi|410078313|ref|XP_003956738.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
gi|372463322|emb|CCF57603.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
Length = 1039
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/442 (46%), Positives = 281/442 (63%), Gaps = 27/442 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP ++ V+EE P V+DGV +P+D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIICPVLEEYPQVVDGVALPIDYASPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLLMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA + E +E E G + + +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAQIANEAREEELRERENYGEIIDDALKKKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ ++VI+SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF + + + E+ E+++ K
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRTTF------------------SDNMSEEEKELIMKK 281
Query: 300 ---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
KP+ +LHI LREYL E IP F DLE +DD++FMCFF GNDFLPH+P+L++
Sbjct: 282 DAEKPFLWLHISVLREYLAAELWIPRLSFNFDLERAIDDWVFMCFFCGNDFLPHLPSLDV 341
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
RE +I++L+ ++K +L Y+T +L VE ++ +G E IF+ R R
Sbjct: 342 RENSIDILLDIWKVILPSLKTYMTCDGFLNLESVEILLKQLGDREPDIFKTRYIQEVRKQ 401
Query: 417 ERIKREKAQ----ARRGDDVEP 434
E +R + Q +G D P
Sbjct: 402 EAFERRRLQNGKNISKGQDRHP 423
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 141/231 (61%), Gaps = 14/231 (6%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+D VKL E G++ERYY EKF+ + +E E R+D+V Y EG+ WV+ YYY+G SW W+
Sbjct: 604 DDNVKLYESGYRERYYTEKFHI-SKDEIEIVRRDMVRSYVEGVSWVLRYYYQGCASWNWY 662
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YP+HYAPFASD D+ + F+LG PF P+ QL+ V P+AS H LP +R LM++ +SP
Sbjct: 663 YPFHYAPFASDFFDIKDIKVEFDLGEPFLPYEQLMSVLPAASGHTLPPIFRPLMSEADSP 722
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP +F +DMNGK+ SWQGIA LPFIDE RLL+ V+ L++ E RN +L
Sbjct: 723 IIDFYPPEFPIDMNGKKMSWQGIALLPFIDEKRLLEVVRAQYPKLSDAERSRNVRKEAIL 782
Query: 716 FV----LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
+ + S +Y ++ +IK R G++G +S
Sbjct: 783 LISNKNVNYEKFSKKLYQSEDLADDFEIKFR---------HFKSGLSGIVS 824
>gi|403218305|emb|CCK72796.1| hypothetical protein KNAG_0L01770 [Kazachstania naganishii CBS
8797]
Length = 1003
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/443 (46%), Positives = 287/443 (64%), Gaps = 27/443 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE P ++DGV++P+D S N NG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEERPQIVDGVELPIDYSTENANG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y R+ M RPRK+L MA+DGVAPRAKMNQQR+RR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTHRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRLG 119
Query: 121 ASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAVLSIALQYYI 178
+KDA + +EE LR+ E G + ++ +DSN ITPGT FM L++AL+Y+
Sbjct: 120 LAKDAELQNEKKEEELRKR-EHYGEVIDDSVKAKKTWDSNAITPGTPFMDKLALALRYWT 178
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+L DPGW+ ++V++SDA VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI
Sbjct: 179 AFKLATDPGWKNLQVVISDATVPGEGEHKIMNFIRSQRADPEYNPNTSHCIYGLDADLIF 238
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE HF ILRE VF Q+ K K A E+ ++++
Sbjct: 239 LGLATHEPHFKILREDVF--AQEYKS--------------SKRDIDANNMTEEERQILLK 282
Query: 299 K---KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ KP+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L+
Sbjct: 283 RDAEKPFLWLHIGILREYLAAELFVPRLPFAFDLERAIDDWVFMCFFCGNDFLPHLPCLD 342
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
+RE +I++L+ ++KK ++ Y+T + +L VE ++ +G+ E IFQ + QR+
Sbjct: 343 VRENSIDILLDIWKKVLPSMKTYMTCDGQLNLASVEVVLRQLGAREPDIFQTKYIQTQRN 402
Query: 416 AERI----KREKAQARRGDDVEP 434
R KR +G D P
Sbjct: 403 EARYRQNNKRNGKNVSKGQDRHP 425
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+D V+L E G+KERYY KFN + ++ E RKD+V Y EG+ WV+ YYY+G SW W+
Sbjct: 591 DDTVRLHESGYKERYYTGKFNI-SKDQIEPLRKDMVKSYIEGVSWVLLYYYQGCPSWNWY 649
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA+D D++ + F+ G PF P+ QL+ V P+AS H LP +R LM+D +SP
Sbjct: 650 YPYHYAPFAADFFDINDIKVEFKQGEPFLPYEQLMSVLPAASGHTLPPIFRPLMSDVDSP 709
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP +F++DMNGK+ SWQGIA LPFIDE RLL+ V+ L+EEE RN D+L
Sbjct: 710 IIDFYPQEFKIDMNGKKMSWQGIALLPFIDEKRLLETVRAQYPKLSEEERARNCRNEDIL 769
Query: 716 FV 717
+
Sbjct: 770 LI 771
>gi|50310793|ref|XP_455419.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605300|sp|Q6CKX0.3|XRN2_KLULA RecName: Full=5'-3' exoribonuclease 2
gi|49644555|emb|CAG98127.1| KLLA0F07469p [Kluyveromyces lactis]
Length = 992
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/429 (46%), Positives = 284/429 (66%), Gaps = 21/429 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP +++ V+EE PV+ DGV++P+D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEYPVIEDGVQLPLDYSSANPNG-ELDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE++P P T DE+ +F+Y +R+ M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ-VFDSNVITPGTEFMAVLSIALQYYIH 179
+++DA E++ +E E G + S+ +DSN ITPGT FM L+ AL+Y+
Sbjct: 120 SARDAKLQNEAREQVLREREDYGETIDENVKSKKTWDSNAITPGTPFMDKLATALRYWTS 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L DPGW+ +++I+SDA VPGEGEHKIM+++R QR Y+PNT HC+YGLDADLI L
Sbjct: 180 FKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADTQYNPNTTHCIYGLDADLIFL 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF ILRE VF K +P + N + K++ + D +
Sbjct: 240 GLATHEPHFKILREDVFANNNYKK----PKPQDM-INLSEEEKQQLIQQDS--------E 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
KP+ +LHI LREYL E IP+ F+ D E +DD++FMCFF GNDFLPH+P L++RE
Sbjct: 287 KPFLWLHISVLREYLSAELAIPHLSFQFDFERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
+I++L+ ++K YLT +L VE ++ +G E +F+K ++ + +
Sbjct: 347 SIDILVDIWKTVLPKTKTYLTCDGTLNLEPVEALLEQLGDRETDLFKK------KYIQEV 400
Query: 420 KREKAQARR 428
++++A RR
Sbjct: 401 RKQEAHDRR 409
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
++ V+L EPG+ +RYY+ KF+ ++ +KDV+ Y EG+ WV+ YYY+G SW W+
Sbjct: 585 DESVRLYEPGYHDRYYQHKFHVPA-KDIPALQKDVIRCYVEGISWVLLYYYQGCASWTWY 643
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA D K++ +I F+LG PF P+ QL+ V P+AS HALPE +R LM+DPNS
Sbjct: 644 YPYHYAPFAQDFKNIKNLDIHFDLGEPFLPYEQLMSVLPAASGHALPEIFRPLMSDPNSE 703
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP +F VDMNGK+ +WQGIA LPFIDE RLL V++ L++ E RN D L
Sbjct: 704 IIDFYPEEFPVDMNGKKMAWQGIALLPFIDETRLLKTVREQYSKLSDSEKARNVRKKDAL 763
Query: 716 FV 717
+
Sbjct: 764 LI 765
>gi|322801303|gb|EFZ21990.1| hypothetical protein SINV_11797 [Solenopsis invicta]
Length = 1572
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 270/769 (35%), Positives = 387/769 (50%), Gaps = 136/769 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP +++V++E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-CLSEVVKEH-------QIP-----------EFDYLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDEV-FQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C HP D +E+ F+ +F YI+ LF M+RP+KL +MAIDGVAPRAK+NQQR RRF
Sbjct: 42 TCSHPNDDICFRISEEMMFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R++KDA A+ + E R FDSN ITPGT FMA L L+ ++
Sbjct: 102 RSAKDAEIQEAKAIAKGVQIPTEKR----------FDSNCITPGTLFMAKLGDLLKRFVE 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+++ D GW+K K++ S A VPGEGEHKIM Y+R + YD N+RHCLYGLDADLIML
Sbjct: 152 YKISVDEGWKKCKILFSGAEVPGEGEHKIMDYIRYMKASEDYDSNSRHCLYGLDADLIML 211
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L +HE +FS+LRE V +F ++ + +
Sbjct: 212 GLCSHEPNFSLLREEV-------------------------------KFGKQQVKTTPEE 240
Query: 300 KPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ LH+ LR+Y+++EF I + F D+E I+DD++ M F VGNDF+PH+P L I
Sbjct: 241 TKFCLLHLSLLRKYIEHEFSPIKDKLSFPFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIA 300
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
GA+ +L +RA L P+L E +I G+ + F+K E
Sbjct: 301 NGALPIL-------YRAYMEVL-----PTL---EGYINEAGTLQLDRFEK-------FME 338
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
++ R DVE + + + +F ++ P+ S + +L++ S
Sbjct: 339 KLSRL--------DVEQFNEHYADI---KFFEAKTGRRPNES---ERHVYKKLEDSNSVS 384
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
P+ + + A I E+ RD D D + D
Sbjct: 385 ------PKKTQNKDLDALIKST-------------------TEMYRD-MDLMIDDESDSD 418
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
+ K+ YY K + +E E + Y + W +HYYY G CSW W+YP
Sbjct: 419 IYNMEFVQHKKDYYMNKLEYENVDE--EVLRSQAEGYVRAIQWNLHYYYHGCCSWSWYYP 476
Query: 598 YHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
+HYAP+ SD+KD + FELG PF PF QLL V P+ S LP+ ++ L+T+ +SPI
Sbjct: 477 HHYAPYISDIKDFKDLKLEFELGEPFLPFQQLLAVLPAYSKALLPDAFQSLLTEESSPII 536
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+YP +F+ D+NGKR W+ + +PFIDE LL ++ LT EE RN LF
Sbjct: 537 SYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLSAMQPHLSRLTMEEQARNKQGPMCLFS 596
Query: 718 LLSHPLSASIYTL-----DEHCKQLKIKERVEV---KERLNPELSDGMN 758
S T+ H Q+K+ R EV +ERL LS G +
Sbjct: 597 YSEEAGSVHKTTIYFPEFISHA-QVKLMNRDEVFVPRERLIRGLSPGFD 644
>gi|296084855|emb|CBI28264.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/427 (51%), Positives = 276/427 (64%), Gaps = 58/427 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWL KYP +V +E+E ++S NPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDER----------ESSSANPNGIEFDNLYLDMNGIIH 50
Query: 61 PCFHPEDRP-APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PCFHPED+ PTTF+EVF M++YIDR+F +VRPRKLLYMAIDGVAPRAKMNQQR RRF
Sbjct: 51 PCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRRF 110
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+ +KD + AEE+RLR++FE EG+ L PK +SQV D N+ITPGT FM +S ALQ YI
Sbjct: 111 QTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVSDPNIITPGTVFMHEVSKALQQYIC 170
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+ ++ GW+ +KVILSD+NVPGEGEHKIMS++RLQR+LP Y+PNT HCLYGLDADLIML
Sbjct: 171 SRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIML 230
Query: 240 ALATHEVHFSILREVVFTPGQQDKC--FLCGQPGHLAANCEGKAKR----------KAGE 287
ALATHEVHFSILRE V T Q+ C + + AN R K
Sbjct: 231 ALATHEVHFSILREDVLTLEQRGSCESAVETKTSPPKANSSLVKSRGWFKQVLTVDKTNS 290
Query: 288 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP---FEIDLECIVDDFIFMCFFVG 344
F + + K PYQFLH+W LREYL+ + +I +PP EI+ E I + C+ V
Sbjct: 291 FIKNLESKSSIKMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIR---CYECYMVD 347
Query: 345 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 404
M +E ++G+ L+RVE FI VG+YE++I
Sbjct: 348 ------MERIEEKKGSF-----------------------VKLKRVEKFILLVGTYEEKI 378
Query: 405 FQKRARL 411
F+KR L
Sbjct: 379 FKKRMAL 385
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 88/123 (71%)
Query: 512 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 571
+E K +LKE +R KSD + S + D+V+LG PGWKERYY+EK + T + E TRK++V
Sbjct: 400 KEMKKRLKENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELV 459
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
+YTEGL WV+ YY+ GV SW WFYPYHY PFASD K L + FE G PFKPF+QL+G
Sbjct: 460 QKYTEGLLWVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVKGKFERGSPFKPFDQLMG 519
Query: 632 VFP 634
V P
Sbjct: 520 VLP 522
>gi|149239226|ref|XP_001525489.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450982|gb|EDK45238.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1512
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 254/696 (36%), Positives = 367/696 (52%), Gaps = 90/696 (12%)
Query: 55 MNGIIHPCFHPEDRP-APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H C H D + + D+++ +F+YID LF +++P++ YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDGSLSRLSDDQMYAAIFNYIDHLFSIIKPKQTFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR+RRFR + +A EE L++ E G +P K D FDSN ITPGTEFMA L+
Sbjct: 61 QRARRFRTAYEA------EENLKKAIEN-GEDIP-KEDP--FDSNSITPGTEFMAKLTDN 110
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+IH ++ D W +++ILS VPGEGEHKIM Y+R R P YDPN RHC+YGLD
Sbjct: 111 LKYFIHKKITEDSRWANVEIILSGHEVPGEGEHKIMEYIRAVRAQPEYDPNLRHCIYGLD 170
Query: 234 ADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML L +H+ HF++LR EV F P + N G
Sbjct: 171 ADLIMLGLVSHDPHFALLREEVTFGPRR--------------GNSSGPKD---------- 206
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
V ++ + LH+ LREYL+ EF+ FE D E I+DDFI + + +GNDFLPH
Sbjct: 207 ----VTEQKFYLLHLSVLREYLELEFKEIEEQISFEFDFERILDDFILIMYVIGNDFLPH 262
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI------ 404
+P L + +GA LL++ +K+ GY+ + K +L+R+ ++ + +E
Sbjct: 263 LPDLHLNKGAFPLLLSTFKQTLLQSDGYINEDGKINLKRLNIWVHHLSEFEFENFEEKEV 322
Query: 405 ----FQKRARLHQRHAERIKRE-------KAQARRGDDVEPLAQPDSLVPVSRFHGSRLA 453
F K+ E+ +++ K Q + ++P S PVS
Sbjct: 323 DIEWFNKKLDDVSISGEKKRKKIGKMLILKEQKKLVGYIKPWLMEVSSQPVSTLIDWANE 382
Query: 454 SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ----- 508
P ++ + LD K + L +G I + E + + D
Sbjct: 383 DKLPLLPLRKEDVENNLDFLKEFA--------LHAGFLIVHSKSEDNYTAKFDVDGLPSF 434
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNAKT 559
E +++F+ ++ E LR + + N E + L E WK YY+EK +
Sbjct: 435 ETRDDFEERINE-LRRTVKQYQAANLVESESYLNETKEVYQTKFKNWKNDYYKEKLHFSI 493
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK-DLDQF----- 613
+++E+ K + Y EGL WV++YYY G SW ++Y YHYAP SD+ L+
Sbjct: 494 -DDKEDLLK-ITEHYVEGLQWVLYYYYRGCPSWNFYYRYHYAPRISDISLGLEALIEKGE 551
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
++ FE HPFKPF QL+ V P+ S +P YR LM D SPI FYP + +VDMNGK
Sbjct: 552 DLKFEQSHPFKPFEQLMAVLPARSRKLMPAVYRPLMIDEKSPIIQFYPHEVDVDMNGKTA 611
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
+W+ + L F+DE +L+ +K IE LT EE +RNS
Sbjct: 612 TWEAVVLLDFVDEKKLIAALKPIEEKLTPEEKKRNS 647
>gi|294899194|ref|XP_002776531.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239883563|gb|EER08347.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 421
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/398 (50%), Positives = 273/398 (68%), Gaps = 20/398 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDG--------VKIPVDTSKPNPNGLEYDNLY 52
MGVP F+RWL +YP V+ D +E+ + + G +PVD +PNPNG+E+DNLY
Sbjct: 1 MGVPTFFRWLCTRYPKVIKDAVEKVCIEVPGEGGDGANTYDVPVDFEEPNPNGIEFDNLY 60
Query: 53 LDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
LD+NGIIHPC HPED P D +F + Y+DRL +VRPRKLLY+AIDGVAPRAKMN
Sbjct: 61 LDLNGIIHPCCHPEDGMTPENEDVMFLNIMRYVDRLVRIVRPRKLLYVAIDGVAPRAKMN 120
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQR+RRF+A+++A + EEE+LR++ +EGR+ PP +DSNVITPGT F+ ++
Sbjct: 121 QQRARRFKAAQEATEQMKEEEKLRRQMVKEGRE-PPSKKGVPWDSNVITPGTPFLDKVAH 179
Query: 173 ALQYYIHLRLNNDPGWEKI--KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
L +YI R+ NDP W+ + + ILSDA PGEGEHKIM ++R QR + GY+PNT H LY
Sbjct: 180 MLHWYISDRMTNDPLWQLLGFRCILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTHMLY 239
Query: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
G DADLIML LATHE+ F I+REVV P ++ KC+LCG+ GHL + C G ++ +
Sbjct: 240 GADADLIMLGLATHEISFYIIREVVLKP-EERKCYLCGKVGHLPSECTGDDQQPDLGDES 298
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRI----PNP----PFEIDLECIVDDFIFMCFF 342
+ DE ++ KP+Q + + LREYL +F PN PF D+E ++DDF+FMCFF
Sbjct: 299 EEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDFVFMCFF 358
Query: 343 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT 380
VGNDFLPH+P+L IR+G+I+ ++ +Y + L YLT
Sbjct: 359 VGNDFLPHLPSLNIRDGSIDQMICLYVEILPTLTDYLT 396
>gi|397607914|gb|EJK59848.1| hypothetical protein THAOC_19883 [Thalassiosira oceanica]
Length = 773
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 275/794 (34%), Positives = 394/794 (49%), Gaps = 150/794 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P +RWL ++YP ++ ++ TS P+ DN YLDMNGIIH
Sbjct: 60 MGIPKMFRWLTDQYPNIL------------NRRLGSATSIPH-----VDNFYLDMNGIIH 102
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H + T DE +F+ +F Y+DRL+ +V+PRK+LY+A+DGVAPRAKMNQQRSRR
Sbjct: 103 PCTHGNNEDEITILDETEMFKKIFGYVDRLYKIVQPRKVLYLAVDGVAPRAKMNQQRSRR 162
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR+SK+A AA R+G LP + FDSN ITPGT+FM L +A++ +I
Sbjct: 163 FRSSKEAEKLAA------TILARDG-SLPER---DAFDSNCITPGTDFMLKLGLAMRKWI 212
Query: 179 HLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNL---------PGYDPNTRHC 228
+ DP W+ V++S +VPGEGEHK+M ++R + L P + P+ H
Sbjct: 213 EYKQQTDPAWKNGCDVVVSGPDVPGEGEHKVMDFIRDTKALYDPDDLEKSPHWQPSLTHV 272
Query: 229 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 288
LYGLDADLIML LATHE HF +LRE + + G+ G+ K +
Sbjct: 273 LYGLDADLIMLGLATHEPHFLLLREKM-------SVVMAGR---------GRHKHR---- 312
Query: 289 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVG 344
+K D + + + L + +LRE +FR + D+ ++DDFIFMC FVG
Sbjct: 313 -KKKDMLEYTRNDFDLLELSSLREMFKIQFRKFADSDRLKVQYDVCRVIDDFIFMCMFVG 371
Query: 345 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 404
NDFLPH+P LEI GA++L++ Y GGYLTD K R+E F + +E+
Sbjct: 372 NDFLPHVPHLEIDNGALSLMLNNYIDLLPEWGGYLTDKGKIHPARLEQFFYNLAVFEEEH 431
Query: 405 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 464
F++RA + E Q DD + F+G P+P +++
Sbjct: 432 FRRRAYEENEPGWGLGTENEQ----DDED-------------FYGEWYGGTPTPLVAKEA 474
Query: 465 ECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRD 524
G +++ G E+E+ ET + + K + K
Sbjct: 475 N--------DGLVVETNRIDIDGGG--------ESESQAETTAPDTAPKTKVEKKFKKLH 518
Query: 525 KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFN----AKTPEEREETRKDVVLRYTEGLCW 580
DA S ++E YYE K E + R+ + Y EGL W
Sbjct: 519 PRDASRS--------------YREFYYESKLGISPLVTNRAEAQRDRRAIARDYLEGLHW 564
Query: 581 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF----NIS---------FELGH--PFKP 625
++YY+ G CSW WF+P+ YAP ++D+ +L +F +IS F+ G+ PF P
Sbjct: 565 NLNYYHSGCCSWSWFFPHLYAPLSTDMVNLSEFYGDEDISPTDNDGFREFKFGNTEPFPP 624
Query: 626 FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
QLL V P S+ LP +LMT+P+SP++ FYP DF+ D NGKR W+ I K+PFID
Sbjct: 625 LAQLLSVLPPQSASLLPPSLGELMTEPSSPLAPFYPNDFDSDPNGKRQPWEAIVKIPFID 684
Query: 686 EARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEV 745
+LLD V I + AD PL+ + T E + +K + V
Sbjct: 685 GDQLLDVVNGI-------------LEAD------EKPLTGELLTNAERRRNMKGQSHTFV 725
Query: 746 KERLNPELSDGMNG 759
ER + EL +NG
Sbjct: 726 PER-DQELVGAVNG 738
>gi|403224058|dbj|BAM42188.1| exoribonuclease [Theileria orientalis strain Shintoku]
Length = 1230
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/628 (37%), Positives = 348/628 (55%), Gaps = 81/628 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEE----EPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVP FYRWL +YP V D+++ + D ++ +D PNPNG E+DNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDLVDNYNDRNLDLSDEDQVGLDLLSPNPNG-EFDNLYLDMN 59
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
GIIHPC HPE+ P + + +F+C+ +YIDR+F +VRPRKL+Y+AIDGVAPRAK+NQQRS
Sbjct: 60 GIIHPCCHPENMEQPESEEIMFKCIVEYIDRIFYLVRPRKLIYLAIDGVAPRAKINQQRS 119
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRF+++ A E++ +E+ + + +DSNVITPGTEFM LS +
Sbjct: 120 RRFKSAALADLEDETYEKMLKEYLEKKNDMEIPVRKNKWDSNVITPGTEFMYKLSNKIVE 179
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
YI R+ W +I VI SD+NVPGEGEHKIM ++R QR+ P YDPNT+H L+G+DADL
Sbjct: 180 YIKERVEKYDAWRRIVVIFSDSNVPGEGEHKIMEFIRSQRHCPDYDPNTKHVLHGMDADL 239
Query: 237 IMLALATHEVHFSILREVV---FTPGQQ--DKCFLCGQP---GHLAANCEGKAKRKAGEF 288
IML L THE +F ILRE+V P + K F +P LA + +K
Sbjct: 240 IMLGLTTHEPNFYILREIVTFYVHPSNKIAPKEFELEEPEGRSALAPKADNMSK------ 293
Query: 289 DEKGDEVVVPK-KPYQFLHIWTLREYLDYEFRIP---NPPFEIDLECIVDDFIFMCFFVG 344
+EK +++ KP Q L + LREYL ++ R + ID E VDD + M FF G
Sbjct: 294 EEKYMKMMRENWKPLQLLQLAVLREYLSHQLRFVTGFDNGSSIDFERCVDDLVLMIFFCG 353
Query: 345 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 404
NDFLP++P++ I G+I+ ++ +Y+K +L YL++ + + F + E+
Sbjct: 354 NDFLPNLPSISITGGSIDQMILLYQKLLPSLNDYLSNEGNLNFHSISTFFHYLSKIENET 413
Query: 405 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQS 464
F K+ +++ +E + ++Q
Sbjct: 414 F-KQIYEYKKKSEEYHKNRSQV-------------------------------------- 434
Query: 465 ECVGRLDNGKGTSGRP-HKVPRLSSGATIGAAIVEAEN-SFETDPQEN-KEEFKAKLKEL 521
N +GT+ RP ++V +++ G G + EN S D +E+ + ++ +L +L
Sbjct: 435 -------NPRGTTHRPENEVTKVTDGGKEG--VFGGENGSVNKDAEEDFMKRYEEELNKL 485
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPG-WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCW 580
+ D V L +P WKE YY EKF+ ++ +E ++V Y +G+CW
Sbjct: 486 KSVDEVKLSVD------VTLNDPRLWKEAYYREKFHLTEEDDMKEFVQEVSFHYIKGICW 539
Query: 581 VMHYYYEGVCSWQWFYPYHYAPFASDLK 608
V+ YYY+G SW W+YPYHY+PF SDL+
Sbjct: 540 VLRYYYQGCPSWSWYYPYHYSPFCSDLE 567
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 69/103 (66%)
Query: 615 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
I F+ G P PF QL+GV P SSH +PE R LMTDP SP+ DFYP F+ D NGKRY
Sbjct: 728 IKFDYGTPLTPFQQLMGVMPIRSSHCIPESLRGLMTDPESPLRDFYPVKFQEDPNGKRYK 787
Query: 675 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+Q +A LPFIDE +LL VK IE L EEE RN + +++F+
Sbjct: 788 YQWVALLPFIDEEKLLHYVKPIEEKLNEEEKYRNRVSKNIIFL 830
>gi|66826105|ref|XP_646407.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60474374|gb|EAL72311.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1190
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/434 (47%), Positives = 287/434 (66%), Gaps = 31/434 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+PAF+RWL +KY ++ + E P DG + VD + PNPNG EYDNLYLDMNGIIH
Sbjct: 1 MGIPAFFRWLIDKYGGLIQETTE--PREADGGRSVVDFTTPNPNG-EYDNLYLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P + +++ Q +++Y+D LF ++RPRKL+YMA+DGVAPRAKMNQQR+RRFR
Sbjct: 58 PCAHPEKGPKPKSIEDMIQSIYEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRFR 117
Query: 121 ASKDA-----ADSAAEEERL------RQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAV 169
A+ D+ ++A ER+ +QE+E+ + K + FDSN ITPGT FM
Sbjct: 118 AALDSRLDKDKEAALWRERIYDGLATQQEYEQ---YMEEKKNKFKFDSNCITPGTLFMDR 174
Query: 170 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 229
++ +L+ Y+ +L DP W+ +K+I+SDA+VPGEGEHKIM YVR QR P YDPN +H +
Sbjct: 175 VAESLRTYVAEKLTTDPAWKDVKIIISDASVPGEGEHKIMDYVRHQRAQPDYDPNLKHII 234
Query: 230 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 289
YGLDADLIML LATHEV+F ILRE + P + C C + GHLA C+ E D
Sbjct: 235 YGLDADLIMLGLATHEVNFDILREFI-QPIARGVCHKCHKKGHLAIECK-------EEVD 286
Query: 290 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLP 349
+ + +V K YQ LH+ L+EYL+ E ++ + PF D++ IVDDFIF+CFFVGNDFLP
Sbjct: 287 DSVKDFLV--KNYQILHLHLLKEYLELETKV-STPFGFDIDRIVDDFIFLCFFVGNDFLP 343
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P LEI++GAI+ ++ YK+ + YL + + R+ A+ E+ FQ++
Sbjct: 344 HLPNLEIKDGAIDRVIKCYKELLPSFDDYLVSNGEVNFPRLSQIFVALTKGEEESFQRKI 403
Query: 410 RLHQRHAERIKREK 423
Q+ A+ +K+ +
Sbjct: 404 ---QKDAQILKKRQ 414
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 113/187 (60%), Gaps = 13/187 (6%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+K E GW++RYY+ F E E+ K + Y EGL WV+ YY++G SW W+YPY
Sbjct: 607 IKYSEEGWRDRYYQSCFQV----ENEDDIKQICKSYVEGLVWVLKYYFKGCSSWGWYYPY 662
Query: 599 HYAPFASDL-KDLDQFNI-SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM-----TD 651
HY+P+ +D+ K DQF +E+G PFKPFNQL+ V P AS +P+ Y+KLM +
Sbjct: 663 HYSPYITDISKFFDQFEYPQYEMGEPFKPFNQLMSVLPPASCQFVPKPYQKLMGISVDGE 722
Query: 652 P--NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
P SPI +FYP F +D ++G+ LPFI+ +LL + K E LTEEE RN+
Sbjct: 723 PVEESPIIEFYPRAFRIDRGPTEPLYKGVCLLPFINSIKLLKTISKTEPLLTEEEVDRNT 782
Query: 710 IMADMLF 716
+ D++F
Sbjct: 783 LGHDLMF 789
>gi|146423491|ref|XP_001487673.1| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 262/724 (36%), Positives = 378/724 (52%), Gaps = 132/724 (18%)
Query: 55 MNGIIHPCFHP-EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H C H +D + T D+++ +F YI+ LF +++P+ + YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDDTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR+RRFR + +A EE L++ +G ++P K D FDSN ITPGTEFMA L+
Sbjct: 61 QRARRFRTAYEA------EENLKKAI-LQGLEIP-KDDP--FDSNAITPGTEFMAKLTEN 110
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+IH +++ D W + +ILS VPGEGEHKIM+Y+R ++ P Y+ N+RHC+YGLD
Sbjct: 111 LKYFIHKKISTDSRWAETVIILSGHEVPGEGEHKIMNYIRTMKSQPNYNSNSRHCIYGLD 170
Query: 234 ADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML L +H+ HF +LRE V F P ++ K+ + ++
Sbjct: 171 ADLIMLGLVSHDPHFCLLREEVTFGP---------------------RSGNKSNDLHDQ- 208
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
+ LHI LREY+ EF+ + FE D E ++DD I + + +GNDFLP
Sbjct: 209 --------KFFLLHISLLREYISLEFQDMDNDVSFEFDFERVLDDLILIMYVIGNDFLPS 260
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+P L I +GA LL+ + K +L + +I G+ I KR
Sbjct: 261 LPDLYINKGAFPLLLETF---------------KQALAESDGYINENGT----INLKRLA 301
Query: 411 LHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLAS-GPSPSPYQQSECVGR 469
+ RH + E + + DV+ Q L +S G R G Q + VG
Sbjct: 302 IWLRHLSEFELENFE-KLNVDVDWFNQ--RLEDISITGGKRRERMGKLLILKDQKKLVGM 358
Query: 470 LD-----------------NGKGTSGRPHKVPRLSSGAT---------------IGAAIV 497
+ G+G K+P LS A +G IV
Sbjct: 359 IKPWLMEYSTMKVADLVQLEGEG------KLPLLSLPAEEVSKHLDFIKQFALEVGLIIV 412
Query: 498 --EAENSFET-------DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---- 544
+++++E P E EE + ++ E+ R + S N E + L E
Sbjct: 413 HSRSKDTYEAKLDIDGMSPYETDEEHEDRINEI-RKSVKKYQSANLFETEDLLKESRDIY 471
Query: 545 -----GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
WK++YY+EKF ++ E ++ Y EGL WV++YYY+G SW W+Y YH
Sbjct: 472 DAKFMKWKDQYYQEKFKFSIHDKEEMV--NLTEHYIEGLQWVLYYYYQGCPSWSWYYRYH 529
Query: 600 YAPFASD----LKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
YAP SD L+++ + N I+FELG PFKPF QL+ V P+ S +P YR LMT+ +
Sbjct: 530 YAPRISDISIGLENMLENNKKITFELGTPFKPFEQLMAVLPARSRKLMPLEYRPLMTESH 589
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI DFYP ++DMNGK SW+ + L F+DE RL++ +K IE LT EE +RNS D
Sbjct: 590 SPIIDFYPDKVDIDMNGKTASWEAVVLLSFVDEKRLIETLKPIEAKLTPEETKRNSFGTD 649
Query: 714 MLFV 717
+ F+
Sbjct: 650 IEFI 653
>gi|147771605|emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera]
Length = 321
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/310 (65%), Positives = 238/310 (76%), Gaps = 30/310 (9%)
Query: 75 DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEER 134
++VF+ +FDYID LF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRA+KDAA++ AEEER
Sbjct: 30 NDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEER 89
Query: 135 LRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVI 194
LR+EFE EG+ L PK + DSNVITPGT+FMAVLS+ALQYYIH RLN +PGW KVI
Sbjct: 90 LRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHSRLNRNPGWCSTKVI 149
Query: 195 LSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREV 254
LSD+NVPGEGEHKIMSY+R QRNL G++PNTRHCLYGL +
Sbjct: 150 LSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGL---------------------M 188
Query: 255 VFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYL 314
+ PGQQ+KC+LCGQ GHLAA C G E D+ + KK YQFL+IW LREYL
Sbjct: 189 ITPPGQQEKCYLCGQVGHLAAECRGI---------EVVDDTPIHKKKYQFLNIWVLREYL 239
Query: 315 DYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRA 374
Y+ I NPPFEI+ E ++DDF+F+CFFVGNDFLPHMPTLEIREGAINLLM VY++EF A
Sbjct: 240 QYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRREFSA 299
Query: 375 LGGYLTDGSK 384
+GGYLTD +
Sbjct: 300 MGGYLTDAGE 309
>gi|449531061|ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/254 (76%), Positives = 221/254 (87%), Gaps = 1/254 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVV-IDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGVPAFYRWLA++YP +ADV+EEEPV GV P+D SKPNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCFHPE +P P T+D VF+ +FDYID LF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDAA++ AEEERLR+EFE EG+ L PK + DSNVITPGTEFM VLS+ALQYY
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RLN++PGW KVILSD+NVPGEGEHKIM Y+RLQRNLPG+DPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 240 ALATHEVHFSILRE 253
+LATHEVHFSILRE
Sbjct: 241 SLATHEVHFSILRE 254
>gi|147866227|emb|CAN79939.1| hypothetical protein VITISV_027778 [Vitis vinifera]
Length = 918
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/397 (52%), Positives = 256/397 (64%), Gaps = 63/397 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+FYRWL KYP +V +E+E ++S NPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDER----------ESSSANPNGIEFDNLYLDMNGIIH 50
Query: 61 PCFHPEDRP-APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PCFHPED+ PTTF+EVF M++YIDR+F +
Sbjct: 51 PCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSI---------------------------- 82
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
AEE+RLR+++E E + L PK +SQV D N+ITPGT FM +S ALQ YI
Sbjct: 83 ---------EAEEQRLRRQYEMEXKPLVPKQESQVSDPNIITPGTVFMHEVSKALQQYIC 133
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R+ ++ GW+ +KVILSD+NVPGEGEHKIMS+ RLQR+LP Y+PNT HCLYGLDADLIML
Sbjct: 134 SRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFXRLQRSLPDYNPNTLHCLYGLDADLIML 193
Query: 240 ALATHEVHFSILREVVFTPGQQDKC--FLCGQPGHLAANCEGKAKR----------KAGE 287
ALATHEVHFSILRE V T Q+ C + + AN R K
Sbjct: 194 ALATHEVHFSILREDVLTLEQRGSCESAVETKTSPPKANSSLVKSRGWFKQVLTVDKTNS 253
Query: 288 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP---FEIDLECIVDDFIFMCFFVG 344
F + + K PYQFLH+W LREYL+ + +I +PP EI+ E IVDDFIF+CFF+G
Sbjct: 254 FIKNLESKSSIKMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIVDDFIFLCFFLG 313
Query: 345 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD 381
NDFLPHMPTLEI EGAI+LLM VYKKEF+ +GGY+ D
Sbjct: 314 NDFLPHMPTLEIHEGAIDLLMTVYKKEFKNIGGYMVD 350
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 166/250 (66%), Gaps = 7/250 (2%)
Query: 512 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVV 571
+E K +LKE +R KSD + S + D+V+LG PGWKERYY+EK + T + E TRK++V
Sbjct: 410 KEMKKRLKENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELV 469
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
+YTEGL WV+ YY+ GV SW WFYPYHY PFASD K L + E G PFKPF+QL+G
Sbjct: 470 QKYTEGLLWVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVKAKXEKGSPFKPFDQLMG 529
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P +S+HALP+ Y+ LM D +S I DFY T+FEVD +GKR+ WQGI KLPFIDEARLL
Sbjct: 530 VLPPSSAHALPKAYQPLMIDEDSNIIDFYNTNFEVDTDGKRFIWQGICKLPFIDEARLLA 589
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNP 751
E +K+E L E+EA RN+ D LF+ S L S Y C+ + +++
Sbjct: 590 ETRKLEKELEEQEAVRNARSFDHLFLRFSDKLR-SFYXEQVSCR------KPNKTAKIDS 642
Query: 752 ELSDGMNGYI 761
S G+NGYI
Sbjct: 643 NFSLGINGYI 652
>gi|427780147|gb|JAA55525.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1163
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/635 (36%), Positives = 332/635 (52%), Gaps = 111/635 (17%)
Query: 91 MVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS 150
M++P+K +MA+DGVAPRAKMNQQR RRF+++K+A A+E+ R G LP +
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQQRGRRFKSAKEAQ---AQEKEARDR----GEVLPTE- 52
Query: 151 DSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMS 210
+ FDSN I+PGTEFMA L LQ ++ +++ DP W +KV LS PGEGEHK+M
Sbjct: 53 --ERFDSNCISPGTEFMARLQDQLQQFVATKVSTDPLWRGVKVYLSGHQTPGEGEHKVMD 110
Query: 211 YVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQP 270
++R +R+ PGYDPNTRHCLYGLDADLIML + +HE HF++LRE + +Q++
Sbjct: 111 FIRTERSQPGYDPNTRHCLYGLDADLIMLGMCSHEPHFALLREEIVYGKRQNQ------- 163
Query: 271 GHLAANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEI 327
KR + VP++ + LH+ LREYL+ EF+ PFE
Sbjct: 164 -----------KR-----------LNVPEEITFHLLHLSLLREYLELEFQELKKTIPFEF 201
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 387
++ I+DD++ MCF VGNDFLPH+P L I A+ +L Y +LGGY+ + K +L
Sbjct: 202 KMDNIIDDWVLMCFLVGNDFLPHLPNLHIAHNALPVLYQAYIDVMPSLGGYINEYGKLNL 261
Query: 388 RRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRF 447
R E F+ RL Q E+ +A +F
Sbjct: 262 ERFEKFL--------------TRLSQFDYEKFTDVQAD-------------------QKF 288
Query: 448 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP 507
S+ A +P+ Q NG SG+ DP
Sbjct: 289 LASKRAYAEAPNGIVQQ-------NGSPPSGKEKT----------------------KDP 319
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 567
E + K L D D F+SD +E +++ K YY K + + +E
Sbjct: 320 DEKR--LLEKFSHL--DIPD-FDSDEDQEGLLEMEFRQHKRDYYVNKL--EYADVNKEVM 372
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
++ Y + W +HYYY GV SW W+YP+HY+P+ SD+KD +++FELG PF PF
Sbjct: 373 QEQAHGYVRAIQWNLHYYYNGVQSWNWYYPHHYSPYISDIKDFQNLDMTFELGKPFLPFQ 432
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+ + PSAS +P Y+ LM + SPI D+YP DF D+NGK++ W+ + +PFI+E
Sbjct: 433 QLMAILPSASKKLVPSAYQDLMENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEG 492
Query: 688 RLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHP 722
RLL +++ LTEEE RN +LFV P
Sbjct: 493 RLLPAMEERFEKLTEEEKSRNGHSGHLLFVYSKEP 527
>gi|408388369|gb|EKJ68055.1| hypothetical protein FPSE_11866 [Fusarium pseudograminearum CS3096]
Length = 1391
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/746 (34%), Positives = 376/746 (50%), Gaps = 110/746 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHP---EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H ED + +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E+ R + EG ++P + + FDSN ITPGTEFMA LS L+Y+
Sbjct: 102 RFRTALDA-------EKARDKAISEGVEIPKE---EPFDSNCITPGTEFMAKLSQQLRYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLYGLDADLI
Sbjct: 152 VNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+ +K K+ E + +
Sbjct: 212 MLGLLSHDPHFCLLREEV-TFGR-------------------ASKSKSKELEHQN----- 246
Query: 298 PKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P+
Sbjct: 247 ----FYLLHLCIVREYLEMEFQELGEEGTLSFPFDLERVIDDFILMAFFVGNDFLPNLPS 302
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA+ + +YK GY+ + ++ R++ + + + E F+ +
Sbjct: 303 LHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGELSNTEIDAFENDVSDEK 362
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
+A + ++ + + + P + LV S R PY LD G
Sbjct: 363 WYASKQMEKRLENKHAETKPP--KGGQLVLTS---AQRDLWKQKIRPYISKRSDDPLDLG 417
Query: 474 KGTSGRPHK-VPRLSSGATIGAAIVEAENS-----FETDPQENKEEFKAKLK-------- 519
K V L+ + + E + P+ N ++ +
Sbjct: 418 TSLKADDRKFVQDLADSMHLQWSTKEDDEGHRHLIVSFPPKNNDDDDDEDDEEEEGNLAA 477
Query: 520 -ELLRDKSDAFNSDNPEEDKVKLGEPGWKERY-------YEEKFNAKTPEEREETRKDVV 571
+++ A D ED K + ++++Y Y +KF P+ ++ +
Sbjct: 478 YRVMKTYDKALVIDLTAEDAQKQYDQLYQDKYQGWKTKYYLQKFEEWAPDSYDKELTALC 537
Query: 572 LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
Y +GL WV++YYY V +DL +F+ G PF P+ QL+G
Sbjct: 538 ENYVQGLQWVLYYYYRDVVK----------GVGADL--------NFKKGQPFLPYEQLMG 579
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
V P S +P+ Y LMT+P+SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLLD
Sbjct: 580 VLPDRSKKIVPKVYHDLMTNPDSPIVDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLD 639
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFV 717
++ L +E RN + F
Sbjct: 640 AMRPKNELLEPDEKARNGFGVPLKFT 665
>gi|358392275|gb|EHK41679.1| hypothetical protein TRIATDRAFT_228664 [Trichoderma atroviride IMI
206040]
Length = 1391
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 264/744 (35%), Positives = 376/744 (50%), Gaps = 127/744 (17%)
Query: 3 VPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPC 62
VP F+RWL+E+YP ++ VI E +IP E+D LYLDMNGIIH C
Sbjct: 9 VPKFFRWLSERYP-AISQVIAEN-------RIP-----------EFDCLYLDMNGIIHNC 49
Query: 63 FHPEDRPAPTTF----DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
H +D TTF +E+F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 50 TH-KDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 108
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + D E+ R + REG +LP + + FDSN ITPGTEFMA LS L+Y++
Sbjct: 109 FRTALDV-------EKARDKAIREGVELPKE---EPFDSNCITPGTEFMAKLSQQLRYFV 158
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ V+LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLIM
Sbjct: 159 NKKISEDTDWQGCDVVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNVRHCLYGLDADLIM 218
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+ +K K+ E + +
Sbjct: 219 LGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEHQN------ 252
Query: 299 KKPYQFLHIWTLREYLDYEFR-IPNP---PFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ LH+ +REYL+ EF+ + N F+ DLE ++DDFI M FFVGNDFLP++P L
Sbjct: 253 ---FYLLHLCIVREYLEMEFQELQNKGALKFQFDLERVIDDFILMAFFVGNDFLPNLPGL 309
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
I EGA+ + +YK GY+ + L R++ + + E F+ Q
Sbjct: 310 HINEGALANMFRIYKSVLPQCEGYINENGVIHLDRLQRLLDELSKTELDNFEYEVSDQQW 369
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGK 474
A + K + + G +P ++ ++ + ++ F R P+ + LD G
Sbjct: 370 FASKQMENKLEQKNG--AKPRSKKNNQLIMTSFQ--RDLWKQKIRPFISNRSQQPLDLGS 425
Query: 475 GTSGRPHKVPR-LSSGATIGAAIVEAENSF-----------ETDPQENKEEFKAKLK--E 520
K + L+ + + E E ET E+ +E + L
Sbjct: 426 DLKAADRKFAQDLAESMHLQWSTKEDEEGNRRLVIAFPPKKETSDGEDDDEEEGNLAAYR 485
Query: 521 LLRDKSDAFNSDNPEEDKVKLGE-------PGWKERYYEEKFNAKTPEEREETRKDVVLR 573
+++ A +D ED K E GWK +YY +KF ++ EE +K +
Sbjct: 486 VMKSYDKATIADVSPEDAQKQYEELYQQKYQGWKTKYYLQKFEEWPQDKYEEEQKRLCEN 545
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y G +++F+LG PFKP QL+GV
Sbjct: 546 YGLGA-----------------------------------DLNFKLGQPFKPNEQLMGVL 570
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S +P Y LMT+ NSPI DFYP DFE+DMNGK+ W+ + K+PFIDEARLL +
Sbjct: 571 PDRSKKIVPAVYHDLMTNANSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEARLLAAM 630
Query: 694 KKIEHTLTEEEARRNSIMADMLFV 717
L++++ RN + F
Sbjct: 631 APQNELLSDDQKARNGFGVPLKFT 654
>gi|325185573|emb|CCA20056.1| 5'3' exoribonuclease 1 putative [Albugo laibachii Nc14]
Length = 1515
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 266/755 (35%), Positives = 387/755 (51%), Gaps = 147/755 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P FY +++E+YPL+ I G+ + E+D YLDMNGI+H
Sbjct: 1 MGIPRFYAYISERYPLINQ--------TISGLSLLP----------EFDCFYLDMNGILH 42
Query: 61 PCFH---PEDRPAPTTFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
C H D +P TF+E FQ + Y+DRL +V+PRKL+Y+AIDGVAPRAK+NQQRS
Sbjct: 43 VCTHNNNSSDDASPATFEEQFQAIVRYLDRLVTCIVKPRKLVYLAIDGVAPRAKLNQQRS 102
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRF A + E L E E+ G + +FDS+ ITPGTEF+ +S L Y
Sbjct: 103 RRFSAGLVRQEKVKE---LALEMEKNGTT----CEKDLFDSSCITPGTEFLERISEQLVY 155
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I ++ NDP W +++V S + VPGEGEHKIM ++R ++ YD N RHC+YG DADL
Sbjct: 156 FIRHKIKNDPLWSRLEVYFSGSEVPGEGEHKIMDFIRQRKMSARYDANVRHCMYGSDADL 215
Query: 237 IMLALATHEVHFSILREVV--FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
++L+L HE HF+++RE V + G + K L G +++K + D+
Sbjct: 216 MLLSLMAHEPHFTLIREHVDWGSGGFKSKGKLSG------------SEKKKIQEDQ---- 259
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNP-------PFEIDLECIVDDFIFMCFFVGNDF 347
+Q +H+ REYL E R+ P +D E ++DDFIF+ F GNDF
Sbjct: 260 -------WQLVHLSLFREYLMMEMRVKYPLGGQVQIDERLDGERMIDDFIFLTFLFGNDF 312
Query: 348 LPHMPTLEIREGAINLLMAVYKK---EFRALGGYLTDGSK-PSLRRVEHFIQAVGSYEDR 403
+PH PTLEIRE AI +L+ VY++ E +++ YLTD K ++ ++ +GS E+
Sbjct: 313 IPHSPTLEIRENAIPILLKVYRELLDEQKSV-QYLTDSGKLVNVELLQALFLKIGSMEEE 371
Query: 404 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 463
I KRA + ER KR + R D P A PD +
Sbjct: 372 ILSKRAEV-----ERKKRNRKHYR--SDKRP-AIPDEI---------------------D 402
Query: 464 SECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ-ENKEEFKAKLKELL 522
++C+ +L P + AA +E + + + + ++++E++ + ELL
Sbjct: 403 TKCMPQL-------------PVVDELDEDEAAEIEFALALDQEAEFDSQDEYEDDVSELL 449
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPE------EREETRKDVVLRYTE 576
D K YYE KF + + + +E RK + E
Sbjct: 450 TLSGTESFQDT-------------KWTYYERKFGLQRGDGDAGNSDLQEIRK----HFLE 492
Query: 577 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF--NISF----ELGH---PFKPFN 627
L W + YY++G SW W+YP+HY+P SDL + I+F E G P PF
Sbjct: 493 ALVWCLAYYFQGPPSWSWYYPHHYSPMISDLTGIADILKEITFPSVSETGAVDGPLLPFE 552
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QLL PS+S+H LP+ ++ LM P SPI FYP F+VDM GKR W+G+ LPFID
Sbjct: 553 QLLANLPSSSAHLLPKPFQFLMQSPLSPIKHFYPATFQVDMEGKRNDWEGVTVLPFIDIE 612
Query: 688 RLLDEVKKIEHT----LTEEEARRNSIMADMLFVL 718
+L + +EH LTE E +RN + L ++
Sbjct: 613 QLRAAI--LEHCPMDQLTEAECKRNRLQLHALKIV 645
>gi|296423651|ref|XP_002841367.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637604|emb|CAZ85558.1| unnamed protein product [Tuber melanosporum]
Length = 883
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/434 (47%), Positives = 269/434 (61%), Gaps = 53/434 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPA +RWL KYP +V+ VIEE+P IDGV VDT++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLTNKYPKIVSPVIEEQPQEIDGVVRAVDTTQPNPNG-ESDNLYLDMNGIVH 59
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+ P T + + +F Y +R+ MVRP KLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPEEGEPPATEEAMMLAVFAYTERVVNMVRPNKLLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
++++A + E +L ++ E+ G K + +++DSN ITPGT FM +L+ +L+Y+I
Sbjct: 120 SAQEAKEKEDETAQLIEQMEKHGSKFDDVIKNKKIWDSNAITPGTPFMDILAASLKYWIA 179
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+LN+DP W K+K+I+SD+ VPGEGEHKIM ++R QR P YDPNTRH +YGLDADLIML
Sbjct: 180 KKLNDDPAWAKLKIIISDSTVPGEGEHKIMEFIRSQRLSPEYDPNTRHVIYGLDADLIML 239
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L THE HF +LRE VF E +AK
Sbjct: 240 GLGTHEPHFKVLREDVFAK-------------------EARAK----------------- 263
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
T R Y P PF +LE +DD+IFMCFFVGNDFLPH+P+LEIRE
Sbjct: 264 ---------TCRIY----NASPLKPF-FELERALDDWIFMCFFVGNDFLPHLPSLEIREN 309
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERI 419
I+ L+AV+K +GGY+T L+RV++ + + ED+IF+ R R A I
Sbjct: 310 GIDTLIAVWKDNIPLMGGYVTKDGTVDLKRVQYILDGLAKQEDQIFRNRKRTISTTAPAI 369
Query: 420 K-REKAQARRGDDV 432
+ KA GD+
Sbjct: 370 SHKRKADMVWGDET 383
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 155/231 (67%), Gaps = 8/231 (3%)
Query: 531 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
+D+P+ D V+L EPG++ERYYE+KF+ + E R V Y EGLCWV+ YY++G
Sbjct: 393 ADDPDRDPVRLWEPGYRERYYEQKFHVSP--DNVEFRNKVAASYVEGLCWVLLYYFQGCP 450
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SW W+YPYHYAPFA D D+ + +I F+ G PFKPF QL+GV P+AS HALPE ++KLMT
Sbjct: 451 SWTWYYPYHYAPFAQDFNDVGKLDIQFKKGKPFKPFEQLMGVLPAASKHALPEPFQKLMT 510
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
+ +S I DFYP F +D+NGK+++WQG+A LPFIDE RLLD V K+ TLT E+ RN++
Sbjct: 511 EEDSEIIDFYPESFPIDLNGKKFAWQGVALLPFIDEKRLLDAVSKVYPTLTPEDDARNAM 570
Query: 711 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
D+LF + + + D+ + K R + + L+P S G++G +
Sbjct: 571 GHDLLFCSVENDM------YDDVAIRFYYKGRSDDEYDLDPTKSQGLSGKV 615
>gi|62701868|gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/621 (38%), Positives = 328/621 (52%), Gaps = 77/621 (12%)
Query: 193 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
VILSDANVPGEGEHKIMS++R QR GYDPNTRHCLYGLDADLIMLALA+HEVHFSILR
Sbjct: 1535 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 1594
Query: 253 EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG--EFDEKGDEVVVPKKPYQFLHIWTL 310
E V Q+ P + K K +A E E + KKPYQFL+IW L
Sbjct: 1595 EEVLHQNNQENTIPI-TPKTFTSQEAEKFKCRAWFPRITEARPEGKLTKKPYQFLNIWVL 1653
Query: 311 REYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
REYL+ + +IPNP +D+E ++DDF+F+CF GNDF+PH+P+LEI EGAI+LL+ VYK
Sbjct: 1654 REYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIEVYKT 1713
Query: 371 EFRALGGYLTDGSKP--------SLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKRE 422
F +GGY+ D K + R+E F + YE++IF K L R E R+
Sbjct: 1714 SFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHELSLYEEKIFLKCYDL-ARGFEDFGRK 1772
Query: 423 KAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD----------- 471
+ + P G+ +A P + EC R++
Sbjct: 1773 VGEEAEEQQEQGSWVAHPFGPSEPDIGAPVACNTWAVPDRVGEC--RINFQRKIERQAAE 1830
Query: 472 ---NGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDA 528
N + T + + ++ + + S E D N E + LK++L +K D
Sbjct: 1831 NTWNERNTENVEENLD--DQCIMVKSSQTDGQVSDEQDITMNTLELRKNLKDILHNKQDL 1888
Query: 529 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL---------------- 572
+ + DK+KLG PGWK R+++EKF+A+T +E + + ++V
Sbjct: 1889 IKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVTISCFLNYANGILYLTV 1948
Query: 573 -RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLG 631
+Y EGLCWV+ YY+ V SW W+YP++YAPFASD++ L +
Sbjct: 1949 QKYLEGLCWVLCYYFADVPSWSWYYPFYYAPFASDVRGLSR------------------- 1989
Query: 632 VFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
S ALP Y KLM S I FYP++ ++D +GKRY WQGIAKLPFI++ LL
Sbjct: 1990 ------SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLS 2043
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIYTLDEHCKQLKIK-ERVEVKE 747
K E L E RRN++ + +F+ S+ L+ A T D ++L I E+
Sbjct: 2044 VTKTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQTSDCSLQKLPIDPATSEIGG 2103
Query: 748 RLNPELSDGMNGYI-SPCAGD 767
L+P+ D NG+ SP D
Sbjct: 2104 WLSPDDDDFSNGFCGSPIEND 2124
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 135/205 (65%), Gaps = 23/205 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLE----YDNLYLDMN 56
MGVP+FYRWL KYP +V+ +++ V + NG Y NLYLDMN
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDV-----------GSSSNGAAAPPVYHNLYLDMN 49
Query: 57 GIIHPCFHPEDR-----PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
GIIHPCFHP+D+ P PTT +EVF MFDY+DRL +VRP LLY+A+DGVAPRAKM
Sbjct: 50 GIIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKM 109
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK---SDSQVFDSNVITPGTEFMA 168
NQQR+RRF+++ A + EE LR F EG+K+ P+ S S+V D NVIT GTEFM
Sbjct: 110 NQQRARRFKSAMAAKQAEVEENILRDRFRAEGKKVLPRETSSSSEVSDPNVITLGTEFMD 169
Query: 169 VLSIALQYYIHLRLNNDPGWEKIKV 193
LS AL+YYI RLN+DP W+ I V
Sbjct: 170 KLSDALKYYIRARLNSDPLWKDINV 194
>gi|213405427|ref|XP_002173485.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212001532|gb|EEB07192.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 963
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/425 (49%), Positives = 275/425 (64%), Gaps = 15/425 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIE-EEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +R L+ KY V+ VIE V+ DG + D ++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPALFRLLSRKYTKVITPVIEVPSKVLPDGTEFGPDLAEPNPNG-ECDNLYLDMNGIV 59
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRP P T DE+ +F+Y DR+ MVRPR LL +AIDGVAPRAKMNQQRSRRF
Sbjct: 60 HPCSHPEDRPPPETEDEMMLAVFEYTDRILAMVRPRNLLMIAIDGVAPRAKMNQQRSRRF 119
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIALQYYI 178
R++++AA AA E +E + +G + + + +DSN ITPGT FM +L+ AL+YYI
Sbjct: 120 RSAREAAQKAAALEECVREAKEKGIPVDENAAKKKAWDSNCITPGTPFMDILAKALRYYI 179
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+LN +P ++ ++ +LSDA+VPGEGEHKIM ++R QR P YDPNTRH +YGLDADLIM
Sbjct: 180 THKLNTEPAFKNLRFLLSDASVPGEGEHKIMEFIRSQRVNPEYDPNTRHVIYGLDADLIM 239
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE HF +LRE VF + Q G L E KA
Sbjct: 240 LGLATHEPHFRVLREDVFFQQGSTRRSKKEQLG-LVPKIEATEAPKAPV----------- 287
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
KKP+ +L++ LREYL+ E ++PN PF DLE +DD++F FFVGNDFLPH+P+L+IR+
Sbjct: 288 KKPFIWLNVDILREYLEIELQVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRD 347
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GA+ L ++ +GGYLT +L R E + +G ED IF++ + R E
Sbjct: 348 GALERLTEAWRLCLPHMGGYLTLDGSVNLSRAEVILSVIGDQEDEIFRRLKQNEDRRNEN 407
Query: 419 IKREK 423
KR +
Sbjct: 408 QKRRR 412
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 153/228 (67%), Gaps = 8/228 (3%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
E D V+L EPG++ERYY +KF+ + E EE ++ V Y +GLCWV+ YYY+G SW W
Sbjct: 579 EGDTVRLWEPGYRERYYTQKFHFE--ENNEEQIREAVYHYVKGLCWVLLYYYQGCPSWTW 636
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
+YP+HYAPFA+D K+L ISF+L PFKP+ QLLGV P+AS LPE +KLMTDP+S
Sbjct: 637 YYPFHYAPFAADFKNLSSLKISFDLNQPFKPYEQLLGVLPAASKENLPEKLQKLMTDPDS 696
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
I DFYP +F +D+NGK++ WQG+A LPFIDE RLLD V K+ LTEEE+RRN+ +
Sbjct: 697 EIIDFYPENFVIDLNGKKFEWQGVALLPFIDEKRLLDAVAKVYPELTEEESRRNTQGPPL 756
Query: 715 LFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
LF HP+ +E K L K+R +L+ + + G+ G +S
Sbjct: 757 LFFSEKHPM------YNEVVKHLYSKKRQGKPVKLSGKRAHGIFGKVS 798
>gi|413918977|gb|AFW58909.1| hypothetical protein ZEAMMB73_438738 [Zea mays]
Length = 795
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 274/430 (63%), Gaps = 80/430 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P+FY+W+ KYP +++ V ++EP + P+G+ YDNLYLDMN IIH
Sbjct: 1 MGIPSFYKWVVSKYPSIISPV-KDEP-------------EECPDGIIYDNLYLDMNCIIH 46
Query: 61 PCFHPED---------RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
CFHP+D RP PTT +EVF+ MF+Y+DRLF +VRP LLY+A+DGVAP AKM
Sbjct: 47 CCFHPQDQLTHADIDVRP-PTTANEVFESMFEYMDRLFRIVRPTSLLYLAVDGVAPFAKM 105
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
N+ R RF ++ ERL +E PP+ S+V D NVI+PGTEFM +S
Sbjct: 106 NRIRRGRFHSAM---------ERLAEE--------PPREISEVSDPNVISPGTEFMEKVS 148
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
AL+YYI R N+DP W I VILSDA+VPGEGEHKIMS++R Q ++ GYDPNTRHCL+G
Sbjct: 149 EALEYYIRARFNSDPWWRDIMVILSDASVPGEGEHKIMSFIRAQCSMEGYDPNTRHCLFG 208
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIMLALA+HEV+FSILRE V Q++ EG
Sbjct: 209 HDADLIMLALASHEVYFSILREDVLYQNQEE--------------TEGN----------- 243
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
PKK + FL++W LREYL+ EF+I +P E D+E ++DDFIF+CF +GNDF+PH+
Sbjct: 244 ------PKKSFLFLNMWVLREYLEIEFKILDPVCETDIERLIDDFIFICFLMGNDFIPHI 297
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTD--------GSKPSLRRVEHFIQAVGSYEDR 403
P+L+ +EGA++LL+ VYK F +GGY+T+ G+ + R+E F + YED+
Sbjct: 298 PSLKTQEGAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLEVSRLETFFHELSMYEDK 357
Query: 404 IFQKRARLHQ 413
IF KR L Q
Sbjct: 358 IFLKRYDLKQ 367
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 145/284 (51%), Gaps = 32/284 (11%)
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
P+ + E + KL +LL FN +NP D ++LG PGWK R++ E F AKT E +
Sbjct: 382 PESERPELRQKLDDLL------FNEENPY-DSIRLGLPGWKSRFFREHFGAKTSSEIGKL 434
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
+ D+ +Y EGLCWV+ Y+ V SW W+YP++ APF SDLK L + ISF + P +PF
Sbjct: 435 QNDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRIEISFTVDKPLRPF 494
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
+QL+ V P S ALP+ Y K P FY +GK + W+GI+ E
Sbjct: 495 DQLMAVLPMQSWGALPKCYEKKRDTP------FYYPRLVHAKDGKYFLWRGIS------E 542
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVK 746
L + ++ LT E+RRN+ + +F+ H S S+ H EV
Sbjct: 543 ELRLSASEMVDRKLTTLESRRNTTRKEKVFL---HRSSNSV----PHNGGSSSLPHNEVT 595
Query: 747 ERLNPELSDGMNGYISPCAGDPH-PPVFRSPVASMEDIMGNQVL 789
E+ + G+ G+I+P D F SP +++DI +Q +
Sbjct: 596 EQ-----ASGIGGWIAPAYNDGFCDGFFPSPTPNLQDITSDQTI 634
>gi|407040013|gb|EKE39937.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 560
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/421 (47%), Positives = 278/421 (66%), Gaps = 31/421 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL +++P ++ D +P + D ++PN +G+EYDN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDC---KPSSQEKYG---DLNEPNASGVEYDNFYIDMNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+DR +P +++ + Y+D + +VRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPEKIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGR---KLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
++KDA E LRQ + + R LP + DSN ITPGTEFM+V+S L+ Y
Sbjct: 115 SAKDA-----ENAELRQAEDNKKRLMNGLPEVPYVKPLDSNCITPGTEFMSVVSKTLKKY 169
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I R++ W K+ VILSD+ VPGEGEHKIM ++R Q+ P Y+PNT HC+YGLDADLI
Sbjct: 170 IKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHHCMYGLDADLI 229
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML+LATHE FSI+RE VF + D+C++C H C+ +++ G D ++
Sbjct: 230 MLSLATHERFFSIIREKVFF--EDDRCYICNGV-HPPDKCQ--RRKEVGAMD-----TII 279
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KP+QFLH LR YL ++ FE C VDDFIF CF VGNDFLPH+P+L+IR
Sbjct: 280 --KPFQFLHCHILRGYLQITLKVEGFEFE---RC-VDDFIFFCFLVGNDFLPHIPSLDIR 333
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
+GA++LLM VY +EF GGY+T+ ++ ++F+Q VG E I +K+ + + +A+
Sbjct: 334 DGAVDLLMKVY-REFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKMNAK 392
Query: 418 R 418
+
Sbjct: 393 K 393
>gi|363756508|ref|XP_003648470.1| hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891670|gb|AET41653.1| Hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1479
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 257/759 (33%), Positives = 372/759 (49%), Gaps = 124/759 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P + ++DG +I E+D LYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPNISQ--------LLDGSQIS-----------EFDTLYLDMNSILH 41
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D +EV+ +F YID LF ++P+++ YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDADVTKRLSEEEVYLKIFTYIDHLFRTIKPKEVFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAMDA------EKALKKAIE-NGEEIP---SGEPFDSNCITPGTEFMAKLTKNLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H ++++D W + VILS VPGEGEHKIM ++R+ R+ Y+PNTRHC+YGLDADLI+
Sbjct: 152 HEKISSDSLWRQANVILSGHEVPGEGEHKIMEHIRILRSQKDYNPNTRHCIYGLDADLII 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+ H+ HF++LRE V F + + +
Sbjct: 212 LGLSVHDSHFALLREEVL-------------------------------FGKNHNSKPLE 240
Query: 299 KKPYQFLHIWTLREYLDYEF-RIPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
++ + LHI LREYL+ EF + N FE D E ++DDFI + F +GNDFLP++P L +
Sbjct: 241 QQNFFLLHISILREYLELEFAELENELMFEYDFERLLDDFILVLFVIGNDFLPNLPDLHL 300
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---ARLHQ 413
+GA +L+ +K+ R + GY+ + + R +++ + +E F++
Sbjct: 301 NKGAFPVLLQTFKEALRHMDGYMNECGTINFSRFSIWLEYLSKFEKANFERSDIDIEWFN 360
Query: 414 RHAERIKREKAQAR----------RGDDVEPLAQPDSLVPVSRFHGSRLASGP---SPSP 460
+ E I E A+ R R + +P L V + ++ SP P
Sbjct: 361 QQLENISLEGARKRVKSGKKLLLKRQRQIVGAVKPWLLKTVEEKLSANVSDADITLSP-P 419
Query: 461 YQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKE 520
+D K + + V S V+ + SF + E EE K++L
Sbjct: 420 LAGHLVANNIDFLKELAFELYLVVVHSQSQDTYTFKVDLD-SFNLNASE--EEHKSRLSN 476
Query: 521 LLRD----------------------KSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAK 558
L R D FN K KLG YY+++ +
Sbjct: 477 LRRSIKIFEQATIVDDEEELEEKMEIYDDRFNQWKDAYYKEKLGFS-----YYDDEKLKE 531
Query: 559 TPEEREETRKDVVLRYTEGL-CWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 617
E E + V+ Y +G W SW +Y YHYAP SD+ ISF
Sbjct: 532 QTENYVEGLQWVLYYYYQGCPSW----------SW--YYKYHYAPRISDIIKGINKKISF 579
Query: 618 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 677
E PF PF QL+ V P S + +P YR LM D SPI DFYP D E+D NGK W+
Sbjct: 580 EKNRPFTPFQQLMSVLPKRSKNLIPPVYRPLMYDEKSPILDFYPNDVELDKNGKTADWEA 639
Query: 678 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
+ K+ F+D RL+ + + L +EE RN D+LF
Sbjct: 640 VVKISFVDAERLIKVMAPYDEKLNQEEKDRNRFGTDILF 678
>gi|115446147|ref|NP_001046853.1| Os02g0481900 [Oryza sativa Japonica Group]
gi|47848619|dbj|BAD22468.1| putative 5'-3' exoribonuclease [Oryza sativa Japonica Group]
gi|113536384|dbj|BAF08767.1| Os02g0481900 [Oryza sativa Japonica Group]
Length = 822
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/449 (46%), Positives = 271/449 (60%), Gaps = 90/449 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P+FYRWL +YP +V+ E P DG+ + YDNLYLDMN IIH
Sbjct: 1 MGIPSFYRWLVNRYPSIVSPAKESRPA--DGIVV-------------YDNLYLDMNQIIH 45
Query: 61 PCFHPEDR-------PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN- 112
FHP+D+ APTT EVF+ MFDY+DRLF +VRPR+LLY+A+DGVAP AKMN
Sbjct: 46 YSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNG 105
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
+R RRF A+EEE ++ K V D NVITPGTEFM +S
Sbjct: 106 MRRGRRFAW-------ASEEEEMQ------------KISEGVSDPNVITPGTEFMEKISQ 146
Query: 173 ALQYYIHLRLNN-DPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
AL YYI RLN+ DPGW+ I VILSDANVPGEGEHKIMS++R QR++ GYDPNTRHCL+G
Sbjct: 147 ALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFG 206
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIMLALA+HEVHFSILRE D
Sbjct: 207 HDADLIMLALASHEVHFSILRE-----------------------------------DNS 231
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
P+K Y FL+IW LREYL+ E +I +P E D+E ++DDFIF+CF +GNDF+PH+
Sbjct: 232 QLTEADPEKQYLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHI 291
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS--------LRRVEHFIQAVGSYEDR 403
P+LE++E A++LL+ VYK F +GGY+ + K + R+E F + YE++
Sbjct: 292 PSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEK 351
Query: 404 IFQKRARLHQRHAER----IKREKAQARR 428
IF KR L Q ++ + RE +++ R
Sbjct: 352 IFLKRYELEQESLKKSCRDVLREASESER 380
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 154/293 (52%), Gaps = 33/293 (11%)
Query: 511 KEEFKAKLKELLRDKSDA-------------FNSDNPEEDKVKLGEPGWKERYYEEKFNA 557
+E K +++LR+ S++ FN + P DK++LG PGWK R+Y E F
Sbjct: 361 QESLKKSCRDVLREASESERLELSRKLEDRFFNEERPY-DKLRLGLPGWKSRFYREYFGI 419
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISF 617
+T E + D+ +Y EGLCW++ YY V SW W+YP++ APF SDLK +F ISF
Sbjct: 420 ETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSNCRFEISF 479
Query: 618 ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQG 677
+ P +PF+QL+ V P SS ALPE YRK+M +F + D GKR+ W+
Sbjct: 480 TVDKPLRPFDQLMAVLPLRSSCALPECYRKVMGR-----KEFDHPKLQADTIGKRFLWKC 534
Query: 678 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQL 737
I+ E LL K+++ L+ E RRN+ + +F+ +++ L + QL
Sbjct: 535 IS------EEELLQATKELDKELSMHEMRRNTPRQEKIFL----QRNSNAQALAKVIVQL 584
Query: 738 KIKE-RVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ E K ++ +S G+ G++SP F SP+ +++DI +Q +
Sbjct: 585 QTSSCSPEQKLPIDSAIS-GLGGWLSPDGLSNG--FFCSPLQNLQDITNDQAI 634
>gi|218190750|gb|EEC73177.1| hypothetical protein OsI_07223 [Oryza sativa Indica Group]
Length = 790
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/449 (46%), Positives = 271/449 (60%), Gaps = 90/449 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P+FYRWL +YP +V+ E P DG+ + YDNLYLDMN IIH
Sbjct: 1 MGIPSFYRWLVNRYPSIVSPAKESRPA--DGIVV-------------YDNLYLDMNQIIH 45
Query: 61 PCFHPEDR-------PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN- 112
FHP+D+ APTT EVF+ MFDY+DRLF +VRPR+LLY+A+DGVAP AKMN
Sbjct: 46 YSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNG 105
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
+R RRF A+EEE ++ K V D NVITPGTEFM +S
Sbjct: 106 MRRGRRFAW-------ASEEEEMQ------------KISEGVSDPNVITPGTEFMEKISQ 146
Query: 173 ALQYYIHLRLNN-DPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
AL YYI RLN+ DPGW+ I VILSDANVPGEGEHKIMS++R QR++ GYDPNTRHCL+G
Sbjct: 147 ALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFG 206
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIMLALA+HEVHFSILRE D
Sbjct: 207 HDADLIMLALASHEVHFSILRE-----------------------------------DNS 231
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
P+K Y FL+IW LREYL+ E +I +P E D+E ++DDFIF+CF +GNDF+PH+
Sbjct: 232 QLTEADPEKQYLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHI 291
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS--------LRRVEHFIQAVGSYEDR 403
P+LE++E A++LL+ VYK F +GGY+ + K + R+E F + YE++
Sbjct: 292 PSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEK 351
Query: 404 IFQKRARLHQRHAER----IKREKAQARR 428
IF KR L Q ++ + RE +++ R
Sbjct: 352 IFLKRYELEQESLKKSCRDVLREASESER 380
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 120/227 (52%), Gaps = 19/227 (8%)
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPF 623
EE D +Y EGLCW++ YY V SW W+YP++ APF SDLK +F ISF + P
Sbjct: 394 EERPYDKAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSHCRFEISFTVDKPL 453
Query: 624 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 683
+PF+QL+ V P SS ALPE YRK+M +F + D GKR+ W+ I+
Sbjct: 454 RPFDQLMAVLPLRSSCALPECYRKVMGR-----KEFDHPKLQADTIGKRFLWKCIS---- 504
Query: 684 IDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKE-R 742
E LL K+++ L+ E RRN+ + +F+ +++ L + QL+
Sbjct: 505 --EEELLQATKELDKELSMHEMRRNTPRQEKIFL----QRNSNAQALAKVIVQLQTSSCS 558
Query: 743 VEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
E K ++ +S G+ G++SP F SP+ +++DI +Q +
Sbjct: 559 PEQKLPIDSAIS-GLGGWLSPDGLSNG--FFCSPLQNLQDITNDQAI 602
>gi|326436856|gb|EGD82426.1| hypothetical protein PTSG_11962 [Salpingoeca sp. ATCC 50818]
Length = 1282
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/420 (50%), Positives = 276/420 (65%), Gaps = 28/420 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
+GVP+FYRWL+ KYP V DV+E+ P I G +PVD S+PNPN E+DNLYLDMNGIIH
Sbjct: 44 VGVPSFYRWLSRKYPKCVKDVVEDRPQNIGGEYVPVDISQPNPNKREFDNLYLDMNGIIH 103
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
P HPEDRPAP T D++F + +Y+DR+ VRPRKLL+MAIDGVAPRAKMNQQRSRRF+
Sbjct: 104 PASHPEDRPAPETEDDMFVAVLEYLDRVVACVRPRKLLFMAIDGVAPRAKMNQQRSRRFK 163
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++K ++ + FDSNVITPGT FM L+ L+ +IH
Sbjct: 164 SAKVCLNAVLWWGCVVGGGGVCIS----VCVCVTFDSNVITPGTPFMDKLAEYLRCFIHE 219
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
++++DPGW IKVILSDA VPGEGEHKIM ++R QR P YD NT H ++GLDADLI+LA
Sbjct: 220 KVSSDPGWTGIKVILSDATVPGEGEHKIMDFIRRQRAHPEYDANTSHVIHGLDADLILLA 279
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE HF+ILRE V TP ++K Q +AA A R+ V +
Sbjct: 280 LATHEPHFTILREEV-TPRNREK---SAQEKAMAA----LAVRR----------VCI--- 318
Query: 301 PYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ FL + LREYL+ E R+ + DLE ++DDF+FMC FVGNDFLPH+P+L+I E
Sbjct: 319 -WIFLQVNVLREYLEKEMRVADFSAAGGFDLERVIDDFVFMCCFVGNDFLPHLPSLKINE 377
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GAI+ ++ +Y+K+F A GGYLT S+ +L RV+ + + E++I R QR ++
Sbjct: 378 GAIDTILDLYRKDFPAFGGYLTQSSEVNLERVQLLLHGLAEVENKILSDRRFKEQRRKQK 437
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 144/221 (65%), Gaps = 8/221 (3%)
Query: 511 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 570
++ KA +KE LR+ +D + E++V LG G+ ERYY+ KF +DV
Sbjct: 603 RDALKAAVKERLRNMNDKRVEQH--EEQVNLGLHGYHERYYKLKFGDSV------QPRDV 654
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
Y EGLCWVM YYYEG SW WFYPYHYAPFA D D+ +I F+ G PF PF QL+
Sbjct: 655 ARAYVEGLCWVMKYYYEGCPSWNWFYPYHYAPFAQDFVDVAGMSIRFDGGSPFTPFQQLM 714
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
VFP ASSHALP+ YR LM DP SPI+DFYP +FE+D +G R++WQ +A LPFIDE RLL
Sbjct: 715 AVFPPASSHALPQAYRNLMLDPKSPIADFYPREFELDFDGARFAWQAVALLPFIDETRLL 774
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLD 731
+ +E TLTEEE RRN+ ++L V HPL+ + LD
Sbjct: 775 TAIAPLESTLTEEERRRNARGVNLLHVHQRHPLALQVVPLD 815
>gi|238878282|gb|EEQ41920.1| 5'-3' exoribonuclease 1 [Candida albicans WO-1]
Length = 1422
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 250/665 (37%), Positives = 348/665 (52%), Gaps = 102/665 (15%)
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNV 159
MAIDGVAPRAKMNQQR+RRFR + +A E L++ E G ++P K D FDSN
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYEA------EINLKKAIEN-GEEIP-KEDP--FDSNS 50
Query: 160 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 219
ITPGTEFMA L+ L+Y+IH ++ D W I++ILS VPGEGEHKIM Y+R R+
Sbjct: 51 ITPGTEFMAKLTNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQD 110
Query: 220 GYDPNTRHCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCE 278
Y+PN RHC+YGLDADLIML L TH+ HF++LR EV F P
Sbjct: 111 DYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGP-------------------- 150
Query: 279 GKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDF 336
+RK G D + + + LH+ LREYL EF+ I N FE D + I+DDF
Sbjct: 151 ---QRKVGPKD-------LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDF 200
Query: 337 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 396
I + + +GNDFLP++P L I +GA LL+A +K+ GY+ + K +L R+ +I+
Sbjct: 201 ILIMYVIGNDFLPNLPDLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKI 260
Query: 397 VGSYEDRIFQKRARLHQRHAE---------RIKREKAQARRGDDVEPLAQPDSLVPVSRF 447
+ +E F+K H+ E I EK + R G + L + LV +
Sbjct: 261 LSKFEFENFEK----HEVDVEWFNKKLDDISISGEKKRQRIG-KLLILKEQKKLVGFIKP 315
Query: 448 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP 507
AS P +E + GK + +K + I +EA F
Sbjct: 316 WLMEWASQPI------NEILNLDQQGKLPTLHLNKDDVEKNLEFIKEFAIEA--GFLIIH 367
Query: 508 QENKEEFKAKLK-----------------ELLRDKSDAFNSDNPEEDKVKLGEP------ 544
++ + ++AKL LR + S N E + L E
Sbjct: 368 SQSNDTYEAKLDIDGISPTESEEEHEERITELRKTIKQYQSANLIESEEVLNETKEVYSE 427
Query: 545 ---GWKERYYEEKFNAKTPEEREETRKDVV---LRYTEGLCWVMHYYYEGVCSWQWFYPY 598
WK YY+ K + + EE + D++ Y EGL WV++YYY G SW W+Y Y
Sbjct: 428 KFQSWKNDYYQSKLHFSI--DTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRY 485
Query: 599 HYAPFASD----LKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
HYAP SD L++L ++ ++ FEL HPFKPF QL+ V P+ S +P YR LM+D
Sbjct: 486 HYAPRISDISLGLEELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDE 545
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
SPI +FYP + ++DMNGK SW+ + L F+DE +L++ +K IE LT EE +RNS
Sbjct: 546 KSPIINFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNSYGH 605
Query: 713 DMLFV 717
+ F+
Sbjct: 606 AIKFI 610
>gi|68467492|ref|XP_722179.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
gi|46444129|gb|EAL03406.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
Length = 1422
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 250/665 (37%), Positives = 348/665 (52%), Gaps = 102/665 (15%)
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNV 159
MAIDGVAPRAKMNQQR+RRFR + +A E L++ E G ++P K D FDSN
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYEA------EINLKKAIEN-GEEIP-KEDP--FDSNS 50
Query: 160 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 219
ITPGTEFMA L+ L+Y+IH ++ D W I++ILS VPGEGEHKIM Y+R R+
Sbjct: 51 ITPGTEFMANLTNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQD 110
Query: 220 GYDPNTRHCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCE 278
Y+PN RHC+YGLDADLIML L TH+ HF++LR EV F P
Sbjct: 111 DYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGP-------------------- 150
Query: 279 GKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDF 336
+RK G D + + + LH+ LREYL EF+ I N FE D + I+DDF
Sbjct: 151 ---QRKVGPKD-------LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDF 200
Query: 337 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 396
I + + +GNDFLP++P L I +GA LL+A +K+ GY+ + K +L R+ +I+
Sbjct: 201 ILIMYVIGNDFLPNLPDLFINKGAFPLLIAAFKQTLLESDGYINENGKINLVRLNIYIKI 260
Query: 397 VGSYEDRIFQKRARLHQRHAE---------RIKREKAQARRGDDVEPLAQPDSLVPVSRF 447
+ +E F+K H+ E I EK + R G + L + LV +
Sbjct: 261 LSKFEFENFEK----HEVDVEWFNKKLDDISISGEKKRQRIG-KLLILKEQKKLVGFIKP 315
Query: 448 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDP 507
AS P +E + GK + +K + I +EA F
Sbjct: 316 WLMEWASQPI------NEILNLDQQGKLPTLHLNKDDVEKNLEFIKEFAIEA--GFLIIH 367
Query: 508 QENKEEFKAKLK-----------------ELLRDKSDAFNSDNPEEDKVKLGEP------ 544
++ + ++AKL LR + S N E + L E
Sbjct: 368 SQSNDTYEAKLDIDGISPTESEEEHEERITELRKTIKQYQSANLIESEEVLNETKEVYSE 427
Query: 545 ---GWKERYYEEKFNAKTPEEREETRKDVV---LRYTEGLCWVMHYYYEGVCSWQWFYPY 598
WK YY+ K + + EE + D++ Y EGL WV++YYY G SW W+Y Y
Sbjct: 428 KFQSWKNDYYQPKLHFSI--DTEEGKGDLIEMTKHYIEGLQWVLYYYYRGCPSWNWYYRY 485
Query: 599 HYAPFASD----LKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
HYAP SD L++L ++ ++ FEL HPFKPF QL+ V P+ S +P YR LM+D
Sbjct: 486 HYAPRISDISLGLEELINEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDE 545
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
SPI +FYP + ++DMNGK SW+ + L F+DE +L++ +K IE LT EE +RNS
Sbjct: 546 KSPIINFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQRNSYGH 605
Query: 713 DMLFV 717
+ F+
Sbjct: 606 AIKFI 610
>gi|358342156|dbj|GAA49686.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 314
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 178/285 (62%), Positives = 218/285 (76%), Gaps = 4/285 (1%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID--GVKIPVDTSKPNPNGLEYDNLYLDMNGI 58
MGVPAF+RWL+ KYP +V+ +E+ ++D G + PVDT++PNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSMKYPSIVSHCVEKRGPILDNQGTRGPVDTTEPNPNGQEFDNLYLDMNGI 60
Query: 59 IHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPE +PAP E+F +F+YIDRLF ++RPR++LYMAIDGVAPRAKMNQQRSRR
Sbjct: 61 IHPCTHPESKPAPKNEAEMFVAIFEYIDRLFAIIRPRRILYMAIDGVAPRAKMNQQRSRR 120
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPP-KSDSQVFDSNVITPGTEFMAVLSIALQYY 177
FRA+K+A + ERLR E + G LPP KS+ + FDSN ITPGT FMA L++AL+YY
Sbjct: 121 FRAAKEAKEKHMTIERLRNELQARGAHLPPAKSEEEHFDSNCITPGTPFMARLAVALRYY 180
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ RLN+DPGW+ I V LSDANVPGEGEHKIM ++R QR+ P +D NTRHCL G DADLI
Sbjct: 181 IYDRLNSDPGWKNIMVFLSDANVPGEGEHKIMDFIRRQRSAPDHDANTRHCLCGADADLI 240
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK 282
ML LATHE +F+I+RE F P Q C LCGQ GH +C G K
Sbjct: 241 MLGLATHEPYFTIIRE-EFKPNQPKPCDLCGQIGHEMEDCVGAPK 284
>gi|440792890|gb|ELR14098.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 862
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/429 (46%), Positives = 271/429 (63%), Gaps = 18/429 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL ++YP VV D +EEE D + + PNPNG+E+D+L+LDMNGIIH
Sbjct: 1 MGVPSFFRWLMKRYPHVVTDCVEEEHSGDDDINKKLG---PNPNGMEFDSLFLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
HPED PAP + + + + MF +I+RL +VRPRKLLY+ IDGVAPRAKMNQQRSRRF
Sbjct: 58 RATHPEDGPAPESEEAMMEVMFAFIERLVNIVRPRKLLYIGIDGVAPRAKMNQQRSRRFL 117
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+K + EE + + E +G K P K +FD NVITPGTEFMA + AL+ +
Sbjct: 118 AAKHRLE---EEAKAKAE-PADGGKQPAKP---IFDHNVITPGTEFMARAAEALRAHFAR 170
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+++ DP W + VILSD+ VPGEGEHKIM ++R QR GY+PN +YGLDADLI L
Sbjct: 171 KISADPNWSPLAVILSDSCVPGEGEHKIMEFIRHQRIQEGYNPNAHMAVYGLDADLIFLT 230
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC-EGKAKRKAGEFDEKGDEVVVPK 299
LA HE FSILRE V CF+C + GH++ +C + + + D++ ++ P+
Sbjct: 231 LAQHEPRFSILREEV----SSVTCFVCHKVGHISTDCPQLHPEEHKHDDDDEENDEQPPE 286
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+Q++H LREYLD EFR + F LE ++DDFI +CF GNDFLP +P++ I EG
Sbjct: 287 LRFQWVHTQVLREYLDREFRHLSLSFPYSLERVIDDFIVICFLAGNDFLPRLPSVAIHEG 346
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA---RLHQRHA 416
AI+ L+ YK L GY+ RR+EH + V + E+ + ++R R Q
Sbjct: 347 AIDTLIGAYKHHLPQLDGYICTNGNIDFRRLEHVVAMVAASEEAVLKERKKNFRRRQLQE 406
Query: 417 ERIKREKAQ 425
+ + RE AQ
Sbjct: 407 KALLRELAQ 415
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 122/196 (62%), Gaps = 9/196 (4%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V++GE GW++RY +KF P E + VV Y EGL WV YY++G SW+WFYPY
Sbjct: 478 VRIGERGWRDRYVMQKFG--VPSANREFYQGVVRAYVEGLQWVARYYWQGCVSWKWFYPY 535
Query: 599 HYAPFASDLKDLDQFN-----ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
HY P A+ L+D+ +F SF+L PF PF QL+ V P+AS+HALP + LMT
Sbjct: 536 HYPPMATMLEDIGRFRSAEVVASFQLAEPFHPFAQLMAVLPAASAHALPPPCQALMTSAQ 595
Query: 654 SPISDFYPTDFEVDMNGKRYS--WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
SPI+D+YPT E+DM+G ++ W G+ KLPF+DE RLL +K +E LT EE RNS
Sbjct: 596 SPIADYYPTKIEIDMDGVSHNLEWAGVVKLPFVDENRLLAVIKPLESQLTAEEVHRNSFG 655
Query: 712 ADMLFVLLSHPLSASI 727
L + + PL ++
Sbjct: 656 LPRLLIGPASPLHHAL 671
>gi|367035618|ref|XP_003667091.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
gi|347014364|gb|AEO61846.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
Length = 561
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/305 (58%), Positives = 226/305 (74%), Gaps = 12/305 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIEE+P+V+ DG +PVDT++PNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSAKYPKIISPVIEEKPLVLEDGTVVPVDTTQPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDKPAPRDEEEMMIEVFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDS------QVFDSNVITPGTEFMAVLSIA 173
RA++DA + +++L + ++E K +S + FDSN ITPGT FM +L+ +
Sbjct: 121 RAAQDAKEKEEGKQQLLKMLKKENGSDATKEESVEAVVKKAFDSNSITPGTPFMDILAAS 180
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+ +LN DP W K+KVI+SDA VPGEGEHKIM +VR QRN P +DPNTRH +YGLD
Sbjct: 181 LRYWCAYKLNTDPAWAKLKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLD 240
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDK---CFLCGQPGHLAANCEGKAKRKAGEFDE 290
ADLIML LATHE HF +LRE VF QQ K C LCGQ GH NC+G+AK K G+ DE
Sbjct: 241 ADLIMLGLATHEPHFRVLREDVFF--QQSKPRLCKLCGQTGHDERNCKGEAKEKNGDLDE 298
Query: 291 KGDEV 295
KG V
Sbjct: 299 KGKGV 303
>gi|440293117|gb|ELP86279.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 881
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 207/431 (48%), Positives = 266/431 (61%), Gaps = 26/431 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+F+RWL +KYP ++ + D PN NG E DN YLDMNG+IH
Sbjct: 1 MGVPSFFRWLEKKYPKII------DACQGSNKTDHTDLDSPNLNGFEIDNFYLDMNGLIH 54
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHP+DRPAP T D++ + Y+D + +VRPRKL+YMA+DGVAPRAKMNQQR+RRF+
Sbjct: 55 PCFHPQDRPAPDTIDDMLIMLKRYLDYIIDIVRPRKLVYMAVDGVAPRAKMNQQRARRFK 114
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A++DA +E+ ++G P + DSN ITPGT FM ++ L+ Y+
Sbjct: 115 AARDAQSKEEYDEQKNITLIQQGHS--PIAIKPTLDSNCITPGTVFMERVTETLKEYVKE 172
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R++ W+K+ VI+SDA+VPGEGEHKIM Y+R Q++ P Y+PN HC+YGLDADLIML
Sbjct: 173 RISTSAYWKKLVVIISDASVPGEGEHKIMEYIRKQKDQPNYNPNIHHCIYGLDADLIMLT 232
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE FSI+RE VF + C++CGQ GH C K + G D +K
Sbjct: 233 LATHERKFSIIREQVFF--EHVPCYICGQQGHAPDRCSHKG--EIGAMDP-------IRK 281
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
P+ FLH LREYL RI D E I+DDFIF CFFVGNDFLPH P+LEIREG+
Sbjct: 282 PFLFLHCHILREYLSKTIRIEG----FDFERIIDDFIFFCFFVGNDFLPHSPSLEIREGS 337
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I++LM VY K F GYLTD + ++F+ VG E RI Q ++ R RI
Sbjct: 338 IDMLMEVYMK-FLPENGYLTDSGTLNATHAKNFMSLVGQREQRILQSKSEKESRF--RIN 394
Query: 421 REKAQARRGDD 431
R+ R DD
Sbjct: 395 RKGKMIREFDD 405
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
E + + G++ +YY K + P E +V Y GL WV+ YYY+G W W
Sbjct: 442 ESEDINYSMNGYQAKYYASKLKIEYPSE---AMTQLVNEYFIGLSWVLKYYYQGCQCWDW 498
Query: 595 FYPYHYAPFASDLKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
++PY YAPF +D+ + FELG PFKP QL+ V P S +P +R +M
Sbjct: 499 YFPYLYAPFIADVATYLDNTLEPKFELGIPFKPVEQLMSVLPPRSKECVPMLFRDIMNST 558
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
SPI +FYP F +DMNGK + + L FID+ +LL+ +K +E L +E +RN
Sbjct: 559 TSPIKEFYPEKFAIDMNGKTQEYLAVILLSFIDQNKLLEVLKPLEKQLQGQEFKRN 614
>gi|340057226|emb|CCC51568.1| putative exoribonuclease 2 [Trypanosoma vivax Y486]
Length = 783
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 243/736 (33%), Positives = 360/736 (48%), Gaps = 121/736 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ F+ WL Y + DV E V+ + + + ++DNLYLDMNG++H
Sbjct: 1 MGIAGFFLWLRRWYGPCIEDVPES---VVQALLKGEAPPEADMGHWKFDNLYLDMNGLVH 57
Query: 61 PCFH-PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC H P P + +E+F +F +D +F +V+PRK L M +DGVAP++KMNQQRSRRF
Sbjct: 58 PCCHDTAPLPEPKSEEEMFDRIFSQLDLVFRVVQPRKCLVMCVDGVAPQSKMNQQRSRRF 117
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+++ A+S + E G LP S +D NVITP T FM L +A++++I
Sbjct: 118 RAAEERAESDQLAMQCADELVEMG--LPRPSPKSRWDHNVITPSTPFMERLGVAVEWFIG 175
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++N DP W+K+ V+ SD++VPGEGEHKIM ++R R+ PGY+P T H +YG+DADLI L
Sbjct: 176 KKVNEDPAWQKVAVVFSDSHVPGEGEHKIMQFIRGLRSQPGYNPQTSHVIYGMDADLICL 235
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L+THE + +ILR + Q G P
Sbjct: 236 GLSTHEENVTILRNQLSETFQ-------GTPN---------------------------- 260
Query: 300 KPYQFLHIWTLREYLDYEFR-IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + ++ R++L +F+ I N +D E ++DDF+F+CFFVGNDFLPH+P L I+
Sbjct: 261 -TFCYFSLFKYRQFLKRDFKNIAN----MDFERVIDDFVFLCFFVGNDFLPHVPLLSIKT 315
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE- 417
I L+ Y ++F+ YLT+ + + F++ + L Q + E
Sbjct: 316 KGIESLLDHYVRDFQN-HSYLTEKGEVKFGVLSSFLRHF------VVDYLCALRQEYLEL 368
Query: 418 RIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTS 477
R ++A+A +VE RL GKG +
Sbjct: 369 RNVTKRARA----NVE----------------QRL--------------------GKGEN 388
Query: 478 GRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED 537
+ L + A + EA + + + + F A + + F+ +P+
Sbjct: 389 ELKEVLDSLKEDGSNAAEVSEAAHGIKLSLAKERARFVADRESM------GFSYTDPD-- 440
Query: 538 KVKLGEPGWKERYYEEKF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+++ YYE+KF +A E+ K + Y G WVM YY G +W+W+
Sbjct: 441 --------YRDAYYEKKFGWSASNRTRFEKQIKRLCGEYLRGTQWVMRYYTSGCPAWEWY 492
Query: 596 YPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
YPYHYAP DL + N+ ELG P P QLL V P S HALP + DP+S
Sbjct: 493 YPYHYAPLLEDLAAFNGNVNVKMELGAPRHPIVQLLAVQPRLSLHALPVELHSAVMDPHS 552
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADM 714
+ FYP EVD + +S+QGI +LPFID LL + TL E E R S +
Sbjct: 553 VLGKFYPDSVEVDYSEANFSYQGIMRLPFIDCQELLRACE----TLVELEPDRGST---L 605
Query: 715 LFVLLSHPLSASIYTL 730
LF +S + + L
Sbjct: 606 LFCHMSSRIGKLLRAL 621
>gi|336468281|gb|EGO56444.1| hypothetical protein NEUTE1DRAFT_130400 [Neurospora tetrasperma
FGSC 2508]
Length = 513
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 173/300 (57%), Positives = 222/300 (74%), Gaps = 11/300 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE++P+ + DG IPVD +KPNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-------FDSNVITPGTEFMAVLSI 172
RA+++A + ++++ + +++ K P+ + V FDSN ITPGT FM +L+
Sbjct: 121 RAAREAMEKEEDKQKFVELLKKQNGK--PQEEEPVEIVVKKAFDSNSITPGTPFMDILAA 178
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
+L+Y+ +LN DP W IKVI+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGL
Sbjct: 179 SLRYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGL 238
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML LATHE HF +LRE VF + + C +CGQ GH A NC+G+AK K GEFDEK
Sbjct: 239 DADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEK 298
>gi|358400793|gb|EHK50119.1| hypothetical protein TRIATDRAFT_280608 [Trichoderma atroviride IMI
206040]
Length = 454
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 168/289 (58%), Positives = 215/289 (74%), Gaps = 7/289 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE+ P+V DG+ IPVDT++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEQTPIVTEDGITIPVDTTQPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFKYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-----FDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +R+ +DS+ FDSN ITPGT FM +L+++L
Sbjct: 121 RSAQEAKEKEEDKQALIELLKRQNGGTFAAADSETVVKKAFDSNSITPGTPFMDILALSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y+ +LN DP W K+K+I+SDA VPGEGEHKIM++VR QR P YDPNTRH +YGLDA
Sbjct: 181 RYWCQYKLNTDPAWAKLKIIISDATVPGEGEHKIMNFVRSQRASPNYDPNTRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAK 282
DLIML LATHE HF +LRE V F G+ C LCGQ GH A NC G AK
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDGKNRACKLCGQKGHEANNCRGNAK 289
>gi|406701694|gb|EKD04809.1| strand exchange protein (5'-3' exoribonuclease) [Trichosporon
asahii var. asahii CBS 8904]
Length = 1632
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/388 (48%), Positives = 256/388 (65%), Gaps = 20/388 (5%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGI+HPC HPE R AP T ++ +F Y +R+ M RPRK+L+MAIDGVAPRAKMNQQ
Sbjct: 1 MNGIVHPCTHPEGRDAPPTEQDMMVEVFKYTERVVNMARPRKVLFMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIA 173
RSRRFRAS++AA+ E ++ FE G+ + ++ + + +DSN ITPGT FM +LS +
Sbjct: 61 RSRRFRASQEAAEKEEERKQQIAMFEAMGQTVSDETKNKKSWDSNAITPGTPFMDLLSAS 120
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y++ +L+ DPGW+ VI+SDA+VPGEGEHKI+ ++R +R P +DPNT H +YGLD
Sbjct: 121 LKYWVSHKLSTDPGWK--DVIISDASVPGEGEHKIVDWIRRERTYPEWDPNTSHAIYGLD 178
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGEFDEK 291
ADLIMLALATHE +F +LRE VF + C CG+ GH+ ANC+G+ K
Sbjct: 179 ADLIMLALATHEPNFRVLREDVFAQSSRGPRVCDNCGKEGHIKANCKGEKKMP------- 231
Query: 292 GDEVVVPK------KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 345
D VV K KP+ +L + LR+YL E +P F D E +DD+IFM FFVGN
Sbjct: 232 -DPNVVAKAKPEDPKPFIWLDVACLRDYLAVELNVPT-SFPFDQELAIDDWIFMIFFVGN 289
Query: 346 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
DFLPH+P+LEIREGAI+ L+ ++K+E +GGYLT+ K +L R + + + + ED IF
Sbjct: 290 DFLPHLPSLEIREGAIDTLLEIWKRELDRMGGYLTNHGKVNLGRAQIILDGIAAREDNIF 349
Query: 406 QKRARLHQRHAERIKREKAQARRGDDVE 433
Q+R R KR + + R D+E
Sbjct: 350 QQRKEQEDRQERNAKRRRKEDHRRQDME 377
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+L EPG++ERYY +KF + +++ ++ Y EGLCWV+ YYY+GV +W W+
Sbjct: 575 EDTVRLWEPGYRERYYRQKFGVELSDKK--FMSEITRSYMEGLCWVLEYYYQGVPAWDWY 632
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YPYHYAPFA D D+ +I F G+PF PF QLLGVFP+AS LPE + LM + +SP
Sbjct: 633 YPYHYAPFAQDFHDVGSLDIKFRKGNPFTPFGQLLGVFPAASRIHLPEPLQTLMIEEDSP 692
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
I DFYP+DFE+DMNGK+ +WQG+A LPFID+ RLL +K E L+++E RRN+ +
Sbjct: 693 IIDFYPSDFEIDMNGKKMAWQGVALLPFIDQHRLLAALKSKEPELSQDEKRRNTWGEPRM 752
Query: 716 FV 717
FV
Sbjct: 753 FV 754
>gi|403367227|gb|EJY83428.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1484
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 229/749 (30%), Positives = 378/749 (50%), Gaps = 121/749 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+RWL +YPL++ +V +EE P+D NLYLD+NGI+H
Sbjct: 1 MGIPKFFRWLTRRYPLILQNVQKEEDCP------PID------------NLYLDLNGIVH 42
Query: 61 PCFHPEDRPAP-------TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
C H D P+ FDEV+ + ID + V+P+KLL++A+DGVAPRAKMNQ
Sbjct: 43 NCIHGND-PSKHEKVSKMEDFDEVWVSIMRAIDEIVHSVKPKKLLFLAVDGVAPRAKMNQ 101
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR+RRFR++K+A +S R++ +EG++ P ++FD+N I+PGT+FM L
Sbjct: 102 QRARRFRSAKEAFES-------REQLRQEGKEAP-----ELFDTNAISPGTQFMFELCKQ 149
Query: 174 LQYYIHLRLNNDPGWEKI-KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L +++ + N DP ++ + +VI+SD ++PGEGEHK+M ++R + P YDPNTRHC YG
Sbjct: 150 LHFFVQYKTNVDPLYQNLAQVIVSDGSIPGEGEHKMMDFIRQAKQSPQYDPNTRHCFYGA 209
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DADLIML+L THE HF I+RE H+ K+K+ + +K
Sbjct: 210 DADLIMLSLLTHEPHFIIIRE-----------------EHIFK----KSKQGGVQRIDKK 248
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDFLPH 350
+V +Q ++I LREY + E++ +I DLE I+DDF+F CFF+GNDFLP
Sbjct: 249 KQV-----NFQIVYINLLREYFELEYKPLQSQMKIQFDLERIIDDFVFFCFFIGNDFLPS 303
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
+ L+I EG+++ L+ +Y+K + Y+T+ R + FI+ +G +E F +R
Sbjct: 304 LSALDISEGSLDQLIKLYRKLLPQMDNYITESGTIYWDRAQPFIKMLGEHEHESFIERVN 363
Query: 411 LHQRHAERIKREKA------------QARRGDD--VEPLAQPDSLVPVSRFHGSRLASGP 456
++ E++ Q G D ++ + L+ V R+
Sbjct: 364 QMRQRGGGRGGEQSIVSSSVREVQTTQTFIGKDGKIDRKREIQRLIQVKIQDKKRMKIVS 423
Query: 457 SPSPYQQSECVGRLDNGKGTSGRPH-KVPRLSSGATIGAAIVEAENSFETDPQE---NKE 512
+ + K + ++ +L + E N E D +E +++
Sbjct: 424 MIEKKKDKSYKKYITIKKYQEDKDQDEIEKLKVLEKYQRKLWEQNNGSEEDKEEFQFDRD 483
Query: 513 EFKAKLKELLRDKSDAFNSDNPE----EDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
+ +L L++D D+F+ +P +D + E + +EK + + + ++
Sbjct: 484 QDIIQLLNLIKD--DSFSELDPNDILTDDISDVDESQINLQQLDEKIQKQNAQINKAPQQ 541
Query: 569 DVVLRYTEGLCWVMHYYYE------------GVCSWQWFYPYHYAPFASDL--------- 607
D++ +Y E M + + G W+W+YPYHYAP SD+
Sbjct: 542 DLIEKYMEMNMEFMKKFIKLYKIDPFSAKAIGAQHWRWYYPYHYAPMISDIDEDIVENYL 601
Query: 608 ---KDLDQFNISFELGH---PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
K + F I H P++PF QLL + P+ S LP+ Y +++ + ++P
Sbjct: 602 KGSKVIGDFEIDENCSHINEPYRPFFQLLCILPAKSVKLLPQQYSEIIL---GVLRKYFP 658
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
DF +D+NG+ W+ + +PF++E+ +
Sbjct: 659 DDFTIDLNGRSLPWEAVCLIPFVEESLFI 687
>gi|145505349|ref|XP_001438641.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405813|emb|CAK71244.1| unnamed protein product [Paramecium tetraurelia]
Length = 773
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 278/449 (61%), Gaps = 31/449 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL + P + +V+E D S + N + DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLCARNPKALLEVLENS-----------DESSLS-NNPDIDNLYLDMNGIIH 48
Query: 61 PCFHPEDR--PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC HP+ P P T+D++F +F YIDRL +VRP++L+YMAIDGVAPRAK+NQQRSRR
Sbjct: 49 PCSHPDQGGIPIPVTYDDMFVNVFHYIDRLVDIVRPKELIYMAIDGVAPRAKLNQQRSRR 108
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSD--SQVFDSNVITPGTEFMAVLSIALQY 176
FRA++++ E+ERLR + +G + + FDSN ITPGTEFM L+IALQY
Sbjct: 109 FRAAQESIRIQKEKERLRDYWRTQGLNSDALNTYIEKNFDSNQITPGTEFMQKLNIALQY 168
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
YI+ R+NN+P + + +I +D+++PGEGEHKI+ +VR QR Y RHCLYG DADL
Sbjct: 169 YIYDRMNNNPLFRNVLIIFNDSSIPGEGEHKILQFVRDQRRQMNY-KTVRHCLYGADADL 227
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML L+THE +F ++RE + +C +C Q GH +C+ + K+ ++ ++++
Sbjct: 228 IMLGLSTHEPYFYVIRETIMA-NDDKQCSICQQKGHFFTDCKKREKQYNQIQQQQKNKLI 286
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ +Q L + +RE+L +E R + DLE I+DDF+FMCF VGNDFLPH+P L
Sbjct: 287 --QVDFQILQLNIVREFLYFETRDLQASLKGQYDLERIIDDFVFMCFLVGNDFLPHIPCL 344
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
+I EG I+ L+ +YK +G YLT+ + +L+++ F+ VG ED + + + +
Sbjct: 345 KITEGGIDCLLIIYKTILSQIGDYLTNCGELNLQQMNQFLFHVGLIEDELIKGQEK---- 400
Query: 415 HAERIKREKAQARRGDDVEPLAQPDSLVP 443
K+E + RR + E Q + P
Sbjct: 401 -----KKEIVKNRRERNAEMKEQKVLMAP 424
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 147/279 (52%), Gaps = 28/279 (10%)
Query: 511 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 570
K K KL E+ + + D S ++ K +K+RYY+EKF K P + E + +
Sbjct: 440 KSALKDKLTEINQQEIDQAQSAKSSQELKKWKAVSYKQRYYQEKFGIK-PAQFNEFQHRI 498
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
+ Y E L W + YYY+G W WFYPYHYAPFA DL +LDQ F L PFKP+ QLL
Sbjct: 499 KISYLEALAWTLKYYYQGCVDWGWFYPYHYAPFAQDLTNLDQCLFEFSLNTPFKPYQQLL 558
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
V P S+ LP Y++LM + +SPI+DFYPTDF VD+ GK+++W G LPF+D RL+
Sbjct: 559 AVLPPQSAQFLPRPYQQLMLETSSPIADFYPTDFVVDLKGKKFAWLGEVVLPFVDADRLI 618
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN 750
+ I +L++ E R+ + ++F L H + +Q I+ +V+ R
Sbjct: 619 -KASNIGVSLSKLEQERDRLGQTLIFSLKKHE--------SFNFQQCHIQVQVDWLPRF- 668
Query: 751 PELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
P +SP+ +M +I NQ++
Sbjct: 669 -----------------PVGSEIKSPIPTMGNIFNNQII 690
>gi|237842105|ref|XP_002370350.1| exoribonuclease, putative [Toxoplasma gondii ME49]
gi|211968014|gb|EEB03210.1| exoribonuclease, putative [Toxoplasma gondii ME49]
Length = 1239
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/479 (42%), Positives = 267/479 (55%), Gaps = 58/479 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADV------------------------IEEEPVVIDGVKIPV 36
MGVP FYRWL +YP VV DV E+E DG +
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQE--N 58
Query: 37 DTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRK 96
+ ++ YD LYLDMNGIIHPC H +D P T +E+F +F Y+DR+ ++RPR+
Sbjct: 59 NDAETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQ 118
Query: 97 LLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFD 156
LLY+AIDGVAPRAKMNQQRSRRF+A+KD + LR +FE EGR++PPK +D
Sbjct: 119 LLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKK--MRWD 176
Query: 157 SNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQR 216
SNVITPGT FM L+ AL YYI RL + W+ ++VI SDA VPGEGEHKIM ++R QR
Sbjct: 177 SNVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQR 236
Query: 217 NLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAAN 276
+ PN RH L+G DADLIML LATHE +FSILRE V + C CG GH A N
Sbjct: 237 KSGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAEN 296
Query: 277 CEGKAKRKAG--------EFDEKGDEVVVPK--------------------KPYQFLHIW 308
C + +A E D++G + + KP Q L +
Sbjct: 297 CPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWATGLESHRRAWKPLQMLQLP 356
Query: 309 TLREYLDYEFRIPNPPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367
LREYL YEF + DLE +DDF+F+CF GNDFLPH+P I+ G+I+ L+ +
Sbjct: 357 VLREYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQL 416
Query: 368 Y-KKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQ 425
Y + + L YLT + +L + F+ + E + ++ + R ER +++K Q
Sbjct: 417 YLQLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEVVRRDLQRKSRMRERTEQQKQQ 475
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 141/278 (50%), Gaps = 53/278 (19%)
Query: 514 FKAKLKELLRDKSDAFNSDNPEEDKVKLG-----EPGWKERYYEEKFNAKTPEER---EE 565
FKAKL + L + D D +D+V G W+++YY +KF+ +R E+
Sbjct: 643 FKAKLSQKLNREIDG---DTLLKDEVDGGVGCPDRATWRQKYYRQKFHLPAESDRKDVEQ 699
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD-------LD------- 611
DV L Y GL WV+ YYY+G S+ WF+P+HYAP A DL D LD
Sbjct: 700 LASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQKEERE 759
Query: 612 ---------------------------QFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
F ISF LG PF+ F QL+ V P S+ LP
Sbjct: 760 RRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSASCLPRE 819
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+ +M +P S I+DFYP+D ++D NGKR+ WQ + LPFIDE RLL K +E LT EE
Sbjct: 820 HAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEE 879
Query: 705 ARRNSIMADMLFVLLSHPLSASIYTLD-EHCKQLKIKE 741
RN +D L+V SHPL+ ++ + EH + + + +
Sbjct: 880 RERNRRGSDRLYVHRSHPLARTLAEVSPEHGQGVTVHD 917
>gi|221482303|gb|EEE20658.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii GT1]
Length = 1239
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 202/479 (42%), Positives = 267/479 (55%), Gaps = 58/479 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADV------------------------IEEEPVVIDGVKIPV 36
MGVP FYRWL +YP VV DV E+E DG +
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQE--N 58
Query: 37 DTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRK 96
+ ++ YD LYLDMNGIIHPC H +D P T +E+F +F Y+DR+ ++RPR+
Sbjct: 59 NDAETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQ 118
Query: 97 LLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFD 156
LLY+AIDGVAPRAKMNQQRSRRF+A+KD + LR +FE EGR++PPK +D
Sbjct: 119 LLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKK--MRWD 176
Query: 157 SNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQR 216
SNVITPGT FM L+ AL YYI RL + W+ ++VI SDA VPGEGEHKIM ++R QR
Sbjct: 177 SNVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQR 236
Query: 217 NLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAAN 276
+ PN RH L+G DADLIML LATHE +FSILRE V + C CG GH A N
Sbjct: 237 KSGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAEN 296
Query: 277 CEGKAKRKAG--------EFDEKGDEVVVPK--------------------KPYQFLHIW 308
C + +A E D++G + + KP Q L +
Sbjct: 297 CPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWATGLESHRRAWKPLQMLQLP 356
Query: 309 TLREYLDYEFRIPNPPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367
LREYL YEF + DLE +DDF+F+CF GNDFLPH+P I+ G+I+ L+ +
Sbjct: 357 VLREYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQL 416
Query: 368 Y-KKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQ 425
Y + + L YLT + +L + F+ + E + ++ + R ER +++K Q
Sbjct: 417 YLQLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEVVRRDLQRKSRMRERTEQQKQQ 475
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 141/278 (50%), Gaps = 53/278 (19%)
Query: 514 FKAKLKELLRDKSDAFNSDNPEEDKVKLG-----EPGWKERYYEEKFNAKTPEER---EE 565
FKAKL + L + D D +D+V G W+++YY +KF+ +R E+
Sbjct: 643 FKAKLSQKLNREIDG---DTLLKDEVDGGVGCPDRATWRQKYYRQKFHLPAESDRKDVEQ 699
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD-------LD------- 611
DV L Y GL WV+ YYY+G S+ WF+P+HYAP A DL D LD
Sbjct: 700 LASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQKEERE 759
Query: 612 ---------------------------QFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
F ISF LG PF+ F QL+ V P S+ LP
Sbjct: 760 RRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSASCLPRE 819
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+ +M +P S I+DFYP+D ++D NGKR+ WQ + LPFIDE RLL K +E LT EE
Sbjct: 820 HAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEE 879
Query: 705 ARRNSIMADMLFVLLSHPLSASIYTLD-EHCKQLKIKE 741
RN +D L+V SHPL+ ++ + EH + + + +
Sbjct: 880 RERNRRGSDRLYVHRSHPLARTLAEVSPEHGQGVTVHD 917
>gi|221502801|gb|EEE28515.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 1239
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 202/479 (42%), Positives = 267/479 (55%), Gaps = 58/479 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADV------------------------IEEEPVVIDGVKIPV 36
MGVP FYRWL +YP VV DV E+E DG +
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQE--N 58
Query: 37 DTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRK 96
+ ++ YD LYLDMNGIIHPC H +D P T +E+F +F Y+DR+ ++RPR+
Sbjct: 59 NDAETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQ 118
Query: 97 LLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFD 156
LLY+AIDGVAPRAKMNQQRSRRF+A+KD + LR +FE EGR++PPK +D
Sbjct: 119 LLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKK--MRWD 176
Query: 157 SNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQR 216
SNVITPGT FM L+ AL YYI RL + W+ ++VI SDA VPGEGEHKIM ++R QR
Sbjct: 177 SNVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQR 236
Query: 217 NLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAAN 276
+ PN RH L+G DADLIML LATHE +FSILRE V + C CG GH A N
Sbjct: 237 KSGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSACGAVGHSAEN 296
Query: 277 CEGKAKRKAG--------EFDEKGDEVVVPK--------------------KPYQFLHIW 308
C + +A E D++G + + KP Q L +
Sbjct: 297 CPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWDTGLESHRRAWKPLQMLQLP 356
Query: 309 TLREYLDYEFRIPNPPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367
LREYL YEF + DLE +DDF+F+CF GNDFLPH+P I+ G+I+ L+ +
Sbjct: 357 VLREYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQL 416
Query: 368 Y-KKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQ 425
Y + + L YLT + +L + F+ + E + ++ + R ER +++K Q
Sbjct: 417 YLQLRPQVLTDYLTREGRVNLPELYTFLHHLAIVEKEVVRRDLQRKSRMRERTEQQKQQ 475
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 141/278 (50%), Gaps = 53/278 (19%)
Query: 514 FKAKLKELLRDKSDAFNSDNPEEDKVKLG-----EPGWKERYYEEKFNAKTPEER---EE 565
FKAKL + L + D D +D+V G W+++YY +KF+ +R E+
Sbjct: 643 FKAKLSQKLNREIDG---DTLLKDEVDGGVGCPDRATWRQKYYRQKFHLPAESDRKDVEQ 699
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD-------LD------- 611
DV L Y GL WV+ YYY+G S+ WF+P+HYAP A DL D LD
Sbjct: 700 LASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAPLAVDLADELQRRLKLDDQKEERE 759
Query: 612 ---------------------------QFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
F ISF LG PF+ F QL+ V P S+ LP
Sbjct: 760 RRGSALGSVQGLPRCGHSRGVSLGQDGNFEISFTLGTPFRAFEQLMAVLPPYSASCLPRE 819
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+ +M +P S I+DFYP+D ++D NGKR+ WQ + LPFIDE RLL K +E LT EE
Sbjct: 820 HAAVMMNPRSAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEE 879
Query: 705 ARRNSIMADMLFVLLSHPLSASIYTLD-EHCKQLKIKE 741
RN +D L+V SHPL+ ++ + EH + + + +
Sbjct: 880 RERNRRGSDRLYVHRSHPLARTLAEVSPEHGQGVTVHD 917
>gi|222622867|gb|EEE56999.1| hypothetical protein OsJ_06746 [Oryza sativa Japonica Group]
Length = 391
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 193/407 (47%), Positives = 244/407 (59%), Gaps = 95/407 (23%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P+FYRWL +YP +V+ P S+P + YDNLYLDMN IIH
Sbjct: 1 MGIPSFYRWLVNRYPSIVS---------------PAKESRPADGIVVYDNLYLDMNQIIH 45
Query: 61 PCFHPEDR-------PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
FHP+D+ APTT EVF+ MFDY+DRLF +VRPR+LLY+A+DGVAP AKMN
Sbjct: 46 YSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNG 105
Query: 114 QR----------SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPG 163
R SR+ + A+EEE ++ K V D NVITPG
Sbjct: 106 MRRGRPAEAIDRSRKRHPCFGSILQASEEEEMQ------------KISEGVSDPNVITPG 153
Query: 164 TEFMAVLSIALQYYIHLRLNN-DPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 222
TEFM +S AL YYI RLN+ DPGW+ I VILSDANVPGEGEHKIMS++R QR++ GYD
Sbjct: 154 TEFMEKISQALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYD 213
Query: 223 PNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK 282
PNTRHCL+G DADLIMLALA+HEVHFSILRE
Sbjct: 214 PNTRHCLFGHDADLIMLALASHEVHFSILRE----------------------------- 244
Query: 283 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 342
FL+IW LREYL+ E +I +P E D+E ++DDFIF+CF
Sbjct: 245 ---------------------FLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFL 283
Query: 343 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRR 389
+GNDF+PH+P+LE++E A++LL+ VYK F +GGY+ + K SL++
Sbjct: 284 MGNDFIPHIPSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKESLKK 330
>gi|336386148|gb|EGO27294.1| hypothetical protein SERLADRAFT_381861 [Serpula lacrymans var.
lacrymans S7.9]
Length = 318
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 169/329 (51%), Positives = 230/329 (69%), Gaps = 20/329 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-----GVKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP +V V EEE + +K+PV+ + PNPNG E+DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVQSVAEEEETEMPDAEGINIKVPVNMATPNPNGTEFDNLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HP+++PAP T +E+ +F Y +R+ MVRPRK+L+MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPDNKPAPETEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIAL 174
SRRFR++++A D E+E G+ + ++V +DSN ITPGT FM +L+++L
Sbjct: 121 SRRFRSAQEAKDKEEARREAVAEWEAMGKTISDDEKNKVAWDSNAITPGTPFMDLLALSL 180
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+Y++ ++N DPGW+ ++VI+SDA+VPGEGEHKIM ++R QR G+DPN+RH +YGLDA
Sbjct: 181 RYWVVQKMNTDPGWKDLQVIISDASVPGEGEHKIMDFIRRQRTNVGHDPNSRHVIYGLDA 240
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG---KAKRKAGEFDEK 291
DLIMLALATHE HF +LRE VF+ + C +CG+ GH AA C G + K+ E
Sbjct: 241 DLIMLALATHEPHFKVLREDVFSQDKGTGCRICGEEGHYAAQCTGVKTEIKKPPTE---- 296
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRI 320
KKP+ FL + LREYL+ E +
Sbjct: 297 -------KKPFIFLDVAILREYLEVELDV 318
>gi|303277183|ref|XP_003057885.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460542|gb|EEH57836.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 398
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 174/253 (68%), Positives = 199/253 (78%), Gaps = 8/253 (3%)
Query: 29 IDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRL 88
+DG PVD S PNPNG E+DNLYLDMNGIIHPCFHPEDRPAPTT +EVF+C+FDYIDRL
Sbjct: 1 MDGNTCPVDCSAPNPNGQEFDNLYLDMNGIIHPCFHPEDRPAPTTEEEVFECIFDYIDRL 60
Query: 89 FVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP 148
F M+RPRKLLYMAIDGVAPRAKMNQQRSRRFRA+++A + EEE+LR+ EG K+P
Sbjct: 61 FAMIRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAQEAQEKEEEEEKLRETLRAEGVKVPD 120
Query: 149 KSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKI 208
K S+ FDSNVITPGT FM LS ALQYY+H RLN DPGW +KVI+SDA+VPGEGEHK
Sbjct: 121 KVKSEAFDSNVITPGTPFMGRLSAALQYYVHQRLNTDPGWRGVKVIMSDASVPGEGEHKA 180
Query: 209 MSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVF--------TPGQ 260
M Y+R QR L G+DPNTRH +YGLDADLIMLALATHE +F ILREVVF P
Sbjct: 181 MHYIRQQRGLNGFDPNTRHVVYGLDADLIMLALATHEPNFHILREVVFQKNAPPPDVPST 240
Query: 261 QDKCFLCGQPGHL 273
+D+ G PG +
Sbjct: 241 RDQIMGEGAPGSM 253
>gi|159115185|ref|XP_001707816.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157435923|gb|EDO80142.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 902
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 201/452 (44%), Positives = 271/452 (59%), Gaps = 52/452 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEP----VVIDGVKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVP+F+RW+ ++Y V+ +VIE P IDG +P+ G DNLY D N
Sbjct: 1 MGVPSFFRWIVQRYGSVIDNVIEALPDTYEANIDGGALPL--------GFAIDNLYFDTN 52
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
G+IHPCFHPE RP P T EVF+ +F IDR+ + RPR+LLY+A+DG APRAK+NQQRS
Sbjct: 53 GLIHPCFHPEGRPQPETEAEVFEEIFQVIDRVVSICRPRRLLYLAVDGPAPRAKLNQQRS 112
Query: 117 RRFRASKD-AADSAAEEERL-------------RQEFEREGRKLPPKSDSQVFDSNVITP 162
RRF A+ + A+E RL + FE EG + +++ V DSN ITP
Sbjct: 113 RRFMAAYERQIKQRAQERRLMNMNLGDAEPSLKKLSFE-EGNAMDTSTEN-VLDSNAITP 170
Query: 163 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 222
GT FM+ LS+AL+YY+ R N W + V+ +DA PGEGEHKIMS+VR+QR+ PGYD
Sbjct: 171 GTPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRIQRSQPGYD 230
Query: 223 PNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCE---G 279
P T HC+YGLDADLIMLAL THE +F ILR+VV T + C C GHL + E G
Sbjct: 231 PCTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRC---GHLRVSSEYRTG 287
Query: 280 KAKRKAGEFDEKGD-----------EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEID 328
+++G V + P+QFLH+ LREYL EF + FE
Sbjct: 288 TVDPFTTRHEDQGGIDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDAADVIFER- 346
Query: 329 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALG-GYLTDGSKPSL 387
+DDF+F+ F VGNDFLPH+ L+IRE A+ ++ YK+ R+ G+LT GS ++
Sbjct: 347 ---AIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTTGSDVNM 403
Query: 388 RRVEHFIQAVGSYEDRIFQKRA--RLHQRHAE 417
+ F++ + E RIF+ RA +L+ RH++
Sbjct: 404 EDLHIFLKELAEQEARIFRARASGKLNARHSQ 435
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 538 KVKLGEPGWKERYYEE--------KFNAKTPEEREETRKDV---VLRYTEGLCWVMHYYY 586
K +L +PG+ +RYY + N ++ + E RK + Y +GL WV YY+
Sbjct: 495 KYELEKPGYAQRYYLGIGLMDDFPETNQESDTFKAELRKRIQTMCYHYIDGLIWVFRYYF 554
Query: 587 -EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-----PFKPFNQLLGVFPSASSHA 640
V W W+YPYH++P +DL Q H PF P+ QLL V P AS+
Sbjct: 555 LPKVEDWGWYYPYHHSPLLADLASASQTYTRTWKQHTVSNRPFNPYEQLLAVMPPASAAL 614
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP R LMTDP S ++ FYP+ + D++ K W+G+ LPFI+ + L+ +K L
Sbjct: 615 LPPVMRCLMTDPASILNKFYPSLIKCDLSEKTALWKGVLLLPFINSSELISAAQKSYDQL 674
Query: 701 TEEEARRNSIMADMLFVLLSHP 722
T E +RN + ++ + HP
Sbjct: 675 TPLEQQRNRLSDPIILIHKDHP 696
>gi|327408309|emb|CCA30120.1| GF20490, related [Neospora caninum Liverpool]
Length = 1253
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/494 (42%), Positives = 268/494 (54%), Gaps = 69/494 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADV-------------------------IEEEPVVIDGVKIP 35
MGVP FYRWL +YP VV DV E E
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGDNHVQDMREEIRQKRERERARQETKENEETSDRSAPAA 60
Query: 36 VDTSKPNPNGLE----YDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVM 91
+ K + LE YD LYLDMNGIIHPC H +D P T +E+F +F Y+DR+ +
Sbjct: 61 ENAEKTDQPDLEEEFGYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDI 120
Query: 92 VRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD 151
++PRKLLY+AIDGVAPRAKMNQQRSRRF+A+KD + E L+ +FE EGR++PPK
Sbjct: 121 IQPRKLLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYEELKAQFESEGREVPPKKI 180
Query: 152 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSY 211
+DSNVITPGT FM L+IA+ YYI RL W+ +KVI SDA VPGEGEHKIM +
Sbjct: 181 R--WDSNVITPGTPFMHRLAIAITYYIQDRLATRSSWQGLKVIFSDATVPGEGEHKIMDF 238
Query: 212 VRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPG 271
+R QR + PN RH L+G DADLIML LATHE +FSILRE V + C C G
Sbjct: 239 IRQQRKSGEFRPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQVCSTCNAVG 298
Query: 272 HLAANCEGKA-------------------KRKAG---EFDEKGDEV-----------VVP 298
H A NC+G + K G +E+G E+
Sbjct: 299 HSAENCKGGFAAGAPAATPEEERAFQVLEQDKRGLKRHLEERGVELREDWAAGLESHRRA 358
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPP-FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
KP Q L + LREYL YEF DLE +DDF+F+CF GNDFLPH+P I+
Sbjct: 359 WKPLQMLQLPVLREYLTYEFITQQAEGHSYDLERCIDDFVFLCFLCGNDFLPHLPHQSIQ 418
Query: 358 EGAINLLMAVY-KKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF---QKRARLHQ 413
G+I+ L+ +Y + L YLT + +LR++ F+ + E + Q +A L
Sbjct: 419 RGSIDALVHLYLHLRPQVLTDYLTHEGRVNLRQLYTFLHHLAIVEKEVKDAEQGKAELSN 478
Query: 414 RHAERIKREKAQAR 427
+A R+ + + +AR
Sbjct: 479 ENAARLLKHQLEAR 492
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 152/316 (48%), Gaps = 64/316 (20%)
Query: 480 PHKVPRLSSGATIGAA-----IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP 534
PHK R S+G GA+ V A E E+ + FKAKL + L + D D
Sbjct: 598 PHKRRRGSAGDLSGASPGGILSVPAGKRRE----EDFDMFKAKLSQKLNREIDG---DTL 650
Query: 535 EEDKVKLG-----EPGWKERYYEEKFNAKTPEER---EETRKDVVLRYTEGLCWVMHYYY 586
+D+V G W+++YY +KF+ +R E DV L Y GL WV+ YYY
Sbjct: 651 LKDEVDGGVGCPDRSTWRQKYYRQKFHLPEESDRRDVETLASDVALAYIVGLQWVLLYYY 710
Query: 587 EGVCSWQWFYPYHYAPFASDLKD------------------------------------- 609
+G S+ WF+P+HYAP A DL D
Sbjct: 711 QGCNSFDWFFPFHYAPLAVDLADELQRRLKLDASKEETQRRDSSIGNARAAHSLKCTTSR 770
Query: 610 ---LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 666
++ ISF LG PF+ F QL+ V P S+ LP + +MT+P S I+DFYP D ++
Sbjct: 771 GVSIEGKQISFTLGMPFRAFEQLMAVLPPYSASCLPREHAAVMTNPRSAIADFYPADVKM 830
Query: 667 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSAS 726
D N + WQ + LPFIDE RLL K +E LT EE RN +D LFV SHPL+ +
Sbjct: 831 DPN---HQWQWVVLLPFIDENRLLRVCKPLEQFLTLEERERNRRGSDRLFVHRSHPLAET 887
Query: 727 IYTLD-EHCKQLKIKE 741
+ + EH + + + +
Sbjct: 888 LAGVTREHGQGVTVHD 903
>gi|308805328|ref|XP_003079976.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
gi|116058433|emb|CAL53622.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
Length = 1418
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/437 (45%), Positives = 253/437 (57%), Gaps = 64/437 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWLAE+YPL +++E I G +IP + DNLYLDMNG+IH
Sbjct: 74 MGVPKFFRWLAERYPL-----LQQE---IAGSQIP-----------KIDNLYLDMNGVIH 114
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H T DE+ +F Y+D LF M RP KLLYMAIDGVAPRAKMNQQRSRR
Sbjct: 115 NCSHGAGTDVNTRMSEDEMMSKVFAYLDHLFRMTRPNKLLYMAIDGVAPRAKMNQQRSRR 174
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR SA+E + R+E R G P+ + + FDSN ITPGTEFMA L+ L++Y+
Sbjct: 175 FR-------SASEAAKDREEARRRGE---PEPEGEPFDSNCITPGTEFMARLTEHLKFYV 224
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ DP W K+ VILS V GEGEHKIM ++R R PG++PN HCLYGLDADLIM
Sbjct: 225 RKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPGWEPNQTHCLYGLDADLIM 284
Query: 239 LALATHEVHFSILREVV-FTPGQQDKCFLCGQPGH-LAANCEGKAKRKAGEFDEKGDEVV 296
LAL THE HF +LREVV F G++ GQP + +N
Sbjct: 285 LALVTHEPHFCLLREVVKFGGGEK------GQPSREILSNPTDDG--------------- 323
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ LHI LREYLD EFR N F DLE ++DDFI +C VGNDFLP +PTL I
Sbjct: 324 -----FILLHIGLLREYLDLEFREKNLSFGYDLERVIDDFILLCMLVGNDFLPALPTLNI 378
Query: 357 REGAINLLMAVYKKEFRALGGYLT---DGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
EGA+N L VY LGGY+T G + R+E + + ++E ++ + RA +
Sbjct: 379 AEGALNTLFKVYHDTLPMLGGYITGDEGGGTFNAERLEKIMSIMSTFERQVLEDRALDVE 438
Query: 414 RHAERIKREKAQARRGD 430
+ E K+ + R GD
Sbjct: 439 KEEE--KKARRNKRFGD 453
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 101/169 (59%), Gaps = 4/169 (2%)
Query: 542 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
G WK++YY EK K E ++ Y +GL WV+ YYY GV SW W+YPYHYA
Sbjct: 503 GLQAWKDQYYREKLGLKMGEA--APLAEIRQAYFDGLNWVLRYYYRGVASWTWYYPYHYA 560
Query: 602 PFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
P ASDL +++ F+ G PF+PF QL+ V P +SS LPE +R M DP SP+++F+
Sbjct: 561 PMASDLCAGMEKLTSEFDYGEPFRPFEQLMAVQPPSSSKLLPEPFRHFMEDPRSPLAEFF 620
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT-LTEEEARRN 708
P D VD GKR W+G+ LPF+D RL V +E + LT E RN
Sbjct: 621 PEDIPVDFEGKRNDWEGVVLLPFLDADRLKAAVASVEDSQLTAGEIARN 669
>gi|390354472|ref|XP_786402.3| PREDICTED: 5'-3' exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 803
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 207/501 (41%), Positives = 283/501 (56%), Gaps = 43/501 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP + WL +K P ++ D EE+ +DG +IPV+T++ NPNG+E+DNLYLDMN II
Sbjct: 42 MGVPGLFMWLRKKCPSMIVDCEEEKAKHVDGKRIPVNTTQRNPNGVEFDNLYLDMNEIIV 101
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC +P ++PAP DE+ +F IDRL +VRPRKLLY+A DGVAPRAKM + RS RF
Sbjct: 102 PCCYPSNKPAPQNDDEIMCEIFLNIDRLVSIVRPRKLLYIAFDGVAPRAKMKKMRSSRFI 161
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
SK ++ +++ R E E GR LPPK PG FM + +YY+
Sbjct: 162 GSKIRRENREAQDKKRSEIEDSGRHLPPKRKETY-------PGKGFMFRQAEYFRYYVTE 214
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RLNNDPGW+ IKVILSDAN PGEGEHKIM Y+R QR P Y+P+T HC++G D +
Sbjct: 215 RLNNDPGWQGIKVILSDANTPGEGEHKIMDYIRKQRANPDYNPSTHHCVHGAD------S 268
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE++F+I+RE F P Q+ C LC Q H +C+G D +E
Sbjct: 269 LATHEMNFTIIRE-QFKPNQRRACELCYQEDHEMTDCQG--------LDAPPEE------ 313
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
EYL E + F + E ++DD++F+CFFVGNDFLPH+P+L IREGA
Sbjct: 314 --------RENEYLVNEL-LEGIHFHCNHERVIDDWVFLCFFVGNDFLPHLPSLNIREGA 364
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I++L+ +Y+K YLT+ +L+ V+ + +G ED F K+ R+ + E K
Sbjct: 365 IDILIRLYRKALHNTKDYLTENGVVNLKLVQQLMTDLGKEEDETF-KKWRVDELKNEETK 423
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHG-SRLAS--GPSPSPYQQSECVGRL-DNGKGT 476
A ++V+ SL+ V HG +R+ S + +P E RL + G
Sbjct: 424 IMPANPADAEEVD-TNDTVSLLLVDHQHGDARMPSRDNANKNPADAEEDTVRLWEEGWKK 482
Query: 477 SGRPHKVPRLSSGATIGAAIV 497
HK+ SS A V
Sbjct: 483 RYYQHKLKVASSDHDFRAQFV 503
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 141/249 (56%), Gaps = 21/249 (8%)
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 582
RD ++ N + EED V+L E GWK+RYY+ K K + R V RY EGLCW+
Sbjct: 458 RDNANK-NPADAEEDTVRLWEEGWKKRYYQHKL--KVASSDHDFRAQFVRRYIEGLCWLF 514
Query: 583 HYYYEGVCSWQWFYPYHYAPFASDL-----KDLDQFNISFELG-HPFKPFNQLLGVFPSA 636
YYY+G SW+W++PYHYAPFASD D+D +I+FE G P KP Q + V
Sbjct: 515 RYYYQGCASWKWYFPYHYAPFASDFLASDFPDIDDLSINFEKGTKPLKPLEQQMIV--GF 572
Query: 637 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
+ LPE + + MTD +SPI DFYP DF +D+NG +Y QG+A LPF+DE RLL + +
Sbjct: 573 NRRYLPETWSRKMTDDDSPIIDFYPEDFHIDLNGNKYPSQGVALLPFVDEDRLLRCLADV 632
Query: 697 EHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKE---RLNPEL 753
LT EE +RNS + LFV H L I KQL K R++ E ++ L
Sbjct: 633 YPDLTPEEKKRNSNGPERLFVDKHHRLYNFI-------KQLYKKNRLKKTEPDIDVHSSL 685
Query: 754 SDGMNGYIS 762
D M G I
Sbjct: 686 DDVMIGKIG 694
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 678 IAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQL 737
+A LPF+DE RLL + + LT E+ +RNS + LFV H L I L +
Sbjct: 713 VALLPFVDEDRLLRSLADVYPDLTPEDMKRNSNGPERLFVGKRHHLYNFINELYQKNSLE 772
Query: 738 KIKERVEVKERLNPELSDGMNGYIS 762
K + ++V+ P L D M G I
Sbjct: 773 KTEPDIDVR----PSLVDAMIGKIG 793
>gi|238593916|ref|XP_002393329.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
gi|215460659|gb|EEB94259.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
Length = 332
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 166/321 (51%), Positives = 227/321 (70%), Gaps = 9/321 (2%)
Query: 91 MVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLR--QEFEREGRKLPP 148
MVRPRKLL+MAIDGVAPRAKMNQQRSRRFRA+++A + EE RL + +E G+ +
Sbjct: 1 MVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAQEAKEK--EEARLESVRLWEEMGKTISE 58
Query: 149 -KSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHK 207
+ + + +DSN ITPGT FM +L+ +L+Y++ ++N+DPGW+ ++VI+SDA+VPGEGEHK
Sbjct: 59 DEKNKKAWDSNAITPGTPFMTLLAASLRYWVVQKMNSDPGWKNLQVIISDASVPGEGEHK 118
Query: 208 IMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLC 267
IM Y+R QR PG+DPNTRH +YGLDADLIMLALATHE +F +LRE VF+ C +C
Sbjct: 119 IMDYIRRQRTNPGHDPNTRHVIYGLDADLIMLALATHEPYFRVLREDVFSDSSNMACRMC 178
Query: 268 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI 327
GQ GH AA C E E+ + V +KP+ FL + LREYL+ E +P PF
Sbjct: 179 GQEGHYAAQCTA----TPAEVQERAKKKVTERKPFIFLDVSILREYLEAELNVPQTPFPF 234
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 387
+LE +DD++ + FFVGN FLPH+P+LEIREGAI+ L+ ++K E +GGYLT+ + L
Sbjct: 235 NLEQAIDDWVLLIFFVGNAFLPHLPSLEIREGAIDTLLRIWKMELPRMGGYLTNHGRLEL 294
Query: 388 RRVEHFIQAVGSYEDRIFQKR 408
R + ++ + ED IF++R
Sbjct: 295 ARAQIILEGLAKREDDIFKRR 315
>gi|154285288|ref|XP_001543439.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407080|gb|EDN02621.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1327
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 217/596 (36%), Positives = 311/596 (52%), Gaps = 67/596 (11%)
Query: 153 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 212
+ FDSN ITPGTEFMA L+ L+Y+I+ +++ D W+ ++++LS VPGEGEHKIM Y+
Sbjct: 5 EAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYI 64
Query: 213 RLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGH 272
R + PGY P+ RHCLYGLDADLIML L +H+ HF +LRE V T G+Q
Sbjct: 65 RQSKAQPGYQPDIRHCLYGLDADLIMLGLLSHDPHFCLLREEV-TFGRQ----------- 112
Query: 273 LAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEID 328
+++K+ E + + + +H+ +REYL+ EF+ F D
Sbjct: 113 --------SQKKSKELEHQN---------FYLMHLCMVREYLELEFQELEEENALQFPFD 155
Query: 329 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 388
LE ++DDFI M FFVGNDFLP++P L I EGA+ + VYK+ LGGY+ + +L
Sbjct: 156 LERVIDDFILMAFFVGNDFLPNLPNLHINEGALAWMFKVYKQVLPKLGGYINEQGTINLE 215
Query: 389 RVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVSR 446
R+ + ++ E R F+ + R + K + + EP A ++ P +
Sbjct: 216 RLGVLLDSLSDVEFRFFEA-----EFSDARWIKSKMKGEELESSEPPANAKDFAISPAQK 270
Query: 447 FHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHK-VPRLSSGATIGAAIVEAEN---- 501
+R+ + P LD R K V +L+ + V E+
Sbjct: 271 HVFNRIKKYVTHRPVNDQGQFVPLDLSPNLPARDRKFVEQLADDLHLAWTTVSNEHGDRF 330
Query: 502 ------SFETDP--------QENKEEFKAKLKELLR------DKSDAFNSDNPEEDKVKL 541
S ET +N+E A L + R ++ A + E K +L
Sbjct: 331 LRVQLPSKETQTSGSSGDDDGDNEEGQIALLLVMKRYENAKVKETTAEEAQQAAEKKYEL 390
Query: 542 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
WK YY+ KF + EE R+ + Y +GL WV++YYY GV SW WFY YHY+
Sbjct: 391 KFQEWKNNYYKSKFGWDM-DNHEEMRQ-LTENYVQGLQWVLYYYYRGVASWPWFYQYHYS 448
Query: 602 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
P SD+K + +++F+LG PF PF QL+GV P S +P + +LMT P SPI DFYP
Sbjct: 449 PMISDVKLGLEADMNFDLGQPFHPFEQLMGVLPDRSKQIVPSAFHELMTSPESPIIDFYP 508
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFE+DMNGK+ W+ + K+PFIDE RLL + +H LT EE RN + F
Sbjct: 509 RDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEENARNEFGVTLKFT 564
>gi|308160579|gb|EFO63060.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 900
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/448 (43%), Positives = 261/448 (58%), Gaps = 46/448 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEP----VVIDGVKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVP+F+RW+ ++Y V+ +VIE P IDG +P+ G DNLY D N
Sbjct: 1 MGVPSFFRWIVQRYSSVIDNVIEALPDTYEANIDGGALPL--------GFAIDNLYFDTN 52
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
G+IHPCFHPE RP P T EVF+ +F IDR+ + RPR+LLY+A+DG APRAK+NQQRS
Sbjct: 53 GLIHPCFHPEGRPQPETEAEVFEEIFQVIDRVVSVCRPRRLLYLAVDGPAPRAKLNQQRS 112
Query: 117 RRFRASKDAADSAAEEERLR----------QEFEREGRKLPPKSDSQVFDSNVITPGTEF 166
RRF A+ + +ER ++ E K DSN ITPGT F
Sbjct: 113 RRFMAAYERQIKQRAQERRHMNLGDTEPSLKKLGFEENKAMDTFTENALDSNAITPGTPF 172
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
M+ LS+AL+YY+ R N W + V+ +DA PGEGEHKIMS+VR+QR+ PGYDP T
Sbjct: 173 MSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRIQRSQPGYDPCTV 232
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCE---GKAKR 283
HC+YGLDADLIMLAL THE +F ILR+VV T + C C GHL + E G
Sbjct: 233 HCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRC---GHLRVSSEYRTGTVDP 289
Query: 284 KAGEFDEKGD-----------EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECI 332
+++G V + P+QFLH+ LREYL EF + FE
Sbjct: 290 FTTRHEDQGGIDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDAADVVFERS---- 345
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALG-GYLTDGSKPSLRRVE 391
+DDF+F+ F VGNDFLPH+ L+IRE A+ ++ YK+ R+ G+LT GS ++
Sbjct: 346 IDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSKKIGFLTTGSDVNMNDFH 405
Query: 392 HFIQAVGSYEDRIFQKRA--RLHQRHAE 417
++ + E RIF+ RA +L+ RH++
Sbjct: 406 ILLKELAEQESRIFKARASGKLNTRHSQ 433
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 538 KVKLGEPGWKERYY-----EEKFNAKTPEE---REETRKDV---VLRYTEGLCWVMHYYY 586
K +L +PG+ +RYY + F E + E RK + Y +GL WV YY+
Sbjct: 493 KYELEKPGYAQRYYLGIGLMDDFQETDQESDIFKTELRKRIQTMCYHYIDGLIWVFRYYF 552
Query: 587 -EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-----PFKPFNQLLGVFPSASSHA 640
V W W+YPYH++P DL Q H PF P+ QLL V P AS+
Sbjct: 553 LPKVEDWGWYYPYHHSPLLVDLASASQTYTRTWKQHTMSNRPFNPYEQLLAVMPPASATL 612
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP R LMTDP S ++ FYP+ + D++ K W+G+ LPFI+ + L+ +K L
Sbjct: 613 LPPVMRCLMTDPASILNKFYPSLIKCDLSEKTALWKGVLLLPFINSSELVSAAQKSYGQL 672
Query: 701 TEEEARRNSIMADMLFVLLSHP 722
T E +RN + ++ + HP
Sbjct: 673 TPLEQQRNRLSDPVVLIHKDHP 694
>gi|449532153|ref|XP_004173047.1| PREDICTED: 5'-3' exoribonuclease 3-like, partial [Cucumis sativus]
Length = 249
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/251 (71%), Positives = 203/251 (80%), Gaps = 18/251 (7%)
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
GAINLL+AVYKKEFRALGGYLTDGSKP+L+RVEHFIQAVGSYED+IFQKRARLHQ+ A+R
Sbjct: 1 GAINLLLAVYKKEFRALGGYLTDGSKPNLQRVEHFIQAVGSYEDKIFQKRARLHQKQADR 60
Query: 419 IKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRL-------- 470
IKREK Q RRGDD EP QP SLV V+RFH SRLASGP PSPY++S VG+
Sbjct: 61 IKREKGQTRRGDDAEPQVQP-SLVAVARFHESRLASGPCPSPYERS-GVGKATSRFSGMN 118
Query: 471 --------DNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 522
+G GTS R +KV RLSSGA+IGAAIVEAENS E D +NK+E K+KLKE+L
Sbjct: 119 IKNKQSLESHGSGTSVRQNKVARLSSGASIGAAIVEAENSLEIDIDDNKKELKSKLKEVL 178
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVM 582
R+KSD FNS+ EEDK+KLG PGW+ERYY EKF+A TPEE ++ R DVVLRYTEGLCWVM
Sbjct: 179 REKSDVFNSNKSEEDKIKLGVPGWRERYYNEKFSANTPEELDDIRNDVVLRYTEGLCWVM 238
Query: 583 HYYYEGVCSWQ 593
HYYYEGVCSWQ
Sbjct: 239 HYYYEGVCSWQ 249
>gi|342184282|emb|CCC93763.1| putative 5'-3' exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 785
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 237/700 (33%), Positives = 337/700 (48%), Gaps = 124/700 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEP--VVID---GVKIPVDTSKPNPNGLEYDNLYLDM 55
MG+ FY WL Y A IE P VV D G+ P D +K G +DNLYLDM
Sbjct: 1 MGIAGFYLWLKRWY----ATCIENIPMDVVSDAMRGIGHPEDGAK----GPGFDNLYLDM 52
Query: 56 NGIIHPCFH-PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
NG++HPC H P P + +E+F+ +F +D +F +VRPRK L M +DGVAP++KMNQQ
Sbjct: 53 NGLVHPCCHDTAPLPEPASEEEMFERIFAQVDLVFKIVRPRKCLVMCVDGVAPQSKMNQQ 112
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RSRRFRA++++ +S E ++G LP +D NVITP T FM L +A+
Sbjct: 113 RSRRFRAAEESVESGRLSAECLAELRKKG--LPEPDIRPRWDHNVITPATPFMERLGLAV 170
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+++I +LN DP W KI V+ SDA+V GEGEHKIM Y+R R PGYDPNT H +YG+DA
Sbjct: 171 EWFILKKLNEDPAWGKIVVVFSDAHVAGEGEHKIMQYIRGLRVQPGYDPNTSHVIYGMDA 230
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLI L L THE + +ILR ++ D
Sbjct: 231 DLICLGLITHERNVTILR------------------------------------NQLTDS 254
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + HI RE L F + ++LE I+DDF+F+CFFVGNDFLPH+P +
Sbjct: 255 FQAAHNAFCYFHIAEYRECLRKSFLALS---GMNLERIIDDFVFLCFFVGNDFLPHIPLI 311
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA-VGSYEDRIFQKRARLHQ 413
++ + +L+ Y +E YLT+ + + + F++ V +Y +++ ++ A +
Sbjct: 312 SLKAKGLEMLLNHYVEEL-CNTSYLTNKGEVNFAVLPGFLERFVANYMNQLKREYAIMWG 370
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNG 473
R +A+ R + +E Q ++ V + L +
Sbjct: 371 ------MRSRAKCRVKESLE---QCNAGVKAA------------------------LGDL 397
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDN 533
K K+ + G + AA + + F + L SD D
Sbjct: 398 KPDRSNAQKISNVVYGLLLSAA-------------KERARFVGGKEPLGFSYSDENFRDK 444
Query: 534 PEEDKVKLGEPGW---KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
E K GW R +E+K E T+ V+RY Y G
Sbjct: 445 YYETKF-----GWDPSNRRKFEKKIARCCAEYYRGTQ--WVMRY----------YTVGCP 487
Query: 591 SWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 649
SW+WFYPY+YAP DL N+ LG P P QLL V P S LPE +
Sbjct: 488 SWEWFYPYYYAPLLEDLAAFSGTVNVEMHLGVPRHPVVQLLAVLPRLSVKGLPEPLHNAV 547
Query: 650 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
DP+S + +FYP +VD + +S+QG+ KLPFID +L
Sbjct: 548 LDPDSVLGEFYPDTIDVDHSEANFSYQGVLKLPFIDSEKL 587
>gi|148696568|gb|EDL28515.1| 5'-3' exoribonuclease 2, isoform CRA_c [Mus musculus]
Length = 725
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 201/498 (40%), Positives = 281/498 (56%), Gaps = 50/498 (10%)
Query: 271 GHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLE 330
GH +CEG + K G+ DE D + + + FL + LREYL+ E + + PF D+E
Sbjct: 44 GHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFPFDVE 103
Query: 331 CIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 390
+DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV
Sbjct: 104 RSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRV 163
Query: 391 EHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH-- 448
+ + AVG ED IF+KR R K ++ + +R +P P ++
Sbjct: 164 QMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPAFTPSGILTPHALGSR 220
Query: 449 ---GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFET 505
G ++AS P + Y+ ++ R SS + + SF +
Sbjct: 221 NSPGCQVASNPRQAAYEM------------------RMQRNSSPS------ISPNTSFAS 256
Query: 506 DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREE 565
D + L + R D+ + P ED V+L E GWK+RYY+ KF+ +E+
Sbjct: 257 DGS------PSPLGGIKRKAEDSDSEPEP-EDNVRLWEAGWKQRYYKNKFDVDAADEK-- 307
Query: 566 TRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFK 624
R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + + + FE G PFK
Sbjct: 308 FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFK 367
Query: 625 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 684
P QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+
Sbjct: 368 PLEQLMGVFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFV 427
Query: 685 DEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVE 744
DE RL ++++ LT EE RRNS+ D+LFV HPL I L Q E V+
Sbjct: 428 DERRLRAALEEVYPDLTPEENRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVD 483
Query: 745 VKERLNPELSDGMNGYIS 762
V PEL G+ G S
Sbjct: 484 VP----PELCHGIQGTFS 497
>gi|403331887|gb|EJY64917.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1130
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/448 (42%), Positives = 252/448 (56%), Gaps = 77/448 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV--VIDGVKIPVDTSK-PNP-------------- 43
MGVPAF+RWL+ +YP V + + +E + + D K D +K PN
Sbjct: 1 MGVPAFFRWLSVRYPKVAINALSDEDLEHLYDDFKKTSDDNKDPNEINLLDGDLDGEIEK 60
Query: 44 ----NGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLY 99
N E+DNLYLDMNGIIHPC HP+D+P PT+ E+F +FDY D++ +VRP++L+Y
Sbjct: 61 RVRENNPEFDNLYLDMNGIIHPCTHPQDKPQPTSETEMFNNIFDYTDKIMKIVRPQRLIY 120
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK-----SDSQV 154
MA+DGVAPRAKMNQQRSRRFR + D + EE +R ++ +EG K K DS
Sbjct: 121 MAVDGVAPRAKMNQQRSRRFRGALDTEEREQREEEIRGKWSKEGIKFSQKKDEEDGDSDK 180
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 214
FD NVITPGTEFM LS ALQYY+ RL D W+ IKVI SDA+ PGEGEHKI+ ++R
Sbjct: 181 FDQNVITPGTEFMFRLSKALQYYVMERLQTDSLWKDIKVIFSDASNPGEGEHKILDFIRS 240
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 274
QR GY+PNTRHC+YG DADLIML L+THE HF+ILRE V + KC CGQ GHL
Sbjct: 241 QRLQAGYNPNTRHCIYGADADLIMLGLSTHEPHFAILREAVLMDSDK-KCTYCGQNGHLN 299
Query: 275 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVD 334
+ C+ G P ++ +
Sbjct: 300 SECKSNPDIAGG------------------------------------PKVQLSRS---N 320
Query: 335 DFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI 394
DF LPH+P+L IREGA++ ++ +YK +LG YLT + +V+
Sbjct: 321 DF-----------LPHLPSLHIREGALDAILVIYKNLLPSLGDYLTKNGEIDFGKVDIIF 369
Query: 395 QAVGSYEDRIFQKRARLHQRHAERIKRE 422
+ E+ F+ + +R+AER+ R+
Sbjct: 370 NDIAKIEEESFKMKKENEERYAERLLRD 397
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 161/293 (54%), Gaps = 15/293 (5%)
Query: 504 ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKTPE 561
E D +E + K+KE+++ N + DKVK G GWK RYY++KF+ +
Sbjct: 505 ELDEEELNKLASDKMKEIVKKMLSEKNKQMADSYIDKVKFGTEGWKLRYYQDKFHIDVND 564
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
+E T K + Y EGL WV YYY+G SW WFYPYHYAPFASDL + D+ I FE+G
Sbjct: 565 FQEFTDK-IKQAYIEGLQWVYSYYYKGCVSWYWFYPYHYAPFASDLVNCDRVKIKFEMGV 623
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
P +PF QL+GV P S+H +P YR L++ P S I DFYP DF +D+NG RY+W G+ L
Sbjct: 624 PAQPFEQLMGVMPKQSAHCIPPCYRHLLSSPKSEIIDFYPIDFRLDINGARYAWMGVNLL 683
Query: 682 PFIDEARLLDEVKKIEH---TLTEEEARRNSIMADMLFVLLSHPLSASI-YTLDEHCK-Q 736
PFID RL+ ++K + LT E RN MLF + +++ TLD+
Sbjct: 684 PFIDRQRLIKAMRKADQDGAKLTPIEQDRNRTGTVMLFFARNEKSESALQQTLDKKLNGN 743
Query: 737 LKIKERVEVKERLNPELSDGMNGY-ISPCAGDPHPPVFRSPVASMEDIMGNQV 788
L++ + K++++ + N + I PH + M DI NQV
Sbjct: 744 LELFASFQRKDQISGTVKVLKNAHQIGQKISRPHVKL------QMSDITDNQV 790
>gi|253743695|gb|EET00027.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 900
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 198/473 (41%), Positives = 269/473 (56%), Gaps = 54/473 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEP----VVIDGVKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVP+F+RW+ ++Y V+ +V+E P IDG +P+ G DNLY D N
Sbjct: 1 MGVPSFFRWIVQRYSSVIDNVLEAFPDTYEANIDGDALPL--------GFAIDNLYFDTN 52
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
G+IHPCFHPE R P T EVF+ +F +DR+ + RPR+LLY+A+DG APRAK+NQQRS
Sbjct: 53 GLIHPCFHPEGRAQPQTEAEVFEEIFQVLDRVVSICRPRRLLYLAVDGPAPRAKLNQQRS 112
Query: 117 RRFRASKDAADSAAEEERLRQEF-------EREGRKLPPKSDSQV---FDSNVITPGTEF 166
RRF A+ + +ER F ++ G ++ ++S DSN ITPGT F
Sbjct: 113 RRFMAAYERQIKERVQERRLMSFGDVEPSLKKLGSEMNDATESTAQTNLDSNAITPGTPF 172
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
M+ LS+AL+YY+ R N W + V+ +DA PGEGEHKIMS+VR+QR+ PGYDP T
Sbjct: 173 MSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRVQRSQPGYDPCTI 232
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
HC+YGLDADLIMLAL THE +F ILR+VV T + C CG + + G
Sbjct: 233 HCIYGLDADLIMLALGTHEPNFLILRDVVDTANLKRTCTRCGHLRISSEHNTGTVDPFTT 292
Query: 287 EFDEKGD-----------EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDD 335
+++G V + P+QFLH+ LREYL EF + F E +DD
Sbjct: 293 RHEDQGGMDCPFYPGSSLRPVAFRSPFQFLHVSRLREYLQREFDATDVIF----ERAIDD 348
Query: 336 FIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALG-GYLTDGSKPSLRRVEHFI 394
F+F+ F VGNDFLPH+ L+IRE A+ ++ YK+ R+ G+LT GS ++ +
Sbjct: 349 FVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTTGSDVNIGDFHVLL 408
Query: 395 QAVGSYEDRIFQKRA--RLHQRHA--------------ERIKREKAQARRGDD 431
+ + E RIF+ RA + + RHA ER RE Q R DD
Sbjct: 409 RELAEQEARIFKARASGKANARHAQASETPDSKDETPGERAVREYFQFFRKDD 461
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 538 KVKLGEPGWKERYY----------EEKFNA-KTPEEREETRKDVVLRYTEGLCWVMHYYY 586
K +L +PG+ +RYY E+ + + K E ++ + + Y +GL WV YY+
Sbjct: 493 KYELEKPGYAQRYYLGIGLMDDFPEKNYESDKFKAELKQRIQTMCYHYIDGLIWVFRYYF 552
Query: 587 -EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH-----PFKPFNQLLGVFPSASSHA 640
V W W+YPYH++P DL Q H PF P+ QLL V P AS+
Sbjct: 553 LPKVEDWGWYYPYHHSPLLVDLAAASQTYTRTWKQHTVSNRPFNPYEQLLAVMPPASAAL 612
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP R LMTDP S ++ FYP+ + D++ K W+G+ LPFI+ + L+ +K L
Sbjct: 613 LPPVMRHLMTDPASDLNKFYPSLIKCDLSEKTALWKGVLLLPFINSSELISAAQKSYGQL 672
Query: 701 TEEEARRNSIMADMLFVLLSHP 722
T E +RN + ++ + HP
Sbjct: 673 TPLEQQRNRLSDPVILIHKDHP 694
>gi|409080083|gb|EKM80444.1| hypothetical protein AGABI1DRAFT_113625, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 315
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 228/325 (70%), Gaps = 21/325 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-----DGVKIPVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP ++ V EEE I D V +PV+ PNPNG+E+DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIIYPVEEEEESKIPDDNGDEVTVPVNMLLPNPNGVEFDNLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE +PAP T +E+ +F Y DR+ M+RPRKLL+MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFKYTDRVVNMIRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQE----FEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
SRRFR+S D A E+E RQE ++ G+++ + + +DSN ITPGT FM +L+
Sbjct: 121 SRRFRSSHD----AKEKEDARQESLKIWKAMGKEITEEEHKEAWDSNAITPGTPFMDLLA 176
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+L+Y++ ++N DP W+ I+V++SDA VPGEGEHKIM ++R QR+ PG+DPNT+H +YG
Sbjct: 177 TSLRYWVVQKMNTDPAWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQHVIYG 236
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQ-DKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
LDADLIMLALATHE +F +LRE VF + C +CGQ GH AA C G E ++
Sbjct: 237 LDADLIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTG----TKAEIEK 292
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLD 315
K KKP+ FL + LREYL+
Sbjct: 293 K---TPPDKKPFIFLDVAILREYLE 314
>gi|399215845|emb|CCF72533.1| unnamed protein product [Babesia microti strain RI]
Length = 803
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/416 (43%), Positives = 248/416 (59%), Gaps = 23/416 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRWL ++P V D+ + +G D+ YDNLYLDMNGI+H
Sbjct: 1 MGVPTFYRWLCSRFPKVPKDITNKANTSGEGDSHFTDSLFTE----RYDNLYLDMNGIVH 56
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P+ +E+F+ +FDYIDRL +RP++LLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 57 PCCHPEYLPQPSNEEEMFEAIFDYIDRLIETIRPKRLLYLALDGVAPRAKMNQQRSRRFK 116
Query: 121 A--SKDAADSAAEEERLRQE--FEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
A ++ A + ++ E + + +P +V+DSNVITPGT FM L + ++
Sbjct: 117 AVYEREYAQKQLQNDKSTPETNLSKSRQNIPQNEQQKVWDSNVITPGTPFMYQLGLEVEE 176
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
Y+ RL N W + VI+SD+N PGEGEHKI++++R QR YDPNTRH ++G+DADL
Sbjct: 177 YVSNRLENSDIWHNLTVIISDSNSPGEGEHKIINFIRTQRQSSNYDPNTRHVIHGMDADL 236
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IMLALATHE +F ILREVV P +Q F ++ E K K
Sbjct: 237 IMLALATHEPNFFILREVV--PFKQ---FNSTTQPTISDTSETVPSLKYSLMLRKS---- 287
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
K Q + I LREYL Y F+ DLE +DD + MCFF GNDFLPH+P++ I
Sbjct: 288 --WKQLQIIQIPVLREYLSYLFK----DCGCDLERCIDDLVLMCFFCGNDFLPHLPSMSI 341
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
G+I+ ++ +Y++ F LGGYLTD K ++ ++E F + + E + H
Sbjct: 342 TLGSIDQMIYLYQQIFPTLGGYLTDCGKINMPQLEMFTSYLTAVEHETLSLKGNNH 397
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 135/247 (54%), Gaps = 18/247 (7%)
Query: 486 LSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDK------- 538
L+ I +E S+ T + K R +A N N +E++
Sbjct: 364 LTDCGKINMPQLEMFTSYLTAVEHETLSLKGNNHGATRRAGNADNVTNNDEEETSKTGMI 423
Query: 539 -------VKLGEPG-WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
V LG P +K+ YY +K + + ++ +T + Y +G+ WV+ YYY+G+
Sbjct: 424 FTDLGIDVTLGSPEVYKKSYYIKKLDC-SEDDVAKTASAMAGEYVKGMEWVLEYYYQGIP 482
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SW W+YPYHYAPFASDLK Q N+ F+LG PF P QL+ V P SSH LPE + LM
Sbjct: 483 SWNWYYPYHYAPFASDLKFTTQ-NV-FQLGTPFTPLQQLMSVLPVQSSHCLPEKFADLMR 540
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
SPI+++YP ++D NG RY +Q +A LPFIDE LL VK +E L++EE RN +
Sbjct: 541 SEVSPIAEYYPRTLKLDPNGSRYRYQWVALLPFIDEQLLLATVKPLEEELSKEEKERNKL 600
Query: 711 MADMLFV 717
++ +FV
Sbjct: 601 KSEKIFV 607
>gi|426198151|gb|EKV48077.1| hypothetical protein AGABI2DRAFT_191725, partial [Agaricus bisporus
var. bisporus H97]
Length = 315
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 230/325 (70%), Gaps = 21/325 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI---DGVKI--PVDTSKPNPNGLEYDNLYLDM 55
MGVPA +RWL++KYP ++ V EEE I +GV++ PV+ PNPNG+E+DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIIYPVEEEEESKIPDDNGVEVTVPVNMLLPNPNGVEFDNLYLDM 60
Query: 56 NGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC HPE +PAP T +E+ +F Y DR+ M+RPRKLL+MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFKYTDRVVNMIRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKDAADSAAEEERLRQE----FEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
SRRFR+S D A E+E RQE ++ G+++ + + +DSN ITPGT FM +L+
Sbjct: 121 SRRFRSSHD----AKEKEDARQESIKIWKAMGKEITEEEHKEAWDSNAITPGTPFMDLLA 176
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
+L+Y++ ++N DP W+ I+V++SDA VPGEGEHKIM ++R QR+ PG+DPNT+H +YG
Sbjct: 177 TSLRYWVVQKMNTDPAWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQHVIYG 236
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQ-DKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
LDADLIMLALATHE +F +LRE VF + C +CGQ GH AA C G E ++
Sbjct: 237 LDADLIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTG----TKAEIEK 292
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLD 315
K KKP+ FL + LREYL+
Sbjct: 293 KTPP---DKKPFIFLDVAILREYLE 314
>gi|198417497|ref|XP_002120271.1| PREDICTED: similar to 5-3 exoribonuclease 1 [Ciona intestinalis]
Length = 665
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 249/409 (60%), Gaps = 60/409 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E ++P E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKE-------YQVP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +++F+ +F+YI+ LF ++RP++ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDDDPHFRITEEQIFKDIFNYIEVLFRIIRPQRTFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E ++Q ++ G LP + + FDSN ITPGT FM L L+Y++
Sbjct: 102 FRSAKEA------ENNIKQALQK-GEVLPTE---KRFDSNCITPGTSFMEKLQAQLEYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++ DP W+ IKV LS PGEGEHKIM ++R +R+ P YDPNTRHCLYGLDADL+M
Sbjct: 152 QNKITTDPSWQGIKVYLSGHQTPGEGEHKIMEFIRYERSQPEYDPNTRHCLYGLDADLLM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE HF++LRE V Q+ K + A
Sbjct: 212 LGLCTHEPHFALLREEVKFTRQKS----------------SKTQNAA------------- 242
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + LHI LREY+++EF PN PFE ++E I+DD++ M F VGNDF+PH+P L I
Sbjct: 243 QTTFHLLHISLLREYIEHEFEAPNLPFEFNIESIIDDWVLMGFLVGNDFIPHLPDLHIST 302
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
A+ L Y + LGGYL +G +L R+E +++A+ S++ F++
Sbjct: 303 SALPFLYQTYIQVLPTLGGYLNEGGVINLGRLEVYLKAISSFDMDHFEE 351
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 16/175 (9%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
K YY+ KFN + E+ T + Y G+ W+ HYYY GV SW WFYPYHY+P+ SD
Sbjct: 418 KRAYYQTKFNIEGTEDEIST---IAYEYILGIQWICHYYYNGVQSWDWFYPYHYSPYMSD 474
Query: 607 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 666
L ++ ++++ + PF PF QLL V P+AS +PE Y LM D +S I DFYP++F
Sbjct: 475 LCNISTLHLTYNMNQPFLPFQQLLAVLPAASKDCIPEPYWNLM-DESSIIGDFYPSNFST 533
Query: 667 DMNGKRYSWQGIAKLPFIDEA------------RLLDEVKKIEHTLTEEEARRNS 709
D+NGK+ W+ + ++PFI+E RLL ++ L+ + RRN+
Sbjct: 534 DLNGKQQEWEAVVQIPFIEEVTTNNSGCGVMEERLLSAMESCNSRLSASDKRRNT 588
>gi|147862841|emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/196 (80%), Positives = 173/196 (88%)
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYPYHYAPFASDLKDL Q NISFELG PFKPFNQLLGVFP+ASSHALPE YRKLMTDPN
Sbjct: 27 WFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPEEYRKLMTDPN 86
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI DFYPTDFEVDMNGKR++WQGIAKLPFIDEARLL EV+KIEHTLTEEE RRNS+M D
Sbjct: 87 SPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFD 146
Query: 714 MLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVF 773
MLFV LSHPLS I++LD+ CK+L ER EVKE+L+P S GMNGYIS C GDP PP+F
Sbjct: 147 MLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISLCGGDPCPPIF 206
Query: 774 RSPVASMEDIMGNQVL 789
RSP+AS+EDIM NQV+
Sbjct: 207 RSPIASLEDIMDNQVI 222
>gi|242067311|ref|XP_002448932.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
gi|241934775|gb|EES07920.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
Length = 712
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/370 (47%), Positives = 230/370 (62%), Gaps = 62/370 (16%)
Query: 71 PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAA 130
P T EVF+ +F+Y+DRLF +VRP +LLY+A+DGVAP AKMN+ R RF +++ A
Sbjct: 27 PMTVSEVFESLFEYMDRLFRIVRPTRLLYLAVDGVAPCAKMNRVRRGRFHSARMATSEEI 86
Query: 131 EEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEK 190
E+ +R+E +G++ P+ S+V D NVITPGTEFM LS AL+YYI R N+DP W
Sbjct: 87 EDYEMRKELRAQGKEETPQEISEVSDPNVITPGTEFMEKLSQALEYYIRGRFNSDPWWRD 146
Query: 191 IKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSI 250
I VILSDANVPGEGEHKIMS+VR Q N+ GYDPNTRHCL+G DADLIMLALA+HEVHFSI
Sbjct: 147 IMVILSDANVPGEGEHKIMSFVRAQGNMEGYDPNTRHCLFGHDADLIMLALASHEVHFSI 206
Query: 251 LREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTL 310
LRE FL+IW L
Sbjct: 207 LRE--------------------------------------------------FLNIWVL 216
Query: 311 REYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
REYL+ EF+I +P E D+E ++DDFIF+CF +GNDF+PH+P+LE EGA++LL+ VYK
Sbjct: 217 REYLEIEFKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPSLETHEGAVDLLIEVYKT 276
Query: 371 EFRALGGYLT--------DGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ----RHAER 418
F +GGY+ +G+ + R+E F + YE++IF KR +L Q +
Sbjct: 277 TFNKMGGYIINTDKVKDKNGAYLEVSRLEIFFHELSMYEEKIFLKRYKLEQDLLLKTYHE 336
Query: 419 IKREKAQARR 428
+ RE +++ R
Sbjct: 337 MLREASESER 346
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 18/202 (8%)
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 567
+ + E + KL +LL FN + P D+++LG PGWK R++ E F A+T E + +
Sbjct: 343 ESERPELRQKLDDLL------FNEERPY-DRIRLGLPGWKSRFFREYFGAETSNEIGKLQ 395
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
D+ +Y EGLCWV+ Y+ V SW W+YP++ APF SDLK L + +ISF + P +PF+
Sbjct: 396 NDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRVDISFTVDKPLRPFD 455
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+ V P S ALP+ Y+++M +F E D G+ + W GI+ E
Sbjct: 456 QLMAVLPMQSWCALPKCYKEMMGR-----KEFDYPRLEHDTKGRHFLWNGIS------EE 504
Query: 688 RLLDEVKKIEHTLTEEEARRNS 709
LL K ++ LT E+RRN+
Sbjct: 505 LLLSATKVVDKKLTTHESRRNT 526
>gi|328850703|gb|EGF99864.1| hypothetical protein MELLADRAFT_68240 [Melampsora larici-populina
98AG31]
Length = 406
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/300 (55%), Positives = 220/300 (73%), Gaps = 16/300 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV--VIDG--VKIPVDTSKPNPNGLEYDNLYLDMN 56
MGVPA +RWL++KYP +V VIE+ P+ ++G + P+D SK NPNG+E+D MN
Sbjct: 1 MGVPALFRWLSKKYPKIVEQVIEDVPIRTEVEGGYEETPLDMSKRNPNGVEFD-----MN 55
Query: 57 GIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
GI+HPC HPE + P T +E+ +F Y +R+ MVRPRKLL +AIDGVAPRAKMNQQRS
Sbjct: 56 GIVHPCTHPEGKKPPETEEEMMIEVFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQQRS 115
Query: 117 RRFRASKDAADSAAEEERLR--QEFEREGRKLPP--KSDSQVFDSNVITPGTEFMAVLSI 172
RRFRA+++A EE +L +E++ G++L KSD + +DSN ITPGT FM +L+
Sbjct: 116 RRFRAAQEA--QTKEEAKLAAIEEWKTMGKELSEEFKSDKKAWDSNAITPGTPFMTLLTE 173
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
+L+Y+I ++N DPGW++I+VILSDA+VPGEGEHKIM ++R QR YDPNT H +YGL
Sbjct: 174 SLRYWIVHKMNTDPGWKQIQVILSDASVPGEGEHKIMDFIRRQRTHSSYDPNTSHVIYGL 233
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML+LATHE HF +LRE VF ++ + C+ CGQPGH ++ C+GK K KA EFD K
Sbjct: 234 DADLIMLSLATHEPHFKVLREDVFADQKKGRGCYTCGQPGHHSSQCQGKPKEKADEFDIK 293
>gi|403414808|emb|CCM01508.1| predicted protein [Fibroporia radiculosa]
Length = 1961
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 183/411 (44%), Positives = 244/411 (59%), Gaps = 62/411 (15%)
Query: 3 VPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPC 62
+P F+R+++E+YPL + +I+E KIP E+DNLY+D NGIIH C
Sbjct: 17 IPKFFRYISERYPLT-SQLIQEN-------KIP-----------EFDNLYVDFNGIIHNC 57
Query: 63 FHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
HP D A E +F +F Y+D LF ++P+KL +MAIDGVAPRAKMNQQRSRRFR
Sbjct: 58 SHPNDGDAHFRLSEEQIFTSIFAYVDHLFGKIKPKKLFFMAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+K+A + +R++ E +G KLP D++ FDSN ITPGTEFMA LS LQY+++
Sbjct: 118 TAKEARE-------VREKAESKGEKLP---DTKAFDSNCITPGTEFMAKLSAQLQYFVNK 167
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+++ D W + V+LS +VPGEGEHKIM Y+RL R P YDPN RHCLYGLDADLIML
Sbjct: 168 KISEDANWSDVTVVLSGHDVPGEGEHKIMEYIRLSRAQPDYDPNVRHCLYGLDADLIMLG 227
Query: 241 LATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L +H+ HF +LRE V F P + K G +A+ E
Sbjct: 228 LLSHDPHFCLLREEVKFGPASRSK-------GSKSASLESIN------------------ 262
Query: 300 KPYQFLHIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ LH+ +REYLD EF P PF LE I+DDFI + FVGNDFLP++P L I
Sbjct: 263 --FYLLHLTLMREYLDLEFFHDIEPVLPFSYSLEHIIDDFILLAVFVGNDFLPNLPDLHI 320
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
E + L VYKK +L GYL + + +R++ + + +E IF+K
Sbjct: 321 HENGLEKLFDVYKKSLPSLDGYLNESGVINTKRLQVILDEMAEWEREIFEK 371
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 124/206 (60%), Gaps = 20/206 (9%)
Query: 515 KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRY 574
KAK+ E DK F++ K K+ E WK YY+ +A D+ ++
Sbjct: 528 KAKVAE--DDKEGDFDARYEMSIKDKMDE--WKRNYYKACPSAS----------DIWMQ- 572
Query: 575 TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
WVMHYYY GV SW WFY YHYAP SDLK +DQ + F+LG PF+PF QL+GV P
Sbjct: 573 -----WVMHYYYSGVASWSWFYNYHYAPRISDLKGVDQMSFQFDLGTPFRPFEQLMGVLP 627
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
AS +P YR+LM D NSPI DFYP +FE+D+NGK+ W+ I K+PFID+ RLL ++
Sbjct: 628 EASKELIPPAYRELMFDVNSPILDFYPQEFELDLNGKKQDWEAIVKIPFIDQDRLLSAMR 687
Query: 695 KIEHTLTEEEARRNSIMADMLFVLLS 720
EH LT++E RN+ + M F S
Sbjct: 688 SREHRLTKDERHRNAFGSSMKFFFHS 713
>gi|443895364|dbj|GAC72710.1| predicted hydrolases or acyltransferases [Pseudozyma antarctica
T-34]
Length = 1939
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/412 (43%), Positives = 245/412 (59%), Gaps = 65/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E+YPL+ + +IEE KIP E+DNLYLDMNGIIH
Sbjct: 150 MGIPKFFRFMSERYPLI-SQLIEEN-------KIP-----------EFDNLYLDMNGIIH 190
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D A T ++F +F YI+ LF ++P+K+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 191 NCSHPNDNDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRR 250
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +K+A + ++++ ER G LP D + FDSN ITPGT FMA LS L+Y+I
Sbjct: 251 FRTAKEA-------KEIKEKAERRGEILP---DEEAFDSNCITPGTPFMAKLSQQLEYFI 300
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++ D W ++VILS +VPGEGEHKIM Y+RL + PGY+PN RHCLYGLDADLIM
Sbjct: 301 AKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLCKAQPGYNPNVRHCLYGLDADLIM 360
Query: 239 LALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L +H+ HF +LRE V F P ++ K L Q
Sbjct: 361 LGLLSHDPHFCLLREEVQFGPRRKSKGSLESQN--------------------------- 393
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ LH+ REYLD EF+ + PF + E I+DDFI + FVGNDFLPH+P L
Sbjct: 394 ----FFLLHLSLFREYLDLEFQDLRSSLPFPYEFERIIDDFILLNIFVGNDFLPHLPGLH 449
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I EGA++LL +YK+ GGYL + R+E + + ++E F++
Sbjct: 450 INEGAMDLLFGIYKQILPVAGGYLNESGHLRTDRLELVLAELRNFEMEQFER 501
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 127/197 (64%), Gaps = 7/197 (3%)
Query: 518 LKELLRDKSDAFNSDN--PEED---KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 572
L L+ K D + D+ PEED ++ WK+ YY++K + +E +
Sbjct: 666 LGRYLKAKVDTASDDDVDPEEDYRKRLDAQMTEWKKDYYKQKL--EFDYSNDEAMSKLAF 723
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 632
RY EGL WV+HYYY+GV SW WFY YHYAP SDLK++ Q FELG PF+PF+QL+GV
Sbjct: 724 RYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLKNVGQMKFEFELGKPFRPFDQLMGV 783
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
P+ S+ +P +R LMTDPNSPI DFYP++FE D+NGK+ W+ + K+PFIDE RLL+
Sbjct: 784 LPALSNQHIPTAFRDLMTDPNSPIIDFYPSNFEADLNGKKQDWEAVVKIPFIDEKRLLEA 843
Query: 693 VKKIEHTLTEEEARRNS 709
+ K E L EE +RN
Sbjct: 844 LDKREVYLGIEERKRNG 860
>gi|156085645|ref|XP_001610232.1| 5'-3' exoribonuclease (XRN2) [Babesia bovis T2Bo]
gi|154797484|gb|EDO06664.1| 5'-3' exoribonuclease (XRN2), putative [Babesia bovis]
Length = 1388
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 234/753 (31%), Positives = 339/753 (45%), Gaps = 175/753 (23%)
Query: 1 MGVPAFYRWLAEKYPLVV----ADVIEEEPV--VIDGVKIPVDTSKPN--PNGLEYDNLY 52
MGVP F++WLA++YPL+ V E++ ++ ++ D + + P+G +DNLY
Sbjct: 1 MGVPGFFKWLAQRYPLICETYRGSVAEKDDAFRLLKSIERSDDQYETSSVPDG--FDNLY 58
Query: 53 LDMNGIIHPCFHP--EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAK 110
LD+NGIIH C H E +++F +F YI+ L +VRPRKLLY+AIDGVAPRAK
Sbjct: 59 LDVNGIIHNCSHSIEELSQGLRCEEDIFVLIFQYINNLVKIVRPRKLLYLAIDGVAPRAK 118
Query: 111 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFM 167
+ QQR RRFR+++D+ + + +++ E K P D V FD ITPGT FM
Sbjct: 119 IMQQRDRRFRSARDSNKNEVVFQTIQENNGIE--KEPSDGDGDVNFKFDPIQITPGTPFM 176
Query: 168 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRN-------LPG 220
LS+ L+++ H+ ++ + W+ +K+++S ++VPGEGEHKIM Y+R ++ G
Sbjct: 177 ERLSVRLRFFAHMMIHENKAWKNLKIVVSGSDVPGEGEHKIMEYIRNDKSNRHDAARAGG 236
Query: 221 YDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK 280
HC+YGLDADLIML+LATHE + +LRE V+ +Q
Sbjct: 237 TPQYISHCIYGLDADLIMLSLATHEPYVCLLREQVYFFNKQ------------------- 277
Query: 281 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEIDLECIVDDF 336
+++ Y FLHI LREY+ ++ I P ID +VDDF
Sbjct: 278 ----------TNSRMMMNMNDYIFLHIGILREYILHDMVISPELRRQPRTIDR--VVDDF 325
Query: 337 IFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 396
+ M F+GNDFLPH +I +G +N + +Y + YL + + S +
Sbjct: 326 VLMSMFMGNDFLPHGKFAKITDGGLNTYITLYSR-------YLEERYRSSPNGHIWLVTG 378
Query: 397 VGSYE-DRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG 455
G + L +R + RI E L G
Sbjct: 379 CGEINCTNLLHFLNMLVKRESSRITDE-----------------------------LHCG 409
Query: 456 PSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFK 515
P D G+G + R K SG T I A TDP E + +++
Sbjct: 410 P--------------DAGRGEAKRNGK-----SGKTEITVIDVANCCIMTDPSEFRAKYE 450
Query: 516 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT------------PEER 563
K K W+ RYY K + E
Sbjct: 451 GKPKSFAE----------------------WRSRYYMAKMGIASDVIVHKSTKSSDTESS 488
Query: 564 EETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ----------- 612
T +VV Y EG+ WVM+YYY GV SW W+ YAP SD++ Q
Sbjct: 489 PCTIPEVVRDYLEGIQWVMYYYYRGVPSWNWYLRCKYAPLLSDVRFFIQRMKQSYDRGGN 548
Query: 613 ---------------FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
+ FE+ P PF QL+ V P A++H LP + LMTD SP+
Sbjct: 549 RPRDCPANATTLSQVMQLKFEISEPVTPFQQLMMVMPPAAAHFLPTVFGNLMTDTESPLR 608
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
+YP F++DM+ W G+ LP + LL
Sbjct: 609 KYYPEHFDIDMDDTNVQWGGVTLLPIVPPNLLL 641
>gi|118388580|ref|XP_001027386.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89309156|gb|EAS07144.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1793
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 229/751 (30%), Positives = 360/751 (47%), Gaps = 103/751 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FY WLA +YPL++ + + E PN D YLDMNGII+
Sbjct: 1 MGVPGFYSWLARRYPLILHQIKKGEV----------------PN---IDCFYLDMNGIIY 41
Query: 61 PCFHPE-----DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
C E D E+F +F+YID + +V P+K+LY+ +DG PRAK NQQR
Sbjct: 42 KCSKDEGTVFKDLLLQRNIQEIFSMIFNYIDEMVNLVEPKKVLYLFLDGPCPRAKQNQQR 101
Query: 116 SRRFRAS---KDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
+RRF+++ KD DS R S+ + +N I+ GTEFM L+
Sbjct: 102 TRRFQSAQSWKDLNDSL--------------RNCGFLSEGETMKNNSISTGTEFMHDLNK 147
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L +YI + DP W ++V S +NVPGEGEHKI++++ + YDP T HC+YG
Sbjct: 148 QLHFYICKKFEQDPRWSNLEVFFSGSNVPGEGEHKIINFMHQYCSSQDYDPTTTHCIYGA 207
Query: 233 DADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML L+TH + SILR E+ F P P AA K R++ F
Sbjct: 208 DADLIMLGLSTHIKYVSILREEMKFQP-----------PVSRAA----KRDRESVTF--- 249
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFFVGNDFL 348
Q +++ +REY++ E+++ E ++E ++DDF+ +C F+GNDFL
Sbjct: 250 -----------QMIYLNIVREYMELEYKMLWKKVKKLEFNIERVIDDFLLICCFIGNDFL 298
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE-DRIFQK 407
P + IREG +L+ +YK YL D + ++ IQ + E D I K
Sbjct: 299 PRLYCFNIREGQFEILIQIYKDYLVEADSYLNDNGHINWVGLQQIIQRIAEVELDFIGDK 358
Query: 408 RARLHQRHAERIKREKAQARR-GDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSEC 466
+ + + RIK + + + GDD P + + S G +
Sbjct: 359 ATDITKEYKRRIKHQSDKDQEIGDDEVPGVKKGNDKKNSSSEGENDEDDEDFEDEDDDDY 418
Query: 467 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKS 526
G+ N +++ + S I E + E + Q+N+ F+ ++ L++K
Sbjct: 419 DGKQQN----YNLSYQIFKFQSKDDICDDNDEKDQ--EKNDQKNQVTFQQNFEKNLQEKK 472
Query: 527 DAFNSD--------NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL-RYTEG 577
+ N ++ K + K YY++K N + D+++ +Y EG
Sbjct: 473 KEEDKIIKKEKDFINDLQENYKKDQFLGKSYYYQQKLNLDFKNFDDIKTLDLLITKYLEG 532
Query: 578 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN-------ISFELGHPFKPFNQLL 630
L +V+ YYY+G SW W++P++YAP SD+ + I F+L P+ P QL+
Sbjct: 533 LQFVLLYYYQGCPSWSWYFPFYYAPMTSDISLFLNYKAEHLSQEIVFDLSEPYPPMKQLM 592
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPIS---DFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
+ +++ LP+ + +L+TDPNS + D+YP F +D G +S + I LPF+D+
Sbjct: 593 CIIHPENANLLPKPFAQLLTDPNSKLRSPVDYYPDKFTIDPYGGVFSHEYIVVLPFMDQK 652
Query: 688 RLLDEVKKIEH--TLTEEEARRNSIMADMLF 716
+ D I+ TLT +E RN ++ +
Sbjct: 653 LIDDVYSSIDQVKTLTPQERERNQFGKNIKY 683
>gi|343426938|emb|CBQ70466.1| probable KEM1-multifunctional nuclease [Sporisorium reilianum SRZ2]
Length = 1481
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/412 (43%), Positives = 244/412 (59%), Gaps = 65/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E+YPL+ + +IEE KIP E+DNLYLDMNGIIH
Sbjct: 1 MGIPKFFRFMSERYPLI-SQLIEEN-------KIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D A T ++F +F YI+ LF ++P+K+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPNDNDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +K+A + ++++ ER G LP + + FDSN ITPGT FMA LS L+Y+I
Sbjct: 102 FRTAKEAKE-------IKEKAERRGEVLP---EEEAFDSNCITPGTPFMAKLSQQLEYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++ D W ++VILS +VPGEGEHKIM Y+RL + P Y+PN RHCLYGLDADLIM
Sbjct: 152 AKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L +H+ HF +LRE V F P ++ K L Q
Sbjct: 212 LGLLSHDPHFCLLREEVQFGPRRKSKGSLESQN--------------------------- 244
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ LH+ REYLD EF+ + PF + E I+DDFI + FVGNDFLPH+P L
Sbjct: 245 ----FFLLHLSLFREYLDLEFQDLRSSLPFPYEFERIIDDFILLNIFVGNDFLPHLPGLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I EGA++LL +YK+ GGYL + R+E + + ++E F++
Sbjct: 301 INEGAMDLLFTIYKQILPVAGGYLNESGTLRTDRLELVLSELCNFEMEQFER 352
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 126/197 (63%), Gaps = 7/197 (3%)
Query: 518 LKELLRDKSDAFNSD--NPEED---KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 572
L L+ K D + D +PEED ++ WK+ YY+EK + + ++ +
Sbjct: 508 LSRYLKAKVDTASDDEVDPEEDYKQRLATQMAAWKKDYYKEKLEIDYNNDDDMSK--LAF 565
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 632
RY EGL WV+HYYY+GV SW WFY YHYAP SDLK+ Q FELG PF+PF+QL+GV
Sbjct: 566 RYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLKNAGQMKFEFELGKPFRPFDQLMGV 625
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
P+ SS +P +R L+TDPNSPI DFYP +FE D+NGK+ W+ + K+PFIDE RLL+
Sbjct: 626 LPALSSQHIPTAFRDLVTDPNSPIIDFYPNNFEADLNGKKQDWEAVVKIPFIDEKRLLEA 685
Query: 693 VKKIEHTLTEEEARRNS 709
+ K E L EE +RN
Sbjct: 686 LDKREVYLGIEERKRNG 702
>gi|258571185|ref|XP_002544396.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904666|gb|EEP79067.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1372
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/413 (44%), Positives = 252/413 (61%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E +++ REG ++P K D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA-------EMAKEKAIREGVEMP-KEDA--FDSNCITPGTEFMAKLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++VILS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 INKKVSEDAEWQGVEVILSGHEVPGEGEHKIMEYIRQSKAQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKVKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F+ D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELEVEGALKFDFDMERIIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
L I EGA+ + VYK+ L GY+ + + +L R+ + ++G E R F+
Sbjct: 302 LHINEGALAWMFKVYKEVLPKLDGYINERGRINLDRLGVLLDSLGDVEFRFFE 354
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
+PE Y LMT P+SPI DFYP DFE+DMNGK+ W+ + K+PFI+E RLL+ + EH L
Sbjct: 538 VPEAYHSLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFINETRLLNAMATKEHLL 597
Query: 701 TEEEARRNSIMADMLFV 717
T EE RNS + F
Sbjct: 598 TPEEKSRNSFGVTLKFT 614
>gi|71005096|ref|XP_757214.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
gi|46096576|gb|EAK81809.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
Length = 1478
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 244/412 (59%), Gaps = 65/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E+YP++ + +IE+ KIP E+DNLYLDMNGIIH
Sbjct: 1 MGIPKFFRFMSERYPMI-SQLIEDN-------KIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D A T ++F +F YI+ LF ++PRK+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPNDNDASFRITETQIFLAVFAYIEHLFNKIKPRKVFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +K+A + ++++ E G LP + + FDSN ITPGT FMA LS L+Y+I
Sbjct: 102 FRTAKEAKE-------IKEKAESRGEVLP---EEEAFDSNCITPGTPFMAKLSQQLEYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++ D W ++VILS +VPGEGEHKIM Y+RL + P Y+PN RHCLYGLDADLIM
Sbjct: 152 AKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L +H+ HF +LR EV F P ++ K L Q
Sbjct: 212 LGLLSHDPHFCLLREEVQFGPRRKSKGSLEMQ---------------------------- 243
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ LH+ REYLD EF+ + PF D E I+DDFI + FVGNDFLPH+P L
Sbjct: 244 ---NFFLLHLSLFREYLDLEFQDLRSSLPFPYDFERIIDDFILLNIFVGNDFLPHLPGLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I +GA++LL +YK+ A GGYL + R+E + + ++E F++
Sbjct: 301 INQGAMDLLFNIYKRILPAAGGYLNESGTLRTDRLELVLSELRNFEMEQFER 352
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 126/196 (64%), Gaps = 7/196 (3%)
Query: 518 LKELLRDKSDAFNSD--NPEEDKVKLGEP---GWKERYYEEKFNAKTPEEREETRKDVVL 572
L L+ K D + D +PEED K E WK+ YY+EK + +E +
Sbjct: 504 LIRYLKAKVDTASDDEADPEEDYKKRLEAQMTAWKQSYYKEKL--EIDYNNDEAMSKLAF 561
Query: 573 RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 632
RY EGL WV+HYYY+GV SW WFY YHYAP SDLK++ Q F LG PF+PF+QL+GV
Sbjct: 562 RYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLKNVGQMKFEFTLGKPFRPFDQLMGV 621
Query: 633 FPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDE 692
P+ SS +P +R LMTDPNSPI DFYPT+FE D+NGK+ W+ + K+PFIDE RLL+
Sbjct: 622 LPALSSQHIPSAFRDLMTDPNSPIIDFYPTNFEADLNGKKQDWEAVVKIPFIDEKRLLEA 681
Query: 693 VKKIEHTLTEEEARRN 708
+ K E L EE +RN
Sbjct: 682 LDKREVYLGIEERKRN 697
>gi|145347657|ref|XP_001418279.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578508|gb|ABO96572.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 509
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 188/384 (48%), Positives = 227/384 (59%), Gaps = 59/384 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWLAE+YPL+ + I G +IP DNLYLDMNG+IH
Sbjct: 1 MGVPKFFRWLAERYPLLQQE--------IAGNQIP-----------GIDNLYLDMNGVIH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H T T DE+ +F Y+D LF M RP K+LYMAIDGVAPRAKMNQQRSRR
Sbjct: 42 NCSHGAGTDVNTRMTEDEMMSKVFAYLDHLFRMTRPNKMLYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++ +AA EE R R E P+ + + FDSN ITPGTEFMA L+ L++Y+
Sbjct: 102 FRSAAEAAKDR-EEARARGE---------PEPEGEPFDSNCITPGTEFMARLTEHLKFYV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ DP W K+ VILS V GEGEHKIM ++R R P ++PN HCLYGLDADLIM
Sbjct: 152 RKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPDWEPNQTHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVV-FTPGQQDKCFLCGQPGH-LAANCEGKAKRKAGEFDEKGDEVV 296
LAL THE HF +LREVV F G++ GQP + +N
Sbjct: 212 LALVTHEPHFCLLREVVKFGGGEK------GQPSREILSNPTDDG--------------- 250
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ LHI LREYLD EFR N PF +LE ++DDFI +C VGNDFLP +PTL I
Sbjct: 251 -----FILLHIGLLREYLDLEFREKNLPFGYELERVIDDFILLCMLVGNDFLPALPTLNI 305
Query: 357 REGAINLLMAVYKKEFRALGGYLT 380
EGA+N L VY LGGY+T
Sbjct: 306 AEGALNTLFKVYHDTLPMLGGYIT 329
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Query: 542 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
G WK+ YY EK K E ++ Y +GL WV+ YYY GV SW W+YPYHYA
Sbjct: 363 GLQAWKDTYYREKLGLKIGEA--APLGEIRQAYFDGLNWVLRYYYRGVASWTWYYPYHYA 420
Query: 602 PFASDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
P ASDL + F+ G PFKPF QL+ V P +SS LPE +R M DP SP+++F+
Sbjct: 421 PMASDLCAGMGGLTSEFDYGEPFKPFEQLMAVQPPSSSKLLPEPFRHFMEDPQSPLAEFF 480
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
P D +VD GKR W+G+ LPF+D RL
Sbjct: 481 PEDIKVDFEGKRNDWEGVVLLPFLDADRL 509
>gi|358055066|dbj|GAA98835.1| hypothetical protein E5Q_05523 [Mixia osmundae IAM 14324]
Length = 1437
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 180/414 (43%), Positives = 247/414 (59%), Gaps = 67/414 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP++ + +I+E +P E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVSERYPMI-SQLIQE-------------GQQP-----EFDNLYLDMNGIIH 41
Query: 61 PCFHPE--DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + D T +++F +F YI+ LF +RP++ +MAIDGVAPRAKMNQQRSRR
Sbjct: 42 NCSHKDGGDVHHRVTEEQMFLAIFTYIELLFSKIRPKQTFFMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +K+A ++ R R+G +LP K D FDSN ITPGT FM LS L+Y++
Sbjct: 102 FRTAKEAKEA-------RDAAIRKGEELP-KEDP--FDSNAITPGTPFMTRLSAQLRYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ I+VILS VPGEGEHKIM ++R + PGY+PN RHCLYGLDADLIM
Sbjct: 152 NKKVSEDADWQGIQVILSGHEVPGEGEHKIMQFIRHSKAQPGYNPNVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L +H+ HF +LR EVVF GKA++ + + K
Sbjct: 212 LGLLSHDPHFCLLREEVVF----------------------GKARKTSQSLETKN----- 244
Query: 298 PKKPYQFLHIWTLREYLDYEFRI----PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ REYLD EF+ P F+ DLE I+DDFI + FVGNDFLPH+P
Sbjct: 245 ----FYLLHLSLFREYLDLEFQSLAADPTLGFQYDLERIIDDFILLAIFVGNDFLPHLPG 300
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
L I EGA+ LL +YK+ GGY+ + + + R+ ++ + S+E F+K
Sbjct: 301 LHINEGALTLLFEIYKRVLPKAGGYINEHGQLNTHRLSLILEELQSFESDNFEK 354
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 134/225 (59%), Gaps = 19/225 (8%)
Query: 505 TDPQENKEEFKAKLKELLR--DKSDA---FNSDNPEED---KVKLGEPGWKERYYEEKFN 556
+ P E+ +E+K + +L DK+ FN + E+ K++ WK YY +K
Sbjct: 493 SSPHED-DEWKEAISRILAKYDKAQTLPDFNEADFEDSYAQKLEQKMSAWKTDYYRDKL- 550
Query: 557 AKTPEEREETRK----DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 612
E E T K + RY EGL WV+HYYY+GV SW WFY YHYAP SDL+++D
Sbjct: 551 -----EFEFTDKPALHQLAFRYIEGLQWVLHYYYDGVASWGWFYDYHYAPKISDLQNVDH 605
Query: 613 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
F+LG PFKPF QL+GV P S+ LPE YR L+T P SPI DFYP DF++D+NGK+
Sbjct: 606 MEFVFDLGRPFKPFEQLMGVLPDLSATILPEAYRDLLTSPESPIKDFYPRDFKLDLNGKK 665
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
W+ + K+PFID+ARLL ++ LT +E +RN+ +F
Sbjct: 666 QDWEAVVKIPFIDQARLLHAMEGRSARLTPDEQQRNTWGDSYIFT 710
>gi|380483599|emb|CCF40522.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 553
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 219/619 (35%), Positives = 313/619 (50%), Gaps = 95/619 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTF----DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C H +D TTF +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+
Sbjct: 42 NCTH-KDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRA 100
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFR + D E+ R + EG ++P + FDSN ITPGTEFMA L+ L+Y
Sbjct: 101 RRFRTALDT-------EKARDKAISEGVEMPKEPP---FDSNCITPGTEFMAKLTQQLKY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDPNVRHCLYGLDADL 210
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML L +H+ HF +LRE V T G+ +K K E + +
Sbjct: 211 IMLGLLSHDPHFCLLREEV-TFGRVNKA-------------------KTRELEHQN---- 246
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ LH+ +REYL+ EF+ P F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 247 -----FYLLHLCIVREYLELEFQELQQPGRLSFPFDLERVIDDFILMAFFVGNDFLPNLP 301
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
L I EGA+ + +YK GY+ +G +L R++ + + E F+
Sbjct: 302 RLHINEGALAAMFRIYKSVLPQGDGYINEGGVINLPRLQRLLNELAKDETNQFENDVSDE 361
Query: 413 QR-HAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLD 471
+ ++++ R + L S + + + PSP P LD
Sbjct: 362 KWFQSKKLTEPNGADNRRPKGKGLVLTSSQRDLWKQQIRPYVNKPSPEP---------LD 412
Query: 472 NGKGTSGRPHK-VPRLSSGATIGAAIVEAEN-------SFETDPQENKEEFKA---KLKE 520
G G + K V L+ I + E + SF + EE + L
Sbjct: 413 LGTGLNAADRKFVQDLADTLHIEWSTKEDDEGHRHLLLSFPKGAENVNEEEEEGTLALYR 472
Query: 521 LLRDKSDAFNSDNPEEDKVKLGEP-------GWKERYYEEKFNAKTPEEREETRKDVVLR 573
++R A D ED + + GWK +YY +KF PE+ + +
Sbjct: 473 VMRTYDKATVVDVSGEDAQRQYKELYDQKYLGWKTKYYLQKFPEWAPEQYDAELTKLCEN 532
Query: 574 YTEGLCWVMHYYYEGVCSW 592
Y +GL WV++YYY G+ SW
Sbjct: 533 YVQGLQWVLYYYYRGIASW 551
>gi|350289466|gb|EGZ70691.1| hypothetical protein NEUTE2DRAFT_92294 [Neurospora tetrasperma FGSC
2509]
Length = 531
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 154/265 (58%), Positives = 198/265 (74%), Gaps = 10/265 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE++P+ + DG IPVD +KPNPNG E+DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-------FDSNVITPGTEFMAVLSI 172
RA+++A + ++++ + +++ K P+ + V FDSN ITPGT FM +L+
Sbjct: 121 RAAREAMEKEEDKQKFVELLKKQNGK--PQEEEPVEIVVKKAFDSNSITPGTPFMDILAA 178
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
+L+Y+ +LN DP W IKVI+SDA VPGEGEHKIM +VR QR P +DPNTRH +YGL
Sbjct: 179 SLRYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGL 238
Query: 233 DADLIMLALATHEVHFSILREVVFT 257
DADLIML LATHE HF +LRE VF
Sbjct: 239 DADLIMLGLATHEPHFRVLREDVFA 263
>gi|207345483|gb|EDZ72294.1| YGL173Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1409
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 317/599 (52%), Gaps = 62/599 (10%)
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 214
FDSN ITPGTEFMA L+ LQY+IH +++ND W ++++I S VPGEGEHKIM+++R
Sbjct: 9 FDSNSITPGTEFMAKLTKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRH 68
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 274
++ ++ NTRHC+YGLDADLIML L+TH HF++LRE V T G++
Sbjct: 69 LKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEV-TFGRR------------- 114
Query: 275 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECI 332
N E K+ + + + LH+ LREY++ EF+ FE + E I
Sbjct: 115 -NSEKKS---------------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERI 158
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 392
+DDFI + F +GNDFLP++P L + +GA +L+ +K+ GY+ + K +L+R+
Sbjct: 159 LDDFILVMFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRLGV 218
Query: 393 FIQAVGSYEDRIFQKR---ARLHQRHAERI--KREKAQARRGDDVEPLAQPDSLVPVSRF 447
++ + +E F+K + E I + E+ + R G + Q + + +
Sbjct: 219 WLNYLSQFELLNFEKDDIDVEWFNKQLENISLEGERKRQRVGKKLLVKQQKKLIGSIKPW 278
Query: 448 HGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPH----KVPRLSSGATIGAAIVEAENSF 503
+L SP E + L+ K + H K G I + + S
Sbjct: 279 LMEQLQEKLSPD--LPDEEIPTLELPKDLDMKDHLEFLKEFAFDLGLFITHSKSKGSYSL 336
Query: 504 ETD-----PQENKEEFKAK---LKELLRDKSDAFNSDNPEE---DKVKLGE--PGWKERY 550
+ D P E +EEF+ + +++ ++ +A ++ EE +K E WK Y
Sbjct: 337 KMDLDSINPDETEEEFQNRVNSIRKTIKKYQNAIIVEDKEELETEKTIYNERFERWKHEY 396
Query: 551 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KD 609
Y +K T + EE +D+ Y EGL WV++YYY G SW W+YP+HYAP SDL K
Sbjct: 397 YHDKLKFTT--DSEEKVRDLAKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKG 454
Query: 610 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
LDQ +I F+L PF PF QL+ V P S + +P +R LM D SPI DFYP + ++D N
Sbjct: 455 LDQ-DIEFDLSKPFTPFQQLMAVLPERSKNLIPPTFRPLMYDEQSPIHDFYPAEVQLDKN 513
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY 728
GK W+ + + F+DE RL++ ++ L+ EE RN D+++ +P +IY
Sbjct: 514 GKTADWEAVVLISFVDEKRLIEAMQPYLCKLSPEEKTRNQFGKDLIYSF--NPQVDNIY 570
>gi|290978067|ref|XP_002671758.1| predicted protein [Naegleria gruberi]
gi|284085329|gb|EFC39014.1| predicted protein [Naegleria gruberi]
Length = 1261
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/418 (45%), Positives = 254/418 (60%), Gaps = 61/418 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP ++WL+E+YP + + + E IP DNLYLDMNGIIH
Sbjct: 1 MGVPRLFKWLSERYPCIASSLTE--------ATIPT-----------VDNLYLDMNGIIH 41
Query: 61 PCFHPEDR-PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H +D A T E+ +F YID+LF +++P K ++A+DGVAPRAKMNQQRSRRF
Sbjct: 42 NCTHKDDELKAQLTEKEMILKIFRYIDQLFQLIKPSKHFFLALDGVAPRAKMNQQRSRRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R D E++LR++ E++G K+P + + +FDSN ITPGTEFMA LS+ L+Y+IH
Sbjct: 102 RKVFD-------EQQLRKKLEQKGEKVPERDN--LFDSNCITPGTEFMAKLSMHLKYFIH 152
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++ D W++ KVILS VPGEGEHKIM+++R ++ GY PN RHCLYGLDADLI L
Sbjct: 153 SKMQTDIKWQQCKVILSGHEVPGEGEHKIMNFIRGRKMEAGYQPNERHCLYGLDADLICL 212
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L THE HF +LRE VF + N + K K F EK
Sbjct: 213 GLVTHEPHFMLLREDVFEQYR---------------NNDSKEKSSNKPFAEK-------- 249
Query: 300 KPYQFLHIWTLREYLDYEFRIP----NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ LH+ LR+YLD+EFR FE DLE I+DDF+F FF GNDFLPHMPTL+
Sbjct: 250 --FHLLHLCALRQYLDFEFRQALLEQKLSFEYDLERIIDDFVFFIFFTGNDFLPHMPTLD 307
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR--ARL 411
I+EG+IN ++ +Y K+ GYLT+ L RV+ F++A+ S E + ++R ARL
Sbjct: 308 IKEGSINTMIDIY-KQILPKSGYLTELGDVHLERVQDFVRALASQESSMMEQRYTARL 364
>gi|402585499|gb|EJW79439.1| single-stranded RNA 5'-3' exonuclease [Wuchereria bancrofti]
Length = 446
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/409 (41%), Positives = 248/409 (60%), Gaps = 59/409 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V+++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVQDE-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D E +F+ +F+YID LF +++P+K+ +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 GCSHPDDEDISFRISEEQIFRDIFNYIDFLFGIIKPKKVFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F ++K+A ++ ++ + +G K+P D + FDSN ITPGTEFMA L LQY++
Sbjct: 102 FMSAKNAREALSKARK-------KGIKIP---DEKPFDSNCITPGTEFMARLHEQLQYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+ +++ LS N PGEGEHKIM ++R +R+ YD NTRHCLYGLDADLIM
Sbjct: 152 QMKITTDSCWQGLRIYLSGHNCPGEGEHKIMDFIRSERSRSDYDANTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L + +HE HF++LRE V G+ K + G+ DE+
Sbjct: 212 LGICSHEPHFALLREEVKF---------------------GRQKNRNGKHRTSVDEIT-- 248
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ LH+ LREYL +EF PF+ DLE ++DD++ M F +GNDF+PH+P + I
Sbjct: 249 ---FHLLHLSLLREYLSWEFYPLKEKLPFDYDLESVIDDWVLMGFLIGNDFIPHLPHVHI 305
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
E A+ LL A Y + L GY+ + +L+R E F++ + + F
Sbjct: 306 HEDALPLLYATYNEVLPQLDGYINEAGILNLKRFEIFLKNFAKNDRKNF 354
>gi|405973506|gb|EKC38214.1| 5'-3' exoribonuclease 1 [Crassostrea gigas]
Length = 1857
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/434 (41%), Positives = 246/434 (56%), Gaps = 64/434 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP + V E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWVSERYPCLSETVKE--------YQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HPED T +++F+ +F Y++ LF M++PRK+ +MAIDGVAPRAKMNQQR RR
Sbjct: 42 VCSHPEDDNPHFRITEEKIFKDIFHYLEFLFRMIKPRKVFFMAIDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR SA E E L ++ G LP + + FDSN ITPGTEFM L L+Y++
Sbjct: 102 FR-------SAREAEALERKARESGETLPTE---KRFDSNCITPGTEFMVKLHEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++++DP W + V LS PGEGEHK+M ++R Q++ P YD NTRHCLYGLDADL+M
Sbjct: 152 TSKISSDPLWHGVDVYLSGHETPGEGEHKVMDFIRCQKSKPDYDANTRHCLYGLDADLMM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE HFS+LRE V G++D+ KR A
Sbjct: 212 LGLATHEPHFSLLREEVRFGGKKDR-----------------NKRPA----------TPE 244
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ REYLD+EF PF LE I+DD+I M F VGNDF+PH+P L I
Sbjct: 245 ETTFHLLHLSLFREYLDFEFSFLKDKLPFGYSLENIIDDWILMGFLVGNDFIPHLPHLHI 304
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE----DRIFQKRARLH 412
+ A+ LL Y GGY+ +G +L R + +++ + ++ +F
Sbjct: 305 QHDALPLLWKTYMTILPECGGYMNEGGHLNLERFDRYMKELAKFDLDKFSEVFTDLKWFE 364
Query: 413 QRHAERIKREKAQA 426
+ AER ++E+ +
Sbjct: 365 GKTAERSEKEQMEG 378
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 103/163 (63%)
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
+D Y + W++ YY+EGV SW WFYP+HYAPF SD+ D I FE+G PF PF
Sbjct: 460 RDQCEEYVRAIQWILLYYFEGVPSWSWFYPHHYAPFISDVTDFKDMEIKFEMGSPFLPFQ 519
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+ V P+AS LPE Y+KLMT SP+ DFYP DF+ D+NGK+ W+ + +PFIDEA
Sbjct: 520 QLMAVLPAASKELLPEPYQKLMTQDISPVIDFYPVDFQTDLNGKQQEWEAVVLIPFIDEA 579
Query: 688 RLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
RLL+ +K +E+ L+ E +RN+ +L+ L TL
Sbjct: 580 RLLEAMKSVENQLSPSEKKRNAHGPCLLYDYTPDTLEPCTSTL 622
>gi|218185281|gb|EEC67708.1| hypothetical protein OsI_35184 [Oryza sativa Indica Group]
Length = 944
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/316 (55%), Positives = 208/316 (65%), Gaps = 24/316 (7%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVV---IDGVKIPVDTSKPNPNGLEYDNLYLDMNG 57
MGVP+FYRWL KYP +V+ +++ V +G P Y NLYLDMNG
Sbjct: 1 MGVPSFYRWLVGKYPAIVSPANDDDDDVGSSSNGAAAPP----------VYHNLYLDMNG 50
Query: 58 IIHPCFHPEDR-----PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
IIHPCFHP+D+ P PTT +EVF MFDY+DRL +VRP LLY+A+DGVAPRAKMN
Sbjct: 51 IIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKMN 110
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPK---SDSQVFDSNVITPGTEFMAV 169
QQR+RRF+++ A + EE LR F EG+K+ P+ S S+V D NVITPGTEFM
Sbjct: 111 QQRARRFKSAMPAKQAEVEENILRDRFRAEGKKVLPQETSSSSEVSDPNVITPGTEFMDK 170
Query: 170 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 229
LS AL+YYI LNNDP W+ I VILSDANVPGEGEHKIMS++R QR GYDPNTRHCL
Sbjct: 171 LSDALKYYIRAHLNNDPLWKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCL 230
Query: 230 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG--E 287
YGLDADLIMLALA+HEVHFSILRE V Q+ P + K K +A
Sbjct: 231 YGLDADLIMLALASHEVHFSILREEVLHQNNQENTIPI-TPKTFTSQEAEKFKCRAWFPR 289
Query: 288 FDEKGDEVVVPKKPYQ 303
E E + KKPYQ
Sbjct: 290 ITEARPEGKLTKKPYQ 305
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 155/281 (55%), Gaps = 30/281 (10%)
Query: 492 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYY 551
+ ++ + + S E D N E + LK++L +K D + + DK+KLG PGWK R++
Sbjct: 473 VKSSQTDGQVSDEQDITMNTLELRKNLKDILHNKQDLIKTGACKHDKIKLGSPGWKSRFF 532
Query: 552 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 611
+EKF+A+T +E + + ++V +Y EGLCWV+ YY+ V SW W+YP++YAPFASD++ L
Sbjct: 533 KEKFDAETKDEIAKLQNEMVQKYLEGLCWVLCYYFADVPSWSWYYPFYYAPFASDVRGLS 592
Query: 612 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
+ S ALP Y KLM S I FYP++ ++D +GK
Sbjct: 593 R-------------------------SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGK 627
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIY 728
RY WQGIAKLPFI++ LL K E L E RRN++ + +F+ S+ L+ A
Sbjct: 628 RYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQ 687
Query: 729 TLDEHCKQLKIKERV-EVKERLNPELSDGMNGYI-SPCAGD 767
T D ++L I E+ L+P+ D NG+ SP D
Sbjct: 688 TSDCSLQKLPIDPATSEIGGWLSPDDDDFSNGFCGSPIEND 728
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKP--------SLRRVEHFIQAVGSYEDRIFQK 407
+GAI+LL+ VYK F +GGY+ D K + R+E F + YE++IF K
Sbjct: 305 QGAIDLLIEVYKTSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHKLSLYEEKIFLK 362
>gi|452820477|gb|EME27519.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 1343
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 191/439 (43%), Positives = 250/439 (56%), Gaps = 66/439 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YPL + V+ + DN YLD NGI+H
Sbjct: 1 MGVPKFYRWVSERYPLTIHKVVPSVVP-------------------DVDNFYLDANGILH 41
Query: 61 PCFHPED--RPAPTTF---DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
C P+D P P + +E+F F+YID LF MVRP++L+Y+AIDGVAPRAKMNQQR
Sbjct: 42 NCARPKDSQEPFPCQYPSEEEIFLETFNYIDMLFSMVRPKRLVYIAIDGVAPRAKMNQQR 101
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
+RRFR +KD A E R++Q G+ +P + FDSN ITPGT FMA S AL+
Sbjct: 102 ARRFRTAKDRAQEM--ENRIKQ-----GKPVPQR----FFDSNCITPGTHFMASFSEALE 150
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y +H ++ D W ++VILS NVPGEGEHKI+ Y+R ++ ++ N HCLYGLDAD
Sbjct: 151 YLVHKKITEDKSWATVEVILSTTNVPGEGEHKIIEYIRRKKLSGEWEANLSHCLYGLDAD 210
Query: 236 LIMLALATHEVHFSILREVVFTPGQQD--KCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
LIML+L THE HF +LRE Q D K F+ + G+LA + +GEF
Sbjct: 211 LIMLSLVTHEPHFILLRE------QTDLSKLFV-SKKGNLAVEATPLDRCISGEF----- 258
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+F I LREYLD EF P +LE + DFIFMCF VGNDFLP +PT
Sbjct: 259 ---------EFFSIGVLREYLDSEF-CTLPITFYNLENCIHDFIFMCFLVGNDFLPQLPT 308
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
L I EGA++ ++ +YKK GGYL + L R+E F+ +G E I +R
Sbjct: 309 LNIAEGALDTMLTLYKKLLPLFGGYLIENGNIVLERLEIFLSKLGLLERLIVNRR----- 363
Query: 414 RHAERIKREKAQARRGDDV 432
E I + K +A R D+
Sbjct: 364 --LEAIAQSKGRAPRMVDI 380
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 107/173 (61%), Gaps = 5/173 (2%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
K+ YY +K N E +++ + + Y +GL W YYY G SW+WFYPYHYAP ASD
Sbjct: 431 KKSYYRDKLNMDL--EDKDSLEKLKFTYLKGLLWTWKYYYSGCPSWRWFYPYHYAPMASD 488
Query: 607 LKDLDQF-NIS-FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
L L NI F PF PF QLL V P S+ LP +KLM D +SPI FYP+DF
Sbjct: 489 LVGLTGVTNICDFSASEPFLPFQQLLAVLPPQSAWCLPTALQKLMNDKSSPIFRFYPSDF 548
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL-TEEEARRNSIMADMLF 716
EVDM+GKR +W+G+ KLPF+DE+ LL+ I + L +EEE RN+ M++
Sbjct: 549 EVDMDGKRNAWEGVIKLPFVDESLLLEAYHSIPNELFSEEERNRNACRQTMIY 601
>gi|449519150|ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 590
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/197 (77%), Positives = 169/197 (85%)
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
Q FYPYHYAPFASDLK L + NISF LG PFKPFNQLLGVFP+AS+HALPE YRKLMTD
Sbjct: 95 QRFYPYHYAPFASDLKGLGELNISFNLGTPFKPFNQLLGVFPAASAHALPEQYRKLMTDQ 154
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
NSPI DFYPTDFEVDMNGKRYSWQGIAKLPFIDE RLL EV K+EHTLTEEEARRNSIM
Sbjct: 155 NSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEEARRNSIMF 214
Query: 713 DMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPV 772
DMLFV SHPLS SIY+LD CKQL ++R EVKE++NPE S+GMNGY+SPC G+ PP+
Sbjct: 215 DMLFVTSSHPLSVSIYSLDNRCKQLAERDRTEVKEKINPEHSEGMNGYLSPCLGELCPPI 274
Query: 773 FRSPVASMEDIMGNQVL 789
FRSPV +EDI+ NQV+
Sbjct: 275 FRSPVEGLEDIIDNQVI 291
>gi|221054456|ref|XP_002258367.1| exoribonuclease [Plasmodium knowlesi strain H]
gi|193808436|emb|CAQ39139.1| exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 1324
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 186/477 (38%), Positives = 270/477 (56%), Gaps = 60/477 (12%)
Query: 1 MGVPAFYRWLAEKYPLVV--------ADVIEEEPVVIDG---------VKIP-----VDT 38
MGVP FYRWL +YP + +DV + DG ++P V+
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIQDGHRDAEGKATYRVPDLSDYVNN 60
Query: 39 S-----KPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVR 93
+ N NG +DNLYLDMNGIIH C H ++ + +E+F +F YI+RLF ++
Sbjct: 61 TDENHCSDNINGY-FDNLYLDMNGIIHLCSHSDNSRRAKSNEEIFLNIFLYIERLFDIIE 119
Query: 94 PRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQ 153
PRKLLYMAIDGVAP+AKMNQQRSRRF++ + LR++F E R++P +
Sbjct: 120 PRKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERKAYIELREKFLSENREVP--EEFT 177
Query: 154 VFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVR 213
+DSN+ITPGT+FM LS+AL+Y++ ++ ND W+ I VI SDANV GEGEHKI ++++
Sbjct: 178 FWDSNIITPGTQFMYELSVALKYFVEHKITNDDKWKNIVVIFSDANVCGEGEHKIYNFIK 237
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQ-----QDKCFLCG 268
QR PGYDPNTRH ++G+DADLIML+LA+HE +F ILRE++ + QDK F+
Sbjct: 238 SQRGQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQDKDFV-- 295
Query: 269 QPGHLAAN-----CEGKAKRKAGEFDEKGDE--VVVPKKP-----------YQFLHIWTL 310
G L + C ++ + + D + K P Q L + L
Sbjct: 296 --GKLKSKQDLPLCTTHMRKTKKIYTKYNDPHYANINKSPNYSINDENWNELQILDLTIL 353
Query: 311 REYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
REYL EF + +LE +DDFIF+CF GNDFLPH+P++ I G+I+ L+ +Y+K
Sbjct: 354 REYLSKEFFFDS---SYNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQK 410
Query: 371 EFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQAR 427
LG YL + K +L+ ++ + E F + ++ +R +++ + R
Sbjct: 411 VLPVLGDYLINEGKINLKPFSKYVSFIAEVERETFISQYDFKKKREKRDQQKDSLKR 467
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 137/229 (59%), Gaps = 9/229 (3%)
Query: 503 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKE----RYYEEKFNAK 558
ET + EF L+E ++ A ++P+ED V+LG E +YY+ KF+
Sbjct: 682 METKRINDINEFNMLLREAVKK---AGKCEHPKED-VELGCDENPEVIRIKYYKAKFHLD 737
Query: 559 TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 618
+ ++ K+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL +D N F+
Sbjct: 738 ETDYIDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVNFIFQ 796
Query: 619 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 678
P P QLL V PS SSH LP+ YR+LM P+SPI DFYP F+ + NGK+Y +Q +
Sbjct: 797 KDEPILPLEQLLCVLPSNSSHCLPKGYRELMVRPDSPIIDFYPKTFKEEENGKKYKYQWV 856
Query: 679 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
LPF+D+ R++ +++ TLTEEE +RN + +++ SHPLS I
Sbjct: 857 ILLPFVDKERIIKHARELNDTLTEEEKKRNRRGMNKIYMNCSHPLSKQI 905
>gi|452981894|gb|EME81653.1| hypothetical protein MYCFIDRAFT_215434 [Pseudocercospora fijiensis
CIRAD86]
Length = 1239
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 201/469 (42%), Positives = 266/469 (56%), Gaps = 74/469 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPPISQLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPED---RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H + A + DE+F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHNDSDSVTKARLSEDEMFLKIFNYIEFLFGKIKPQKLFFMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E+ R + EGR+LP K D FDSN ITPGTEFMA L+ L+Y+
Sbjct: 102 RFRTALDA-------EKARDKAIAEGRELP-KEDP--FDSNCITPGTEFMARLTQQLKYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
+ +++ D W+ +++LS VPGEGEHKIM Y+R ++ YDPN RHCLYGLDADLI
Sbjct: 152 VAKKVSEDGDWQGCEIVLSGHEVPGEGEHKIMEYIRQAKSQLDYDPNVRHCLYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q GK+K + E
Sbjct: 212 MLGLLSHDPHFCLLREEV-TFGRQ-----------------GKSKSQDLEHQN------- 246
Query: 298 PKKPYQFLHIWTLREYLDYEFR-------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
+ LH+ +REYL+ EF+ + N PF D+E I+DDFI M FFVGNDFLP+
Sbjct: 247 ----FFLLHLCIVREYLELEFQELKEKGALGNLPF--DMERIIDDFILMAFFVGNDFLPN 300
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF----Q 406
+P L I EGA+ L+ AVYKK GGY+ DG +L R+ ++ + E R F Q
Sbjct: 301 LPYLHINEGALALMFAVYKKILPKAGGYINDGGTINLERLALLLEELSDVEYRHFEAENQ 360
Query: 407 KRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG 455
L + + + ++G V Q + V RF SR ASG
Sbjct: 361 DAGWLKDKSIHKEDVMQKTKKKGVTVMSTNQKELYQKVKRFVNSRPASG 409
>gi|195398773|ref|XP_002057995.1| GJ15840 [Drosophila virilis]
gi|194150419|gb|EDW66103.1| GJ15840 [Drosophila virilis]
Length = 1656
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/414 (40%), Positives = 247/414 (59%), Gaps = 68/414 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------SIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +++YID+LF +++P+KL ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEPQIFQDIYNYIDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
FR++++A ++ A + R+E ER FDSN ITPGTEFMA L + L+
Sbjct: 102 FRSAREAEMLEAKALQRGERREHER-------------FDSNCITPGTEFMARLQLGLRC 148
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ +++ DP W+K ++ILS PGEGEHKIM Y+R + P +DPNTRHCLYGLDADL
Sbjct: 149 FLRTKISTDPLWQKCRIILSGQETPGEGEHKIMDYIRYMKAQPNFDPNTRHCLYGLDADL 208
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L THE+HF +LRE V +F
Sbjct: 209 IILGLCTHELHFVVLREEV-------------------------------KFGRNVKRTS 237
Query: 297 VPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
V + + LH+ LREYL+ EF ++ P ++D+ ++DD++ M F VGNDF+PH+P L
Sbjct: 238 VEETRFFLLHLGLLREYLELEFHQLSTPEQKLDVAQLIDDWVLMGFMVGNDFIPHLPCLH 297
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
I A+ LL Y + +R LGG + + K +L R+E F+ A+ E ++F++ +
Sbjct: 298 ISSNALPLLYKTYIRIYRQLGGNINEHGKLNLERLEQFMHALSEVELQLFEEHS 351
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 102/168 (60%), Gaps = 11/168 (6%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVV----LRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
+K YY KF + E D++ Y + WV+ YYY GV SW W+YPYHY
Sbjct: 415 NYKRNYYRNKF-------KNEMHSDLIAELGYHYVTAMQWVLDYYYRGVQSWDWYYPYHY 467
Query: 601 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
APF SDL ++ I+F+LG PF PF QLL V P+AS LP Y LM +PNSP+++FY
Sbjct: 468 APFISDLTNIKDIRINFKLGKPFLPFQQLLAVLPAASVSLLPAAYHDLMLNPNSPLAEFY 527
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
PT+FE D+NGK++ W+ + +PFI+E RLL + E L EE RN
Sbjct: 528 PTEFESDLNGKKHDWEAVVLIPFIEEDRLLRAMSACEPLLNSEERNRN 575
>gi|449687936|ref|XP_002167193.2| PREDICTED: 5'-3' exoribonuclease 1, partial [Hydra magnipapillata]
Length = 487
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 207/564 (36%), Positives = 294/564 (52%), Gaps = 86/564 (15%)
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNV 159
MA+DG APRAKMNQQRSRRFR +K+A EE +R+ ++ G+ LPP FDSN
Sbjct: 1 MAVDGCAPRAKMNQQRSRRFRTAKEA------EEAIRKAIQK-GQTLPPDDR---FDSNC 50
Query: 160 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 219
ITPGTEFM L L+Y+++ ++++DP W++ + LS +VPGEGEHK+M ++R ++ P
Sbjct: 51 ITPGTEFMWRLQHQLKYFVNQKISSDPLWQECTIYLSGHDVPGEGEHKVMDFIRYCKSKP 110
Query: 220 GYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEG 279
YDPNTRHCLYGLDADLIML L+THE HFS+LRE + G+Q K L
Sbjct: 111 DYDPNTRHCLYGLDADLIMLGLSTHEPHFSLLREEI-RYGKQSKRLL------------- 156
Query: 280 KAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFI 337
+ DE + + LH+ LREYL+ EF I F D E I+DD+I
Sbjct: 157 -----------RPDE-----QTFHLLHLSLLREYLEMEFIIVKDLLHFRFDTERIIDDWI 200
Query: 338 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 397
F+ F VGNDF+PH+P + I A+ + +YK+ GYL DG +L R++ F + +
Sbjct: 201 FLGFLVGNDFVPHLPHMHINHDALPYIFKIYKEFLPTTDGYLNDGGMINLCRLKKFFEFL 260
Query: 398 GSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPS 457
++ R R H+ +A D++ L S G L +
Sbjct: 261 SKFD------RERFHEVYA--------------DLKWLESKGS--------GKLLENSAG 292
Query: 458 PSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEA--ENSFETDPQENKEEFK 515
+ L+ K S +I A I A E S P++
Sbjct: 293 KKKFADVMRELALEELNEDLEEIRKSKLFDSQYSINANISGAFDELSLNLTPEK-----P 347
Query: 516 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 575
KLK L +D ++ E +++ + K YY EKF+ + E + + Y
Sbjct: 348 GKLKTL----NDDIEVEDDETFELEFQQH--KRHYYMEKFDMDIAD--NEHIQTICTEYV 399
Query: 576 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 635
L W+ HYY+ G+ SW W+YPYHY+P+ SD+ + + I+FE+GHPF PF QLL V P+
Sbjct: 400 IALQWISHYYFNGLQSWSWYYPYHYSPYISDVANFELKEINFEMGHPFLPFEQLLAVLPA 459
Query: 636 ASSHALPEHYRKLMTDPNSPISDF 659
AS LPE Y ++M ISD+
Sbjct: 460 ASRKLLPEAY-QVMISFYDYISDY 482
>gi|224060082|ref|XP_002195477.1| PREDICTED: 5'-3' exoribonuclease 1 [Taeniopygia guttata]
Length = 1699
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 246/410 (60%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP ++ V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYPCLI-QVLKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFANIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L+ L+Y++
Sbjct: 102 FRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLNEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ I V LS PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGITVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HF++LRE V G+ KA+R V P
Sbjct: 212 LGLTSHEAHFALLREEVRFGGK-------------------KAQR-----------VCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF FE D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSPVKDKISFEYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYRTYMAILPELGGYINENGHLNLERFEKYLAKLSDFDREHF 351
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 113/186 (60%), Gaps = 3/186 (1%)
Query: 532 DNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
D PE+D + E +K YY K + + D Y + + W++HYYY GV
Sbjct: 418 DEPEDDDLFETEFRQYKRTYYMTKMGVEVVSD--AFLADQAECYVQAIQWILHYYYHGVQ 475
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SW W+YPYHYAP+ SD+ ++ + I FELG PF PF QLL V P+AS LP+ Y+ LMT
Sbjct: 476 SWSWYYPYHYAPYLSDIHNISELKIKFELGKPFMPFEQLLAVLPAASKDLLPKCYQHLMT 535
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
+SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE RRN+
Sbjct: 536 SQDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNKGLKEEEKRRNTH 595
Query: 711 MADMLF 716
A +++
Sbjct: 596 SACLMY 601
>gi|298707210|emb|CBJ29957.1| 5'-3' exoribonuclease 1 [Ectocarpus siliculosus]
Length = 488
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/413 (46%), Positives = 241/413 (58%), Gaps = 59/413 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP + +V D +P E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFYRWISERYPKI-------NQIVSDSTLLP-----------EFDNLYLDMNGILH 42
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C HP D E + +F YIDR+ +VRPR++LYMAIDGVAPRAKMNQQRSR
Sbjct: 43 TCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSR 102
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFRA KD +E +L E + E D+ VFDSN ITPGTEFMA +S L+Y+
Sbjct: 103 RFRARKDM-----QEAKLIAESKGE-----VVDDTAVFDSNCITPGTEFMAKISRHLRYF 152
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
+ ++ DP W+ + V S VPGEGEHKIM+Y+R +R+ PNTRHC+YG DADLI
Sbjct: 153 VQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLI 212
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
+L L THE HF++LREVV GQ G A+ K R A
Sbjct: 213 LLGLVTHEPHFTLLREVV-NFGQN------AARGKNASKVVVKTTRDA------------ 253
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP---PFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+Q LH+ LREY+ EF P E+D E +VDDF+F+ F VGNDFLPHMP+L
Sbjct: 254 ---QFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSL 310
Query: 355 EIREGAINLLMAVYK--KEFRALGGYLT-DGSKPSLRRVEHFIQAVGSYEDRI 404
+I E A +LL +Y+ K GGYLT +G+ R+E F+ VGS ED I
Sbjct: 311 DIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEI 363
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 542 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
G +K RYY EKF TP E + Y EGL W + YYY G SW WF+P+HY
Sbjct: 425 GGKDYKGRYYFEKFGI-TPLH-TEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYV 482
Query: 602 PFASDL 607
P SDL
Sbjct: 483 PMISDL 488
>gi|289577074|ref|NP_957327.2| 5'-3' exoribonuclease 1 [Danio rerio]
Length = 1697
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 243/410 (59%), Gaps = 63/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A EE++++ E+ G LP ++ FDSN ITPGT+FMA L L+Y++
Sbjct: 102 FRSAKEA------EEKIKKALEK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +L+ D W+ + V LS PGEGEHKIM ++R + PG++PNTRHCLYGLDADLIM
Sbjct: 152 HNKLSTDKTWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V R G+ +K + P
Sbjct: 212 LGLTSHEPHFSLLREEV---------------------------RFGGKKSQK--RITAP 242
Query: 299 KK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF FE DLE I+DD++ M F VGNDF+PH+P L
Sbjct: 243 EETTFHLLHLSLMREYIDYEFSELRKKISFEYDLERIIDDWVLMGFLVGNDFIPHLPHLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y +LGGYL + +L E +++ + ++ F
Sbjct: 303 INHDALPLLYRTYINVLPSLGGYLNENGHLNLTHFEKYLEKLSDFDREHF 352
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + E + Y EG+ W++HYYY GV SW W+YPYHYAPF S
Sbjct: 435 YKRTYYMTKMGVEVVSD--EFLANQAKCYVEGIQWILHYYYHGVQSWSWYYPYHYAPFLS 492
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ +++F+L PF PF QLL V PSAS LP+ Y+ LMT +SPI ++YP DF+
Sbjct: 493 DVRNISGLSLTFDLAKPFMPFEQLLAVLPSASKDLLPQCYQHLMTSLSSPIVEYYPQDFK 552
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE LL ++ H LT E RN
Sbjct: 553 TDLNGKQQEWEAVVLIPFIDEKCLLAAMEPYTHNLTPSEKARN 595
>gi|47216611|emb|CAG10909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1574
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 245/412 (59%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP ++++++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEIVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYVEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A EE++++ ++ G LP ++ FDSN ITPGT+FMA L L+Y++
Sbjct: 102 FRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLEYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +L+ D W+ ++V LS PGEGEHKIM ++R + N PG+DPNTRHCLYGLDADLIM
Sbjct: 152 HSKLSTDKLWQNVRVYLSGHETPGEGEHKIMEFIRSENNGPGHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE +FS+LRE V G++ + + P
Sbjct: 212 LGLTSHEPNFSLLREEVRFGGKKSQ-----------------------------KRITAP 242
Query: 299 KK-PYQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + DLE I+DD+I M F +GNDF+PH+P L
Sbjct: 243 EETTFHLLHLSLMREYIDYEFSVLRNHLGSTYDLERIIDDWILMGFLIGNDFIPHLPHLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y +LGGYL + +L+ E +++ + ++ F +
Sbjct: 303 ISHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFEKYLEKLSEFDREHFSE 354
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 84/115 (73%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y EG+ W++HYYY GV SW W+YPYHYAPF SD+K++ + ++F+L PF PF QLL V
Sbjct: 447 YVEGIQWILHYYYHGVQSWSWYYPYHYAPFLSDIKNVAELKLTFDLEKPFMPFQQLLAVL 506
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
P+AS LPE YR LMT NSPI ++YP DF+ D+NGK+ W+ + +PFIDE R
Sbjct: 507 PAASMELLPEAYRHLMTSENSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDEVR 561
>gi|403304034|ref|XP_003942618.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1706
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 244/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + PF+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKIPFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|403304036|ref|XP_003942619.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1694
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 244/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + PF+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKIPFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|66359900|ref|XP_627128.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
gi|46228551|gb|EAK89421.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
Length = 1350
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 182/483 (37%), Positives = 259/483 (53%), Gaps = 54/483 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVA---DVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNG 57
MGVP FYRWL +YPL+V D ++EE + D +D ++PN NG E+D LYLDMNG
Sbjct: 1 MGVPTFYRWLCNRYPLIVKELKDAVDEETCLND-----LDLTEPNING-EFDCLYLDMNG 54
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IIHPC +P P E+F + DYIDRL+ MV+PR+L+YMAIDGVAPRAKMNQQRSR
Sbjct: 55 IIHPCCNPSGGDKPKDEAEMFTRVCDYIDRLYAMVKPRRLIYMAIDGVAPRAKMNQQRSR 114
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R++ + + + E ++EF + G K P + +DSNVITPGT FM L++ L Y
Sbjct: 115 RYKTALEMDYNRRAYEIAQEEFSKIGYKCPEYVEK--WDSNVITPGTPFMERLTMCLHAY 172
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I + D W I VI SD+N+PGEGEHKI+ ++R QR+ Y+PNTRH LYG DADLI
Sbjct: 173 IRRKFETDESWRSISVIFSDSNIPGEGEHKILEFIRNQRSNEDYNPNTRHVLYGSDADLI 232
Query: 238 MLALATHEVHFSILREVVF-----TPGQQDKCFLCG----QPGHLAANCEGKAKRKAGEF 288
ML L+THE +F I+RE V +P + HL ++ + +
Sbjct: 233 MLGLSTHESYFYIIREAVRDFKVESPSSISILYNTWIEKINNNHLGSSFGDNGTNNSSDI 292
Query: 289 DEKGDEVVVPK--KPYQFLHIWT---------LREYLDYEF------------------- 318
G P K + W+ LREYL+++F
Sbjct: 293 ILNGIFQNGPNFGKKLRIYSWWSDIEIVDLSMLREYLNFDFGEIRDQIGYINNNIGENLV 352
Query: 319 ----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRA 374
N F+ D E +DDFIF+CFF+GNDFLP++P I +G+++ ++ +Y +
Sbjct: 353 NEYGMKNNSDFQYDFERCIDDFIFLCFFIGNDFLPNLPVFSIYKGSLDQILGIYIRVLPR 412
Query: 375 LGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEP 434
+G YLT + F + + E I + +R QR + + + ++++
Sbjct: 413 IGDYLTLEGNIIPNSIIQFFKYLRDLEYEIIIQESRFSQRTSTFANDRGRRMIKNNNIDN 472
Query: 435 LAQ 437
Q
Sbjct: 473 TGQ 475
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA-------SDLKDLDQFNIS- 616
E V + Y GL WV+ YYY GV SW W+YPYHYAP+ SD+K+ ++ S
Sbjct: 696 EISDQVCIHYLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVELLSDVKNENKIKESL 755
Query: 617 ---FELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
F LG PF F QL+ V P S LP+ + +M D ++P+S+FYP+ F+ D NG +
Sbjct: 756 IGEFNLGKPFTQFEQLMSVLPPKSGKICLPKEFYNMMIDKDNPLSEFYPSKFKQDPNGNK 815
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
W+ +A LPFID+ LL+ V +E+ + RN + D+L+ PL I
Sbjct: 816 QRWKWVALLPFIDQKVLLETVIPLENEMDVLSKYRNKLGCDILYSFKFSPLKNII 870
>gi|351699398|gb|EHB02317.1| 5'-3' exoribonuclease 1 [Heterocephalus glaber]
Length = 1707
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 245/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NVKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + N F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKENITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D + Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAVCYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPVCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L EEE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKEEERKRN 593
>gi|440293121|gb|ELP86283.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 782
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 167/366 (45%), Positives = 228/366 (62%), Gaps = 21/366 (5%)
Query: 36 VDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPR 95
D PN NG E DN YLDMNG+IHPCFHP+DRPAP T D++ + Y+D + +VRPR
Sbjct: 11 TDLDSPNLNGFEIDNFYLDMNGLIHPCFHPQDRPAPDTIDDMLIMLKRYLDYIIDIVRPR 70
Query: 96 KLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVF 155
KL+YMA+DGVAPRAKMNQQR+RRF+A++D + E + + +G LP + +
Sbjct: 71 KLVYMAVDGVAPRAKMNQQRARRFKAARDKKSAMDFEAQQAADALAKGTPLP--ASKKEM 128
Query: 156 DSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQ 215
DSN ITPGT FM + L+ Y+ R++ W+K+ VI+SD++VPGEGEHKIM Y+R Q
Sbjct: 129 DSNCITPGTVFMDRVIETLKAYVKERISTSAYWKKLVVIISDSSVPGEGEHKIMEYIRKQ 188
Query: 216 RNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAA 275
++ P Y+PN HC+YGLDADLIML LATHE +F ++RE V KC++CG H A
Sbjct: 189 KDQPNYNPNLNHCIYGLDADLIMLTLATHERNFFVIREDVLNT----KCYICGG-AHPVA 243
Query: 276 NCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDD 335
C K + D + KP+ F+ I +R+ + +P D E I+DD
Sbjct: 244 FCPKKNEINP------MDPI---NKPFVFVSILDVRKLIYLLGMVPG----YDFERIIDD 290
Query: 336 FIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ 395
FIF+CFF+GNDFLPH P+LEI I+L+M +Y KEF GY+TD + ++ +
Sbjct: 291 FIFLCFFIGNDFLPHSPSLEIYHEDISLIMELY-KEFLLKNGYVTDAGNLDMAAFKNLLT 349
Query: 396 AVGSYE 401
+ E
Sbjct: 350 FLSRNE 355
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 135/256 (52%), Gaps = 23/256 (8%)
Query: 494 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEE 553
+AI EA+ + +T EEF+ KE K FN D V+ +PG++ERYY
Sbjct: 383 SAIAEAKANKQT------EEFEKLTKEFTESKL-KFNEMIFGGD-VEYDKPGYEERYYNS 434
Query: 554 KFN---AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KD 609
K + K P++ EE +V Y +GL WV+ YYY+G W WF+P++YAPF +D+ K
Sbjct: 435 KLHIDIVKEPKKVEE----LVHEYVKGLVWVLKYYYQGCKGWGWFFPHNYAPFITDMAKY 490
Query: 610 LD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 668
D +NI+F+ P P QL+ V P S +P+ R L+ SP+ +FYP F++D
Sbjct: 491 FDYTWNITFDFEEPSTPVEQLMSVLPPFSKKCVPKSCRALLNSETSPLKEFYPETFQIDF 550
Query: 669 NGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA-DMLFVLLSHPLSASI 727
+G + G+ LPFI+ +LL ++ IE ++ RN ++ ++PL +I
Sbjct: 551 DGYAVEYLGVVLLPFIERPKLLKYLRPIEDAFVGDDKERNKASGVAHIYFYRNNPLFKNI 610
Query: 728 ---YTLD--EHCKQLK 738
YT D +H LK
Sbjct: 611 GQAYTKDPIKHLNHLK 626
>gi|395833059|ref|XP_003789564.1| PREDICTED: 5'-3' exoribonuclease 1 [Otolemur garnettii]
Length = 1666
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 246/410 (60%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ KA+R V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK-------------------KAQR-----------VCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V
Sbjct: 459 YVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVL 518
Query: 634 PSASSHALPEHYRKLMTD 651
P+AS + LP Y+K + +
Sbjct: 519 PAASKNLLPTCYQKRLLE 536
>gi|348531416|ref|XP_003453205.1| PREDICTED: 5'-3' exoribonuclease 1 [Oreochromis niloticus]
Length = 1692
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 246/412 (59%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DN YLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNFYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A EE++++ ++ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTEFMARLQEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +L+ND W+ +KV LS PGEGEHKIM ++R + P +DPNTRHCLYGLDADLIM
Sbjct: 152 HNKLSNDKLWQNVKVYLSGHETPGEGEHKIMEFIRSENTKPNHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE +FS+LRE V R G+ +K + P
Sbjct: 212 LGLTSHEPNFSLLREEV---------------------------RFGGKKSQK--RITAP 242
Query: 299 KK-PYQFLHIWTLREYLDYEF-RIPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + N + DLE ++DD+I M F VGNDF+PH+P L
Sbjct: 243 EETTFHLLHLSLMREYIDYEFSELKNKMGSDYDLERVIDDWILMGFLVGNDFIPHLPNLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y +LGGYL + +LR E +++ + ++ F +
Sbjct: 303 INHDALPLLYKTYISVLPSLGGYLNENGHLNLRNFEKYLEKLAEFDREHFNE 354
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 93/135 (68%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y EG+ W++HYYY GV SW W+YPYHYAP+ SD++++ ++FELG PF PF QLL V
Sbjct: 459 YVEGIQWILHYYYHGVQSWSWYYPYHYAPYLSDIRNVSGLKLTFELGQPFMPFQQLLAVL 518
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS LPE YR LMT +SPI +YP DF+ D+NGK+ W+ + +PFIDE LL +
Sbjct: 519 PAASMELLPECYRHLMTSESSPIIGYYPLDFKTDLNGKQQEWEAVVLIPFIDERCLLAAM 578
Query: 694 KKIEHTLTEEEARRN 708
+ LT+EE RN
Sbjct: 579 EPCNSKLTKEEKARN 593
>gi|124506737|ref|XP_001351966.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
gi|23504994|emb|CAD51777.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
Length = 1311
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/477 (38%), Positives = 266/477 (55%), Gaps = 52/477 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTS--------------------- 39
MGVP FYRWL +YP + V E + + D +
Sbjct: 1 MGVPTFYRWLVTRYPKIAKAVYETRDSDVYSRRTKYDENGEYFKVHDLNDYVNNTDELHC 60
Query: 40 KPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLY 99
N NG +DN+YLDMNGIIH C H ++ + +E+F +F Y++RLF ++ P+KLLY
Sbjct: 61 SDNINGY-FDNMYLDMNGIIHLCSHSDNSKRAKSNEEIFLNVFLYVERLFDIIEPKKLLY 119
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNV 159
MAIDGVAP+AKMNQQRSRRF++ + L++ F E + +P ++ +DSNV
Sbjct: 120 MAIDGVAPKAKMNQQRSRRFKSISCSEIEKRAYLELKERFIAENKMVP--EETTYWDSNV 177
Query: 160 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 219
ITPGTEFM LSIAL+Y+I ++ ND W+ + VI SD+NV GEGEHKI ++++ QR P
Sbjct: 178 ITPGTEFMHELSIALKYFIEHKITNDEKWKNVVVIFSDSNVCGEGEHKIFNFIKSQRAQP 237
Query: 220 GYDPNTRHCLYGLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQP--GHLAAN 276
GYDPNTRH ++G+DADLIML+LA+HE +F ILRE++ P ++K + G L +
Sbjct: 238 GYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIDLDPKSEEKEKTKKKEYVGMLKSY 297
Query: 277 -----CEGKAKRKAGEFDEKGD----EVVVPKKP---------YQFLHIWTLREYL--DY 316
C AK++ F++ D V + K Q L + LREYL D
Sbjct: 298 DDLHFCTRYAKKEKKLFNKYNDPNYANVTISKNASLNYEYWNELQILDLTILREYLLKDL 357
Query: 317 EFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALG 376
F ++E +DDFIF+CFF GNDFLPH+P++ I G+I+ L+ +Y+K LG
Sbjct: 358 FFDTS-----FNMERCLDDFIFICFFCGNDFLPHLPSISIAGGSIDQLILLYQKVLPTLG 412
Query: 377 GYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVE 433
YL + +L+ +I + E F + ++ +R ++K +R V+
Sbjct: 413 DYLINEGSINLKSFTKYISFIAEVERETFVSQYDFKKKREKRELQQKDSLKRAKCVD 469
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 162/269 (60%), Gaps = 11/269 (4%)
Query: 487 SSGATIGAAIVEAENSFETDPQ-ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG--- 542
S+ T+ V ++S++ + + ++ EF LKE ++ ++ +NP+ED V+LG
Sbjct: 643 SNNDTLSNTEVLPKDSYDENKKLDDINEFNLLLKEAIKKANEC---ENPKED-VELGGDE 698
Query: 543 EPGW-KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
P + +YY+ KF+ + E+ KDVV +Y EGL WV+ YY++ W W+YPY+YA
Sbjct: 699 NPDIIRMKYYKSKFHLDDNDAIEDFIKDVVYKYVEGLAWVLAYYFQSCPMWHWYYPYYYA 758
Query: 602 PFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
P +SDL +D +FE P PF QLL V P+ SSH LP+ Y++LM +SPI DFYP
Sbjct: 759 PLSSDLI-VDNITFNFEKDEPLLPFEQLLCVLPANSSHCLPKMYKQLMLHKDSPIIDFYP 817
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 721
F+ + NGK+Y +Q I LPF+D+ R++ + + TL +E +RN + ++V +H
Sbjct: 818 HTFKEEQNGKKYKYQWIILLPFVDKERIIKHARPLHDTLNNDEKKRNRRGLNKIYVSSNH 877
Query: 722 PLSASIY-TLDEHCKQLKIKERVEVKERL 749
PLS +I ++ + K++K KE ++ ++ L
Sbjct: 878 PLSKTITKSIKNYLKEVKEKESLKNEDAL 906
>gi|301615368|ref|XP_002937144.1| PREDICTED: 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 1714
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/412 (41%), Positives = 248/412 (60%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRITEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPG EFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GEVLPTEAR---FDSNCITPGNEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + LS PGEGEHKIM ++R Q+ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVAIYLSGHETPGEGEHKIMEFIRSQKTKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HEVHFS+LRE V R G+ ++K V P
Sbjct: 212 LGLTSHEVHFSLLREEV---------------------------RFGGKKNQK--RVTAP 242
Query: 299 KKP-YQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + N FE D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 243 EETTFHLLHLSLMREYIDYEFSSLKNKISFEYDVERIIDDWILMGFLVGNDFIPHLPHLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y +GGY+ + +L +++ + ++ F +
Sbjct: 303 INHDALPLLYRTYISVLPTIGGYINENGYLNLYNFGKYLEKLSDFDREHFNE 354
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 100/163 (61%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + E D Y + + W++HYYY GV SW W+YPYHYAP+ S
Sbjct: 435 YKRTYYMSKMGVEVVSD--EFLADQAKCYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLS 492
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ ++F LG PF PF QLL V P+AS LP Y+ LM +SPI D+YP DF+
Sbjct: 493 DICNISHLKLTFNLGKPFMPFEQLLAVLPAASKDLLPLTYQNLMISSDSPIIDYYPQDFK 552
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ + +L EEE +RN
Sbjct: 553 TDLNGKQQEWEAVVLIPFIDEKRLLEAMVSCNRSLAEEEKKRN 595
>gi|212535156|ref|XP_002147734.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
gi|210070133|gb|EEA24223.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
Length = 1419
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 242/397 (60%), Gaps = 66/397 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLY DMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPSISQLIAEN--------RIP-----------EFDNLYFDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D +PT + D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-SDSDSPTHRMSEDQMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR++ DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRSALDA--EVAKEKAIAQGIEM------PKEDA--FDSNCITPGTEFMARLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 ISKKISEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ +F +LRE V T G+Q A++K+ E + +
Sbjct: 211 MLGLLSHDPYFCLLREEV-TFGRQ-------------------AQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELQLTTKSGFVYDMERIIDDFILMAFFVGNDFLPNLPH 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 390
+ I EGA+ L+ YK+ +GGY+ + +L+R+
Sbjct: 302 MHINEGALALMFTKYKEALPKMGGYINEYGSINLQRL 338
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK +YY EKF +E T+ + Y +GL WV+ YYY GV SW W++ YHYAP S
Sbjct: 516 WKNKYYMEKFGHGLEDEAAMTK--LTENYVQGLQWVLFYYYRGVVSWPWYFQYHYAPMIS 573
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+K NI F+LG PF+PF QL+GV P S +P Y LMT P SPI DFYP DFE
Sbjct: 574 DVKKGLGANIDFKLGQPFRPFQQLMGVLPDRSKKIVPTAYWDLMTSPESPIIDFYPRDFE 633
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFIDEARLL + EH LT EE RN + F
Sbjct: 634 LDMNGKKMEWEAVVKIPFIDEARLLPAMATREHLLTPEERARNEFGVTLKFT 685
>gi|410971335|ref|XP_003992125.1| PREDICTED: 5'-3' exoribonuclease 1 [Felis catus]
Length = 1672
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINENGHLNLPRFEKYLVKLSDFDREHF 351
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 82/114 (71%)
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +S
Sbjct: 420 YYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDS 479
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
PI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 480 PIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 533
>gi|363737031|ref|XP_422596.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Gallus gallus]
Length = 1736
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/409 (42%), Positives = 243/409 (59%), Gaps = 62/409 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP ++ V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSQVLKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKALEK-GEILPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ I V LS PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGITVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE HF++LRE V GK ++A +E
Sbjct: 212 LGLTTHEAHFALLREEV--------------------RFGGKKSQRACAPEETT------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L I
Sbjct: 246 ---FHLLHLSLMREYIDYEFSPVKDKISFDYDIEKIIDDWILMGFLVGNDFIPHLPHLHI 302
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
A+ LL Y LGGY+ + +L+R E ++ + ++ F
Sbjct: 303 NHDALPLLYRTYMAILPELGGYINENGHLNLKRFEKYLTRLSDFDREHF 351
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 113/186 (60%), Gaps = 3/186 (1%)
Query: 532 DNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
D PE+D + E +K YY K + + + D Y + + W++HYYY GV
Sbjct: 417 DEPEDDDLFETEFRQYKRTYYMTKMGIEVVSD--DFLADQAECYVQAIQWILHYYYHGVQ 474
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP Y+ LM
Sbjct: 475 SWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPRCYQHLMV 534
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
+SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ L EEE RRN
Sbjct: 535 SQDSPIIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMESCNKCLKEEEKRRNVH 594
Query: 711 MADMLF 716
A +++
Sbjct: 595 SACLMY 600
>gi|21755602|dbj|BAC04718.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 245/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T+ D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRTSDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
>gi|293349379|ref|XP_001069029.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
gi|293361286|ref|XP_217233.5| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
Length = 1723
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|74210743|dbj|BAE25024.1| unnamed protein product [Mus musculus]
Length = 778
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 245/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S + PGEGEHKIM ++R ++ PG+DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHDTPGEGEHKIMEFIRSEKAKPGHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|50949885|emb|CAH10490.1| hypothetical protein [Homo sapiens]
gi|119599378|gb|EAW78972.1| 5'-3' exoribonuclease 1, isoform CRA_b [Homo sapiens]
Length = 1694
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|346325316|gb|EGX94913.1| exonuclease Kem1, putative [Cordyceps militaris CM01]
Length = 1394
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/414 (42%), Positives = 247/414 (59%), Gaps = 67/414 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPPISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTF----DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C H +D TTF +E+F +F+YI+ LF ++PR+L +MAIDGVAPRAKMNQQR+
Sbjct: 42 NCTH-KDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPRQLFFMAIDGVAPRAKMNQQRA 100
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFR +A E E R++ +EG ++P + + FDSN ITPGT FMA LS LQY
Sbjct: 101 RRFR-------TALEVEMAREKAIKEGVEMPKE---EPFDSNCITPGTAFMAKLSRQLQY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+++ +++ D W+ +++LS VPGEGEHKIM Y+R ++ PGY+PN RHCLYGLDADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKSQPGYNPNVRHCLYGLDADL 210
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML L +H+ HFS+LRE V T G+ +K K+ E + +
Sbjct: 211 IMLGLLSHDPHFSLLREEV-TFGR-------------------ASKNKSKELEHQN---- 246
Query: 297 VPKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ LH+ +REYL+ EF + + E DLE ++DDFI M FFVGNDFLP++P
Sbjct: 247 -----FFLLHLCMVREYLEMEFQELKQTQDSGLEFDLERVIDDFILMAFFVGNDFLPNLP 301
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
L I EGA+ + +YK+ GGYL + +++R I +G E + F+
Sbjct: 302 GLHINEGALADMFEIYKRILPEEGGYLHENGVLNIKRALRMIAELGKVEIKQFE 355
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 102/176 (57%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
GWK +YY +KF + + + Y EGL WV+ YYY G+ SW WFY YHYAP
Sbjct: 512 GWKTKYYLQKFPEWESTAYADEQTALCENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLI 571
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD+ + FE G PFKP+ QL+GV P S +P Y LMT P SPI DFYP DF
Sbjct: 572 SDVAKGANAKLLFEKGQPFKPYEQLMGVLPDRSKKIVPTAYHDLMTSPASPIIDFYPRDF 631
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLS 720
E+DMNGK+ W+ + K+PFIDE RLL ++ L++EE RN + F S
Sbjct: 632 ELDMNGKKMDWEAVVKIPFIDEKRLLAAMETKNVLLSDEEKARNGFGVPLQFTYSS 687
>gi|344288974|ref|XP_003416221.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Loxodonta africana]
Length = 1706
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVHILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 432 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 489
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 490 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 549
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 550 TDLNGKQQEWEAVVLIPFIDEKRLLEAMESCNHSLKKEERKRN 592
>gi|110624792|ref|NP_061874.3| 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
gi|74714582|sp|Q8IZH2.1|XRN1_HUMAN RecName: Full=5'-3' exoribonuclease 1; AltName:
Full=Strand-exchange protein 1 homolog
gi|24474444|gb|AAN11306.1| DNA strand-exchange protein SEP1 [Homo sapiens]
gi|119599377|gb|EAW78971.1| 5'-3' exoribonuclease 1, isoform CRA_a [Homo sapiens]
gi|146327192|gb|AAI41556.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|261857762|dbj|BAI45403.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1706
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|302697115|ref|XP_003038236.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
gi|300111933|gb|EFJ03334.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
Length = 1480
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/257 (58%), Positives = 194/257 (75%), Gaps = 2/257 (0%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHP 61
GVPA +RWL++KYP +V VIEEEP I IP+D S NPNG+E+DNLYLDMNGI+HP
Sbjct: 10 GVPALFRWLSKKYPKIVQPVIEEEPRQIGDEVIPIDASGRNPNGVEFDNLYLDMNGIVHP 69
Query: 62 CFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRA 121
C HPE +PAP T +E+ +F+Y +R+ MVRPRKLL+MAIDGVAPRAKMNQQRSRRFRA
Sbjct: 70 CTHPEGKPAPETEEEMMVEIFNYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQRSRRFRA 129
Query: 122 SKDAADSAAEEERLRQEFEREGRKLPP--KSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
S++A + + ++ G++L K+ +DSN ITPGT FM +L+ +L+Y+
Sbjct: 130 SQEAQEKEDARAESLELWKSMGKELTDEMKNPKAAWDSNAITPGTPFMTLLANSLRYWTV 189
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++N DP W+ I+VI+SDA+VPGEGEHKIM ++R QR PG+DPNT H +YGLDADLIML
Sbjct: 190 QKMNEDPAWKGIQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTEHVIYGLDADLIML 249
Query: 240 ALATHEVHFSILREVVF 256
+LATHE HF +LRE VF
Sbjct: 250 SLATHEPHFRVLREDVF 266
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 588
+ D V+L EPG+KERYY+ KF + + EE RKDV +Y EGL WV+ YYY+G
Sbjct: 553 QADHVQLWEPGYKERYYKNKFGKEYSD--EEFRKDVTTKYMEGLAWVLQYYYQG 604
>gi|296227918|ref|XP_002759572.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Callithrix jacchus]
Length = 1694
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 246/410 (60%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISMDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ KA+R V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK-------------------KAQR-----------VCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQATCYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|380813906|gb|AFE78827.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRYGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 97/135 (71%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V
Sbjct: 459 YVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVL 518
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ +
Sbjct: 519 PAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAM 578
Query: 694 KKIEHTLTEEEARRN 708
+ H+L +EE +RN
Sbjct: 579 ETCNHSLKKEERKRN 593
>gi|119599379|gb|EAW78973.1| 5'-3' exoribonuclease 1, isoform CRA_c [Homo sapiens]
Length = 1693
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDE-RLLEAMETCNHSLKKEERKRN 592
>gi|110624787|ref|NP_001036069.1| 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
Length = 1693
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|380813908|gb|AFE78828.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRYGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|72391638|ref|XP_846113.1| 5'-3' exonuclease XRNA [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175631|gb|AAX69763.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei]
gi|70802649|gb|AAZ12554.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1418
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 183/438 (41%), Positives = 248/438 (56%), Gaps = 57/438 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW+AE+YP V+ + P V DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERYPSVITPFRDFPPPV--------------------DNLYLDMNGIIH 40
Query: 61 PCFHPEDRPA---PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C HP D A T + + MF Y+++LF ++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDADATHKAPTEKAMVEAMFSYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R+R S E R+E G +LP ++D VFDSN ITPGT+FM +S QY+
Sbjct: 101 RYR-------SGYEMMVAREEALSRGEELPEEAD--VFDSNCITPGTDFMVRISEHFQYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I ++++ DP W+ VI S + PGEGEHKI+ ++R ++ P Y PN HC+YGLDADL+
Sbjct: 152 IMMKMSTDPAWQNCSVIYSGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMYGLDADLV 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
MLALATHE HF +LREVV F GQ E + R+ E DE D +V
Sbjct: 212 MLALATHEPHFVLLREVV--------TFGFGQ--------ESRRAREQREQDES-DGIVA 254
Query: 298 PK---KPYQFL--HIWTLREYLDYEFR---IPNPPFEIDLECIVDDFIFMCFFVGNDFLP 349
K KP +F+ H+ LR+YLD E R P DLE +VDDF+ MCFF+GNDFLP
Sbjct: 255 DKSYQKPDEFVLFHVNVLRDYLDLEVRERLGDKLPTNYDLERVVDDFVLMCFFIGNDFLP 314
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
+PTL I +G++ ++ +Y + YLTD + R VE ++Q + E + R
Sbjct: 315 SIPTLGIHDGSLVQMLDLYAQRVLLAHTYLTDMGRIDWRAVEGWLQGLADLEFTTIKARE 374
Query: 410 RLHQRHAERIKREKAQAR 427
Q + R+ ++ + R
Sbjct: 375 AQEQEYQRRMAQQCGEHR 392
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 100/175 (57%), Gaps = 3/175 (1%)
Query: 546 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K+RYY +K A + + E + L Y EG+ WV+ YYY+G SW+W++P+HYAP A
Sbjct: 407 YKDRYYRDKHQFAMGWDPQGEDMAKLRLHYIEGIMWVIGYYYQGPPSWKWYFPHHYAPMA 466
Query: 605 SDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
SDL +L + F+ G PF P QLL V P S ++P Y L+ NSP++ ++P
Sbjct: 467 SDLVNLPAVAACVKFDPGKPFLPHQQLLAVLPPMSYRSMPRAYWPLLRSKNSPLARYFPE 526
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
++D G R W+G+ +PFI+E LL + ++ +T EE + N + L+
Sbjct: 527 KLQIDREGTRAPWEGVVLIPFIEERTLLAAYETVQDRVTPEERKNNRLGLPTLYA 581
>gi|392342051|ref|XP_003754494.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
gi|392350274|ref|XP_003750610.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
Length = 1706
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|261329673|emb|CBH12655.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1418
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 183/438 (41%), Positives = 248/438 (56%), Gaps = 57/438 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW+AE+YP V+ + P V DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERYPSVITPFRDFPPPV--------------------DNLYLDMNGIIH 40
Query: 61 PCFHPEDRPA---PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C HP D A T + + MF Y+++LF ++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDADATHKAPTEKAMVEAMFSYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R+R S E R+E G +LP ++D VFDSN ITPGT+FM +S QY+
Sbjct: 101 RYR-------SGYEMMVAREEALSRGEELPEEAD--VFDSNCITPGTDFMVRISEHFQYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I ++++ DP W+ VI S + PGEGEHKI+ ++R ++ P Y PN HC+YGLDADL+
Sbjct: 152 IMMKMSTDPAWQNCSVIYSGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMYGLDADLV 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
MLALATHE HF +LREVV F GQ E + R+ E DE D +V
Sbjct: 212 MLALATHEPHFVLLREVV--------TFGFGQ--------ESRRAREQREQDES-DGIVA 254
Query: 298 PK---KPYQFL--HIWTLREYLDYEFR---IPNPPFEIDLECIVDDFIFMCFFVGNDFLP 349
K KP +F+ H+ LR+YLD E R P DLE +VDDF+ MCFF+GNDFLP
Sbjct: 255 DKSYQKPDEFVLFHVNVLRDYLDLEVRERLGDKLPTNYDLERVVDDFVLMCFFIGNDFLP 314
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
+PTL I +G++ ++ +Y + YLTD + R VE ++Q + E + R
Sbjct: 315 SIPTLGIHDGSLVQMLDLYAQRVLLAHTYLTDMGRIDWRAVEGWLQGLADLEFTTIKARE 374
Query: 410 RLHQRHAERIKREKAQAR 427
Q + R+ ++ + R
Sbjct: 375 AQEQEYQRRMAQQCGEHR 392
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 3/175 (1%)
Query: 546 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K+RYY +K A + + E + L Y EG+ WV+ YYY+G SW+W++P+HYAP A
Sbjct: 407 YKDRYYRDKHQFAMGWDPQGEDMAKLRLHYIEGIMWVIGYYYQGPPSWKWYFPHHYAPMA 466
Query: 605 SDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
SDL +L + F+ G PF P QLL V P S ++P Y L+ NSP++ ++P
Sbjct: 467 SDLVNLPAVAACVKFDPGKPFLPHQQLLAVLPPMSYRSMPRAYWPLLRSKNSPLARYFPE 526
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
++D G R W+G+ +PFI+E LL + ++ +T EE N + L+
Sbjct: 527 KLQIDREGTRAPWEGVVLIPFIEERTLLAAYETVQDRVTPEERENNRLGLPTLYA 581
>gi|383419335|gb|AFH32881.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|293349383|ref|XP_002727167.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
gi|293361290|ref|XP_002730003.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|149018866|gb|EDL77507.1| rCG25308 [Rattus norvegicus]
Length = 1685
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|402861336|ref|XP_003895053.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Papio anubis]
Length = 1694
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|297286724|ref|XP_001112265.2| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Macaca mulatta]
Length = 1693
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|296227920|ref|XP_002759573.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Callithrix jacchus]
Length = 1706
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/412 (41%), Positives = 247/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISMDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ KA+R V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK-------------------KAQR-----------VCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQATCYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|293349381|ref|XP_002727166.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|293361288|ref|XP_002730002.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
Length = 1686
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|383419337|gb|AFH32882.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|338714846|ref|XP_001917535.2| PREDICTED: 5'-3' exoribonuclease 1 [Equus caballus]
Length = 1726
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ +I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISALSIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ ++L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNYSLKKEERKRN 593
>gi|402861338|ref|XP_003895054.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Papio anubis]
Length = 1706
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|109048976|ref|XP_001112305.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Macaca mulatta]
gi|355747003|gb|EHH51617.1| hypothetical protein EGM_11029 [Macaca fascicularis]
Length = 1706
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLRIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|297672155|ref|XP_002814175.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pongo abelii]
Length = 1693
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTNEDSPIIEYYPLDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|440911813|gb|ELR61446.1| 5'-3' exoribonuclease 1 [Bos grunniens mutus]
Length = 1727
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A EE++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDIVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|345789293|ref|XP_534294.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Canis lupus
familiaris]
Length = 1692
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHETHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSELKAKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERKRN 593
>gi|195133694|ref|XP_002011274.1| GI16439 [Drosophila mojavensis]
gi|193907249|gb|EDW06116.1| GI16439 [Drosophila mojavensis]
Length = 1816
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------SIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +++YID+LF +++P+KL ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDSNIHFHLEETQIFQDIYNYIDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++++A ++ E + R+ K + + FDSN ITPGTEFM L L+ ++
Sbjct: 102 FRSAREA-----------EQLEAKARQRGEKREHERFDSNCITPGTEFMVRLQAGLRCFL 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ DP W+K +VILS PGEGEHKIM Y+R + P +DPNTRHCLYGLDADLI+
Sbjct: 151 RTKISQDPLWQKCRVILSGQETPGEGEHKIMDYIRYMKAQPTFDPNTRHCLYGLDADLII 210
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE+HF +LRE V +F V
Sbjct: 211 LGLCTHELHFVVLREEV-------------------------------KFGRNVKRTSVE 239
Query: 299 KKPYQFLHIWTLREYLDYEFR-IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ LREYL+ EF + P ++D+ ++DD++ M F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFHELSTPEQKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
A+ LL Y + ++ LGG + + K +L R++ F+ A+ E ++F++ +
Sbjct: 300 SNALPLLYKTYIRIYKQLGGNINEHGKLNLDRLQQFLHALSEVELQLFEEHS 351
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K YY KF E E+ ++ Y + WV+ YYY GV SW W+YP+HYAPF
Sbjct: 416 NYKRNYYRNKFKN---EMHEDLISELSYHYISAIQWVLDYYYRGVQSWDWYYPFHYAPFI 472
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SDL ++ ++F++G PF PF QLL V P+AS + LP Y LM PNSP+++FYPT+F
Sbjct: 473 SDLNNIKNTKVNFKMGKPFLPFQQLLAVLPAASVNLLPMAYHDLMLKPNSPLAEFYPTEF 532
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
E D+NGK++ W+ + +PFI+E RLL + E L+ EE RN
Sbjct: 533 ESDLNGKKHDWEAVVLIPFIEEKRLLSAMADCEPQLSVEERERN 576
>gi|406861681|gb|EKD14734.1| exonuclease II Exo2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1395
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/412 (41%), Positives = 245/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H +D T +++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTDDAMFRMTEEQMFIAIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E R + +EG+++P + + FDSN ITPGT FM L+ L+Y+I
Sbjct: 102 FRTALDA-------ENARDKAIKEGKEMPKE---EAFDSNAITPGTAFMHKLTQQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ ++V+LS VPGEGEHKIM Y+RL + P YD N RHCLYGLDADLIM
Sbjct: 152 NKKVSEDTDWQGVEVVLSGHEVPGEGEHKIMEYIRLAKAQPDYDANIRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q K K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQSKA-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ +H+ +REYL+ EF+ P DLE I+DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLMHLCIVREYLELEFQELKEPGVLSASFDLERIIDDFILMAFFVGNDFLPNLPNL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
I EGA+ L+ VYK GG++ +G +++R+ ++ + E R F+
Sbjct: 303 HINEGALALMFKVYKTVLPKAGGFINEGGVINMQRLAMLLEELSHVEYRFFE 354
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK+ YY+ KF E E T+ + Y +GL WV+HYYY GV SW W+Y YHY+P S
Sbjct: 506 WKDTYYKGKFEWDRNNETELTK--LCENYVQGLQWVLHYYYRGVVSWPWYYQYHYSPMIS 563
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ +++F+LG PF P+ QL+GV P S +P Y LMT+PNSPI DFYP DFE
Sbjct: 564 DVIKGLNADVNFKLGQPFHPYEQLMGVLPDRSKTIVPSVYHDLMTNPNSPIIDFYPRDFE 623
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFIDE RLL + L+E+E RN + F
Sbjct: 624 LDMNGKKMEWEAVVKIPFIDEKRLLAAMAPKYLLLSEDEKFRNEFGVTVKFT 675
>gi|81861755|sp|P97789.1|XRN1_MOUSE RecName: Full=5'-3' exoribonuclease 1; Short=mXRN1; AltName:
Full=Protein Dhm2; AltName: Full=Strand-exchange protein
1 homolog
gi|1894791|emb|CAA62819.1| 5'-3' exonuclease [Mus musculus]
Length = 1719
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|296491011|tpg|DAA33109.1| TPA: 5'-3' exoribonuclease 1 isoform 1 [Bos taurus]
Length = 1690
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 243/412 (58%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A EE++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|115495455|ref|NP_036046.2| 5'-3' exoribonuclease 1 [Mus musculus]
gi|162318350|gb|AAI56977.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|162319526|gb|AAI56134.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1723
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|297672153|ref|XP_002814174.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pongo abelii]
Length = 1706
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTNEDSPIIEYYPLDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|114589588|ref|XP_001161640.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan troglodytes]
Length = 1705
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|332232376|ref|XP_003265382.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Nomascus leucogenys]
Length = 1693
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKREERKRN 593
>gi|332232374|ref|XP_003265381.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Nomascus leucogenys]
Length = 1706
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKREERKRN 593
>gi|397512468|ref|XP_003826567.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan paniscus]
Length = 1705
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|329664920|ref|NP_001192964.1| 5'-3' exoribonuclease 1 [Bos taurus]
gi|296491012|tpg|DAA33110.1| TPA: 5'-3' exoribonuclease 1 isoform 2 [Bos taurus]
Length = 1703
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 243/412 (58%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A EE++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EEKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|410341471|gb|JAA39682.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|410266384|gb|JAA21158.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|332818029|ref|XP_516791.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan troglodytes]
Length = 1692
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|397512470|ref|XP_003826568.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan paniscus]
Length = 1693
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|2281015|dbj|BAA21563.1| Dhm2 protein [Mus musculus]
Length = 1687
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHFSE 353
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|73990326|ref|XP_852437.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Canis lupus
familiaris]
Length = 1705
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHETHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSELKAKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERKRN 593
>gi|410266386|gb|JAA21159.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1706
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|1894792|emb|CAA62820.1| 5'-3' exonuclease [Mus musculus]
Length = 1706
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|148688999|gb|EDL20946.1| 5'-3' exoribonuclease 1 [Mus musculus]
Length = 1685
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E + Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLANQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++ + I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|34365218|emb|CAE45950.1| hypothetical protein [Homo sapiens]
Length = 1706
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 244/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHP--EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP +D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNGDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|51476722|emb|CAH18332.1| hypothetical protein [Homo sapiens]
Length = 1694
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++ + E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIEKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLEYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|156097196|ref|XP_001614631.1| exoribonuclease [Plasmodium vivax Sal-1]
gi|148803505|gb|EDL44904.1| exoribonuclease, putative [Plasmodium vivax]
Length = 1353
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 186/496 (37%), Positives = 275/496 (55%), Gaps = 66/496 (13%)
Query: 1 MGVPAFYRWLAEKYPLVV--------ADVIEEEPVVIDG-----------------VKIP 35
MGVP FYRWL +YP + +DV + DG ++P
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIRDGHRDGHRDGHRDGEGKATYRVP 60
Query: 36 -----VDTS-----KPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYI 85
V+ + N NG +DNLYLDMNGIIH C H ++ + +E+F +F YI
Sbjct: 61 DLSDYVNNTDETHCSDNINGY-FDNLYLDMNGIIHLCSHSDNSKRAKSNEEIFLNIFLYI 119
Query: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRK 145
+RLF ++ P+KLLYMAIDGVAP+AKMNQQRSRRF++ + +LR++F E R
Sbjct: 120 ERLFDIIEPKKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERNAYIQLREKFLSENRV 179
Query: 146 LPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGE 205
+P + +DSN+ITPGT+FM LS+AL+Y++ ++ ND W+ I VI SDANV GEGE
Sbjct: 180 VP--EEFTFWDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDANVCGEGE 237
Query: 206 HKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQ----- 260
HKI ++++ QR PGYDPNTRH ++G+DADLIML+LA+HE +F ILRE++ +
Sbjct: 238 HKIFNFIKSQRAQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEKV 297
Query: 261 QDKCFL----CGQPGHLAANCEGKAKRKAGEFDE-------KGDEVVVPKKPY---QFLH 306
Q+K F+ Q L K KR ++++ + ++ + + Q L
Sbjct: 298 QNKDFVGMLKSKQDLPLCTTHMRKTKRMYTKYNDPHYANISRSHNCLINSENWNELQILD 357
Query: 307 IWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 366
+ LREYL +F + +LE +DDFIF+CF GNDFLPH+P++ I G+I+ L+
Sbjct: 358 LTILREYLSKDFFFDST---YNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVL 414
Query: 367 VYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI------FQKRARLHQRHAERIK 420
+Y+K LG YL + K +L+ ++ + E F+K+ + + +K
Sbjct: 415 LYQKVLPVLGDYLINEGKINLKPFSKYVSFIAEVERETFISQYDFKKKREKRDQQKDSLK 474
Query: 421 REKAQARRGDDVEPLA 436
R K + D +A
Sbjct: 475 RVKCTDEQNDGSGNIA 490
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 144/240 (60%), Gaps = 10/240 (4%)
Query: 504 ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKE----RYYEEKFNAKT 559
ET + EF LKE ++ ++ +NP+ED V+LG E +YY+ KF+
Sbjct: 657 ETKRINDINEFNMLLKEAIKKANEC---ENPKED-VELGGDENPELIRIKYYKSKFHLDE 712
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ ++ K+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL +D N +F+
Sbjct: 713 TDYVDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVNFTFQK 771
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
P P QLL V PS SSH LP+ YR+LM +SPI DFYP F+ + NGK+Y +Q +
Sbjct: 772 DEPILPLEQLLCVLPSNSSHCLPKGYRELMVRHDSPIIDFYPKTFKEEENGKKYKYQWVI 831
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIY-TLDEHCKQLK 738
LPF+D+ R++ +++ TLTEEE +RN + +++ SH LS I ++ + K++K
Sbjct: 832 LLPFVDKERIIKHARELNDTLTEEEKKRNRRGMNKIYMNCSHALSKQITKSIKAYVKEMK 891
>gi|350591614|ref|XP_003483306.1| PREDICTED: 5'-3' exoribonuclease 1 [Sus scrofa]
Length = 1704
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|354466144|ref|XP_003495535.1| PREDICTED: 5'-3' exoribonuclease 1 [Cricetulus griseus]
gi|344244388|gb|EGW00492.1| 5'-3' exoribonuclease 1 [Cricetulus griseus]
Length = 1726
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREHF 351
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 112/182 (61%), Gaps = 2/182 (1%)
Query: 527 DAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY 586
D F + ++D + +K YY K + E D Y + + W++HYYY
Sbjct: 414 DNFEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--EFLADQAACYVQAIQWILHYYY 471
Query: 587 EGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V PSAS + LP Y+
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKNLLPTCYQ 531
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +
Sbjct: 532 HLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 591
Query: 707 RN 708
RN
Sbjct: 592 RN 593
>gi|154331043|ref|XP_001561961.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059283|emb|CAM36982.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|449310628|gb|AGE92541.1| 5'-3' exonuclease [Leishmania braziliensis]
gi|449310652|gb|AGE92553.1| 5'-3' exonuclease [Leishmania braziliensis]
Length = 1513
Score = 315 bits (806), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 183/437 (41%), Positives = 250/437 (57%), Gaps = 60/437 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW AE++P ++ + P V DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPV--------------------DNLYLDINGIIH 40
Query: 61 PCFHPED----RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C HP D R +PT E+ Q MF Y+++LF ++PRK +A+DGVAPRAKMNQQR
Sbjct: 41 NCTHPNDVDATRRSPTE-KEMIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQ 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR+RA + A EE L G ++P + D +FDSN ITPGT FM +S QY
Sbjct: 100 RRYRAGYEMM--VAREEALAM-----GEEVPEEKD--MFDSNCITPGTPFMVRVSTEFQY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I ++L+ DP W++ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+YGLDADL
Sbjct: 151 FITMKLSTDPAWQRCEIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 237 IMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
+MLALATHE HF +LREVV F PG + + + +G K KA K DE
Sbjct: 211 VMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGLVKDKA---YHKADEF 262
Query: 296 VVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
V+ LHI R+YL E + +ID E I+DDF+FMCFF+GNDFLP +
Sbjct: 263 VL-------LHISVFRDYLQLEVKDYLAKSKSSTKIDFERIIDDFVFMCFFIGNDFLPTL 315
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
PT+ I +G+I +L+ +Y + YLT + R E ++ VG E F+ L
Sbjct: 316 PTIGINDGSIPVLLRLYVDNLLSKNRYLTHKGEIDWRNAEVWLNEVGKLE---FET---L 369
Query: 412 HQRHAERIKREKAQARR 428
+R E + +K +ARR
Sbjct: 370 RRRQQEEAEYQKNRARR 386
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 104/169 (61%), Gaps = 9/169 (5%)
Query: 546 WKERYYEEK--FNAKTPEEREETRKDVVLR--YTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
+K+RYY EK F E+ R+ LR Y EGL WVMHYYY+GV SW+WF+P++YA
Sbjct: 406 FKQRYYGEKHGFVGGWDANSEDMRR---LREHYVEGLMWVMHYYYQGVPSWKWFFPHYYA 462
Query: 602 PFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
P ASDL +L + ++FE+G PF+P QLL V P S ++P+ Y L+ P+SP++ +
Sbjct: 463 PMASDLVNLPGISARVTFEVGKPFQPHQQLLAVLPPMSYLSMPKAYWSLLRSPSSPLAKY 522
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
P +D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 523 LPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQQNVSPEDAANN 571
>gi|291399909|ref|XP_002716613.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Oryctolagus
cuniculus]
Length = 1690
Score = 315 bits (806), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 567
QEN + A K + D + ++D + +K YY K + +
Sbjct: 393 QENSICWAALDKNEVVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFL 450
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
D Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF
Sbjct: 451 ADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFE 510
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE
Sbjct: 511 QLLAVLPAASKNLLPACYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEK 570
Query: 688 RLLDEVKKIEHTLTEEEARRN 708
RLL+ ++ H+L +EE +RN
Sbjct: 571 RLLEAMEACNHSLKKEERKRN 591
>gi|350591616|ref|XP_003132505.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Sus scrofa]
Length = 1691
Score = 315 bits (806), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|291399905|ref|XP_002716611.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Oryctolagus
cuniculus]
Length = 1727
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 567
QEN + A K + D + ++D + +K YY K + +
Sbjct: 393 QENSICWAALDKNEVVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFL 450
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
D Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF
Sbjct: 451 ADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFE 510
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE
Sbjct: 511 QLLAVLPAASKNLLPACYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEK 570
Query: 688 RLLDEVKKIEHTLTEEEARRN 708
RLL+ ++ H+L +EE +RN
Sbjct: 571 RLLEAMEACNHSLKKEERKRN 591
>gi|432915339|ref|XP_004079186.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Oryzias latipes]
Length = 1689
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/412 (41%), Positives = 243/412 (58%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ ++ G LP ++ FDSN ITPGT+FMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +L+ D W +KV LS PGEGEHKIM ++R + + P +DPNTRHCLYGLDADLIM
Sbjct: 152 HNKLSTDKLWHNVKVYLSGHETPGEGEHKIMEFIRSENSKPSHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V R G+ +K + P
Sbjct: 212 LGLTSHEPHFSLLREEV---------------------------RXGGKKSQK--RITAP 242
Query: 299 KKP-YQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF DLE I+DD+I M F VGNDF+PH+P L
Sbjct: 243 EETTFHLLHLSLMREYIDYEFSWLKNHLGSAYDLERIIDDWILMGFLVGNDFIPHLPNLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ +L Y +LGGYL + +L+ E +++ + ++ F +
Sbjct: 303 INHDALPMLYKTYISVLPSLGGYLNENGHLNLKNFEKYMEKLSEFDREHFNE 354
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 96/135 (71%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y EG+ W++HYYY GV SW W+YPYHYAPF SD++++ ++FELG PF PF QLL V
Sbjct: 459 YVEGIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISDLKLTFELGEPFMPFQQLLAVL 518
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS LPE YR LMT NSPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL +
Sbjct: 519 PAASMGLLPECYRHLMTSENSPIIEYYPVDFKTDLNGKQQEWEAVVLIPFIDEKRLLAAM 578
Query: 694 KKIEHTLTEEEARRN 708
+ H LT+EE RN
Sbjct: 579 EPYNHKLTKEEKDRN 593
>gi|291399907|ref|XP_002716612.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Oryctolagus
cuniculus]
Length = 1702
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 243/412 (58%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR 567
QEN + A K + D + ++D + +K YY K + +
Sbjct: 393 QENSICWAALDKNEVVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSD--DFL 450
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFN 627
D Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF
Sbjct: 451 ADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFE 510
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QLL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE
Sbjct: 511 QLLAVLPAASKNLLPACYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEK 570
Query: 688 RLLDEVKKIEHTLTEEEARRN 708
RLL+ ++ H+L +EE +RN
Sbjct: 571 RLLEAMEACNHSLKKEERKRN 591
>gi|29126940|gb|AAH48104.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMAKLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
>gi|89269888|emb|CAJ83489.1| 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 385
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/412 (41%), Positives = 250/412 (60%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRITEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GEVLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + LS PGEGEHKIM ++R Q+ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVAIYLSGHETPGEGEHKIMEFIRSQKTKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HEVHFS+LRE V G++++ KR V P
Sbjct: 212 LGLTSHEVHFSLLREEVRFGGKKNQ------------------KR-----------VTAP 242
Query: 299 KKP-YQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + N FE D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 243 EETTFHLLHLSLMREYIDYEFSSLKNKISFEYDVERIIDDWILMGFLVGNDFIPHLPHLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y +GGY+ + +L +++ + ++ F +
Sbjct: 303 INHDALPLLYRTYISVLPTIGGYINENGYLNLYNFGKYLEKLSDFDREHFNE 354
>gi|426219417|ref|XP_004003922.1| PREDICTED: 5'-3' exoribonuclease 1 [Ovis aries]
Length = 1702
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 243/412 (58%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPAEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW WFYPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 491 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSDDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|334347265|ref|XP_003341907.1| PREDICTED: 5'-3' exoribonuclease 1 [Monodelphis domestica]
Length = 1713
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRAAKEA------EDKIKKALEK-GEILPSEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++++++D W+ + + LS PGEGEHKIM ++R ++ P +DPN RHCLYGLDADLIM
Sbjct: 152 NMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHESHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHF 351
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 526 SDAFNSDNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
S + D PE+D + E +K YY K + + + D Y + + W++HY
Sbjct: 411 SKSVIEDEPEDDDLFETEFRQYKRTYYMTKMGVEIVSD--DFLADQAECYVQAIQWILHY 468
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY GV SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP
Sbjct: 469 YYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPGC 528
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
Y+ LMT SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE
Sbjct: 529 YQHLMTSEESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHKYLREEE 588
Query: 705 ARRN 708
+RN
Sbjct: 589 EKRN 592
>gi|71052193|gb|AAH39314.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 244/412 (59%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
>gi|431899770|gb|ELK07717.1| 5'-3' exoribonuclease 1 [Pteropus alecto]
Length = 1742
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+L+++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NLKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE FS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAQFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSVLKDKITFQYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 432 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 489
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 490 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTREDSPIIEYYPPDFK 549
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L EE +RN
Sbjct: 550 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKTEERKRN 592
>gi|340506425|gb|EGR32559.1| hypothetical protein IMG5_077960 [Ichthyophthirius multifiliis]
Length = 1187
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 206/713 (28%), Positives = 345/713 (48%), Gaps = 132/713 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FY WL+ +YPL+V + + + +P D YLDMNG+I+
Sbjct: 1 MGVPGFYSWLSRRYPLIVNQLNSK-------LDVPY-----------IDCFYLDMNGLIY 42
Query: 61 PCFHPEDRP-----APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
C ED E+F +F+YID + +V+P+K+LY+ +DG APRAK NQQR
Sbjct: 43 KCTKEEDTVFKDLLLQKNMQEIFTLIFNYIDEMVNLVQPKKVLYLFLDGPAPRAKQNQQR 102
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
+RRF ++K D L + G +++Q +N I+ GT FM L+ +Q
Sbjct: 103 TRRFLSAKSHKD-------LNNSLKNCG----ILAENQTMQNNAISTGTTFMHELNQQIQ 151
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
+YI + DP W+ ++V S +NVPGEGEHKI++++ + YDP+T HC+YG+DAD
Sbjct: 152 FYIKNKFKQDPQWKNLEVFFSGSNVPGEGEHKIINFMHQYCSSDNYDPSTTHCIYGVDAD 211
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML L+TH + SILRE + H+ N AKR+
Sbjct: 212 LIMLGLSTHIKYVSILRE---------------EMRHI-PNISKAAKRE----------- 244
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPN---PPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ +Q +++ +REYLD E++ + D+E I+DDF+ +CFF+GNDF+P +
Sbjct: 245 -IQINQFQIIYLNIVREYLDLEYKQLQGEMKNLKYDIENIIDDFLLICFFIGNDFIPRLY 303
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLH 412
IREG +L+ +YK + YL + + + + I+ + +YE +A
Sbjct: 304 CFNIREGQFEILIQIYKNYIKEAKEYLNNMGYINWKGMYELIKQISNYEKEFIGDKADEC 363
Query: 413 QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
+ R + + + G+D F+ + + +Q+E + +
Sbjct: 364 TKEYNR----QLKGQEGED--------------NFNVDDINKDKESNNNKQNENTFQQEY 405
Query: 473 GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD 532
I + +N F+ +E K F ++ L ++D F +
Sbjct: 406 D-------------------NIIIDQQKNVFKEINKEKK--FLEDIQILYNTEADGFQA- 443
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAK-TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 591
+ YY+EK + + + +++ +Y EGL +V+ YYY+GV S
Sbjct: 444 --------------RTYYYKEKLQLDFSNSQHFKVLDNLITKYIEGLQFVLLYYYKGVPS 489
Query: 592 WQWFYPYHYAPFASDLKDLDQF-------NISFELGHPFKPFNQLLGVFPSASSHALPEH 644
W W+YP++YAP ++D+ ++ I F+L P++P QL+ + ++ LP
Sbjct: 490 WSWYYPFYYAPMSADISLYIEYKQSILSQTIKFDLSQPYQPMKQLMCIIHPENASLLPPK 549
Query: 645 YRKLMTD-PNSPIS---DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
+L+TD NSP+ D+YP ++ +D G ++ + I LPF+ E L+++V
Sbjct: 550 IAQLLTDQTNSPLRNPIDYYPEEYRIDPYGGVFAHEYIVVLPFM-EQELIEKV 601
>gi|126338146|ref|XP_001364729.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Monodelphis
domestica]
Length = 1700
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 243/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRAAKEA------EDKIKKALEK-GEILPSEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++++++D W+ + + LS PGEGEHKIM ++R ++ P +DPN RHCLYGLDADLIM
Sbjct: 152 NMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHESHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFDREHF 351
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 526 SDAFNSDNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
S + D PE+D + E +K YY K + + + D Y + + W++HY
Sbjct: 411 SKSVIEDEPEDDDLFETEFRQYKRTYYMTKMGVEIVSD--DFLADQAECYVQAIQWILHY 468
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY GV SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP
Sbjct: 469 YYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPGC 528
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
Y+ LMT SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE
Sbjct: 529 YQHLMTSEESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHKYLREEE 588
Query: 705 ARRN 708
+RN
Sbjct: 589 EKRN 592
>gi|242792196|ref|XP_002481904.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
gi|218718492|gb|EED17912.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
Length = 1417
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 242/397 (60%), Gaps = 66/397 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLY DMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPSISQLIAEN--------RIP-----------EFDNLYFDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D +PT + D++F +F+YI+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-SDSDSPTHRMSEDQMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR++ DA A+E+ + Q E PK D+ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRSALDA--EVAKEKAIAQGIEM------PKEDA--FDSNCITPGTEFMARLTKQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ D W+ + ++LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLI
Sbjct: 151 ISKKISEDVDWQGVDIVLSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ +F +LRE V T G+Q A++K+ E + +
Sbjct: 211 MLGLLSHDPYFCLLREEV-TFGRQ-------------------AQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ I + + D+E I+DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLLHLCIVREYLELEFQELKAIKDSSIDFDMERIIDDFILMAFFVGNDFLPNLPH 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 390
+ I EGA+ L+ YK+ +GGY+ + +L+R+
Sbjct: 302 MHINEGALALMFTKYKEALPKMGGYINEYGTINLQRL 338
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK +YY EKF +E T+ + Y +GL WV+ YYY GV SW W++ YHYAP S
Sbjct: 516 WKNKYYMEKFGHGLEDEAAMTK--LTENYVQGLQWVLFYYYRGVVSWPWYFQYHYAPMIS 573
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+K NI F+LG PF+PF QL+GV P S +P Y LMT P+SPI DFYP DFE
Sbjct: 574 DVKKGLGANIDFKLGQPFRPFQQLMGVLPDRSKKIVPPAYWDLMTSPDSPIIDFYPRDFE 633
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFIDE RLL + EH LT EE RN + F
Sbjct: 634 LDMNGKKMEWEAVVKIPFIDEKRLLPAMASREHLLTPEERGRNEFGVTLKFT 685
>gi|426342416|ref|XP_004037841.1| PREDICTED: 5'-3' exoribonuclease 1-like [Gorilla gorilla gorilla]
Length = 1432
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 242/410 (59%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKMKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 351
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 433 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 490
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT+ +SPI ++YP DF+
Sbjct: 491 DIQNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFK 550
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 551 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 593
>gi|444322153|ref|XP_004181732.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
gi|387514777|emb|CCH62213.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
Length = 1546
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 248/414 (59%), Gaps = 65/414 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGNQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPTTF----DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C H D + T +EVF +F YID LF+ ++P++ YMAIDGVAPRAKMNQQR+
Sbjct: 42 TCTHSNDDSSDITKRLSEEEVFAKIFTYIDHLFMTIKPKQTFYMAIDGVAPRAKMNQQRA 101
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFR + DA E+ Q+ EG ++P + FDSN ITPGTEFMA L+ L+Y
Sbjct: 102 RRFRTAMDA-------EKALQKAIEEGTEIPK---GEPFDSNSITPGTEFMAKLTKNLKY 151
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+IH +++ND W ++++ S VPGEGEHKIM Y+R R+ GY+PNTRHC+YGLDADL
Sbjct: 152 FIHDKISNDSNWRNVEIVFSGHEVPGEGEHKIMDYIRTIRSQEGYNPNTRHCIYGLDADL 211
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L+TH HF++LRE E K R++G+
Sbjct: 212 IILGLSTHAPHFALLRE------------------------EVKFGRRSGQ------TPA 241
Query: 297 VPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + + LH+ LREYL+ EF FE + E ++DDFI + F +GNDFLP++P L
Sbjct: 242 LENQNFFLLHLSLLREYLELEFENIADELQFEYNFERVLDDFILILFVIGNDFLPNLPDL 301
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
+ +GA +L+ +K+ L GY+ + K +L+R++ +++ + +E F+++
Sbjct: 302 HLNKGAFPVLLQTFKEALLHLDGYINEFGKINLQRLKIWLEYLTQFELMNFEQK 355
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 118/224 (52%), Gaps = 15/224 (6%)
Query: 521 LLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEK--FNAKTPEEREETRKDVVLRYTEGL 578
L+ D+S+ ED+ K WK YY++K F T E +++ +K + Y EGL
Sbjct: 520 LVDDQSELDREQQVYEDRFK----KWKNEYYKDKLQFTTNTDEGKQQLKK-LSCDYVEGL 574
Query: 579 CWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASS 638
WV+ YYY+G SW W+YP+HY+P SDL I FE PF PF QL+ V P S
Sbjct: 575 QWVLFYYYKGCQSWSWYYPHHYSPRISDLILGLHQVIDFEKSVPFTPFQQLMAVLPERSK 634
Query: 639 HALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEH 698
+ +P R LM + NS I DFYP + ++D NGK W+ + L FIDE RL+D ++
Sbjct: 635 NLIPVCLRPLMYEENSKIIDFYPHEVKLDKNGKTAEWEAVVLLSFIDEKRLIDAMEPYLS 694
Query: 699 TLTEEEARRNSIMADMLFV-------LLSHPLSASIYTLD-EHC 734
L+ EE RNS ++ F + PLS L+ HC
Sbjct: 695 KLSPEEKIRNSFGRNLTFTFNPQIDEVYKSPLSGIFKDLEHNHC 738
>gi|50549393|ref|XP_502167.1| YALI0C23144p [Yarrowia lipolytica]
gi|49648034|emb|CAG82487.1| YALI0C23144p [Yarrowia lipolytica CLIB122]
Length = 1526
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 244/413 (59%), Gaps = 65/413 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL+ VI DT P EYDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPLISQQVI--------------DTQIP-----EYDNLYLDMNSILH 41
Query: 61 PCFHPE-DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H + D T +++F+ +F+YI+ LF +RP+KL +MAIDGVAPRAKMNQQRSRRF
Sbjct: 42 VCTHKDADVTFQLTEEQMFRAIFEYIEHLFSKIRPKKLFFMAIDGVAPRAKMNQQRSRRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R + DA E+ + + EG L K D FDSN ITPGTEFM L+ L Y++H
Sbjct: 102 RTALDA-------EKAKAKALEEGTIL--KEDQ--FDSNAITPGTEFMEKLTTQLNYFVH 150
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+++ D W+ I ++LS VPGEGEHKI +R+ + P YDPNTRHC+YGLDADLIML
Sbjct: 151 KKVSEDADWQNIDIVLSGHEVPGEGEHKINECIRINKAQPDYDPNTRHCVYGLDADLIML 210
Query: 240 ALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L +H+ HFS+LR EVVF P R+AG +
Sbjct: 211 GLGSHDPHFSLLREEVVFGP------------------------RRAG-------PKALE 239
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
++ + LHI LREYL+ EF+ F D E I+DD+I + FFVGNDFLP++P + I
Sbjct: 240 EQNFYLLHISLLREYLELEFQDLADEISFPYDFERILDDYILLFFFVGNDFLPNLPQIHI 299
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
E + L + +YKK + GY+ D +L+R++ F+ + +E IF+++A
Sbjct: 300 NEDSHALFVELYKKVMKISDGYINDRGNINLQRLDLFLAEMEKFEIGIFEEQA 352
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Query: 546 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
WK+ YY++KF + T +E + K + Y EGL W++HYYY+GV SW W+Y YHYAP
Sbjct: 504 WKDDYYKKKFGWSTTTDEGKAELKALTENYVEGLQWILHYYYDGVPSWSWYYGYHYAPRV 563
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD++ Q N+ F+ G PFKPF QL+GV P S LP+ Y LM D NSPI DFYP DF
Sbjct: 564 SDVRKGLQANLKFKAGQPFKPFQQLMGVLPERSKKLLPQAYWPLMADSNSPIYDFYPNDF 623
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
E+D NGK+ W+ + K+PF+DE+RLL + E LT E +RN+ ++LF
Sbjct: 624 ELDKNGKKADWEAVVKIPFVDESRLLTAMATKETGLTAGENKRNAFGNNLLF 675
>gi|339896661|ref|XP_001463108.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|321398929|emb|CAM65457.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1499
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/456 (41%), Positives = 257/456 (56%), Gaps = 66/456 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW AE++P ++ + P V DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPV--------------------DNLYLDINGIIH 40
Query: 61 PCFHPED----RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C HP D R +PT E+ Q MF Y+++LF ++PRK +A+DGVAPRAKMNQQR
Sbjct: 41 NCTHPNDVDATRRSPTE-KEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQ 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR+RA + A EE L G ++P + D VFDSN ITPGT FM +S QY
Sbjct: 100 RRYRAGYEMM--IAREEALAM-----GEEVPEEKD--VFDSNCITPGTPFMVRVSKEFQY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I ++L+ DP W+ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+YGLDADL
Sbjct: 151 FITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 237 IMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
+MLALATHE HF +LREVV F PG + + + +G K KA K DE
Sbjct: 211 VMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGLVKDKA---YHKADEF 262
Query: 296 VVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
V+ LHI R+YL E + ID E ++DDF+FMCFF+GNDFLP +
Sbjct: 263 VL-------LHINVFRDYLQLEVKGYLAKAKSSVSIDFERVIDDFVFMCFFIGNDFLPTL 315
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
PT+ I +G+I L+ +Y + YLT + R E ++ VG E F+ L
Sbjct: 316 PTIGINDGSIPALLRIYVDNMLSKSKYLTHKGEIDWRNAEVWLNEVGKLE---FET---L 369
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVS 445
+R E + +K +ARR +P + D S++P++
Sbjct: 370 RRRQQEEAEFQKNRARR----DPTHEVDTASVIPIT 401
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
Query: 546 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K+RYY EK A + E + + Y EGL WVMHYYY+GV SW+WF+P++YAP A
Sbjct: 406 FKQRYYGEKHGFAGGWDANSEDMQRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMA 465
Query: 605 SDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
SD+ +L +SFELG PF+P QLL V P S ++P+ Y L+ P+SP++ + P
Sbjct: 466 SDMVNLPAIAARVSFELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPE 525
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 526 HIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|398010273|ref|XP_003858334.1| 5'-3' exonuclease, putative [Leishmania donovani]
gi|322496541|emb|CBZ31610.1| 5'-3' exonuclease, putative [Leishmania donovani]
Length = 1499
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/456 (41%), Positives = 257/456 (56%), Gaps = 66/456 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW AE++P ++ + P V DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPV--------------------DNLYLDINGIIH 40
Query: 61 PCFHPED----RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C HP D R +PT E+ Q MF Y+++LF ++PRK +A+DGVAPRAKMNQQR
Sbjct: 41 NCTHPNDVDATRRSPTE-KEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQ 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR+RA + A EE L G ++P + D VFDSN ITPGT FM +S QY
Sbjct: 100 RRYRAGYEMM--IAREEALAM-----GEEVPEEKD--VFDSNCITPGTPFMVRVSKEFQY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I ++L+ DP W+ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+YGLDADL
Sbjct: 151 FITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 237 IMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
+MLALATHE HF +LREVV F PG + + + +G K KA K DE
Sbjct: 211 VMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGLVKDKA---YHKADEF 262
Query: 296 VVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
V+ LHI R+YL E + ID E ++DDF+FMCFF+GNDFLP +
Sbjct: 263 VL-------LHINVFRDYLQLEVKGYLAKAKSSVSIDFERVIDDFVFMCFFIGNDFLPTL 315
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
PT+ I +G+I L+ +Y + YLT + R E ++ VG E F+ L
Sbjct: 316 PTIGINDGSIPALLHIYVDNMLSKSKYLTHKGEIDWRNAEVWLNEVGKLE---FET---L 369
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVS 445
+R E + +K +ARR +P + D S++P++
Sbjct: 370 RRRQQEEAEFQKNRARR----DPTHEVDTASVIPIT 401
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
Query: 546 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K+RYY EK A + E + + Y EGL WVMHYYY+GV SW+WF+P++YAP A
Sbjct: 406 FKQRYYGEKHGFAGGWDANSEDMQRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMA 465
Query: 605 SDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
SD+ +L +SFELG PF+P QLL V P S ++P+ Y L+ P+SP++ + P
Sbjct: 466 SDMVNLPAIAARVSFELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPE 525
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 526 HIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|123469987|ref|XP_001318202.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900955|gb|EAY05979.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 797
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 191/455 (41%), Positives = 267/455 (58%), Gaps = 37/455 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGL---EYDNLYLDMNG 57
MGVPAF+R L+ KYPL++++ IE P +G +P + S PNPN + E+D LYLDMNG
Sbjct: 1 MGVPAFFRTLSRKYPLIISNCIE--PHETNGHYLP-NASLPNPNTIGDREFDCLYLDMNG 57
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
+IHPCFHPE P P + EV Q + +YI+RLF++VRPR++L+MAIDG APRAKMNQQR R
Sbjct: 58 LIHPCFHPEGLPPPKSEAEVLQNIENYIERLFMIVRPRQILFMAIDGPAPRAKMNQQRKR 117
Query: 118 RFRASKDAA-DSAAEEERLRQEFERE-GRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
RF A+K AA D + + ++ E E +L + DSNVITPGT F LS L
Sbjct: 118 RFFAAKQAAHDRWIKYWKAQKSGETELAAELYNPDYLKNHDSNVITPGTLFFERLSKHLH 177
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
+I + DP W KI VILSDA+VPGEGEHKIM +VR QR P YD N H +YGLDAD
Sbjct: 178 GFIQRKQETDPAWGKICVILSDASVPGEGEHKIMDFVRAQRLEPQYDSNRHHVIYGLDAD 237
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRK-------AGEF 288
+I L LA+HE +++ILRE + + L Q E K A E
Sbjct: 238 IIFLGLASHEPYWTILRERI-----NEAKDLPRQNSQQKKATEEDEKMALHHQIFDAPEE 292
Query: 289 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPN--PPFEIDLECIVDDFIFMCFFVGND 346
EK D ++ K + F+ +W LR+YL+ + + N P DLE +DDFIF+C+ GND
Sbjct: 293 KEKVD--LIGPKHFDFVSLWILRQYLERDLKPRNLPPNLPWDLERAIDDFIFICYGCGND 350
Query: 347 FLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV------GSY 400
F+P +P I EG ++ ++ +YK YLT + R + F++ + G Y
Sbjct: 351 FIPTLPGFSIAEGTVSDIICLYKNNLPRYNAYLTYNGQVDFPRFKDFMKLICDERRTGEY 410
Query: 401 EDRIFQKRARLH----QRHAERIKREKAQARRGDD 431
+F++ + LH ++ +E I+++ + + D
Sbjct: 411 ---VFERNSLLHILCPEQRSEEIEKQVNKISQAPD 442
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 12/179 (6%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
K YY++KF+A+T EE + +V +T G+ W ++YY G +W W YPYH AP +SD
Sbjct: 485 KRVYYKQKFHAETKEEIAK----IVTEFTRGMIWTLNYYLHGTHNWDWSYPYHSAPCSSD 540
Query: 607 --LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
L D++ F+ G PF P QL+ V P S+HALPE + LMT+ SPI DFYPT F
Sbjct: 541 WDLVDVNPATYQFDRGCPFLPLWQLMAVLPPQSAHALPEKMQFLMTNEKSPIKDFYPTTF 600
Query: 665 EVDMNGKRYSWQGIAKLPFIDEA------RLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+D+ G + +++G +PFI EA R+ D +K + LT EE +RN +F+
Sbjct: 601 SIDLEGAKQAYKGHVLVPFIGEANTDWDKRISDVMKGTDLRLTYEEEQRNQFSPTYIFL 659
>gi|313230942|emb|CBY18940.1| unnamed protein product [Oikopleura dioica]
Length = 1623
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 188/460 (40%), Positives = 258/460 (56%), Gaps = 77/460 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYR+++E+YP ++ VI+E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRYMSERYP-CLSQVIKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC HP D T +++F+ +F YI+ LF ++RPRK+ +MA+DGVAPRAKMNQQRSRR
Sbjct: 42 PCSHPNDDDPHFRITEEQIFKDIFHYIECLFRIIRPRKVFFMAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E ER +E +G LP + FDSNVITPGT FM L L+Y+I
Sbjct: 102 FRSAKEAE----ENERKAKE---KGESLPTEGK---FDSNVITPGTGFMVRLDKQLRYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++ +D W I V LS PGEGEHKIM Y+R QR L +DP TRHCLYGLDADLIM
Sbjct: 152 QNKITHDDAWRGITVFLSGHETPGEGEHKIMEYIRYQRTLSDHDPRTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L LATHE +FS+LRE + +DK + P R AG + D
Sbjct: 212 LGLATHEPNFSLLREEIQFTKAKDKMIIVFIP-----------YRSAGRQNRPEDIT--- 257
Query: 299 KKPYQFLHIWTLREYLDYEFR-----------IPNPPFEIDLECIVDDFIFMCFFVGNDF 347
+ LH+ +R+Y+ +EF+ + E DLE ++DD++ M F VGNDF
Sbjct: 258 ---FHLLHLSVMRDYIHHEFKDLRTSLASRKSSGDIEIEYDLERLIDDWVLMGFLVGNDF 314
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ- 406
+PH+P ++I++ + +L Y K LG YLT+ K L +E F + E F+
Sbjct: 315 VPHLPNMQIKQDHLPVLYKSYSKVVPKLGKYLTERGKIDLDVLEEFFFVLSENEREQFEN 374
Query: 407 ----------KRARLHQRHAERIKREKAQARRGDDVEPLA 436
KR+ + + H ++ A D++E LA
Sbjct: 375 SQADDKYLAGKRSMMKESHGKK-------AAAHDELEALA 407
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
++ YY KFN + +E + T K+ Y L W+MHYYY GV SW W++P+HY+PF S
Sbjct: 451 YRNGYYHSKFNKRLTKEFQYTMKN---EYVRALQWIMHYYYNGVQSWGWYFPFHYSPFLS 507
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYPTDF 664
D+ L + N+ ++ G PF PF QLL V P++S ALPE + LM P S I DFYPT+F
Sbjct: 508 DMVKLKECNLKYDYGKPFLPFEQLLAVLPASSGKVALPEVFHSLMDSPTSSIIDFYPTEF 567
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
E D+NGK W+ + +PFIDE RL + ++ L+ + RN
Sbjct: 568 ETDLNGKMQDWEAVVLIPFIDENRLYEAMQPALAKLSPFDKCRN 611
>gi|449482933|ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 685
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/299 (51%), Positives = 202/299 (67%), Gaps = 13/299 (4%)
Query: 491 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 550
IG + +A + QEN EE + + + + + P DK+KLGEPG+KERY
Sbjct: 124 AIGGYLTDA-----GEAQENNEEMRGRAR-----RENGPPPPPPTVDKIKLGEPGYKERY 173
Query: 551 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
Y EKFNA P E ++DVVL+Y EGLCWV YYY GVCSWQW+YPYHY+PFASDLK+L
Sbjct: 174 YAEKFNA-NPANIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNL 232
Query: 611 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 670
I+F +G PFKPF+QL+G P+ASS ALPE YR LMTDP+SPI +FYP+DFE+DMNG
Sbjct: 233 ADLEITFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDPSSPILEFYPSDFEIDMNG 292
Query: 671 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
KR+ WQG+AKLPFIDE +LL + +++E +LT+EE RNS+M DML+ +HPLSA I++
Sbjct: 293 KRFQWQGVAKLPFIDERKLLAQTRRLEWSLTDEEKNRNSVMLDMLYTHCTHPLSAQIFSY 352
Query: 731 DEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ QL R ++ S GMNGY+ C + V +SP+ S+ DI NQVL
Sbjct: 353 YQVASQLPPHARTCWV--IDTNASGGMNGYLWLCERNVIRNVVQSPINSLPDIQCNQVL 409
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/137 (64%), Positives = 107/137 (78%), Gaps = 4/137 (2%)
Query: 249 SILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG-DEVVVPKKPYQFLHI 307
+++ +V+ PGQQ+KC+ CG+ GHLAA C GK+ G D G DE + KK YQFL+I
Sbjct: 1 TLVVQVIMLPGQQEKCYNCGKVGHLAAECRGKSD---GPEDWNGADETPIHKKKYQFLNI 57
Query: 308 WTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367
W LREYL YE IPNPPFEI+ E IVDDF+F+CFFVGNDFLPHMPTLEIREGAINLLM +
Sbjct: 58 WVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHI 117
Query: 368 YKKEFRALGGYLTDGSK 384
Y+KEF A+GGYLTD +
Sbjct: 118 YRKEFPAIGGYLTDAGE 134
>gi|67902396|ref|XP_681454.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
gi|40740017|gb|EAA59207.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
Length = 1699
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 188/452 (41%), Positives = 262/452 (57%), Gaps = 75/452 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK D FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EQAKEKAIAQGIEM------PKEDP--FDSNCITPGTEFMAKLTEQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 ISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q ++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
+ LH+ +REYL EF+ I + P+E E ++DDFI M FFVGNDFLP++
Sbjct: 246 ----FYLLHLCMVREYLQLEFQELEEEGIIDFPYE--FERVIDDFILMAFFVGNDFLPNL 299
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P L I EGA++L+ VYK+ +GGY+ + +L+R+ + A+ E R F+
Sbjct: 300 PNLHINEGALSLMFKVYKEVLPKMGGYINEQGTINLQRLGVLLDALSHVEYRFFEA---- 355
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVP 443
+ R K A G DV+ + ++ P
Sbjct: 356 -EYSDATWMRAKQSADNGADVDAKPKTFTVTP 386
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK++YY EKF + EE RK + Y +GL WV+ YYY G+ SW WF+ HYAP S
Sbjct: 508 WKDKYYMEKFGWGL-DNHEEMRK-LTENYVQGLQWVLFYYYRGIASWPWFFNSHYAPMIS 565
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+K +++F LG PF+P++QL+GV P S +P+ Y LM+ P+SPI DFYP DFE
Sbjct: 566 DVKKGLNADMNFRLGRPFRPYDQLMGVLPDRSKKIVPKAYHDLMSSPDSPIIDFYPRDFE 625
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFIDE RLLD + EH LT EE RN + F
Sbjct: 626 LDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEEKARNGFGVSLKFT 677
>gi|157864164|ref|XP_001680795.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68124087|emb|CAJ02069.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1490
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/456 (40%), Positives = 257/456 (56%), Gaps = 66/456 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW AE++P ++ + P V DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPV--------------------DNLYLDINGIIH 40
Query: 61 PCFHPED----RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C HP D R +PT E+ Q MF Y+++LF ++PRK +A+DGVAPRAKMNQQR
Sbjct: 41 NCTHPNDVDATRRSPTE-KEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQ 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR+RA + A EE L G ++P + D VFDSN ITPGT FM +S QY
Sbjct: 100 RRYRAGYEMM--IAREEALAM-----GEEVPEEKD--VFDSNCITPGTPFMVRVSKEFQY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I ++L+ DP W+ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+YGLDADL
Sbjct: 151 FITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 237 IMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
+MLALATHE HF +LREVV F PG + + + +G K KA K DE
Sbjct: 211 VMLALATHEPHFVLLREVVAFGPGSRKE-----RERQEEDEAKGLVKDKA---YHKADEF 262
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRI----PNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
V+ LHI R+YL E + +D E ++DDF+FMCFF+GNDFLP +
Sbjct: 263 VL-------LHINVFRDYLQLEVKSYLAKAKSSVSVDFERVIDDFVFMCFFIGNDFLPTL 315
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
PT+ I +G+I L+ +Y + YLT + R E ++ VG E F+ L
Sbjct: 316 PTIGINDGSIPALLRIYVDNMLSKNKYLTHKGEIDWRSAEVWLNEVGKLE---FET---L 369
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPD--SLVPVS 445
+R E + +K +ARR +P + D S++P++
Sbjct: 370 RRRQQEEAEFQKNRARR----DPTHEVDTTSVIPIT 401
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 9/169 (5%)
Query: 546 WKERYYEEK--FNAKTPEEREETRKDVVLR--YTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
+K+RYY EK F E+ R+ LR Y EGL WVMHYYY+GV SW+WF+P++YA
Sbjct: 406 FKQRYYGEKHGFAGGWDASSEDMRR---LREHYVEGLMWVMHYYYQGVPSWKWFFPHYYA 462
Query: 602 PFASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
P ASD+ +L N+SFELG PF+P QLL V P S ++P+ Y L+ P+SP++ +
Sbjct: 463 PMASDMVNLPAIAANVSFELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKY 522
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
P +D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 523 LPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|347831559|emb|CCD47256.1| similar to 5'-3' exoribonuclease 1 [Botryotinia fuckeliana]
Length = 1389
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/411 (42%), Positives = 245/411 (59%), Gaps = 68/411 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPSISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + A T +++F +F+YI+ L+ ++P++L YMA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFYMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + D E R++ +EG+++P K D+ FDSN ITPGTEFM L++ L+Y+I
Sbjct: 102 FRTALDV-------ENAREKAIKEGKEMP-KEDA--FDSNSITPGTEFMQKLTLQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+ +++LS VPGEGEHKIM Y+RL++ P YDPN RHCLYGLDADLIM
Sbjct: 152 AKKISEDVDWQGTEIVLSGHEVPGEGEHKIMEYIRLKKAQPDYDPNRRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q K K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQSKA-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
+ +H+ +REYL+ EF+ + PF DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ---FYLMHLCIVREYLELEFQELKEDGVLGFPF--DLERVIDDFILMAFFVGNDFLPNLP 300
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 403
L I EGA+ L+ VYK GGY+ +G ++ R+ ++ + E R
Sbjct: 301 NLHINEGALALMFKVYKTILPKGGGYINEGGVINMSRLAILLEELSHVEYR 351
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK++YYE KF E E T+ + Y +GL WV++YYY GV SW W+Y YHY+P S
Sbjct: 506 WKDKYYEGKFEWDRKNEIELTK--LCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMIS 563
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ + +++F+LG PF PF QL+GV P S +P Y LMT+P SPI DFYP DFE
Sbjct: 564 DVIKGLKADVNFKLGQPFHPFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFE 623
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFIDE RLLD + + L++ E RN + F
Sbjct: 624 LDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAEKFRNEFGVSLKFT 675
>gi|259480959|tpe|CBF74062.1| TPA: exonuclease II (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1398
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 188/452 (41%), Positives = 262/452 (57%), Gaps = 75/452 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAEN--------RIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ + Q E PK D FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EQAKEKAIAQGIEM------PKEDP--FDSNCITPGTEFMAKLTEQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ D W+ ++++LS VPGEGEHKIM Y+R + PGYDPN RHCLYGLDADLI
Sbjct: 151 ISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q ++K E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------VQKKPKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFR------IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
+ LH+ +REYL EF+ I + P+E E ++DDFI M FFVGNDFLP++
Sbjct: 246 ----FYLLHLCMVREYLQLEFQELEEEGIIDFPYE--FERVIDDFILMAFFVGNDFLPNL 299
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
P L I EGA++L+ VYK+ +GGY+ + +L+R+ + A+ E R F+
Sbjct: 300 PNLHINEGALSLMFKVYKEVLPKMGGYINEQGTINLQRLGVLLDALSHVEYRFFEA---- 355
Query: 412 HQRHAERIKREKAQARRGDDVEPLAQPDSLVP 443
+ R K A G DV+ + ++ P
Sbjct: 356 -EYSDATWMRAKQSADNGADVDAKPKTFTVTP 386
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK++YY EKF + EE RK + Y +GL WV+ YYY G+ SW WF+ HYAP S
Sbjct: 508 WKDKYYMEKFGWGL-DNHEEMRK-LTENYVQGLQWVLFYYYRGIASWPWFFNSHYAPMIS 565
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+K +++F LG PF+P++QL+GV P S +P+ Y LM+ P+SPI DFYP DFE
Sbjct: 566 DVKKGLNADMNFRLGRPFRPYDQLMGVLPDRSKKIVPKAYHDLMSSPDSPIIDFYPRDFE 625
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFIDE RLLD + EH LT EE RN + F
Sbjct: 626 LDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEEKARNGFGVSLKFT 677
>gi|255715011|ref|XP_002553787.1| KLTH0E07062p [Lachancea thermotolerans]
gi|238935169|emb|CAR23350.1| KLTH0E07062p [Lachancea thermotolerans CBS 6340]
Length = 1496
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 241/411 (58%), Gaps = 64/411 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P++ +IDG +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMISQ--------LIDGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D +EVF +F YID LF + P++ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 TCTHANDDDVKKRMSEEEVFSKIFAYIDHLFHTIGPKQTFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ ++ R+G ++P + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAMDA-------EKALEKAIRDGEEIP---KGEPFDSNSITPGTEFMAKLTENLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ND W +ILS VPGEGEHKIM Y+R R P Y+ NTRHC+YGLDADLIM
Sbjct: 152 HDKISNDSAWSSTSIILSGHEVPGEGEHKIMEYIRRMRAQPDYNANTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+TH+ HF++LRE V T G++ K AA E
Sbjct: 212 LGLSTHDPHFALLREEV-TFGRRQK----------AAPLE-------------------- 240
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LHI LREYL+ EFR + FE D E I+DDFI + F +GNDFLP++P L +
Sbjct: 241 YQNFYLLHISMLREYLELEFREIADDLQFEYDFERILDDFILVMFVIGNDFLPNLPDLHL 300
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
+GA +L+ +K+ + GY+ + +L R + ++Q + +E F++
Sbjct: 301 NKGAFPVLLQTFKEALKHTDGYINEQGTINLSRFQVWLQYLSEFEMMNFER 351
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 119/200 (59%), Gaps = 12/200 (6%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
W+++YY EK +E + +++ Y EGL WV+ YYY G SW W+Y YHYAP S
Sbjct: 510 WRDQYYREKLGFSYYDE--DKLRELTETYVEGLQWVLFYYYRGCQSWSWYYKYHYAPRIS 567
Query: 606 DL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
D+ K L+Q +I F LG PF+PF QL+ V P S + +P YR LM DP SPI+DFYP++
Sbjct: 568 DVYKGLNQ-SIKFNLGKPFRPFQQLMAVLPERSKNLIPTVYRPLMYDPKSPIADFYPSEV 626
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV------- 717
E+D NGK W+ + KL F+DE RL++ + + LT EE RRNS D+ FV
Sbjct: 627 ELDKNGKTADWEAVVKLSFVDENRLIEAMAPYDEKLTPEEKRRNSFGTDLAFVFNPQVDD 686
Query: 718 LLSHPLSASIYTLD-EHCKQ 736
+ PLS ++ HC +
Sbjct: 687 VYKSPLSGIFSDIEHNHCTE 706
>gi|407420481|gb|EKF38586.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 1446
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 176/434 (40%), Positives = 246/434 (56%), Gaps = 61/434 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW+AE+YP V+ + P V DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERYPTVITPFRDSPPPV--------------------DNLYLDMNGIIH 40
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D A T + + MF Y+++LF +++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R+R+ D + RQE +G ++P + D VFDSN ITPGT FM +S LQY+
Sbjct: 101 RYRSGYDLMVA-------RQEAIAQGEEVPDEKD--VFDSNCITPGTNFMVRVSEQLQYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ DP W+ +V+ S + PGEGEHKI+ ++R ++ P Y PN HC+YGLDADL+
Sbjct: 152 ITMKIAMDPAWQNCQVVYSGHDSPGEGEHKIVDFIRRRKMQPEYSPNETHCMYGLDADLV 211
Query: 238 MLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
ML+LATHE HF +LREVV F PGQ E + R+ E DE +
Sbjct: 212 MLSLATHEPHFLLLREVVTFGPGQ-----------------ESRRAREQREEDEANG--I 252
Query: 297 VPKKPYQ------FLHIWTLREYLDYEFR---IPNPPFEIDLECIVDDFIFMCFFVGNDF 347
V K Y+ H+ LR+YLD + R P DLE ++DDF+ MCFFVGNDF
Sbjct: 253 VADKSYRKADEFVLFHVNVLRDYLDLDVRGKLGAKLPANYDLERVLDDFVLMCFFVGNDF 312
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
LP +PTL I +G++ ++ +Y K G YLT+ + + R VE ++Q + E +
Sbjct: 313 LPTIPTLGIHDGSLLQMIDLYCKCILVEGVYLTNQGQINWRAVELWLQGISELELTTIKA 372
Query: 408 RARLHQRHAERIKR 421
R + + + ++ R
Sbjct: 373 RQQQEEEYQRKMTR 386
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 119/228 (52%), Gaps = 14/228 (6%)
Query: 495 AIVEAENSFETDPQENKEEFKAKLKELLRD---KSDAFNSDNPEEDKVKLGEPGWKERYY 551
I E E + Q+ +EE++ K+ RD ++ A S + E + +KER+Y
Sbjct: 361 GISELELTTIKARQQQEEEYQRKMTR--RDPTHEAAAITSAHIESIR------DYKERFY 412
Query: 552 EEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
EK K + + + D+ L Y EGL WVM YYY+G SW+WF+P+HYAP ASDL +L
Sbjct: 413 REKHGFDKGWDPQGKEMADLRLHYVEGLMWVMGYYYQGPPSWKWFFPHHYAPMASDLVNL 472
Query: 611 DQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 668
+ F+ G PF P QLL V P S ++P Y LM SP+ F+P ++D
Sbjct: 473 PAIAARVEFDPGKPFLPHQQLLAVLPPMSYRSMPRAYWPLMLSDKSPLKRFFPEILQIDR 532
Query: 669 NGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
R W+GI +PFI+E LL + +++ + E+ N + LF
Sbjct: 533 ENARAPWEGIVLIPFIEERVLLAAYQSVQNKVEPEDEVHNRLGPATLF 580
>gi|401415084|ref|XP_003872038.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488260|emb|CBZ23505.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1527
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 181/437 (41%), Positives = 247/437 (56%), Gaps = 60/437 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW AE++P ++ + P V DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIITPFKDSPPPV--------------------DNLYLDINGIIH 40
Query: 61 PCFHPED----RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C HP D R +PT E+ Q MF Y+++LF ++PRK +A+DGVAPRAKMNQQR
Sbjct: 41 NCTHPNDVDATRRSPTE-KEMIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQ 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR+RA + + RQE G ++P + D VFDSN ITPGT FM +S QY
Sbjct: 100 RRYRAGYEMMIA-------RQEALAMGEEVPEEKD--VFDSNCITPGTPFMVRVSKEFQY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I ++L+ DP W+ ++I S + PGEGEHKI+ ++R ++ P YDPN HC+YGLDADL
Sbjct: 151 FITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 237 IMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
+MLALATHE HF +LREVV F PG + + + +G K KA K DE
Sbjct: 211 VMLALATHEPHFVLLREVVTFGPGSRKE-----RERQEEDEAKGLVKDKA---YHKADEF 262
Query: 296 VVPKKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
V+ LHI R+YL E + +D E ++DDF+FMCFF+GNDFLP +
Sbjct: 263 VL-------LHINVFRDYLQLEVKGYLAKAKSSASMDFERVIDDFVFMCFFIGNDFLPTL 315
Query: 352 PTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARL 411
PT+ I +G+I L+ +Y + YLT + R E ++ VG E F+ L
Sbjct: 316 PTIGINDGSIPALLRIYVDNMLSKNKYLTHKGEIDWRNAEVWLNEVGKLE---FET---L 369
Query: 412 HQRHAERIKREKAQARR 428
+R E + +K +ARR
Sbjct: 370 RRRQQEEAEFQKNRARR 386
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 100/166 (60%), Gaps = 3/166 (1%)
Query: 546 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K+RYY EK A + + + Y EGL WVMHYYY+GV SW+WF+P++YAP A
Sbjct: 406 FKQRYYGEKHGFAGGWDANSADMRRLREHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMA 465
Query: 605 SDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
SD+ +L +SFELG PF+P QLL V P S ++P+ Y L+ P+SP++ + P
Sbjct: 466 SDMVNLPAIAARVSFELGKPFQPHQQLLAVLPPMSYLSMPKAYWPLLRSPSSPLAKYLPE 525
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+D G R W+GI +PFIDE LL + ++ ++ E+A N
Sbjct: 526 HIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDAANN 571
>gi|320590324|gb|EFX02767.1| exonuclease [Grosmannia clavigera kw1407]
Length = 1463
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/412 (42%), Positives = 241/412 (58%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP ++ +I E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYP-AISQLIAEN-------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + A T +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQRSRR
Sbjct: 42 NCTHSDSDDAFTRLGEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E R++ EG +LP FDSN ITPGTEFMA LS LQY++
Sbjct: 102 FRTALDA-------EVARKKAIAEGAQLPTDDP---FDSNCITPGTEFMAKLSKQLQYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W++ V+LS +VPGEGEHKIM Y+R + Y N RHCLYGLDADLIM
Sbjct: 152 NKKVSEDKEWQQCTVVLSGHDVPGEGEHKIMEYIRNAKAQKDYSANMRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q K K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQTKT-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ LH+ +REYL+ EF+ PF ++E I+DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLLHLCIVREYLELEFQELKTDKTMPFAFNMERIIDDFILMAFFVGNDFLPNLPRL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
I EGA+ + ++YK+ GY+ +G +L+R+ ++ E R F+
Sbjct: 303 HINEGALATMFSIYKRVLPKCEGYINEGGAVNLKRLGLLLEEFSKEEFRFFE 354
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 113/183 (61%), Gaps = 3/183 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK+ YY EKF + EE RK + Y +GL WV++YYY G+ SW WFY YHY+P S
Sbjct: 555 WKDGYYREKFAWTDGQLSEEVRK-LCENYVQGLQWVLYYYYRGIASWPWFYHYHYSPLIS 613
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ +++F+LG PFKPF QL+GV P S +P Y LMT+ +SPI DFYP DFE
Sbjct: 614 DVIKGLGADLNFKLGQPFKPFEQLMGVLPDRSKKIVPTVYWGLMTEEDSPIVDFYPRDFE 673
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA 725
+DMNGK+ W+ + K+PFIDE RLL +K L+ +E RN A + F HP +
Sbjct: 674 LDMNGKKMEWEAVVKIPFIDERRLLTAMKPKNALLSADEQSRNEFGAPIEFTF--HPGTD 731
Query: 726 SIY 728
+Y
Sbjct: 732 FMY 734
>gi|242070073|ref|XP_002450313.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
gi|241936156|gb|EES09301.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
Length = 555
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 279/581 (48%), Gaps = 138/581 (23%)
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
HCLYGLDADLIMLALA+HE+HFSILRE V Q + C + E +++ G
Sbjct: 2 HCLYGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKE---LFKTEDSSRKCRG 58
Query: 287 EFDEKGDEVVV----PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 342
F + PKKPYQFL+IW LREYL+ + +IPNP + D+E ++DDFIF+CF
Sbjct: 59 WFPRMTETTASRDRSPKKPYQFLNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFL 118
Query: 343 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 402
GNDF+PH+P++EI EGAI+LL+ VYK+ F +GGY+ S E
Sbjct: 119 TGNDFIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIV------------------STEK 160
Query: 403 RIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQ 462
R+ QR+ R E+ + R D++E PD GP +
Sbjct: 161 RL--------QRNLVRRAAEEWKERNYDNME--ENPD---------------GPDLTVKS 195
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELL 522
S G N + T+ N E + LK+ L
Sbjct: 196 SSTNGGICTNSQVTA--------------------------------NTLELRRNLKDTL 223
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL---------- 572
R+K D S + D ++LG GWK R++ EKF + E + + D+V+
Sbjct: 224 RNKQDLVKSGACKHDAIRLGFAGWKSRFFREKFGVEKSNEVGKLKNDMVMIFSCLCANKI 283
Query: 573 ------RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
+Y EGLCWV+ YY+ V SW W+YP++YAPF SD + L
Sbjct: 284 LIPVVQKYLEGLCWVLRYYFADVPSWSWYYPFYYAPFTSDFEGL---------------- 327
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
+ S ALP+ YR+LM + S I FYP+D ++D +GKR+ WQGIA LPFIDE
Sbjct: 328 ---------SHSCALPKCYRELMENEESLIKKFYPSDLQIDTHGKRFLWQGIAMLPFIDE 378
Query: 687 ARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPL---SASIYTLDEHCKQLKIKERV 743
L K +E L E RN++ D +F+ S+ SA + T D K L
Sbjct: 379 KLLTSATKTVEDKLAVHEINRNTVRQDKIFLRNSNTTPNGSAFVETSDCSSKML------ 432
Query: 744 EVKERLNPELSDGMNGYISPCAGDP-HPPVFRSPVASMEDI 783
L+P S+ + G +SP + FRSP+ ++DI
Sbjct: 433 ----LLDPSTSE-LGGRLSPVDDNSISCGFFRSPIRDLQDI 468
>gi|83317292|ref|XP_731098.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491026|gb|EAA22663.1| Drosophila melanogaster CG10354 gene product-related [Plasmodium
yoelii yoelii]
Length = 1286
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 265/493 (53%), Gaps = 66/493 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIE--EEPVVIDGVKIP--------------VDTS----- 39
MGVP FY+WL +YP + V E + V I +I V+ +
Sbjct: 1 MGVPTFYKWLVTRYPKIAKAVYETRDNDVYIRRARINENGEFYKVCDLGAYVNNTDENHC 60
Query: 40 KPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLY 99
N NG +DN+YLDMNGIIH C H + T +E+F +F YI+RLF ++ P+KLLY
Sbjct: 61 SDNVNGY-FDNMYLDMNGIIHLCSHGDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKLLY 119
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNV 159
MAIDGVAP+AKMNQQRSRRF++ + LR +F E R +P + +DSN+
Sbjct: 120 MAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRNKFLSENRNVP--DEFHHWDSNI 177
Query: 160 ITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 219
ITPGT+FM LS+AL+Y+I ++ ND W+KI VI SDANV GEGEHKI ++++ QR
Sbjct: 178 ITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKSQRAQK 237
Query: 220 GYDPNTRHCLYGLDADLIMLALATHEVHFSILREVV-FTPGQQDK--------------- 263
GYDPNTRH ++G+DADLIML+LA+HE +F ILRE++ P +++K
Sbjct: 238 GYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDPKEENKPQVKDKYVGVFKGKG 297
Query: 264 ----C--FLCGQPGHLAANCEGKAKRK-AGEFDEKGDEVVVPKKP----------YQFLH 306
C FL K K+K ++D++ + Q L
Sbjct: 298 DLQYCTKFLRNNNSTTIDGNNNKGKKKYCNKYDDRNYANINISSTCSINYENWNELQILD 357
Query: 307 IWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 366
+ LREYL +F + +LE +DDFIF+CF GNDFLPH+P++ I G+I+ L+
Sbjct: 358 LSILREYLYKDFFFDT---KYNLERCIDDFIFICFLCGNDFLPHLPSISIASGSIDQLLL 414
Query: 367 VYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQA 426
+Y+K LG YL + + + FI + E F + + KREK +
Sbjct: 415 LYQKVLPVLGDYLINEGSMNFQSFIKFISFIAEVERETFVSQYDFKK------KREKREL 468
Query: 427 RRGDDVEPLAQPD 439
++ P Q D
Sbjct: 469 QKDAFKRPKCQDD 481
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 146/235 (62%), Gaps = 10/235 (4%)
Query: 513 EFKAKLKELLRDKSDAFNSDNPEEDKVKLG---EPG-WKERYYEEKFNAKTPEEREETRK 568
EF LKE ++ ++ +NP+ED V+LG +P + RYY+ KF+ + +E +
Sbjct: 667 EFNLLLKEAVKKANEC---ENPKED-VELGADDDPNDLRTRYYKSKFHLDESDNVDEFVQ 722
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL + NISFE P PF Q
Sbjct: 723 EVVYKYIEGLAWVLCYYFQECPMWHWYYPYYYAPLSSDLL-IKDINISFEKDEPLLPFEQ 781
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
LL V PS SSH LP+ YR+LM SPI DFYP F+ + NGK++ +Q I LPF+++ R
Sbjct: 782 LLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKEEENGKKFKYQWIVLLPFVEKER 841
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT-LDEHCKQLKIKER 742
++ + ++ TLT+EE +RN + +++ +H LS I T + + K++K KE+
Sbjct: 842 IIRFARNLDDTLTDEEKKRNRRGLNKIYMSSTHTLSKKITTSMRTYIKEIKDKEK 896
>gi|66819171|ref|XP_643245.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60471408|gb|EAL69368.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1749
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 231/405 (57%), Gaps = 69/405 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP ++ +++ P EYDNLYLDMNGIIH
Sbjct: 1 MGVPRFFRWVSERYPQILQKILDSNPP-------------------EYDNLYLDMNGIIH 41
Query: 61 PCFHP-EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C + + +E+ + + +Y+DRLF +RP KL YMAIDGVAPR+K+NQQR RRF
Sbjct: 42 ACSQEFANSLIEFSEEELIRQVCNYVDRLFHTIRPTKLFYMAIDGVAPRSKINQQRQRRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
S +E+L+Q+ EG+ +P +F+ ITPGT+FM LS ++Q+YI
Sbjct: 102 L-------SVHRDEKLKQKLISEGKPVP----EVIFNRTAITPGTQFMYNLSESIQFYIK 150
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+++ D W +++VI S PGEGEHKI+ Y+R + P +D N HCLYGLDADLI+L
Sbjct: 151 KKISEDLSWREVRVIFSGPENPGEGEHKIIDYIRKNKASPDWDANQSHCLYGLDADLILL 210
Query: 240 ALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L THE +FSILR E+ F P KR+
Sbjct: 211 GLITHEPNFSILREEISFKP----------------------TKRQLD------------ 236
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+Q LHI LREYLD E R + F DLE I+DDFI + F GNDFLPH+P LEI +
Sbjct: 237 ---FQLLHISLLREYLDLELRNDDLEFGYDLERIIDDFILIMIFFGNDFLPHLPFLEISK 293
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 403
G +N + +YK +LGGYLT+G+ L R++HF + + +E +
Sbjct: 294 GGLNSIFELYKSSLPSLGGYLTEGATIDLERLQHFFKFLQKFEKK 338
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 121/216 (56%), Gaps = 14/216 (6%)
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNPEED---KVKLGEPGWKERYYEEKFNA--KTPEE 562
+E K+EF+ E L+ +S++ EED ++ + YY + FN T +E
Sbjct: 374 EEAKKEFERLAMERLKSHFPVSDSEDGEEDPDEQLVNELYNVENSYYRQYFNEFPNTLDE 433
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 622
+ ++ VVL Y EGL WV++YY+ G SW WFYP++YAP A D ++ +I F+ G P
Sbjct: 434 IKAFKEKVVLSYVEGLVWVLNYYHNGCISWVWFYPFYYAPLAIDFNNIPDLHIDFQPGEP 493
Query: 623 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 682
PF QLL V P S +P+ Y+ LM D SPI DFYP +FE+D Y + GIA+L
Sbjct: 494 ITPFQQLLSVLPPQSVDLIPKSYQTLMLDLFSPIIDFYPVEFEIDTKDPHY-FDGIAELG 552
Query: 683 FIDEARLLDEVKKIEHTL--------TEEEARRNSI 710
FID RLLD I+ +L T+EE RNSI
Sbjct: 553 FIDHQRLLDATASIKKSLAQSGQKVFTDEEEARNSI 588
>gi|380020587|ref|XP_003694164.1| PREDICTED: 5'-3' exoribonuclease 1-like [Apis florea]
Length = 1627
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/407 (41%), Positives = 233/407 (57%), Gaps = 66/407 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R++ E+YP + + +IP E+DNLYLD+NGIIH
Sbjct: 1 MGIPKFFRYINERYPCLTEK--------LKDYQIP-----------EFDNLYLDLNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D E +F+ +F YI LF M++P+KL ++AIDGVAPRAK+NQQRSRR
Sbjct: 42 ECSHPDDTDVTFRISEEIIFKNIFRYIQVLFCMIQPQKLFFIAIDGVAPRAKINQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F+A+KDA A+ + +E R FDSN ITPGT FM+ L L+Y+I
Sbjct: 102 FKAAKDAQIQEAKAKAKGINLPKEKR----------FDSNCITPGTLFMSKLDEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K KVILS + VPGEGEHKIM Y+R + P YD NT+HCLYGLDADLIM
Sbjct: 152 TYKISTDKLWQKCKVILSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L THE+HF++LRE + F GK +RK +
Sbjct: 212 LGLCTHEIHFTLLREELTF----------------------GKKQRKV---------CLT 240
Query: 298 PKKP-YQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P++ + H+ LREY+++EF PF DLE I+DD+I M F +GNDF+PH+P L
Sbjct: 241 PEETKFCLFHLSLLREYINHEFSSLKEKLPFSYDLEKIIDDWILMGFLIGNDFIPHLPNL 300
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
I GA+++L VY L GY+ + L R E F++ + ++
Sbjct: 301 HIIHGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMERLSRFD 347
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 86/135 (63%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + W ++YYY G CSW W+YP+HYAP+ SD+KD + FELG PF PF QLL V
Sbjct: 459 YVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVL 518
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
PS S LP ++ L+T+ SPI ++YP++FE D+NGK W+ + +PFI+E LLD +
Sbjct: 519 PSYSKELLPSAFQTLLTEEQSPIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAM 578
Query: 694 KKIEHTLTEEEARRN 708
LT EE RN
Sbjct: 579 APHYSKLTLEEQARN 593
>gi|358340790|dbj|GAA27297.2| 5'-3' exoribonuclease 1 [Clonorchis sinensis]
Length = 1804
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 205/661 (31%), Positives = 316/661 (47%), Gaps = 76/661 (11%)
Query: 88 LFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP 147
L ++RPRK L++A+DGVAPRAKM QQR+RRF+++++A + A+ ++ Q
Sbjct: 9 LVQLIRPRKTLFLAVDGVAPRAKMTQQRARRFQSAQEARKTKADAQKRGQ---------- 58
Query: 148 PKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHK 207
+ ++FD VI+PGTEFM L L+ ++ + N + W+ + +ILS + PGEGEHK
Sbjct: 59 -ATSVELFDPCVISPGTEFMERLHNVLKEFVKEQANQNEAWKHVDIILSGHDCPGEGEHK 117
Query: 208 IMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLC 267
I Y+ +R+ P Y PN R+C+YG+DADLI L L THE++ ILRE V
Sbjct: 118 IREYMSFKRHQPDYCPNERYCIYGMDADLIFLGLTTHELNMCILRENVV----------- 166
Query: 268 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPF 325
K V + P+ ++ LREY+D EF + PF
Sbjct: 167 -----------------------KTKTCVAEQLPFCVTYLSVLREYIDCEFEALKNSLPF 203
Query: 326 EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP 385
DLE IVDD+IFM F +GNDF+PH+P L I ++ +L Y L GYL + +
Sbjct: 204 PYDLERIVDDWIFMAFLLGNDFIPHIPNLHIHAESLLVLWDTYHVVLPQLDGYLVEYGRL 263
Query: 386 SLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVS 445
+L+R +I+ + +E F++R H+ R KR AR + A V+
Sbjct: 264 NLQRFHRYIEELSKFEQSWFEEREADHRWM--RGKRGAQMARELATLGDGAGSTEQHQVN 321
Query: 446 RFHGSRLASGPSPSPYQQSE----CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVE-AE 500
+ P P P + E + L + H + I ++
Sbjct: 322 NTSKEPPSGSPDPKPRKSIENELSSLTALTSLFAADDLFHGEFLDETEELIAEGVISHIP 381
Query: 501 NSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP-EEDKVKLGEPGWKERYYEEKFNAKT 559
++ ET PQ + + + L S +F D D+ +L + YY K +
Sbjct: 382 SAQETKPQNDLIASQLVDADQLLSSSSSFEDDAELLSDEDELVYRMHRRDYYWTKLSIPV 441
Query: 560 PEEREETRK--DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL---------- 607
E E R+ +V Y L W++ YY+ V W ++Y YHYAPFA DL
Sbjct: 442 GSEEELKRRLMPLVTDYVRMLQWILSYYFLRVADWNFYYAYHYAPFACDLMLYTAQFANS 501
Query: 608 --------KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
+DL F+ P PF Q + + P+ ++ +P+ +R LMT +SP++ F
Sbjct: 502 QLGSSSDNEDLSWTKFDFD-SQPVLPFVQQMMIMPADGAYIVPQVFRSLMTSSDSPLAPF 560
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
+P F D+NGK SW+ + +PFIDE LL ++ + LT E +RN + + +
Sbjct: 561 FPETFATDINGKIASWEAVVLIPFIDETILLKAMEPLNKGLTAAEQKRNQHNSHLFYPAC 620
Query: 720 S 720
S
Sbjct: 621 S 621
>gi|169615619|ref|XP_001801225.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
gi|111060348|gb|EAT81468.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
Length = 1439
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/462 (39%), Positives = 261/462 (56%), Gaps = 68/462 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPGISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + A + D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHNDSDGATARKSEDQMFLDIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ R + REG ++P + + FDSN ITPGT FMA L+ L+Y+I
Sbjct: 102 FRTALDA-------EKARDKAIREGVEMPKE---EAFDSNCITPGTAFMAKLTQQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ ++V+LS VPGEGEHK+M Y+R + PGYDPN RHCLYGLDADLIM
Sbjct: 152 NKKVSEDMDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+Q + K+ E + +
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGRQSQT-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLMHLCIVREYLELEFQELAEPGALGFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-KRARLHQ 413
I EGA+ L+ VYK GY+ + ++ R+ + + E R F+ + A
Sbjct: 303 HINEGALALMFNVYKTVLPKGKGYINEEGVINMERLVLLLDELSQIEYRHFESENADAAW 362
Query: 414 RHAERIKRE---KAQARRGDDVEPLAQPDSLVPVSRFHGSRL 452
+R+++E + ARRG + Q + + G L
Sbjct: 363 FKGKRLEKEDVMQKTARRGTVIMSTQQKQLFSKIKSWLGHYL 404
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
WK YY+ KF E EE RK + Y +GL WV++YYY GV SW W+Y YHY+P
Sbjct: 511 AWKNDYYKSKFEWDRSNE-EELRK-LTENYVQGLQWVLYYYYRGVASWPWYYGYHYSPMI 568
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD+K + NI F+LG PFKPF QL+GV P S +P+ Y LMT +SPI DFYP DF
Sbjct: 569 SDVKRGIKANIDFKLGQPFKPFQQLMGVLPDRSKSIVPKAYHPLMTSEDSPIIDFYPRDF 628
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFI+E RLL + E LT +E RNS + F
Sbjct: 629 TLDMNGKKQDWEAVVKIPFIEEDRLLKAMATKEDDLTADEKSRNSFGVSLKFT 681
>gi|407853365|gb|EKG06397.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 1646
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 245/434 (56%), Gaps = 61/434 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW+AE+ P V+ + P V DNLYLDMNGIIH
Sbjct: 206 MGVPKFFRWVAERCPTVITPFRDSPPPV--------------------DNLYLDMNGIIH 245
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D A T + + MF Y+++LF +++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 246 NCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQR 305
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R+R S E RQE +G ++P + D VFDSN ITPGT FM +S QY+
Sbjct: 306 RYR-------SGYELMVARQEAIAQGEEVPDEKD--VFDSNCITPGTNFMVRVSEQFQYF 356
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ DP W+ +V+ S + PGEGEHKI+ ++R ++ PGY PN HC+YGLDADL+
Sbjct: 357 ITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADLV 416
Query: 238 MLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
ML+LATHE HF +LREVV F PGQ E + R+ E DE +
Sbjct: 417 MLSLATHEPHFLLLREVVTFGPGQ-----------------ESRRAREQREEDEANG--I 457
Query: 297 VPKKPYQ------FLHIWTLREYLDYEFR---IPNPPFEIDLECIVDDFIFMCFFVGNDF 347
+ K Y+ H+ LR+YLD + R P DL+ ++DDF+ MCFF+GNDF
Sbjct: 458 IADKSYRKADEFVLFHVNVLRDYLDLDVRDKLGAKMPACYDLDRVLDDFVLMCFFIGNDF 517
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
LP +PTL I +G++ ++ +Y K G YLT+ + + R VE ++Q +G E +
Sbjct: 518 LPTIPTLGIHDGSLLQMLDLYCKCILVEGMYLTNQGQINWRAVELWLQGIGELELTTIKA 577
Query: 408 RARLHQRHAERIKR 421
R + + + ++ R
Sbjct: 578 RQQQEEEYQRKVAR 591
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 112/214 (52%), Gaps = 12/214 (5%)
Query: 508 QENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF---NAKTPEERE 564
Q+ +EE++ K+ A + P E + +KER+Y EK N P+ +E
Sbjct: 579 QQQEEEYQRKVARRDPTHETAAITSAPIESIRE-----YKERFYREKHGFDNGWDPQGKE 633
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF--NISFELGHP 622
D+ L Y EGL WVM YYY+G SW+WF+P+HYAP ASDL +L + F+ P
Sbjct: 634 MA--DLRLHYVEGLTWVMGYYYQGPPSWKWFFPHHYAPMASDLVNLPAIAARVEFDPSKP 691
Query: 623 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 682
F P QLL V P S ++P Y LM SP+ F+P ++D G R W+GI +P
Sbjct: 692 FLPHQQLLAVLPPMSYRSMPRAYWPLMLSDKSPLKRFFPEILKIDREGARAPWEGIVLIP 751
Query: 683 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
FI+E LL + +++ L E+ N + LF
Sbjct: 752 FIEERVLLAAYQSVQNKLGPEDEVHNRLGPATLF 785
>gi|55726904|emb|CAH90211.1| hypothetical protein [Pongo abelii]
Length = 402
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/412 (40%), Positives = 243/412 (58%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HF +LRE V G+ K V P
Sbjct: 212 LGLTSHEAHFPLLREEVRFGGK------------------------------KTQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 302 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 353
>gi|238579002|ref|XP_002388906.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
gi|215450629|gb|EEB89836.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
Length = 653
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 240/419 (57%), Gaps = 61/419 (14%)
Query: 26 PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDE--VFQCMFD 83
P +I+ KIP E+DNLYLD NGIIH C HP D A E +F +F
Sbjct: 4 PKLIEENKIP-----------EFDNLYLDFNGIIHNCSHPNDEDAHFRLSEEQIFTSIFA 52
Query: 84 YIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREG 143
Y+D LF +RP+KL +MA+DGVAPRAKMNQQRSRRFR +K+A + +R++ E +G
Sbjct: 53 YVDHLFGKIRPKKLFFMAVDGVAPRAKMNQQRSRRFRTAKEARE-------VREKAEAKG 105
Query: 144 RKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGE 203
KLP D + FDSN ITPGT FMA LS L+Y+++ ++ D W ++V+LS VPGE
Sbjct: 106 EKLP---DEKAFDSNCITPGTSFMAKLSEQLRYFVNKKITEDSNWRNVEVVLSGHEVPGE 162
Query: 204 GEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQD 262
GEHKIM Y+RL R P Y+PN RHCLYGLDADLIML L +H+ HF +LRE V F P
Sbjct: 163 GEHKIMEYIRLSRAQPDYNPNMRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGP---- 218
Query: 263 KCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--I 320
A++K E + + LH+ REYLD EF
Sbjct: 219 ------------------ARKKTNNSLESIN--------FYLLHLSLFREYLDTEFHSIA 252
Query: 321 PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT 380
P PF LE ++DDFI + FVGNDFLP++P L I E + + VYK+ +L GY+
Sbjct: 253 PALPFPYSLERVIDDFILLAVFVGNDFLPNLPDLHIHENGLERIFEVYKRVLPSLDGYVN 312
Query: 381 DGSKPSLRRVEHFIQAVGSYEDRIFQKR----ARLHQRHAERI-KREKAQARRGDDVEP 434
D ++ R++ + + ++E +F+K + + A ++ K E+A+ +G + P
Sbjct: 313 DSGTINMPRLQCILDEMATWEQEVFEKEYADMSWFKGKQASQLEKLEQARKNKGLILTP 371
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 110/174 (63%), Gaps = 6/174 (3%)
Query: 546 WKERYYEEKF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 603
WK YY K N +PEE + ++ RY EGL WVMHYY+ GV SW WFY YHYAP
Sbjct: 475 WKRDYYRTKLEINFDSPEEMGK----LIRRYAEGLQWVMHYYFSGVASWGWFYDYHYAPR 530
Query: 604 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
SDLK LD+ + FELG PFKPF QL+GV PSAS +P+ Y LM DP SPIS FYP
Sbjct: 531 ISDLKGLDEMSFDFELGKPFKPFEQLMGVLPSASKELVPQAYWPLMIDPVSPISHFYPLT 590
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
FE+D+NGK+ W+ I K+PFI+E LL + E+ L+ EE RNS F
Sbjct: 591 FELDLNGKKQDWEAIVKIPFINEKELLAAMSSRENLLSSEECGRNSFGTSTRFT 644
>gi|66514180|ref|XP_393481.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Apis mellifera]
Length = 1633
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 171/406 (42%), Positives = 235/406 (57%), Gaps = 64/406 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R++ E+YP + + +IP E+DNLYLD+NGIIH
Sbjct: 1 MGIPKFFRYINERYPCLTEK--------LKDYQIP-----------EFDNLYLDLNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D E +F+ +F YI LF M++P+KL ++AIDGVAPRAK+NQQRSRR
Sbjct: 42 ECSHPDDTDITFRISEEIIFKNIFRYIQVLFCMIQPQKLFFIAIDGVAPRAKINQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F+A+KDA +E + R + G LP + + FDSN ITPGT FM+ L L+Y+I
Sbjct: 102 FKAAKDAQ---IQEAKARAK----GINLPKE---KRFDSNCITPGTLFMSKLDEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K KVILS + VPGEGEHKIM Y+R + P YD NT+HCLYGLDADLIM
Sbjct: 152 TYKISTDKLWQKCKVILSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L THE+HF++LRE + F GK +RK E+
Sbjct: 212 LGLCTHEIHFTLLREELTF----------------------GKKQRKVCLTPEETK---- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ H+ LREY+++EF PF DLE I+DD+I M F +GNDF+PH+P L
Sbjct: 246 ----FCLFHLSLLREYINHEFSSLKEKLPFSYDLEKIIDDWILMGFLIGNDFIPHLPNLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
I GA+++L VY L GY+ + L R E F++ + ++
Sbjct: 302 IIHGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMERLSRFD 347
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 86/135 (63%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + W ++YYY G CSW W+YP+HYAP+ SD+KD + FELG PF PF QLL V
Sbjct: 459 YVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVL 518
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
PS S LP ++ L+T+ SPI ++YP++FE D+NGK W+ + +PFI+E LLD +
Sbjct: 519 PSYSKELLPSAFQTLLTEEQSPIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAM 578
Query: 694 KKIEHTLTEEEARRN 708
L+ EE RN
Sbjct: 579 APHYSKLSLEEQARN 593
>gi|353234672|emb|CCA66695.1| probable KEM1-5`-3` exonuclease component of cytoplasmic processing
(P) bodies [Piriformospora indica DSM 11827]
Length = 1438
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 165/379 (43%), Positives = 223/379 (58%), Gaps = 60/379 (15%)
Query: 49 DNLYLDMNGIIHPCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVA 106
DNLY+D NGIIH C HP D E +F +F Y++ LF ++PRK+ +MAIDGVA
Sbjct: 10 DNLYVDFNGIIHNCSHPNDGDVHFRLSEEQIFTSIFAYVEHLFTKIKPRKVFFMAIDGVA 69
Query: 107 PRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 166
PRAKMNQQRSRRFR +K+ D L ++ R+G KLP D + FDSN ITPGT F
Sbjct: 70 PRAKMNQQRSRRFRTAKETKD-------LVEKALRKGEKLP---DEKAFDSNCITPGTPF 119
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
MA LS+ LQY+++ ++ D W ++VILS VPGEGEHKIM Y+RL + Y+PNTR
Sbjct: 120 MARLSLQLQYFVNKKITEDSNWRDVQVILSGHEVPGEGEHKIMEYIRLSKAQKDYNPNTR 179
Query: 227 HCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKA 285
HCLYGLDADLIML L +H+ HF++LR EV F P +AK+K+
Sbjct: 180 HCLYGLDADLIMLGLLSHDPHFALLREEVKFGP---------------------QAKKKS 218
Query: 286 GEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR---------IPNP--------PFEID 328
G + + + LH+ REYL+ EF+ I +P PFE
Sbjct: 219 GTLETQS---------FFLLHLCLFREYLNLEFQPLWDPKAINIADPSASSKPILPFEYS 269
Query: 329 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 388
LE I+DDFI + FVGNDFLPH+P L I + A+ +L Y++ GGYL + +
Sbjct: 270 LERIIDDFILLAVFVGNDFLPHLPDLHIHDNALEVLFEKYRETLPKAGGYLNESGVINTE 329
Query: 389 RVEHFIQAVGSYEDRIFQK 407
R++ + A+ ++E + F+K
Sbjct: 330 RLQMVLDALATFEQQAFEK 348
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 126/202 (62%), Gaps = 4/202 (1%)
Query: 518 LKELLRDK--SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 575
LK+ R K D D E +K WK +YY+EK K ++ E +V RY
Sbjct: 482 LKKYARAKILEDEGTFDERYETTLKARMDNWKRQYYQEKLEIKYDDK--EAMDKLVYRYI 539
Query: 576 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 635
EGL WVMHYYY GV SW WFY YHYAP SDLK +D+ F+LG PF+P+ QL+GV P+
Sbjct: 540 EGLQWVMHYYYSGVASWGWFYDYHYAPRISDLKGVDKMKFDFKLGIPFRPYEQLMGVLPA 599
Query: 636 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 695
AS +P+ YR LM DP SPI DFYPTDFE D+NGK+ W+ I K+PFI+E RLL +
Sbjct: 600 ASQEHIPQAYRDLMYDPTSPILDFYPTDFESDLNGKKQEWEAIVKIPFINEQRLLQAMAS 659
Query: 696 IEHTLTEEEARRNSIMADMLFV 717
EH LT+EE RN++ + F
Sbjct: 660 REHRLTKEEKERNTVGTSLTFT 681
>gi|390353506|ref|XP_003728123.1| PREDICTED: 5'-3' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 1915
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 173/412 (41%), Positives = 236/412 (57%), Gaps = 62/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW +E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWQSERYP-CLSEVVKEN-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +++F+ +F YI+ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 TCTHPNDDDVHFRMTEEDMFKSIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR SA E E +E R+G LP D + FDSN ITPGT+FM L L+Y++
Sbjct: 102 FR-------SALEAEEREKEAVRKGETLP---DEKRFDSNCITPGTDFMVRLQRQLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ ++ D W+ I++ LS PGEGEHKIM ++R ++ +DPNTRHCLYGLDADLIM
Sbjct: 152 NTKITEDSKWQGIRIFLSGHETPGEGEHKIMDFIRAEKAQKEHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+Q AKR V
Sbjct: 212 LGLISHEPHFSLLREEVRF-GKQ-------------------AKRP----------TTVE 241
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ REYL EF + D ECI+DD++ + F VGNDF+P++P L I
Sbjct: 242 ETTFHLLHLSLFREYLALEFSAVKDQIDWFDAECIIDDWVLLGFLVGNDFVPNLPDLHIS 301
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
A+ LL Y K L GYL +G +L R E F++ + ++ F ++
Sbjct: 302 HSALPLLYKTYIKVLPTLDGYLNEGGHLNLPRFEKFMKELSKFDYENFDSQS 353
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 12/224 (5%)
Query: 500 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
EN++++ E K+ + KL+ + + +N + D++ E G E Y++ KF +T
Sbjct: 365 ENAWKSKKVEMKKAIREKLQAEIPGFMNMEWIENKDIDELSSDEEG--EDYFD-KFRKQT 421
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ +V Y + W++HYYY G+ SW W+YP+HY+P+ SDLKD ++ +
Sbjct: 422 AQ--------IVSDYIYAIQWILHYYYNGIQSWSWYYPHHYSPYMSDLKDFSDLVVTLDK 473
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
G PF PF QLL V P AS LP+ Y LM + NSPI ++YP +FE D+NGK +W+ +
Sbjct: 474 GQPFLPFEQLLAVLPPASRDHLPQAYHPLMLNENSPILEYYPLEFEQDLNGKLQAWEAVV 533
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL-LSHP 722
+PFIDE RL +K E LTE E +RN +L+ L++P
Sbjct: 534 LIPFIDENRLWAGMKMYEDKLTEAEKKRNCHSEHLLYTTDLANP 577
>gi|157876822|ref|XP_001686753.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
gi|68129828|emb|CAJ09134.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
Length = 895
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 228/720 (31%), Positives = 322/720 (44%), Gaps = 148/720 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV-VIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+ F+ WL Y D I+ P V+D + + YDN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWY----GDCIDNIPQDVVDAAFKGQALPHSHASAYSYDNFYVDMNGLI 56
Query: 60 HPCFHPEDRPAPTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
HPC H +E MFD +D L +VRP+K L + +DGVAPR+KMNQQRSRR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRR 116
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+ + +S A E LP + +D NVITP T FM +++AL++YI
Sbjct: 117 FRAADERLESDAISNACADSIVSE-YHLPRPRVRERWDHNVITPSTAFMERVALALEWYI 175
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+LN D W + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT H ++G+DADLI
Sbjct: 176 MKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMDADLIC 235
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+THE H ILR + Q D C
Sbjct: 236 LGLSTHEKHVCILRNQLTETFQPDHNRFC------------------------------- 264
Query: 299 KKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ ++ T RE L +F I FE +VDDFIF+CFFVGNDFLPH+P + I+
Sbjct: 265 -----YFNLSTYREKLMQDFANIEGMQFER----VVDDFIFLCFFVGNDFLPHVPLVSIK 315
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS---------YEDRIFQKR 408
I +L+ Y ++F AL GYLT + + F+ S Y + + +
Sbjct: 316 TRGIEMLLDHYVRDF-ALHGYLTQLGEVDYAHLHIFLMNFTSKCMMKLTKEYYG-VVRAK 373
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVG 468
R Q ER+ + +AQ VS G+ L P S Q+ V
Sbjct: 374 ERAKQHVEERVTKTEAQ------------------VSEVLGTLL---PDRSNAQE---VS 409
Query: 469 RLDNGKGTSGRPHKVPRLSSGATIGAAIVEA-------ENSFETDPQENKEEFKAKLK-- 519
G +S R + + +G + ++ ++ F DP N+ F+++++
Sbjct: 410 DALLGLMSSARKERTRFVVDKQPLGFSYLDKTYRDAYYQHKFGWDPSTNRAAFESQIRLC 469
Query: 520 --ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 577
E LR W RY YT+G
Sbjct: 470 CAEYLRGMQ-------------------WVMRY-----------------------YTKG 487
Query: 578 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSA 636
C +Y+ PYHYAP DL N+ + P P QLL V P
Sbjct: 488 -CPSWEWYF----------PYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRL 536
Query: 637 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
S HALPE + + DP S + FYP +VD + +S+QG+ ++PFI+ L +++
Sbjct: 537 SVHALPEELHEAVNDPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFINCEALSKACRQL 596
>gi|254582643|ref|XP_002499053.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
gi|238942627|emb|CAR30798.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
Length = 1526
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/436 (41%), Positives = 246/436 (56%), Gaps = 70/436 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F++++AE++P+++ +I+G IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFKYIAERWPMILQ--------LIEGQHIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF +F YID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 TCTHGNDDDVTKRLTEEEVFGKIFVYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ L++ E G ++P + FDSN ITPGTEFMA L+ LQY+I
Sbjct: 102 FRTAMDA------EKALKKAIEN-GEEIP---KGEPFDSNSITPGTEFMAKLTKNLQYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H ++ ND W +K+I S VPGEGEHKIM ++R R Y+PNTRHC+YGLDADLIM
Sbjct: 152 HDKITNDSSWRDVKIIFSGHEVPGEGEHKIMDFIRNIRGQGDYNPNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L L+ H HF++LR EVVF GK +K+ + +
Sbjct: 212 LGLSVHAPHFALLREEVVF----------------------GKRGKKSTALEHQN----- 244
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ LHI LREY++ EF FE D E I+DDFI + F +GNDFLP++P L
Sbjct: 245 ----FYLLHISLLREYMELEFEEIADELQFEYDFERILDDFILIMFVIGNDFLPNLPDLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR----ARL 411
+ + A LLM +K+ GY+ + +L+ + ++ + +E IF+K
Sbjct: 301 LNKEAFPLLMKTFKEALLHADGYINYNGQINLKTLRLWLHYLSQFELMIFEKNDIDVQWF 360
Query: 412 HQRHAERIKREKAQAR 427
HQR E I E A R
Sbjct: 361 HQR-LENISLEGADQR 375
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK+RYY+EK + + T D+ Y EGL WV++YYY G SW W+Y YHYAP S
Sbjct: 510 WKDRYYKEKLGFSIHDTEKLT--DITENYVEGLQWVLYYYYRGCASWGWYYHYHYAPRIS 567
Query: 606 DLK-DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
DL+ LDQ + FE G PF PF QL+ V P S + +P +R LM D SPI DFYP +
Sbjct: 568 DLQLGLDQI-LEFEKGIPFTPFQQLMAVLPERSKNLIPAPFRPLMYDEKSPIIDFYPAEV 626
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
+ D NGK W+ + + F+DE RL D + + LT +E RN+ D+++
Sbjct: 627 DTDKNGKTADWEAVVLISFVDEKRLQDAMAPLMSKLTPDEKARNTAGTDLIY 678
>gi|327267071|ref|XP_003218326.1| PREDICTED: 5'-3' exoribonuclease 1-like [Anolis carolinensis]
Length = 1744
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 240/410 (58%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP ++ V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSQVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + V LS PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLI+
Sbjct: 152 NMKISTDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKTKPDHDPNTRHCLYGLDADLII 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 212 LGLTSHEPHFSLLREEVRFGGK------------------------------KSQRVCAP 241
Query: 299 KK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF F ++E I+DD+I M F VGNDF+PH+P L
Sbjct: 242 EETTFHLLHLSLMREYIDYEFSPVKTKIKFPYEIEKIIDDWILMGFLVGNDFIPHLPHLH 301
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ +L Y L GY+ + +L R E ++ + ++ F
Sbjct: 302 INHDALPMLYRTYMAVLPELEGYINEKGHLNLPRFEKYLAKLSDFDREHF 351
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 3/178 (1%)
Query: 532 DNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
D PEED + E +K YY K + + + D Y + + W++HYYY GV
Sbjct: 420 DEPEEDDLFETEFRQYKRAYYMTKMGVEVVSD--DFLADQAKCYVQAIQWILHYYYHGVQ 477
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SW W+YPYHYAP+ SD++ + I +L PF PF QLL V P+AS LP+ Y+ LMT
Sbjct: 478 SWSWYYPYHYAPYLSDIRKIGDLKIYLDLEKPFMPFEQLLAVLPAASKDLLPKCYQHLMT 537
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
+SPI D+YPT+F+ D+NGK+ W+ + +PFIDE +LL+ ++ LT EE +RN
Sbjct: 538 SEDSPIIDYYPTEFKTDLNGKQQEWEAVVLIPFIDEKQLLEAMEPCNKLLTTEERQRN 595
>gi|358253113|dbj|GAA52094.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 1234
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/513 (36%), Positives = 281/513 (54%), Gaps = 52/513 (10%)
Query: 302 YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAI 361
+ F+H+ LREYL + ++ FE DLE ++DD++FMCFFVGNDFLPH+P+LEIREGAI
Sbjct: 249 FIFIHLNVLREYLAQDLKLTGLTFEWDLERVIDDWVFMCFFVGNDFLPHLPSLEIREGAI 308
Query: 362 NLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR----LHQRHAE 417
+ L+ +YK + GG+LT K + RV+ + +G ED IF+ R + +R +
Sbjct: 309 DRLIEIYKSAVQTTGGWLTHSGKVHMDRVQLIMVELGKMEDEIFKNRRQSELNFRKRKRD 368
Query: 418 RIKREKA-------------QARRGDDVEPL---AQPDSLVPVSRFHGSRLASGPSPSPY 461
R+ + A RG +EP+ + P R+ G +++
Sbjct: 369 NQSRDSSPSPQRMGQRPSWNTAPRGGILEPVPLGGRYGVAHPQGRYRGPSVSAAEIHQAR 428
Query: 462 Q-------QSECVGR-LDNGKGTSG-----RPHKVPRLSS-GATIGAAIVEAEN--SFET 505
Q + V R L+N + + RP + S+ G G+A+ A++ S
Sbjct: 429 QYHSNGSHNVDWVDRNLNNLEAATAMKAMLRPRRPGEKSTQGGPEGSALTSADDGPSPSR 488
Query: 506 DPQENKEEFKAKLKELLRD-------KSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFN 556
P+ + E+ + L + D K ++ D+ + D+V+L E GW+ RYY+ KF
Sbjct: 489 KPRLSIEQKRGLLGGVGADAVMKSLPKDSDYDQDDVADANDEVRLWEDGWRTRYYQSKFG 548
Query: 557 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 616
P + E V Y +GLCWV+ YYY+G SW W++PYHYAPFASD +DQ +
Sbjct: 549 VD-PADAPEFCIQVGKEYAKGLCWVLAYYYQGCASWDWYFPYHYAPFASDFIGIDQLDPG 607
Query: 617 FEL--GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
F+ PF+P QL+GVFP+ S +P ++ LMTDP+SPI DFYPTDF+VD+NGKRY
Sbjct: 608 FDKVKTQPFRPLEQLMGVFPADSRSHVPPAWQTLMTDPDSPIIDFYPTDFKVDLNGKRYL 667
Query: 675 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA---SIYTLD 731
W G+A LPF+DE RLL + + H L++EE RN D LF +HPL++ ++Y+ +
Sbjct: 668 WMGVALLPFVDEVRLLKALDERRHLLSDEEVARNIRGPDRLFCRDTHPLASALEALYSKN 727
Query: 732 EHCKQLKIKERV-EVKERLNPELSDGMNGYISP 763
E + V L+P L+ G++G++ P
Sbjct: 728 ETDLNTNSGKLVPNSASVLDPRLTHGVSGHVWP 760
>gi|50293237|ref|XP_449030.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528343|emb|CAG62000.1| unnamed protein product [Candida glabrata]
Length = 1522
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 243/406 (59%), Gaps = 63/406 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P+++ +I+G +IP E+DNLYLDMN IH
Sbjct: 1 MGIPKFFRYISERWPMILQ--------LIEGTQIP-----------EFDNLYLDMNSFIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D T + +E++ +F YID LF+M++P+K+ YM+IDGVAPRAKMNQQRSR
Sbjct: 42 TCTHGNDDEGVTQKMSDEELYSRIFTYIDHLFLMIKPKKVFYMSIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + D E+ Q+ EG ++P K D+ FDSN ITPGTEFMA L+ L YY
Sbjct: 102 RFRTAMDT-------EKALQKAMDEGEEIP-KGDA--FDSNCITPGTEFMAQLTRNLNYY 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
IH ++ ND W I+VILS VPGEGEHKIM ++R YD NTRHC+YGLDADLI
Sbjct: 152 IHDKVTNDANWRDIEVILSGHEVPGEGEHKIMDFIRNITAQEDYDVNTRHCIYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L+TH HF++LRE V T G+++ N K +
Sbjct: 212 MLGLSTHAPHFALLREEV-TFGRRN-------------NSRNKN---------------L 242
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ LREYL+ EF+ + FE D E I+DDFI + F +GNDFLP++P L
Sbjct: 243 EEQNFYLLHLSLLREYLELEFKEIGDDLQFEFDFENILDDFILVMFVIGNDFLPNLPDLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
+ +GA +L+ +K+ + GY+ + + + +R++ ++ + +E
Sbjct: 303 LNKGAFPVLLQTFKEALLHVDGYINERGQINFKRLKVWLDYLSQFE 348
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 103/174 (59%), Gaps = 4/174 (2%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
WK YY KF K E E ++ Y EGL WV++YYY+G SW W+Y +HYAP
Sbjct: 513 NWKAEYYRSKFGIKRDEP--ERIVEIANNYVEGLQWVLYYYYQGCPSWSWYYHFHYAPRI 570
Query: 605 SDL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
SDL K LDQ I FE G P PF QL+ V P S + LP YR LM DP SPI DFYP++
Sbjct: 571 SDLAKGLDQI-IKFEQGSPLTPFQQLMAVLPERSKNLLPAAYRPLMYDPKSPILDFYPSE 629
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
++D NGK W+ + LPF+DE RL++ L+ EE +RNS ++ F+
Sbjct: 630 VQLDKNGKTADWEAVVLLPFVDENRLIEATNHCLAKLSPEEKQRNSFGKNLTFM 683
>gi|410924239|ref|XP_003975589.1| PREDICTED: 5'-3' exoribonuclease 1-like [Takifugu rubripes]
Length = 1673
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 242/412 (58%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP ++++++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEIVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F +F Y++ LF +++P K+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYVEVLFRIIKPCKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A EE++++ ++ G LP ++ FDSN ITPGT+FMA L L+Y++
Sbjct: 102 FRSAKEA------EEKIKKALDK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLEYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ D W+ ++V LS PGEGEHKIM ++R + P +DPNTRHCLYGLDADLIM
Sbjct: 152 HNKVSTDKLWQNVRVYLSGHETPGEGEHKIMEFIRSENIKPDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE +FS+LRE V R G+ +K + P
Sbjct: 212 LGLTSHEPNFSLLREEV---------------------------RFGGKKSQK--RITAP 242
Query: 299 KK-PYQFLHIWTLREYLDYEFRIPNPPF--EIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + D E I+DD+I M F VGNDF+PH+P L
Sbjct: 243 EETTFHLLHLSLMREYIDYEFSVLRNHLGSNYDFERIIDDWILMGFLVGNDFIPHLPHLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y +LGGYL + +L+ E +++ + ++ F +
Sbjct: 303 ISHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFEKYMEKLSEFDREHFSE 354
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 95/135 (70%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y EG+ W++HYYY GV SW W+YPYHYAPF SD+K++ + ++F+LG PF PF QLL V
Sbjct: 452 YVEGIQWILHYYYHGVQSWSWYYPYHYAPFLSDIKNVAELKLTFDLGKPFMPFQQLLAVL 511
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS LPE YR LM NSPI ++YP DF+ D+NGK+ W+ + +PFIDE LL +
Sbjct: 512 PAASMELLPEAYRHLMNSENSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDERCLLAAM 571
Query: 694 KKIEHTLTEEEARRN 708
+ H LT++E RN
Sbjct: 572 EPWNHQLTKQERSRN 586
>gi|301762972|ref|XP_002916907.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ailuropoda melanoleuca]
Length = 1703
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/410 (40%), Positives = 241/410 (58%), Gaps = 67/410 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ G + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTXQG---VTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIM 208
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE HFS+LRE V G+ K V P
Sbjct: 209 LGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCAP 238
Query: 299 KK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 239 EETTFHLLHLSLMREYIDYEFSVLKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLH 298
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I A+ LL Y LGGY+ + +L R E ++ + ++ F
Sbjct: 299 INHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHF 348
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY K + + D Y + + W++HYYY GV SW W+YPYHYAPF S
Sbjct: 430 YKRTYYMTKMGVDVVSD--DFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLS 487
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++++ I FELG PFKPF QLL V P+AS + LP Y+ LMT +SPI ++YP DF+
Sbjct: 488 DIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQHLMTSEDSPIIEYYPPDFK 547
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 548 TDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 590
>gi|255072731|ref|XP_002500040.1| predicted protein [Micromonas sp. RCC299]
gi|226515302|gb|ACO61298.1| predicted protein [Micromonas sp. RCC299]
Length = 249
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/202 (72%), Positives = 172/202 (85%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPCFHPEDRPAPTT +EVF+C+FDYIDRLF M+RPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCFHPEDRPAPTTEEEVFECIFDYIDRLFAMIRPRKLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RSRRFRA+++A + E+E+LR++ REG +PP+ S+ FDSNVITPGT FM LS AL
Sbjct: 61 RSRRFRAAQEAKEKEEEDEKLREKLRREGVNVPPRQKSEAFDSNVITPGTPFMGRLSAAL 120
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
QYY+H R+N DP W +KVI+SDA+VPGEGEHK M Y+R QR L G+DPNT+H +YGLDA
Sbjct: 121 QYYVHQRMNTDPAWRGVKVIMSDASVPGEGEHKAMHYIRQQRGLKGFDPNTKHVVYGLDA 180
Query: 235 DLIMLALATHEVHFSILREVVF 256
DLIMLALATHE +F ILREVVF
Sbjct: 181 DLIMLALATHEPNFWILREVVF 202
>gi|123477106|ref|XP_001321722.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121904554|gb|EAY09499.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 702
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/410 (42%), Positives = 237/410 (57%), Gaps = 42/410 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNG---LEYDNLYLDMNG 57
MGVP+F+RWL YPL+++ IE E + D S+PNPN +E+DNLYLDMNG
Sbjct: 1 MGVPSFFRWLKGHYPLLLSQCIETE--------LDEDPSQPNPNTEGDVEFDNLYLDMNG 52
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
+IHPC+HP+++ P T+ EVFQ + Y+DR+F +VRPRK+L+MA+DGVAPRAKMNQQR R
Sbjct: 53 LIHPCYHPKNQEHPKTYLEVFQNVEKYVDRIFNLVRPRKVLFMAVDGVAPRAKMNQQRIR 112
Query: 118 RFRASKDAA-DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RF A+KD+ + + + L E + P++ Q D+N ITPGTEFM LS +
Sbjct: 113 RFCAAKDSEYNRYMQCQDLSITKEEIDEIMDPQTIIQS-DTNTITPGTEFMMQLSDYITE 171
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
I+ + P W I VI SDA+VPGEGEHKIM ++R QR YD + HC+YGLDAD
Sbjct: 172 MINRKQKTSPAWSNIAVIFSDASVPGEGEHKIMEFIRSQRVEFNYDFSRHHCVYGLDADF 231
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
+ L L+ HE+ F+ILRE VF N E AG F
Sbjct: 232 LFLGLSCHELFFTILREEVF-------------------NVENLTP-PAGRFG------- 264
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
P K + F + + R+YL+ + + F+ E +DD IF+C GNDFLP +P + I
Sbjct: 265 -PAK-FLFANGFVFRQYLERDLKPAKMGFDWYFERALDDIIFLCVTAGNDFLPQIPGMNI 322
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
G+I + +YKK LGGY+TD +R F+ ++ E+ Q
Sbjct: 323 LGGSIGKIFELYKKILPELGGYITDNGNVDCKRAAKFLHSLVDSEEIALQ 372
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
++RYY+EK E+ E KDV + Y +G+ W + YY G SW W+YPY+YAP S
Sbjct: 423 QQRYYKEKHGFD--EKDVEKVKDVCINYLKGMAWTLQYYLHGCTSWSWYYPYYYAPLLSS 480
Query: 607 LKDLDQFNISFEL---GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
+ L+ +I+ + P P QL+ V P SSH LP++ +LM SP+ +YPT
Sbjct: 481 FELLENLDINLSVLDDSKPIPPLEQLMSVLPPQSSHLLPQNMAELMKK-GSPLEKYYPTT 539
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
F +DM G W+GI +P ID L +K + LT+EE +RN +FV
Sbjct: 540 FSIDMMGGHQPWKGITFIPIIDGEFLEKTLKDSKIILTDEEEKRNKTGFVKVFV 593
>gi|448526146|ref|XP_003869280.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380353633|emb|CCG23144.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 1465
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 235/397 (59%), Gaps = 60/397 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL+ +ID +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLISQ--------LIDEKQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAP-TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H D + D+++ +F+YID LF +++P+K YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 TCTHSNDGSITRISDDQMYAAIFNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R + +A E L++ E G +LP K D FDSN ITPGTEFMA L+ L+Y++H
Sbjct: 102 RTAYEA------EINLKKAIEN-GDELP-KEDP--FDSNSITPGTEFMAKLTENLKYFVH 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++ D W I+++LS VPGEGEHKI ++R R+ GYDPN RHC+YGLDADLIML
Sbjct: 152 KKITEDSRWANIEIVLSGHEVPGEGEHKIQEFIRAVRSQDGYDPNLRHCIYGLDADLIML 211
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L +H+ HF++LRE V G K +G D V
Sbjct: 212 GLVSHDPHFALLREEV---------------------TFGNRKSSSGPKD-------VTD 243
Query: 300 KPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ +REYL+ EF+ FE D E ++DDFI + + +GNDFLPH+P L +
Sbjct: 244 QKFFLLHLSLVREYLELEFKEVEEQISFEYDFEKVLDDFILIMYVIGNDFLPHLPDLHLN 303
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI 394
+GA LL++ +K+ GY+ + K +LRR+ ++
Sbjct: 304 KGAFPLLISTFKQSLLQSDGYINEDGKINLRRLNIWV 340
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 130/226 (57%), Gaps = 18/226 (7%)
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNA 557
P E++E++ ++ EL R ++ + N E + LGE WK YYEEK N
Sbjct: 467 PSESEEDYDERISEL-RKAVKSYQTANLVESQDVLGETKGVYEEKFKSWKNNYYEEKLNF 525
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK-DLDQF--- 613
+ +E ++ Y EGL WV++YYY G SW ++Y YHYAP SD+ L++
Sbjct: 526 SI--DNKEKLTEMTEHYIEGLQWVLYYYYRGCPSWNFYYRYHYAPRISDISVGLEELIKK 583
Query: 614 --NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
+I+FE PFKPF QL+ V P+ S +P YR LMTD SPI FYP + ++DMNGK
Sbjct: 584 GVDITFEKSKPFKPFEQLMAVLPARSKKLMPAVYRPLMTDEKSPIIGFYPHEVDIDMNGK 643
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
SW+ + L F+DE +LLD +K IE LT EE +RNS ++ F+
Sbjct: 644 TASWEAVVLLDFVDEKKLLDALKPIESKLTPEETKRNSYGNNIKFI 689
>gi|384488412|gb|EIE80592.1| 5'-3' exoribonuclease 1 [Rhizopus delemar RA 99-880]
Length = 1739
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 219/362 (60%), Gaps = 46/362 (12%)
Query: 47 EYDNLYLDMNGIIHPCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDG 104
E+DNLYLDMNGI+H C H +D T +++++ +F Y+D LF ++P+KL ++AIDG
Sbjct: 504 EFDNLYLDMNGIVHNCSHNNSDDPHYRITEEQIWRGIFQYMDHLFSKIKPKKLFFVAIDG 563
Query: 105 VAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGT 164
VAPRAKMNQQRSRRFR +KDA D+ RQ+ +G +LP + FD+N ITPGT
Sbjct: 564 VAPRAKMNQQRSRRFRTAKDAEDA-------RQKALAKGEELP---EQDPFDTNCITPGT 613
Query: 165 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 224
EFM L+ L+Y+I +++ D W +++ILS VPGEGEHKIM Y+RL + P Y+PN
Sbjct: 614 EFMIKLTQQLRYFISKKVSEDADWRNVQIILSGPEVPGEGEHKIMEYIRLAKAQPDYNPN 673
Query: 225 TRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKR 283
TRHCLYGLDADL+ML L +H+ HF++LRE V F Q+ K L Q +L
Sbjct: 674 TRHCLYGLDADLLMLGLLSHDPHFALLREEVTFGRNQKKKIGLDNQNFYL---------- 723
Query: 284 KAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCF 341
LH+ +REYLD EF PF D E +VDDFI +
Sbjct: 724 ---------------------LHLCLIREYLDMEFSALKTTLPFPYDFERVVDDFILLAL 762
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
F+GNDFLPH+P + I EGA+ L+ +YK+ GYL DG + + R++ + + +
Sbjct: 763 FIGNDFLPHLPNIHINEGALGLMFKIYKETLPTCEGYLQDGGRVDMTRLQKVLDQISTVV 822
Query: 402 DR 403
++
Sbjct: 823 EK 824
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK YY++K N + +E + ++ Y G+ WV+ YYY GV SW WFYPYHYAP S
Sbjct: 1001 WKAEYYKDKMNIDINDSQEMEK--LIGSYVIGIQWVLQYYYNGVASWGWFYPYHYAPKIS 1058
Query: 606 DLKDLDQF-NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
DL ++ +F + +F LG PFKP+ QL+GV P S LP Y++LMTDP+SPI DFYPTDF
Sbjct: 1059 DLTNIVRFQDHTFTLGQPFKPYEQLMGVLPMLSKKLLPAAYQELMTDPSSPIIDFYPTDF 1118
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
++DMNGK+ SW+ I K+PFIDE RLLD +K EH LT++E
Sbjct: 1119 DMDMNGKKQSWEAIVKIPFIDEKRLLDAMKSREHRLTKDE 1158
>gi|198471055|ref|XP_001355485.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
gi|198145746|gb|EAL32544.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
Length = 1533
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/414 (39%), Positives = 242/414 (58%), Gaps = 68/414 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------SIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P+KL ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEQQIFQDIFNYVDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
FR++++A ++ A + R+E ER FDSN ITPGT+FM L L+
Sbjct: 102 FRSAREAEMLEAKALQRGERREHER-------------FDSNCITPGTDFMERLQQGLRC 148
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ +++ DP W+K VILS PGEGEHKIM Y+R + P +DPNTRHCLYGLDADL
Sbjct: 149 FLKTKISTDPLWQKCSVILSGQETPGEGEHKIMDYIRYMKAQPNFDPNTRHCLYGLDADL 208
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L THE+HF +LRE V +F
Sbjct: 209 IILGLCTHELHFVVLREEV-------------------------------KFGRNVKRAS 237
Query: 297 VPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
V + + LH+ LREYL+ EF ++ ++D+ ++DD++ M F VGNDF+PH+P L
Sbjct: 238 VEETRFFLLHLGLLREYLELEFHQLNTAQHKLDVAQLIDDWVLMGFMVGNDFIPHLPCLH 297
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
I A+ LL Y + + +LGG + + K +L+R++ F+ A+ E +++ A
Sbjct: 298 ISSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTALSEVELEQYKEHA 351
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGE-----PGWKERYYEEKFN--AKTPE 561
++ +++ + LK L+ D + +N D+ E+ + +K YY KFN ++ P
Sbjct: 372 DSSKDYDSDLKALIDDSTQLYNDDSDEDLSDEEAGVLKDFQNYKRNYYRNKFNLSSRPPN 431
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
+ E ++ Y L W++ YYY GV SW W+YP+HYAPF SDL ++ I F+LG
Sbjct: 432 QLIE---ELGHHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDLNNIATVQIKFQLGT 488
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
PF PF QLLGV P+AS LP Y LM P SP+++FYPTDF+ D+NGK++ W+ + +
Sbjct: 489 PFLPFEQLLGVLPAASFKLLPNAYHDLMLKPTSPLAEFYPTDFKSDLNGKKHDWEAVVLI 548
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRN 708
PFIDE LL ++ E L+ E RN
Sbjct: 549 PFIDECLLLSVMRPCEAHLSTAERARN 575
>gi|50312097|ref|XP_456080.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645216|emb|CAG98788.1| KLLA0F22385p [Kluyveromyces lactis]
Length = 1453
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 238/413 (57%), Gaps = 65/413 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+ +++E++P + +IDG +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFHFISERWPQISQ--------LIDGSQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + + +EV+ +F YID LF ++P++ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ Q+ G +LP + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAMDA-------EKALQKAIENGDELP---KGEPFDSNAITPGTEFMAKLTENLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H ++ ND W+ +KVI S VPGEGEHKIM Y+R R Y+PNTRHC+YGLDADLI+
Sbjct: 152 HDKITNDTRWQNVKVIFSGHEVPGEGEHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLII 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV-VV 297
L L+TH+ HF +LRE V F ++ V +
Sbjct: 212 LGLSTHDHHFCLLREEV-------------------------------TFGKRSSSVKTL 240
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + LH+ LREYL EF + FE D E ++DDFIF+ F +GNDFLP++P L
Sbjct: 241 ETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
+++GA +L+ +K+ + + GY+ + K +L R +++ + +E F+K+
Sbjct: 301 LKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKK 353
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 6/184 (3%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK++YY++K + + ++ K++ Y GL WV++YYY G SW W+Y YHYAP S
Sbjct: 511 WKDQYYKDKLDFSINDT--DSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRIS 568
Query: 606 D-LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
D +K +DQ NI F G PFKPF QL+ V P S + +P YR LM D +SPI DFYP +
Sbjct: 569 DVIKGIDQ-NIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEV 627
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS 724
E+D+NGK W+ + K+ F+D+ RL++ + + L+ +E +RNS D++F+ +P
Sbjct: 628 ELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIF--NPQV 685
Query: 725 ASIY 728
++Y
Sbjct: 686 DTVY 689
>gi|350402247|ref|XP_003486419.1| PREDICTED: 5'-3' exoribonuclease 1-like [Bombus impatiens]
Length = 1628
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/409 (40%), Positives = 236/409 (57%), Gaps = 62/409 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E+YP + + +IP E+DNLYLD+NGIIH
Sbjct: 1 MGIPKFFRYISERYPCLTEK--------LKDYQIP-----------EFDNLYLDVNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D E +F+ +F YI+ LF M++P+KL ++A+DGVAPRAK+NQQRSRR
Sbjct: 42 DCSHPDDTDITFRISEETIFKNIFRYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F+ +KDA +E++ + +G LP + + FDSN ITPGT FM+ L L+Y+I
Sbjct: 102 FKTAKDAK---IQEDKAK----VKGTILPKE---KRFDSNCITPGTVFMSKLDEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K KVI S + VPGEGEHKIM Y+R + YD NT+HCLYGLDADLIM
Sbjct: 152 TYKISTDKLWQKCKVIFSGSQVPGEGEHKIMDYIRYMKTQANYDVNTKHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE+HF++LRE + +Q K +C P
Sbjct: 212 LGLCTHEIHFTLLREELTFGKKQKK--VCLTP---------------------------E 242
Query: 299 KKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + H+ LREY+++EF PF +LE I+DD+I M F +GNDF+PH+P L I
Sbjct: 243 ETKFCLFHLSLLREYINHEFSSLKEKLPFPYNLENIIDDWILMGFLIGNDFIPHLPNLHI 302
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
GA+++L VYK L GY+ + L R E F++ + ++ F
Sbjct: 303 VHGALSVLYQVYKDVMPTLDGYINETGTLRLDRFEKFMERLSRFDTLQF 351
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 89/152 (58%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + W ++YYY G CSW W+YP+HYAP+ SD+KD + F+LG PF PF QLL V
Sbjct: 460 YVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGEPFLPFEQLLAVL 519
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
PS S LP ++ L+T+ SPI +YPT+FE D+NGK W+ + +PFI+E ++D +
Sbjct: 520 PSYSKDLLPPAFQTLLTEDQSPIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAM 579
Query: 694 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSA 725
+T EE RN LF L A
Sbjct: 580 APRYPQITPEERARNKHGPMCLFTYTEENLGA 611
>gi|300120088|emb|CBK19642.2| unnamed protein product [Blastocystis hominis]
Length = 574
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 258/440 (58%), Gaps = 26/440 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIE-EEPVVIDGVKIPVDTSKPNPNGLE------YDNLYL 53
MG+P + RWL KYPL++ + + + P DG +TS + +DN Y+
Sbjct: 1 MGIPTYTRWLCRKYPLILKSLSDPDSPAQRDG-----NTSSQQQQQQQQQQPPVFDNFYI 55
Query: 54 DMNGIIHPCFHPEDR-PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
DMNGIIH C H + P D+V + + +Y+DRL V PRKLL+M++DGVAP+AK+
Sbjct: 56 DMNGIIHDCAHGQILGSTPRNTDDVLENLQNYLDRLITAVNPRKLLFMSVDGVAPKAKVK 115
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPP---KSDSQVFDSNVITPGTEFMAV 169
+QR RRFR+ ++ + EE+L++E EG + PP + + + F+S I PGT+FM+
Sbjct: 116 EQRGRRFRSGYESVEIKQLEEQLKKEMIAEGFQFPPDVEEEEEESFNSLNIFPGTDFMSE 175
Query: 170 LSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCL 229
L + L YY+ L ++ + + V++SD++VPGEGEHKIM ++R QR P Y PN H +
Sbjct: 176 LQVFLDYYVTKTLQSNEKLQNLNVLISDSDVPGEGEHKIMEFIRSQRTQPDYLPNQTHII 235
Query: 230 YGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 289
+GLDADL MLAL++HE F IL E +F +C +CG P H C ++K G
Sbjct: 236 HGLDADLSMLALSSHEPLFYILVEQLFI----TRCAICGAPDHSTRECVKLPRKKLGA-S 290
Query: 290 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDF 347
K D+ +P Q + I TLR+YLD E R +I +LE I+DD++F+C FVGNDF
Sbjct: 291 TKDDKFY--HRPLQVISIKTLRDYLDLEMRPVASQMKIPYNLERIIDDYVFLCIFVGNDF 348
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD-GSKPSLRRVEHFIQAVGSYEDRIFQ 406
LP +P +IREGA+ +L+ +Y++ Y+ G + + +V+ ++ V + E I +
Sbjct: 349 LPSLPLFDIREGAVTMLLNLYRRLLPTWTDYIIRPGGEINYLQVQSLMREVYANEGNILR 408
Query: 407 KRARLHQRHAERIKREKAQA 426
++ + R+KR QA
Sbjct: 409 RKRLFGRYTVGRLKRPAVQA 428
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
+E+ V G+PGW + YY +KF P +R + V Y GL W+M YY G SW W
Sbjct: 438 DEESVDYGKPGWSDAYYRQKFGLD-PSDRVSIER-VCQEYMLGLAWIMRYYCTGCASWDW 495
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGV 632
FYP HYAP DL ++ +SF LG P ++ V
Sbjct: 496 FYPEHYAPLLRDLSAMNNVTVSFSLGQPISKLEAVIAV 533
>gi|327353279|gb|EGE82136.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 1440
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 174/413 (42%), Positives = 249/413 (60%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
>gi|261202580|ref|XP_002628504.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
gi|239590601|gb|EEQ73182.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
Length = 1440
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 174/413 (42%), Positives = 249/413 (60%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAIKQGIEM------PKEEA--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
>gi|340729609|ref|XP_003403090.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Bombus terrestris]
Length = 1626
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 247/448 (55%), Gaps = 65/448 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E+YP + + +IP E+DNLYLD+NGIIH
Sbjct: 1 MGIPKFFRYISERYPCLTEK--------LKDYQIP-----------EFDNLYLDVNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D E +F+ +F YI+ LF M++P+KL ++A+DGVAPRAK+NQQRSRR
Sbjct: 42 DCSHPDDMDITFRISEETIFKNIFHYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F+ +KDA +E++ + +G LP + + FDSN ITPGT FM+ L L+Y+I
Sbjct: 102 FKNAKDAK---IQEDKAK----IKGTTLPKE---KRFDSNCITPGTVFMSKLDEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K KVI S + VPGEGEHKIM Y+R + YD NT+HCLYGLDADLIM
Sbjct: 152 TYKISTDKLWQKCKVIFSGSQVPGEGEHKIMDYIRYMKTQANYDVNTKHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THEVHF++LRE V +Q K +C P
Sbjct: 212 LGLCTHEVHFTLLREEVTFGKKQXK--VCLTP---------------------------E 242
Query: 299 KKPYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + H+ LREY+++EF PF +LE I+DD+I M F +GNDF+PH+P L I
Sbjct: 243 ETKFCLFHLSLLREYINHEFSSLKEKLPFPYNLENIIDDWILMGFLIGNDFIPHLPNLHI 302
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR---ARLHQ 413
GA+++L VY L GY+ + L R E F++ + ++ F + + +
Sbjct: 303 VHGALSVLYQVYMDVMPTLDGYINETGTLRLDRFEKFMERLSRFDTLQFSEYYADLKYLE 362
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSL 441
R + E + +R E P +
Sbjct: 363 SKTGRTETENSNDKRSGSTEETRSPRKM 390
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 89/152 (58%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + W ++YYY G CSW W+YP+HYAP+ SD+KD + F+LG PF PF QLL V
Sbjct: 458 YVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLGEPFLPFEQLLAVL 517
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
PS S LP ++ L+T+ SPI +YPT+FE D+NGK W+ + +PFI+E ++D +
Sbjct: 518 PSYSKDLLPPAFQTLLTEDQSPIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAM 577
Query: 694 KKIEHTLTEEEARRNSIMADMLFVLLSHPLSA 725
+T EE RN LF L A
Sbjct: 578 APHYPQITPEERARNRHGPMCLFTYTEENLGA 609
>gi|239612327|gb|EEQ89314.1| exonuclease Kem1 [Ajellomyces dermatitidis ER-3]
Length = 1440
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 174/413 (42%), Positives = 249/413 (60%), Gaps = 66/413 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H +D +PT T D++F +F+YI+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA A+E+ ++Q E PK ++ FDSN ITPGTEFMA L+ L+Y+
Sbjct: 101 RFRTALDA--EVAKEKAIKQGVEM------PKEEA--FDSNCITPGTEFMAKLTQQLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ +++ D W+ ++++LS VPGEGEHKIM Y+R + PGY P+ RHCLYGLDADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+Q +++K+ E + +
Sbjct: 211 MLGLLSHDPHFCLLREEV-TFGRQ-------------------SQKKSKELEHQN----- 245
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ +H+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P
Sbjct: 246 ----FYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGNDFLPNLPN 301
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
L I EGA+ + +YK+ LGGY+ + +L R+ + ++ E R F+
Sbjct: 302 LHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFE 354
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 516 AKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYT 575
AK+KE + A + E K +L WK YY+ KF + EE RK + Y
Sbjct: 492 AKVKE-----TTAEEAQQAAEKKYELKFQEWKNDYYKSKFGWGL-DNHEEMRK-LTENYV 544
Query: 576 EGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPS 635
+GL WV++YYY GV SW WFY YHY+P SD+K + +++F+LG PF+PF QL+GV P
Sbjct: 545 QGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLGQPFRPFEQLMGVLPD 604
Query: 636 ASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 695
S +P + +LMT P SPI DFYP DFE+DMNGK+ W+ + K+PFIDE RLL +
Sbjct: 605 RSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLGAMAT 664
Query: 696 IEHTLTEEEARRNSIMADMLFV 717
+H LT E RN + F
Sbjct: 665 KQHLLTPAERARNEFGVTLKFT 686
>gi|4914494|emb|CAB43711.1| pacman protein [Drosophila melanogaster]
Length = 1613
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/412 (40%), Positives = 235/412 (57%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------CIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P++L ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +++A A+ + R E R FDSN ITPGTEFM L L+ ++
Sbjct: 102 FRTAREAEQQEAKAAQ-RGELREHER----------FDSNCITPGTEFMVRLQEGLRAFL 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ DP W++ VILS PGEGEHKIM Y+R + P YDPNTRHCLYGLDADLI+
Sbjct: 151 KTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLII 210
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE+HF +LRE V +F V
Sbjct: 211 LGLCTHELHFVVLREEV-------------------------------KFGRNVKRTSVE 239
Query: 299 KKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
A+ LL Y + LGG + + K +LRR++ FI A+ E F++ A
Sbjct: 300 SNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHA 351
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K +Y KF + +E +++ Y L WV+ YYY GV SW W+YP+HY PF
Sbjct: 413 NYKRNFYRNKFKR---DPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFI 469
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SDLK+++Q I+F +G PF PF QLL V P+AS+ LP Y LM P SP+++FYP +F
Sbjct: 470 SDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEF 529
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
E D+NGK++ W+ + +PFIDE RLL + E L+ EE RN
Sbjct: 530 ESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|24643245|ref|NP_523408.2| pacman, isoform A [Drosophila melanogaster]
gi|7293586|gb|AAF48958.1| pacman, isoform A [Drosophila melanogaster]
gi|15291661|gb|AAK93099.1| LD22664p [Drosophila melanogaster]
Length = 1612
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/412 (40%), Positives = 235/412 (57%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------CIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P++L ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +++A A+ + R E R FDSN ITPGTEFM L L+ ++
Sbjct: 102 FRTAREAEQQEAKAAQ-RGELREHER----------FDSNCITPGTEFMVRLQEGLRAFL 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ DP W++ VILS PGEGEHKIM Y+R + P YDPNTRHCLYGLDADLI+
Sbjct: 151 KTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLII 210
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE+HF +LRE V +F V
Sbjct: 211 LGLCTHELHFVVLREEV-------------------------------KFGRNVKRTSVE 239
Query: 299 KKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
A+ LL Y + LGG + + K +LRR++ FI A+ E F++ A
Sbjct: 300 SNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHA 351
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K +Y KF + +E +++ Y L WV+ YYY GV SW W+YP+HY PF
Sbjct: 413 NYKRNFYRNKFKR---DPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFI 469
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SDLK+++Q I+F +G PF PF QLL V P+AS+ LP Y LM P SP+++FYP +F
Sbjct: 470 SDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEF 529
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
E D+NGK++ W+ + +PFIDE RLL + E L+ EE RN
Sbjct: 530 ESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|281361106|ref|NP_001162796.1| pacman, isoform B [Drosophila melanogaster]
gi|272506169|gb|ACZ95330.1| pacman, isoform B [Drosophila melanogaster]
Length = 1613
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/412 (40%), Positives = 235/412 (57%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------CIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P++L ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +++A A+ + R E R FDSN ITPGTEFM L L+ ++
Sbjct: 102 FRTAREAEQQEAKAAQ-RGELREHER----------FDSNCITPGTEFMVRLQEGLRAFL 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ DP W++ VILS PGEGEHKIM Y+R + P YDPNTRHCLYGLDADLI+
Sbjct: 151 KTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLII 210
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE+HF +LRE V +F V
Sbjct: 211 LGLCTHELHFVVLREEV-------------------------------KFGRNVKRTSVE 239
Query: 299 KKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
A+ LL Y + LGG + + K +LRR++ FI A+ E F++ A
Sbjct: 300 SNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHA 351
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K +Y KF + +E +++ Y L WV+ YYY GV SW W+YP+HY PF
Sbjct: 413 NYKRNFYRNKFKR---DPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFI 469
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SDLK+++Q I+F +G PF PF QLL V P+AS+ LP Y LM P SP+++FYP +F
Sbjct: 470 SDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEF 529
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
E D+NGK++ W+ + +PFIDE RLL + E L+ EE RN
Sbjct: 530 ESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|354545919|emb|CCE42648.1| hypothetical protein CPAR2_202910 [Candida parapsilosis]
Length = 1481
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 234/397 (58%), Gaps = 60/397 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL+ ++D +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLISQ--------LVDEKQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAP-TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H D + D+++ +F+YID LF +++P+K YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 TCTHSNDGSITRISDDQMYAAIFNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R + +A E L++ E G +LP K D FDSN ITPGTEFMA L+ L+Y++H
Sbjct: 102 RTAYEA------EINLKKAIEN-GDELP-KEDP--FDSNSITPGTEFMAKLTENLKYFVH 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++ D W I+++LS VPGEGEHKI ++R R+ YDPN RHC+YGLDADLIML
Sbjct: 152 KKITEDSRWANIEIVLSGHEVPGEGEHKIQEFIRAVRSQDDYDPNLRHCIYGLDADLIML 211
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L +H+ HF++LRE V G K +G D V
Sbjct: 212 GLVSHDPHFALLREEV---------------------TFGNRKTSSGPKD-------VTD 243
Query: 300 KPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ +REYL+ EF+ FE D E ++DDFI + + +GNDFLPH+P L +
Sbjct: 244 QKFYLLHLSLVREYLELEFKEVEEQVDFEYDFEKVLDDFILIMYVIGNDFLPHLPDLHLN 303
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI 394
+GA LL++ +K+ GY+ + K +LRR+ ++
Sbjct: 304 KGAFPLLLSTFKQSLLQSDGYINEEGKINLRRLNIWV 340
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 132/226 (58%), Gaps = 18/226 (7%)
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP---------GWKERYYEEKFNA 557
P E++E++ ++ EL R ++ + N E + LGE WK YYEEK +
Sbjct: 467 PAESEEDYDERISEL-RKTVKSYQAANLVESQDVLGETKGVYEEKFKTWKNNYYEEKLHF 525
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLDQ- 612
P + +E ++ Y EGL WV++YYY G SW ++Y YHYAP SD L++L +
Sbjct: 526 --PIDDKEKLIEMTEHYVEGLQWVLYYYYRGCPSWNFYYKYHYAPRISDVSLGLEELIKK 583
Query: 613 -FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
+I+FE PFKPF QL+ V P+ S +P Y LMTD SPI DFYP + ++DMNGK
Sbjct: 584 GVDITFEKSKPFKPFEQLMAVLPARSKKLMPAAYWPLMTDEKSPIIDFYPHEVDIDMNGK 643
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
SW+ + L F+DE +LLD +K IE LT +E +RNS ++ F+
Sbjct: 644 TASWEAVVLLDFVDEKKLLDALKPIESKLTPQETKRNSYGHNIKFI 689
>gi|322812519|pdb|3PIE|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812520|pdb|3PIE|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812521|pdb|3PIE|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812522|pdb|3PIE|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812523|pdb|3PIF|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812524|pdb|3PIF|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812525|pdb|3PIF|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812526|pdb|3PIF|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
Length = 1155
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 164/413 (39%), Positives = 238/413 (57%), Gaps = 65/413 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+ +++E++P + +IDG +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFHFISERWPQISQ--------LIDGSQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + + +EV+ +F YID LF ++P++ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ Q+ G +LP + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAMDA-------EKALQKAIENGDELPK---GEPFDSNAITPGTEFMAKLTENLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H ++ ND W+ +KVI S VPGEG+HKIM Y+R R Y+PNTRHC+YGLDADLI+
Sbjct: 152 HDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLII 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV-VV 297
L L+TH+ HF +LRE V F ++ V +
Sbjct: 212 LGLSTHDHHFCLLREEV-------------------------------TFGKRSSSVKTL 240
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + LH+ LREYL EF + FE D E ++DDFIF+ F +GNDFLP++P L
Sbjct: 241 ETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
+++GA +L+ +K+ + + GY+ + K +L R +++ + +E F+K+
Sbjct: 301 LKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKK 353
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 6/184 (3%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK++YY++K + + ++ K++ Y GL WV++YYY G SW W+Y YHYAP S
Sbjct: 491 WKDQYYKDKLDFSINDT--DSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRIS 548
Query: 606 D-LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
D +K +DQ NI F G PFKPF QL+ V P S + +P YR LM D +SPI DFYP +
Sbjct: 549 DVIKGIDQ-NIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEV 607
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS 724
E+D+NGK W+ + K+ F+D+ RL++ + + L+ +E +RNS D++F+ +P
Sbjct: 608 ELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIF--NPQV 665
Query: 725 ASIY 728
++Y
Sbjct: 666 DTVY 669
>gi|403171712|ref|XP_003330904.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169305|gb|EFP86485.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 751
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 235/420 (55%), Gaps = 67/420 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+RW+ +KYP+V+ VI+ G IP E DNLYLDMNGIIH
Sbjct: 1 MGIPKFFRWMTQKYPVVLHQVIQ-------GDCIP-----------EIDNLYLDMNGIIH 42
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP A T E+F +F ++ LF + +P+KL +MA+DGVAPRAKMN+QRSRR
Sbjct: 43 NCSHPSTPTADFQITEPEIFSGIFAALEHLFTLAKPKKLFFMAVDGVAPRAKMNEQRSRR 102
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F+A++ A + R F R ++ S FDSN ITPGT FMA L L+Y+I
Sbjct: 103 FKAAQ-----ANQTMLQRNAFRRF------QTVSNSFDSNCITPGTPFMARLHEQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ ++ DP W+ ++VI S +VPGEGEHKIM Y+R + Y P+ RHC+YGLDADLIM
Sbjct: 152 NKKVTEDPAWQAVQVIFSGHDVPGEGEHKIMEYIRRAKTQQDYSPHIRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
LAL +HE HF +LRE E +A K + + +
Sbjct: 212 LALLSHEPHFCLLRE------------------------ENRAPLK------RKPTINLK 241
Query: 299 KKPYQFLHIWTLREYLDYEFR----IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ + I R+YL++EF I N F+ D+ I+DDFI +C FVGNDFLPH+P L
Sbjct: 242 DQQFHLFQISLFRDYLNWEFSSLQLIKN--FKYDIRRIIDDFILLCIFVGNDFLPHLPNL 299
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQR 414
I +GAI +L +YKK GGYL D R++ + + S+E + F+ +Q+
Sbjct: 300 HIDDGAIGVLFKIYKKILPQAGGYLNDSGTLHTHRLQLLLDELVSHEYQHFETSTGSNQK 359
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK +YY+ K + + + + + Y EGL W++ YYY GV SW W YPYHYAP S
Sbjct: 521 WKSKYYKNKMELQYNDSVQLHK--LTHAYVEGLQWILQYYYTGVASWSWAYPYHYAPMVS 578
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
DL + + SFELG PFKPF QL+GV P SS +P ++ LMT P+SPI D YPT FE
Sbjct: 579 DLNKVASYKFSFELGSPFKPFEQLMGVLPGLSSTHVPSAFQDLMTKPDSPILDLYPTSFE 638
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGKR+ WQ IAK+PFID RLL+ +K E+ L +EE RN
Sbjct: 639 TDLNGKRHEWQAIAKIPFIDSRRLLEAMKAHEYKLKDEEIERN 681
>gi|170043138|ref|XP_001849256.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
gi|167866570|gb|EDS29953.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
Length = 1609
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/409 (40%), Positives = 239/409 (58%), Gaps = 63/409 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP + +++ E ++P ++DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYMSERYP-CLGELVREN-------QVP-----------DFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +++F +F Y++ LF M+RP+KL ++A+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDSDVFFRITEEQIFSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++++A + ++ E++G LP ++ FDSN ITPGT FM L AL+++I
Sbjct: 102 FRSAREAQEQV-------EQAEKKGDVLPLEAR---FDSNCITPGTSFMVRLQRALEHFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++++ +P W+ KV+LS PGEGEHKIM Y+R + PG+D NTRHCLYGLDADLIM
Sbjct: 152 KVKVSTNPLWKHCKVVLSGHETPGEGEHKIMEYIRHAKASPGFDSNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE HFS+LRE V K G+ D+K +V
Sbjct: 212 LGLCTHERHFSLLREEV----------------------------KFGKNDKKSS--IVE 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ LREYL+ EF FE + ++DD++ M + VGNDF+PH+P L I
Sbjct: 242 ETRFYLLHLTLLREYLELEFAPVRDKLKFEFNPYKLIDDWVLMGYMVGNDFIPHLPNLHI 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
E A+ L Y L GY+ +G +L R+E ++ + ++ IF
Sbjct: 302 NENALPTLFQAYMDVLPGLDGYINEGGILNLERLEVLMERLARFDRDIF 350
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 142/268 (52%), Gaps = 22/268 (8%)
Query: 490 ATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE-----------EDK 538
A GA EA F+ +E K + L L++ D F D+ + E+
Sbjct: 362 AKRGANDTEA---FDVTLEEIKADMDMDLSALIKASEDMFLDDDEDGGGERYSTEDIEND 418
Query: 539 VKLGE---PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
+L E +K YY K + EETR + Y L W + YYY GV SW W+
Sbjct: 419 PELFEKEFAAYKRNYYMTKMGYG--DFNEETRAEQAECYIRALQWTLLYYYRGVSSWAWY 476
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
YP+HYAPF SD+++ ++FE+G PF PF QLL V P+AS LP Y KLMTDP+S
Sbjct: 477 YPHHYAPFISDVQNFKNIKLNFEMGKPFLPFQQLLSVLPAASKDHLPTAYHKLMTDPDSS 536
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
+ D+YP +F D+NGK+ +W+ + +PFIDE RLL ++ + LT+EE +RN ML
Sbjct: 537 VIDYYPENFGTDLNGKQQAWEAVVLIPFIDEKRLLKAMEPCDAFLTDEEKQRNVHGPMML 596
Query: 716 FVL--LSHPLSASIYTLDEHCKQLKIKE 741
F + Y LD+ +LK+KE
Sbjct: 597 FQYDEQGSAFLGANYGLDD-VAELKVKE 623
>gi|403368617|gb|EJY84145.1| 5'-3' exoribonuclease 2 [Oxytricha trifallax]
Length = 1735
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 246/430 (57%), Gaps = 68/430 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F++WL +YP V+ D+ EE V P+D NLYLD+NGI+H
Sbjct: 1 MGIPKFFKWLTRRYPQVLLDIKREEQVP------PID------------NLYLDLNGIVH 42
Query: 61 PCFHPEDR------PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
C H D F+EV+ + ID L ++P+KLL++A+DGVAPRAKMNQQ
Sbjct: 43 NCIHGNDAKLHERVSQLENFEEVWINIMKAIDELVHTIKPKKLLFLAVDGVAPRAKMNQQ 102
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
R+RRFR +KD+ + L+ +F++EG++ P +FDSN I+PGT+FM LS L
Sbjct: 103 RARRFRTAKDS-------QLLKDKFQKEGKEAPT-----LFDSNAISPGTKFMEELSKQL 150
Query: 175 QYYIHLRLNNDPGWEKI-KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
+++ + N DP ++ + KVILSDA VPGEGEHK+M ++R ++ YDPNTRHC YG D
Sbjct: 151 DFFVQYKQNTDPVYQNLEKVILSDAFVPGEGEHKMMDFIRQAKHDENYDPNTRHCFYGAD 210
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC-EGKAKRKAGEFDEKG 292
ADLIML+L THE +F ILRE H+ +G +R D K
Sbjct: 211 ADLIMLSLLTHEPNFIILRE-----------------EHVVRKIKQGGVQR----LDLKR 249
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
YQ + I LREY E+R P + DLE I+DDF+F CFF+GNDFLP
Sbjct: 250 ------TNNYQVMFINLLREYFLLEYRAVAPQMKMKFDLERIIDDFVFFCFFIGNDFLPS 303
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA- 409
+ L+I EG+++ ++ +YK+ ++ Y+T+ + R E FI+ +G +E F+ R
Sbjct: 304 LSALDIGEGSLDSIIDLYKRLLPSMENYITEEGRIYWDRAEPFIKMLGEHEHDSFKNRVN 363
Query: 410 RLHQRHAERI 419
++ ERI
Sbjct: 364 KIGAMRNERI 373
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 119/232 (51%), Gaps = 25/232 (10%)
Query: 513 EFKAKLKELLRDKSDAFNSDNPEE-DKVKLGEP-GWKERYYEEK--FNAKTPEEREETRK 568
E K K+ L+DK + N + +E K+ EP K YY K F+ T E R +K
Sbjct: 532 ENKVKVSMDLQDKYEQQNFEFMQEFIKLYQNEPENAKAMYYRAKVKFDVTTIEGRS-LKK 590
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD------------LDQFNIS 616
++++Y EGL WV++YYY G W+W+YPYHYAP SDL + +D+F I
Sbjct: 591 KMLMKYLEGLQWVLYYYYRGAQHWRWYYPYHYAPMISDLDENIVNNFLGGKRYIDEFEID 650
Query: 617 F---ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
++ P+ PF QLL + P+ S H LP Y K++ + ++P +F++D+NG+
Sbjct: 651 HNCADINEPYTPFQQLLSILPAKSLHLLPSQYAKIVL---GELRQYFPDEFDIDLNGRTL 707
Query: 674 SWQGIAKLPFIDEARLLDEVKKI--EHTLTEEEARRNSIMADMLFVLLSHPL 723
+++ +PF DE + + + ++ L + + RN + D H L
Sbjct: 708 AYEAACLIPFCDEKLFIGQETSLLRDNPLNDHDDSRNIVAFDYKVYTYDHLL 759
>gi|46124843|ref|XP_386975.1| hypothetical protein FG06799.1 [Gibberella zeae PH-1]
Length = 1370
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 245/437 (56%), Gaps = 78/437 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHP---EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H ED + +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E+ R + EG ++P + + FDSN ITPGTEFMA LS L+Y+
Sbjct: 102 RFRTALDA-------EKARDKAISEGVEIPKE---EPFDSNCITPGTEFMAKLSQQLRYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLYGLDADLI
Sbjct: 152 VNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +H+ HF +LRE V T G+ +K K+ E + +
Sbjct: 212 MLGLLSHDPHFCLLREEV-TFGR-------------------ASKSKSKELEHQN----- 246
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ LH+ +REYL+ EF+ F DLE ++DDFI M FFVGNDFLP++P+
Sbjct: 247 ----FYLLHLCIVREYLEMEFQELGEEGALSFPFDLERVIDDFILMAFFVGNDFLPNLPS 302
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF-------- 405
L I EGA+ + +YK GY+ + ++ R++ + + + E F
Sbjct: 303 LHINEGALANMFRIYKSILPKCDGYINENGVINMGRLQRLLGELSNTEIDAFESDVSDEK 362
Query: 406 -----QKRARLHQRHAE 417
Q RL +HAE
Sbjct: 363 WYASKQMEKRLENKHAE 379
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 87/173 (50%), Gaps = 35/173 (20%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
GWK +YY +KF P+ Y + L + Y +GV +
Sbjct: 510 GWKTKYYLQKFEEWAPDS-----------YDKELTAL--YVVKGVGA------------- 543
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
+++F+ G PF P+ QL+GV P S +P+ Y LMT+P+SPI DFYP DF
Sbjct: 544 ---------DLNFKKGQPFLPYEQLMGVLPDRSKKIVPKVYHDLMTNPDSPIVDFYPRDF 594
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
E+DMNGK+ W+ + K+PFIDE RLLD ++ L +E RN + F
Sbjct: 595 ELDMNGKKMDWEAVIKIPFIDEKRLLDAMRPKNELLEPDEKARNGFGVPLKFT 647
>gi|452822189|gb|EME29211.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 571
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/415 (41%), Positives = 234/415 (56%), Gaps = 66/415 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P FYRWL+E++P++ ++ E E+DN YLDMNGIIH
Sbjct: 1 MGIPKFYRWLSERFPVINQELETE---------------------YEFDNFYLDMNGIIH 39
Query: 61 PCFHPED--RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + + +E+F +F+Y DRL+ +V+P+KLL++A+DGVAPRAKMNQQRSRR
Sbjct: 40 LCTHNNNSLQLVWNNVEEMFDSIFEYTDRLYRIVKPKKLLFLAVDGVAPRAKMNQQRSRR 99
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++KDA + AE +E + R FDSN ITPGTEFM VLS + +I
Sbjct: 100 FRSAKDAEKALAEAIERGEEIKSSSR----------FDSNCITPGTEFMHVLSQRFKDWI 149
Query: 179 HLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
+DP W++ +I S +VPGEGEHKIM ++R + +HCLYGLDADLI
Sbjct: 150 SFMTTHDPAWQQGCDIIFSGPDVPGEGEHKIMDFIRTHTEDKEW-TERKHCLYGLDADLI 208
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L TH HFS+LRE ++ +G+A + F+E
Sbjct: 209 MLGLVTHFPHFSLLRE-----------------KYVIQKKDGEANKPKFFFEE------- 244
Query: 298 PKKPYQFLHIWTLREYLDYEFR---IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ FL + LR+ L EF+ F DLE +VDDF+FMC FVGNDFLP++P L
Sbjct: 245 ----FHFLQLALLRDMLYLEFKPFGDTELSFAYDLERVVDDFVFMCIFVGNDFLPNLPHL 300
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
+I GA+N++ AVYK +GGYLT+ + +R E F+Q V E FQ RA
Sbjct: 301 DINTGALNVMFAVYKSLLPQMGGYLTERHRIHPKRTEWFLQQVAKAERAYFQYRA 355
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
Query: 539 VKLGEPG-----WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
V+ EPG +K YY+ K + EE + R ++ +Y EGL +++ YYY+G SW+
Sbjct: 356 VEENEPGFLGDEYKSYYYQSKLGIRMEEEPHKVR-ELCQKYYEGLHFILQYYYQGCPSWK 414
Query: 594 WFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
WFYP YAP ASD+ L++ + FE GHPF+P QLL V P SS LPE R LM
Sbjct: 415 WFYPSFYAPLASDMVQLEEIRVEFEQGHPFRPLTQLLAVLPPESSSFLPEPLRNLMISDL 474
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE--HTLTEEEARRN 708
SP++++YP DFEVD+NGKR SW+ I +PFIDE RLL+ + ++ LT+EE RN
Sbjct: 475 SPLNEYYPPDFEVDLNGKRNSWEAIVLIPFIDENRLLNALATVDTRTELTDEERCRN 531
>gi|403216681|emb|CCK71177.1| hypothetical protein KNAG_0G01190 [Kazachstania naganishii CBS
8797]
Length = 1493
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/413 (40%), Positives = 246/413 (59%), Gaps = 63/413 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P++ +I+G +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMISQ--------LIEGSQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T +EVF +F YID LF+ ++P+K+ YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDDDVTKRMTEEEVFAKIFSYIDHLFLTIKPQKVFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E L++ +R G ++P + FDSN ITPGTEFMA L+ L+Y+I
Sbjct: 102 FRTAMDA------ENMLKKALQR-GEEIP---SGEPFDSNSITPGTEFMAKLTKNLKYFI 151
Query: 179 HLRLNNDPGWE-KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
H +++ND W +++I S VPG G HKIMS++R R+ G+D NTRHC+YGLDADLI
Sbjct: 152 HDKISNDSNWSGDVEIIFSGHEVPGRGRHKIMSFIRNLRSQDGFDNNTRHCIYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML+L+ H HF++LRE V G++ GQ + KA E
Sbjct: 212 MLSLSAHAPHFALLREEVVFGGRR------GQ------------RPKALE---------- 243
Query: 298 PKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LHI LREY+ EF+ F D E ++DDFI + F +GNDFLP++P L
Sbjct: 244 -EQNFFLLHISLLREYMGLEFQEIADELKFTYDFERVLDDFILVMFVIGNDFLPNLPDLH 302
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
+ +GA +L+ +K+ L GY+ + + +L R++ ++ + +E F+++
Sbjct: 303 LNKGAFPVLLQTFKEALLHLDGYINENGQINLHRLKVWLDYLSQFELMNFERK 355
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 111/184 (60%), Gaps = 6/184 (3%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK +YY+EK + ++ + D+ Y EGL WV++YYY G SW W+Y +HYAP S
Sbjct: 515 WKNQYYKEKLGYGSQDDDKIV--DLTKNYVEGLQWVLYYYYRGCPSWGWYYQHHYAPRIS 572
Query: 606 DL-KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
DL + LDQ I F+LG PF PF QL+ V P S + +P R LM DPNSPI DFYP
Sbjct: 573 DLARGLDQI-IKFDLGRPFTPFEQLMAVLPERSKNLIPAALRPLMYDPNSPIIDFYPASV 631
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS 724
++DMNGK W+ + L F+DE RL++ +K LT EE RNS D+ F +P +
Sbjct: 632 KLDMNGKTADWEAVVLLSFVDEQRLVEAMKPYLAKLTPEERERNSFGVDLRFAF--NPQT 689
Query: 725 ASIY 728
++Y
Sbjct: 690 DNVY 693
>gi|62321273|dbj|BAD94484.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 133/208 (63%), Positives = 161/208 (77%)
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHAL 641
MHYYY GVCSW WFYPYHYAPFASDLK L++ +I FELG PFKPFNQLL V PSAS+HAL
Sbjct: 1 MHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHAL 60
Query: 642 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 701
PE YR LMT+P+SPI+DFYP DFE+DMNGKRYSWQGI+KLPF++E RLL+ ++E +LT
Sbjct: 61 PECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLT 120
Query: 702 EEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYI 761
EE RRNS + DMLFV+ SHPL I +L+ L +ER + E+++P LSDGMNGYI
Sbjct: 121 NEEIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYI 180
Query: 762 SPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+ C GD P F S V MED++ NQV+
Sbjct: 181 ASCGGDSQPSCFCSTVEGMEDVLTNQVI 208
>gi|294951471|ref|XP_002786997.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239901587|gb|EER18793.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 728
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 171/374 (45%), Positives = 222/374 (59%), Gaps = 66/374 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRWL+E+YPL+ +VIE E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPRFYRWLSERYPLI-NEVIEPE-------QIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H + DEV+ +F YI LF ++P+KLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 42 HCSHGDTPDVAKPEDEVWMDIFKYISDLFTHIKPKKLLYMAVDGVAPRAKMNQQRSRRFR 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ DA ++ ER + + PKS FDSN ITPGT FM L++ L+++
Sbjct: 102 TALDAVEAT---ERAVKNGDH------PKSIDTFFDSNSITPGTAFMERLTVQLRFFAQK 152
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
++ +P W+ ++V++S NVPGEGEHKIM Y+R ++ P YDPNTRHC+YGLDADLIML+
Sbjct: 153 MISENPLWQGVEVVVSGPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVYGLDADLIMLS 212
Query: 241 LATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE + ++LR EV+F P + D L +P L
Sbjct: 213 LATHEPYVALLREEVIFGPEKTDARALV-RPDRL-------------------------- 245
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Q LHI+ LREYL EF E DLE ++DDF+ C VGNDFLPH+P + +G
Sbjct: 246 ---QLLHIYVLREYLALEFG------EEDLERVIDDFVLFCMLVGNDFLPHLPYTGVGDG 296
Query: 360 AINLLMAVYKKEFR 373
+ L Y KE+R
Sbjct: 297 GLERLFGAY-KEYR 309
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 549 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL- 607
++Y+ K E +E +D Y EGL W YYY G SW W+Y +HYAPF +
Sbjct: 413 QFYKVKGECDDKAEVDELVRD----YLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMV 468
Query: 608 KDLDQF-----NISFELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYP 661
D D F I F+ G P PF QL+ V P++S LP+ + KL T +SP+ +YP
Sbjct: 469 NDFDDFVAAGGQIKFDGGGPVTPFQQLMTVLPASSGQRLLPKIFAKLFTSSSSPVKQYYP 528
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV--------KKIEHTLTEEEARRN 708
F++D++G + W G + F+DE L D + + + LTE E RN
Sbjct: 529 ERFDIDIDGVKAPWGGTTLINFVDEDVLFDAMNAAIAESERTGQDVLTEAEKERN 583
>gi|294872967|ref|XP_002766468.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239867348|gb|EEQ99185.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 649
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 171/374 (45%), Positives = 223/374 (59%), Gaps = 66/374 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRWL+E+YPL+ +VIE E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPRFYRWLSERYPLI-NEVIEPE-------QIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H + DEV+ +F YI LF ++P+KLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 42 HCSHGDTPDVAKPEDEVWMDIFKYISDLFTHIKPKKLLYMAVDGVAPRAKMNQQRSRRFR 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ DA ++ ER + + PKS FDSN ITPGT FM L++ L+++
Sbjct: 102 TALDAVEAT---ERAVKNGDH------PKSIDTFFDSNSITPGTAFMERLTVQLRFFAQK 152
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
++ +P W+ ++V++S NVPGEGEHKIM Y+R ++ P YDPNTRHC+YGLDADLIML+
Sbjct: 153 MISENPLWQGVEVVVSGPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVYGLDADLIMLS 212
Query: 241 LATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE + ++LR EV+F P + D L +P L
Sbjct: 213 LATHEPYVALLREEVIFGPEKTDARALV-RPDRL-------------------------- 245
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
Q LHI+ LREYL EF E DLE ++DDF+ C VGNDFLPH+P + +G
Sbjct: 246 ---QLLHIYVLREYLALEFG------EEDLERVIDDFVLFCMLVGNDFLPHLPYTGVGDG 296
Query: 360 AINLLMAVYKKEFR 373
+ L + Y KE+R
Sbjct: 297 GLERLFSAY-KEYR 309
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 549 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL- 607
++Y+ K E +E +D Y EGL W YYY G SW W+Y +HYAPF +
Sbjct: 413 QFYKVKGECDDKAEVDELVRD----YLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMV 468
Query: 608 KDLDQF-----NISFELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYP 661
D D F I F+ G P PF QL+ V P++S LP+ + KL T +SP+ +YP
Sbjct: 469 NDFDDFVTAGGQIKFDGGGPVTPFQQLMTVLPASSGQRLLPKIFAKLFTSSSSPVKQYYP 528
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV--------KKIEHTLTEEEARRN 708
F++D++G + W G + F+DE L D + + + LTE E RN
Sbjct: 529 ERFDIDIDGVKVPWGGTTLINFVDEDVLFDAMNAAIAESERTGQDALTEAEKERN 583
>gi|195345705|ref|XP_002039409.1| GM22742 [Drosophila sechellia]
gi|194134635|gb|EDW56151.1| GM22742 [Drosophila sechellia]
Length = 1585
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 237/412 (57%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------SIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P++L ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEQQIFQEIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR SA E E+L + + G + + FDSN ITPGT FM L L+ ++
Sbjct: 102 FR-------SAREAEQLETKAAQRGEW----REHERFDSNCITPGTVFMGRLQKGLRAFL 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ DP W++ VILS VPGEGEHKIM Y+R + P +DPNTRHC+YGLDADLI+
Sbjct: 151 KTKISTDPLWQRCSVILSGQEVPGEGEHKIMDYIRYMKAQPDFDPNTRHCIYGLDADLII 210
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE+HF +LRE V +F V
Sbjct: 211 LGLCTHELHFVVLREEV-------------------------------KFGRNVKRTSVE 239
Query: 299 KKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTVEHKLDVAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
A+ LL Y + + LGG + + K +LRR++ F+ A+ E F++ A
Sbjct: 300 SNALPLLYRTYIRIYPTLGGNINENGKLNLRRLQIFMSALTEVELEHFKEHA 351
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K +Y KF + + + +++ Y L WV+ YYY GV SW W+YP+HY+PF
Sbjct: 412 NYKRNFYRNKFKR---DPQSDLLEELGHHYVNALQWVLDYYYRGVQSWDWYYPFHYSPFI 468
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SDLK+++Q I+F LG PF PF QLL V P+AS+ LP Y LM P+SP++DFYP +F
Sbjct: 469 SDLKNIEQVEIAFHLGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPSSPLADFYPLEF 528
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
E D+NGK++ W+ + +PFIDE RLL+ + E L+ EE RN
Sbjct: 529 ESDLNGKKHDWEAVVLIPFIDERRLLNAMLPCEAQLSLEERERN 572
>gi|396497754|ref|XP_003845052.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
gi|312221633|emb|CBY01573.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
Length = 1425
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 182/462 (39%), Positives = 263/462 (56%), Gaps = 68/462 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPGISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H ++ T + D++F +F+YI+ LF ++P++L++MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHNDNDSVTTRKSEDKMFISIFNYIEHLFGKIKPKQLIFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + DA E+ R++ REG ++P + + FDSN ITPGT FMA L+ L+Y+I
Sbjct: 102 FRTALDA-------EKAREKAIREGVEMPTE---EAFDSNCITPGTAFMAKLTQQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +++ D W+ ++V+LS VPGEGEHKIM Y+R + P YDPN RHCLYGLDADLIM
Sbjct: 152 NKKISEDLDWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPDYDPNRRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HFS+LRE V T G+Q + K+ E + +
Sbjct: 212 LGLLSHDPHFSLLREEV-TFGRQSQT-------------------KSKELEHQN------ 245
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
+ +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGNDFLP++P L
Sbjct: 246 ---FYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFLPNLPHL 302
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ-KRARLHQ 413
I EGA+ L+ VYK GY+ + ++ R+ + + E R F+ + A
Sbjct: 303 HINEGALALMFNVYKTVLPKAKGYINEEGVINMERLALLLDELSQIEYRHFESENADAAW 362
Query: 414 RHAERIKREKAQ---ARRGDDVEPLAQPDSLVPVSRFHGSRL 452
+R+ +E A+RG V Q + V + + L
Sbjct: 363 FKGKRLGKEDVMVKTAKRGTVVMSTQQKELFSKVKSWLSTYL 404
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
WK YY+ KF+ E EE RK + Y +GL WV++YYY GV SW W+Y YHY+P
Sbjct: 511 AWKNDYYKSKFDWDRSNE-EELRK-LTENYVQGLQWVLYYYYRGVASWPWYYGYHYSPMI 568
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD+K + +I+F+LG PFKPF QL+GV P S +PE Y LMT +SPI DFYP DF
Sbjct: 569 SDVKRGLKADINFKLGQPFKPFQQLMGVLPDRSKSIVPEAYHPLMTSEDSPIIDFYPRDF 628
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLL 719
+DMNGK+ W+ + K+PFI E RLL + EH LT +E RN + F +
Sbjct: 629 TLDMNGKKQDWEAVVKIPFIQEDRLLSAMATKEHNLTADEKSRNGFGVSLKFTYV 683
>gi|367003924|ref|XP_003686695.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
gi|357524997|emb|CCE64261.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
Length = 1492
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/412 (40%), Positives = 243/412 (58%), Gaps = 62/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL++ +I+ +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPLILQ--------LIENDQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCFHPEDRPAP---TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D + +EV+ +F YID L ++P+K+ YMAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHGNDMDNTRQRLSEEEVYAKIFAYIDHLLNTIKPKKVFYMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RFR + DA E L++ G +LP + FDSN ITPGTEFMA L+ L+Y+
Sbjct: 102 RFRTAMDA------ETALKKAIAN-GDELP---KGEPFDSNSITPGTEFMAKLTRNLKYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
IH +++ND W+ I+V+ S VPGEGEHKIM ++R R+ Y+ NTRHC+YGLDADLI
Sbjct: 152 IHDKISNDLNWQNIEVVFSGHEVPGEGEHKIMDFIRNLRSQKDYEQNTRHCIYGLDADLI 211
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L+TH+ HFS+LRE V G+++ G L +
Sbjct: 212 MLGLSTHDPHFSLLREEVKFGGRRNNS------GSLP----------------------L 243
Query: 298 PKKPYQFLHIWTLREYLDYEF--RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
K+ + LH+ LREY++ EF N F+ + + I+DDFI + F +GNDFLP++P L
Sbjct: 244 EKQNFYLLHLSLLREYMNLEFIEISTNLQFKYEFDRILDDFILIMFVIGNDFLPNLPDLH 303
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
+ +GA +++ +K+ L GY+ + K +L+R+ ++ + +E F+K
Sbjct: 304 LNKGAFPVILQTFKEALLHLDGYINENGKINLKRLGVWLNYLSQFELMNFEK 355
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 140/279 (50%), Gaps = 16/279 (5%)
Query: 493 GAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNP-EEDKVKLGEPGWKERYY 551
A +VE + + + + F+A +E +DK + F S+ E+++K E
Sbjct: 493 NAILVEDKEELDNEQEIYDARFEAWKREYYQDKFNLFGSEKVVTEEEIKFDENDDTTNNT 552
Query: 552 EEKFNAKTPE-EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-KD 609
E K + EE ++ Y EGL WV++YYY G SW W+Y HYAP SDL K
Sbjct: 553 EIKRTVEYVNINSEEDVAEIARNYVEGLQWVLYYYYRGCPSWSWYYKGHYAPRISDLAKG 612
Query: 610 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
LDQ FE HPF PF QL+ V P S + +P R LM D SPI DFYP + ++D N
Sbjct: 613 LDQ-TFVFEKRHPFTPFQQLMAVLPERSKNLIPAVLRPLMFDEKSPILDFYPNEVQLDKN 671
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV-------LLSHP 722
GK W+ + L F+DE RL+ ++ LT EE RNS D+ F + P
Sbjct: 672 GKSADWEAVVLLSFVDEDRLVTAMQPYLEKLTPEEKERNSFGIDLTFRFNPQVDEVYKSP 731
Query: 723 LSASIYTLD-EHCKQLKIK-ERV---EVKERLNPELSDG 756
L+ + HC ++K + E++ E++ L PE DG
Sbjct: 732 LNGVFSDIKHNHCMEIKFEMEKLDLHEIRYGLLPEAKDG 770
>gi|449278569|gb|EMC86380.1| 5'-3' exoribonuclease 1, partial [Columba livia]
Length = 1710
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 220/363 (60%), Gaps = 43/363 (11%)
Query: 47 EYDNLYLDMNGIIHPCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDG 104
E+DNLYLDMNGIIH C HP D + D++F +F Y++ LF +++PRK+ +MA+DG
Sbjct: 3 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 62
Query: 105 VAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGT 164
VAPRAKMNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGT
Sbjct: 63 VAPRAKMNQQRGRRFRSAKEA------EDKIKKALEK-GETLPTEAR---FDSNCITPGT 112
Query: 165 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 224
EFMA L L+Y+++++++ D W+ + V LS PGEGEHKIM ++R ++ P +DPN
Sbjct: 113 EFMARLHEHLKYFVNMKISTDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPN 172
Query: 225 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 284
TRHCLYGLDADLIML L +HE HF++LRE V GK ++
Sbjct: 173 TRHCLYGLDADLIMLGLTSHEAHFALLREEV--------------------RFGGKKSQR 212
Query: 285 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFF 342
A +E + LH+ +REY+DYEF FE D+E I+DD+I M F
Sbjct: 213 ACAPEETT---------FHLLHLSLMREYIDYEFSPVKDKISFEYDIERIIDDWILMGFL 263
Query: 343 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYED 402
VGNDF+PH+P L I A+ LL Y LGGY+ + +L+R E ++ + ++
Sbjct: 264 VGNDFIPHLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLKRFEKYLTKLSDFDR 323
Query: 403 RIF 405
F
Sbjct: 324 EHF 326
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 532 DNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVC 590
D PE+D + E +K YY K + + + D Y + + W++HYYY GV
Sbjct: 391 DEPEDDDLFETEFRQYKRTYYMTKMGVEVVSD--DFLADQAECYVQAIQWILHYYYHGVQ 448
Query: 591 SWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP+ Y+ LM
Sbjct: 449 SWSWYYPYHYAPYLSDIRNIGELKIKFELGKPFMPFEQLLAVLPAASKDLLPKCYQHLMI 508
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
+SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE RRN+
Sbjct: 509 SQDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNKCLKEEEKRRNTH 568
Query: 711 MADMLF 716
A +++
Sbjct: 569 SACLMY 574
>gi|224587591|gb|ACN58687.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 713
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 285/553 (51%), Gaps = 52/553 (9%)
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+I+RE F P Q C +CGQ GH +C+G A+ K GE DE D + ++
Sbjct: 1 LATHEPNFTIIREE-FKPNQPRPCAMCGQKGHELKDCQGVAREKQGEHDEFADAMPASEQ 59
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+ F+ + LREYL+ E + + PF D E VDD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 60 EFIFIRLCVLREYLERELTMASLPFPFDFERTVDDWVFMCFFVGNDFLPHLPSLEIREGA 119
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
I+ L+ +YK GGY+T+ L VE +QA+G ED IF+KR + R K
Sbjct: 120 IDRLVGIYKDVVHKTGGYITENGFVKLESVELIMQAIGVAEDNIFKKRKEDDEGFKRRNK 179
Query: 421 REKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRP 480
+K + + Q S + +F L P Q + +G
Sbjct: 180 EKKKRM------KAQQQGPSFLTSGQFAPQALGGRGRPEVVQNARHQAFDMRMQGRD--Q 231
Query: 481 HKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKV 539
H S G +AE+S E DP++N ++ K+ R F+ D ++D
Sbjct: 232 HNRAGTSDGQDGRGVKRKAEDSDSEPDPEDNVRLWEDGWKQ--RYYKTKFDVDATDDD-- 287
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
F K E V+ Y +G C +Y +P+H
Sbjct: 288 ---------------FRKKVVMSYVEGLCWVLRYYYQG-CASWKWY----------FPFH 321
Query: 600 YAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
YAPFASD KD+ FELG PFKP QL+GVFP+AS + LPE +R LM++P S I D
Sbjct: 322 YAPFASDFKDIKGMFTDFELGTKPFKPLEQLMGVFPAASGNFLPETWRSLMSNPESSIID 381
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
FYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ L+ EE +RNS+ +DMLFV
Sbjct: 382 FYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPNLSPEENKRNSLGSDMLFVG 441
Query: 719 LSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPP--VFRSP 776
SH + I ++L E E E + EL G+ G ++ GDP P SP
Sbjct: 442 KSHSICDFI-------QELYRGESHEGTE-MPAELCHGIQGTLN-LDGDPILPDKPVESP 492
Query: 777 VASMEDIMGNQVL 789
+ + DI N +
Sbjct: 493 IPMLRDIAQNSAI 505
>gi|326327749|pdb|2Y35|A Chain A, Crystal Structure Of Xrn1-Substrate Complex
Length = 1140
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 234/412 (56%), Gaps = 64/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREHC-------IP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P++L ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +++A A+ + R E R FDSN ITPGTEFM L L+ ++
Sbjct: 102 FRTAREAEQQEAKAAQ-RGELREHER----------FDSNCITPGTEFMVRLQEGLRAFL 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ DP W++ VILS PGEGEHKIM Y+R + P YDPNTRHCLYGLDA LI+
Sbjct: 151 KTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDAALII 210
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE+HF +LRE V +F V
Sbjct: 211 LGLCTHELHFVVLREEV-------------------------------KFGRNVKRTSVE 239
Query: 299 KKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+PH+P L I
Sbjct: 240 ETRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHIS 299
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
A+ LL Y + LGG + + K +LRR++ FI A+ E F++ A
Sbjct: 300 SNALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHA 351
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K +Y KF + +E +++ Y L WV+ YYY GV SW W+YP+HY PF
Sbjct: 413 NYKRNFYRNKFKR---DPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFI 469
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SDLK+++Q I+F +G PF PF QLL V P+AS+ LP Y LM P SP+++FYP +F
Sbjct: 470 SDLKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEF 529
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
E D+NGK++ W+ + +PFIDE RLL + E L+ EE RN
Sbjct: 530 ESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERERN 573
>gi|298713577|emb|CBJ27105.1| dhm exonuclease [Ectocarpus siliculosus]
Length = 709
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 169/416 (40%), Positives = 241/416 (57%), Gaps = 59/416 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P +RWL ++YP V++ +++ G+ N + DNLYLDMNG+IH
Sbjct: 131 MGIPKLFRWLTDQYP-VISQRLDQ------GL---------NEHTAPIDNLYLDMNGVIH 174
Query: 61 PC-FHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H +D E+F+ +F + DR+F +VRPR+LLY+A+DG APRAKMNQQRSRRF
Sbjct: 175 MCTHHNDDEFIELNEKEMFRRIFIFTDRMFKLVRPRRLLYLAVDGTAPRAKMNQQRSRRF 234
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R+SK+A + AE R+G KLP + FDSN ITPGT+FM L+ A Q +I
Sbjct: 235 RSSKEAEVNMAE------MVMRDG-KLP---EVTRFDSNCITPGTDFMFKLTKAFQAWIE 284
Query: 180 LRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNL-PGYDPNTRHCLYGLDADLI 237
+++ DP W++ +V+ S +VPGEGEHK+M Y+R R P + + RHCLYGLDADLI
Sbjct: 285 YKMDTDPFWQQNARVVFSGPDVPGEGEHKVMDYIREARETEPDWRDDLRHCLYGLDADLI 344
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML+L THE HFS+LRE K + + D +
Sbjct: 345 MLSLVTHEKHFSLLRE--------------------------KMSVRHSRRKKPKDPITY 378
Query: 298 PKKPYQFLHIWTLREYLDYEFRI----PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ ++ + + LRE L +F+ P PF+ +LE ++DDF+FMC VGNDFLP++P
Sbjct: 379 TRNDFELMEVSLLREMLRLQFQSQANDPKLPFKFELERVIDDFVFMCILVGNDFLPNVPH 438
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
L+I +GA+N +M +YK +GGYLT + R+E F+ V E F++R
Sbjct: 439 LDISDGALNHMMNMYKLLLPKMGGYLTKKDQIHHGRLEMFMHEVSRREAMYFRRRG 494
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 116/194 (59%), Gaps = 6/194 (3%)
Query: 518 LKELLRDKSDAFNSDNPEEDKVKLGEPG-WKERYYEEKFNAKTPEEREETRKDVVLRYTE 576
+ E+ R ++ F EE + L +PG + +RYY+ K + PE+ EE R VV Y E
Sbjct: 479 MHEVSRREAMYFRRRGVEESDLVLQDPGKYTDRYYKTKLDLD-PEQEEEKRA-VVKHYLE 536
Query: 577 GLCWVMHYYYEGV---CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
GL WV+ YY+ GV SW W+YP+ YAP AS +K+L +ISFE G PF QLL V
Sbjct: 537 GLYWVLKYYHVGVDAGGSWSWYYPHLYAPLASSMKNLMDIDISFEKGRPFPNLLQLLSVL 596
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P S+ LPE Y+ LM +P SPI ++YPT+FE D NGK SW+ + K+PFIDE + +
Sbjct: 597 PPQSADFLPEPYKALMVEPTSPILEYYPTEFECDANGKTASWETVVKIPFIDEKDVFGAL 656
Query: 694 KKIEHTLTEEEARR 707
++HT E R
Sbjct: 657 SNVDHTKDLEAVDR 670
>gi|395528095|ref|XP_003766167.1| PREDICTED: 5'-3' exoribonuclease 1 [Sarcophilus harrisii]
Length = 1695
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 219/364 (60%), Gaps = 45/364 (12%)
Query: 47 EYDNLYLDMNGIIHPCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDG 104
E+DNLYLDMNGIIH C HP D + D++F +F Y++ LF +++PRK+ +MA+DG
Sbjct: 13 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 72
Query: 105 VAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGT 164
VAPRAKMNQQR RRFRA+K+A E+++++ E+ G LP ++ FDSN ITPGT
Sbjct: 73 VAPRAKMNQQRGRRFRAAKEA------EDKIKKALEK-GEILPTEAR---FDSNCITPGT 122
Query: 165 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 224
EFMA L L+Y++++++++D W+ + + LS PGEGEHKIM ++R ++ P +DPN
Sbjct: 123 EFMARLHEHLKYFVNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPN 182
Query: 225 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 284
RHCLYGLDADLIML L +HE HFS+LRE V G+
Sbjct: 183 IRHCLYGLDADLIMLGLTSHESHFSLLREEVRFGGK------------------------ 218
Query: 285 AGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCF 341
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F
Sbjct: 219 ------KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGF 272
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
VGNDF+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 273 LVGNDFIPHLPHLHINHDALPLLYRTYMTVLPELGGYINENGHLNLPRFEKYLIKLSDFD 332
Query: 402 DRIF 405
F
Sbjct: 333 REHF 336
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 111/184 (60%), Gaps = 3/184 (1%)
Query: 526 SDAFNSDNPEEDKVKLGE-PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
S + D PE+D + E +K YY K + + + D Y + + W++HY
Sbjct: 396 SKSVVEDEPEDDDLFETEFRQYKRTYYMTKMGVEIVSD--DFLADQAECYVQAIQWILHY 453
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEH 644
YY GV SW W+YPYHYAP+ SD++++ + I FELG PF PF QLL V P+AS LP
Sbjct: 454 YYHGVQSWSWYYPYHYAPYLSDIRNISELKIQFELGKPFMPFEQLLAVLPAASKDLLPGC 513
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL ++ L EEE
Sbjct: 514 YQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCNKYLKEEE 573
Query: 705 ARRN 708
+RN
Sbjct: 574 KKRN 577
>gi|328709686|ref|XP_003244039.1| PREDICTED: 5'-3' exoribonuclease 1-like [Acyrthosiphon pisum]
Length = 509
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/372 (44%), Positives = 220/372 (59%), Gaps = 63/372 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP + ++ +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYMSERYPCLSE--------LVKDYQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T + + + +F Y++ LF M++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDDDPHFRITEETIVKNIFHYLEVLFQMIQPQKLFFMAIDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++ AA+ E G LP + + FDSN ITPGT FM L L+Y++
Sbjct: 102 FRSAHTAAEQTKEAIS-------RGETLPSE---ERFDSNCITPGTPFMVRLQSELEYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++NDP W K++VILS VPGEGEHKIM Y+R ++ PGY+P+TRHCLYGLDADLIM
Sbjct: 152 ADKMSNDPLWTKVQVILSGHQVPGEGEHKIMDYIRYMKSRPGYNPHTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE +FS+LRE E K RK + E V
Sbjct: 212 LGLCTHEPYFSLLRE------------------------EVKFGRKTKK------ETSVD 241
Query: 299 KKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ +R+YL EF+ PFE DLE I+DD++ M F VGNDF+PH+P L I
Sbjct: 242 ETQFYLLHLSLMRDYLGLEFQELKETLPFEYDLESIIDDWVLMGFLVGNDFIPHLPDLHI 301
Query: 357 REGAINLLMAVY 368
+GA+ +L VY
Sbjct: 302 SKGALPILYRVY 313
>gi|392350257|ref|XP_003750606.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Rattus
norvegicus]
Length = 453
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 219/366 (59%), Gaps = 45/366 (12%)
Query: 47 EYDNLYLDMNGIIHPCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDG 104
E+DNLYLDMNGIIH C HP D + D++F +F Y++ LF +++PRK+ +MA+DG
Sbjct: 3 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 62
Query: 105 VAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGT 164
VAPRAKMNQQR RRFR++K+A E+++++ E+ G LP ++ FDSN ITPGT
Sbjct: 63 VAPRAKMNQQRGRRFRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGT 112
Query: 165 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 224
EFMA L L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPN
Sbjct: 113 EFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPN 172
Query: 225 TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 284
TRHCLYGLDADLIML L +HE HFS+LRE V G+
Sbjct: 173 TRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGK------------------------ 208
Query: 285 AGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCF 341
K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F
Sbjct: 209 ------KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGF 262
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
VGNDF+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 263 LVGNDFIPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFD 322
Query: 402 DRIFQK 407
F +
Sbjct: 323 REHFSE 328
>gi|157119783|ref|XP_001659504.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108875157|gb|EAT39382.1| AAEL008814-PA [Aedes aegypti]
Length = 1668
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 237/409 (57%), Gaps = 63/409 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++I E ++P ++DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-CLSELIREN-------QVP-----------DFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +++F +F Y++ LF M+RP+KL ++A+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDSDVFFRITEEKIFSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++++A + A E ++ + E R FDSN ITPGT FM L AL+++I
Sbjct: 102 FRSAREAQEQAEEAQKKGEVLPTEAR----------FDSNCITPGTSFMVRLQKALEHFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++++ +P W+ KVILS PGEGEHKIM Y+R ++ P +D NTRHCLYGLDADL+M
Sbjct: 152 KVKVSTNPLWKHCKVILSGHETPGEGEHKIMEYIRYAKSQPDFDSNTRHCLYGLDADLVM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE HFS+LRE V K G+ D+K +V
Sbjct: 212 LGLCTHEKHFSLLREEV----------------------------KFGKNDKKSS--IVE 241
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ +REYL+ EF FE ++ ++DD++ M + VGNDF+PH+P L I
Sbjct: 242 ETRFYLLHLTLMREYLELEFAPVRDKLKFEFNIYKLIDDWVLMGYMVGNDFIPHLPHLHI 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
E A+ L Y L GY+ +G ++ R+E + + ++ IF
Sbjct: 302 NENALPTLFQAYMDILPTLDGYINEGGILNMPRLEVLMNRLARFDRDIF 350
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 146/266 (54%), Gaps = 16/266 (6%)
Query: 513 EFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT----------PEE 562
E L L++ D F+ D E+D G+ ++E++F A +
Sbjct: 384 EMDCDLSALIKASEDMFSDD--EDDAEPPGDIENDPEFFEKEFTAYKRNYYITKLGYQDY 441
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP 622
+ TR + Y L W + YYY GV SW W+YP+HYAPF SDL+++ ++FE G P
Sbjct: 442 NQATRDEQTECYIRALQWTLLYYYRGVPSWAWYYPHHYAPFISDLQNISSLKLNFEPGKP 501
Query: 623 FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLP 682
F PF QLL V P+AS LP Y KLMTDPNSP+ D+YP +FE D+NGK+ +W+ + +P
Sbjct: 502 FLPFQQLLSVLPTASKDHLPSAYHKLMTDPNSPVVDYYPENFETDLNGKQQAWEAVVLIP 561
Query: 683 FIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA--SIYTLDEHCKQLKIK 740
FIDE RLL ++ + LT+EE +RN ++F S + Y +E +QLK+K
Sbjct: 562 FIDEKRLLKAMEPCDAFLTDEEKQRNVHGPMLVFQYDSKGTKQLPACYGFEE-IEQLKVK 620
Query: 741 ERVEVKERLNPELSDGMNGYISPCAG 766
E +++++ +L G + P G
Sbjct: 621 ESAIYRDQVSCDLV-GNKLVLGPSKG 645
>gi|307180136|gb|EFN68180.1| 5'-3' exoribonuclease 1 [Camponotus floridanus]
Length = 1644
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/436 (38%), Positives = 242/436 (55%), Gaps = 69/436 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP +++VI+E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-CLSEVIKEH-------QIP-----------EFDYLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE-VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C HP D +E +F+ +F YI+ LF M+RP+KL +MAIDGVAPRAK+NQQR RRF
Sbjct: 42 TCSHPNDDVCFRISEEDIFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+KDA A+ + E +E R FDSN ITPGT FMA L L+ ++
Sbjct: 102 RAAKDAEVQEAKAKAKGLEIPKEKR----------FDSNCITPGTLFMAKLGEQLKLFVE 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+++ D W+K K++ S + VPGEGEHKIM Y+R + Y+ N+RHCLYGLDADLIML
Sbjct: 152 YKVSMDDTWKKCKILFSGSEVPGEGEHKIMDYIRYMKASKDYNCNSRHCLYGLDADLIML 211
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L +HE +FS+LRE V +F ++ ++ +
Sbjct: 212 GLCSHEPNFSLLREEV-------------------------------KFGKQQVKMTPEE 240
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ LH+ LREY+++EF F D+E I+DD++ M F VGNDF+PH+P L I
Sbjct: 241 TKFCLLHLSLLREYIEHEFSPIKDKLLFPFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIA 300
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAE 417
GA+ +L Y + L GY+ + L R E F++ + + F ++ +A+
Sbjct: 301 NGALPILYRAYMEVLPTLDGYINEAGTLKLDRFEKFMENLSHLDLEQF------NEHYAD 354
Query: 418 RIKREKAQARRGDDVE 433
E RR ++ E
Sbjct: 355 LKYFESKTGRRPNETE 370
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 118/219 (53%), Gaps = 9/219 (4%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
K YY K K + E + Y + W + YYY G CSW W+YP+HYAP+ SD
Sbjct: 442 KRDYYMNKLEYKNVDA--EVLRSQAEGYVRAIQWNLGYYYHGCCSWSWYYPHHYAPYISD 499
Query: 607 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 666
+KD + FELG PF PF QLL V P+ S LP ++ L+T+ +SPI ++YP DF+
Sbjct: 500 IKDFKDLKLEFELGEPFLPFQQLLAVLPAYSKDLLPMAFQTLLTEESSPIINYYPHDFKT 559
Query: 667 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL---LSHPL 723
D+NGK+ W+ + +PFIDE L+ ++ LT +E RN L++ +
Sbjct: 560 DLNGKKQEWEAVVLIPFIDEKLLVAAMQPHLSKLTADEDARNRHGPMCLYMYSDEIRSTQ 619
Query: 724 SASIYTLD-EHCKQLKIKERVEV---KERLNPELSDGMN 758
A+IY + +C QL R E+ +E+L LS G N
Sbjct: 620 KATIYFPEFTNCAQLTSINRDEIFVPREQLIRGLSPGFN 658
>gi|194762996|ref|XP_001963620.1| GF20490 [Drosophila ananassae]
gi|190629279|gb|EDV44696.1| GF20490 [Drosophila ananassae]
Length = 1605
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/414 (40%), Positives = 242/414 (58%), Gaps = 68/414 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------SIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P++L ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDSNIHFHLEEAQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
FR+S++A +S A + R+E ER FDSN ITPGTEFM L + L+
Sbjct: 102 FRSSREAEQMESKALQRGERREHER-------------FDSNCITPGTEFMQRLQVRLRA 148
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ +++ DP W++ VILS PGEGEHKIM Y+R + P +DPNTRHCLYGLDADL
Sbjct: 149 FLQTKISTDPLWQRCSVILSGQETPGEGEHKIMDYIRFMKAQPDFDPNTRHCLYGLDADL 208
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L THE+HF +LRE V +F
Sbjct: 209 IILGLCTHELHFVVLREEV-------------------------------KFGRNVKRTS 237
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
V + + LH+ LREYL+ EF N ++D+ ++DD++ M F VGNDF+PH+P L
Sbjct: 238 VEETRFFLLHLGLLREYLELEFDDLNTDEHKLDVAQLIDDWVLMGFMVGNDFIPHLPCLH 297
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
I A+ LL + Y K + LGG + + K +L+R++ F+ A+ E F++ A
Sbjct: 298 ISSNALPLLYSTYIKIYPKLGGNINENGKLNLQRLQVFLTALTEVELEQFKEHA 351
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 10/214 (4%)
Query: 502 SFETDPQE--NKEEFKAKLKELLRDKSDAFNSDNPE----EDKVKLGE-PGWKERYYEEK 554
+F+ D E E + + L L+ + + D+ E E + E +K YY K
Sbjct: 363 AFDVDVSEITGTESYDSDLAALIDNSMKLYEGDSDEDLCDEAASLMHEFQNYKRNYYCTK 422
Query: 555 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 614
F + +P++ E ++ Y L W++ YYY GV SW W+YP+HYAPF SD++++++
Sbjct: 423 FKSDSPDQLIE---ELSYHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDIRNVEKVK 479
Query: 615 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
++F LG PF PF QLL V PSAS +P + LM +P SP+++F+P DFE D+NGK++
Sbjct: 480 VNFHLGEPFFPFQQLLAVLPSASFKLMPTAFHDLMLNPESPLAEFFPVDFESDLNGKKHD 539
Query: 675 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
W+ + +PFIDE RLL+ + E L+E E RN
Sbjct: 540 WEAVVLIPFIDEKRLLNAMVPCELRLSEAEKERN 573
>gi|167521441|ref|XP_001745059.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776673|gb|EDQ90292.1| predicted protein [Monosiga brevicollis MX1]
Length = 235
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 141/257 (54%), Positives = 181/257 (70%), Gaps = 26/257 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+ WLA++YP +V + E ++PNP GLE+DNLYLDMNGIIH
Sbjct: 1 MGVPQFFAWLAQRYPSIVTVLRE---------------TRPNPLGLEFDNLYLDMNGIIH 45
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP+P + E+ +F YIDRLF ++RPR+L++MA+DGVAPRAKMNQQR+RRFR
Sbjct: 46 PCCHPEDRPSPKSEAEMMLAIFTYIDRLFRVIRPRRLVFMAVDGVAPRAKMNQQRARRFR 105
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPP----KSDSQVFDSNVITPGTEFMAVLSIALQY 176
A+++ ++ RQ+ + G L + + FDSN ITPGTEFM+ LS ALQ+
Sbjct: 106 AAQEGREA-------RQDLQASGDNLSAFRQRRKERMPFDSNCITPGTEFMSRLSAALQH 158
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
Y+ LRL+ DPGW ++VI SDA+VPGEGEHKI+ ++R RN P YDPN RH LYG DADL
Sbjct: 159 YVVLRLSEDPGWANLQVIFSDASVPGEGEHKILDFIRNARNGPNYDPNQRHVLYGADADL 218
Query: 237 IMLALATHEVHFSILRE 253
I+L LATHE +LRE
Sbjct: 219 ILLGLATHEPAIYVLRE 235
>gi|389582934|dbj|GAB65670.1| exoribonuclease [Plasmodium cynomolgi strain B]
Length = 1327
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 262/489 (53%), Gaps = 75/489 (15%)
Query: 1 MGVPAFYRWLAEKYPLVV--------ADVIEEEPVVIDG----------VKIP-----VD 37
MGVP FYRWL +YP + +DV + DG ++P V+
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIRDGHHNGEKKKDTYRVPDLSDYVN 60
Query: 38 TS-----KPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMV 92
+ N NG YDNLYLDMNGIIH C H ++ + +E+F +F YI+RLF ++
Sbjct: 61 NTDENHCSDNINGY-YDNLYLDMNGIIHLCSHSDNSRRAKSNEEIFLNIFLYIERLFDII 119
Query: 93 RPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS 152
P+KLLYMAIDGVAP+AKMNQQRSRRF++ + LR++F E R +P +
Sbjct: 120 EPKKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERNAYIELREKFLSENRTVP--EEL 177
Query: 153 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 212
+DSN+ITPGT+FM LS+AL+Y++ ++ ND W+ I VI SDAN
Sbjct: 178 TFWDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDAN------------- 224
Query: 213 RLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQ-----QDKCFL- 266
R+ PGYDPNTRH ++G+DADLIML+LA+HE +F ILRE++ + Q+K F+
Sbjct: 225 ---RSQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQNKDFVG 281
Query: 267 ---CGQPGHLAANCEGKAKRKAGEFDE-------KGDEVVVPKKPY---QFLHIWTLREY 313
Q L K K+ ++++ + ++ + + Q L + LREY
Sbjct: 282 VLKSKQDLPLCTTHIRKTKKMYTKYNDPHYANINRSHNCMINSENWNELQILDLTILREY 341
Query: 314 LDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFR 373
L +F + +LE +DDFIF+CF GNDFLPH+P++ I G+I+ L+ +Y+K
Sbjct: 342 LSKDFFFDST---YNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQKVLP 398
Query: 374 ALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI------FQKRARLHQRHAERIKREKAQAR 427
LG YL + K +L+ ++ + E F+K+ + + +KR K
Sbjct: 399 VLGDYLINEGKINLKPFSKYVSFIAEVERETFISQYDFKKKREKRDQQKDSLKRVKCTDE 458
Query: 428 RGDDVEPLA 436
+ D +A
Sbjct: 459 QNDGSGNIA 467
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 135/228 (59%), Gaps = 9/228 (3%)
Query: 504 ETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKE----RYYEEKFNAKT 559
ET + EF LKE ++ ++ +NP+ED V+LG E +YY+ KF+
Sbjct: 656 ETKRINDINEFNMLLKEAIKKANEC---ENPKED-VELGGDENPELIRIKYYKSKFHLDE 711
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFEL 619
+ ++ K+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL +D N F
Sbjct: 712 SDHVDDFVKEVVYKYIEGLSWVLLYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVNFIFHK 770
Query: 620 GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIA 679
P P QLL V PS SSH LP+ Y++LM +SPI DFYP F+ + NGK+Y +Q +
Sbjct: 771 DEPILPLEQLLCVLPSNSSHCLPKSYQELMVRYDSPIIDFYPKTFKEEENGKKYKYQWVI 830
Query: 680 KLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
LPF+D+ R++ +++ TLTEEE +RN + +++ SH LS I
Sbjct: 831 LLPFVDKERIIKHARELNDTLTEEERKRNRRGMNKIYMNCSHSLSKQI 878
>gi|340054861|emb|CCC49169.1| putative 5'-3' exonuclease XRNA [Trypanosoma vivax Y486]
Length = 1411
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/433 (39%), Positives = 236/433 (54%), Gaps = 60/433 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW+AE+YP V+ IP P + DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERYPSVI---------------IPFRDFPP-----QIDNLYLDMNGIIH 40
Query: 61 PCFHPED----RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C HP D APT E+ + MF Y+++LF ++PRK ++A+DGVAPRAKMNQQR
Sbjct: 41 NCSHPNDVDAKHKAPTEL-EMAKSMFVYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQRQ 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR+R S E R+E G ++P + D VFDSN ITPGT+FM +S QY
Sbjct: 100 RRYR-------SGYELMIAREEALARGEEIPEEHD--VFDSNCITPGTDFMVRISEHFQY 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I ++++ DP W+K +I S + PGEGEHKI+ ++R + PGY PN HC+YGLDADL
Sbjct: 151 FITMKVSTDPAWQKCNIIYSGHDHPGEGEHKIVDFIRRNKMQPGYSPNESHCMYGLDADL 210
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
+MLALATHE +F +LREVV + E + R+ E D K + V
Sbjct: 211 VMLALATHEPNFVLLREVVSF-----------------GSSESRRLREQKEAD-KANGFV 252
Query: 297 VPKK---PYQFLHIWTLREYLDYEFRI-----PNPPFEIDLECIVDDFIFMCFFVGNDFL 348
V K P +F+ + + P D E +VDDF+ MCFFVGNDFL
Sbjct: 253 VDKSYHVPDEFVLFHLNLLRDYLDLDLRDKVGAGLPVSYDFERVVDDFVLMCFFVGNDFL 312
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
P +PTL I +G++ ++ +Y YLT+ + + R VE +IQ + E + R
Sbjct: 313 PSIPTLSINDGSLVHMLDIYASRVLKANMYLTEEGRINWRTVELWIQGLAELEFSTIKAR 372
Query: 409 ARLHQRHAERIKR 421
+ + ++ R
Sbjct: 373 EAKEKEYQRQLAR 385
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
Query: 546 WKERYYEEKF---NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
+K+++Y EK N P+ +E D+ L Y EGL WV YYY G SW+WF+P+HYAP
Sbjct: 406 YKDQFYREKHGFDNGWDPQGKEIA--DLRLHYVEGLVWVYGYYYHGPPSWKWFFPHHYAP 463
Query: 603 FASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
SDL +L +SFE+G PF P QLL V P S LP Y L+ SP++ ++
Sbjct: 464 MVSDLVNLPAVANRVSFEVGEPFLPHQQLLAVLPPMSYRLLPRAYWPLLRSKGSPLARYF 523
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
P ++D G R SW+GI +PFIDE LL ++ +T E+ N + LF
Sbjct: 524 PEQLKIDREGARASWEGIVLIPFIDERTLLAAFSSVQDRVTPEDRANNRLGKPTLFT 580
>gi|160331478|ref|XP_001712446.1| dhm [Hemiselmis andersenii]
gi|159765894|gb|ABW98121.1| dhm [Hemiselmis andersenii]
Length = 553
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 171/408 (41%), Positives = 230/408 (56%), Gaps = 54/408 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YPL+ ++E E+D YLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPLINQRLVENS---------------------EFDCFYLDMNGIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C E + T +E+FQ +F Y D LF +VRPRKL+Y+AIDGVAPRAKMNQQRSRRFR
Sbjct: 40 NCSQKEQKDNIQTEEELFQKIFSYTDHLFRIVRPRKLIYLAIDGVAPRAKMNQQRSRRFR 99
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ K E E+++ E KL K++ FDSN ITPGTEFM LS + + ++
Sbjct: 100 SVK-------ELEKIKTVVN-ETSKL-SKNEISFFDSNCITPGTEFMKNLSFSFKKWLEN 150
Query: 181 RLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVR-LQRNLPGYDPNTRHCLYGLDADLIM 238
++ DP W++ VI S + VPGEGEHKIM+Y+R +Q+ RHCLYGLDADLIM
Sbjct: 151 KIKFDPEWQQGCDVIFSGSEVPGEGEHKIMNYIRKIQKFNQNKSKTLRHCLYGLDADLIM 210
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L HE F++LRE + G Q +P + K + AG+
Sbjct: 211 LGLVAHENQFTLLREKLIWKGTQQNI----KP----IDSLKKKNQPAGD----------- 251
Query: 299 KKPYQFLHIWTLREYLDYEFR-IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ L I LR+ L EF+ + F ++E IVDDFIFMC +GNDFLP +P L I
Sbjct: 252 --EFHLLEISLLRDMLYLEFKPKESWRFTFNIERIVDDFIFMCMLIGNDFLPSLPHLSIA 309
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
G +NLL+ YK+ + GYLT + + RVE F++ + + + F
Sbjct: 310 SGGLNLLVRSYKEIQKDSKGYLTKKYQMHMGRVELFLEKISNEAEEFF 357
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 109/176 (61%), Gaps = 3/176 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+KE YY K N +++ R + + Y +GL W ++YY++G SW WFYP +YAP
Sbjct: 374 YKESYYSSKLNLDYSSGKDKKRLEKLKSDYIQGLNWCLYYYHKGCPSWNWFYPEYYAPLT 433
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SDLKDL + I F G PF+P QLL V P SS LP + LMTD +SPI +FYP +F
Sbjct: 434 SDLKDLKKIKIKFTKGRPFEPLIQLLSVLPPKSSIFLPLTFANLMTDKDSPILNFYPNNF 493
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEEARRNSIMADMLFVL 718
++D+NGK+ W+G+ LPFID+ +L+D V + +L +EE RN D++F L
Sbjct: 494 KLDLNGKKNLWEGVVLLPFIDQKKLIDTVNIYGRKESLCKEEKIRNCFGKDVVFFL 549
>gi|326429495|gb|EGD75065.1| hypothetical protein PTSG_06722 [Salpingoeca sp. ATCC 50818]
Length = 1402
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/408 (39%), Positives = 231/408 (56%), Gaps = 59/408 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P +YRW++E+YP + V E E +P ++DNLYLDMNGIIH
Sbjct: 1 MGIPKYYRWISERYPCLSQVVRESE--------VP-----------DFDNLYLDMNGIIH 41
Query: 61 PCFHP-EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C HP +D T +++F+ + YI+ LF ++RP+++ YMAIDG APRAKMNQQR+RRF
Sbjct: 42 TCSHPSDDVNFRLTEEKMFEDICAYIETLFRIIRPQRVFYMAIDGCAPRAKMNQQRARRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R++K+A E RQ+ EREG+ L FDSN ITPGT FM L L+Y++
Sbjct: 102 RSAKEA-------EEARQKAEREGKLLDDPDAPPPFDSNCITPGTPFMHRLHQHLEYFVQ 154
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++ +DP W+ ++V+LS VPGEGEHKIM ++R ++ YD NTRHCLYGLDADLI+L
Sbjct: 155 AKITSDPAWQGLRVVLSGHQVPGEGEHKIMDFIRSEKLRDDYDANTRHCLYGLDADLIIL 214
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L +HE HFS+LRE E + R+ + D V
Sbjct: 215 GLVSHEPHFSLLRE------------------------EVRFGRRQKSKKDSQDNV---- 246
Query: 300 KPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ L + REYL EF P F D E ++DD++ + F +GNDF+PH+P I
Sbjct: 247 --FHLLSLSLYREYLRMEFFDVKPLLSFPFDFERLLDDWVLLGFLIGNDFIPHLPHFHIS 304
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
+ + L + YK + L G++TDG ++ R++ ++ + + F
Sbjct: 305 QDIVPTLYSSYKLALQKLDGWITDGGTINMARLQVLLEELSIIDRNAF 352
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K YY EK + ++ E R Y GL W++ YYY+GV SW WF+P HYAPF S
Sbjct: 463 YKANYYLEKLGVQRYDD--EFRLSQAQEYVRGLQWILFYYYKGVPSWSWFFPSHYAPFVS 520
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++ ++ F FELG PF PF QL+ V P AS +P Y+ LM D SPI DFYP F+
Sbjct: 521 DIRAIEDFKPEFELGEPFSPFEQLMSVLPPASRDHVPPAYQPLMLDSQSPIIDFYPQTFK 580
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSA 725
D+NGKR +W+ + +PFID+ RLL V + H LT+ E RN FV H SA
Sbjct: 581 TDLNGKRNAWEAVVLIPFIDQDRLLSAVHSLSHLLTDAEKNRNKHSLAKCFV---HSASA 637
Query: 726 SIYTLDEH 733
+ H
Sbjct: 638 RLRVASPH 645
>gi|260944866|ref|XP_002616731.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
gi|238850380|gb|EEQ39844.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
Length = 327
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/320 (51%), Positives = 219/320 (68%), Gaps = 18/320 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RW++ KYP +++ V+E+ G ++P S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPAFFRWISRKYPKIISPVVEDVGDPQFG-RVP-QYSDPNPNG-ELDNLYLDMNGIVH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE +PAP T DE+F +F Y +R+ +M RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 58 PCSHPEHKPAPETEDEMFLDVFKYTERVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 117
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
A++DA +A E+ER +EFE G+ + + +D+N ITPGT FM L++AL+Y++
Sbjct: 118 AAQDARAAAEEKERQIREFEARGQAIDDAIKGKKSWDTNAITPGTPFMDGLALALRYWVA 177
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+L +DPGW ++VI+SDA VPGEGEHK+MS++R QR P YD NTRHC+YGLDADLI L
Sbjct: 178 HKLASDPGWRDLQVIVSDATVPGEGEHKLMSFIRSQRADPQYDANTRHCIYGLDADLIFL 237
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
LATHE HF +LRE VF G + + Q + A++ A K
Sbjct: 238 GLATHEPHFRVLREDVFAQG-NGRMRVADQLQITQDQRDAIAEQDA-------------K 283
Query: 300 KPYQFLHIWTLREYLDYEFR 319
KP+ +LH+ LREYL+ E R
Sbjct: 284 KPFLWLHVNVLREYLEVELR 303
>gi|7509723|pir||T26774 hypothetical protein Y39G8C.b - Caenorhabditis elegans
Length = 1801
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/526 (36%), Positives = 267/526 (50%), Gaps = 56/526 (10%)
Query: 200 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFT- 257
VPGEGEHKIM ++R +R YDPNTRHC+YGLDADLIML + +HE HFS+LRE V F
Sbjct: 269 VPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNT 328
Query: 258 -PGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDY 316
P + D KA +K D K + LH+ LREYL +
Sbjct: 329 RPRKND----------------NKATKKPKRTDSD-------VKKFHLLHLSLLREYLAW 365
Query: 317 EFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRA 374
EF + PFE ++E IVDD+I + VGNDFLPH+P + I + A+ LL + YKK
Sbjct: 366 EFADVKDSLPFEYEMERIVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPT 425
Query: 375 LGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREK-AQARRGDDVE 433
L GY+ + +L R E F+ + + F ER++ E+ +++R V+
Sbjct: 426 LDGYINEAGYLNLSRFEAFLAELALNDKTSFM----------ERLEDEQFMESKRIRVVD 475
Query: 434 P----LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSG 489
P LA+P+ + S + S + D+ S L G
Sbjct: 476 PEQQELAEPELVAFESSDVEDEAGAEESKDEAGGAGAEDDEDDAAFVSDHEEDGDDLEPG 535
Query: 490 ATIGAAIVEAENSFETDPQENKEEFKAKLKEL-LRDKSDAFNSDNPEEDKVKLGEPGWK- 547
+ ++ D Q ++EF +L L L +DA +++ E K +K
Sbjct: 536 SGSDELLLS-----NLDAQLLEDEFNDELATLALSGMNDADFANDVEACWTKTINNQFKR 590
Query: 548 --ERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+ YY +K K +++ ++ Y + W +HYYY G SW WFYP+HYAPF S
Sbjct: 591 HKKTYYSDKLRYKNISKQQ--LREQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFIS 648
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM-TDP-NSPISDFYPTD 663
D++ + FEL PF PF QLL V P AS+ LP R+LM +DP SPI DFYP +
Sbjct: 649 DVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPLRELMSSDPAKSPICDFYPAN 708
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
FE D+NGKR W+ + +PFI+E RLL+ ++ LT EE RNS
Sbjct: 709 FETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSEENARNS 754
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 118/214 (55%), Gaps = 33/214 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW +E+YP +++VI E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYP-CLSEVINES-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T DE+F +F YI+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEDEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FR--------ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 170
F K+ + +L + E G +P ++ FDSN ITPGT FM L
Sbjct: 102 FMYVEELLLAGKKEIWSARTAHTQLAKALE-NGEIMPSEAR---FDSNCITPGTYFMTRL 157
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEG 204
L +I + D W+ K+ILS N G
Sbjct: 158 HQKLDDWIKTKSATDSRWQGRKIILSGHNQKKSG 191
>gi|347971872|ref|XP_313715.5| AGAP004430-PA [Anopheles gambiae str. PEST]
gi|333469066|gb|EAA09254.6| AGAP004430-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 235/412 (57%), Gaps = 63/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP +++++ E ++P E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYMSERYP-CLSELLREN-------QVP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F+ +F Y++ LF ++RP+++ ++A+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDADVHFRISEEMIFEGIFHYVEYLFKLIRPQQVFFIAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR SAAE + L ++ + +G ++ +S FDSN ITPGT FM L ALQ++I
Sbjct: 102 FR-------SAAEAQDLLEKAKAKGEEISSESP---FDSNCITPGTSFMVRLQNALQHFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+ VILS PGEGEHKIM Y+R + PG++PNTRHCLYGLDADLIM
Sbjct: 152 QVKIATDRLWKACTVILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE +FS+LRE V K G+ D+K +
Sbjct: 212 LGLCTHERYFSLLREEV----------------------------KFGKNDKKTSNLKEI 243
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ L EYL+ EF F D+ ++DD+I + + VGNDF+PHMP L I
Sbjct: 244 R--FYLLHLTLLSEYLELEFASVRDRLRFPFDIHKLIDDWILLVYLVGNDFIPHMPHLHI 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
E A+ L Y + GY+ + +L R++ ++ + +++ +F R
Sbjct: 302 NENALPTLYEAYMDVLPNMDGYINEAGILNLPRLQMLMRRLANFDRDMFLDR 353
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K YY K + EE R + Y L W +HYYY GV SW W+YP+HYAPF
Sbjct: 428 NYKRNYYMSKMGYA--DFTEEVRAEQAECYIRALQWTLHYYYRGVVSWSWYYPHHYAPFI 485
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD+ + + +EL PF PF QLL V P+AS LP Y +LMTDPNS + DFYP +F
Sbjct: 486 SDVDNFAHLKLDYELARPFLPFQQLLSVLPAASKQHLPSAYHQLMTDPNSSVYDFYPVNF 545
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D+NGK+ +W+ + +PFIDE RLL + + LT+EE +RN
Sbjct: 546 ATDLNGKQQAWEAVVLIPFIDEKRLLKAMGPCDAFLTDEEKQRN 589
>gi|395510147|ref|XP_003759342.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 273
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/263 (53%), Positives = 182/263 (69%), Gaps = 1/263 (0%)
Query: 146 LPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGE 205
LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDPGW+ + VILSDA+ PGEGE
Sbjct: 3 LPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGE 62
Query: 206 HKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCF 265
HKIM Y+R QR P +DPNT HCL G DADLIML LATHE +F+I+RE F P + C
Sbjct: 63 HKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIRE-EFKPNKPKPCG 121
Query: 266 LCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPF 325
LC Q GH +C+G + K GE D+ + + + + ++ + LREYL+ E + + PF
Sbjct: 122 LCNQLGHEVKDCQGLPREKQGEHDQFEESLPASEGEFIYIRLNVLREYLERELTMASLPF 181
Query: 326 EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP 385
D+E +DD++FMCFFVGNDFLPH+P+LEIREGAI+ L+ +YK GGYLT+
Sbjct: 182 TFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYV 241
Query: 386 SLRRVEHFIQAVGSYEDRIFQKR 408
+L+RV+ + AVG ED IF+KR
Sbjct: 242 NLQRVQMIMLAVGEVEDSIFKKR 264
>gi|345495292|ref|XP_001606765.2| PREDICTED: 5'-3' exoribonuclease 1-like [Nasonia vitripennis]
Length = 1200
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/415 (39%), Positives = 235/415 (56%), Gaps = 77/415 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP + + E E IP +YDNLYLDMN IIH
Sbjct: 1 MGVPKFFRFISERYPCINKIIKEHE--------IP-----------QYDNLYLDMNSIIH 41
Query: 61 PCFHPED-----RPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
C HP D R F +++F+ + Y++ +F +V+P ++L++A DGVAPRAKMNQ
Sbjct: 42 TCSHPTDSDVHFRIGKKEFSDEDIFENVSRYVEIIFRIVKPLEMLFLAFDGVAPRAKMNQ 101
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR+ RFR ++D +S E E L + ++FD+N ITPGT FMA L
Sbjct: 102 QRANRFRVARD--NSILEREILLTD--------------KLFDANSITPGTVFMADLIDH 145
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
++++I +++ DP W+K K+ILS + PGEGEHKIM ++R + Y+ NTRHCLY LD
Sbjct: 146 MKHFIAYKVSTDPLWQKCKIILSGSEAPGEGEHKIMQFIRYHKAQQNYNSNTRHCLYSLD 205
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
ADLI+L L THE HFS+LRE N GKAK+
Sbjct: 206 ADLIVLGLCTHEPHFSLLRE---------------------KNTFGKAKK---------- 234
Query: 294 EVVVPKKP-YQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
++ P++ + LH+ REYL YEF FE DLE I+DD++ + F VGNDF+P
Sbjct: 235 -MLTPEESDFHLLHLSLFREYLGYEFAPIKSKLKFEFDLEKIIDDWVLIGFLVGNDFIPQ 293
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
+P L I GA+ LL +VY + L GY+ + + +L R E +I+++ E +IF
Sbjct: 294 LPHLNIVNGALPLLYSVYIEVLPTLDGYINEAGELNLSRFEKYIKSLSHVEHKIF 348
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 12/237 (5%)
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENK-EEFKAKLKELLRDKSDAFNSD 532
K S HK+ +T+ + I + + + DP E+ + K K DA + D
Sbjct: 338 KSLSHVEHKI----FASTVSSKICNVKEAKKVDPITGHFEQLSIESK-----KDDAKDLD 388
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
+ K + YY K N + + E +V Y + W ++YYY G CSW
Sbjct: 389 QEMKTKEYSNFEVQRRDYYLHKLNFE--DLSESLILPLVHEYIRAIQWTLNYYYHGCCSW 446
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W++PYHYAPF D+K L+ N+ F++ PF P LL V P A+SH LP+ R L+T+
Sbjct: 447 SWYFPYHYAPFIRDVKGLENINLKFDMAKPFLPLQHLLAVLPPANSHLLPKPLRFLLTNS 506
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
NSPI FYP +FE+D+N K W+ I +PFI+E L+ + TL +E RN+
Sbjct: 507 NSPIIHFYPNEFEIDLNDKSNDWEAIVLIPFINEKELISAMDSYITTLNPKERHRNT 563
>gi|301094845|ref|XP_002896526.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
gi|262109022|gb|EEY67074.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
Length = 1480
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/415 (38%), Positives = 238/415 (57%), Gaps = 55/415 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P FYR+++E+YPL+ +P+ D +P E+D YLDMNGI+H
Sbjct: 1 MGIPRFYRYMSERYPLL------NQPIS-DVSLLP-----------EFDAFYLDMNGIVH 42
Query: 61 PCFH---PEDRPAPTTFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
C H +D + + +F Y+DRL +++P+KL+Y+AIDGVAPRAK+NQQRS
Sbjct: 43 NCTHSDAADDALNSLSLEGQLHGIFTYLDRLITHIIKPKKLVYIAIDGVAPRAKLNQQRS 102
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFRA D + +E ++ + + E KS + FDSN ITPGTEF++ LS L Y
Sbjct: 103 RRFRAGLDRQQAMDKERHMQIKLQDEKDGHKAKSVASKFDSNCITPGTEFLSKLSQHLVY 162
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ ++ +DP W +++V S + VPGEGEHKI+ ++R ++ Y+ N RHC+YG DADL
Sbjct: 163 FVRQKMKSDPLWARLEVFFSGSEVPGEGEHKIVEFIRHRKMTDDYEANLRHCMYGSDADL 222
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
++L L THE HF+++RE V K AK+
Sbjct: 223 MLLGLMTHEPHFTLVRETVVWGSHHKKV---------------AAKQ------------- 254
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ ++ +Q +H+ REYL E R+ +P +D E ++DDFI + F +GNDF+PH PTLEI
Sbjct: 255 IEEQQWQLVHLSLFREYLMMEMRVQSP---LDGERMLDDFILLTFLLGNDFIPHSPTLEI 311
Query: 357 REGAINLLMAVYKKEFRA-LGGYLT-DGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
E AI LL+ VY++ G YLT +G +++ ++ +G+ E+ I RA
Sbjct: 312 SEDAIPLLLKVYRELLETHQGSYLTLNGKITNVKLLQELFHVIGNQEEEILINRA 366
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 109/205 (53%), Gaps = 26/205 (12%)
Query: 532 DNPEEDKVKL-------------GEPGWKE---RYYEEKFNAK--TPEEREETRKDVVLR 573
D PEE K+ L G ++E YY K+ + + + + V
Sbjct: 428 DGPEETKMSLELERSDREVLMLAGSESFQETKWNYYARKYGIQRGNGDAGNKDLEQVKKA 487
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF--NISFE----LGHPFKPFN 627
Y E L W + YY++G SW W+YPYHYAP SDL D+++ N+ F+ + P PF
Sbjct: 488 YMEALVWCLAYYFQGPQSWAWYYPYHYAPMVSDLTDIEEMIGNVKFDEDPSIAGPLLPFE 547
Query: 628 QLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEA 687
QL+ P++SS+ +PE YR LM P SPI FYP F +DM GKR +W+G+ LPFID A
Sbjct: 548 QLMSNLPASSSNLVPESYRFLMVSPVSPIKHFYPETFAIDMEGKRNAWEGVNLLPFIDVA 607
Query: 688 RLLDEVKKI--EHTLTEEEARRNSI 710
L + + + LTE E RRN +
Sbjct: 608 LLKQAIAQFCPDSQLTEAERRRNKL 632
>gi|443920066|gb|ELU40060.1| exonuclease Kem1, putative [Rhizoctonia solani AG-1 IA]
Length = 1536
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 217/369 (58%), Gaps = 46/369 (12%)
Query: 75 DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEER 134
D++F +F Y+D LF ++PRKL +MAIDGVAPRAKMNQQR+RRFR +KDA ++
Sbjct: 386 DQIFTAIFSYVDHLFGKIKPRKLFFMAIDGVAPRAKMNQQRARRFRTAKDAKEA------ 439
Query: 135 LRQEFEREGRKLPPKSDSQVFDSNVITPG-----TEFMAVLSIALQYYIHLRLNNDPGWE 189
R++ E++G KLP + + FDSN ITPG T FM LS L+Y+++ +++ D W
Sbjct: 440 -REKAEKKGEKLP---EEKAFDSNCITPGMHPLGTVFMKKLSEQLKYFVNKKISEDANWR 495
Query: 190 KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFS 249
+++V+LS VPGEGEHKIM Y+RL + P YDPN RHCLYGLDADLIML L +H+ HF
Sbjct: 496 EVQVVLSGHEVPGEGEHKIMEYIRLSKAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFC 555
Query: 250 ILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWT 309
+LRE V Q++K KG + + + LHI
Sbjct: 556 LLREEVKFGPQKNKS--------------------------KGS---LETQSFYLLHISL 586
Query: 310 LREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367
LREYLD EF+ PF+ DLE I+DDF+ + F+GNDFLPH+P L I E A+ L +
Sbjct: 587 LREYLDLEFQSLTSTLPFQYDLERIIDDFVLIAVFIGNDFLPHLPDLHIHENALERLFEI 646
Query: 368 YKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQAR 427
YK GGYL + + R++ + + ++E +F+K Q + + ++ + QA
Sbjct: 647 YKAVLPNAGGYLNESGEIHRGRLQLILDELATWEVDVFEKETSDSQWYKGKQRKHQQQAA 706
Query: 428 RGDDVEPLA 436
+PL+
Sbjct: 707 EKSKSKPLS 715
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 125/185 (67%), Gaps = 3/185 (1%)
Query: 532 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 591
D E+D++K WKE YY+EK K + E+ +V RY EGL WVM+YYY GV S
Sbjct: 816 DEREDDRLKAALKKWKEDYYKEKLEFK---DIEKGVDQLVYRYIEGLQWVMYYYYRGVAS 872
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W WFY YHYAP SD+K+++ F ++ELG PFKPF QL+GV P AS +PE YR+LM
Sbjct: 873 WGWFYDYHYAPRISDIKNIELFEFNYELGKPFKPFEQLMGVLPYASHELIPEAYRELMHS 932
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
+SPI DFYP +F++DMNGK+ W+ + K+PFID+ RLL + +EH LTEEE RRN+
Sbjct: 933 EHSPILDFYPENFDLDMNGKKQEWEAVVKVPFIDQKRLLSSMATLEHRLTEEEKRRNTWG 992
Query: 712 ADMLF 716
+ F
Sbjct: 993 MSIKF 997
>gi|32766355|gb|AAH55175.1| Zgc:63635 protein [Danio rerio]
Length = 510
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 285/580 (49%), Gaps = 118/580 (20%)
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRFR++K+A EE++++ E+ G LP ++ FDSN ITPGT+FMA L L+Y
Sbjct: 11 RRFRSAKEA------EEKIKKALEK-GEVLPTEAR---FDSNCITPGTDFMARLQEQLKY 60
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++H +L+ D W+ + V LS PGEGEHKIM ++R + PG++PNTRHCLYGLDADL
Sbjct: 61 FVHNKLSTDKTWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLYGLDADL 120
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML L +HE HFS+LRE V G++ + KR +
Sbjct: 121 IMLGLTSHEPHFSLLREEVRFGGKKSQ------------------KR-----------IT 151
Query: 297 VPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
P++ + LH+ +REY+DYEF FE DLE I+DD++ M F VGNDF+PH+P
Sbjct: 152 APEETTFHLLHLSLMREYIDYEFSELRKKISFEYDLERIIDDWVLMGFLVGNDFIPHLPH 211
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK------ 407
L I A+ LL Y +LGGYL + +L E +++ + ++ F +
Sbjct: 212 LHINHDALPLLYRTYINVLPSLGGYLNENGHLNLTHFEKYLEKLSDFDREHFSEVFVDLK 271
Query: 408 --RARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 465
+++ ++ A+ G D++ D + ++ G R
Sbjct: 272 WFESKVGNKYVNEAAGLAAEEADGRDMKKSKSSDDSLCLAALDGVR-------------- 317
Query: 466 CVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDK 525
+ T+GR + GA E ++ FET+ ++ K + K +
Sbjct: 318 ------DSHSTAGR-------AEGAEEDG---EDDDMFETEFRQYKRTYYMT-KMGVEVV 360
Query: 526 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 585
SD F ++ + K + W YY Y W +Y
Sbjct: 361 SDEFLAN---QAKCYVEGIQWILHYY----------------------YHGVQSWSWYYP 395
Query: 586 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHY 645
Y HYAPF SD++++ +++F+L PF PF QLL V PSAS LP+ Y
Sbjct: 396 Y------------HYAPFLSDVRNISGLSLTFDLAKPFMPFEQLLAVLPSASKDLLPQCY 443
Query: 646 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFID
Sbjct: 444 QHLMTSLSSPIVEYYPQDFKTDLNGKQQEWEAVVLIPFID 483
>gi|195059493|ref|XP_001995648.1| GH17871 [Drosophila grimshawi]
gi|193896434|gb|EDV95300.1| GH17871 [Drosophila grimshawi]
Length = 1754
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/418 (38%), Positives = 239/418 (57%), Gaps = 69/418 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R ++E+YP ++++ E IP E+DNL+LD+NGI+H
Sbjct: 1 MGVPKFFRHISERYP-CLSELAREH-------SIP-----------EFDNLFLDVNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +++YID LF +++P+KL ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDGNIHFHLEETQIFQDIYNYIDTLFYLIKPQKLFFVSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDA--ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
FR +++A D+ A + ++ ER FDSN ITPGT FM+ L L+
Sbjct: 102 FRTAREAEQIDAKALQRGEKRMHER-------------FDSNCITPGTGFMSRLQKGLRC 148
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
++ +++ D W+K VILS PGEGEHKIM Y+R + P +DPN RHCLYGLDADL
Sbjct: 149 FLRTKVSTDTLWQKCCVILSGVETPGEGEHKIMDYIRYLKAQPDFDPNMRHCLYGLDADL 208
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
I+L L THE+HF +LRE V +F +
Sbjct: 209 IILGLCTHELHFVVLREEV-------------------------------KFGKNVKRTA 237
Query: 297 VPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
V + + LH+ LREYL+ EF + ++D+ ++DD++ M F VGNDF+P +P L
Sbjct: 238 VEETRFFLLHLGLLREYLELEFAELSKSERKLDVAQLIDDWVLMGFLVGNDFIPSLPLLH 297
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA-RLH 412
I A++LL Y + + LGG + + + +L+R+ F+ A+ E +IF +++ +LH
Sbjct: 298 IHTNALSLLYKTYIRVYPQLGGNINEQGRLNLQRLAIFMNALSEVEMQIFDEQSDKLH 355
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+K YY KF E + ++ Y L WV+ YYY GV SW W+YPYHYAPF
Sbjct: 410 NFKRNYYRNKFKN---EMHDGLIAELGHHYVTALQWVLDYYYRGVQSWDWYYPYHYAPFI 466
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD+ D+ I+F++G PF PF QLL V P ASS LP Y LM +P+S ++DFYP +F
Sbjct: 467 SDITDIPSVKINFQMGKPFMPFEQLLAVLPPASSALLPVAYHDLMLNPSSTLADFYPKEF 526
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
E D+NGK + W+ + +PFID+ RLLD + + + LT EE RN
Sbjct: 527 ETDLNGKMHEWEAVVLIPFIDQRRLLDAMSECDSQLTTEERLRN 570
>gi|45187827|ref|NP_984050.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|44982611|gb|AAS51874.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|374107264|gb|AEY96172.1| FADL046Cp [Ashbya gossypii FDAG1]
Length = 1474
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 238/411 (57%), Gaps = 64/411 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++P + +IDG +I ++DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYVSERWPNISQ--------LIDGTQIS-----------QFDNLYLDMNSILH 41
Query: 61 PCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
H +D + +EVF +F YID LF ++P++ LYMAIDGVAPRAKMNQQR+RR
Sbjct: 42 TATHGNEDDIKKRLSEEEVFARIFVYIDHLFHTIKPQQTLYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++ DA E L + ER G ++P + + FDSN ITPGTEFM L+ L+Y+I
Sbjct: 102 FRSAMDA------ETSLNRARER-GDEIP---EGEPFDSNSITPGTEFMHKLTTNLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H ++++D W+ +ILS VPGEGEHKIM Y+R R Y+PNTRHC+YGLDADLIM
Sbjct: 152 HEKVSSDSLWQNKNIILSGHEVPGEGEHKIMQYIRTLRAQQDYNPNTRHCIYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+ H+ H ++LRE + G+A++ +
Sbjct: 212 LGLSIHDTHVALLREEILY---------------------GRAQKPKA----------LE 240
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
++ + LH+ +REYL+ EF+ + F+ D E ++DDFI + F +GNDFLP++P L +
Sbjct: 241 QQNFYLLHLAIMREYLELEFQEISDELEFKFDFERLLDDFILVMFVIGNDFLPNLPDLHL 300
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
+GA +L+ +K+ + L GY+ + + R ++ + +E F++
Sbjct: 301 NKGAFPVLLQTFKETLKHLDGYINENGTINFARFSVWLDYLSKFELMNFER 351
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 106/173 (61%), Gaps = 2/173 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK+ YY+EK +E + K++ Y EGL WV++YYY+G SW W+Y YHYAP S
Sbjct: 510 WKDSYYKEKVGFSIHDE--DKLKEMANNYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRIS 567
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D++ NISF L PFKPF QL+ V P+ S LP YR LM D SPI D YP + E
Sbjct: 568 DIRKGLDVNISFSLDQPFKPFQQLMAVLPARSKELLPPVYRPLMYDDKSPILDLYPAEVE 627
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVL 718
+D NGK W+ + KL F+D+ RLL + ++ LT EE +RN + D++FV
Sbjct: 628 LDKNGKTADWEAVVKLKFVDQDRLLAAMAPLDDLLTPEEKKRNIVGTDLIFVF 680
>gi|307194446|gb|EFN76744.1| 5'-3' exoribonuclease 1 [Harpegnathos saltator]
Length = 1642
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/410 (39%), Positives = 231/410 (56%), Gaps = 65/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E++P +++ I+E ++P E+D LYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERHP-CLSETIKE-------YQMP-----------EFDYLYLDMNGIVH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D +F +F YI+ LF M+RP+KL +MAIDGVAPRAK+NQQRSRR
Sbjct: 42 ACSHPNDSDVHFRISEDTIFNNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +KDA A + G +P + FDSN ITPGT FMA L+ L +I
Sbjct: 102 FRTAKDAEVQEANAKI-------HGLVIPTEKK---FDSNCITPGTFFMAELTRRLNRFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+K KV+ S + VPGEGEHKIM ++R + YD N+RHCLYGLDADLIM
Sbjct: 152 VHKISIDDTWKKCKVLFSGSEVPGEGEHKIMDFIRHMKASKDYDFNSRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +HE +FS+LRE V +F +K ++ P
Sbjct: 212 LGLCSHEPNFSLLREEV-------------------------------KFGKKQKKIQTP 240
Query: 299 KKP-YQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ + LH+ LREY+D+EF F D+E I+DD++ M F VGNDF+PH+P L
Sbjct: 241 EETKFCLLHLSLLREYIDHEFSPVKDKISFPYDIEKIIDDWVLMGFLVGNDFIPHLPNLH 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
I GA+ +L Y + GY+ + +L R E F++ + + + F
Sbjct: 301 ITSGALPILYRAYMEVLPTFEGYINETGTLNLNRFEKFMERLSRLDVKQF 350
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 88/136 (64%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + W +HYYY G CSW W+YP+HYAP+ SD+KD + FELG PF PF QLL V
Sbjct: 461 YVRAIQWNLHYYYNGCCSWSWYYPHHYAPYISDIKDFKDLKLEFELGEPFLPFEQLLAVL 520
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+ S LP ++ L+ + +SPI +YPTDF+ D+NGK+ W+ + +PFIDE LL +
Sbjct: 521 PAYSKDLLPVTFQSLLVEKDSPIISYYPTDFKTDLNGKQQEWEAVVLIPFIDEKLLLAAM 580
Query: 694 KKIEHTLTEEEARRNS 709
+ LT EE +RN+
Sbjct: 581 QPHLSKLTPEEKQRNA 596
>gi|312371117|gb|EFR19377.1| hypothetical protein AND_22598 [Anopheles darlingi]
Length = 380
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 232/409 (56%), Gaps = 63/409 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP +++++ E ++P E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-CLSELLREN-------QVP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D E +F+ +F Y++ LF M+RP+K+ ++A+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDADVTYRISEEMIFEGIFHYVEYLFKMIRPQKVFFIAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++ +A E+L+ + G +P D FDSN ITPGT FM L AL+++I
Sbjct: 102 FRSAHEAG------EQLKAAIAK-GETIP---DEDRFDSNCITPGTAFMVRLQKALEHFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+ VILS PGEGEHKIM Y+R + PG++PNTRHCLYGLDADLIM
Sbjct: 152 QVKIATDILWKACTVILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L THE FS+LRE V K G+ D+K V+
Sbjct: 212 LGLCTHERFFSLLREEV----------------------------KFGKNDKKA--TVMK 241
Query: 299 KKPYQFLHIWTLREYLDYEF-RIPNP-PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + LH+ L EYL+ EF + N F D+ ++DD+I M + VGNDF+PH+P L I
Sbjct: 242 EIRFYLLHLTLLSEYLELEFASVRNKLRFPFDIHKLIDDWILMIYLVGNDFIPHLPNLHI 301
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
E A+ L Y + GY+ + +L R++ ++ + ++ F
Sbjct: 302 NENALPTLYRAYMDVLPEMDGYINESGILNLPRLQLLMRRLAVFDRDTF 350
>gi|320169903|gb|EFW46802.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1548
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 217/424 (51%), Gaps = 87/424 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGV R L E+YPL++ T P+ + +DNLYLD NGI H
Sbjct: 1 MGVIRLTRALVERYPLIL------------------RTIGPSNDAPLFDNLYLDFNGIAH 42
Query: 61 PCFHPEDRPAPTTFDEV--FQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
H +D E+ MF IDRL + RP+KL+Y+AIDGVAPRAKMNQQR RR
Sbjct: 43 NASHGKDDAGAAAISELEMMSAMFAAIDRLVEVARPQKLVYIAIDGVAPRAKMNQQRQRR 102
Query: 119 FRASKDAADSAAEEERLR--------QEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVL 170
+ ++ A + E + +E E E R LP FD+N ITPGTEFM +
Sbjct: 103 LKTARAAEKARTEASAIGDLTGAKPIEEIEAEARALP-------FDANCITPGTEFMDRM 155
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
L YYI ++ P W ++VILS PGEGEHKI+ ++R Q++ PGY+PNTRHC+Y
Sbjct: 156 EAYLSYYIKRKITESPQWSSLQVILSGHRTPGEGEHKIVDWIRAQKSQPGYNPNTRHCMY 215
Query: 231 GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDE 290
GLDADLIML+LA HE HF+ILRE V F + AA+ + +A
Sbjct: 216 GLDADLIMLSLAMHEPHFAILREKVL--------FRSKKASVNAADARSEVAFQA----- 262
Query: 291 KGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----------NPPFE-------------- 326
DE+ Q L+I LREYLD EF + + P E
Sbjct: 263 -TDEL-------QLLYIGLLREYLDMEFGLSAGFKRSDGLRHGPLEKLMEQQQKAATPAL 314
Query: 327 -------IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+LE +DDFIF+CF +GNDFLPHMP +I G ++ Y++ +L YL
Sbjct: 315 TSQSVSAWNLERTIDDFIFLCFIIGNDFLPHMPGFDIDSGGLDFAFEAYRQVRNSLNDYL 374
Query: 380 TDGS 383
+ S
Sbjct: 375 VNAS 378
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 15/182 (8%)
Query: 543 EPGWKERYYEEKFN---AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
E +K YY F+ + TP R+ ++ Y EGL WV+HYY +G+ SW W++PYH
Sbjct: 684 EASYKSSYYATYFDDVVSNTPSLRK-----LIKHYLEGLVWVLHYYTQGLASWSWYFPYH 738
Query: 600 YAPFASDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
+APFASD+ +L + I F P P+ QLL V P AS+ LP R LMT ++
Sbjct: 739 FAPFASDMVNLGELYGQIHFPADSPLNPYEQLLAVLPLASAQFLPAPLRPLMT---GALA 795
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK--IEHTLTEEEARRNSIMADML 715
+FY TD V + K ++ + +PFID RL EV+ +LT EE R S+ L
Sbjct: 796 EFYRTDHRVIPDEKGREYKDVLLIPFIDIERLRAEVRTALASGSLTAEERTRGSLGQAQL 855
Query: 716 FV 717
FV
Sbjct: 856 FV 857
>gi|399949668|gb|AFP65326.1| dhm exonuclease [Chroomonas mesostigmatica CCMP1168]
Length = 549
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 234/409 (57%), Gaps = 56/409 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YPL+ ++E ++D YLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPLINQRLLENN---------------------QFDCFYLDMNGIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C + +E+F+ +F Y D LF +VRPRKL+Y+AIDGVAPRAKMNQQRSRRFR
Sbjct: 40 NCSQKNNEIGTQYEEELFRKIFSYTDHLFRIVRPRKLIYLAIDGVAPRAKMNQQRSRRFR 99
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+ K+ E+ +L QE + +P ++ + + FDSN ITPGT FM LS + + ++
Sbjct: 100 SVKE-----LEKTKLTQE-----KNVPLENFEKKYFDSNCITPGTTFMKRLSQSFKKWLA 149
Query: 180 LRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVR-LQRNLPGYDPNTRHCLYGLDADLI 237
++ NDP W++ +I S + VPGEGEHKIM+Y+R +Q++ + RHCLYGLDADLI
Sbjct: 150 KKIRNDPEWQQGCDIIFSGSEVPGEGEHKIMNYIRKIQKSKSRKITSLRHCLYGLDADLI 209
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L HE F++LRE K G P + K+ +F ++ D
Sbjct: 210 MLGLVAHENQFTLLRE---------KLIWKGTP----------SSNKSVDFFKRKDNFAG 250
Query: 298 PKKPYQFLHIWTLREYLDYEFR-IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ + L I LR+ L EF+ F+ ++E IVDDFIF+C +GNDFLP +P L+I
Sbjct: 251 DE--FHLLEISLLRDMLYLEFKPKERCEFDYNIERIVDDFIFICMLIGNDFLPSLPHLDI 308
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
G +NLL+ Y++ GYLT + + RVE F++ + + + F
Sbjct: 309 ASGGLNLLVRSYQEIQLKTKGYLTSKHRMHIGRVELFLEKISNEAEEFF 357
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 3/177 (1%)
Query: 545 GWKERYYEEKFNAKT-PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 603
+K+ YY K +E ++ ++ Y GL W ++YY+ G SW W+YP +Y P
Sbjct: 372 NYKKDYYSTKLMFDIFSKESDKFLSILITNYIHGLNWCLYYYHLGCPSWNWYYPEYYTPL 431
Query: 604 ASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
ASDLK+L + I+F G PF+P QLL V P SS LP+ + LM NSPI +FYP +
Sbjct: 432 ASDLKNLYKIKINFTKGRPFEPLMQLLSVLPPNSSSFLPKSFENLMIQKNSPILNFYPLN 491
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEEARRNSIMADMLFVL 718
+++D+NGK+ W+GI LPFID+ +L D VK+ + E+E RN D++F L
Sbjct: 492 YKIDLNGKKNLWEGIVVLPFIDQKKLSDAVKRYGKKQNFNEDEKIRNCFGKDVIFFL 548
>gi|320169726|gb|EFW46625.1| Dhm2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1615
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 211/380 (55%), Gaps = 65/380 (17%)
Query: 55 MNGIIHPCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
MNGIIH C HP D T D++F +F YID LF ++RP++ +MA+DGVAPRAKMN
Sbjct: 1 MNGIIHNCSHPNDVDPSFRITEDKIFAEIFAYIDHLFNIIRPQRTFFMAVDGVAPRAKMN 60
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQR+RRFR SA E E E R G+ +P +++ FDSN ITPGT FM+ LS+
Sbjct: 61 QQRARRFR-------SAKENESKLAEARRSGKPIP---ETEPFDSNCITPGTAFMSKLSV 110
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L+Y+I ++ D W ++VILS +PGEGEHKIM YVR Q++LPGYDPNTRHCLYGL
Sbjct: 111 QLKYFISRKITTDRAWRNVEVILSGHEIPGEGEHKIMEYVRTQKSLPGYDPNTRHCLYGL 170
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DADL++L LA+HE F +LRE V +G +K G G
Sbjct: 171 DADLMILGLASHEPQFCLLREEV----------------KFGGGKKGPQSKKTG-----G 209
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI------------------------- 327
+ + + LH+ LREYL+ EFR P F++
Sbjct: 210 ADAIT----FFLLHLSLLREYLEVEFR---PAFDMAQAEYKAALAALPAGTPAPPAPLVF 262
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 387
+LE ++DD++ M + +GNDF+PH+P L I GA L VY + YL + L
Sbjct: 263 NLESVIDDWVLMGYLIGNDFIPHLPHLHIDTGAWEYLYKVYGEIVPKQQSYLNINGRIHL 322
Query: 388 RRVEHFIQAVGSYEDRIFQK 407
E F++ + ++ IFQ+
Sbjct: 323 PTFELFMERLSRFDFDIFQE 342
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 83/125 (66%)
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W W+YP+HY+P+ASDL+ +I FELG PF+PF QLLGV P+AS H LP Y +LMT
Sbjct: 434 WGWYYPFHYSPYASDLRGFSHLHIEFELGKPFRPFQQLLGVLPAASKHLLPPVYHELMTS 493
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
P SP+ D YP DFE D+NGK+ W+ + +PFIDE RLL +K + L EE RN
Sbjct: 494 PMSPVIDLYPLDFESDLNGKKNEWEAVILIPFIDEKRLLAAMKPFDARLNAEERARNRYG 553
Query: 712 ADMLF 716
++ F
Sbjct: 554 QELSF 558
>gi|449018780|dbj|BAM82182.1| exonuclease [Cyanidioschyzon merolae strain 10D]
Length = 829
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 233/437 (53%), Gaps = 60/437 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+RWL+ +YP++ ++G + E+DN YLDMNGIIH
Sbjct: 1 MGIPRFFRWLSLRYPVINQS--------LEGDR-------------EFDNFYLDMNGIIH 39
Query: 61 PCFHPEDRPAPTTFDEV--FQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D DEV F +F Y DRL+ +V+PRK L++A+DGVAPRAKMNQQRSRR
Sbjct: 40 TCTHNNDGDI-IFLDEVEMFARIFAYTDRLYRIVKPRKFLFLAVDGVAPRAKMNQQRSRR 98
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A ER+ E G L + FDSN ITPGT FM LS A + +I
Sbjct: 99 FRSAKEA-------ERVLAEAIARG-DLEDGFIEERFDSNCITPGTAFMDRLSQAFREWI 150
Query: 179 HLRLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNLPGY--DPNTRHCLYGLDAD 235
++ ND W+ KV+ S VPGEGEHKIM +R + + D RHC+YGLDAD
Sbjct: 151 DYKMRNDRAWQTGCKVVFSGPEVPGEGEHKIMEMIREIKRQHRHRGDMPIRHCMYGLDAD 210
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCF----------------LCGQPGHLAANCEG 279
LIML L THE +F++LRE + G+ + + G +
Sbjct: 211 LIMLGLVTHEPYFALLREKLVYRGRIGERLGAAARSPPITSLSNPAAASESGDNSPLARA 270
Query: 280 KAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEF-------RIPNPPFEIDLECI 332
A R+ G D + + + + L I LR+ L EF R PPF +DLE I
Sbjct: 271 LAARRMGLVDAPAN--LDDFEEFHLLEINLLRDELYKEFAELASRQRSDAPPFHVDLERI 328
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 392
VDDF+FM VGNDFLPH+P L+I +GA+ LL YK+ +GGYLTD + R+E
Sbjct: 329 VDDFMFMGVLVGNDFLPHLPHLDISDGALELLFGAYKELLPIMGGYLTDKHRIHPDRLEA 388
Query: 393 FIQAVGSYEDRIFQKRA 409
F + E F +R
Sbjct: 389 FAARLAEEERAYFNRRG 405
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 123/210 (58%), Gaps = 8/210 (3%)
Query: 512 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP-GWKERYYEEKF--NAKTPEEREETRK 568
E F A+L E ++ FN +E+ + +P ++ YY +KF N P+ E R
Sbjct: 387 EAFAARLAE---EERAYFNRRGVDENIQEYCDPERYRVAYYRDKFRLNLDAPDGNERLRG 443
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
V+ Y EGL WV+ YY+ G SW W+YPY++AP SDL+DL + + F G PF P Q
Sbjct: 444 QVIQSYLEGLHWVLQYYHHGCPSWTWYYPYYFAPLCSDLRDLGSYKVRFLKGKPFTPLTQ 503
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
LLGV P SS LP YR+LM D SP+ DFYP +F D+NGKR+ W+ + LPFI+E R
Sbjct: 504 LLGVLPPESSGELPPPYRQLMLDLESPVRDFYPAEFRTDLNGKRFDWEAVVLLPFIEERR 563
Query: 689 LLDEVKKIE--HTLTEEEARRNSIMADMLF 716
LL+ V I+ LT EE RR+ + +F
Sbjct: 564 LLEAVGSIDPHRELTSEERRRDLFGQNDVF 593
>gi|393910356|gb|EFO19268.2| hypothetical protein LOAG_09226 [Loa loa]
Length = 1318
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 252/522 (48%), Gaps = 69/522 (13%)
Query: 209 MSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCG 268
M ++R +R+ YD NTRHCLYGLDADLIML + +HE HF++LRE V Q+
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLIMLGICSHEPHFALLREEVKFGRQR------- 53
Query: 269 QPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFE 326
N GK K E + LH+ LREYL +EF PFE
Sbjct: 54 -------NHNGKHKTGVNEI------------TFHLLHLSLLREYLSWEFHSLKEKLPFE 94
Query: 327 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS 386
DLE ++DD++ M F VGNDF+PH+P + I E A+ LL A Y + L GY+ + +
Sbjct: 95 YDLESVIDDWVLMGFLVGNDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINEAGVLN 154
Query: 387 LRRVEHFIQAVGSYEDRIFQKR----ARLHQRHAERI--KREKAQARRGDDVEPLAQPDS 440
L+R E F++ + + F ++ A L + K Q +D+EP
Sbjct: 155 LKRFEIFLKNFAKNDRKNFIEQMDDEAYLSSKRISNAWKKGPNDQQNCDEDLEPFD---- 210
Query: 441 LVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKV--PRLSSGATIGAAIVE 498
L+ ++ G D+ S ++ PR+ + AA
Sbjct: 211 -----------LSDAEKTEITEKDSRKGAFDSDSNASDECEEIAGPRI-----LTAAKRM 254
Query: 499 AENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPE-EDKVKLGEPGWKERYYEEKF-- 555
F D + + A LL D+S + D V K YY +K
Sbjct: 255 THGYFGLDKDSDNDLPIA----LLDDESYENDYDQSSWTPVVSRAFKNHKRDYYNDKMKY 310
Query: 556 -NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 614
N E RE+ Y + W +HYYY G CSW WFYP+HYAP+ SD+ D +
Sbjct: 311 SNISKEELREQAEG-----YIRAIQWNLHYYYHGCCSWSWFYPHHYAPYISDVSDFAEME 365
Query: 615 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
++F+L PFKPF QLL V P+AS+ LP YR+LM+DP SPI DFYP F+ D+NGK+
Sbjct: 366 MNFDLSEPFKPFEQLLAVLPAASADCLPLPYRELMSDPKSPIIDFYPEQFDTDLNGKKND 425
Query: 675 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
W+ + +PFI E RLL + + LT+EE +RN +LF
Sbjct: 426 WEAVVLIPFIREDRLLQAMAIKDPLLTDEERKRNLHGPHLLF 467
>gi|162606084|ref|XP_001713557.1| very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
gi|13794477|gb|AAK39852.1|AF165818_60 very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
Length = 542
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 166/412 (40%), Positives = 221/412 (53%), Gaps = 69/412 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YPL+ + E+ E+D YLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPLINQKIFEKS---------------------EFDCFYLDMNGIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
CF D +FQ +FDY + L+ ++ P+KLLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 40 TCFQKIASEQNFNKDILFQKIFDYTEYLYTIIHPKKLLYLAIDGVAPRAKMNQQRSRRFR 99
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A KD + + R R DSN ITPGT FMA LS A + ++
Sbjct: 100 AIKDNEKKSDFDHRNRLNL--------------TLDSNCITPGTSFMAELSYAFKIWLEK 145
Query: 181 RLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVRLQRNLPGY-DPNTRHCLYGLDADLIM 238
++ D W+ +I S A VPGEGEHKIM+++R +NL D HCLYGLDADLIM
Sbjct: 146 KIKTDIEWQTGCDIIFSGAEVPGEGEHKIMNFIRKLKNLKNNPDLILSHCLYGLDADLIM 205
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG---EFDEKGDEV 295
L L +HE +F++LRE +G + K G EF++
Sbjct: 206 LGLVSHEKNFTLLRE--------------------KLAWKGTSNVKEGYNYEFEKS---- 241
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEID--LECIVDDFIFMCFFVGNDFLPHMPT 353
P + L I LRE L EFR P + D +E IVDDF+FMC +GNDFLP +P
Sbjct: 242 --PSDDFHLLEISLLREMLYLEFR-PREFLDQDYNMERIVDDFVFMCMLIGNDFLPGIPH 298
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
L+I G +NLL+ YK+ + + GYLT+ SK + R E F + + + ++
Sbjct: 299 LDIGYGGLNLLVRSYKEIQKHIHGYLTNKSKIHVGRAELFFEKLSVESEELY 350
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 108/179 (60%), Gaps = 5/179 (2%)
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHY 600
L +K YY +K N +E D++ Y EGL W ++YY++G SW WFYP +Y
Sbjct: 362 LCSNDYKMEYYVKKLNCSVSNNKERIN-DLIQTYIEGLHWCLYYYHKGCPSWNWFYPEYY 420
Query: 601 APFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFY 660
AP ASDLK L + I F+ G PF+P QLL V P S + LP + +LM +SP+ D+Y
Sbjct: 421 APLASDLKSLKKIKIKFKKGKPFEPLVQLLAVLPPNSRNLLPISFSRLMVKKDSPVIDYY 480
Query: 661 PTDFEVDMNGKRYSWQGIAKLPFIDEARL---LDEVKKIEHTLTEEEARRNSIMADMLF 716
P ++++DMNGK+ W+G+ LPFI+E+ L LD +K TL +EE RNS D+ F
Sbjct: 481 PLEYKIDMNGKKNLWEGVVILPFINESNLVLTLDNMKT-RSTLNDEENTRNSFGKDVTF 538
>gi|241950323|ref|XP_002417884.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
gi|223641222|emb|CAX45602.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
Length = 1487
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 214/357 (59%), Gaps = 44/357 (12%)
Query: 55 MNGIIHPCFHPEDRPAP-TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H C H D + D+++ +F+YI+ LF +++P+K YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDNTITRLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR+RRFR + +A E L++ E G ++P K D FDSN ITPGTEFMA L+
Sbjct: 61 QRARRFRTAYEA------EINLKKAIEN-GEEIP-KEDP--FDSNSITPGTEFMAKLTNN 110
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+IH ++ D W I+++LS VPGEGEHKIM Y+R R+ Y+PN RHC+YGLD
Sbjct: 111 LKYFIHKKITEDSSWANIEIVLSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIYGLD 170
Query: 234 ADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
ADLIML L TH+ HF++LR EV F P +RK G D
Sbjct: 171 ADLIMLGLVTHDPHFALLREEVTFGP-----------------------QRKIGPKD--- 204
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFR-IPNP-PFEIDLECIVDDFIFMCFFVGNDFLPH 350
+ + + LH+ LREYL EF+ I N FE D + I+DDFI + + +GNDFLP+
Sbjct: 205 ----LHDQKFYLLHLSLLREYLSLEFQEIENQLNFEYDFDKILDDFILIMYVIGNDFLPN 260
Query: 351 MPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
+P L I +GA LL+A +K+ GY+ + K +L R+ +I+ + +E F+K
Sbjct: 261 LPDLFINKGAFPLLIAAFKQTLLDSDGYINENGKINLVRLNIYIKFLSKFEFENFEK 317
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
Query: 545 GWKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 603
WK YY+ K + + EE + ++ Y EGL WV++YYY G SW W+Y YHYAP
Sbjct: 477 SWKNDYYQSKLHFSIDTEEGKNKLIELTKHYIEGLQWVLYYYYRGCPSWNWYYKYHYAPR 536
Query: 604 ASD----LKDL--DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
SD L++L ++ ++FEL HPFKPF QL+ V P+ S +P YR LMTD SPI
Sbjct: 537 ISDISLGLEELINEKIELNFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMTDEKSPII 596
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+FYP + E+DMNGK SW+ + L F+DE +L++ +K IE LT EE +RNS + F+
Sbjct: 597 NFYPHEVEIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTFEEKQRNSYGHAIKFI 656
>gi|342182115|emb|CCC91594.1| putative exoribonuclease 1 [Trypanosoma congolense IL3000]
Length = 1296
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 245/433 (56%), Gaps = 60/433 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW+AE+YP+V+ + P V DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWIAERYPMVITPFRDFPPPV--------------------DNLYLDVNGIIH 40
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C HP D + T E+ + MF Y+++LF ++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCSHPNDANSSAKVLTEKEMIEAMFVYLEKLFHAIQPRKCFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R+R S E R+ EG +L + VFDSN ITPGTEFM +S L+Y+
Sbjct: 101 RYR-------SGYEMMVARERAAAEGMEL---LEENVFDSNCITPGTEFMVNVSEHLKYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++++DP W+ KV+ S + PGEGEHKI+ Y+R ++ Y+PN H LYGLDADLI
Sbjct: 151 IMMKVSSDPAWQSCKVVYSGHDHPGEGEHKIVDYIRRRKMQEDYNPNETHSLYGLDADLI 210
Query: 238 MLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
+LALATHE H +LREVV F P Q +A R+ E DE + +V
Sbjct: 211 LLALATHEPHLVLLREVVSFGPSQGS-----------------RADREQRENDE-ANGIV 252
Query: 297 VPK---KPYQFL--HIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFFVGNDFL 348
K KP +F+ H+ LR YLD E R P DLE ++DDF+FMC F+GNDFL
Sbjct: 253 ADKTYNKPDEFVLFHVNILRNYLDLEVRYVLGGKLPAGYDLEHVIDDFVFMCIFIGNDFL 312
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
P +PTL IR+G++ ++ +Y + G LT+ + V+ ++Q + E + R
Sbjct: 313 PSIPTLGIRDGSVVKMVEIYATKIVKNGRRLTEDGSINWDAVDTWLQELAKDELPTIKSR 372
Query: 409 ARLHQRHAERIKR 421
A + + R+ R
Sbjct: 373 ALQERAYQSRMAR 385
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 97/175 (55%), Gaps = 3/175 (1%)
Query: 546 WKERYYEEKFN-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
+KE+YY EK + E + L Y EG+ WV+ YYY+G SW+WFYP+HYAP A
Sbjct: 406 YKEKYYREKHGFGDGWNPQGENMAKLKLHYVEGIAWVLEYYYQGPPSWKWFYPHHYAPMA 465
Query: 605 SDLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
SDL DL + F+ G PF P QLL V P S +P Y L+ SP++ ++P
Sbjct: 466 SDLVDLAAVASRVRFDPGEPFLPHQQLLAVLPPMSYRLVPRAYWPLLRSKGSPLAKYFPE 525
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
++D G R W+G+ +PFIDE LL + ++ +T E+ + NS +LF
Sbjct: 526 KLQIDREGARAEWEGVVLIPFIDERVLLAAYESVQSKVTPEDRKNNSPGPPILFT 580
>gi|345326399|ref|XP_003431040.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ornithorhynchus anatinus]
Length = 1614
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/564 (31%), Positives = 269/564 (47%), Gaps = 103/564 (18%)
Query: 152 SQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSY 211
S F+ ++ GTEFMA L L+Y+++++++ D W+ + + LS PGEGEHKIM +
Sbjct: 26 SHQFNLTLLGWGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYLSGHETPGEGEHKIMEF 85
Query: 212 VRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPG 271
+R ++ +DPNTRHCLYGLDADLIML L +HE HFS+LRE V G+
Sbjct: 86 IRSEKAKKDHDPNTRHCLYGLDADLIMLGLTSHESHFSLLREEVRFSGK----------- 134
Query: 272 HLAANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEID 328
K V P++ + LH+ +REY+DYEF + F+ D
Sbjct: 135 -------------------KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKSKISFKYD 175
Query: 329 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 388
+E I+DD+I M F VGNDF+PH+P L I A+ LL Y LGGY+ + +L
Sbjct: 176 IERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYRTYMTTLPELGGYINENGHLNLP 235
Query: 389 RVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH 448
R E ++ + ++ F + + + +++ G+ A + +
Sbjct: 236 RFEKYLVKLSDFDREHFNEVF---------VDLKWFESKVGNKYLNEAAGIAAEEAKNYK 286
Query: 449 GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAE----NSFE 504
+L S + S C+ L+ +G AT +++E E + FE
Sbjct: 287 QKKLKS------QENSICLAALNKTEGE-------------ATTSKSVLEDEPEDDDLFE 327
Query: 505 TDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEERE 564
T+ ++ K + K + SD F +D E + W YY
Sbjct: 328 TEFRQYKRTYYM-TKMGVEVVSDEFLADQAE---CYIQAIQWILHYY------------- 370
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFK 624
+ W Y+Y AP+ SD++++ +F I FELG PF
Sbjct: 371 -------YHGVQSWSWFYPYHY--------------APYLSDIRNIKEFKIQFELGKPFM 409
Query: 625 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFI 684
PF QLL V P+AS LP Y+ LMT +SPI ++YPTDF+ D+NGK+ W+ + +PFI
Sbjct: 410 PFEQLLAVLPAASKDLLPVCYQHLMTSEDSPIIEYYPTDFKTDLNGKQQEWEAVVLIPFI 469
Query: 685 DEARLLDEVKKIEHTLTEEEARRN 708
DE RLL ++ L +EE RN
Sbjct: 470 DENRLLQAMEPCNKNLKKEEETRN 493
>gi|342878482|gb|EGU79819.1| hypothetical protein FOXB_09678 [Fusarium oxysporum Fo5176]
Length = 1380
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 228/385 (59%), Gaps = 51/385 (13%)
Query: 55 MNGIIHPCFHP---EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
MNGIIH C H ED + +E+F +F+YI+ LF ++P++L +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKM 60
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
NQQRSRRFR + DA E+ R++ +EG ++P + + FDSN ITPGTEFMA LS
Sbjct: 61 NQQRSRRFRTALDA-------EKAREKAIKEGVEIPKE---EPFDSNCITPGTEFMAKLS 110
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYG 231
L+Y+++ +++ D W+ +++LS VPGEGEHKIM Y+R + P Y+ N RHCLYG
Sbjct: 111 QQLRYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNQNVRHCLYG 170
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
LDADLIML L +H+ HF +LRE V T G+ +K K+ E + +
Sbjct: 171 LDADLIMLGLLSHDPHFCLLREEV-TFGR-------------------ASKTKSKELEHQ 210
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----PFEIDLECIVDDFIFMCFFVGNDF 347
+ LH+ +REYL+ EF+ F DLE ++DDFI M FFVGNDF
Sbjct: 211 N---------FYLLHLCIVREYLEMEFQELQEDGALSFPFDLERVIDDFILMAFFVGNDF 261
Query: 348 LPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI-----QAVGSYED 402
LP++P+L I EGA+ + +YK GY+ + ++ R++ + + ++E+
Sbjct: 262 LPNLPSLHINEGALAKMFRIYKSILPKCDGYMNENGVINMERLQRLLGELSKTEIDAFEN 321
Query: 403 RIFQKRARLHQRHAERIKREKAQAR 427
+ ++ ++ ++++ + A+A+
Sbjct: 322 DVSDEKWFASKQMEKKLENKNAEAK 346
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 106/173 (61%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
GWK +YY +KF P+ ++ + Y +GL WV++YYY+G+ SW WFY YHYAP
Sbjct: 479 GWKTKYYLQKFEEWAPDNYDKELTALCENYVQGLQWVLYYYYQGIASWPWFYGYHYAPLI 538
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD+ +++F+ G PF P+ QL+GV P S +P+ Y LMT+P+SPI DFYP DF
Sbjct: 539 SDVVKGVGADLNFKKGQPFLPYEQLMGVLPDRSKKIVPKVYHDLMTNPDSPIIDFYPRDF 598
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
E+DMNGK+ W+ + K+PFIDE RLL + L +E RN + F
Sbjct: 599 ELDMNGKKMDWEAVIKIPFIDEKRLLAAMAPKNELLEPDEKARNGFGVPLKFT 651
>gi|189209730|ref|XP_001941197.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977290|gb|EDU43916.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1391
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 228/393 (58%), Gaps = 49/393 (12%)
Query: 55 MNGIIHPCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
MNGIIH C H + A + D++F +F+YI+ LF ++P++L +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHNCTHNDSDSVTARKSEDQMFISIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMN 60
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQR+RRFR +A + E+ R++ REG ++P + + FDSN ITPGT FMA L+
Sbjct: 61 QQRARRFR-------TALDTEKAREKAIREGVEMPTE---EAFDSNCITPGTAFMAKLTQ 110
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L+Y+I+ +++ D W+ ++V+LS VPGEGEHK+M Y+R + PGYDPN RHCLYGL
Sbjct: 111 QLKYFINKKVSEDIDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGL 170
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DADLIML L +H+ HFS+LRE V T G+Q + K+ E + +
Sbjct: 171 DADLIMLGLLSHDPHFSLLREEV-TFGRQSQT-------------------KSKELEHQN 210
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIVDDFIFMCFFVGNDFL 348
+ +H+ +REYL+ EF+ P F D+E ++DDFI M FFVGNDFL
Sbjct: 211 ---------FYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFL 261
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
P++P L I EGA+ L+ VYK GY+ + ++ R+ + + + E R F+
Sbjct: 262 PNLPHLHINEGALALMFNVYKTVLPKGKGYINEEGVINMERLAILLDELANIEYRHFESE 321
Query: 409 ----ARLHQRHAERIKREKAQARRGDDVEPLAQ 437
A + + K ARRG V Q
Sbjct: 322 NSDAAWFKGKSLGKEDVMKKTARRGTVVMTTQQ 354
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
WK YY+ KF E EE RK + Y +GL WV++YYY GV SW W+Y YHY+P
Sbjct: 475 AWKNDYYKSKFEWDRSNE-EELRK-LTENYVQGLQWVLYYYYRGVASWPWYYQYHYSPMI 532
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD+K + +I+F+LG PFKPF QL+GV P S +P+ Y LMT+ +SPI DFYP DF
Sbjct: 533 SDVKRGLKADINFKLGQPFKPFQQLMGVLPDRSKSIVPKAYWPLMTNEDSPIIDFYPRDF 592
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFI E RLL + E LT +E RNS + F
Sbjct: 593 TLDMNGKKQDWEAVVKIPFIQEDRLLKAMATKEQDLTPDEKARNSFGVSLKFT 645
>gi|326435791|gb|EGD81361.1| hypothetical protein PTSG_11834 [Salpingoeca sp. ATCC 50818]
Length = 1592
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 179/250 (71%), Gaps = 9/250 (3%)
Query: 36 VDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPR 95
++ ++P +G+E+DNLYLDMNGIIHPC HPEDR P T + + + +F+YID +F +VRPR
Sbjct: 308 LEAAQPEHDGIEFDNLYLDMNGIIHPCCHPEDREPPATEEAMMEAIFEYIDHVFTLVRPR 367
Query: 96 KLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV- 154
+LLY+AIDGVAPRAKMNQQR+RRFR++++A D E+ + E +G + PK QV
Sbjct: 368 RLLYLAIDGVAPRAKMNQQRARRFRSAQEAEDRKRVIEKRVEALEADG--VAPKYYYQVT 425
Query: 155 -----FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
FDSN ITPGT FMA L+ L+ YI RL+++ W+ ++VILSDA+VPGEGEHKIM
Sbjct: 426 KKKMSFDSNCITPGTPFMARLAQRLREYIDDRLHSNAAWKDVQVILSDASVPGEGEHKIM 485
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ 269
++R Q++LP YDPN RH LYG DADLIML LATHE HF I+RE F P + C +CG
Sbjct: 486 DFIRQQQSLPSYDPNMRHVLYGADADLIMLGLATHEPHFYIIRE-EFVPPPKKPCPICGF 544
Query: 270 PGHLAANCEG 279
GH C G
Sbjct: 545 RGHALNECTG 554
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 117/192 (60%), Gaps = 12/192 (6%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
G+KE YY +KF ++ +D+ YTEG+CWVM YY++G SW W+Y YHYAPF
Sbjct: 1218 GFKEMYYRKKF--ESAASGATFLRDLATAYTEGVCWVMLYYFQGCPSWSWYYKYHYAPFC 1275
Query: 605 SDLKDLDQFNISFEL---GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
SD LD +S PF+P QL+GVFP ASS LP + KLMT S +S FYP
Sbjct: 1276 SDFAALDMDTVSLPFPDDSTPFRPLEQLMGVFPPASSSFLPARWAKLMTG-KSAVSRFYP 1334
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSH 721
+ F VD+NGK+Y+WQG+ LPF+DE LL + ++ +LT EEA RN+ D+LF
Sbjct: 1335 SSFRVDLNGKKYAWQGVTLLPFMDEDVLLTALDRVYPSLTGEEAHRNAFGHDLLF----- 1389
Query: 722 PLSASIYTLDEH 733
LS S L +H
Sbjct: 1390 -LSKSSQALQDH 1400
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 391
+VDD++ +C VGNDFLPH+P+L I EGAI+ L +Y R+LGG+L D +L R+
Sbjct: 802 MVDDWVLLCCLVGNDFLPHLPSLSIHEGAIDTLTRLYATMQRSLGGFLHDNGHVNLPRLG 861
Query: 392 HFIQAVGSYEDRIFQKR 408
F+ +G+ ED + ++R
Sbjct: 862 MFLARLGTMEDHVIRQR 878
>gi|312085747|ref|XP_003144802.1| hypothetical protein LOAG_09226 [Loa loa]
Length = 1443
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 255/529 (48%), Gaps = 78/529 (14%)
Query: 209 MSYVRLQRNLPGYDPNTRHCLYGLDADL-----IMLALATHEVHFSILREVVFTPGQQDK 263
M ++R +R+ YD NTRHCLYGLDADL IML + +HE HF++LRE V Q+
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLASFLQIMLGICSHEPHFALLREEVKFGRQR-- 58
Query: 264 CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP 323
N GK K E + LH+ LREYL +EF
Sbjct: 59 ------------NHNGKHKTGVNEI------------TFHLLHLSLLREYLSWEFHSLKE 94
Query: 324 --PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD 381
PFE DLE ++DD++ M F VGNDF+PH+P + I E A+ LL A Y + L GY+ +
Sbjct: 95 KLPFEYDLESVIDDWVLMGFLVGNDFIPHLPHVHIHEDALPLLYATYNEVLPQLDGYINE 154
Query: 382 GSKPSLRRVEHFIQAVGSYEDRIFQKR----ARLHQRHAERI--KREKAQARRGDDVEPL 435
+L+R E F++ + + F ++ A L + K Q +D+EP
Sbjct: 155 AGVLNLKRFEIFLKNFAKNDRKNFIEQMDDEAYLSSKRISNAWKKGPNDQQNCDEDLEPF 214
Query: 436 AQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKV--PRLSSGATIG 493
L+ ++ G D+ S ++ PR+ +
Sbjct: 215 D---------------LSDAEKTEITEKDSRKGAFDSDSNASDECEEIAGPRI-----LT 254
Query: 494 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKER---Y 550
AA F D + + A LL D+S + +D + + +K Y
Sbjct: 255 AAKRMTHGYFGLDKDSDNDLPIA----LLDDES--YENDYDQSSWTPVVSRAFKNHKRDY 308
Query: 551 YEEKF---NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 607
Y +K N E RE+ Y + W +HYYY G CSW WFYP+HYAP+ SD+
Sbjct: 309 YNDKMKYSNISKEELREQAEG-----YIRAIQWNLHYYYHGCCSWSWFYPHHYAPYISDV 363
Query: 608 KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 667
D + ++F+L PFKPF QLL V P+AS+ LP YR+LM+DP SPI DFYP F+ D
Sbjct: 364 SDFAEMEMNFDLSEPFKPFEQLLAVLPAASADCLPLPYRELMSDPKSPIIDFYPEQFDTD 423
Query: 668 MNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
+NGK+ W+ + +PFI E RLL + + LT+EE +RN +LF
Sbjct: 424 LNGKKNDWEAVVLIPFIREDRLLQAMAIKDPLLTDEERKRNLHGPHLLF 472
>gi|387592987|gb|EIJ88011.1| hypothetical protein NEQG_01455 [Nematocida parisii ERTm3]
Length = 613
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/437 (37%), Positives = 232/437 (53%), Gaps = 76/437 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RW+A++YP S +G E DNLYLD+NGIIH
Sbjct: 1 MGVPSLFRWIAKRYP----------------------KSINAASGQEVDNLYLDLNGIIH 38
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP +R P + +E+F+ +F +D L +VRP+ LLY+A+DGVAPRAKMNQQR RRFR
Sbjct: 39 PCCHPRNREPPGSEEEMFREIFKTVDHLVSIVRPKHLLYIAVDGVAPRAKMNQQRERRFR 98
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
KD +D E FD N ITPGT FM L A+ YI
Sbjct: 99 P-KDVSDGHVEGG---------------------FDPNTITPGTPFMYRLHCAIIRYIEQ 136
Query: 181 RLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R + GW+++ VI S +VPGEGEHK+ +VR + RH + GLDADLI L
Sbjct: 137 RQSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRSIKG-----TGVRHAICGLDADLIFL 191
Query: 240 ALATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
+LATHE F +LRE VF ++++ C LC + GH NC
Sbjct: 192 SLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGHSTGNCNPNT---------------- 235
Query: 298 PKKPYQFLHIWTLREYLDYEFRIP-NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
PY +L I +R YL +F N F D E I+DD+IF+CFFVGNDFLP +P+++I
Sbjct: 236 -FPPYIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGNDFLPSIPSMDI 292
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+ AI + Y YLT+ SK ++ + + +G E+++ + + + ++A
Sbjct: 293 KVAAIETITTSYINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLLRAKLAGYVKNA 352
Query: 417 ERIKREKAQARRGDDVE 433
+R + +A R +D++
Sbjct: 353 KR----RGEAPREEDLK 365
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 12/239 (5%)
Query: 496 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF 555
I E +T + ++ +AKL +++ + E+ KVKL E + YY K
Sbjct: 323 IAELSVLMDTLGETEEKLLRAKLAGYVKNAKRRGEAPREEDLKVKLYEEKGRLEYYSSKM 382
Query: 556 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLD 611
+A +PE+ + + Y GL W++ YYY+G SW W+YP H+AP A D LK +
Sbjct: 383 HANSPEDI----TNGCVEYLRGLSWILQYYYKGCPSWNWYYPLHFAPLAQDIADTLKKMP 438
Query: 612 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
+ F G KP Q++ V P +S+ ++PE + + + + YP + ++DM GK
Sbjct: 439 HLSFDFSKGAARKPLEQVMAVLPPSSASSIPEGLYPIFNE----MPENYPDEVKIDMFGK 494
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
+WQG+A LPF D +L+ V++ L +E RN D+LF+ ++ A+ TL
Sbjct: 495 TQAWQGVALLPFFDCDKLVSLVREHSRNLPLDEIYRNVEGCDLLFLPTANKNYATAETL 553
>gi|378755557|gb|EHY65583.1| hypothetical protein NERG_01190 [Nematocida sp. 1 ERTm2]
Length = 613
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 222/422 (52%), Gaps = 72/422 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RW+A++YP + V + GV DNLYLD+NGIIH
Sbjct: 1 MGVPSLFRWIAKRYPKSINKVANQ------GV----------------DNLYLDLNGIIH 38
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP + AP + E+FQ +F +D L +VRP++L+Y+A+DGVAPRAKMNQQR RRFR
Sbjct: 39 PCCHPRGKDAPGSEKEMFQEIFRMVDHLVAIVRPKQLMYIAVDGVAPRAKMNQQRERRFR 98
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
KD D E FD N ITPGT FM L A+ YI
Sbjct: 99 P-KDPTDGHVEGG---------------------FDPNTITPGTPFMYRLHTAITRYIEQ 136
Query: 181 RLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R + GW+++ VI S +VPGEGEHKI +VR + RH + GLDADLI L
Sbjct: 137 RQSAGVNGWKQLAVIYSGCDVPGEGEHKIYDFVRSIKG-----SGVRHVICGLDADLIFL 191
Query: 240 ALATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
+LATHE F +LRE VF ++++ C LC + GH NC A
Sbjct: 192 SLATHEQSFRVLREDVFFLEREERSSCQLCKKDGHSTGNCNPNA---------------- 235
Query: 298 PKKPYQFLHIWTLREYLDYEFRIP-NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
PY +L I +R YL +F N F D E I+DD+IF+CFFVGNDFLP +P+++I
Sbjct: 236 -FPPYIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGNDFLPSIPSMDI 292
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+ AI + Y YLT K ++ + ++ +G ED + + + + + A
Sbjct: 293 KVAAIETITGSYLTNLITRRAYLTQDRKINMEELAVLMKTLGEQEDALLRSKLSCYVKAA 352
Query: 417 ER 418
+R
Sbjct: 353 KR 354
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 15/212 (7%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
E+ ++KL E + YY+ K +A TPEE + + Y +GL W++ YYY G SW+W
Sbjct: 362 EDLRIKLFEEKGRNEYYQMKMHASTPEEITNS----CIEYIKGLSWILEYYYNGCPSWEW 417
Query: 595 FYPYHYAPFASDLKD--LDQFNIS--FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
+YP H+AP A D+ + L NIS FE+G KP Q++ V P +SS ++PE +
Sbjct: 418 YYPMHFAPLARDIAETLLSHPNISFEFEVGKARKPLEQVMAVLPQSSSSSIPEGLYPIFK 477
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
D + + YP ++DM GK +WQG+ +PF+D +++ V++ L E+ RN
Sbjct: 478 D----MPENYPETIKIDMFGKTQAWQGVPLIPFLDCDKMVTLVREYSADLPLEDIYRNVE 533
Query: 711 MADMLFVLL---SHPLSASIYTLDEHCKQLKI 739
D+LF+ ++ L S+YT +KI
Sbjct: 534 GQDLLFLPTENKNYTLGESVYTNFSKSAGIKI 565
>gi|221485905|gb|EEE24175.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2042
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 222/420 (52%), Gaps = 96/420 (22%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ FYRWL+E+YPL+ + + TS P E+DNLYLDMNGI+H
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQ--------------TSLP-----EFDNLYLDMNGILH 41
Query: 61 PCFHPEDRPA-PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H T+ D ++ +F +D + V P+K L +A DGVAPRAKMNQQR+RR+
Sbjct: 42 TCSHGNSGGMLHTSEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRY 101
Query: 120 RASKDAADSAAEEERLRQ-EFEREGRKLPPKSDSQV--------FDSNVITPGTEFMAVL 170
RA+KDAA+ A ++E R + +R+ K K + + FDSN I+PGTEFMA
Sbjct: 102 RAAKDAAELARQKEEHRLLKMQRKQDKAAAKQEKNLSAPTPGGHFDSNCISPGTEFMAKF 161
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
L+++ +LN D W+ +KV+LS +VPGEGEHKIM ++R ++ P N RHCLY
Sbjct: 162 FRHLRFFCEKKLNEDARWKDLKVVLSGPDVPGEGEHKIMQFIRCAKSDPHTGRNVRHCLY 221
Query: 231 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 289
GLDADLIML+LA+HE HF +LR EVVF GKA + +
Sbjct: 222 GLDADLIMLSLASHEPHFCLLREEVVF----------------------GKAVSRGPQ-- 257
Query: 290 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEID----------------- 328
D ++ ++ Q LHI LREYL EF PP E D
Sbjct: 258 ---DRMLTKRENLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSETASTSEADAL 314
Query: 329 ------------------LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
E I+DD++ CF VGNDFLPH +I +G ++LLM+ YK+
Sbjct: 315 DTKAAAIALCPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMSCYKE 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 118/233 (50%), Gaps = 21/233 (9%)
Query: 501 NSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF--NAK 558
++ ETD + +K R+KS+ P + L ++E +Y +K +A
Sbjct: 415 DTVETDLLQEWAADSQWMKSKRRNKSEVEEERRPASEDALLA---YRESFYLKKMGMDAS 471
Query: 559 TPEEREETRKDVVLRYTEGLCWVMHYYYEG--VCSWQWFYPYHYAPFASD---------- 606
TPE R++ + + + Y EGL WV++YYY G W WFYP+HYAPF +D
Sbjct: 472 TPEGRKQIDR-LAVDYLEGLQWVLYYYYRGPQYSGWTWFYPHHYAPFMTDVLSCSFFTEG 530
Query: 607 ---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
L DL + I F P+ PF QLL + P S+ LP+ R ++ P + ++P D
Sbjct: 531 VKQLADLRRKEIRFPASKPYAPFMQLLSILPPKSASLLPKALRPILLSPTPELLPYFPDD 590
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
FEVDM G SW G+ LPFIDE L E + LT EE +RN+ ++L
Sbjct: 591 FEVDMEGCTVSWGGVTLLPFIDEMLLHREALPLFSKLTGEEQQRNTRGKNVLL 643
>gi|237835011|ref|XP_002366803.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|211964467|gb|EEA99662.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|221503733|gb|EEE29417.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 2042
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 222/420 (52%), Gaps = 96/420 (22%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ FYRWL+E+YPL+ + + TS P E+DNLYLDMNGI+H
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQ--------------TSLP-----EFDNLYLDMNGILH 41
Query: 61 PCFHPEDRPA-PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H T+ D ++ +F +D + V P+K L +A DGVAPRAKMNQQR+RR+
Sbjct: 42 TCSHGNSGGMLHTSEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRY 101
Query: 120 RASKDAADSAAEEERLRQ-EFEREGRKLPPKSDSQV--------FDSNVITPGTEFMAVL 170
RA+KDAA+ A ++E R + +R+ K K + + FDSN I+PGTEFMA
Sbjct: 102 RAAKDAAELARQKEEHRLLKMQRKQDKAAAKQEKNLSAPTPGGHFDSNCISPGTEFMAKF 161
Query: 171 SIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLY 230
L+++ +LN D W+ +KV+LS +VPGEGEHKIM ++R ++ P N RHCLY
Sbjct: 162 FRHLRFFCEKKLNEDARWKDLKVVLSGPDVPGEGEHKIMQFIRCAKSDPHTGRNVRHCLY 221
Query: 231 GLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD 289
GLDADLIML+LA+HE HF +LR EVVF GKA + +
Sbjct: 222 GLDADLIMLSLASHEPHFCLLREEVVF----------------------GKAVSRGPQ-- 257
Query: 290 EKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP----NPPFEID----------------- 328
D ++ ++ Q LHI LREYL EF PP E D
Sbjct: 258 ---DRMLTKRENLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSETASTSEADAL 314
Query: 329 ------------------LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
E I+DD++ CF VGNDFLPH +I +G ++LLM+ YK+
Sbjct: 315 DTKAAAIALCPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMSCYKE 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 118/233 (50%), Gaps = 21/233 (9%)
Query: 501 NSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF--NAK 558
++ ETD + +K R+KS+ P + L ++E +Y +K +A
Sbjct: 415 DTVETDLLQEWAADSQWMKSKRRNKSEVEEERRPASEDALLA---YRESFYLKKMGMDAS 471
Query: 559 TPEEREETRKDVVLRYTEGLCWVMHYYYEG--VCSWQWFYPYHYAPFASD---------- 606
TPE R++ + + + Y EGL WV++YYY G W WFYP+HYAPF +D
Sbjct: 472 TPEGRKQIDR-LAVDYLEGLQWVLYYYYRGPQYSGWTWFYPHHYAPFMTDVLSCSFFTEG 530
Query: 607 ---LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
L DL + I F P+ PF QLL + P S+ LP+ R ++ P + ++P D
Sbjct: 531 VKQLADLRRKEIRFPASKPYAPFMQLLSILPPKSASLLPKALRPILLSPTPELLPYFPDD 590
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
FEVDM G SW G+ LPFIDE L E + LT EE +RN+ ++L
Sbjct: 591 FEVDMEGCTVSWGGVTLLPFIDEILLHREALPLFSKLTGEEQQRNTRGKNVLL 643
>gi|444520441|gb|ELV12993.1| 5'-3' exoribonuclease 2 [Tupaia chinensis]
Length = 669
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 182/478 (38%), Positives = 259/478 (54%), Gaps = 46/478 (9%)
Query: 289 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 348
DE D + + + FL + LREYL+ E + + PF D+E +DD++FMCFFVGNDFL
Sbjct: 69 DELADSLPSAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFL 128
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKR 408
PH+P+LEIREGAI+ L+ +YK GGYLT+ +L+RV+ + AVG ED IF+KR
Sbjct: 129 PHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKR 188
Query: 409 ARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASG--PSPSPYQQSEC 466
R K ++ + +R +P P ++ GSR + G + +P Q +
Sbjct: 189 KDDEDSFRRRQKEKRKRMKRD---QPAFTPGGIL-TPHALGSRNSPGCQVANNPRQAAYE 244
Query: 467 VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENS-FETDPQENKEEFKAKLKELLRDK 525
+ +N + S + +G +A++S E +P++N ++A K+ R
Sbjct: 245 MRMQNNSSPSVSPNVSFSSDGSPSPLGGIKRKADDSDSEPEPEDNVRLWEAGWKQ--RYY 302
Query: 526 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 585
+ F+ D +EKF K + E VLRY Y
Sbjct: 303 KNKFDVDAA-----------------DEKFRRKVVQSYVEGLC-WVLRY----------Y 334
Query: 586 YEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEH 644
Y+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS + LP
Sbjct: 335 YQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPS 394
Query: 645 YRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ LT EE
Sbjct: 395 WRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 454
Query: 705 ARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
RRNS+ D+LFV HPL I L Q E V+V PEL G+ G S
Sbjct: 455 TRRNSLGGDVLFVGKHHPLHDFISEL----YQTGSTEPVDVP----PELCHGIQGKFS 504
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 127 DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDP 186
++A E++R+R+E +G LPP+ + FDSN ITPGTEFM L+ L+YYI RLNNDP
Sbjct: 2 EAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDP 61
Query: 187 GWEKIKVI-LSDANVPGEGE 205
GW+ + L+D+ EGE
Sbjct: 62 GWKNLTHDELADSLPSAEGE 81
>gi|164655455|ref|XP_001728857.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
gi|159102743|gb|EDP41643.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
Length = 1426
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 209/360 (58%), Gaps = 45/360 (12%)
Query: 75 DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEER 134
+++F +F YI+ LF +RPRK+ ++AIDGVAPRAKMNQQRSRRFR +++A ++
Sbjct: 4 EDIFLGIFAYIEHLFSKIRPRKVFFLAIDGVAPRAKMNQQRSRRFRTAQEAKENV----- 58
Query: 135 LRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVI 194
++ R G +LP +S FDSN ITPGT FM LS L+Y++ +++ D W ++VI
Sbjct: 59 --EKAIRRGEELP---ESPPFDSNCITPGTSFMRKLSQQLEYFVAKKVSEDSDWRGVEVI 113
Query: 195 LSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE- 253
LS GEGEHKIM ++R + PGY+PNTRHCLYGLDADLIML L +H+ HF++LRE
Sbjct: 114 LSGHEACGEGEHKIMEFIRTIKAQPGYNPNTRHCLYGLDADLIMLGLLSHDPHFALLREQ 173
Query: 254 VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREY 313
V F P +A+R G V + + LHI LREY
Sbjct: 174 VTFGP--------------------RRARRSVG----------VESQTFYLLHISLLREY 203
Query: 314 LDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKE 371
L+ EF PF DLE I+DD+I + FVGNDFLPH+P L+I +GAI LL VY+K
Sbjct: 204 LELEFASLRDKLPFAFDLEKIIDDYILLHLFVGNDFLPHLPGLQINDGAIELLFRVYEKV 263
Query: 372 FRALGGYLTDGSKPSLRRVEHFIQAVGSYE-DR-IFQKRARLHQRHAERIKREKAQARRG 429
GGYL + R++ I + E DR + Q +L Q+ R RE R G
Sbjct: 264 LPQAGGYLNEQGVLRPERLQLVINQLFQLERDRFVHQHMPQLEQKTKARRTRELKNYRVG 323
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK YY K K + + +D+V Y EG+ WV++YYYEG SW WFY YHYAP S
Sbjct: 485 WKADYYHTKMGIKYNDP--DAIQDIVYNYIEGMQWVLYYYYEGNASWGWFYRYHYAPQVS 542
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
DLK++ F F G PF PF QL+GV P S +P ++ LMTDP+SPI DFYPT +E
Sbjct: 543 DLKNISDFTFQFNKGRPFLPFEQLMGVLPPLSKDLIPPAFQPLMTDPSSPILDFYPTKYE 602
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DMNGK+ SW+ + K+PFIDE RLL ++ E LT EE +RN++ + F
Sbjct: 603 SDMNGKKNSWEAVVKIPFIDEERLLHALQLREGGLTAEERQRNTLGVPLRF 653
>gi|340508935|gb|EGR34531.1| hypothetical protein IMG5_008400 [Ichthyophthirius multifiliis]
Length = 263
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 187/274 (68%), Gaps = 17/274 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL + P + D E + S+P+ N E NLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLCSRNPQFILDAFENYE----------NFSEPS-NNPEIHNLYLDMNGIIH 49
Query: 61 PCFHPEDR--PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC + P P T ++F +F YID+L + RP+++LYMAIDGVAPRAKMNQQR+RR
Sbjct: 50 PCCRSDGSAMPIPNTIQDMFNNIFMYIDKLMDICRPQRILYMAIDGVAPRAKMNQQRARR 109
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV---FDSNVITPGTEFMAVLSIALQ 175
F+ +K+A + ++ + E ++G +P + V FD+NVITPGT+FM LSIALQ
Sbjct: 110 FKGAKEAVELQKKKLEIINEQRQQGEDIPEEVMRFVESKFDTNVITPGTQFMRDLSIALQ 169
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
+Y+ R+NN P W+ +KV+ SDA++PGEGEHKI++++R+QR+ YDPN++HCLYG DAD
Sbjct: 170 HYVLDRVNNHPLWKNLKVVFSDASIPGEGEHKILNFIRIQRSQDQYDPNSKHCLYGADAD 229
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQ 269
L+ML L+THE +F I+RE + + + +C +CGQ
Sbjct: 230 LLMLGLSTHEPYFYIIREQIIS-NDEKRCSVCGQ 262
>gi|402582266|gb|EJW76212.1| hypothetical protein WUBG_12878 [Wuchereria bancrofti]
Length = 410
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 220/398 (55%), Gaps = 29/398 (7%)
Query: 190 KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFS 249
K KVILSDANVPGEGEHKIM ++R QR P +DPNT HCL G DADLIML LATHE +F+
Sbjct: 3 KFKVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLGLATHEPNFN 62
Query: 250 ILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWT 309
I+RE F P QQ C LCGQ GH +C+G A + + E + + + F+ +
Sbjct: 63 IIREE-FVPNQQRPCDLCGQYGHDLNDCKGLA---SDDNSECQSSPLQKETNFIFIRLPV 118
Query: 310 LREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 369
LREYL+ E IPN DLE +DD++FMCFFVGNDFLPH+P+LEIRE AI+ L+ +YK
Sbjct: 119 LREYLERELHIPNCSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVKLYK 178
Query: 370 KEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRG 429
+ G+LTD + RV+ + +G ED IF+ R Q+ R K +K + R
Sbjct: 179 DMVCEMKGHLTDSGIVHIERVQIILDKLGEVEDEIFKSRQEREQQFKRRNKEKKWRER-- 236
Query: 430 DDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSG 489
A P S +P + G SP N + + R ++ L
Sbjct: 237 ----TFATP-SYIP---------SRGSLLSPQTNGPMYLSGSNTRAMA-RTARLEALDFT 281
Query: 490 ATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKER 549
T+ + +N+ P N E + +EL + S S++ D+V+L E GWK+R
Sbjct: 282 GTVHTRTM--DNTAFHVPAINISENNDRKQELKNNSS----SEDEAFDEVRLWEDGWKDR 335
Query: 550 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 587
YY+ KF + R+ V L Y EGLCWV+HYYY+
Sbjct: 336 YYKSKFQVDGKD--IVFRRKVALAYVEGLCWVLHYYYQ 371
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 30/31 (96%)
Query: 81 MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
+F+YIDRLF +VRPRKLLYMAIDGVAPRAK+
Sbjct: 374 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 404
>gi|330040606|ref|XP_003239969.1| dhm exonuclease [Cryptomonas paramecium]
gi|327206895|gb|AEA39071.1| dhm exonuclease [Cryptomonas paramecium]
Length = 541
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 232/425 (54%), Gaps = 65/425 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YPLV +I + ++D YLDMNGI+H
Sbjct: 1 MGVPKFFRWISERYPLVNQKIINQN---------------------DFDCFYLDMNGIVH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
CF + +P +FQ +F Y + LF +V+P+KL++MA DGV+PRAKMNQQRSRRFR
Sbjct: 40 SCF--QKFSSPYREKNIFQEIFFYTEYLFRIVKPKKLIFMAFDGVSPRAKMNQQRSRRFR 97
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+E ++Q K S+ +VFDSN ITPGTEFM LS + ++
Sbjct: 98 T---------KETNMKQN------KNFTHSNEEVFDSNCITPGTEFMKRLSFFFKKWLKN 142
Query: 181 RLNNDPGWEK-IKVILSDANVPGEGEHKIMSYVR-LQRNLPGYDPNT-RHCLYGLDADLI 237
++ D W++ VI S + VPGEGEHKIM+Y+R +Q+ Y +T +HCLYGLDADLI
Sbjct: 143 KVKFDSEWKQGCDVIFSSSEVPGEGEHKIMNYIRKIQKVYFQYKKSTLKHCLYGLDADLI 202
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +HE +F++LRE +F G N E + ++
Sbjct: 203 MLGLLSHEKNFTLLREKIF------------HRGTTTFNKETCLDKNLN---------LL 241
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPP--FEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
+ + L I LR+ + EF+ P F+ D+E I+DDFIFMC +GNDF+P +P L
Sbjct: 242 MSEEFHLLEISLLRDMIFLEFK-PKKTILFKYDVERIIDDFIFMCMLLGNDFIPGLPHLN 300
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRH 415
I +G +NLL+ YK+ + L GYLT + R E F + + S + +F R + +
Sbjct: 301 ITQGGLNLLVRSYKEIQQKLDGYLTKKHQIHFGRAELFFRKISSEAESLFFFRRKQEKTG 360
Query: 416 AERIK 420
E K
Sbjct: 361 NETYK 365
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Query: 540 KLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYH 599
K G +K YY KF T + +++ Y GL W + YY++ SW WFYP +
Sbjct: 358 KTGNETYKSSYYLSKFKF-TYQIEHGFLSNLIKNYIHGLHWCLFYYHKKCPSWNWFYPEY 416
Query: 600 YAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
Y+P SDL +L F I F G PF P QLL V P SS LP + LM + SP+ F
Sbjct: 417 YSPLCSDLVNLCPFEIFFTKGRPFSPLIQLLAVLPPRSSVFLPSSFANLMLNEKSPVKCF 476
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEEARRNSIMADMLFV 717
YP ++++D+NGK+ W+GI LPFIDE +LLD +K + L+ +E RNS D++F
Sbjct: 477 YPYEYKIDLNGKKNVWEGIVLLPFIDENKLLDAIKMFIKKEQLSIQEKERNSFARDIVFT 536
>gi|387596301|gb|EIJ93923.1| hypothetical protein NEPG_01495 [Nematocida parisii ERTm1]
Length = 613
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 231/437 (52%), Gaps = 76/437 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RW+A++YP S +G E DNLYLD+NGIIH
Sbjct: 1 MGVPSLFRWIAKRYP----------------------KSINAASGQEVDNLYLDLNGIIH 38
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP +R P + +E+F+ +F +D L +VRP+ LLY+A+DGVAPRAKMNQQR RRFR
Sbjct: 39 PCCHPRNREPPGSEEEMFREIFKTVDHLVSIVRPKHLLYIAVDGVAPRAKMNQQRERRFR 98
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
KD +D E FD N ITPGT FM L A+ YI
Sbjct: 99 P-KDVSDGHVEGG---------------------FDPNTITPGTPFMYRLHCAIIRYIEQ 136
Query: 181 RLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
R + GW+++ VI S +VPGEGEHK+ +VR + RH + GLDADLI L
Sbjct: 137 RQSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRSIKG-----TGVRHAICGLDADLIFL 191
Query: 240 ALATHEVHFSILREVVFTPGQQDK--CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
+LATHE F +LRE VF ++++ C LC + GH NC
Sbjct: 192 SLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGHSTGNCNPNT---------------- 235
Query: 298 PKKPYQFLHIWTLREYLDYEFRIP-NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
PY +L I +R YL +F N F D E I+DD+IF+CFFVGNDFLP +P+++I
Sbjct: 236 -FPPYIYLDIDIIRRYLYTDFSTAINARF--DFERILDDWIFVCFFVGNDFLPSIPSMDI 292
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+ AI + YLT+ SK ++ + + +G E+++ + + + ++A
Sbjct: 293 KVAAIETITTSCINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLLRAKLAGYVKNA 352
Query: 417 ERIKREKAQARRGDDVE 433
+R + +A R +D++
Sbjct: 353 KR----RGEAPREEDLK 365
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 123/239 (51%), Gaps = 12/239 (5%)
Query: 496 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF 555
I E +T + ++ +AKL +++ + E+ KVKL E + YY K
Sbjct: 323 IAELSVLMDTLGETEEKLLRAKLAGYVKNAKRRGEAPREEDLKVKLYEEKGRLEYYSSKI 382
Query: 556 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD----LKDLD 611
+A +PE+ +V + Y GL W++ YYY+G SW W+YP H+AP A D LK +
Sbjct: 383 HANSPEDI----TNVCVEYLRGLSWILQYYYKGCPSWNWYYPLHFAPLAQDIADTLKKMP 438
Query: 612 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
+ F G KP Q++ V P +S+ ++PE + + + + YP + ++DM GK
Sbjct: 439 HLSFDFSKGAARKPLEQVMAVLPPSSASSIPEGLYPIFNE----MPENYPDEVKIDMFGK 494
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
+WQG+A LPF D +L+ V++ L +E RN D+LF+ ++ A+ TL
Sbjct: 495 TQAWQGVALLPFFDCDKLVSLVREHSRNLPLDEIYRNVEGCDLLFLPTANKNYATAETL 553
>gi|71747618|ref|XP_822864.1| 5'-3' exoribonuclease XRND [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832532|gb|EAN78036.1| 5'-3' exoribonuclease XRND, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 801
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 228/419 (54%), Gaps = 46/419 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ FY WL Y + DV + V++ K ++DNLYLD+NG++H
Sbjct: 1 MGIAGFYLWLKRWYASCMEDVPQ---CVVEAASKSSPPPKEYMQSHKFDNLYLDLNGLVH 57
Query: 61 PCFH-PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC H P P + +E+F+ +F ID +F +VRPRK L + +DGVAP++KMNQQRSRRF
Sbjct: 58 PCCHDTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGVAPQSKMNQQRSRRF 117
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+++ A+ + +G LP + +D NVITP T FM L +A+++++
Sbjct: 118 RAAEERAEGEVMSAKCADVLLEKG--LPYPKVRERWDHNVITPSTPFMERLGLAIEWFVV 175
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++N DP W+K+ V+ SDA+VPGEGEHKIM Y+R R PGYDP+T H +YG+DADLI L
Sbjct: 176 KKVNEDPLWKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIYGMDADLISL 235
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L+THE +ILR Q ++ F GK
Sbjct: 236 GLSTHEKSVTILR------NQLNETFNAAH---------GK------------------- 261
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ + + RE L +F + E+ E +VDDFIF+CFFVGNDFLPH+P + I+
Sbjct: 262 --FCYFSLVKFRECLKRDF---DGIKEMSFERVVDDFIFLCFFVGNDFLPHVPLISIKTR 316
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
+ LL+ Y EF A YLTDG + + + F+ + + + + +R ER
Sbjct: 317 GVELLLDHYVNEF-ASHSYLTDGGEVRFKALSSFLARFLNDYGSVLRDESSFGERAKER 374
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 513 EFKAKLKELLRDKSDAFN-SDNPEE--------------DKVKLG----EPGWKERYYEE 553
E K L + RDK++A SD + DK LG + ++++YY++
Sbjct: 389 ELKKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFTYHDEDYRDKYYQK 448
Query: 554 KFNAKTPEEREETRKDV---VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
KF PE+R + K V Y G WVM YY G SW WFYPYHYAP DL
Sbjct: 449 KFGWD-PEKRSKFEKRVKRCCAEYLRGTQWVMRYYTSGCPSWNWFYPYHYAPLLDDLARF 507
Query: 611 -DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
D ++ FE G P P QLL V P S LP + DPNS FYP +VD +
Sbjct: 508 TDSVDVEFERGTPRHPVVQLLAVLPRMSVGGLPVELHGAVLDPNSVFGPFYPDHVDVDYS 567
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 702
+++QG+ +LPFID E++ +TL E
Sbjct: 568 EAIFAYQGVLRLPFID----CKEIEAACNTLVE 596
>gi|261332676|emb|CBH15671.1| 5'-3' exoribonuclease 2, putative [Trypanosoma brucei gambiense
DAL972]
Length = 801
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 228/419 (54%), Gaps = 46/419 (10%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ FY WL Y + DV + V++ K ++DNLYLD+NG++H
Sbjct: 1 MGIAGFYLWLKRWYASCMEDVPQ---CVVEAASKSSPPPKEYMQSHKFDNLYLDLNGLVH 57
Query: 61 PCFH-PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC H P P + +E+F+ +F ID +F +VRPRK L + +DGVAP++KMNQQRSRRF
Sbjct: 58 PCCHDTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGVAPQSKMNQQRSRRF 117
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+++ A+ + +G LP + +D NVITP T FM L +A+++++
Sbjct: 118 RAAEERAEGEVMSAKCADVLLEKG--LPYPKVRERWDHNVITPSTPFMERLGLAIEWFVV 175
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++N DP W+K+ V+ SDA+VPGEGEHKIM Y+R R PGYDP+T H +YG+DADLI L
Sbjct: 176 KKVNEDPLWKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIYGMDADLISL 235
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
L+THE +ILR Q ++ F GK
Sbjct: 236 GLSTHEKSVTILR------NQLNETFNAAH---------GK------------------- 261
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ + + RE L +F + E+ E +VDDFIF+CFFVGNDFLPH+P + I+
Sbjct: 262 --FCYFSLVKFRECLKRDF---DGIKEMSFERVVDDFIFLCFFVGNDFLPHVPLISIKTR 316
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAER 418
+ LL+ Y EF A YLTDG + + + F+ + + + + +R ER
Sbjct: 317 GVELLLDHYVNEF-ASHSYLTDGGEVRFKALSSFLARFLNDYGSVLRDESSFGERAKER 374
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 513 EFKAKLKELLRDKSDAFN-SDNPEE--------------DKVKLG----EPGWKERYYEE 553
E K L + RDK++A SD + DK LG + ++++YY++
Sbjct: 389 ELKKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFTYHDEDYRDKYYQK 448
Query: 554 KFNAKTPEEREETRKDV---VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
KF PE+R + K V Y G WVM YY G SW WFYPYHYAP DL
Sbjct: 449 KFGWD-PEKRSKFEKRVKRCCAEYLRGTQWVMRYYTSGCPSWNWFYPYHYAPLLDDLARF 507
Query: 611 -DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
D ++ FE G P P QLL V P S LP + DPNS FYP +VD +
Sbjct: 508 TDSVDVEFERGTPRHPVVQLLAVLPRMSVGGLPVELHGAVLDPNSVFGPFYPDHVDVDYS 567
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTE 702
+++QG+ +LPFID E++ TL E
Sbjct: 568 EAIFAYQGVLRLPFID----CKEIEAACDTLVE 596
>gi|241602466|ref|XP_002405190.1| pacman protein, putative [Ixodes scapularis]
gi|215500574|gb|EEC10068.1| pacman protein, putative [Ixodes scapularis]
Length = 1112
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 205/342 (59%), Gaps = 44/342 (12%)
Query: 91 MVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS 150
M++PRK +MA+DGVAPRAKMNQQR RRFR++K+A A E++ L + G LP ++
Sbjct: 1 MIKPRKTFFMAVDGVAPRAKMNQQRGRRFRSAKEAL--ALEKQALSR-----GEVLPTEA 53
Query: 151 DSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMS 210
FDSN I+PGT FMA L L+ ++ +++++DP W+++KV LS PGEGEHKIM
Sbjct: 54 R---FDSNCISPGTSFMANLQEQLEQFVAMKISSDPLWQEVKVYLSGHQTPGEGEHKIMD 110
Query: 211 YVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQP 270
++R +R+ PGYDPNTRHCLYGLDADLIML +HE HF++LRE + +Q++
Sbjct: 111 FIRTERSKPGYDPNTRHCLYGLDADLIMLGTCSHEPHFALLREEIVYGKKQNQ------- 163
Query: 271 GHLAANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEI 327
KR + VP++ + LH+ LREYL YEF+ + PFE
Sbjct: 164 -----------KR-----------LNVPEEITFHLLHLSLLREYLSYEFQAVKDSLPFEF 201
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 387
LE +VDD++ MCF VGNDFLPH+P L I A+ +L Y + LGGY+ + +L
Sbjct: 202 SLESLVDDWVLMCFLVGNDFLPHLPNLHIAHNALPILYQAYIEVLPTLGGYINEQGTLNL 261
Query: 388 RRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRG 429
R E F++ + ++ F + Q+ E KR A A G
Sbjct: 262 ERFEKFLKRLSQFDYEKFTD-VQADQKFLES-KRTAATAPNG 301
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 117/197 (59%), Gaps = 2/197 (1%)
Query: 529 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 588
+ SD E +++ K YY K K + +E ++ Y + W +HYYY G
Sbjct: 343 YESDEESEGTLEMEFRQHKRDYYTTKLEYK--DVNKEVMQEQAHGYVRAIQWNLHYYYNG 400
Query: 589 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 648
V SW W+YP+HY+P+ SD+KD ++SFELG PF PF QL+ + P+AS +P+ Y+ L
Sbjct: 401 VQSWNWYYPHHYSPYISDIKDFQSIDMSFELGKPFLPFQQLMSILPAASKGLVPKAYQAL 460
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
M SP+ D+YP DF D+NGK+ W+ + +PFIDE RLL +++++ LT+EE RN
Sbjct: 461 MEGEESPVLDYYPQDFTTDLNGKQQEWEAVVLIPFIDEDRLLPVMQELDSKLTDEERERN 520
Query: 709 SIMADMLFVLLSHPLSA 725
+ +LF P+++
Sbjct: 521 THGGHLLFTYSHEPVTS 537
>gi|401405148|ref|XP_003882024.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
gi|325116438|emb|CBZ51991.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
Length = 2070
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 219/417 (52%), Gaps = 93/417 (22%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ FYRWL+E+YPL+ + + +P E+DNLYLDMNGI+H
Sbjct: 1 MGIGRFYRWLSERYPLINEKITQ--------ASLP-----------EFDNLYLDMNGILH 41
Query: 61 PCFHPEDRPA-PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H + D ++ +F +D + V P+K L +A DGVAPRAKMNQQR+RR+
Sbjct: 42 TCSHGNSGGMLHESEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRY 101
Query: 120 RASKDAADSAAEEERLRQ-EFEREGRKLPPKS--DSQVFDSNVITPGTEFMAVLSIALQY 176
RA+KDAA+ A ++E R + +R+ K P+S FDSN I+PGTEFMA L++
Sbjct: 102 RAAKDAAELARQKEEHRLLKMQRKQDKSAPQSPPSGGHFDSNCISPGTEFMAKFFRHLRF 161
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+ +LN D W+ +KV+LS +VPGEGEHKIM ++R ++ P N RHCLYGLDADL
Sbjct: 162 FCEKKLNEDARWKHLKVVLSGPDVPGEGEHKIMQFIRCSKSDPHSGRNVRHCLYGLDADL 221
Query: 237 IMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
IML+LA+HE HF +LRE VVF GKA K + D +
Sbjct: 222 IMLSLASHEPHFCLLREEVVF----------------------GKAVTKGPQ-----DRL 254
Query: 296 VVPKKPYQFLHIWTLREYLDYEF------------------------------------R 319
+ ++ Q LHI LREYL EF
Sbjct: 255 LTKRENLQLLHISLLREYLFLEFAAVALRAAPALKSSSNEKEQPSRADGAAPAEIVFDAS 314
Query: 320 IPNPPFEIDL------ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
+ +P L E I+DD++ CF VGNDFLPH +I +G ++LLM YK+
Sbjct: 315 LGSPSLRPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMTCYKE 371
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 18/189 (9%)
Query: 545 GWKERYYEEKF--NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG--VCSWQWFYPYHY 600
+++ +Y +K + TPE R++ + + + Y EGL WV++YY+ G W WFYP+HY
Sbjct: 454 AYRQAFYLKKMGMDGHTPEGRKQIDR-LAVDYLEGLQWVLYYYFRGPHYSGWDWFYPHHY 512
Query: 601 APFASD-------------LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 647
APF +D L DL + I F P+ PF QLL + P S+ LP+ R+
Sbjct: 513 APFMTDVLCCSFFTEGVKDLADLRRKEIRFPASKPYAPFMQLLSILPPKSASLLPKALRQ 572
Query: 648 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 707
++ P+ + ++PTDFEVDM G W G+ LPFI+E L E + LT EEARR
Sbjct: 573 ILLSPSLELLPYFPTDFEVDMEGCTVPWGGVTLLPFIEEKLLYKEALPLFSKLTGEEARR 632
Query: 708 NSIMADMLF 716
N+ ++L
Sbjct: 633 NTRGKNVLL 641
>gi|401420072|ref|XP_003874525.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490761|emb|CBZ26025.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 893
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 208/387 (53%), Gaps = 57/387 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV-VIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+ F+ WL Y D I+ P V+D + + YDN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWY----GDCIDNIPQDVVDAAFKGQALPHSHASAYSYDNFYVDMNGLI 56
Query: 60 HPCFHPEDRPAPTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
HPC H +E MFD +D L +VRP+K L + +DGVAPR+KMNQQRSRR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRR 116
Query: 119 FRASKDA----ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
FRA+ + A S A +R+ E+ LP + +D NVITP T FM +++AL
Sbjct: 117 FRAADERLESDAISNACADRIVSEYH-----LPRPRVRERWDHNVITPSTAFMERVALAL 171
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
++YI +LN D GW + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT H ++G+DA
Sbjct: 172 EWYIMKKLNEDAGWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMDA 231
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLI L L+THE H ILR + Q D C
Sbjct: 232 DLICLGLSTHEKHVCILRNQLTETFQPDHNRFC--------------------------- 264
Query: 295 VVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ ++ T RE L +F I FE +VDDFIF+CFFVGNDFLPH+P
Sbjct: 265 ---------YFNLSTYREKLMQDFANIEGMQFER----VVDDFIFLCFFVGNDFLPHVPL 311
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLT 380
+ I+ I +L+ Y ++F AL GYLT
Sbjct: 312 VSIKTRGIEMLLDHYVRDF-ALHGYLT 337
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 537 DKVKLG----EPGWKERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGV 589
DK LG + +++ YY+ KF R + + L Y G+ WVM YY +G
Sbjct: 429 DKQPLGFSYLDKTYRDAYYQHKFGWDPSTNRAAFERQIRLCCAEYLRGMQWVMRYYTKGC 488
Query: 590 CSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 648
SW+W++PYHYAP DL N+ + P P QLL V P S HALPE +
Sbjct: 489 PSWEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEA 548
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
+ DP S + FYP VD + +S+QG+ ++PFI+
Sbjct: 549 VNDPKSVLGKFYPAIVNVDFSEANFSYQGVLRIPFIN 585
>gi|407409729|gb|EKF32447.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 807
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 225/430 (52%), Gaps = 56/430 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEE-PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+ FY WL Y V DV EE ++G +PV + +DN YLDMNG+I
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALNGQPLPVSSDATQ----RFDNFYLDMNGLI 56
Query: 60 HPCFHPEDRPAPTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
HPC H +E +F +D L+ +VRPRK L + IDGVAP++KMNQQRSRR
Sbjct: 57 HPCCHDTAPLPEPETEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRSRR 116
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+++ + + ++ ++G LPP +D NVITP T FM + +A++++I
Sbjct: 117 FRAAEERIEGEVFSAQCAEDVVKKG--LPPPQTRSRWDHNVITPSTPFMERVGLAIEWFI 174
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++N DP W I VI SDA+VPGEGEHKIM Y+R R GY+P T H ++G+DADLI
Sbjct: 175 MKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRVQLGYNPQTSHVIHGMDADLIC 234
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+THE H +ILR + Q D C
Sbjct: 235 LGLSTHEEHVTILRNQLTETFQPDHNRFC------------------------------- 263
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
Y L+ + LR D+ ++D E ++DDF+F+CFFVGNDFLPH+P + I+
Sbjct: 264 ---YFSLYKYRLRLRDDF-----GGIGQMDFERVLDDFVFLCFFVGNDFLPHVPLISIKT 315
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ--AVGSYEDR------IFQKRAR 410
I LL+ Y + F+ YLT G + + + F++ VG E + + + R
Sbjct: 316 KGIELLLDHYVRGFKD-HSYLTHGGEVNYGNLTKFLRFFVVGYMEKLKQEYGGVLRAKQR 374
Query: 411 LHQRHAERIK 420
+ ER+K
Sbjct: 375 AKAKVEERVK 384
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 5/154 (3%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 603
+++YYE+KF P +RE K + L Y G WVM YY G SW W+YP++YAP
Sbjct: 442 RDKYYEKKFGW-DPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPL 500
Query: 604 ASDLKDL-DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
DL + N+ LG P P QLL V P S ALPE + DP+S + FYP
Sbjct: 501 LQDLAHFPGKVNVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPDSVLGVFYPE 560
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
+VD + +S+QG+ +LPF++ + L +K+
Sbjct: 561 KVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 594
>gi|398024282|ref|XP_003865302.1| exoribonuclease 2, putative [Leishmania donovani]
gi|322503539|emb|CBZ38625.1| exoribonuclease 2, putative [Leishmania donovani]
Length = 879
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 207/387 (53%), Gaps = 57/387 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV-VIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+ F+ WL Y D I+ P V+D + + YDN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWY----GDCIDNIPQDVVDAAFKGQTLPHSHASAYSYDNFYVDMNGLI 56
Query: 60 HPCFHPEDRPAPTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
HPC H +E MFD +D L +VRP+K L + +DGVAPR+KMNQQRSRR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRR 116
Query: 119 FRASKDA----ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
FRA+ + A S A +R+ E+ LP + +D NVITP T FM +++AL
Sbjct: 117 FRAADERLESDAISNACADRIVSEYH-----LPRPRVRERWDHNVITPSTAFMERVALAL 171
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
++YI +LN D W + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT H ++G+DA
Sbjct: 172 EWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMDA 231
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLI L L+THE H ILR + Q D C
Sbjct: 232 DLICLGLSTHEKHVCILRNQLTETFQPDHNRFC--------------------------- 264
Query: 295 VVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ ++ T RE L +F I FE +VDDFIF+CFFVGNDFLPH+P
Sbjct: 265 ---------YFNLSTYREKLMQDFSNIEGMQFER----VVDDFIFLCFFVGNDFLPHVPL 311
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLT 380
+ I+ I +L+ Y ++F AL GYLT
Sbjct: 312 VSIKTRGIEMLLDHYVRDF-ALHGYLT 337
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 537 DKVKLG----EPGWKERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGV 589
DK LG + +++ YY+ KF R + L Y GL WVM YY +G
Sbjct: 429 DKQPLGFSYLDKAYRDAYYQHKFGWDPSANRAAFESHIRLCCAEYLRGLQWVMRYYTKGC 488
Query: 590 CSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 648
SW+W++PYHYAP DL N+ + P P QLL V P S HALPE +
Sbjct: 489 PSWEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEA 548
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
+ DP S + FYP +VD + +S+QG+ ++PFI+
Sbjct: 549 VNDPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFIN 585
>gi|154345762|ref|XP_001568818.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066160|emb|CAM43950.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 899
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 226/440 (51%), Gaps = 63/440 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ F+ WL Y V +V ++ V+D + + + YDN Y+DMNG+IH
Sbjct: 1 MGIAGFFLWLQRWYGDCVDNVPQD---VVDAAFKGQALPRSHASAYSYDNFYVDMNGLIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC H +E MFD +D L +VRP+K L + IDGVAPR+KMNQQRSRRF
Sbjct: 58 PCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCIDGVAPRSKMNQQRSRRF 117
Query: 120 RASKDA----ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
RA+ + A S A +R+ E+ LP + +D NVITP T FM +++AL+
Sbjct: 118 RAADERLESDAISNACADRIVSEYS-----LPRPRVRERWDHNVITPSTAFMERVALALE 172
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
+YI +LN D W + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT H ++G+DAD
Sbjct: 173 WYIMKKLNEDAEWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTTHVIHGMDAD 232
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LI L L+THE H ILR + Q D C
Sbjct: 233 LICLGLSTHEKHVCILRNQLTETFQPDHNRFC---------------------------- 264
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
Y L ++ ++ D+ I FE +VDDFIF+CFFVGNDFLPH+P +
Sbjct: 265 ------YFNLQMYRMKLMKDFA-NIEGMQFER----VVDDFIFLCFFVGNDFLPHVPLVS 313
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS---------YEDRIFQ 406
I+ I LL+ Y ++F AL GYLT + + F+ S Y I +
Sbjct: 314 IKTRGIELLLDHYVRDF-ALHGYLTHLGEVDYAHLHIFLMNFASKCMIKLTKEYYG-IVR 371
Query: 407 KRARLHQRHAERIKREKAQA 426
R R Q ERI + +AQ
Sbjct: 372 ARERAKQHVEERITKTEAQV 391
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
+++ YY++KF R + L Y G+ WVM YY +G SW+W++PYHYAP
Sbjct: 442 YRDAYYQQKFGWDHSINRAAFENQIRLCCAEYLRGMQWVMRYYTKGCPSWEWYFPYHYAP 501
Query: 603 FASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYP 661
DL N+ + P P QLL V P S HALPE + + DP S + FYP
Sbjct: 502 LLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEAVNDPKSLLGKFYP 561
Query: 662 TDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
+VD + +S+QG+ ++PFI+ L +K+
Sbjct: 562 DMVDVDFSEANFSYQGVLRIPFINCEALSRACRKL 596
>gi|146104232|ref|XP_001469769.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
gi|134074139|emb|CAM72881.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
Length = 879
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 207/387 (53%), Gaps = 57/387 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPV-VIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+ F+ WL Y D I+ P V+D + + YDN Y+DMNG+I
Sbjct: 1 MGIAGFFLWLQRWY----GDCIDNIPQDVVDAAFKGQTLPHSHASAYSYDNFYVDMNGLI 56
Query: 60 HPCFHPEDRPAPTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
HPC H +E MFD +D L +VRP+K L + +DGVAPR+KMNQQRSRR
Sbjct: 57 HPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQRSRR 116
Query: 119 FRASKDA----ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
FRA+ + A S A +R+ E+ LP + +D NVITP T FM +++AL
Sbjct: 117 FRAADERLESDAISNACADRIVSEYH-----LPRPRVRERWDHNVITPSTAFMERVALAL 171
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
++YI +LN D W + V+ SDA+VPGEGEHKIM Y+R R+ PGYD NT H ++G+DA
Sbjct: 172 EWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMDA 231
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLI L L+THE H ILR + Q D C
Sbjct: 232 DLICLGLSTHEKHVCILRNQLTETFQPDHNRFC--------------------------- 264
Query: 295 VVVPKKPYQFLHIWTLREYLDYEF-RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ ++ T RE L +F I FE +VDDFIF+CFFVGNDFLPH+P
Sbjct: 265 ---------YFNLSTYREKLMQDFSNIEGMQFER----VVDDFIFLCFFVGNDFLPHVPL 311
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLT 380
+ I+ I +L+ Y ++F AL GYLT
Sbjct: 312 VSIKTRGIEMLLDHYVRDF-ALHGYLT 337
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 537 DKVKLG----EPGWKERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGV 589
DK LG + +++ YY+ KF R + L Y GL WVM YY +G
Sbjct: 429 DKQPLGFSYLDKAYRDAYYQHKFGWDPSANRAAFESHIRLCCAEYLRGLQWVMRYYTKGC 488
Query: 590 CSWQWFYPYHYAPFASDLKDLD-QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 648
SW+W++PYHYAP DL N+ + P P QLL V P S HALPE +
Sbjct: 489 PSWEWYFPYHYAPLLQDLAAFTATVNVEMRMSAPLHPVEQLLAVLPRLSVHALPEELHEA 548
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
+ DP S + FYP +VD + +S+QG+ ++PFI+
Sbjct: 549 VNDPKSVLGKFYPAIVDVDFSEANFSYQGVLRIPFIN 585
>gi|242023600|ref|XP_002432220.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212517617|gb|EEB19482.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 1587
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 218/408 (53%), Gaps = 64/408 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP YR++ +YP V D +E V ++N Y+D+N IIH
Sbjct: 1 MGVPRLYRFINRRYP-CVTDYVEVHQVP------------------HFENFYIDLNEIIH 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
CF +D A E+F +F YI+ LF +++P+KL ++++DGVAP+AKMN QR RRF+
Sbjct: 42 VCF--KDETASGKTKEIFSKIFTYIEFLFNLIKPKKLFFLSVDGVAPKAKMNNQRGRRFQ 99
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+K E E Q+ EG+ +P ++ F+S I+PGTEFM L L Y+I
Sbjct: 100 AAK-------ELENENQKLLAEGKPIPDEN----FNSLCISPGTEFMEELDKHLNYFIRK 148
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+++ D W+KI VI S PGEGEHKIM Y+R R +DP RHC+Y DADL++L
Sbjct: 149 KISTDSMWQKIVVIYSGYKTPGEGEHKIMDYIRYLRTTSDFDPYIRHCIYSSDADLMLLG 208
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LA HE++ SILR + K K+ +EK
Sbjct: 209 LALHEINVSILRR--------------------DPDSSSKEKKSNASKEEKN-------- 240
Query: 301 PYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
F+H+ LR+YLD EF+ PFE DLE ++DD+I M F +GNDF+P++P ++I
Sbjct: 241 --IFVHLSILRDYLDLEFQELKGCLPFEYDLEHLIDDWILMTFLMGNDFIPNLPNIQIDT 298
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
+ +++ YKK + L GY+ +L R + F+ + ++ F+
Sbjct: 299 NGVLVVLEAYKKIIQTLDGYINLNGYLNLPRFQKFLNKLSEHDMESFR 346
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 23/283 (8%)
Query: 506 DPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGW---------KERYYEEKFN 556
D + ++ K+ L+EL++ +D F + EE+ + K+ YY +K
Sbjct: 370 DLSDESQKRKSDLEELIKSTNDMFEFSDEEENHDDDDDDDDTFLFEFKMKKKNYYSDKMC 429
Query: 557 AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNIS 616
E E+ K++ Y + + W++ YY+ G SW W+YPYHY+PF SD+K+ + +N+
Sbjct: 430 F--DEMTEDISKNLTKNYIQTIQWILFYYFHGCASWTWYYPYHYSPFLSDIKNFEDYNLE 487
Query: 617 FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
+ G P PF+QL+ + P++ + LPE Y LM +SP+ DF+P DF+ D+NGK+ W+
Sbjct: 488 YNKGEPLLPFDQLVSILPASGKNYLPEVYHDLMNSTDSPLKDFFPDDFKRDLNGKKADWE 547
Query: 677 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQ 736
I +PF+D+ +L + + LTE+E RNS +++ L +Y + H
Sbjct: 548 SIILIPFVDQDEVLKYTTPLRNKLTEKEKIRNSHAPMLIYTYTDKNL--GVYKISNHFPD 605
Query: 737 LKIKERVEVKERLNPELSD------GMNGYISPCAGDPHPPVF 773
+ +++ N L D G+ +SP G PVF
Sbjct: 606 VLANHAQVIEKWHNSILVDKSKMVFGLRPGVSPLGG----PVF 644
>gi|71665066|ref|XP_819507.1| 5'-3' exonuclease XRND [Trypanosoma cruzi strain CL Brener]
gi|70884811|gb|EAN97656.1| 5'-3' exonuclease XRND, putative [Trypanosoma cruzi]
Length = 807
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 224/430 (52%), Gaps = 56/430 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEE-PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+ FY WL Y V DV EE +DG +P + +DN YLDMNG+I
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALDGQPLPASSDTTQ----RFDNFYLDMNGLI 56
Query: 60 HPCFHPEDRPAPTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
HPC H +E +F +D L+ +VRPRK L + IDGVAP++KMNQQRSRR
Sbjct: 57 HPCCHDTAPLPEPESEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRSRR 116
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+++ +S + ++ ++G LP +D NVITP T FM + +A++++I
Sbjct: 117 FRAAEERIESEVFSAQCAEDVVKKGLPLPQTRSR--WDHNVITPSTPFMERVGLAIEWFI 174
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++N DP W I VI SDA+VPGEGEHKIM Y+R R GY+P T H ++G+DADLI
Sbjct: 175 MKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRAQLGYNPQTSHVIHGMDADLIC 234
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+THE H +ILR + Q D C
Sbjct: 235 LGLSTHEEHVTILRNQLTETFQPDHNRFC------------------------------- 263
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
Y L+ + LR D+ ++D E ++DDFIF+CFFVGNDFLPH+P + I+
Sbjct: 264 ---YFSLYKYRLRLRDDF-----GGIGQMDFERVLDDFIFLCFFVGNDFLPHVPLISIKT 315
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ--AVGSYEDR------IFQKRAR 410
I LL+ Y + F+ YLT G + + + F++ VG E + + + R
Sbjct: 316 KGIELLLDHYVRGFKD-HSYLTHGGEVNYGNLAKFLRFFLVGYMEKLKQEYGGVLRAKQR 374
Query: 411 LHQRHAERIK 420
+ ER+K
Sbjct: 375 AKAKVEERVK 384
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 603
+++YYE+KF P +RE K + L Y G WVM YY G SW W+YP++YAP
Sbjct: 442 RDKYYEKKFGW-DPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPL 500
Query: 604 ASDLKDL-DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
DL + + LG P P QLL V P S ALPE + DP S + FYP
Sbjct: 501 LQDLAHFPGKVKVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPESVLGVFYPE 560
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
+VD + +S+QG+ +LPF++ + L +K+
Sbjct: 561 KVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 594
>gi|209878396|ref|XP_002140639.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
gi|209556245|gb|EEA06290.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
Length = 1610
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 217/419 (51%), Gaps = 111/419 (26%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ FYRW++E+YP + VI P+ +DNLYLD+NGI H
Sbjct: 1 MGISRFYRWISERYPQINE--------VIGNGDTPI-----------FDNLYLDVNGIAH 41
Query: 61 PCFHPEDRPAP-----TTFD---EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
+ + +F E++ +F YI RL V+P+K++Y+A+DGVAPRAKMN
Sbjct: 42 NSIYNNEMTVSYSGLNLSFGGSPEIWTGIFKYISRLVNTVKPKKVVYIAVDGVAPRAKMN 101
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQRSRRFR+++DAA L +E + K+++ FDSN ITPGT FM L+
Sbjct: 102 QQRSRRFRSARDAA--------LMEELAVRNSEFANKTNT--FDSNCITPGTSFMYELNR 151
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L++++H ++ NDP W ++VILS +++PGEGEHKIM Y+R ++ P Y+ NTRHCLYGL
Sbjct: 152 QLKFFVHYQIQNDPIWRNLEVILSGSDIPGEGEHKIMDYIRCIKSQPDYNNNTRHCLYGL 211
Query: 233 DADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML+LA+HE HFS+LR E+ F P +
Sbjct: 212 DADLIMLSLASHEPHFSLLREEIKFVPSKV-----------------------------L 242
Query: 292 GDEVVVPKKPYQFLHIWTLREYL---------------------------------DYEF 318
+ ++ K +QFLHI LREYL D
Sbjct: 243 DNRIIFTKDKFQFLHISILREYLVRELNPIYSVSKLDLNVRYMEEMGVQDIVSGCKDESI 302
Query: 319 RIPNPP-----------FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 366
+ P F++D E ++DDFIF+ + VGNDFLPH+P + G +L +
Sbjct: 303 TVTTPKLVQSSFNINLDFKMDEERLIDDFIFLGYIVGNDFLPHIPFHTVDNGLDRILCS 361
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 39/171 (22%)
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL-------------- 610
ET +D+V Y EGL W+ +YY+ G SW+WFY Y YAP+A D+ +
Sbjct: 502 ETLEDLVFCYLEGLQWISYYYFRGTPSWRWFYSYRYAPYACDIAAILNHWLRLGKITRVN 561
Query: 611 -DQFNISFE------------------------LGHPFKPFNQLLGVFPSASSHALPEHY 645
+ N+S E LG P +PF QL+GV PS SS+ LPE +
Sbjct: 562 KSEMNLSMESDILNIEKMYKDGIHLNNMVFQYILGTPLQPFEQLMGVLPSRSSNLLPEPF 621
Query: 646 RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
R+L + SPI D+YP+ F++DM G + W G+ +PFIDE LL + +
Sbjct: 622 RRLFMNKKSPIIDYYPSQFDIDMEGIKVPWGGVTLIPFIDEELLLKSISYV 672
>gi|339237353|ref|XP_003380231.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
gi|316976968|gb|EFV60153.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
Length = 614
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 217/397 (54%), Gaps = 69/397 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + V+E + IP YDNLYLD NGIIH
Sbjct: 1 MGVPRFFRWLSERYPGLSQLVVESQ--------IP-----------SYDNLYLDFNGIIH 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C HP +P D F+C + LF +++PRK+L++A+DGVAPRAKMNQQRSRRF
Sbjct: 42 NCSHPN---SP---DATFRC----TEGLFQLIKPRKVLFIAVDGVAPRAKMNQQRSRRFM 91
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++K+A DS R + R G +P DS FDSN ITPGTEFM L I L+Y+I+L
Sbjct: 92 SAKEAEDS-------RLKAIRNGEVIP---DSDPFDSNCITPGTEFMERLHIHLKYFINL 141
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+L++DP W+ + V S + PGEGEHKI++++R R+ YD NT HC+YGLDADLI L
Sbjct: 142 KLSSDPLWQNVDVYYSGHDCPGEGEHKILAFIRFMRSQADYDSNTTHCIYGLDADLIFLG 201
Query: 241 LATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPK 299
+A HE +FSILR EVV+ + + C + A + + ++V
Sbjct: 202 MAMHEPYFSILREEVVYDSRSKKRYIKCDDDDDNNNLLRFAYGQFA--YGRRSEQV---- 255
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
P D E I+DD+IFM FF+GNDF+P++P L E
Sbjct: 256 -----------------------KPDVYDEEKIIDDWIFMSFFIGNDFIPNVPMLITNEN 292
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 396
A+ + Y+ F + SK + R HF+ +
Sbjct: 293 ALPNVWLAYQNAFPNMDACGWLESKRAQRVRFHFLSS 329
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 75/114 (65%)
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
FY +HYAPF SDL D + I+FELG PF PF QLL V P +S LPE Y+ LM +P+S
Sbjct: 452 FYGFHYAPFVSDLCDFNVGEITFELGEPFLPFQQLLAVLPPSSRKLLPEPYQDLMVNPDS 511
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
P+S YP D E DMNGK+Y W+ I KLPFIDE L D V L ++E RRN
Sbjct: 512 PLSYAYPEDVERDMNGKKYEWECILKLPFIDEEILFDAVYPFNDALKDDEKRRN 565
>gi|407849157|gb|EKG03993.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 383
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 212/397 (53%), Gaps = 48/397 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEE-PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+ FY WL Y V DV EE +DG +P + +DN YLDMNG+I
Sbjct: 1 MGIAGFYLWLQRWYGDCVEDVPEEVVKAALDGQPLPASSDTTQ----RFDNFYLDMNGLI 56
Query: 60 HPCFHPEDRPAPTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
HPC H +E +F +D L+ +VRPRK L + IDGVAP++KMNQQRSRR
Sbjct: 57 HPCCHDTAPLPEPESEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQRSRR 116
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FRA+++ +S + +E ++G LP +D NVITP T FM + +A++++I
Sbjct: 117 FRAAEERIESEVFSAQCAEEVVKKGLPLPQTRSR--WDHNVITPSTPFMERVGLAIEWFI 174
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++N DP W I VI SDA+VPGEGEHKIM Y+R R GY+P T H ++G+DADLI
Sbjct: 175 MKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRAQLGYNPQTSHVIHGMDADLIC 234
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L+THE H +ILR + Q D C
Sbjct: 235 LGLSTHEEHVTILRNQLTETFQPDHNRFC------------------------------- 263
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
Y L+ + LR D+ ++D E ++DDFIF+CFFVGNDFLPH+P + I+
Sbjct: 264 ---YFSLYKYRLRLRDDF-----GGIGQMDFERVLDDFIFLCFFVGNDFLPHVPLISIKT 315
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ 395
I LL+ Y + F+ YLT G + + + F++
Sbjct: 316 KGIELLLDHYVRGFKD-HSYLTHGGEVNYGNLTKFLR 351
>gi|427788379|gb|JAA59641.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1628
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 191/318 (60%), Gaps = 42/318 (13%)
Query: 91 MVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS 150
M++P+K +MA+DGVAPRAKMNQQR RRF+++K+A A+E+ R G LP
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQQRGRRFKSAKEAQ---AQEKEARDR----GEVLP--- 50
Query: 151 DSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMS 210
+ FDSN I+PGTEFMA L LQ ++ +++ DP W +KV LS PGEGEHK+M
Sbjct: 51 TEERFDSNCISPGTEFMARLQDQLQQFVATKVSTDPLWRGVKVYLSGHQTPGEGEHKVMD 110
Query: 211 YVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQP 270
++R +R+ PGYDPNTRHCLYGLDADLIML + +HE HF++LRE + +Q++
Sbjct: 111 FIRTERSQPGYDPNTRHCLYGLDADLIMLGMCSHEPHFALLREEIVYGKRQNQ------- 163
Query: 271 GHLAANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFR--IPNPPFEI 327
KR + VP++ + LH+ LREYL+ EF+ PFE
Sbjct: 164 -----------KR-----------LNVPEEITFHLLHLSLLREYLELEFQELKKTIPFEF 201
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 387
++ I+DD++ MCF VGNDFLPH+P L I A+ +L Y +LGGY+ + K +L
Sbjct: 202 KMDNIIDDWVLMCFLVGNDFLPHLPNLHIAHNALPVLYQAYIDVMPSLGGYINEYGKLNL 261
Query: 388 RRVEHFIQAVGSYEDRIF 405
R E F+ + ++ F
Sbjct: 262 ERFEKFLTRLSQFDYEKF 279
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 115/194 (59%), Gaps = 2/194 (1%)
Query: 529 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 588
F+SD +E +++ K YY K + + +E ++ Y + W +HYYY G
Sbjct: 336 FDSDEDQEGLLEMEFRQHKRDYYVNKL--EYADVNKEVMQEQAHGYVRAIQWNLHYYYNG 393
Query: 589 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKL 648
V SW W+YP+HY+P+ SD+KD +++FELG PF PF QL+ + PSAS +P Y+ L
Sbjct: 394 VQSWNWYYPHHYSPYISDIKDFQNLDMTFELGKPFLPFQQLMAILPSASKKLVPSAYQDL 453
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
M + SPI D+YP DF D+NGK++ W+ + +PFI+E RLL +++ LTEEE RN
Sbjct: 454 MENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEGRLLPAMEERFEKLTEEEKSRN 513
Query: 709 SIMADMLFVLLSHP 722
+LFV P
Sbjct: 514 GHSGHLLFVYSEEP 527
>gi|170119902|ref|XP_001891045.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164633808|gb|EDQ98306.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 345
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 216/403 (53%), Gaps = 74/403 (18%)
Query: 10 LAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPC--FHPED 67
L E+YPL +++I+E KIP E+DNLYLD NGIIH C + ED
Sbjct: 1 LRERYPLT-SELIQEN-------KIP-----------EFDNLYLDFNGIIHNCSRLNDED 41
Query: 68 RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAAD 127
T +++F +F Y+D LF ++ +KL ++A+DGVAPRAKMNQQRSRRFR +K+A
Sbjct: 42 THFRLTEEQIFTLIFTYVDHLFGKIKLKKLFFVAVDGVAPRAKMNQQRSRRFRTAKEA-- 99
Query: 128 SAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPG 187
+ +R++ E +G KLP + + FDSN I P L+Y+IH +++ D
Sbjct: 100 -----KVVREKAELKGEKLPME---KAFDSNCIAPVNTIYGTFIDQLRYFIHKKISEDSN 151
Query: 188 WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVH 247
W ++KV+LS VPGEGEHKIM Y+RL R PGY+PN RHCLYGLDADLIML L +H+ H
Sbjct: 152 WREVKVVLSGREVPGEGEHKIMEYIRLSRAQPGYNPNIRHCLYGLDADLIMLGLLSHDPH 211
Query: 248 FSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLH 306
+LRE V F P + K + + LH
Sbjct: 212 LCLLREEVKFGPASRKKW-----------------------------NTSLESVNFYLLH 242
Query: 307 IWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLL 364
+ +REYLD EF PF+ +L+ ++DDF LP +P L I E + L
Sbjct: 243 LSLMREYLDLEFHEIQLMLPFDYNLKRVIDDF-----------LPDLPDLHIHENGLEKL 291
Query: 365 MAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
VYKK L GY +G + +R++ + + +E +F+K
Sbjct: 292 FDVYKKVLPGLDGYTNEGGVINTKRLQVILDEMTPWEQGVFEK 334
>gi|326437826|gb|EGD83396.1| single-stranded RNA 5'-3' exonuclease [Salpingoeca sp. ATCC 50818]
Length = 1780
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 233/466 (50%), Gaps = 103/466 (22%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP +R L E+YPL++ + E P E+DNLYLD NGI+H
Sbjct: 1 MGVPRLFRLLVERYPLILRGLDEPPPP-------------------EFDNLYLDFNGIVH 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H + A + E+ +F I++L ++PRK+L++AIDGVAPRAKM QQR RRF+
Sbjct: 42 TCTHGNELAATRSQQEMMMAIFSAIEQLVDAIKPRKVLFIAIDGVAPRAKMIQQRQRRFK 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A+ R R++F+++ P D+ FDSN ITPGTEFMA L L Y+I
Sbjct: 102 AA-----------RARKQFQQDN---PEHGDA--FDSNCITPGTEFMATLEEYLIYFIQR 145
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
++ D W ++V+LS VPGEGEHKIM +VR ++ YDPNTRHC++GLDADLIMLA
Sbjct: 146 KVEEDAAWRDLEVVLSGHRVPGEGEHKIMDFVRRLKSQESYDPNTRHCIHGLDADLIMLA 205
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE HF I+RE V + ++ + K V +
Sbjct: 206 LATHEPHFCIVREKVL--------------------VRKRGRKIVNDLTSKA-TVFQHTQ 244
Query: 301 PYQFLHIWTLREYLDYEFRIPN--PPFEIDL----------------------------- 329
Q +HI LREYL E + N P F L
Sbjct: 245 ELQLIHIGLLREYLHLELSLRNIGPDFRQGLVSSAAALRDAMVDAKFRQLPEEMQALRTS 304
Query: 330 -------ECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFR---ALGGYL 379
E ++DDF+F+ F +GNDFLPH+ ++ + ++ + + Y++ YL
Sbjct: 305 VVQSRNVERLIDDFVFLTFLLGNDFLPHLVCADLDDDGLDAIFSAYREAITREDLKTQYL 364
Query: 380 TDGSKPSLRRVEHFIQAV----GSYEDRIFQKRARLHQRHAERIKR 421
D K ++ F++AV E++ +++ A+ + + + KR
Sbjct: 365 VDAEKATVNLA--FLRAVFEVFSRTEEQGYKQEAQTEKSKSTKSKR 408
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V +G+ + YY KF + E R +V Y EGL W ++YYY+GV SW WFYP+
Sbjct: 971 VGVGDISTVDDYYRVKF--EDVEGHPVDRVVLVKEYLEGLLWTLNYYYQGVASWSWFYPH 1028
Query: 599 HYAPFASD-LKDLDQF-NISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
+ AP +D L D +I+F+ P PF QLL V P+ SS LP R L D
Sbjct: 1029 YAAPLPTDVLAACDVLPSIAFDAETTPLLPFQQLLTVLPAESSQLLPPSLRPLPLD---Q 1085
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK--IEHTLTEEEARRNS 709
+ +FYP+++ + + W+ I +P ID +L + L++EE RNS
Sbjct: 1086 LKEFYPSEYPCVPDVRGREWRDIVVIPVIDGEKLHSAYTRAIAAAPLSDEETARNS 1141
>gi|66475504|ref|XP_627568.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
gi|46229016|gb|EAK89865.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
Length = 1588
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 224/406 (55%), Gaps = 95/406 (23%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ FYRW++E+YP I EE + DG+ P +DNLYLD+NGI H
Sbjct: 1 MGISRFYRWISERYP-----QINEE--ISDGIIPP------------FDNLYLDVNGIAH 41
Query: 61 PCFHPEDRPAPTT--------FDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
+ + P+ E++ +F YI++L + +PRKLLY+A+DGVAPRAKMN
Sbjct: 42 NSVNSSEMRTPSNGINLSEKGSPEIWAAIFRYINKLVYIAKPRKLLYIAVDGVAPRAKMN 101
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQRSRRFR+++D+ E L++ E + + VFDSN ITPGT FM L
Sbjct: 102 QQRSRRFRSARDS-------EFLKK---MEKNNSIDTTQNNVFDSNCITPGTTFMHELRR 151
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L+++I+ +++ DP W+ ++V+LS A+VPGEGEHKIM ++R ++ Y+ NT HCLYGL
Sbjct: 152 QLEFFIYHQIHTDPLWKHLEVVLSGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHCLYGL 211
Query: 233 DADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML+LA+HE HFS+LR E+ F+ + N E +
Sbjct: 212 DADLIMLSLASHEPHFSLLREEIKFSSSR---------------NYESRT---------- 246
Query: 292 GDEVVVPKKPYQFLHIWTLREYL------------------DYEFRIPNPPFE------- 326
V K+ +QFLHI LR+Y+ Y+F + N +
Sbjct: 247 ----VCTKERFQFLHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKNDSQDQISIFDN 302
Query: 327 --IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
ID E ++DDFI + F VGNDFLPH+P + +G ++ + Y+K
Sbjct: 303 VLIDGERLIDDFIILGFIVGNDFLPHIPFHTVDQGLARIISS-YRK 347
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 92/182 (50%), Gaps = 39/182 (21%)
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK----- 608
K N + + +D+V Y EGL WV +YY+ GV SW+W+YPY YAPFA D+
Sbjct: 476 KSNTNSNRITTNSIEDIVFCYLEGLQWVSYYYFRGVPSWRWYYPYRYAPFACDIAIILSC 535
Query: 609 ----------------------------------DLDQFNISFELGHPFKPFNQLLGVFP 634
+L+ F G+P +PF QL+GV P
Sbjct: 536 WLQNKSISTLSRDDIVKYGSSKLMFVHTMYSEEIELNGLAFRFIKGNPLQPFEQLMGVLP 595
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
S S LP+ +RKL T+PNSP+ FYP +FEVDM G + W G+ +PFIDE LLD +
Sbjct: 596 SNSKDLLPKPFRKLFTNPNSPLLSFYPANFEVDMEGVKVPWGGVTLIPFIDEFLLLDSIT 655
Query: 695 KI 696
+
Sbjct: 656 YV 657
>gi|32398787|emb|CAD98497.1| exonuclease ii, possible [Cryptosporidium parvum]
Length = 1572
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 225/406 (55%), Gaps = 95/406 (23%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ FYRW++E+YP I EE + DG+ P +DNLYLD+NGI H
Sbjct: 1 MGISRFYRWISERYP-----QINEE--ISDGIIPP------------FDNLYLDVNGIAH 41
Query: 61 PCFHPEDRPAPTT--------FDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
+ + P+ E++ +F YI++L + +PRKLLY+A+DGVAPRAKMN
Sbjct: 42 NSVNSSEMRTPSNGINLSEKGSPEIWAAIFRYINKLVYIAKPRKLLYIAVDGVAPRAKMN 101
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQRSRRFR+++D+ E L++ E + + VFDSN ITPGT FM L
Sbjct: 102 QQRSRRFRSARDS-------EFLKK---MEKNNSIDTTQNNVFDSNCITPGTTFMHELRR 151
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L+++I+ +++ DP W+ ++V+LS A+VPGEGEHKIM ++R ++ Y+ NT HCLYGL
Sbjct: 152 QLEFFIYHQIHTDPLWKHLEVVLSGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHCLYGL 211
Query: 233 DADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
DADLIML+LA+HE HFS+LR E+ F+ + N E +
Sbjct: 212 DADLIMLSLASHEPHFSLLREEIKFSSSR---------------NYESRT---------- 246
Query: 292 GDEVVVPKKPYQFLHIWTLREYL------------------DYEFRIPNPPFE------- 326
V K+ +QFLHI LR+Y+ Y+F + N +
Sbjct: 247 ----VCTKERFQFLHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKNDSQDQISIFDN 302
Query: 327 --IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
ID E ++DDFI + F VGNDFLPH+P + +G + +++ Y+K
Sbjct: 303 VLIDGERLIDDFIILGFIVGNDFLPHIPFHTVDQG-LARIISSYRK 347
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 91/179 (50%), Gaps = 39/179 (21%)
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK----- 608
K N + + +D+V Y EGL WV +YY+ GV SW+W+YPY YAPFA D+
Sbjct: 476 KSNTNSNRITTNSIEDIVFCYLEGLQWVSYYYFRGVPSWRWYYPYRYAPFACDIAIILSC 535
Query: 609 ----------------------------------DLDQFNISFELGHPFKPFNQLLGVFP 634
+L+ F G+P +PF QL+GV P
Sbjct: 536 WLQNKSISTLSRDDIVKYGSSKLMFVHTMYSEEIELNGLAFRFIKGNPLQPFEQLMGVLP 595
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
S S LP+ +RKL T+PNSP+ FYP +FEVDM G + W G+ +PFIDE LLD +
Sbjct: 596 SNSKDLLPKPFRKLFTNPNSPLLSFYPANFEVDMEGVKVPWGGVTLIPFIDEFLLLDSI 654
>gi|348581618|ref|XP_003476574.1| PREDICTED: 5'-3' exoribonuclease 1-like [Cavia porcellus]
Length = 1639
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 190/300 (63%), Gaps = 38/300 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPGTEFMA L L+Y++
Sbjct: 102 FRSAKEA------EDKIKKAVEK-GETLPTEAR---FDSNCITPGTEFMARLHEHLKYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++++ D W+ + + S PGEGEHKIM ++R ++ +DPNTRHCLYGLDADLIM
Sbjct: 152 NMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKQDHDPNTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFD-EKGDEVVV 297
L L +HE HFS+LRE V G++ HL K+ K EFD E EV V
Sbjct: 212 LGLTSHEAHFSLLREEVRFGGKKT------HSAHLNLTRYEKSIVKRSEFDREHFSEVFV 265
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 99/140 (70%)
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
D + Y + + W++HYYY GV SW WFYPYHYAPF SD++++ I FELG PFKPF Q
Sbjct: 363 DQAVCYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQ 422
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
LL V P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE R
Sbjct: 423 LLAVLPAASKNLLPVCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKR 482
Query: 689 LLDEVKKIEHTLTEEEARRN 708
LL+ ++ H+L EEE +RN
Sbjct: 483 LLEAMEACNHSLKEEERKRN 502
>gi|336472444|gb|EGO60604.1| hypothetical protein NEUTE1DRAFT_127448 [Neurospora tetrasperma
FGSC 2508]
gi|350294329|gb|EGZ75414.1| 5'-3' exoribonuclease 1 [Neurospora tetrasperma FGSC 2509]
Length = 1226
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 193/321 (60%), Gaps = 59/321 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RWL+E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPE--DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + D T +E+F +F+YI+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR +A + E+ R + REG++LP + + FDSN ITPGTEFMA LS L+Y+I
Sbjct: 102 FR-------TALDNEKARDKAIREGKELPKE---EPFDSNCITPGTEFMAKLSQQLRYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
H +++ D W++ +++LS VPGEGEHKIM Y+R R YD N RHCLYGLDADLIM
Sbjct: 152 HKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L L +H+ HF +LRE V T G+ G AK KA +E+
Sbjct: 212 LGLLSHDPHFCLLREEV-TFGR------------------GPAKHKAKGLEEQN------ 246
Query: 299 KKPYQFLHIWTLREYLDYEFR 319
+ +H+ +REYL+ EF+
Sbjct: 247 ---FYLMHLCIVREYLELEFQ 264
>gi|312075567|ref|XP_003140474.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
gi|307764361|gb|EFO23595.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
Length = 258
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/257 (48%), Positives = 176/257 (68%), Gaps = 31/257 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V+++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVQDE-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D + +E+F+ +F+YI+ LF +++PRK+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 SCSHPDDEDVSFRISEEEIFRDIFNYINFLFGIIKPRKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F ++K+A ++ + + G K+P D + FDSN ITPGT FMA L LQY++
Sbjct: 102 FMSAKNAQEAMNKARK-------NGVKIP---DEKPFDSNCITPGTHFMARLHEQLQYFV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ D W+ +++ LS N PGEGEHKIM ++R +R+ YD NTRHCLYGLDADLIM
Sbjct: 152 QMKITTDSCWQGLRIYLSGHNCPGEGEHKIMDFIRSERSRSDYDANTRHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVV 255
L + +HE HF++LRE V
Sbjct: 212 LGICSHEPHFALLREEV 228
>gi|328865598|gb|EGG13984.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1808
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 225/397 (56%), Gaps = 69/397 (17%)
Query: 9 WLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHP-ED 67
W +E+YP ++ ++++ P EYDNLYLDMNGIIH C
Sbjct: 208 WASERYPQIIQNLVDSNPP-------------------EYDNLYLDMNGIIHACSQEMTT 248
Query: 68 RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAAD 127
+ + +E+ + + +YID+LF ++RP KLLYMAIDGVAPR+K+NQQR RRF
Sbjct: 249 KLIRFSEEELIRLVCNYIDKLFHIIRPTKLLYMAIDGVAPRSKLNQQRQRRFL------- 301
Query: 128 SAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPG 187
S EE+ ++E +EG++LP +F N ITPGTEFM+ LS LQ++I +++ D
Sbjct: 302 SVFREEKEKKELIKEGKELP----EVIFSRNAITPGTEFMSNLSECLQFFIKKKISEDLS 357
Query: 188 WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVH 247
W +I++I S PGEGEHKI+ Y+R + P +DPN HCLYGLDADLI+LAL THE H
Sbjct: 358 WREIEIIFSGPENPGEGEHKIIDYIRKYKASPDWDPNQSHCLYGLDADLILLALVTHEPH 417
Query: 248 FSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLH 306
FSILR E+ F P Q +K + D +Q LH
Sbjct: 418 FSILREEIAFRP-QANK-----------------------QLD------------FQLLH 441
Query: 307 IWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 366
I LREY++ E + F LE I+DDF+ + F GNDFLPH+P EI G +N ++
Sbjct: 442 ISLLREYMELELKC-ELDFGYSLERIIDDFVLVMIFFGNDFLPHLPFCEISTGGLNSVLE 500
Query: 367 VYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 403
+YK LGGYLTD ++ L R+ F+ + +E +
Sbjct: 501 LYKNSLNELGGYLTDEAEIDLDRLAVFLAKIAVFERK 537
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 122/213 (57%), Gaps = 8/213 (3%)
Query: 503 FETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 562
E D Q+++E+ + + + R K + F E+D V+ W YY KF PEE
Sbjct: 556 LENDVQDDEEKKEIERRAFERLK-NHFGEITFEDDDVEDINDYWINGYYRSKF-PDFPEE 613
Query: 563 REET----RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFE 618
++ +VL+Y EGL WV++YY+ G SW+W+YPY+YAP A D++DL I FE
Sbjct: 614 NRSAIVDYKRHLVLKYVEGLSWVLNYYHNGCISWRWYYPYYYAPLAVDMRDLSSLEIEFE 673
Query: 619 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 678
P PF QL+ V P S+H LP Y++LMT SPI DFYPT+FEVD + Y + GI
Sbjct: 674 SNGPVTPFQQLMSVLPPQSAHLLPAPYQELMTSAASPIIDFYPTEFEVDTSDSHY-FDGI 732
Query: 679 AKLPFIDEARLLDEVKKIEH-TLTEEEARRNSI 710
A + F D RLL+ + LT++E RN++
Sbjct: 733 AVIGFPDLGRLLEATAAEDSWDLTDKERSRNAL 765
>gi|413932822|gb|AFW67373.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 541
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 152/219 (69%), Gaps = 2/219 (0%)
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
V +Y EGLCWVM YYY+GVCSWQWFYPYHYAPFASDLK L + I+F LG PFKPF+QL+
Sbjct: 18 VQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLGQPFKPFDQLM 77
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
G P+ASS+ALP++Y LM+DP+SP+ FYP DFE+DMNGKR++WQG+AKLPFIDE RLL
Sbjct: 78 GTLPAASSNALPKYYGDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLL 137
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN 750
E +K+E TLTEEE RN M D+++V +HPL I L ++ L + + +
Sbjct: 138 AETRKLEDTLTEEEKFRNRTMLDIIYVRDTHPLITQIIFLYQNYYHLSRTDPYVIP--IE 195
Query: 751 PELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
P S GMNG++ + + SPV I N+VL
Sbjct: 196 PAASGGMNGFLCLSERNWYSVTVTSPVKGFNGIAQNRVL 234
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 264/579 (45%), Gaps = 159/579 (27%)
Query: 1 MGVPAFYRWLAEKYPLV---VADVIEEEPVVIDGVKIPVDTS----KPNPNGL------- 46
MGVP F+RWL+E+YPL+ + V EE G+ +P D + +P+ +
Sbjct: 124 MGVPKFFRWLSERYPLINQPIHCVPREETKKAHGL-LPSDANSSDGQPSTSSSGGEKDGA 182
Query: 47 -----------------------EYDNLYLDMNGIIHPCFHPE----------------- 66
E+D LYLDMNGIIH H
Sbjct: 183 DTPFPVEGKKDARKNTDIPHIMPEFDRLYLDMNGIIHCASHNNSEEEVEKQIDGKESTDT 242
Query: 67 DRP----APTTFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRSRRFRA 121
DRP + T +++FQ + Y+DR+ +V+P +L+++AIDGVAPRAK+NQQRSRR+R+
Sbjct: 243 DRPRIVGSAITEEQIFQNVCYYLDRVISDIVQPTELVFLAIDGVAPRAKLNQQRSRRYRS 302
Query: 122 SK------------------------------------------DAADSAAEEERLRQEF 139
D D+A +R +
Sbjct: 303 GTEEEIEHHLMTLQRAKSSDHSDVDSAEYLIEADGGAFDGFWPMDRDDTARGAQRFSGKI 362
Query: 140 EREGRKLPPKSDS-------QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK 192
E K S S Q F SN ITPGT F S + +I +L+ DP W+ +
Sbjct: 363 EATTDKSSSASVSVDQTPTVQGFHSNAITPGTLFFDRCSSRIIAFIREKLDTDPRWKNLT 422
Query: 193 VILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
+I S +VPGEGEHKIM ++R +++ P YDPN +HC+YG D DL+ML+LATHE H +LR
Sbjct: 423 IIFSGHDVPGEGEHKIMDFIRHEKHKPEYDPNKKHCIYGQDGDLVMLSLATHEPHMCLLR 482
Query: 253 -EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP-----------KK 300
EVVF ++ + H E +A + E + +P
Sbjct: 483 EEVVFDMARRKVLERLAKVEH-----EKALDERAQDVGESSEGKSLPLLSPSIASYIHNA 537
Query: 301 PYQFLHIWTLREYLDYEFRI-----PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
++ LH+ LR+YL EF N F+ LE +DDF+FM FFVGNDFLPHMP L+
Sbjct: 538 NFELLHVSLLRDYLGLEFETQEFYSKNSRFK--LEPTIDDFVFMTFFVGNDFLPHMPALD 595
Query: 356 IREGAINLLMAVYKK---------EFRALGG----------------YLTD-GSKPSLRR 389
I + A +LL YKK E+R YLTD G+ S R
Sbjct: 596 IGDEAFDLLFYAYKKNRIKWLKDGEYRRTVKITDKNNKTRNKTMHHPYLTDAGNITSGTR 655
Query: 390 VEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARR 428
+E F+ VG YED + R + ERI++ +A R
Sbjct: 656 LEAFLSDVGGYEDPYYSNRRESMEEENERIRKADRKAGR 694
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 26/193 (13%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLR--YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
K RYY EKF TP + E K + LR Y +GL W + YYY+G SW WFYPY+Y P
Sbjct: 756 KGRYYYEKFGI-TPFDAE---KHMTLRKEYVKGLVWTLEYYYKGCVSWDWFYPYNYGPMI 811
Query: 605 SDLKDLDQF--NISF----------------ELGHPFKPFNQLLGVFPSASSHALPEHYR 646
SDL +++ +ISF G P +PF QLLG P +SS+ LP+ YR
Sbjct: 812 SDLTNMNSILNDISFFDKDSETQKKGKGVRRVSGEPLRPFEQLLGCLPPSSSYLLPKPYR 871
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI--EHTLTEEE 704
LMT P SP+ ++YP F VDMNGKR+ W+ + LPFID +L++ + + E L+EEE
Sbjct: 872 WLMTSPESPLKEYYPESFTVDMNGKRWPWEAVTLLPFIDADKLIEASRTLVDESFLSEEE 931
Query: 705 ARRNSIMADMLFV 717
+ N I +F
Sbjct: 932 KKLNVIGQSRVFT 944
>gi|449689746|ref|XP_004212130.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 512
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 184/321 (57%), Gaps = 44/321 (13%)
Query: 88 LFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP 147
LF +++P+K +MA+DG APRAKMNQQRSRRFR +K+ S + +R G LP
Sbjct: 45 LFRIIKPKKNFFMAVDGCAPRAKMNQQRSRRFRTAKEVGIS------IENAIQR-GETLP 97
Query: 148 PKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHK 207
K DS FDSN ITPGTEFM L L+Y+I+ +++ DP W+ V S NVPGEGEHK
Sbjct: 98 -KGDS--FDSNCITPGTEFMDRLHQQLKYFINYKISTDPLWKHCVVHFSGHNVPGEGEHK 154
Query: 208 IMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLC 267
IM Y+R ++ P YDPNTRHCLYGLDADLIML L+ HE HF +LRE V
Sbjct: 155 IMDYIRYCKSKPDYDPNTRHCLYGLDADLIMLGLSVHEPHFCLLREEV------------ 202
Query: 268 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVP-KKPYQFLHIWTLREYLDYEFRIPNPP-- 324
F K + V+ P + + LH+ LREYLD EF
Sbjct: 203 -------------------RFGAKSNIVLSPGDQVFHLLHLSLLREYLDLEFSSMKESLE 243
Query: 325 FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 384
FE DLE I+DD+IF+ F VGNDF+PH+P + I A+ +VYK GY+ +G
Sbjct: 244 FEYDLEKIIDDWIFLGFLVGNDFVPHLPHMHINHDALPYFYSVYKDFLITADGYINEGGV 303
Query: 385 PSLRRVEHFIQAVGSYEDRIF 405
+L R++ F V ++ +F
Sbjct: 304 VNLTRLKQFFGCVSDFDYELF 324
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASD 606
K+ YY EKF E + + Y L W+ HYY+ G+ SW W+YPYHY+P+ SD
Sbjct: 415 KQNYYAEKFGMNVKNNIE--MQTICSNYVTALQWISHYYFNGLQSWSWYYPYHYSPYMSD 472
Query: 607 LKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR 646
L + IS +LG PF+PF QLL V P+AS LP+ ++
Sbjct: 473 LASFELEKISMDLGTPFRPFEQLLAVLPAASGKLLPKAFQ 512
>gi|300121215|emb|CBK21596.2| unnamed protein product [Blastocystis hominis]
Length = 938
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 223/418 (53%), Gaps = 69/418 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P FYR+L E+YPLV V E +P D LYLD+NGIIH
Sbjct: 1 MGIPKFYRYLLERYPLVSEIVTSSE-------FLP-----------RCDYLYLDVNGIIH 42
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
H E PTT D V +F YI +F ++PRKL+++A+DGVAPRAK+NQQRSRR
Sbjct: 43 NATHGESAIGEIPTT-DMVASYVFGYISDIFANIQPRKLMFIAVDGVAPRAKLNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
+R + D E E G K +VFDSN ITPGTEFM + ++Y+I
Sbjct: 102 YRTALDRC----------LEVESTGHK------GEVFDSNCITPGTEFMHKVDQLIEYFI 145
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+++ DP W V+ S + PGEGEHKIM+++R P Y+ RHC+YGLDADLI+
Sbjct: 146 RKKISEDPLWRNTMVLYSSHSDPGEGEHKIMNFIRYLCTSPDYNAAERHCIYGLDADLIL 205
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAK-RKAGEFDEKGDEVVV 297
L+L+ H+V+ +LR ++ + +A RK + +
Sbjct: 206 LSLSLHDVNVILLRNII----------------------DFRAYFRKVQTTVNRAE---- 239
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDFLPHMPTLE 355
P ++ HI LREYL + + N + D E ++DDF+F+ +GNDFLP +P+L+
Sbjct: 240 PIHKWEIFHISVLREYLFRDLQPSNASWMSVKDRERLIDDFVFIMILLGNDFLPELPSLD 299
Query: 356 IREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
I G+I L+A+YK+ +L D +KPSL + F Q + E+ + A LH+
Sbjct: 300 IVNGSIQDLIAIYKEVCLDRHKFLVDDAKPSLSLLRQFFQRLSETEEVMI---ALLHE 354
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
Query: 562 EREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGH 621
E E DV Y EGL WV+ YYY GV SW WFY YHYAP SDL D SF LG
Sbjct: 426 ENEVILDDVCRNYYEGLYWVLLYYYRGVRSWTWFYRYHYAPLPSDLARCDMKYSSFSLGA 485
Query: 622 PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKL 681
P KPF Q L P S LP YR L++ SP++DFYP F +DMN K+ W+G+ +
Sbjct: 486 PVKPFLQQLSCLPPQSQSILPASYRVLVS-AKSPVADFYPARFSIDMNNKKNPWEGVNLI 544
Query: 682 PFIDEARLLD--EVKKIEHTLTEEEARRNSIMADMLF 716
PFID RL E +++ LT +E +RN+ LF
Sbjct: 545 PFIDIDRLTAAMEALQVDAGLTLDEQKRNAFQGPQLF 581
>gi|242218321|ref|XP_002474952.1| predicted protein [Postia placenta Mad-698-R]
gi|220725867|gb|EED79836.1| predicted protein [Postia placenta Mad-698-R]
Length = 253
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/261 (51%), Positives = 171/261 (65%), Gaps = 33/261 (12%)
Query: 7 YRWLA-EKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHP 65
Y +L E+YPL + +I+E KIP E+DNLY+D NGIIH C HP
Sbjct: 18 YSFLCRERYPLT-SQLIQEN-------KIP-----------EFDNLYVDFNGIIHNCSHP 58
Query: 66 EDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASK 123
D A E +F +F Y+D LF ++P+KL +MAIDGVAPRAKMNQQRSRRFR +K
Sbjct: 59 NDGDAHFRLSEEQMFTSIFAYVDHLFGKIKPKKLFFMAIDGVAPRAKMNQQRSRRFRTAK 118
Query: 124 DAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLN 183
+A + +R++ E++G KLP D + FDSN ITPGTEFMA LS L+Y+I+ +++
Sbjct: 119 EARE-------IREKAEQKGEKLP---DQKAFDSNCITPGTEFMAKLSEQLRYFINKKIS 168
Query: 184 NDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALAT 243
D W I V+LS +VPGEGEHK+M Y+RL R P YDPN RHCLYGLDADLIML L +
Sbjct: 169 EDSNWRDITVVLSGHDVPGEGEHKVMEYIRLSRAQPDYDPNVRHCLYGLDADLIMLGLLS 228
Query: 244 HEVHFSILR-EVVFTPGQQDK 263
H+ HF +LR EV F P + K
Sbjct: 229 HDPHFCLLREEVKFGPASKSK 249
>gi|303285348|ref|XP_003061964.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456375|gb|EEH53676.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/273 (51%), Positives = 169/273 (61%), Gaps = 38/273 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRWL+E+YPL+ +P+ DNLYLDMNG+IH
Sbjct: 1 MGVPKFYRWLSERYPLLNH--------TCGAGTVPI-----------IDNLYLDMNGVIH 41
Query: 61 PCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H D T DE+ +F Y+D +F MVRPR+LLYMAIDGVAPRAKMNQQRSRR
Sbjct: 42 NCSHGAGTDINTRMTEDEMMAKVFAYLDHIFRMVRPRRLLYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR SA E ++ ++E +G P+ + FDSN ITPGT FMA LS L++Y+
Sbjct: 102 FR-------SALEAKKAKEEAIAKGE---PEPSGEPFDSNCITPGTPFMARLSEHLRFYV 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ DP W+K VILS V GEGEHKIM ++R R PG+DPN HCLYGLDADLIM
Sbjct: 152 MKKQTEDPQWQKATVILSGHEVRGEGEHKIMEHIRWARGEPGWDPNQTHCLYGLDADLIM 211
Query: 239 LALATHEVHFSILREVV-FTPGQQDKCFLCGQP 270
LAL THE HF +LREVV F G++ GQP
Sbjct: 212 LALVTHEPHFCLLREVVKFGGGER------GQP 238
>gi|341882472|gb|EGT38407.1| hypothetical protein CAEBREN_28761, partial [Caenorhabditis
brenneri]
Length = 274
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 188/320 (58%), Gaps = 52/320 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW +E+YP +++VI E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYP-CLSEVINES-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D T +E+F +F YI+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F +++ A + +L + E+ G +P + + FDSN ITPGT FM L L +I
Sbjct: 102 FMSARTA------QTQLDKAIEK-GEVIPTE---KRFDSNCITPGTYFMTRLHDQLDEWI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ +D W+ K+ILS NVPGEGEHKIM Y+R +R YDPNTRHC+YGLDADLIM
Sbjct: 152 KKKSESDSHWQGRKIILSGHNVPGEGEHKIMDYIRTERAKSDYDPNTRHCMYGLDADLIM 211
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L + +HE HFS+LRE V N + + + ++ D V
Sbjct: 212 LGIVSHEPHFSLLREEV------------------TFNTRPRKNEQKNKKPKRTDSDV-- 251
Query: 299 KKPYQFLHIWTLREYLDYEF 318
K + LH+ LREYL +EF
Sbjct: 252 -KTFHLLHLSLLREYLAWEF 270
>gi|62913987|gb|AAH06417.2| XRN2 protein, partial [Homo sapiens]
Length = 580
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 223/421 (52%), Gaps = 51/421 (12%)
Query: 376 GGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPL 435
GGYLT+ +L+RV+ + AVG ED IF+KR R K ++ + +R +P
Sbjct: 5 GGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRD---QPA 61
Query: 436 AQPDSLVPVSRFH-----GSRLASGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGA 490
P ++ GS++AS P + Y+ R+ N S P+
Sbjct: 62 FTPSGILTPHALGSRNSPGSQVASNPRQAAYEM-----RMQNNSSPSISPN--------- 107
Query: 491 TIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERY 550
SF +D + L + R D+ + PE D V+L E GWK+RY
Sbjct: 108 ----------TSFTSDGS------PSPLGGIKRKAEDSDSEPEPE-DNVRLWEAGWKQRY 150
Query: 551 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
Y+ KF+ +E+ R+ VV Y EGLCWV+ YYY+G SW+W+YP+HYAPFASD + +
Sbjct: 151 YKNKFDVDAADEK--FRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGI 208
Query: 611 DQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+N
Sbjct: 209 ADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLN 268
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT 729
GK+Y+WQG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I
Sbjct: 269 GKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILE 328
Query: 730 LDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQV 788
L Q E VEV PEL G+ G S P + SPV + D+ N V
Sbjct: 329 L----YQTGSTEPVEVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTV 380
Query: 789 L 789
+
Sbjct: 381 V 381
>gi|429327281|gb|AFZ79041.1| 5'-3' exoribonuclease 2, putative [Babesia equi]
Length = 1356
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 214/410 (52%), Gaps = 64/410 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNP------NGLE----YDN 50
MG+P+F+RWLAE+YPL+ I +D K+ T N NG +DN
Sbjct: 1 MGIPSFFRWLAERYPLICESQIGSASDKVDTFKLLRSTEANNETYDGLYNGFVAPEGFDN 60
Query: 51 LYLDMNGIIHPCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPR 108
LYLD+NGIIH C H + E +F +F I + +VRP KLLY+A+DGVAP
Sbjct: 61 LYLDVNGIIHNCSHSDANLCQNIHSEEDIFVSIFHCITNIVNIVRPNKLLYLAVDGVAPT 120
Query: 109 AKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 168
AK+NQQR RRFRAS + + + + G + P +D FD ITPGT FM
Sbjct: 121 AKINQQRERRFRASAEMENQILVMNSIDIQ---NGVEEKPNTDEYKFDPLQITPGTPFME 177
Query: 169 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN---- 224
L++ LQ++ + + W+ ++V++S ++VPGEGEHKIM Y+R + ++ N
Sbjct: 178 RLTLHLQFFAQKMIAENKSWKNLQVVVSGSDVPGEGEHKIMEYIRNDKARRHFEANNSSE 237
Query: 225 -------TRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC 277
T HC+YGLDADLI+L+L THE +LRE V + GQ
Sbjct: 238 DVKECKYTSHCIYGLDADLIILSLITHEPFVCLLRERV----------MFGQ-------M 280
Query: 278 EGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLEC---IVD 334
+ K + +++ Y LHI LREY+ + I NP D++ +VD
Sbjct: 281 KNSTKMR----------MMINMSNYVLLHIGILREYILNDL-IENPKLRKDVKIMDRVVD 329
Query: 335 DFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSK 384
DF+ + FVGNDFLPH+ I EG ++ ++ +YK GY+T+ K
Sbjct: 330 DFVLITLFVGNDFLPHLLLANIPEGGLDAVLGIYK-------GYITESIK 372
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDV---VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
WK RYY K K V V Y G+ W+++YYY V SW W + Y P
Sbjct: 459 WKSRYYFAKLGISDQIGDGTLFKSVSTLVSGYFVGIQWILYYYYRSVPSWSWSLSFKYPP 518
Query: 603 FASDL----------------------KDLDQ-FNISFELGHPFKPFNQLLGVFPSASSH 639
F D+ L Q ++ F++ P P QL+ + P +S+
Sbjct: 519 FVHDMLLFLKNARVEYIRKQRHNMSMYSTLSQVMDMKFDISSPITPLEQLMMILPPKASY 578
Query: 640 ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
LP+ K+M DP SP+S +Y T EVDM+ W GIA LP + LL+
Sbjct: 579 LLPDVLGKIMNDPKSPLSRYYLTKIEVDMDNTNVKWGGIALLPAVPHGPLLE 630
>gi|71415930|ref|XP_810014.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874484|gb|EAN88163.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 266
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 166/267 (62%), Gaps = 33/267 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW+AE+ P V+ + P V DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERCPTVITPFRDSPPPV--------------------DNLYLDMNGIIH 40
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D A T + + MF Y+++LF +++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R+R S E RQE +G ++P + D VFDSN ITPGT FM +S QY+
Sbjct: 101 RYR-------SGYELMVARQEAIAQGEEVPDEKD--VFDSNCITPGTNFMVRVSEQFQYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ DP W+ +V+ S + PGEGEHKI+ ++R ++ PGY PN HC+YGLDADL+
Sbjct: 152 ITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADLV 211
Query: 238 MLALATHEVHFSILREVV-FTPGQQDK 263
ML+LATHE HF +LREVV F PGQ+ +
Sbjct: 212 MLSLATHEPHFLLLREVVTFGPGQESR 238
>gi|297611272|ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 161/250 (64%), Gaps = 12/250 (4%)
Query: 169 VLSIALQYYIHLRLNNDPG-WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 227
+++ AL + N +P + + VILSDANVPGEGEHKIMS++R QR GYDPNTRH
Sbjct: 799 IVAYALSVAEEIEGNAEPSTYSEAIVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRH 858
Query: 228 CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG- 286
CLYGLDADLIMLALA+HEVHFSILRE V Q+ P + K K +A
Sbjct: 859 CLYGLDADLIMLALASHEVHFSILREEVLHQNNQENTIPI-TPKTFTSQEAEKFKCRAWF 917
Query: 287 -EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 345
E E + KKPYQFL+IW LREYL+ + +IPNP +D+E ++DDF+F+CF GN
Sbjct: 918 PRITEARPEGKLTKKPYQFLNIWVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGN 977
Query: 346 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP--------SLRRVEHFIQAV 397
DF+PH+P+LEI EGAI+LL+ VYK F +GGY+ D K + R+E F +
Sbjct: 978 DFIPHIPSLEIHEGAIDLLIEVYKTSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHEL 1037
Query: 398 GSYEDRIFQK 407
YE++IF K
Sbjct: 1038 SLYEEKIFLK 1047
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 127/281 (45%), Gaps = 58/281 (20%)
Query: 492 IGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYY 551
+ ++ + + S E D N E + LK++L +K D + + DK+KLG PGWK R++
Sbjct: 1158 VKSSQTDGQVSDEQDITMNTLELRKNLKDILHNKQDLIKTGACKHDKIKLGSPGWKSRFF 1217
Query: 552 EEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLD 611
+EKF+A+T +E A +++ +
Sbjct: 1218 KEKFDAETKDE-------------------------------------IAKLQNEMVTIS 1240
Query: 612 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
F N G+ S ALP Y KLM S I FYP++ ++D +GK
Sbjct: 1241 CF------------LNYANGIL----SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGK 1284
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLS---ASIY 728
RY WQGIAKLPFI++ LL K E L E RRN++ + +F+ S+ L+ A
Sbjct: 1285 RYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQ 1344
Query: 729 TLDEHCKQLKIK-ERVEVKERLNPELSDGMNGYI-SPCAGD 767
T D ++L I E+ L+P+ D NG+ SP D
Sbjct: 1345 TSDCSLQKLPIDPATSEIGGWLSPDDDDFSNGFCGSPIEND 1385
>gi|71030174|ref|XP_764729.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351685|gb|EAN32446.1| hypothetical protein TP02_0165 [Theileria parva]
Length = 1726
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 192/645 (29%), Positives = 292/645 (45%), Gaps = 147/645 (22%)
Query: 43 PNGLEYDNLYLDMNGIIHPCFHP--EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYM 100
P+G +DNLYLD+NGI+H C H + T D++F +F I ++ +VRPRKLLY+
Sbjct: 101 PDG--FDNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIIKIVNIVRPRKLLYL 158
Query: 101 AIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQ---EFEREGRKLPPKSDSQV--- 154
A+DGVAPRAK+ QQR RRFRA+ ++ + L+ E L + D V
Sbjct: 159 AVDGVAPRAKIIQQRERRFRAALESTQQLIISQSLKSTNTHLEPSLHNLQCEPDESVQCE 218
Query: 155 ------------FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPG 202
FD ITPGT FM L++ LQ++ +N + W +K+++S ++VPG
Sbjct: 219 PDESVRDKEEFKFDPIQITPGTAFMERLTVRLQFFALKMINENEQWRNLKIVVSGSDVPG 278
Query: 203 EGEHKIMSYVR---LQRNLPGYDPNTR---------------------HCLYGLDADLIM 238
EGEHKIM Y+R R+ + P T+ HC+YGLDADLI+
Sbjct: 279 EGEHKIMEYIRNNKAHRHSQFHHPRTQLDNRNNTTQLDSVSGERNCVSHCVYGLDADLIV 338
Query: 239 LALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
L+LATHE + +LRE VVF GH+ + + + ++V
Sbjct: 339 LSLATHEPYICLLREQVVF--------------GHMKNSSKLR--------------MMV 370
Query: 298 PKKPYQFLHIWTLREYLDYEF----RIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
Y LH+ LREYL + R+ + P ID +VDDF+F+ FVGNDFLPH+
Sbjct: 371 NMNSYILLHVGILREYLVTDLVEDPRLRSDPSVIDR--VVDDFVFLTMFVGNDFLPHLLM 428
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
I +G N + +Y++ YL++ SLR+ H + + + LH
Sbjct: 429 ASIPDGGFNHTLQIYRE-------YLSE----SLRK--HNLHS-----------KHNLHN 464
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSLVPV----SRFHGSRLASGPSP-------SPYQ 462
H+E KR+ +V D+LV +R+ L + + +P
Sbjct: 465 SHSE--KRDVWLTSGCGEVN----YDNLVLFMTRWARYENRTLQNNLTAELDKTTFNPQN 518
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI--VEAENS-FETDPQENKEEF----- 514
+ V ++ + ++ ++V S A +I ++ NS ETD + ++
Sbjct: 519 NTSKVVNFNSNRVSNFNSNRVSNHSDSAKSKCSITVIDVRNSRIETDLSDFSSKYPGEPR 578
Query: 515 ------------KAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEE 562
K + L + NS N + L N+
Sbjct: 579 TLAEYRNRYYLAKLGISNQLVKCQRSTNSTNSVNSVISLNSV-----ISLNSVNSLNSVN 633
Query: 563 REETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL 607
T +DVV Y G+ W+++YYY GV SW WF P Y PF +D+
Sbjct: 634 TVNTVEDVVREYLHGIQWILYYYYRGVPSWNWFLPCKYPPFVNDI 678
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 615 ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
I+F G P P+ QL+ V P S+H LP + KL+TD +SP+ +YP F+VDM+
Sbjct: 756 ITFVRGRPITPYEQLMLVLPPQSAHFLPSVFSKLITDQDSPLHQYYPLHFDVDMDNTNVP 815
Query: 675 WQGIAKLPFIDEARLLDEVK 694
W GI +P + LL +
Sbjct: 816 WGGITLIPHVPYPLLLQHMN 835
>gi|328854884|gb|EGG04014.1| hypothetical protein MELLADRAFT_28527 [Melampsora larici-populina
98AG31]
Length = 206
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 154/216 (71%), Gaps = 13/216 (6%)
Query: 49 DNLYLDMNGIIHPCFHP--EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVA 106
DNLYLDMNGIIH C HP ED T +++F +F Y++ LF +V+P+KL +MA+DGVA
Sbjct: 1 DNLYLDMNGIIHNCSHPNEEDAHFRITEEQIFLAIFGYLEHLFALVKPQKLFFMAVDGVA 60
Query: 107 PRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 166
PRAKMNQQRSRRFR +KD D + + ER+G LP ++ FDSN ITPGT F
Sbjct: 61 PRAKMNQQRSRRFRTAKDRKD-------MIDKAERKGETLP---STEAFDSNCITPGTPF 110
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
MA LS L+Y+I+ +++ D W+ ++V+ S +VPGEGEHKIM Y+RL + P Y+PN R
Sbjct: 111 MARLSEQLKYFINQKVSTDSAWQGVQVVFSGHDVPGEGEHKIMEYIRLAKAQPDYNPNVR 170
Query: 227 HCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQ 261
HCLYGLDADLIMLAL +H+ HF +LR EV F P ++
Sbjct: 171 HCLYGLDADLIMLALLSHDPHFCLLREEVKFGPARK 206
>gi|428182412|gb|EKX51273.1| hypothetical protein GUITHDRAFT_157234 [Guillardia theta CCMP2712]
Length = 252
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 123/255 (48%), Positives = 164/255 (64%), Gaps = 30/255 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+RWL+E+YPL+ D+ G P E+DNLYLDMNGIIH
Sbjct: 1 MGIPKFFRWLSERYPLINQDIKA-------GTIFP-----------EFDNLYLDMNGIIH 42
Query: 61 PCFHPED-RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC H D T +++F + ++D L +VRP++LL++A+DG APRAKMNQQR RRF
Sbjct: 43 PCTHGNDGEVVRMTENDMFVAIGKFVDELMKVVRPQRLLFLAVDGCAPRAKMNQQRQRRF 102
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
RA+ + + S L ER G ++P FDSN ITPGT+FMA L+ L Y+I
Sbjct: 103 RAASELSKS------LMNARER-GEEIP----QDPFDSNCITPGTQFMARLTNFLNYFIQ 151
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++ +DP W K K+ILS A VPGEGEHKIM Y+R +++ + N RHC++G DADLIML
Sbjct: 152 SKIKDDPIWAKAKIILSGAEVPGEGEHKIMEYIRREKSQESWPSNLRHCIFGNDADLIML 211
Query: 240 ALATHEVHFSILREV 254
+LATHE HF++LRE
Sbjct: 212 SLATHEPHFALLRET 226
>gi|84995660|ref|XP_952552.1| 5'-3' exoribonuclease 2 [Theileria annulata strain Ankara]
gi|65302713|emb|CAI74820.1| 5'-3' exoribonuclease 2, putative [Theileria annulata]
Length = 1467
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 219/412 (53%), Gaps = 66/412 (16%)
Query: 1 MGVPAFYRWLAEKYPLVV------------ADVIEEEPVVIDGVKIPVDTSKPNPNGLEY 48
MG+P+F+RWLAE+YPL+ A ++ + P ++ + P+G +
Sbjct: 1 MGIPSFFRWLAERYPLICESQDVSTADKGDAFMLLKNPESFRDKFENLNLNLTPPDG--F 58
Query: 49 DNLYLDMNGIIHPCFHP--EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVA 106
DNLYLD+NGI+H C H + T D++F +F I + +VRP+KLLY+A+DGVA
Sbjct: 59 DNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIINIVNIVRPKKLLYLAVDGVA 118
Query: 107 PRAKMNQQRSRRFRASKDAADSAAEEERLR-QEFEREGRKLPPKSDSQVFDSNVITPGTE 165
PRAK+ QQR RRFRA+ ++ + L+ E E L K + FD ITPGT
Sbjct: 119 PRAKIIQQRERRFRAAMESTQQQIILDSLKDMENGEESADLNEKEEEFKFDPIQITPGTA 178
Query: 166 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD--- 222
FM L+ LQ++ +N + W +K+++S ++VPGEGEHKIM Y+R + + +
Sbjct: 179 FMERLTSRLQFFALKMINENQQWRNLKIVVSGSDVPGEGEHKIMEYIRNDKAIRHAEYEK 238
Query: 223 ------------PNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQ 269
P HC+YGLDADLI+L+LATHE + +LRE VVF
Sbjct: 239 MIRNGNKEKKGVPYVSHCVYGLDADLIVLSLATHEPYICLLREQVVF------------- 285
Query: 270 PGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDL 329
GH+ + + + ++V Y LHI LREYL + + + DL
Sbjct: 286 -GHMKNSSKMR--------------MMVNMNNYILLHIGILREYLVADL-VEDLRLRSDL 329
Query: 330 EC---IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF-RALGG 377
+VDDF+F+ FVGNDFLPH+ I EG N ++ +Y++ +LGG
Sbjct: 330 NVMDRVVDDFVFLTMFVGNDFLPHIHMANIPEGGFNHMLQIYREYLVESLGG 381
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 95/200 (47%), Gaps = 32/200 (16%)
Query: 524 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNA-----KTPEEREETRKDVVLRYTEGL 578
D SD FN+ P E + + ++ RYY K K E + +DVV Y G+
Sbjct: 492 DLSD-FNAKYPNEPQTLVD---YRNRYYLAKMGISNQLIKCNEGSVNSVEDVVREYLHGV 547
Query: 579 CWVMHYYYEGVCSWQWFYPYHYAPFASDL-------------KDLDQFN----------I 615
W+++YYY GV SW W P Y PF +D+ D QF+ I
Sbjct: 548 QWILYYYYRGVPSWNWHLPCKYPPFVNDMLLFLKNTKRKLTMTDKAQFSYPLLLSDVLHI 607
Query: 616 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 675
SF G P PF QL+ V P S+H LP + +L+TD SP+ +YP F+VDM+ W
Sbjct: 608 SFVKGKPITPFEQLMLVLPPQSAHFLPSVFSRLITDQESPLHQYYPLHFDVDMDNTNVPW 667
Query: 676 QGIAKLPFIDEARLLDEVKK 695
GI +P + LL ++ K
Sbjct: 668 GGITLIPLVPYPLLLQQMNK 687
>gi|71416427|ref|XP_810246.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874749|gb|EAN88395.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 230
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/258 (46%), Positives = 160/258 (62%), Gaps = 32/258 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW+AE+ P V+ + P V DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERCPTVITPFRDSPPPV--------------------DNLYLDMNGIIH 40
Query: 61 PCFHPEDRPAPT---TFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H D A T + + MF Y+++LF +++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R+R S E RQE +G ++P + D VFDSN ITPGT FM +S QY+
Sbjct: 101 RYR-------SGYELMVARQEAIAQGEEVPDEKD--VFDSNCITPGTNFMVRVSEQFQYF 151
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +++ DP W+ +V+ S + PGEGEHKI+ ++R ++ PGY PN HC+YGLDADL+
Sbjct: 152 ITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADLV 211
Query: 238 MLALATHEVHFSILREVV 255
ML+LATHE HF +LREVV
Sbjct: 212 MLSLATHEPHFLLLREVV 229
>gi|224587081|gb|ACN58600.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 575
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 173/271 (63%), Gaps = 14/271 (5%)
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 581
++ K++ +S+ ED V+L E GWK+RYY+ KF+ ++ + RK VV+ Y EGLCWV
Sbjct: 108 VKRKAEDSDSEPDPEDNVRLWEDGWKQRYYKTKFDVDATDD--DFRKKVVMSYVEGLCWV 165
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 640
+ YYY+G SW+W++P+HYAPFASD KD+ FELG PFKP QL+GVFP+AS +
Sbjct: 166 LRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFTDFELGTKPFKPLEQLMGVFPAASGNF 225
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LPE +R LM++P S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL + ++ L
Sbjct: 226 LPETWRSLMSNPESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPNL 285
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
+ EE +RNS+ +DMLFV SH ++ + ++L E E E + EL G+ G
Sbjct: 286 SPEENKRNSLGSDMLFVGKSH-------SICDFIQELYRGESHEGTE-MPAELCHGIQGT 337
Query: 761 ISPCAGDPHPP--VFRSPVASMEDIMGNQVL 789
++ GDP P SP+ + DI N +
Sbjct: 338 LN-LDGDPILPDKPVESPIPMLRDIAQNSAI 367
>gi|7019942|dbj|BAA90934.1| unnamed protein product [Homo sapiens]
Length = 560
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/270 (46%), Positives = 168/270 (62%), Gaps = 12/270 (4%)
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 581
++ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 102 IKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 159
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 640
+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS +
Sbjct: 160 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNF 219
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 220 LPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 279
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
T EE RRNS+ D+LFV HPL I L Q E VEV PEL G+ G
Sbjct: 280 TPEETRRNSLGGDVLFVGKHHPLHDFILEL----YQTGSTEPVEVP----PELCHGIQGK 331
Query: 761 ISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
S P + SPV + D+ N V+
Sbjct: 332 FSLDEEAILPDQIVCSPVPMLRDLTQNTVV 361
>gi|13278447|gb|AAH04028.1| Xrn2 protein [Mus musculus]
gi|148696567|gb|EDL28514.1| 5'-3' exoribonuclease 2, isoform CRA_b [Mus musculus]
Length = 561
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 158/242 (65%), Gaps = 11/242 (4%)
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 581
++ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 102 IKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 159
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 640
+ YYY+G SW+W+YP+HYAPFASD + + + FE G PFKP QL+GVFP+AS +
Sbjct: 160 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMGVFPAASGNF 219
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 220 LPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 279
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
T EE RRNS+ D+LFV HPL I L Q E V+V PEL G+ G
Sbjct: 280 TPEENRRNSLGGDVLFVGKLHPLRDFILEL----YQTGSTEPVDVP----PELCHGIQGT 331
Query: 761 IS 762
S
Sbjct: 332 FS 333
>gi|157817638|ref|NP_001102066.1| 5'-3' exoribonuclease 2 [Rattus norvegicus]
gi|149041187|gb|EDL95120.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 561
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 158/242 (65%), Gaps = 11/242 (4%)
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 581
L+ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 102 LKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 159
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 640
+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS +
Sbjct: 160 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKPFKPLEQLMGVFPAASGNF 219
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP +RKLM+DP+S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 220 LPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 279
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
T EE RRNS+ +D+LFV HPL I L Q E V+V PEL G+ G
Sbjct: 280 TPEENRRNSLGSDVLFVGKVHPLHDFILEL----YQTGSTEPVDVP----PELCHGIQGK 331
Query: 761 IS 762
S
Sbjct: 332 FS 333
>gi|403221749|dbj|BAM39881.1| 5'-3' exoribonuclease 2 [Theileria orientalis strain Shintoku]
Length = 1374
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 225/443 (50%), Gaps = 103/443 (23%)
Query: 1 MGVPAFYRWLAEKYPLVVAD-------------VIEEEPVVIDGVKIPVDTSKPNPNGLE 47
MG+P+F+RWLAE+YPL+ +++ D P+ T +P P+G
Sbjct: 1 MGIPSFFRWLAERYPLICESQYVTTSDKGDAFKLLKSPETFKDSFNEPLFTYRP-PDG-- 57
Query: 48 YDNLYLDMNGIIHPCFHP--EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGV 105
+DNLYLD+NGI+H C H + T+ D++F +F I L +VRP+ LLY+A+DGV
Sbjct: 58 FDNLYLDVNGIVHNCSHSIADLCQNITSEDDIFVSIFQCIINLVNIVRPKSLLYLAVDGV 117
Query: 106 APRAKMNQQRSRRFRASKDAADSAAEEERLR----QEFEREGRKLPPKSDSQVFDSNVIT 161
APRAK+ QQR RRFR++ +A E L Q+ + +G + + + FD IT
Sbjct: 118 APRAKIIQQRERRFRSASEATIQQLILESLTELGDQDEDTQGEE--TQKEEFKFDPIQIT 175
Query: 162 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVR-------- 213
PGT FM L+ LQ++ +N + W +K+++S + VPGEGEHKIM Y+R
Sbjct: 176 PGTAFMERLTTRLQFFALKMINENELWRNLKIVVSGSEVPGEGEHKIMEYIRNDKARRHA 235
Query: 214 -----LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLC 267
+ R PG P+ HC+YGLDADLI+L+LATHE + +LRE VVF
Sbjct: 236 EFESEVHRREPGDTPHISHCVYGLDADLIVLSLATHEPYICLLREQVVF----------- 284
Query: 268 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI 327
GH+ K + + + Y+
Sbjct: 285 ---GHM-------------------------KNSSKLRMMVNMNSYI------------- 303
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 387
++ +VDDF+F+ FFVGNDFLPH+ I EG +N L+ +Y++ YL + K
Sbjct: 304 -MDRVVDDFVFLTFFVGNDFLPHLLLANIPEGGLNELLQIYRE-------YLDESFKSGP 355
Query: 388 RRVEHFIQAVGSYEDRIFQKRAR 410
AVG++++ + Q+ AR
Sbjct: 356 SST-----AVGNHQNTLPQRNAR 373
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 613 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
+I F+ G P P+ QL+ V P S+H LP + L+T+ SP+ +YP F+VDM+ +
Sbjct: 529 LDIKFDKGKPITPYEQLMLVLPRQSAHFLPSVFSALITEQESPLHQYYPIHFDVDMDNTK 588
Query: 673 YSWQGIAKLPFIDEARLL 690
W GI LP + + +L
Sbjct: 589 VPWGGITLLPSVPYSLML 606
>gi|308081609|ref|NP_001182843.1| uncharacterized protein LOC100501093 [Zea mays]
gi|238007642|gb|ACR34856.1| unknown [Zea mays]
Length = 435
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/160 (68%), Positives = 128/160 (80%)
Query: 630 LGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+GVFP+AS+HALP YR+LMTDPNSPI DFYPTDFEVDMNGKR+SWQGIAKLPFI+E RL
Sbjct: 1 MGVFPAASAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRL 60
Query: 690 LDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERL 749
L E+KK+E TLT EEARRNS M +MLFV +H LS IY+L+ L K+R +KE+L
Sbjct: 61 LAEIKKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIKEKL 120
Query: 750 NPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
+P S GMNGYI+ C GDP PPVFRSPV +EDIM NQV+
Sbjct: 121 DPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQVI 160
>gi|395510133|ref|XP_003759335.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 349
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 167/270 (61%), Gaps = 12/270 (4%)
Query: 522 LRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 581
++ K++ +S+ ED V+L E GWK+RYY+ KF+ +E+ R+ VV Y EGLCWV
Sbjct: 22 IKRKAEDSDSEPEPEDNVRLWESGWKQRYYKNKFDVDAADEK--FRRKVVQSYVEGLCWV 79
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHA 640
+ YYY+G SW+W+YP+HYAPFASD + + FE G PFKP QL+GVFP+AS +
Sbjct: 80 LRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTRPFKPLEQLMGVFPAASGNF 139
Query: 641 LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTL 700
LP +RKLM+DP S I DFYP DF +D+NGK+Y+WQG+A LPF+DE RL ++++ L
Sbjct: 140 LPPSWRKLMSDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDL 199
Query: 701 TEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGY 760
T +E RRNS+ D++FV HPLS + +L E + L PEL G+ G
Sbjct: 200 TPDETRRNSLGGDVMFVGKHHPLS-------DFLSELYKTGSTEAVD-LPPELCHGIQGK 251
Query: 761 ISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
++ P + SPV + D+ N +
Sbjct: 252 LTLHEEAILPDQIVYSPVPVLRDLTQNTAI 281
>gi|399216467|emb|CCF73155.1| unnamed protein product [Babesia microti strain RI]
Length = 1209
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 201/376 (53%), Gaps = 45/376 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVADV---IEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNG 57
MGV F+R++AE+YPL+ + + + + D++ P +D LYLDMNG
Sbjct: 1 MGVGHFFRYIAERYPLICQQISRSFSDNEAALS--EFYSDSTLP------FDALYLDMNG 52
Query: 58 IIHPCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
I+H C + + ++ +++ +F YI ++ + +P+KLLY+A+DGVAP+AKMNQQR
Sbjct: 53 IVHICAYSNKEFSRDISSLGDIWLSIFQYITKIVNLAKPKKLLYLAVDGVAPKAKMNQQR 112
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
+RRFR+ ++ A E + F D VFD ITPGT+FM + ++
Sbjct: 113 TRRFRSVAESEQRANLNEECAKYFANGYDDPVRGKDGFVFDPTCITPGTKFMHEFTTQIE 172
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
Y+ + D W K+KVI+S ANVPGEGEHKI Y+ RN G + HC+YGLDAD
Sbjct: 173 KYVAKMIKADTYWSKLKVIVSGANVPGEGEHKIAEYI---RNTKGQSIKS-HCIYGLDAD 228
Query: 236 LIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
LIML+L HE H +LRE ++FT ++ P K D
Sbjct: 229 LIMLSLLFHEPHICLLRESIIFTNMMKNNITYRLLP--------------------KDDN 268
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
V+ LHI LREYL E + E + +DDFI +C VGNDFLPH+ +
Sbjct: 269 FVL-------LHIRVLREYLARELLPVHMLKEPFISRAIDDFILICLLVGNDFLPHLKFV 321
Query: 355 EIREGAINLLMAVYKK 370
+I + +LM +Y++
Sbjct: 322 QIPNRGLTILMKLYRE 337
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
W RYY AK E++R+++V +Y G+ WV++YYY V W W+ P Y P A
Sbjct: 418 WASRYYY----AKMGLTDEQSREEIVKQYLIGIQWVLYYYYRCVPDWNWYLPCPYPPLAQ 473
Query: 606 DLKDL--------------DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
D+ + I FELGHP PF QLL V P SS+ LP+ L+TD
Sbjct: 474 DMSKILKRTIQKTECKRLSKALGIKFELGHPCTPFEQLLSVLPPKSSYLLPKQLEALITD 533
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
P S + ++PT F+VDM+ W G+ LP ID
Sbjct: 534 PKSGLESYFPTQFDVDMDDTLVPWGGVTLLPTID 567
>gi|167516040|ref|XP_001742361.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778985|gb|EDQ92599.1| predicted protein [Monosiga brevicollis MX1]
Length = 290
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 158/256 (61%), Gaps = 33/256 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP ++ L E+YP ++ EE P+ E+DN YLD NGI+H
Sbjct: 1 MGVPRLFKLLVERYPAILRGT-EEHPMP------------------EFDNFYLDFNGIVH 41
Query: 61 PCFHPED---RPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C H + R + ++ +F I LF ++RP++LLY+AIDGVAPRAKM QQR R
Sbjct: 42 NCTHGNEGDVRKSSQVTQDMMMAIFHEIQTLFDIIRPQRLLYIAIDGVAPRAKMQQQRQR 101
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RF+A++D+ AA++ + P + FDSN ITPGTEFM +L L Y+
Sbjct: 102 RFKATRDS--EAAQQITA---------VVAPPMPEEHFDSNCITPGTEFMDLLQRHLVYF 150
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I +L D W K++V+LS VPGEGEHKIM ++R ++ P YDPNTRHCL+GLDADLI
Sbjct: 151 IQRKLEEDDDWRKVEVVLSGHQVPGEGEHKIMDFIRSLKSQPAYDPNTRHCLHGLDADLI 210
Query: 238 MLALATHEVHFSILRE 253
MLALATHE HF+ILRE
Sbjct: 211 MLALATHEPHFAILRE 226
>gi|147862842|emb|CAN82968.1| hypothetical protein VITISV_021857 [Vitis vinifera]
Length = 1122
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 132/173 (76%), Gaps = 2/173 (1%)
Query: 413 QRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECVGRLDN 472
+R AERIKREKAQARRGDD +P +P+ LVPVSR+HGSRLAS P+PSPYQQ E +
Sbjct: 927 KRQAERIKREKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQHEIKSKQSG 986
Query: 473 GKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSD 532
G+ GR KV R SSGAT+GAAIVEAEN ET+ +NK+E KAKLKELLR+KSD FNS
Sbjct: 987 TSGSQGR--KVARFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLREKSDLFNSK 1044
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYY 585
NPEEDKVKLGE GWKERYYEEKF+ KTPEE+E R DV L C+++ Y
Sbjct: 1045 NPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAIRNDVFLSLELFDCYLVWLY 1097
>gi|321466088|gb|EFX77085.1| hypothetical protein DAPPUDRAFT_24169 [Daphnia pulex]
Length = 288
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 184/360 (51%), Gaps = 77/360 (21%)
Query: 47 EYDNLYLDMNGIIHPC-----FHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMA 101
EYDNLY+D+N I+H C FH D + + +F+ ID++F +VRPRKLLY+A
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHNADDRER----RIMEILFEKIDQIFSIVRPRKLLYVA 56
Query: 102 IDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVIT 161
+DGVAPRAK QQR RRF SK P D FD N ++
Sbjct: 57 LDGVAPRAKRTQQRIRRFGRSK------------------------PNQDE--FDGNCVS 90
Query: 162 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 221
PGT FM LS L Y+ +L+NDP W+ I VI SD+NVPGEGEHKI ++R QR P +
Sbjct: 91 PGTSFMCTLSKNLMLYVDRKLSNDPQWKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCH 150
Query: 222 DPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKA 281
DP T+H + G DADLI+L LA+HE + ++LR G P
Sbjct: 151 DPVTKHVICGNDADLILLGLASHETNVTLLR---------------GDPN---------- 185
Query: 282 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 341
+ + F+ I LRE L+ EFR + PF+ LE IVDD+IF+C
Sbjct: 186 -----------------SRKWIFVGIHILRECLNEEFRGSDFPFDYHLERIVDDWIFLCI 228
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
+GNDFLP + + + L+ + K + +LT + +V+H + +G E
Sbjct: 229 LLGNDFLPSFQIFKNPDRTLTHLVRICKDAYNKNQDWLTHNGSINSVQVKHIMSELGRME 288
>gi|321466089|gb|EFX77086.1| hypothetical protein DAPPUDRAFT_31800 [Daphnia pulex]
Length = 288
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 184/360 (51%), Gaps = 77/360 (21%)
Query: 47 EYDNLYLDMNGIIHPC-----FHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMA 101
+YDNLY+D+N I+H C FH D + + +F+ ID++F +VRPRKLLY+A
Sbjct: 1 DYDNLYIDLNEIVHNCVRAARFHKADDRER----RIMEILFEKIDQIFSIVRPRKLLYVA 56
Query: 102 IDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVIT 161
+DGVAPRAK QQR RRF SK P D FD N ++
Sbjct: 57 LDGVAPRAKRTQQRIRRFGRSK------------------------PNQDE--FDGNCVS 90
Query: 162 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 221
PGT FM LS L Y+ +L+NDP W+ I VI SD+NVPGEGEHKI ++R QR P +
Sbjct: 91 PGTSFMCTLSKNLMLYVDRKLSNDPQWKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCH 150
Query: 222 DPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKA 281
DP T+H + G DADLI+L LA+HE + ++LR G P
Sbjct: 151 DPVTKHVICGNDADLILLGLASHETNVTLLR---------------GDPN---------- 185
Query: 282 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 341
+ + F+ I LRE L+ EFR + PF+ LE IVDD+IF+C
Sbjct: 186 -----------------SRKWIFVGIHILRECLNEEFRGSDFPFDYHLERIVDDWIFLCI 228
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
+GNDFLP + + + L+ + K + +LT + +V+H + +G E
Sbjct: 229 LLGNDFLPSFQIFKNPDRTLTHLVRICKDAYNKNQDWLTHNGSINSVQVKHIMSELGRME 288
>gi|367024791|ref|XP_003661680.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
gi|347008948|gb|AEO56435.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
Length = 1055
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 167/266 (62%), Gaps = 41/266 (15%)
Query: 55 MNGIIHPCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN 112
MNGIIH C H +D T +E+F +F+YI+ LF ++P+KL +MA+DGVAPRAKMN
Sbjct: 1 MNGIIHNCTHKDSDDVHFRLTEEEMFIAIFNYIEHLFSKIKPKKLFFMAVDGVAPRAKMN 60
Query: 113 QQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSI 172
QQR+RRFR + DA E+ R++ REG++LP + + FDSN ITPGTEFMA LS
Sbjct: 61 QQRARRFRTALDA-------EKAREKAIREGKELPKE---EPFDSNCITPGTEFMAKLSQ 110
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
L+Y+I+ +++ D W++ +++LS VPGEGEHKIM Y+R R P Y PN RHCLYGL
Sbjct: 111 QLKYFINKKVSEDRAWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSPNVRHCLYGL 170
Query: 233 DADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKG 292
DADLIML L +H+ HF +LRE V T G+Q AK K+ E + +
Sbjct: 171 DADLIMLGLLSHDPHFCLLREEV-TFGRQ-------------------AKHKSKELEHQN 210
Query: 293 DEVVVPKKPYQFLHIWTLREYLDYEF 318
+ LH+ +REYL+ ++
Sbjct: 211 ---------FYLLHLCIVREYLELDW 227
>gi|358378678|gb|EHK16359.1| hypothetical protein TRIVIDRAFT_8924, partial [Trichoderma virens
Gv29-8]
Length = 189
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 141/189 (74%), Gaps = 6/189 (3%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVI-DGVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MG+PA +RWL+ KYP +++ VIE+ P+ DG+ IPVDT++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEQTPITTEDGITIPVDTTQPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDRPAP +E+ +F Y DR+ MVRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-----FDSNVITPGTEFMAVLSIAL 174
R++++A + +++ L + +R+ + P +DS+ FDSN ITPGT FM +L+++L
Sbjct: 121 RSAREAQEKEEDKKALIELLKRQNGGVFPAADSETVVKKAFDSNSITPGTPFMDILALSL 180
Query: 175 QYYIHLRLN 183
+Y+ +LN
Sbjct: 181 RYWCQYKLN 189
>gi|324502945|gb|ADY41287.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 578
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 196/389 (50%), Gaps = 44/389 (11%)
Query: 378 YLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQ 437
YLT+ + RV+ + +G ED IF+ R Q+ + +R KA+ RR E A
Sbjct: 19 YLTNQGDVYMDRVQKILNGLGEVEDEIFKSR---QQKELQFRERNKAKRRR----ERAAT 71
Query: 438 PDSLVPVSRFHGSRLA-SGPSPSPYQQSECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI 496
+ +PV GS LA P + ++ RL ++ SS A
Sbjct: 72 TPAYIPV---RGSLLAPQANGPVSFSGADTR-RLARDARVQAMEYQ--NASSKANTVVTT 125
Query: 497 VEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEK 554
V+A + P++ K E +SD+ EE D+V+L E GWKERYY K
Sbjct: 126 VQA-----SGPRKRKME----------------DSDSEEEVYDEVRLWETGWKERYYRSK 164
Query: 555 FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN 614
F + R V Y EGLCWV+ YYY+G SW W++PYHYAPFASD + QF
Sbjct: 165 FEVDGND--IAFRHKVAWAYVEGLCWVLKYYYQGCVSWNWYFPYHYAPFASDFDTISQFK 222
Query: 615 ISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
F PFKP QL+ VFP+AS LPE ++ LMT SPI DFYP DF+VD+NGK+Y
Sbjct: 223 PDFSAHTEPFKPLEQLMAVFPAASKKHLPESWQDLMTSEESPIIDFYPEDFQVDLNGKKY 282
Query: 674 SWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEH 733
+WQG+A LPF+DE RLL+ + + L + E RNS D +FV HP S + L E
Sbjct: 283 AWQGVALLPFVDEHRLLETLATVYDKLDDFERERNSRGPDRIFVGRKHPFSKFLQQLYEG 342
Query: 734 CKQLKIKERVEVKERLNPELSDGMNGYIS 762
E ++P ++G+ G +
Sbjct: 343 S----CPENEGTLIAIDPSFTNGLAGSVG 367
>gi|401828471|ref|XP_003887949.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392998957|gb|AFM98968.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 656
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 218/454 (48%), Gaps = 77/454 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RWL + + +++E V D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHREAIHNILENPSV---------------------DCLYLDFNAIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P ++++ + D+ID + + VRPRKLLY+AIDGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLGSEEEIEKDLYKTVGDFIDYILLKVRPRKLLYIAIDGVAPRAKLSHQRARRYK 99
Query: 121 ASKDAADSAAEEERLRQEFE----REGR---------------------------KLPPK 149
++ + +A + L+ +F +EG+ L
Sbjct: 100 SALGKKEGSAIKPTLQTDFAVQPPKEGKDEGEDGEFTGESSLYDKFTAEDISESSSLAVD 159
Query: 150 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
+++ FD N ITPGT FM L L YI +L++DPG +++I S VPGEGE KIM
Sbjct: 160 VEAEKFDLNCITPGTPFMERLHSVLISYIQYKLSSDPGASHLRIIYSSYLVPGEGEQKIM 219
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK---CFL 266
S++R Q + N H +Y D DL+ L L+ H I+R+ F+P + K C
Sbjct: 220 SFIRNQESAAR---NDVHMIYSPDGDLMFLGLSLHRSKVLIMRD-YFSPNRAQKKKVCTK 275
Query: 267 CGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE 326
CG+ GH C V + +++I LR L EFR
Sbjct: 276 CGRTGHSNEECG-----------------VFTNYHFVYVNISELRTRLIREFRRYTAQ-R 317
Query: 327 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS 386
E I++D+IF+CF +GNDF+P +P L+IR +I + + K F Y+T S
Sbjct: 318 FSEERILNDWIFLCFLLGNDFVPSIPCLDIRFHSIETITEIMMKNFSETKSYITCNSAID 377
Query: 387 LRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
+ +++F + S ED ++ ++++ R E +K
Sbjct: 378 YQVLKNFYTILASKEDSLYYRKSQSLDRFREELK 411
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 496 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF 555
+ E+S ++ + F+ +LK++ N +K+ + K +YY K
Sbjct: 388 LASKEDSLYYRKSQSLDRFREELKDM----------PNITYEKIPIHTKTGKIQYYASKL 437
Query: 556 NAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNI 615
NA T E + V Y +GL WV YY G W W+YPYH+AP A+DL L I
Sbjct: 438 NASTESEI----RSVCYEYVKGLYWVYSYYILGSTGWDWYYPYHFAPLAADLSKLSISEI 493
Query: 616 SFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 675
G P +P QLL V P S +P+ + + + DFYP D + DM K + W
Sbjct: 494 RINPGLPLRPLEQLLAVLPPMSKSMVPKALQPIFNE----YKDFYPEDVKTDMFDKVFLW 549
Query: 676 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
Q + LPF+D +L E ++L E+ RN D+ F
Sbjct: 550 QEVVILPFVDFRSILSENASKFNSLEYEDLNRNLRSLDLFFT 591
>gi|157111508|ref|XP_001651597.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108868328|gb|EAT32553.1| AAEL015316-PA, partial [Aedes aegypti]
Length = 188
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 140/185 (75%), Gaps = 1/185 (0%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+ + +E++ G + D ++PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKQTDEHGNPLYDDMTQPNPNKVEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP DE+ +F+ IDRL +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIALQYYIH 179
ASK+AA+ AAE +++R E +G LPP+ + FDSN ITPGT FM LS LQYY+H
Sbjct: 121 ASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH 180
Query: 180 LRLNN 184
R+NN
Sbjct: 181 DRMNN 185
>gi|393910763|gb|EJD76028.1| hypothetical protein LOAG_16951 [Loa loa]
Length = 159
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 119/154 (77%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL KYP V+ D +EE+P ++GV+IPV+T PNPN E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVIVDAVEEKPRDMNGVRIPVNTVDPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDRP+P T +E+F +F+YIDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPSPKTEEEMFTLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV 154
ASK+A + + R E EG LPP+ +
Sbjct: 121 ASKEAIEKVEQIAETRSRLESEGYPLPPEKKRSI 154
>gi|145506154|ref|XP_001439043.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406216|emb|CAK71646.1| unnamed protein product [Paramecium tetraurelia]
Length = 1199
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 208/413 (50%), Gaps = 61/413 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FY WL+++YP+ K P +G + D LYLDMN +I+
Sbjct: 1 MGVPNFYSWLSKRYPMC---------------KYPF----TKHHGHQIDFLYLDMNQVIY 41
Query: 61 PCFHPE----DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRS 116
C + D + + ++ + +YID + +V P+ ++Y+ DGVAPRAK NQQR
Sbjct: 42 KCATNQTILKDYMIEKSIESLWTSILNYIDTIINLVDPQLVIYLTFDGVAPRAKANQQRQ 101
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RRF +SK A +++Q ++L + + F +N IT GTEFM L+ +++
Sbjct: 102 RRFASSKGDA-------KIKQLL----KQLDLEQQNHTFKNNQITAGTEFMYELNEQVKF 150
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I+ + D + ++VI S ++VPGEGEHKI+ ++R +N ++P+ HC+Y DADL
Sbjct: 151 FINRKFKEDEKYANLQVIFSGSDVPGEGEHKILEFMRGIKNQQNFNPDWTHCIYSADADL 210
Query: 237 IMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVV 296
IML L H + SI+RE Q + KR
Sbjct: 211 IMLGLGIHLKYVSIIRE---------------QSNMDQIKTQIACKRS------------ 243
Query: 297 VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
+ ++ +++ ++EYLD E++ +++ ++DDF+ + F +GNDFLP + +I
Sbjct: 244 IETVKFELINLQIVKEYLDLEYKTIQMKIPYNIDRVIDDFLLLFFLIGNDFLPRVYCFDI 303
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
++G + LL+ +K Y+T + + + +Q + +E + +KR
Sbjct: 304 KQGTVELLIDTFKSFLEQCDEYVTQDGWINWKSMSLLVQVLSKFEIKAIEKRV 356
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 12/181 (6%)
Query: 547 KERYYEEK--FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
++ +YE K + T E ++E K ++L+Y EG +V+ YYY GV SW+W+Y Y+Y+P
Sbjct: 401 RKLFYESKCQIDIDTEEGKKELDK-IILKYLEGFQFVLSYYYHGVPSWEWYYSYYYSPMC 459
Query: 605 SDLKDLDQFN----ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS--- 657
DL N I F P+ PF QLL + P +++ LP +R L D SP+
Sbjct: 460 FDLCVYLSKNQIEKIQFGQSKPYDPFQQLLLILPPHNANLLPAPFRGLY-DLESPLRKPF 518
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHT-LTEEEARRNSIMADMLF 716
D+YP ++E+D G + Q I K+PF++ L+ E KKI+ + L E E R+ LF
Sbjct: 519 DYYPDEYEIDPFGAIWEHQFICKVPFMNSDLLISEYKKIDQSQLNELERERSKFGHAYLF 578
Query: 717 V 717
V
Sbjct: 579 V 579
>gi|351706558|gb|EHB09477.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 176
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 131/176 (74%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+ WL+ KY ++ + +EE+P +G+KIPVD SKPNPN +E+D LYLDMNGIIH
Sbjct: 1 MGVPAFFCWLSSKYLSIIVNCVEEKPPKCNGIKIPVDASKPNPNDVEFDKLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P +E+ +F+Y+D LF +VR R+LLYMAIDGVAPRAKMNQQ SRRFR
Sbjct: 61 PCTHPEDKPTSKKEEEMMVAIFEYLDGLFNIVRARRLLYMAIDGVAPRAKMNQQLSRRFR 120
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
ASK+ ++A E++ +R+E +G LPP+ + FDS TPGTEFM L+ +L Y
Sbjct: 121 ASKEGMEAAMEKQHVREETLAKGGYLPPEQIKERFDSYCTTPGTEFMDNLAKSLCY 176
>gi|396082120|gb|AFN83732.1| 5-3 exoribonuclease [Encephalitozoon romaleae SJ-2008]
Length = 656
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 216/454 (47%), Gaps = 77/454 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RWL + + + ++E V D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHKVAIHSILENPSV---------------------DCLYLDFNAIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P ++ + + D+ID + + RPRKLLY+AIDGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLESEEEIERDLHKTVGDFIDYILLKARPRKLLYIAIDGVAPRAKLSHQRARRYK 99
Query: 121 ASKDAADSAAEEERLRQEF--------EREGR-----------------------KLPPK 149
++ + ++ + + EF + EGR L
Sbjct: 100 SALGKKEGSSVKSISKTEFAPQSEKERKEEGRDEEFTGESSLYDKFIVEDISESSSLAVD 159
Query: 150 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
+++ FD N ITPGT FM L L YI +L+NDPG +K+I S VPGEGE KIM
Sbjct: 160 VETENFDLNCITPGTPFMERLHNVLISYIQYKLSNDPGVSHLKIIYSSYLVPGEGEQKIM 219
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQ---QDKCFL 266
S++R Q ++ N H +Y D DL+ L L+ H I+R+ F+P + + C
Sbjct: 220 SFIRSQESVAR---NDVHMIYSPDGDLMFLGLSLHRSKVLIMRD-YFSPNKARMKKTCAK 275
Query: 267 CGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE 326
C + GH C V + +++I LR L EFR
Sbjct: 276 CKRSGHSDEECG-----------------VFTNYHFVYVNISELRIRLIREFRRYTTQ-R 317
Query: 327 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS 386
+ E I++D+IF+CF +GNDF+P P L+IR +I + + K F Y+T S +
Sbjct: 318 FNEERILNDWIFLCFLLGNDFVPPTPCLDIRFHSIETITEIMAKNFSVTKSYITCSSTIN 377
Query: 387 LRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
+ +++F + + ED ++ ++++ + E +K
Sbjct: 378 FQALKNFCTILAAKEDGLYHRKSQSLDKFREGLK 411
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
N +K+ + K +YY K NA T E K+V Y +GL WV YY G W
Sbjct: 415 NITYEKIPIHTKTGKIQYYASKLNANT----ESDIKNVCYEYIKGLYWVYSYYILGSTGW 470
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W+YPYH+AP A DL + I G P +P QLL V P S +P+ + + D
Sbjct: 471 DWYYPYHFAPLAVDLSKISISEIRINPGLPLRPLEQLLAVLPPMSKGMVPKVLQPIFND- 529
Query: 653 NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMA 712
D YP D + DM K Y WQ + LPF+D +L E ++L E+ RN
Sbjct: 530 ---YKDCYPEDVKTDMFDKVYLWQEVVLLPFVDFRSILSENASRFNSLGYEDLSRNLRSL 586
Query: 713 DMLFVL 718
D+LF +
Sbjct: 587 DLLFTV 592
>gi|281206450|gb|EFA80636.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 538
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 164/252 (65%), Gaps = 33/252 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP ++ ++ VD++ P EYDNLYLDMNGIIH
Sbjct: 262 MGVPRFFRWVSERYPQIIQNL--------------VDSTAP-----EYDNLYLDMNGIIH 302
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C E + TF +E+ + + +YID+LF ++RP+KLLYMAIDGVAPR+K+NQQR RR
Sbjct: 303 AC-SQEISNSLLTFSEEELIRKVCNYIDKLFHIIRPKKLLYMAIDGVAPRSKLNQQRQRR 361
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F S E++ +Q+ EG+++P +F ITPGTEFM+ LS LQ++I
Sbjct: 362 FL-------SVFLEDKAKQKMISEGKEIP----EVIFSRTAITPGTEFMSNLSDCLQFFI 410
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++N D W ++++I S PGEGEHKI+ Y+R + P +DPN HCLYGLDADLI+
Sbjct: 411 KKKINEDMSWREVEIIFSGPENPGEGEHKIIDYIRKNKASPDWDPNQSHCLYGLDADLIL 470
Query: 239 LALATHEVHFSI 250
LAL THE HF++
Sbjct: 471 LALVTHEPHFNL 482
>gi|70926599|ref|XP_735814.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509808|emb|CAH84865.1| hypothetical protein PC301271.00.0 [Plasmodium chabaudi chabaudi]
Length = 260
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 136/185 (73%), Gaps = 2/185 (1%)
Query: 78 FQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQ 137
F +F YI+RLF ++ P+KLLYMAIDGVAP+AKMNQQRSRRF++ + LR
Sbjct: 1 FLNIFLYIERLFDIIEPQKLLYMAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRN 60
Query: 138 EFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSD 197
+F E R +P + + +DSN+ITPGT+FM LSIAL+Y+I ++ ND W+KI VI SD
Sbjct: 61 KFLSENRNVPDEYNH--WDSNIITPGTQFMHELSIALKYFIEHKITNDEKWKKIVVIFSD 118
Query: 198 ANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFT 257
ANV GEGEHKI ++++ QR GYDPNTRH ++G+DADLIML+LA+HE +F ILRE++
Sbjct: 119 ANVCGEGEHKIYNFIKSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINL 178
Query: 258 PGQQD 262
++D
Sbjct: 179 DQKED 183
>gi|302828800|ref|XP_002945967.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
gi|300268782|gb|EFJ52962.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
Length = 229
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/272 (43%), Positives = 151/272 (55%), Gaps = 62/272 (22%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P FYRWL+E+YPL+ K+ + P E DNLYLDMNGIIH
Sbjct: 1 MGIPKFYRWLSERYPLL-------------NQKLTLTEGPP-----EIDNLYLDMNGIIH 42
Query: 61 PCFHPEDRPAPTTFDE-VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H + +E + +FDY+++L +VRP+KLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 43 NCTHANRKDVGNVTEEDMMLKVFDYLEKLIQIVRPQKLLFMAIDGVAPRAKMNQQRSRRF 102
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+++ ERL+ FMA L L+++I
Sbjct: 103 KSAM---------ERLK-----------------------------FMARLGKHLRFFIR 124
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
++ DP W+K V+ S VPGEGEHKIM Y+R + P Y PN RHC+YGLDADLIML
Sbjct: 125 RKMAEDPLWQKPTVVFSGHEVPGEGEHKIMEYIRWDKRQPTYAPNQRHCMYGLDADLIML 184
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPG 271
+L +HE HF +LREVV G GQP
Sbjct: 185 SLVSHEPHFCLLREVVSYTGSNR-----GQPA 211
>gi|402588112|gb|EJW82046.1| hypothetical protein WUBG_07043 [Wuchereria bancrofti]
Length = 442
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 145/236 (61%), Gaps = 11/236 (4%)
Query: 530 NSDNPEE--DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE 587
NS + +E D+V+L E GWK+RYY+ KF + R+ V L Y EGLCWV+HYYY+
Sbjct: 8 NSSSEDEAFDEVRLWEDGWKDRYYKSKFQVDGKDI--VFRRKVALAYVEGLCWVLHYYYQ 65
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNISFE-LGHPFKPFNQLLGVFPSASSHALPEHYR 646
G SW W+YP+HYAPFASD + QF F PFKP QL+GVFP+AS LPE ++
Sbjct: 66 GCASWDWYYPFHYAPFASDFDAVSQFKPDFSAYTEPFKPLQQLMGVFPAASRMHLPEAWQ 125
Query: 647 KLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEAR 706
+LM P SPI DFYP +F +D+NGK+ +WQG+A LPF+DE RLL+ +K +E L E
Sbjct: 126 ELMISPVSPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKE 185
Query: 707 RNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYIS 762
RNS D LFV SHP Y E + K+ ++ ++ L+ GM G +
Sbjct: 186 RNSRGPDRLFVGPSHPF----YNFAEALYESGRKDSTDLA--IDTSLTFGMAGTVG 235
>gi|303390661|ref|XP_003073561.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
gi|303302708|gb|ADM12201.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
Length = 656
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 217/454 (47%), Gaps = 77/454 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RWL + V ++E+ V D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHREAVHSIMEKPSV---------------------DCLYLDFNAIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P ++++ + D+ID + + RPRKLLY+AIDGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLGSEEEIERDLYKTVGDFIDYILLRTRPRKLLYIAIDGVAPRAKLSHQRARRYK 99
Query: 121 A---------------SKDAADSAAE--EERLRQEFE--------------REGRKLPPK 149
+ + A S +E EE EF E L
Sbjct: 100 SALGKKEGKAPVSTGKTDPTASSISEKTEEATDVEFTGESSLYDKFIAEDLSESSSLAMD 159
Query: 150 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
+++ FD N ITPGT FM L L YI +L+ DP +++I S VPGEGE KIM
Sbjct: 160 VEAEKFDLNCITPGTPFMERLHNVLISYIQYKLSKDPEVSHLRIIYSSYLVPGEGEQKIM 219
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK---CFL 266
S++R Q +P N H +Y D DLI L L+ ++ I+R+ F+P + K C
Sbjct: 220 SFIRNQ--IPA-AKNDVHMIYSPDGDLIFLGLSLYKSRVLIMRD-YFSPSKARKKKICTK 275
Query: 267 CGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE 326
CG+ GH C G FD + +++I LR L EFR +
Sbjct: 276 CGRTGHSNDEC--------GVFDNYH---------FVYVNIAELRSRLIREFR-KHTTQR 317
Query: 327 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS 386
+ E ++ D+IF+CF +GNDF+P +P L+IR +I+ L + K F Y+T + +
Sbjct: 318 FNEERLLSDWIFLCFLLGNDFVPSIPCLDIRFHSIDTLTEIMMKNFSETKSYITCNTSIN 377
Query: 387 LRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
+ + +F + ED ++ ++++ R E +K
Sbjct: 378 YQVLRNFYTILARKEDGLYHRKSQSLDRLREELK 411
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
+K+ + K +YY K NAKT + K++ Y + L WV YY G W W+Y
Sbjct: 419 EKIPIHTKTGKIQYYTSKLNAKT----DSDIKNICYEYIKALYWVYSYYILGYTGWDWYY 474
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
P+H+AP A+DL L I G P +P QLL V P S +P + + +
Sbjct: 475 PHHFAPLAADLSKLSISEIRINSGLPLRPLEQLLVVLPPMSKGMVPRELQPIFNN----Y 530
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
D+YP D E DM K Y WQ + LPF+D +L E ++L E+ RN D+ F
Sbjct: 531 KDYYPEDVETDMFDKVYLWQEVVLLPFMDFRSILSENASRFNSLGYEDLSRNLRSLDLFF 590
Query: 717 VL 718
+
Sbjct: 591 TV 592
>gi|323455278|gb|EGB11147.1| hypothetical protein AURANDRAFT_22633 [Aureococcus anophagefferens]
Length = 356
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 205/389 (52%), Gaps = 62/389 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWLA +YP + A ++ E NLY+D NG++H
Sbjct: 1 MGVPAFFRWLAARYPPLEARWVQVE------------------------NLYVDCNGVVH 36
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC HPE A P T +E+ + Y+DRL RP KL+Y+A+DGVAPRAKMNQQR+RR
Sbjct: 37 PCCHPEGPGAVQPATEEEMLDNVGAYLDRLVAAARPTKLVYLALDGVAPRAKMNQQRTRR 96
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
F ++++A ++AA L R G + K+ +D N ITPGTEFMA L+ + +
Sbjct: 97 FCSAREADEAAAATREL---LARRGHRPAAKAR---WDHNAITPGTEFMAKLAAFCRRWA 150
Query: 179 HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
+ P ++ VI+SDA PGEGEHKIM ++R + P RH + G DADL+
Sbjct: 151 ESLVARCP---QLSVIVSDAATPGEGEHKIMDWIRRSQADPDRR-GERHAVCGQDADLMF 206
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+LA H +LRE V T + G + + P
Sbjct: 207 LSLALHAPRVYVLRERVETRRK-------------------PRGGGKGGPPPEPRKAFGP 247
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNP-----PFEIDLECIVDDFIFMCFFVGNDFLPHMPT 353
+ Q+L LR L + + PF D E +DDF+ +CFFVGNDFLP +P+
Sbjct: 248 PR-LQYLSCQRLRRCLIGDASLNAAADGALPFPRDDERFLDDFVLLCFFVGNDFLPQLPS 306
Query: 354 LEIREGAINLLMAVYKKEF-RALGGYLTD 381
L I +G ++LL+ +Y++ R LGGYLTD
Sbjct: 307 LSIPDGGLDLLLLLYRRALPRHLGGYLTD 335
>gi|449330168|gb|AGE96430.1| ribonucleic trafficking protein 1 [Encephalitozoon cuniculi]
Length = 655
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 216/454 (47%), Gaps = 77/454 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RWL + + ++E+ V D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHKETIHSIMEKPSV---------------------DALYLDFNAIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P ++++ + D+ID + + RPRKLLY+A+DGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLGSEEEIERDLYKTVGDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRYK 99
Query: 121 ASKDAADSAA-----------------EEERLRQEFE--------------REGRKLPPK 149
++ + +A ++E +EF E L
Sbjct: 100 SALGKKEGSAVIAAAKTDPTMSSPSEKKDEIPNEEFTGESSLYDKFIAEDPSESSSLAID 159
Query: 150 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
+++ FD N ITPGT FM L L YI +L++DP +++I S VPGEGE KIM
Sbjct: 160 VETEKFDLNCITPGTPFMERLHKVLISYIQCKLSSDPEVSNLRIIYSSYLVPGEGEQKIM 219
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK---CFL 266
S++R Q ++ N H +Y D DLI L L+ I+R+ F+P ++ + C
Sbjct: 220 SFIRSQGSIAR---NDVHMIYSPDGDLIFLGLSLQRNRVLIMRD-YFSPSKERRKRTCTK 275
Query: 267 CGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE 326
CG+ GH C V + +++I LR L EFR +
Sbjct: 276 CGRTGHSDEECG-----------------VFTNYHFVYVNISELRTRLIREFR-RHTAQR 317
Query: 327 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS 386
E I+DD+IF+CF +GNDF+P +P L+IR +I + + K F + Y+T +
Sbjct: 318 FSEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSYITCNKMIN 377
Query: 387 LRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
+ + +F + S ED ++ ++++ + E +K
Sbjct: 378 YQALRNFYAILASKEDALYHRKSQSLDKFREGLK 411
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
+K+ + K +YY K NA T E K++ Y +GL WV YY G W W+Y
Sbjct: 419 EKIPIHTKTGKVQYYTSKLNATT----ESDIKNICYEYVKGLYWVYSYYVLGWTGWDWYY 474
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYH+AP A+DL L +I GHP +P QLL V P S +PE + + D
Sbjct: 475 PYHFAPLAADLSKLSINDIQISPGHPLRPLEQLLVVLPPMSRGMVPEGLQPIFDD----Y 530
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
D+YP D + DM K Y WQ I LPF+D +L E +TL E+ RN D+LF
Sbjct: 531 KDYYPEDVKTDMFDKVYLWQEIVLLPFMDFRPILSENAVKFNTLGYEDLSRNLRSLDLLF 590
Query: 717 V 717
Sbjct: 591 T 591
>gi|85014269|ref|XP_955630.1| 5-3 exoribonuclease [Encephalitozoon cuniculi GB-M1]
gi|19171324|emb|CAD27049.1| RIBONUCLEIC TRAFFICKING PROTEIN 1 (5'3'exoribonuclease)
[Encephalitozoon cuniculi GB-M1]
Length = 655
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 216/454 (47%), Gaps = 77/454 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RWL + + ++E+ V D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHKETIHSIMEKPSV---------------------DALYLDFNAIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P ++++ + D+ID + + RPRKLLY+A+DGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLGSEEEIERDLYKTVGDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRYK 99
Query: 121 ASKDAADSAA-----------------EEERLRQEFE--------------REGRKLPPK 149
++ + +A ++E +EF E L
Sbjct: 100 SALGKKEGSAVIAAAKADPTMSSPSEKKDEIPNEEFTGESSLYDKFIAEDPSESSSLAID 159
Query: 150 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
+++ FD N ITPGT FM L L YI +L++DP +++I S VPGEGE KIM
Sbjct: 160 VETEKFDLNCITPGTPFMERLHKVLISYIQCKLSSDPEVSNLRIIYSSYLVPGEGEQKIM 219
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK---CFL 266
S++R Q ++ N H +Y D DLI L L+ I+R+ F+P ++ + C
Sbjct: 220 SFIRSQGSIAR---NDVHMIYSPDGDLIFLGLSLQRNRVLIMRD-YFSPSKERRKRTCTK 275
Query: 267 CGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE 326
CG+ GH C V + +++I LR L EFR +
Sbjct: 276 CGRTGHSDEECG-----------------VFTNYHFVYVNISELRTRLIREFR-RHTAQR 317
Query: 327 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPS 386
E I+DD+IF+CF +GNDF+P +P L+IR +I + + K F + Y+T +
Sbjct: 318 FSEERILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSYITCNKMIN 377
Query: 387 LRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIK 420
+ + +F + S ED ++ ++++ + E +K
Sbjct: 378 YQALRNFYAILASKEDGLYHRKSQSLDKFREGLK 411
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
+K+ + K +YY K NA T E K++ Y +GL WV YY G W W+Y
Sbjct: 419 EKIPIHTKTGKVQYYTSKLNATT----ESDIKNICYEYVKGLYWVYSYYVLGWTGWDWYY 474
Query: 597 PYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
PYH+AP A+DL L +I GHP +P QLL V P S +PE + + D
Sbjct: 475 PYHFAPLAADLSKLSINDIQISPGHPLRPLEQLLVVLPPMSRGMVPEGLQPIFDD----Y 530
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
D+YP D + DM K Y WQ I LPF+D +L E +TL E+ RN D+LF
Sbjct: 531 KDYYPEDVKTDMFDKVYLWQEIVLLPFMDFRPILSENAVKFNTLGYEDLSRNLRSLDLLF 590
Query: 717 V 717
Sbjct: 591 T 591
>gi|440299483|gb|ELP92037.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 661
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 209/421 (49%), Gaps = 61/421 (14%)
Query: 1 MGVPAFYRW---LAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNG 57
MGVP+F+ W + + Y + I+E+ D + N G ++D ++D NG
Sbjct: 1 MGVPSFFAWVCSMCKDYTKYLPKNIQED-----------DLREQNHCGRDFDTFFIDFNG 49
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
I+H C HP AP + E+F +F +D VRPRKL+Y+A+DGV P AK+ QQR R
Sbjct: 50 IVHNCSHPAHDVAPVSEAELFDRIFAQLDHYINYVRPRKLVYIAVDGVCPFAKIVQQRKR 109
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R+ +++ + ++ FDSN ITPGT FM LS+AL Y
Sbjct: 110 RYISARGNSGTS-------------------------FDSNCITPGTPFMERLSVALHAY 144
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
+ R++ + W + VILS+ NVPGEGEHKI ++R + + N +HC+YG+DADLI
Sbjct: 145 VTNRMDTNLYWSSLSVILSNPNVPGEGEHKIFDFLRKESKNTDF-ANLKHCVYGMDADLI 203
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML LA++ I+RE + C +C HL ++ G V +
Sbjct: 204 MLTLASNLPFVYIIREEMEFTKPNIICDVC----HLNHRT-----------NQHGKPVNL 248
Query: 298 PKKPYQFLHIWTLREYLDY-EFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI 356
L W + E E ++ +I +++DF+ + F VGNDFLP +P+L++
Sbjct: 249 ILCDPNVLSTWLITECAKTCEMKME----DISRVELINDFVLITFLVGNDFLPKIPSLKV 304
Query: 357 REGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+ G + +++ Y F+ G LT+G +L ++ + + E + + R ++
Sbjct: 305 QSGGMEIILKYYWPLFKE-GKRLTNGININLHLLKEMFAKITTEESELLKMVVRTTKKSQ 363
Query: 417 E 417
E
Sbjct: 364 E 364
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 109/221 (49%), Gaps = 8/221 (3%)
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFY 596
D + + G+ RYY+ F E K +V Y EGL WV YY GV SW+WFY
Sbjct: 378 DTIMIHTQGYHTRYYDTHFGKAN--NTENFYKQIVGEYIEGLFWVFQYYTVGVPSWRWFY 435
Query: 597 PYHYAPFASDLK---DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
P HYAPFA D+ DL+Q + FE P P QL+ V P S + +P L+
Sbjct: 436 PEHYAPFAEDIYKYIDLNQEGL-FEPDEPILPMEQLISVLPPQSFNNIPSTLASLVVSKQ 494
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
SPI +++ T F D+NG+ ++G+ +L FID +++ + V + L E RRNS +
Sbjct: 495 SPILNYFNTTFRTDINGEAKLFKGVPQLDFIDLSKIEELVAERMAELKGREMRRNSRYGE 554
Query: 714 MLFVLLSHPLSASI--YTLDEHCKQLKIKERVEVKERLNPE 752
L + + I LD K + ++V K NPE
Sbjct: 555 NLLYFTTEGEYSEIMPLFLDIQVKNFETIQKVNEKIESNPE 595
>gi|68068571|ref|XP_676196.1| exoribonuclease [Plasmodium berghei strain ANKA]
gi|56495779|emb|CAH94068.1| exoribonuclease, putative [Plasmodium berghei]
Length = 1136
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 188/363 (51%), Gaps = 46/363 (12%)
Query: 138 EFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSD 197
+F E R +P D +DSN+ITPGT+FM LS+AL+Y+I ++ ND W+KI VI SD
Sbjct: 1 KFLSENRNVP--DDYHHWDSNIITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSD 58
Query: 198 ANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVV-F 256
ANV GEGEHKI ++++ QR GYDPNTRH ++G+DADLIML+LA+HE +F ILRE++
Sbjct: 59 ANVCGEGEHKIYNFIKSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINL 118
Query: 257 TPGQQDK-------------------C--FLCGQPGHLAANCEGKAKRK-AGEFDEKGDE 294
P +++K C FL K K+K +++++
Sbjct: 119 DPKEENKPQVKDNYVGVFKGKGDLQYCTKFLRNNNSTTIDGNSNKGKKKYCNKYNDRNYA 178
Query: 295 VVVPKKP----------YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 344
+ Q L + LREYL +F + +LE +DDFIF+CF G
Sbjct: 179 NINISSTCSINYENWNELQILDLTILREYLYKDFFF---DAKYNLERCIDDFIFICFLCG 235
Query: 345 NDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRI 404
NDFLPH+P++ I G+I+ L+ +Y+K F LG YL + + + +I + E
Sbjct: 236 NDFLPHLPSISIASGSIDQLLLLYQKVFPVLGDYLINEGSMNFQSFIKYISFIAEVERET 295
Query: 405 FQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLV--PVSRFHGSRLASGPSPSPYQ 462
F + + KREK + ++ P Q D P+S+ R + SP
Sbjct: 296 FVSQYDFKK------KREKRELQKDAFKRPKCQDDGKKNDPMSQARNDRTSQHEQISPKN 349
Query: 463 QSE 465
++
Sbjct: 350 NTD 352
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 153/255 (60%), Gaps = 11/255 (4%)
Query: 494 AAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLG---EPG-WKER 549
AI E E S E + EF LKE ++ ++ +NP+ED V+LG +P + R
Sbjct: 499 GAIFEEE-SPEMKKLNDITEFNLLLKEAVKKANEC---ENPKED-VELGADDDPNDLRAR 553
Query: 550 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD 609
YY+ KF+ + +E ++VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL
Sbjct: 554 YYKSKFHLDENDNVDEFVQEVVYKYIEGLAWVLCYYFQECPMWHWYYPYYYAPLSSDLL- 612
Query: 610 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
+ NISFE P PF QLL V PS SSH LP+ YR+LM SPI DFYP F+ + N
Sbjct: 613 IKDINISFEKDEPLLPFEQLLCVLPSNSSHCLPKMYRELMLKSESPIIDFYPKTFKEEEN 672
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT 729
GK++ +Q I LPF+++ R++ + ++ TLT+EE +RN + +++ +H LS I T
Sbjct: 673 GKKFKYQWIVLLPFVEKERIIRFARNLDDTLTDEEKKRNRRGLNKIYMSSTHTLSKKITT 732
Query: 730 -LDEHCKQLKIKERV 743
+ + K++K KE+
Sbjct: 733 SMRTYIKEIKDKEKT 747
>gi|195338779|ref|XP_002036001.1| GM16250 [Drosophila sechellia]
gi|194129881|gb|EDW51924.1| GM16250 [Drosophila sechellia]
Length = 431
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 146/250 (58%), Gaps = 14/250 (5%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V+L E G+K+RYYE KF+ + + R V L+Y GLCWV+ YYY+G SW W++PY
Sbjct: 16 VRLWEDGFKDRYYESKFDVAPGNQ--QFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 73
Query: 599 HYAPFASDLKDLDQFNISFELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
HYAPFASD ++ + FE G PF P QL+GVFP+ASS +PE + KLM+DP SPI
Sbjct: 74 HYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPII 133
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
DFYP DF++D+NGK+++WQG+A LPF+DE RL + LT EE +RN + L++
Sbjct: 134 DFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYI 193
Query: 718 LLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPH-PPVFRSP 776
P H K++K + + DGM G + + + +SP
Sbjct: 194 SNQSP----------HYKKVKKVSEKDDESVCKAISFDGMRGTLGSTELNTAISGILKSP 243
Query: 777 VASMEDIMGN 786
++ + DI N
Sbjct: 244 ISGLSDINDN 253
>gi|308503096|ref|XP_003113732.1| CRE-XRN-2 protein [Caenorhabditis remanei]
gi|308263691|gb|EFP07644.1| CRE-XRN-2 protein [Caenorhabditis remanei]
Length = 988
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 152/248 (61%), Gaps = 12/248 (4%)
Query: 532 DNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCS 591
D +D ++L E GWK+RYY KF+ + + + R V Y EGLCWV+ YYY+G S
Sbjct: 528 DEEPKDDIRLFESGWKDRYYRAKFDVGS--DDVDFRHRVAWAYVEGLCWVLRYYYQGCSS 585
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISF-ELGHPFKPFNQLLGVFPSASSHALPEHYRKLMT 650
W W++PYHYAPFASD + + +F F + PF P QL+ VFP+AS LP ++KLM
Sbjct: 586 WDWYFPYHYAPFASDFETVGEFKPDFTKPTKPFNPLEQLMSVFPAASKQHLPVEWQKLMI 645
Query: 651 DPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
+ +SPI D YP DF +D+NGK+Y+WQG+A LPF+DE RLL +K + TLT+EE +RN+
Sbjct: 646 EDDSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLATLKSVYPTLTDEEKQRNTR 705
Query: 711 MADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP 770
+ +F+ +H + + + K + V+ L+P L +G++G I+ + P
Sbjct: 706 GPNRIFIGRNH----KSFAFFQQVAESKSTDMVD----LDPSLLNGVSGKIASDSTATAP 757
Query: 771 PV-FRSPV 777
+ F SPV
Sbjct: 758 GLPFVSPV 765
>gi|290992973|ref|XP_002679108.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
gi|284092723|gb|EFC46364.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
Length = 968
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 216/457 (47%), Gaps = 69/457 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNG-LEYDNLYLDMNGII 59
MGVP + +L + P ++ ++I P ++ + N + D+LYLDMNGII
Sbjct: 1 MGVPFLFSFLLSECPEMIKEII------------PSSSASSSSNTTMTIDHLYLDMNGII 48
Query: 60 HP-------------------------CFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRP 94
H + E+ P T ++ + Y++ + RP
Sbjct: 49 HTFKDTNLQTKLLERLVSSSSSSSSSSSSNNEEVEIPMTMEKFIFSILLYLEEVIYRFRP 108
Query: 95 RKLLYMAIDGVAPRAKMNQQRSRRF-----------RASKDAADSAAEEERLRQEFEREG 143
K L A+DG AP AK+NQQR RR+ R E+ E
Sbjct: 109 SKTLMFALDGSAPCAKINQQRERRWVSFNNHSGLPKRHHHHHQHGNHHGEQHDLHHGEEN 168
Query: 144 RKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIK-VILSDANVPG 202
RK K D +FDS IT GT FM LS LQ++I +L +DP W I+ +I SD++V G
Sbjct: 169 RK--KKEDESLFDSISITSGTSFMKELSEHLQFFIKRKLQDDPNWRNIENIIFSDSSVFG 226
Query: 203 EGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQD 262
EGEHKIMS++R + +P + + +YG+D+DLI+L+L THE +LR+ + P D
Sbjct: 227 EGEHKIMSHIRKVQQIPN-RKSEKFMIYGMDSDLILLSLVTHEEDIYVLRD--WMPSVSD 283
Query: 263 KCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP- 321
+ N + K+ + D+ + + + I +R+ ++ R
Sbjct: 284 SFNQVYSRWKVRRNFKKKSNSSSRTVDKDRFD-----HKFHLVEISLVRKLIEKYMRQDL 338
Query: 322 NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEI--REGAINLLMAVYKKEFRAL--GG 377
N E DL ++DDFI M F GNDF+ +PTL+I E A+ L VY+ F + G
Sbjct: 339 NSSIEFDLNRVIDDFILMLFVCGNDFISSLPTLDIGKDENALGYLFKVYRTLFSTVFKGC 398
Query: 378 YLTDGSKPS----LRRVEHFIQAVGSYEDRIFQKRAR 410
Y+T+ S PS L R+E F+Q +G E R+ R +
Sbjct: 399 YITNSSNPSELINLERLETFMQVIGRLEVRVLTNRLK 435
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 546 WKERYYEEKFNAK--------TPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYP 597
WK YY K N P+ RE +V Y + + W +YYY GV SW++ Y
Sbjct: 720 WKVNYYSRKLNITYDSSSKGGGPQVRE-----LVKEYLKAMYWTFYYYYFGVPSWEYSYN 774
Query: 598 YHYAPFASDLKDLDQF--NISFELGHPFKPFNQLLGVFP 634
+HYAP ASD +L + I+F G P P LL V P
Sbjct: 775 FHYAPAASDFVNLKELFTEITFHKGLPLNPIESLLAVIP 813
>gi|145515211|ref|XP_001443505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410894|emb|CAK76108.1| unnamed protein product [Paramecium tetraurelia]
Length = 1303
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 219/437 (50%), Gaps = 78/437 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FY WL ++PL + + + V D YLDMN II+
Sbjct: 1 MGVPNFYSWLMRRFPLCLYEHTRAQRV---------------------DYFYLDMNQIIY 39
Query: 61 PCFHP-----EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
C +D+ FD+++ + +Y+D + +V P++LL++A DGVAPRAKMNQQR
Sbjct: 40 KCATDPTVLFKDQLRERDFDDIWVSILNYLDMIINLVNPQQLLFLAFDGVAPRAKMNQQR 99
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
RRF++ K +A +++ F++ ++ + +N +PGTEFM L+ ++
Sbjct: 100 QRRFQSQKRYKYLSAHLQQIGL-FQK----------NETYKNNQFSPGTEFMTQLNQQIK 148
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
+YI + + DP ++ +K+I S +VPGEGEHK++S++ RNL DPN+ H +YG DAD
Sbjct: 149 FYIERKYSEDPKFKNLKIIFSGCDVPGEGEHKLLSFI---RNLQC-DPNSVHMIYGADAD 204
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML L T + I+RE D F Q AAN
Sbjct: 205 LIMLGLLTQLKNVLIIRE--------DLKF--KQTASAAAN------------------R 236
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDFLPHMPT 353
VV + ++I +REYLD EF + ++ D+ I+DDFI +CFFVGNDFLP +
Sbjct: 237 VVKIPEFLVINISIVREYLDLEFAVLKDKMKVPYDINRIIDDFILLCFFVGNDFLPRIFC 296
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR--- 410
+IR G I L+ ++K YL + + + + + +E R +
Sbjct: 297 FDIRIGTIEPLVDLFKNHLTNANDYLVHRGDINYKELISLLDLLQGFEKLCINDRQQEML 356
Query: 411 --LHQRHAER--IKREK 423
L+ +H R I +EK
Sbjct: 357 NYLNTKHQNRQVIAKEK 373
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 15/151 (9%)
Query: 550 YYEEKFNAKTPEERE-ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL- 607
YY+ K +E + + D+ + Y EG+ +V+ YY++GV SW+W+Y Y+YAP DL
Sbjct: 395 YYKAKCQITKDDELDLDKLGDMCVNYMEGIYFVLQYYFKGVPSWEWYYKYYYAPLCGDLV 454
Query: 608 -------KDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI-- 656
K L I G P+ PF QLL + ++ LPE Y +L+TD + I
Sbjct: 455 GVVSNMVKQLQDKEEPILLTKGEPYPPFKQLLSILTPENAQLLPEPYGRLLTDKENSILR 514
Query: 657 --SDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
D+YP +FE D G Y Q I K+PF+D
Sbjct: 515 TPIDYYPENFETDSYGTMYEHQHITKIPFLD 545
>gi|407040062|gb|EKE39962.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 666
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 205/414 (49%), Gaps = 58/414 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ + W+ + P ++ P I G + + N G EYDNLY+D NGIIH
Sbjct: 1 MGVPSLFAWVRQICP----GYVKRLPQKIQGE----EKREKNETGEEYDNLYIDFNGIIH 52
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H E + +E+ + +F +DR VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 53 QCSHSEKEEEAASEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYC 112
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ + FDSN ITPGT+FM + IAL YI
Sbjct: 113 SILNNTGG--------------------------FDSNCITPGTKFMEKIGIALHGYIVN 146
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R++ND W +KVILSD+ V GEGEHKI ++R + RHC+YG+D DLI+L
Sbjct: 147 RMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIEKNKKFKEERHCIYGMDGDLIILT 206
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L + + +ILRE + +KC +CG+ K K K D + ++
Sbjct: 207 LGINITNMTILREEQEIIKKNNKCDICGK----------KHKTK----DHGKETKLIMCY 252
Query: 301 PYQFLHIWTLRE--------YLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
P + L W + E + +I E I+ DFI + F VGNDFLP +P
Sbjct: 253 PNE-LRKWLINEAKKNLIETKKEEGEEYKEEDIQIIEEEIIKDFILISFLVGNDFLPRIP 311
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
+++I+ G + +L+ Y K + G L+ G++ +++ + + +G E I +
Sbjct: 312 SIKIQTGGMEMLLKNYWKLY-VKGKRLSKGTEINIKNFKELFKMIGEEESNILK 364
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 126/257 (49%), Gaps = 14/257 (5%)
Query: 482 KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED---K 538
K RLS G I I + F+ +E K ++ +DK N D +
Sbjct: 333 KGKRLSKGTEIN--IKNFKELFKMIGEEESNILKGIIQNTKKDKEVKEYDQNIYFDSSKE 390
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KL + G+ +RYY+ FN E +++V Y EG+ WV +YY + SW+W+Y +
Sbjct: 391 IKLNQEGYHDRYYQIHFNTTNIE----FIQNIVHHYFEGISWVFNYYLNTLPSWRWYYKF 446
Query: 599 HYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
HYAPFA D N ISF P P QLL V P S LP + P SPI
Sbjct: 447 HYAPFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPHSFINLPSKLAHFVLSPTSPI 506
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM-ADML 715
++ T F++D+NG+ ++G+ LP ID L V +EH+L + +RN ++ ++L
Sbjct: 507 LHYFNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLPPSDLKRNLLLPFNIL 566
Query: 716 FVL--LSHPLSASIYTL 730
+V S PL + I +L
Sbjct: 567 YVTKNSSLPLFSKIQSL 583
>gi|156098318|ref|XP_001615191.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804065|gb|EDL45464.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 587
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 206/458 (44%), Gaps = 97/458 (21%)
Query: 7 YRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPE 66
Y+WL YP V EE + +G K + D Y+DMNG+IH C H
Sbjct: 2 YKWLTSYYPTV-----REELITNEGQK-------------DVDIFYVDMNGVIHHCTHAN 43
Query: 67 DRPAPTTFD-EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDA 125
P + E+ + Y+ LF +V+PRKL+Y+ +DGV+P+AKMNQQR RRF +
Sbjct: 44 KETLPVHDEHELLTNILKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRKRRFLSLFKV 103
Query: 126 ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNND 185
+D++ + + +F+ N IT GT+FM +++AL + +
Sbjct: 104 SDNS--------------------NSAHLFNPNCITTGTDFMYKINLALNKWFQIL--KK 141
Query: 186 PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHE 245
G VI S ++VPGEGEHKI+ ++R G N HC+YGLDADLIML+L TH
Sbjct: 142 KGIFPFDVIFSGSDVPGEGEHKILKFIREHCKRDGAFRNYSHCIYGLDADLIMLSLVTHL 201
Query: 246 VHFSILREVVFTPGQQDKCFL---------CGQPGHLAANCEGKAKR----KAGEFDE-- 290
ILR+ L GQPG A N + G +E
Sbjct: 202 NSIFILRDKYKMANDSHAALLENLEKAQRGVGQPGGDAENTNHGGNEENPIQGGNAEEPI 261
Query: 291 ---KGDEVVVPKK------PYQFLHIWTLREYLD------YEFRI--------------- 320
++ + P P+ +H +T Y + Y+F I
Sbjct: 262 QSDTAEDTIQPHTAEDAAPPFCRVHRYTQDHYANCEPLNSYDFEILDVYKLRNSIRTQIA 321
Query: 321 ---------PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKE 371
N F I +VDD +F+ F VGNDFLPH+P ++I EG++N ++ Y
Sbjct: 322 TYINKLKKEKNVVFNISR--VVDDIVFLSFLVGNDFLPHIPNVDINEGSMNEILNAYIFY 379
Query: 372 FRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
G Y+T K ++R++ ++ + + E F KR
Sbjct: 380 IYKYGNYITLKDKVHIQRLKIILKILSAQEFSYFLKRG 417
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 543 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
E +K YY +KF + P++ + +V +Y EGL W +HYY+ G SW W YPYHYAP
Sbjct: 428 ERTYKGYYYLQKFGVEDPQQIQL----IVNKYIEGLFWNLHYYHFGCASWCWEYPYHYAP 483
Query: 603 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
SDL ++ + FE G P+ + L+ V P ++ LPE Y+ + ++ + F+P
Sbjct: 484 LCSDLLSFEKSDFFFEKGKPYSAYTHLISVLPQKDNNLLPEAYKNIYSE--DEVKSFFPE 541
Query: 663 DFEVDMNGKRYSWQGIAKLPFID 685
+ +D NGK+ +W+ I LPFI+
Sbjct: 542 NVRIDPNGKKETWEYIVHLPFIN 564
>gi|300706190|ref|XP_002995390.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
gi|239604457|gb|EEQ81719.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
Length = 616
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 220/438 (50%), Gaps = 73/438 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP + WL +K+P D I ++P P + D LY+D N IIH
Sbjct: 1 MGVPILFSWLNKKFP----DCITQKP----------------PE--QVDILYIDYNAIIH 38
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMV-------RPRKLLYMAIDGVAPRAKMNQ 113
C++P + D++++ D IDRL MV +PRK+LY+A+DGVAP AK+
Sbjct: 39 NCYNPN----LGSLDKIYE---DMIDRLTKMVDNIVEKAKPRKILYIAVDGVAPAAKLAH 91
Query: 114 QRSRRFRASKDAA------DSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFM 167
QR RR++A+ + A D ++ E QE + PP ++ +FDSN ITPGTE M
Sbjct: 92 QRGRRYKAASEKAGPNGYIDFSSNVEITTQEGALTSK--PPTAN--IFDSNSITPGTELM 147
Query: 168 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 227
L + + LN +P ++ +K++ S VPGEGE KIM+++R + +L +P H
Sbjct: 148 KFLHKNIIDMLIYNLNTNPNYKDLKILYSSYLVPGEGEQKIMAFLR-KYHLS--NPKDTH 204
Query: 228 CLYGLDADLIMLALATHEVHFSILREVVF-TPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
+Y D D+I L ++ ++V+ I+RE F + +++ C +C + GH + C
Sbjct: 205 VMYSPDGDIIFLGVSLYDVNLYIMREDTFNSKNKKEICRMCSRMGHFSEQCNRPDLLIYS 264
Query: 287 EFDEKGDEVVVPKKPYQFLHIWTLR-EYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGN 345
D VPK L I+ ++ EY++ + ++ D++ +CF +GN
Sbjct: 265 YID-------VPKFRASLLKIFNIKIEYVE--------------KRMLTDWVLVCFLLGN 303
Query: 346 DFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKP-SLRRVEHFIQAVGSYEDRI 404
DFLP +P ++I+ G+I L + F Y+T K + + +E F + + E+
Sbjct: 304 DFLPGIPCVDIKIGSIENLTSTLCDNFTNCKDYITTEDKNINFKILECFFVLLSTRENDW 363
Query: 405 FQKRARLHQRHAERIKRE 422
+ + ++ R I+ E
Sbjct: 364 YNNKTKMLNRSCNFIREE 381
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 523 RDKSDAFN-SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWV 581
+K+ N S N ++++L P +++YY KF A E ++ Y G+ W
Sbjct: 365 NNKTKMLNRSCNFIREEIQLNTPQGRQKYYNSKFGAHC----EADFNNISQEYITGILWT 420
Query: 582 MHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHAL 641
+YY G SW W YPYH+APF DL ++ + + + G PF QL+ V P S + +
Sbjct: 421 FNYYIGGKTSWDWVYPYHFAPFVRDLVNVVRAHYDLKKGCVLTPFEQLMVVIPPQSKNLV 480
Query: 642 PEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLT 701
E R + + D YP + DM K W G+ LP + +L+ VK + ++
Sbjct: 481 TEKLRYIFDE----YKDLYPLTIKFDMFDKYLLWTGVVLLPPFNSQVVLNAVKGKINEIS 536
Query: 702 EEEARRNSIMADMLFV 717
E RN+ +++LFV
Sbjct: 537 ASELDRNTEESELLFV 552
>gi|452819063|gb|EME26163.1| 5'-3' exoribonuclease, partial [Galdieria sulphuraria]
Length = 537
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 142/239 (59%), Gaps = 8/239 (3%)
Query: 496 IVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKF 555
+ + E E Q+ KE+F+ +LKE L K + ED V+LGE GWKERYYE+KF
Sbjct: 78 LSQVEYMLELSDQQVKEQFEKELKERLYKKRVV----DSVEDVVRLGEQGWKERYYEKKF 133
Query: 556 N-AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD--LDQ 612
+ + E + R+++ +Y EGL WVM YYY G SW W++PYHYAPFASDL +
Sbjct: 134 HWSPQSETSQRKREELAYKYFEGLLWVMRYYYRGCVSWTWYFPYHYAPFASDLAACPFEA 193
Query: 613 FNISFELGHPFKPFNQLLGVFP-SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
++ +E G PF+P QL+ V P S++ LP+ +LM DP+S + FYP DF +D+ GK
Sbjct: 194 DSVQYERGKPFRPLEQLMAVLPPSSAKEVLPKSLTQLMMDPHSELKPFYPDDFVIDLEGK 253
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
R+ WQG+A LPF+D L + V+ E + T EE RNSI +L S L I L
Sbjct: 254 RFVWQGVALLPFVDAFLLENAVRNAEESFTLEERERNSIGETILATHKSTLLGQFISQL 312
>gi|167377811|ref|XP_001734553.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903890|gb|EDR29281.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 662
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 205/406 (50%), Gaps = 36/406 (8%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ + W+ + P V + P I G D + N G EYDNLY+D NGIIH
Sbjct: 1 MGVPSLFAWVKQICPKYVKRL----PKEIQGK----DKREKNETGEEYDNLYIDFNGIIH 52
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H E + +E+ + +F IDR VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 53 QCSHSEKEEEAKSEEEIMERIFKEIDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYC 112
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ + ++ FDSN ITPGT+FM + IAL YI
Sbjct: 113 SIIN--------------------------NNGGFDSNSITPGTKFMEKIGIALHGYIVN 146
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R++ND W ++VILSD+ V GEGEHKI ++R + RHC+YG+D DLI+L
Sbjct: 147 RMDNDIYWSGLRVILSDSKVAGEGEHKIYEFIRKEIEKNCKFKEERHCIYGMDGDLIILT 206
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L + + +ILRE + KC +CG+ H + + K +E ++ K
Sbjct: 207 LGINITNMTILREEQEIIKKNIKCDICGKK-HKTKDHGKETKLIMCYPNELRKWLINEAK 265
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
+E E++ I E I++DFI + F VGNDFLP +P+++I+
Sbjct: 266 KNLIETKKEEKEKKGEEYKEEEEEINIIEEEIINDFILISFLVGNDFLPRIPSIKIQTRG 325
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
+ +L+ Y K + G L+ G++ +++ + + +G E I +
Sbjct: 326 MEILLKNYWKLY-VKGKRLSKGTEINIKNFKELFKMIGEEESNILK 370
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 14/257 (5%)
Query: 482 KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED---K 538
K RLS G I I + F+ +E K ++ +DK N D +
Sbjct: 339 KGKRLSKGTEIN--IKNFKELFKMIGEEESNILKEIIQNTKKDKEVKVYDQNIYFDSSKE 396
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KL + G+ +RYY+ FN E +++V Y EG+ WV +YY + SW+W+Y +
Sbjct: 397 IKLNQEGYHDRYYQIHFNTTNIE----FIQNIVHHYFEGISWVFNYYLNKLPSWRWYYKF 452
Query: 599 HYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
HYAPFA D N ISF P P QLL V P S + +P + PNSPI
Sbjct: 453 HYAPFALDFALYLNENDSISFSSDTPILPLEQLLSVLPPHSFNNIPSKLAHFVLSPNSPI 512
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM-ADML 715
++ T F++D+NG+ ++GI LP ID L V +E +L + +RN ++ ++L
Sbjct: 513 LHYFNTSFKIDINGENKLYKGIPLLPNIDIDLLHSFVFDLELSLPPSDFKRNILLPFNIL 572
Query: 716 FVL--LSHPLSASIYTL 730
+V S PL + I +L
Sbjct: 573 YVTKNSSLPLFSKIQSL 589
>gi|123469088|ref|XP_001317758.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900500|gb|EAY05535.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1020
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 203/429 (47%), Gaps = 94/429 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW+ ++YPLV + D ++P + D Y+D N II+
Sbjct: 1 MGVPGFYRWVTQRYPLVRRRM--------------NDPARP-----KIDYFYIDFNCIIY 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ T ++F + Y+D L +++P+ +L++++DG AP AK QQRSRRF
Sbjct: 42 NALRSISMSSGGTILQLFNEVCRYLDVLVQVIKPQIVLFISVDGPAPFAKCTQQRSRRFV 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A++D+ +A F++ I+ GT FM L L Y
Sbjct: 102 AARDSVGAA-------------------------FNTTAISVGTTFMEDLHQHLLEYFKR 136
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
++N+D W ++I S PGEGEHK +Y+R R YDPN+ HC+Y DADLI LA
Sbjct: 137 KVNSDRAWSTPQLIYSSHRTPGEGEHKFFNYIREIRKTADYDPNSTHCIYSPDADLIFLA 196
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK-AKRKAGEFDEKGDEVVVPK 299
L + E + I+RE G P N GK AK K G D
Sbjct: 197 LQSKEKYIYIMREWDAWVG----------PNENVGN--GKLAKLKTGADD---------- 234
Query: 300 KPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
++ LH+ L+EYL Y+F P P L +VDDF F +GNDF+PH P + I+ G
Sbjct: 235 --FELLHLPILKEYLSYDF--PGIP----LSNLVDDFAGFSFLIGNDFIPHFPDVIIQHG 286
Query: 360 AINLLMAVYKKEFRALGGYL-TDG--SKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHA 416
+ ++ Y+K YL DG +KP+L +IF R+ +HQ
Sbjct: 287 DFDQVVIAYQKSLLETKQYLIVDGKFNKPAL---------------QIFL-RSVVHQLKN 330
Query: 417 ERIKREKAQ 425
+ K+EKA+
Sbjct: 331 KSKKQEKAE 339
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 10/222 (4%)
Query: 495 AIVEAENSFETDPQENKEEFKAKLKELLRD-KSDAFNSDNPEEDKVKLGEPGWKERYYEE 553
+++E + D + NK + L+ ++ K+ + + E+DK Y E
Sbjct: 298 SLLETKQYLIVDGKFNKPALQIFLRSVVHQLKNKSKKQEKAEQDKQMQNYLKTARTYISE 357
Query: 554 KFNAKTPEERE---ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKD- 609
K+ PEE + E K + + WV+ YY EG SW W + Y YAP + +
Sbjct: 358 KY----PEETKRDPEFEKKLSFSVLDSFDWVLEYYTEGCPSWTWCFQYFYAPPLIIVSEY 413
Query: 610 LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN 669
+ + + FEL P PF QLL + P S++ LP LM P SPIS +YPT F +D+N
Sbjct: 414 VLEHSSHFELSRPPLPFEQLLCILPPQSANLLPSALSSLMFSP-SPISSYYPTSFSIDLN 472
Query: 670 GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
G+ +G+ +PF+D ++ + V L E RN+I+
Sbjct: 473 GRAVEHEGVVLIPFVDVEKVRELVSSNLSKLGPNETERNTII 514
>gi|429962361|gb|ELA41905.1| hypothetical protein VICG_01089 [Vittaforma corneae ATCC 50505]
Length = 630
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 198/435 (45%), Gaps = 83/435 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLE---YDNLYLDMNG 57
MGVP+ Y+W+ ++YP V K PN E DNLYLD N
Sbjct: 1 MGVPSLYKWITQRYPEV----------------------KLKPNREEDHLTDNLYLDFNA 38
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IIHPC + T E+++ + Y+D + +RPR+LLY+++DGVAPRAK+NQQRSR
Sbjct: 39 IIHPCCNKALENMADTDTELYKNLEKYMDEVIARIRPRRLLYISVDGVAPRAKLNQQRSR 98
Query: 118 RFRASK------------DAADSAAEEERLR---QEFEREGRKLPPKSDSQ-----VFDS 157
RF ++ D + A RL QE E ++ VFD+
Sbjct: 99 RFVHAREVSEQGNFYFKDDCGNEPAHHSRLTVLDQEIENSAVSKNMSDEATPNGCGVFDT 158
Query: 158 NVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRN 217
N I+PGTEFM L LQ I +++ D W VI S VPGEGE KIM Y+R +N
Sbjct: 159 NAISPGTEFMQRLDAFLQELISFKMSFDQRWTGFNVIYSSYRVPGEGEQKIMEYIRKHQN 218
Query: 218 LPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC 277
P ++ DADLI L L+ + +LRE P H +N
Sbjct: 219 -----PKFSSVIFSPDADLIFLGLSLFDHSVMVLRE--------------EPPKHGNSN- 258
Query: 278 EGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFI 337
G + D V+V + L I + Y ++P + ++D+I
Sbjct: 259 --------GSLSNEKDFVLVDIPRLKHLIIRDFK----YVMKMP-----FNHRKFLEDWI 301
Query: 338 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV-EHFIQA 396
F+CF VGNDFLP P EIR A++ L + + + ++TD K + + E FI+
Sbjct: 302 FLCFTVGNDFLPCTPCFEIRTDALDKLTHILQTVYLNTRSFITDNGKINYDVLREFFIEC 361
Query: 397 VGSYEDRIFQKRARL 411
I +KR L
Sbjct: 362 ARRENTFIVEKRNNL 376
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGV 589
+P E+ E G K R+Y EK + KD+++ Y +GL WV +YY+ +
Sbjct: 388 DPSEEFFLETERG-KIRFYVEKMGITS-------EKDLLIACEEYIKGLEWVYNYYFYDM 439
Query: 590 CSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 649
SW+W+YPYH+APF +DL + F G P KP QLL V P +S LP +
Sbjct: 440 PSWEWYYPYHFAPFMTDLALVKDVKFKFTTGRPLKPLEQLLTVLPPSSKDLLPSCLHSVF 499
Query: 650 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
+ ++YPT+F++DM K WQ + LPFI+ L+ + ++ L E RN
Sbjct: 500 DE----FKEYYPTEFKLDMFQKCMDWQAVPILPFINVQDLIKAFENRQNELKFSECERN- 554
Query: 710 IMADMLFVLLSHPLSASIYTL 730
I +F L A IY L
Sbjct: 555 ITGYPIFYSKQPRLIAKIYPL 575
>gi|449703901|gb|EMD44256.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 670
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 205/414 (49%), Gaps = 58/414 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ + W+ + P ++ P I G + + N G EYDNLY+D NGIIH
Sbjct: 1 MGVPSLFAWVRQICP----GYVKRLPPKIQGE----EKREKNEIGEEYDNLYIDFNGIIH 52
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H E T+ +E+ + +F +DR VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 53 QCSHSEKEEEATSEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYC 112
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ + FDSN ITPGT+FM + IAL YI
Sbjct: 113 SVLNNTGG--------------------------FDSNCITPGTKFMEKIGIALHGYIVN 146
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R++ND W +KVILSD+ V GEGEHKI ++R + RHC+YG+D DLI+L
Sbjct: 147 RMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIKKNERFKEERHCIYGMDGDLIILT 206
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L + + +ILRE + +KC +CG+ K K K D + ++
Sbjct: 207 LGINIRNMTILREEQEIIKKNNKCDICGK----------KHKTK----DHGKETKLIMCY 252
Query: 301 PYQFLHIWTLRE--------YLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
P + L W + E + EI E I+ DFI + F VGNDFLP +P
Sbjct: 253 PNE-LRKWLINEAKKNLIETKKEEGEEYKEEDIEIIEEEIIKDFILISFLVGNDFLPRIP 311
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
+++I+ G + +L+ Y K + G L+ G++ ++ + + +G E I +
Sbjct: 312 SIKIQTGGMEMLLKNYWKLY-VKGKRLSKGTEINITNFKELFKMIGEEESNILK 364
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 126/257 (49%), Gaps = 14/257 (5%)
Query: 482 KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED---K 538
K RLS G I I + F+ +E K ++ +DK N D +
Sbjct: 333 KGKRLSKGTEIN--ITNFKELFKMIGEEESNILKGIIQNTKKDKEVKEYDQNIYFDSSKE 390
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KL + G+ +RYY+ FN E +++V Y EG+ W+ +YY + SW+W+Y +
Sbjct: 391 IKLNKEGYHDRYYQIHFNTTNIE----FIQNIVHHYFEGISWIFNYYLNTLPSWRWYYKF 446
Query: 599 HYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
HYAPFA D N ISF P P QLL V P S LP + P SPI
Sbjct: 447 HYAPFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPQSFINLPSKLAHFVLSPTSPI 506
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM-ADML 715
++ T F++D+NG+ ++G+ LP ID L V +EH+L E +RN ++ ++L
Sbjct: 507 LHYFNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLPPSELKRNILLPFNIL 566
Query: 716 FVL--LSHPLSASIYTL 730
+V S PL + I +L
Sbjct: 567 YVTKNSSLPLFSKIQSL 583
>gi|67480967|ref|XP_655833.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56472997|gb|EAL50447.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 666
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 205/414 (49%), Gaps = 58/414 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ + W+ + P ++ P I G + + N G EYDNLY+D NGIIH
Sbjct: 1 MGVPSLFAWVRQICP----GYVKRLPPKIQGE----EKREKNEIGEEYDNLYIDFNGIIH 52
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H E T+ +E+ + +F +DR VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 53 QCSHSEKEEEATSEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYC 112
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ + FDSN ITPGT+FM + IAL YI
Sbjct: 113 SVLNNTGG--------------------------FDSNCITPGTKFMEKIGIALHGYIVN 146
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R++ND W +KVILSD+ V GEGEHKI ++R + RHC+YG+D DLI+L
Sbjct: 147 RMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIKKNERFKEERHCIYGMDGDLIILT 206
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L + + +ILRE + +KC +CG+ K K K D + ++
Sbjct: 207 LGINIRNMTILREEQEIIKKNNKCDICGK----------KHKTK----DHGKETKLIMCY 252
Query: 301 PYQFLHIWTLRE--------YLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMP 352
P + L W + E + EI E I+ DFI + F VGNDFLP +P
Sbjct: 253 PNE-LRKWLINEAKKNLIETKKEEGEEYKEEDIEIIEEEIIKDFILISFLVGNDFLPRIP 311
Query: 353 TLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQ 406
+++I+ G + +L+ Y K + G L+ G++ ++ + + +G E I +
Sbjct: 312 SIKIQTGGMEMLLKNYWKLY-VKGKRLSKGTEINITNFKELFKMIGEEESNILK 364
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 126/257 (49%), Gaps = 14/257 (5%)
Query: 482 KVPRLSSGATIGAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEED---K 538
K RLS G I I + F+ +E K ++ +DK N D +
Sbjct: 333 KGKRLSKGTEIN--ITNFKELFKMIGEEESNILKGIIQNTKKDKEVKEYDQNIYFDSSKE 390
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KL + G+ +RYY+ FN E +++V Y EG+ W+ +YY + SW+W+Y +
Sbjct: 391 IKLNKEGYHDRYYQIHFNTTNIE----FIQNIVHHYFEGISWIFNYYLNTLPSWRWYYKF 446
Query: 599 HYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
HYAPFA D N ISF P P QLL V P S LP + P SPI
Sbjct: 447 HYAPFALDFALYLNENDSISFSSDTPILPLEQLLAVLPPQSFINLPSKLAHFVLSPTSPI 506
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM-ADML 715
++ T F++D+NG+ ++G+ LP ID L V +EH+L E +RN ++ ++L
Sbjct: 507 LHYFNTSFKIDINGENKLYKGVPLLPDIDINLLHSFVFNLEHSLPPSELKRNILLPFNIL 566
Query: 716 FVL--LSHPLSASIYTL 730
+V S PL + I +L
Sbjct: 567 YVTKNSSLPLFSKIQSL 583
>gi|188501630|gb|ACD54753.1| 5-3 exoribonuclease 2 isoform 9-like protein [Adineta vaga]
Length = 510
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 188/388 (48%), Gaps = 81/388 (20%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MN II+ C + +D + DE+ Q +F+YID +F ++ PR L+YM+IDGVAP+AKM+Q+
Sbjct: 1 MNEIIYLCANLDDLSTLKSEDEIIQGVFEYIDEIFSIIHPRNLIYMSIDGVAPKAKMHQE 60
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
R + +K + SD++ F I PGT FM+ LS L
Sbjct: 61 RVSLYNYAKKHS-----------------------SDNEQFTKCDIKPGTMFMSKLSDKL 97
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
+ YIH R+N+ P W+ I VILSDANVPGEGEHK M ++R Q+ + NT H L+ D+
Sbjct: 98 RSYIHDRMNSIPAWKSIIVILSDANVPGEGEHKTMDFIRSQK---FSNSNTNHVLFSGDS 154
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
D+++L L + I+R RK + +
Sbjct: 155 DMVLLGLTMPSDNVRIMR------------------------------RKTNKIE----- 179
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
Y F + LRE + EF DL+ I+DD+IF+C GNDFLP++P++
Sbjct: 180 ------VYTFRDLKLLREEIKNEFI-------GDLKSIIDDWIFLCLLAGNDFLPNLPSI 226
Query: 355 EIREGAI-NLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQ 413
E + I N++ YK+ R YL + +P+L + ++ +G E+ K L +
Sbjct: 227 EFNQTEINNVIFDTYKEYIRKKDVYLIENMEPNLEYFKILLKHIGEIEE---DKVMSLLE 283
Query: 414 RHAERIKREKAQARRGDDVEPLAQPDSL 441
R + R+ EP+ P ++
Sbjct: 284 RSQTATNYSLDEIRKQ---EPITNPSAI 308
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
W+ +YY++KF K + + ++ +VV Y EGLCWV+HYYY+GV SW W+Y Y+Y P AS
Sbjct: 331 WQRQYYKDKFGFKGDQLKTKS-TEVVQHYAEGLCWVLHYYYKGVPSWDWYYSYYYPPLAS 389
Query: 606 DLKDLDQFNISFELGH-PFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
+L+ ++F P KP +L +FPS + LP+++++L++D S I DFY +D
Sbjct: 390 TFSNLENIPMNFNRNSKPLKPLEHMLAIFPSKYARYLPKNWQELISDMKSSIIDFYRSDP 449
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+D +GKRY Q I KLPF+DE L + +K I+ TL++EE +RN + D LF+
Sbjct: 450 AIDAHGKRYEEQYIVKLPFVDEKCLFEALKSIDSTLSKEEEKRNRLDDDHLFI 502
>gi|384483989|gb|EIE76169.1| hypothetical protein RO3G_00873 [Rhizopus delemar RA 99-880]
Length = 1163
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 204/411 (49%), Gaps = 83/411 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
M +P ++ E+YPL + E+ D I ++ + N
Sbjct: 3 MIIPKLVEFVCERYPLSSQVITEQYIPEFDITDIVYNSCQTNS----------------- 45
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
DR +++ +F+ I ++ ++P+K+ ++ +DGV PR KMNQ+RS++F+
Sbjct: 46 -----FDRYHRLNEEQILPRIFNKICYIYGQIKPKKIFFLTVDGVTPRIKMNQERSKQFQ 100
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++K++ +RE P +D V+ PGT FMA L+ L+Y +
Sbjct: 101 SAKESL------------IKRE-----PLAD-------VVLPGTAFMAKLTAQLRYLVAK 136
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+++ D W ++VI+S +VPGE +HKI Y+RL ++ YDPNT+HC+YG+ DL++++
Sbjct: 137 KISEDIEWRDVEVIVSGPDVPGESKHKIAEYIRLCKSQADYDPNTKHCMYGIRDDLLLVS 196
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
LATHE +F+++ CE + A DE+ K
Sbjct: 197 LATHEPNFALV-------------------------CEQDDAQNA---DERK------KS 222
Query: 301 PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
Y LH+ +RE L+ EF + PF+ D E I+DDF+ + ND LP + L++
Sbjct: 223 QYFLLHLSLIRECLEREFSSLKSSLPFKYDFERILDDFVLLSLITSNDLLPRLSGLQVNR 282
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH-FIQAVGSYEDRIFQKR 408
G +N+LM +YK+ Y+ +G + +L R+E F +A E ++F+++
Sbjct: 283 GGLNILMKIYKEVLPTCDDYIQNGGQITLTRLEKIFARASTIVESKLFEEQ 333
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK YY+E + + + V Y + + +YY+G+ SW+WFYPYHYAP S
Sbjct: 500 WKAAYYKEMLDIDFFAS--DLLEHAVASYILSIQLINSFYYQGILSWRWFYPYHYAPKLS 557
Query: 606 DLKDLDQFN-ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
DLKDL +F +F PF L+ V P +P Y+ LMTD SPIS FYPT F
Sbjct: 558 DLKDLGRFQGFNFPADQPFTLHEYLMAVLPPCHKRLVPVPYQGLMTDYKSPISLFYPTRF 617
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D N + I K+PF+DE +LL+ ++ + L E E R N
Sbjct: 618 YTDFNKNDLDEECIPKIPFVDEKQLLEAIQSKQGLLREHELRSN 661
>gi|68070139|ref|XP_676981.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496914|emb|CAH93788.1| conserved hypothetical protein [Plasmodium berghei]
Length = 635
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 201/466 (43%), Gaps = 106/466 (22%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHP 61
G+P Y+WL YP V E ++ G K VD Y+DMNG+IH
Sbjct: 36 GIPRMYKWLTSYYPTV------REELINYGQKKKVDI------------FYIDMNGVIHH 77
Query: 62 CFHPEDRPAPTTFD-EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C H P + E+F + Y+ LF +V+P+KL+Y+ +DGV+P+AKMNQQR RRF
Sbjct: 78 CTHANKDALPIHDEHELFSNILHYLKNLFYLVKPQKLVYIGVDGVSPKAKMNQQRKRRFL 137
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ D++ + +F+ N IT GT+FM Y I+L
Sbjct: 138 SLFKINDNSKI--------------------TNLFNPNCITTGTDFM--------YKINL 169
Query: 181 RLNNDPGWE------KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
LN +I S ++VPGEGEHKI+ ++R N HC+YGLDA
Sbjct: 170 SLNKWFKILKKKKVFNFDIIYSGSDVPGEGEHKILKFIRENCKNDSNFKNWNHCIYGLDA 229
Query: 235 DLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDE 294
DLIML+L TH + ILR+ + + + ++ E D E
Sbjct: 230 DLIMLSLVTHLNNIFILRDKFKLTNDSMHNNVVNNIEKMQSEFNVNSESDPNEVDNNEKE 289
Query: 295 VVVPK-------------------------KPYQFLHIWTLR--EYLDYEFRI------- 320
+ + + K +++ H + L E Y+F I
Sbjct: 290 ISINRELKEIDKSEENKNMGNNESLNNCFNKTHKYTHDYYLHYDELNSYDFEILDIYKLR 349
Query: 321 -----------------PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINL 363
N F I+ +VDD +F+ F VGNDFLPH+P ++I EG++N
Sbjct: 350 SSIKTQIATYINKLKKEKNIIFSINR--VVDDIVFLSFLVGNDFLPHIPNIDINEGSMNE 407
Query: 364 LMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
++ Y Y+T K + R++ ++ + E + F+KR
Sbjct: 408 ILNSYIFYIYKYSNYITYKDKVHIERLKIILKILSGQEYQYFKKRG 453
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 543 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
E +K YY KF ++ ++ +V +Y EGL W +HYY+ G SW W YPYHYAP
Sbjct: 464 EKKYKSYYYLHKFGVSDSKQIQQ----IVKKYIEGLFWNLHYYHFGCASWHWEYPYHYAP 519
Query: 603 FASDLKDLDQFNISFE--------LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
SDL ++ + FE +G P+ + L+ V P + LP+ Y+ + +
Sbjct: 520 LCSDLLSFEKSDFFFEKVTMPHKIIGKPYSAYTHLISVLPQKDKNLLPDPYKNVYAE--D 577
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
+ F+P + ++D NGK+ +W+ I LPFI+
Sbjct: 578 EVKSFFPDNVKIDPNGKKETWEYIVHLPFIN 608
>gi|219111223|ref|XP_002177363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411898|gb|EEC51826.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 156
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 116/165 (70%), Gaps = 12/165 (7%)
Query: 91 MVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS 150
+V+P+ +YMAIDGVAPRAK+NQQRSRRFR++ D A++ + L+ E +
Sbjct: 1 IVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAMDMAEATKD---LKDE---------KGN 48
Query: 151 DSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMS 210
+VFDSN ITPGTEF+A +S +QY+I ++ DP W + VI S +VPGEGEHKIM
Sbjct: 49 QREVFDSNCITPGTEFLAKVSNTIQYFIRKKIKEDPSWHGLTVIFSGHDVPGEGEHKIMQ 108
Query: 211 YVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVV 255
++R R P Y PNTRHC+YG DADLIML L THE HF+ILREV+
Sbjct: 109 HIREMRAQPNYAPNTRHCIYGQDADLIMLGLVTHEPHFTILREVI 153
>gi|67466759|ref|XP_649521.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465985|gb|EAL44135.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704666|gb|EMD44867.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 628
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 217/441 (49%), Gaps = 85/441 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ YRWL + P + E+ +D ++ NPNG E+DNLY+D+NG+IH
Sbjct: 1 MGVPSLYRWLCKTVPNLSRKAKEQ---------FDIDLTRNNPNGREFDNLYIDVNGLIH 51
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ T +EV + + + + R+ ++VRPR LLY+AIDGV P AKM QQR RRF
Sbjct: 52 SSIDKQ------TIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRFT 105
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ + N ITPGTE M +S+ ++ +I
Sbjct: 106 -------------------------------TDCLEGNAITPGTELMEKISVGIESFILN 134
Query: 181 RLNND--PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++NN W +IKVI+S +VPGEGEHKI+ Y+R Q + N H +YG DADL++
Sbjct: 135 QMNNKGLDYWRRIKVIVSGVHVPGEGEHKIIEYIRSQERI-----NESHVIYGEDADLLL 189
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE----------- 287
L+L H ILR+ T DK +P A N GK+K +
Sbjct: 190 LSLVLHYDSIFILRKD--TRQIFDKNKKGSKP---ARNGTGKSKVMKDKIKKVENEKIEK 244
Query: 288 --------FDEKGDEVVVPKKPYQFLHIWTL-REYLDYEFRIPNPPFEIDLECIVDDFIF 338
F DE ++ P++F +I + ++ L+ + N ++LE +DFI+
Sbjct: 245 EKKELKKVFGSDDDEFLI---PFEFANISLISKKLLELSSQYENSIERLELE---NDFIY 298
Query: 339 MCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG 398
+ GNDFLP++ ++I GA+N ++ +Y + + G +T+ K + V F +
Sbjct: 299 LMSIAGNDFLPNIEGIDIYAGALNTVLNIY-FQLHSKGIKITENGKVNNNGVLAFFTELA 357
Query: 399 SYEDRIFQKRARLHQRHAERI 419
+E R+ + + + + A+ I
Sbjct: 358 QHEQRLIESQMKTRRGSAQPI 378
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KLG+ G+KERY + F K EE KD V Y EG+ WV +YY SW+W Y
Sbjct: 390 IKLGQSGYKERYVQTYFMNK-----EEYIKDSVKSYLEGMNWVFNYYCGNAFSWKWGYKC 444
Query: 599 HYAPFASDLKDLDQ---FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
HYAP D Q F E P P QL+ V P S H +P+ +++ P
Sbjct: 445 HYAPLLCHFVDYFQPVEFTTIAEDDGPIHPIEQLIAVLPPKSIHLIPKQLQEIYNLP--E 502
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
P +D +G+ S++GIA + F D + + V+ L + E RN + ++L
Sbjct: 503 FKKTIPEQVIIDAHGQDVSYKGIALVGFPDISLIHQYVESHIKELNKLEVIRNQLSQEVL 562
Query: 716 FVLLSHPLSASI 727
FV P ++I
Sbjct: 563 FVYNKIPNFSTI 574
>gi|145552342|ref|XP_001461847.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429683|emb|CAK94474.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 196/387 (50%), Gaps = 83/387 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FY W+ EK D YLDMN II+
Sbjct: 1 MGVPNFYSWVNEK---------------------------------RVDYFYLDMNQIIY 27
Query: 61 PCFHP-----EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQR 115
C +D+ FD+V+ + +Y+D + +V P++LL++A DGVAPRAKMNQQR
Sbjct: 28 KCATDPSVLFKDQLRERDFDDVWVSIINYLDMIINLVNPQQLLFLAFDGVAPRAKMNQQR 87
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
RRF++ K +A +++ F++ ++ + +N +PGTEFM L+ ++
Sbjct: 88 QRRFQSQKRYKYLSAHLQQIGL-FQK----------NETYKNNQFSPGTEFMTQLNQQIK 136
Query: 176 YYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDAD 235
+YI + + DP ++ +K+I S +VPGEGEHK++S++R + +DPN+ H +YG DAD
Sbjct: 137 FYIERKYSEDPKFKNLKIIFSGCDVPGEGEHKLLSFIRNMQ----FDPNSVHMIYGADAD 192
Query: 236 LIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEV 295
LIML L T + I+RE D F Q AAN
Sbjct: 193 LIMLGLLTQLKNVLIIRE--------DLKF--KQTASAAAN------------------R 224
Query: 296 VVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDFLPHMPT 353
V+ + ++I +REYLD EF + ++ D+ I+DDFI +CFFVGNDFLP +
Sbjct: 225 VIKIPEFLVINISIVREYLDLEFAVLKDKMKVAYDIHRIIDDFILLCFFVGNDFLPRIYC 284
Query: 354 LEIREGAINLLMAVYKKEFRALGGYLT 380
+IR G I L+ ++KK Y+
Sbjct: 285 FDIRIGTIEPLVDLFKKHLTNANDYIV 311
>gi|238609845|ref|XP_002397575.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
gi|215472342|gb|EEB98505.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
Length = 150
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
Query: 549 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK 608
RYY++KF + ++ E RK + Y EG+ WV+ YYY+G SWQW+YPYH+APFA+D +
Sbjct: 1 RYYQQKFGVEYTDK--EFRKKLTQSYVEGMSWVLCYYYQGTPSWQWYYPYHFAPFAADFE 58
Query: 609 DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDM 668
++D+ NI FE+G PFKP+ QL+GVFP+AS +P+ + LMT+ SPI DFYP+ F+VDM
Sbjct: 59 EVDEMNIHFEIGQPFKPYEQLMGVFPAASRKHIPDPFHHLMTEEESPIIDFYPSTFQVDM 118
Query: 669 NGKRYSWQGIAKLPFIDEARLLDEVK 694
NGK+ +WQGIA LPFIDE RLLD ++
Sbjct: 119 NGKKMAWQGIALLPFIDEKRLLDSMR 144
>gi|407040580|gb|EKE40208.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 628
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 216/441 (48%), Gaps = 85/441 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ YRWL + P + E +D ++ NPNG E+DNLY+D+NG+IH
Sbjct: 1 MGVPSLYRWLCKTVPNLSRKAKEH---------FDIDLTRNNPNGREFDNLYIDVNGLIH 51
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ T +EV + + + + R+ ++VRPR LLY+AIDGV P AKM QQR RRF
Sbjct: 52 SSIDKQ------TIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRFT 105
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ + N ITPGTE M +S+ ++ +I
Sbjct: 106 -------------------------------TDCLEGNAITPGTELMEKISVGIESFILN 134
Query: 181 RLNND--PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++NN W +IKVI+S +VPGEGEHKI+ Y+R Q + N H +YG DADL++
Sbjct: 135 QMNNKGLDYWRRIKVIVSGVHVPGEGEHKIIEYIRSQERI-----NESHVIYGEDADLLL 189
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE----------- 287
L+L H ILR+ T DK +P A N GK+K +
Sbjct: 190 LSLVLHYDSIFILRKD--TRQIFDKNKKGSKP---ARNGTGKSKVMKDKIKKVENEKIEK 244
Query: 288 --------FDEKGDEVVVPKKPYQFLHIWTL-REYLDYEFRIPNPPFEIDLECIVDDFIF 338
F DE ++ P++F +I + ++ L+ + N ++LE +DFI+
Sbjct: 245 EKKELKKVFGSDDDEFLI---PFEFANISLISKKLLELSSQYENSIERLELE---NDFIY 298
Query: 339 MCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG 398
+ GNDFLP++ ++I GA+N ++ +Y + + G +T+ K + V F +
Sbjct: 299 LMSIAGNDFLPNIEGIDIYAGALNTVLNIY-FQLHSKGIKITENGKVNNNGVLAFFTELA 357
Query: 399 SYEDRIFQKRARLHQRHAERI 419
+E R+ + + + + A+ I
Sbjct: 358 QHEQRLIESQMKTRRGSAQPI 378
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KLG+ G+KERY + F K EE KD V Y EG+ WV +YY SW+W Y
Sbjct: 390 IKLGQSGYKERYVQTYFMNK-----EEYIKDSVKSYLEGMNWVFNYYCGNAFSWKWGYKC 444
Query: 599 HYAPFASDLKDLDQ---FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
HYAP D Q E P P QL+ V P S H +P+ +++ P
Sbjct: 445 HYAPLLCHFVDYFQPVELTTIAEDDGPIHPIEQLIAVLPPKSIHLIPKQLQEIYNLP--E 502
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
P +D +G+ S++GIA + F D + + V+ L + E RN + ++L
Sbjct: 503 FKKTIPEHVIIDAHGQDVSYKGIALVGFPDISLIHQYVEDHIKELNKLEVIRNQLSQEVL 562
Query: 716 FVLLSHPLSASI 727
FV P ++I
Sbjct: 563 FVYNKIPNFSTI 574
>gi|221055850|ref|XP_002259063.1| 5'-3' exoribonuclease [Plasmodium knowlesi strain H]
gi|193809134|emb|CAQ39836.1| 5'-3' exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 648
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 208/460 (45%), Gaps = 93/460 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
G+P Y+WL YP V EE + DG K E D Y+DMNG+IH
Sbjct: 61 FGIPRMYKWLTSYYPTV-----REELMTNDGQK-------------EVDIFYVDMNGVIH 102
Query: 61 PCFHPEDRPAPTTFD-EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H P + E+ + Y+ LF +V+PRKL+Y+ +DGV+P+AKMNQQR RRF
Sbjct: 103 HCTHANKETLPVHDEHELLSNILKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRKRRF 162
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+ +D++ + + +F+ N IT GT+FM ++++L +
Sbjct: 163 LSLFKVSDNS--------------------NGTNLFNPNCITTGTDFMYKINLSLNKWFQ 202
Query: 180 LRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+ + VI S ++VPGEGEHKI+ ++R N HC+YGLDADLIML
Sbjct: 203 ILKKKEIF--PFDVIFSGSDVPGEGEHKILKFIRENCKRDVAFRNYSHCIYGLDADLIML 260
Query: 240 ALATHEVHFSILREVV-------------FTPGQQD-----KCFLCGQPGHLAANCEGKA 281
+L TH + ILR+ F Q+D + Q G + E
Sbjct: 261 SLVTHLNNIFILRDKYKMTNDSQVTLLENFEKAQRDFDQAKESQNTYQGGDMDKTNERDN 320
Query: 282 KRKAGEFDEKGDEVVVP--KKPYQFLHIWTLREYLD------YEFRI------------- 320
E D D + P + P+ +H +T Y++ Y+F I
Sbjct: 321 VDNTNEADSSLDSALPPAQRNPFCRIHHYTQDYYVNCEPLNSYDFEILDVYKLRNSIRTQ 380
Query: 321 -----------PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 369
N F I +VDD +F+ F VGNDFLP +P ++I EG++N ++ Y
Sbjct: 381 IATYINKLKKEKNVIFNISR--VVDDIVFLSFLVGNDFLPQIPHIDINEGSMNEILNAYI 438
Query: 370 KEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
Y+T K ++R++ ++ + + E F KR
Sbjct: 439 YYIYRYNNYITLKDKVHIQRLKIILKILSAQEFSYFLKRG 478
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 7/175 (4%)
Query: 512 EEFKAKLKELLRDKSDAFNSDNPEEDKVKLG-EPGWKERYYEEKFNAKTPEEREETRKDV 570
+ K LK L + F EE+ ++ E +K YY +KF + P++ + +
Sbjct: 457 QRLKIILKILSAQEFSYFLKRGNEENILEFTDERRYKSYYYLQKFGVEDPKQIQH----I 512
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
V +Y EGL W +HYY+ G SW W YPYHYAP SDL ++ + FE G P+ + L+
Sbjct: 513 VKKYIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLI 572
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
V P ++ LPE Y+ + ++ + F+P + +D NGK+ +W+ I LPFI+
Sbjct: 573 SVLPQKDNNLLPEAYKNIYSE--DEVKSFFPENVRIDPNGKKETWEYIVHLPFIN 625
>gi|167379332|ref|XP_001735097.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903060|gb|EDR28720.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 628
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 212/438 (48%), Gaps = 79/438 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ YRWL + P + IE +D ++ NPNG E+DNLY+D+NG+IH
Sbjct: 1 MGVPSLYRWLCKTVPNLSRRAIEH---------FDIDLTRNNPNGREFDNLYIDVNGLIH 51
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ T +EV + + + + R+ ++VRPR LLY+AIDGV P AKM QQR RRF
Sbjct: 52 NSIDKQ------TIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRF- 104
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ + N ITPGTE M +S ++ +I
Sbjct: 105 ------------------------------TTDCLEGNAITPGTELMEKISTGIESFILN 134
Query: 181 RLNND--PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++NN W ++KVI+S +VPGEGEHKI+ Y+R Q N H +YG DADL++
Sbjct: 135 QMNNKGLDYWRRVKVIVSGVHVPGEGEHKIIEYIRSQER-----TNESHVIYGEDADLLL 189
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANC-------------EGKAKRK- 284
L+L H ILR+ T DK +P E AK K
Sbjct: 190 LSLVLHYDSIFILRKD--TRQIFDKSKKGSKPARNGIGKSKVIKDKIKKIENEKVAKEKK 247
Query: 285 --AGEFDEKGDEVVVPKKPYQFLHIWTLREYL-DYEFRIPNPPFEIDLECIVDDFIFMCF 341
F DE ++ P++F +I + + L + + NP ++LE +DFI++
Sbjct: 248 ELKKVFGSDDDEFLI---PFEFANISLISKRLSELSSQYGNPIERLELE---NDFIYLMS 301
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
GNDFLP++ ++I GA+N +++ Y + + G +T+ K + V F + YE
Sbjct: 302 IAGNDFLPNIEGIDIYAGALNTVLSTY-FQLHSKGIKITENGKVNNNGVHTFFIELVQYE 360
Query: 402 DRIFQKRARLHQRHAERI 419
++ + + + + A+ I
Sbjct: 361 QKLIENQMKTRRGSAQPI 378
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
+KLG+ G+KERY + F K EE KD V Y EG+ WV +YY SW+W Y
Sbjct: 390 IKLGQSGYKERYVQTYFMNK-----EEYIKDTVKSYLEGMNWVFNYYCGNTFSWKWGYKP 444
Query: 599 HYAPFASDLKDLDQ---FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSP 655
HYAP D Q E P P QL+ V P S H +P+ + + P
Sbjct: 445 HYAPLLCHFVDYFQPIEVTTIAEDDGPVHPIEQLIAVLPPKSIHLIPKPLQAIYNLPE-- 502
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
P +D++G+ S++G + F D + + V++ L + E RN + ++L
Sbjct: 503 FKKTIPEHVIIDVHGQDVSYKGTPLVGFPDISLIHQYVEEHIKELNKLELIRNQLSQEVL 562
Query: 716 FVLLSHP 722
FV P
Sbjct: 563 FVYYKIP 569
>gi|291236957|ref|XP_002738405.1| PREDICTED: C. briggsae CBR-XRN-2 protein-like [Saccoglossus
kowalevskii]
Length = 1810
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 174/343 (50%), Gaps = 67/343 (19%)
Query: 69 PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADS 128
P P +E F+ M +ID L +VRP+K+LY+A+DGV P AK N +RSRRF + K+ S
Sbjct: 40 PLPINEEEKFEGMSKFIDMLMEIVRPKKMLYIAVDGVTPFAKNNSRRSRRFLSDKEERMS 99
Query: 129 AAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGW 188
E + + E + + +D F+ N+I PGT+FM+ L + L YI ++N P W
Sbjct: 100 DTELDLIWHE--KGFSESESSADELEFNRNLICPGTKFMSRLHVHLHEYIANKINTQPSW 157
Query: 189 EKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHF 248
IKVILSDA VPGEGEHKIM VR Q+ P +D N+RHC+Y D LATHE +
Sbjct: 158 VGIKVILSDATVPGEGEHKIMEIVRRQKATPTHDINSRHCIYSND------GLATHEPNL 211
Query: 249 SILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIW 308
SI+R+ + L C+ K PY F+
Sbjct: 212 SIIRKEI----------------PLGDWCKDKV-------------------PYFFI--- 233
Query: 309 TLREYLDYEFRIPNPPFEI-DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367
T + L+ E + + ++ +DD++F+C +GNDFLP +P+L I E A++ L+ +
Sbjct: 234 TKLQCLEKEMYVAGLGSGVHNINRTIDDWVFLCCLLGNDFLPKLPSLNINEKALDRLIRM 293
Query: 368 YKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
YK V H + +G ED IF++R R
Sbjct: 294 YKTA------------------VTHTM--LGKEEDVIFRERRR 316
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 100/151 (66%), Gaps = 4/151 (2%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y +GLCW+ YYY G SWQWFYPYHYAPFA D ++ FE+G P KP QL+ +
Sbjct: 324 YVKGLCWISMYYYHGCPSWQWFYPYHYAPFAMDFINITNLQNDFEVGEPLKPLEQLMAIL 383
Query: 634 PSASSHALPEHYRKLMTDP--NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLD 691
++ H LP +R LMTD +SPISDFYP DFE D+NG++Y+ +G+A++PF+DE RL +
Sbjct: 384 TPSNDHLLPTTWRPLMTDELGDSPISDFYPDDFETDLNGEKYTSRGVARIPFVDETRLKE 443
Query: 692 EVKKIEHTLTEEEARRNSIMADMLFVLLSHP 722
++ + LT +E RN + +F+ +HP
Sbjct: 444 ALEGLH--LTRDEECRNRFGHNAVFLDATHP 472
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
Query: 536 EDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWF 595
ED V+LG GWK+RYYE KF+ +P E ++ Y +GLCW+ YY+ G SWQWF
Sbjct: 1341 EDNVRLGMDGWKDRYYEYKFDV-SPSHEPEFINNLADSYVKGLCWISMYYFHGCPSWQWF 1399
Query: 596 YPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP--N 653
YPYHYAPFA D K++ FE+G P KP QL+ + P ++ H LP +R LM +
Sbjct: 1400 YPYHYAPFAMDFKNITHLQNDFEVGEPLKPLEQLMAILPPSNDHLLPITWRPLMIGEPGD 1459
Query: 654 SPISDFYPTDFEVDMNG 670
SPI DFYP DFE+D++G
Sbjct: 1460 SPIRDFYPGDFEIDLSG 1476
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 160/370 (43%), Gaps = 125/370 (33%)
Query: 69 PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF-RASKDAAD 127
P P + +E F+ M +ID L +VRP+K+L++A++GV P AK N +R ++F KD
Sbjct: 1048 PLPISEEEKFEGMSKFIDTLMEIVRPKKMLFIAMEGVTPFAKNNNRRQKKFLNYKKDREA 1107
Query: 128 SAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPG 187
A E R EF FD N + PGT+FM+ L + L+ YI R+ P
Sbjct: 1108 EAGIERRSADEF--------------GFDYNSLCPGTDFMSRLHVHLRAYIADRIRTQPR 1153
Query: 188 WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVH 247
W IKVILSDA+VPGEGEHKIM
Sbjct: 1154 WVGIKVILSDASVPGEGEHKIME------------------------------------- 1176
Query: 248 FSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHI 307
I+R Q GH+ +CE A R+ E VV ++ F+H+
Sbjct: 1177 --IIR---------------SQRGHIVRDCEN-APRQERE--------VVQEEKLIFVHL 1210
Query: 308 WTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367
LR+ +DD++F+C +GNDFLP +P+L I+EGA++ L+ +
Sbjct: 1211 KVLRKR------------------TIDDWVFLCCLLGNDFLPKLPSLNIKEGALDRLVRM 1252
Query: 368 YKKEFR----------------ALGG-------------YLTDGSKPSLRRVEHFIQAVG 398
YK AL G YLTD +L ++ + +G
Sbjct: 1253 YKTAVTHTMINDLKSKIRELSLALDGKSEEIDPDDGDKRYLTDNGIVNLHMLQMILTELG 1312
Query: 399 SYEDRIFQKR 408
ED IF++R
Sbjct: 1313 KEEDVIFRER 1322
>gi|123410059|ref|XP_001303596.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121884988|gb|EAX90666.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1018
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 176/371 (47%), Gaps = 72/371 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW+ ++YP+V + D S+P N LY+DMNGI +
Sbjct: 1 MGVPGFYRWMVQRYPMVRRKM--------------ADPSRPIIN-----RLYIDMNGIFY 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ +F Y D L + RP L+++A+DG AP AK +QQRSRR+
Sbjct: 42 KALAATGTGNEDLTPALKAEIFRYTDMLVQICRPTDLIFIAVDGPAPNAKASQQRSRRYL 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A++D + ++ FD I+PGT FM L+ AL +I
Sbjct: 102 AARDHSMNS-------------------------FDRTQISPGTVFMDKLNDALMEFIKD 136
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+ D W + +VI S + V GEGEHKI+ ++R R + +DP+ HCLY DADLI L
Sbjct: 137 KREKDRTWSRPRVIYSSSFVAGEGEHKILDFIREGRAISDWDPDLVHCLYSTDADLIFLG 196
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L THE + +LRE AAN + + F+ K
Sbjct: 197 LQTHEKNILLLREAD------------------AANFQ----KSLSPFEAKTAITNYSFD 234
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEID-LECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
++ +H LREYL +F ID +E ++DDFI + F +GNDF+P ++IR G
Sbjct: 235 AFELIHFPLLREYLLLDFGC-----GIDEIEKVIDDFIAISFLIGNDFIPSFTDIDIRSG 289
Query: 360 AINLLMAVYKK 370
N ++ Y+K
Sbjct: 290 DYNDVIDQYRK 300
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 564 EETRKDVVLRYTEGLC------------WVMHYYYEGVCSWQWFYPYHYAP-FASDLKDL 610
EE++KD + GLC WV+ YY G SW W YPY YAP + +
Sbjct: 364 EESQKDYL-----GLCREMSKSILDAFYWVLRYYNSGCISWTWSYPYLYAPPLEVVIPFI 418
Query: 611 DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNG 670
D++ FE G P PF Q L +FP S+H +PE LM P SPI+ FYP FE D+NG
Sbjct: 419 DEYKPEFETGKPNLPFLQQLSIFPPQSAHLMPEPLANLMKAP-SPIAKFYPEKFETDLNG 477
Query: 671 KRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
K+ + + LP +D A + + + + + E+ +RN +
Sbjct: 478 KKAEYHAVVVLPILDYAAIQEAYESVISQVDAEDLKRNRL 517
>gi|145507550|ref|XP_001439730.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406925|emb|CAK72333.1| unnamed protein product [Paramecium tetraurelia]
Length = 394
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 146/279 (52%), Gaps = 28/279 (10%)
Query: 511 KEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDV 570
K K KL E+ + + D S ++ K +K+RYY+EKF K P + E + +
Sbjct: 61 KSALKDKLTEINQQEIDQAQSAKSSQELKKWKSVSYKQRYYQEKFGIK-PTQFSEFQHRI 119
Query: 571 VLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLL 630
+ Y E L W + YYY+G W WFYPYHYAPFA DL +LDQ F L PFKP+ QLL
Sbjct: 120 KISYLEALAWTLKYYYQGCVDWGWFYPYHYAPFAQDLTNLDQCMFEFSLNTPFKPYQQLL 179
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
V P S+ LP Y++LM + +S I+DFYPTDF VD+ GK+++W G LPF+D RL+
Sbjct: 180 AVLPPQSAQFLPRPYQQLMLESSSSIADFYPTDFVVDLKGKKFAWLGEVVLPFVDADRLI 239
Query: 691 DEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN 750
I L++ E R+ + ++F L H + + +Q I+ +V+ R
Sbjct: 240 S-ASNIGVNLSKLEQERDRLGQTLIFSLKKHEIF--------NFQQCHIQAQVDWLPRF- 289
Query: 751 PELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQVL 789
P +SP+ +M +I+ NQ++
Sbjct: 290 -----------------PVGSEIKSPIPTMGNILNNQII 311
>gi|397626482|gb|EJK68154.1| hypothetical protein THAOC_10694 [Thalassiosira oceanica]
Length = 759
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 147/253 (58%), Gaps = 13/253 (5%)
Query: 484 PRLSSGATIGAAIVEAENSFETDPQE---NKEEFKAKLKELLRDKSDAFNSDNPEEDKVK 540
P +++ A EAE + E D ++ ++ K K+K+L + K D + + +D V+
Sbjct: 46 PEITASAGADDDDEEAEFAPEIDVEKLDAAAKDMKEKIKKLEQTKLDDYAKN--VKDNVR 103
Query: 541 LGEPGWKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGVCSWQWFYPYH 599
L EPGWK+RYY +K K + RE ++ + R Y +GLCWVM YYY+G SW+W+YP+H
Sbjct: 104 LHEPGWKDRYYTDK--CKADDVREHGGREHLFRSYVKGLCWVMRYYYDGCPSWKWYYPFH 161
Query: 600 YAPFASDLKDLDQFNIS---FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
YAPFASDL+++++F F+ PF P QL+ V P S HA+P+ R LM D SPI
Sbjct: 162 YAPFASDLRNIERFQKDCDIFDKSEPFGPVEQLMAVLPEDSRHAVPKGSRWLMRDSESPI 221
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
DFYP D D NGK W + LPFIDE RLLD ++ T++E NS D +
Sbjct: 222 IDFYPKDVPCDPNGKAMPWLWVVLLPFIDEGRLLDALRPTMAKWTQKELLCNSRGLDDGY 281
Query: 717 VLL--SHPLSASI 727
V L +PL+ +
Sbjct: 282 VFLHKDNPLADKV 294
>gi|281201939|gb|EFA76147.1| hypothetical protein PPL_10728 [Polysphondylium pallidum PN500]
Length = 2230
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 158/317 (49%), Gaps = 36/317 (11%)
Query: 1 MGVPAFYRWLAEKYPLVVAD-----------VIEEEPVVIDGVKIPVDTSKPNPNGLEYD 49
MGVP+FY+WL EKYP + + + L +
Sbjct: 1 MGVPSFYKWLTEKYPKITCTNYLLENIENNNNNDNNNNENGNGNNNNNHGNKEKKKLRLN 60
Query: 50 NLYLDMNGIIHPCFHPEDRP--APTTFDEVFQC-MFDYIDRLFVMVRPRKLLYMAIDGVA 106
NLY+DMNG+IH H ++ +P D+V + + +D L V+P LLY+A+DGV
Sbjct: 61 NLYIDMNGVIHNSTHAKNSTTLSPVESDDVCRMNLLKNLDELVGTVQPTNLLYIAMDGVP 120
Query: 107 PRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 166
PRAK +QR RRFR++KDA D+ + ++LP + FDSN I+P TEF
Sbjct: 121 PRAKAIEQRKRRFRSAKDAKDALS-------------KRLPSDPVFEPFDSNCISPATEF 167
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
M ++ + Y + P + +++SDA+VPGEGEHKI+ ++R R + +T
Sbjct: 168 MCKVNEWVLTYAQALVKRMPS---VSIVVSDASVPGEGEHKIIDFIRAHRE--HWPSDTS 222
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
H YG+DADLI L L+T HF +LR++ G Q C C GHL CE +K
Sbjct: 223 HVFYGMDADLIFLGLSTQLSHFFVLRDL----GAQIYCSTCKNNGHLCYECECAVAKKRM 278
Query: 287 EFDEKGDEVVVPKKPYQ 303
E+ + + P Q
Sbjct: 279 NDPERSSRLSIRNIPIQ 295
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 549 RYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLK 608
YY+ K T ++ EET D+ + +GL WV+ YY G +W W+YPYHYAP SDL
Sbjct: 706 NYYKLKIGV-TIDKVEETANDICKAFVDGLAWVLRYYTVGCPAWSWYYPYHYAPLISDLA 764
Query: 609 DL---------DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDF 659
D +I F+ G P +P+ LL V P SS LP + +P+S
Sbjct: 765 KFVEKQSQVYNDTKHIVFDYGAPLEPYIHLLSVLPHYSSKLLPPKLADSIVREPAPLSRL 824
Query: 660 YPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK-IEHTLTEEEARRNSIMAD 713
+ F +D NG+ SW+G+ L FI+ L + I+ L+ EE RN D
Sbjct: 825 FEERFRIDPNGEEVSWKGVVLLDFINTNVLKEHASPIIKDQLSAEELERNKFGKD 879
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 302 YQFLHIWTLREYLDYEFRI---PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ F+++ L+EY Y + +D +++DF MC +GNDFLPH+PT+ I+E
Sbjct: 557 FDFVNLDYLKEYFRYSVLSGLSESVASRVDCNRMINDFTMMCMLLGNDFLPHLPTMAIKE 616
Query: 359 GAINLLMAVYK------KEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF-QKRARL 411
G+I L+M Y+ K+ + YLTDG + + + + +E F K ++
Sbjct: 617 GSIELMMTWYRDWLSSFKDESSTIQYLTDGPNINYKPFHKLLLMLSKWESLYFPDKLEKM 676
Query: 412 HQRHAERI 419
+++ R+
Sbjct: 677 YKKEIFRL 684
>gi|385303535|gb|EIF47601.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 646
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 131/224 (58%), Gaps = 5/224 (2%)
Query: 493 GAAIVEAENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYE 552
G + E++ F+ ++ +FK + ++ D + +K L WK +YY+
Sbjct: 55 GISAXESDEEFKQRAEDIHSQFKRYQRSIVVDSEKTLTEEKDLYNKKFLD---WKNQYYK 111
Query: 553 EKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 612
EK + +E + T D+ Y EGL WV++YYY+GVCSW W+Y YHYAP SD+
Sbjct: 112 EKLHFTLDDEDKIT--DLTENYVEGLQWVLNYYYKGVCSWPWYYHYHYAPRISDVSRGLG 169
Query: 613 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
++F++G PFKPF QL+GV P+ S LP Y++LMTD SPI DFYP D E DMNGK
Sbjct: 170 VKLNFKMGQPFKPFQQLMGVLPARSRRLLPACYQELMTDAKSPIIDFYPNDCETDMNGKT 229
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
W+ + L F+DE RL+ + ++ LT EE +RN+ ++LF
Sbjct: 230 APWEAVVLLSFVDEKRLIKVMTPLDKYLTPEEKQRNTFGRNLLF 273
>gi|395510109|ref|XP_003759325.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 117
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 97/114 (85%)
Query: 26 PVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYI 85
P +GVKIPVDTSKPNPN +E+DNLYLDMNGIIHPC HPED+PAP DE+ +F+YI
Sbjct: 1 PKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 60
Query: 86 DRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
DRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRASK+ ++ E++R+R+E
Sbjct: 61 DRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEATIEKQRVREEI 114
>gi|269861191|ref|XP_002650309.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
gi|220066257|gb|EED43747.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
Length = 623
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 184/393 (46%), Gaps = 60/393 (15%)
Query: 49 DNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPR 108
DNLYLD N IIHPC + E + ++++ + Y+D L +P+KL+Y+AIDGVAP+
Sbjct: 10 DNLYLDFNAIIHPCTNRELKDLDKLNEDLYHNLEAYLDALIAYCKPKKLIYIAIDGVAPK 69
Query: 109 AKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 168
AKMNQQR+RRFR +K+ ++ + E K FD N ITPGT FM
Sbjct: 70 AKMNQQRTRRFRGAKEVYENNI-------VYLDEHEKYDNPYLEVAFDHNAITPGTIFME 122
Query: 169 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR-- 226
L + I +L+ DP W VI S+ VPGEGE KIM Y+R+ + N R
Sbjct: 123 QLDEFISNLIQFKLSTDPLWANKTVIYSNYKVPGEGEQKIMEYLRIHK------KNLRES 176
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVF----TPGQQDKCFLCGQPGHLAANCEGKAK 282
H +Y DADLI L L + I+RE V T +D+ +L H E K K
Sbjct: 177 HVIYSPDADLIFLGLTLPNYNIRIMREEVKYKEDTEIPKDRNYL---DNHFVLINENKLK 233
Query: 283 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 342
L I L+ L+ F + E ++ DFIF+CF
Sbjct: 234 N---------------------LIIDQLKTGLEDNF---------NGERLLFDFIFLCFT 263
Query: 343 VGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD-GSKPSLRRV-EHFIQAVGSY 400
+GNDFLP P EIR A+ + + ++ Y+TD G + + + E FI+
Sbjct: 264 IGNDFLPSAPCFEIRTNAVEKIAEFLIRAYKRSRTYITDFGGIVNFKALKEFFIECEKDE 323
Query: 401 EDRIFQKRARLHQRHAERIKREKAQARRGDDVE 433
+ +KR L + R + +DVE
Sbjct: 324 NINLKEKRINLQK------SRNRMDLEFNEDVE 350
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 37/216 (17%)
Query: 535 EEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQW 594
E+ + ++ E K +YY EK + + E+ K+ Y +G+ W+ YY+ SW +
Sbjct: 347 EDVEFEICEEEGKLKYYIEKMDINSEEKLMIACKE----YIKGMVWIYQYYFFNCPSWDY 402
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD--- 651
+YPY++APF DL L+ N+ F P KPF QLL V P+ S H LPE YRK D
Sbjct: 403 YYPYYFAPFMFDLMALEVENLYFTPSKPLKPFEQLLCVLPALSMHLLPEPYRKYYYDNKM 462
Query: 652 ----------PNSPISDF---YPT-----------------DFEVDMNGKRYSWQGIAKL 681
N I ++ Y T +F++D K +WQ A +
Sbjct: 463 IKLLVPGELTKNGYIKEYNSIYKTNNNENYNLKDIFEFPDLNFKIDSFHKIMNWQYTAII 522
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
PF++ +L+ +K +++LT EE RN I +LF
Sbjct: 523 PFVNNKNILEYSRKYQNSLTYEEINRNIIGFPVLFT 558
>gi|154317860|ref|XP_001558249.1| hypothetical protein BC1G_02913 [Botryotinia fuckeliana B05.10]
Length = 945
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK++YYE KF E E T+ + Y +GL WV++YYY GV SW W+Y YHY+P S
Sbjct: 62 WKDKYYEGKFEWDRKNEIELTK--LCENYVQGLQWVLYYYYRGVVSWPWYYQYHYSPMIS 119
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ + +++F+LG PF PF QL+GV P S +P Y LMT+P SPI DFYP DFE
Sbjct: 120 DVIKGLKADVNFKLGQPFHPFEQLMGVLPDRSKKIVPTVYHDLMTNPASPIIDFYPRDFE 179
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFIDE RLLD + + L++ E RN + F
Sbjct: 180 LDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAEKFRNEFGVSLKFT 231
>gi|315049287|ref|XP_003174018.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
gi|311341985|gb|EFR01188.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
Length = 1424
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
WK++YY+ KF E EE RK + Y +GL WV+ YYY GV SW WFY YHYAP S
Sbjct: 509 WKDKYYKGKFGWGL-ENAEEMRK-LTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMIS 566
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFE 665
D+ ++ F+LG PF PF QL+GV P S +P + LMT P SPI DFYP DFE
Sbjct: 567 DIHLGLGADVDFKLGQPFFPFQQLMGVLPDRSKKIVPVAFHSLMTTPESPIIDFYPRDFE 626
Query: 666 VDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
+DMNGK+ W+ + K+PFI+E RLL + EH LT +E RNS + F
Sbjct: 627 LDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPDEKARNSFGVTLKFT 678
>gi|47198701|emb|CAF89019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 138/247 (55%), Gaps = 41/247 (16%)
Query: 163 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANV---------PGEGEHKIMSYVR 213
GT+FMA L L+Y++H +L+ D W+ ++V LS V PGEGEHKIM ++R
Sbjct: 1 GTDFMARLQEQLEYFVHSKLSTDKLWQNVRVYLSGHEVRSQSTPTLTPGEGEHKIMEFIR 60
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHL 273
+ N PG+DPNTRHCLYGLDADLIML L +HE +FS+LRE V G++ +
Sbjct: 61 SENNGPGHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGKKSQ---------- 110
Query: 274 AANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRIPNPPF--EIDLE 330
KR + P++ + LH+ +REY+DYEF + DLE
Sbjct: 111 --------KR-----------ITAPEETTFHLLHLSLMREYIDYEFSVLRNHLGSTYDLE 151
Query: 331 CIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 390
I+DD+I M F +GNDF+PH+P L I A+ LL Y +L GYL + +L+
Sbjct: 152 RIIDDWILMGFLIGNDFIPHLPHLHISHDALPLLYKTYISVLPSLRGYLNENGNLNLKNF 211
Query: 391 EHFIQAV 397
E +++ +
Sbjct: 212 EKYLEKL 218
>gi|193784826|dbj|BAG53979.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 133/244 (54%), Gaps = 33/244 (13%)
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
MA L L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTR
Sbjct: 1 MARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTR 60
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
HCLYGLDADLIML L +HE HFS+LRE V G+
Sbjct: 61 HCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGK-------------------------- 94
Query: 287 EFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFV 343
K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F V
Sbjct: 95 ----KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLV 150
Query: 344 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 403
GNDF+PH+P L I A+ LL Y LGGY+ + +L R E ++ + ++
Sbjct: 151 GNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDRE 210
Query: 404 IFQK 407
F +
Sbjct: 211 HFSE 214
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 97/135 (71%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + + W++HYYY GV SW W+YPYHYAPF SD+ ++ I FELG PFKPF QLL V
Sbjct: 320 YVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVL 379
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS + LP Y+ LMT+ +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ +
Sbjct: 380 PAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAM 439
Query: 694 KKIEHTLTEEEARRN 708
+ H+L +EE +RN
Sbjct: 440 ETCNHSLKKEERKRN 454
>gi|70946141|ref|XP_742816.1| exoribonuclease [Plasmodium chabaudi chabaudi]
gi|56522004|emb|CAH76803.1| exoribonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 742
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 152/249 (61%), Gaps = 11/249 (4%)
Query: 513 EFKAKLKELLRDKSDAFNSDNPEEDKVKLG---EPG-WKERYYEEKFNAKTPEEREETRK 568
EF LKE ++ ++ +NP+ED V+LG +P + RYY KF+ + +E K
Sbjct: 123 EFNLLLKEAIKKANEC---ENPKED-VELGADDDPNDLRARYYRSKFHLDETDNVDEFVK 178
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL + +ISFE P PF Q
Sbjct: 179 EVVYKYIEGLAWVLCYYFQACPMWHWYYPYYYAPLSSDLL-IKDISISFEEDEPLLPFEQ 237
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
LL V PS SSH LP+ YR+LM SPI DFYP F+ + NGK++ +Q I LPF+++ R
Sbjct: 238 LLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKEEENGKKFKYQWIVLLPFVEKER 297
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYT-LDEHCKQLKIKER-VEVK 746
++ + ++ TLT+EE +RN + +++ +H LS I T + + K++K KE+ VE
Sbjct: 298 IIRFARDLDDTLTDEEKKRNRRGLNKIYMSSTHILSKKITTSMRTYIKEIKDKEKNVEEI 357
Query: 747 ERLNPELSD 755
E N E ++
Sbjct: 358 ENHNAETNE 366
>gi|358389627|gb|EHK27219.1| hypothetical protein TRIVIDRAFT_207716 [Trichoderma virens Gv29-8]
Length = 904
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 119/176 (67%), Gaps = 13/176 (7%)
Query: 55 MNGIIHPCFHP---EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
MNGIIH C H ED + +E+F +F+YI+ LF ++P+KL +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKM 60
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
NQQR+RRFR + DA E+ R++ REG +LP + + FDSN ITPGTEFMA LS
Sbjct: 61 NQQRARRFRTALDA-------EKAREKAIREGIELPKE---EPFDSNCITPGTEFMAKLS 110
Query: 172 IALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 227
L+Y+++ +++ D W+ ++LS VPGEGEHKIM Y+R + P YDPN R+
Sbjct: 111 QQLRYFVNKKVSEDTDWQGCDIVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNARN 166
>gi|356533625|ref|XP_003535362.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 351
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 98/127 (77%), Gaps = 15/127 (11%)
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
+DADLIML+LATHEVHFS+LRE DKCFLCGQ GH AA+C+ A +FD
Sbjct: 219 MDADLIMLSLATHEVHFSVLRE--------DKCFLCGQVGHFAADCQ------AEDFDTP 264
Query: 292 GDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHM 351
D+ + KK Y+FL+IW LREYL +E IPNPPFEID+E IVDDF+F+CFFVGNDFLPHM
Sbjct: 265 -DDSSIHKKKYEFLNIWVLREYLQFELEIPNPPFEIDIERIVDDFVFLCFFVGNDFLPHM 323
Query: 352 PTLEIRE 358
PTLEIRE
Sbjct: 324 PTLEIRE 330
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 85/111 (76%)
Query: 69 PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADS 128
PAP T+D+VF+ +FDYID L+ +VRPRKLLY+AIDGVAPRAKMNQQRSRRFR +KD A++
Sbjct: 121 PAPATYDDVFKSIFDYIDHLYSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRTAKDVAEA 180
Query: 129 AAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
AEEERLR++F EG+ L K + DSNVITPGT+FM I L H
Sbjct: 181 EAEEERLRKKFMSEGKVLSSKDKPETSDSNVITPGTQFMDADLIMLSLATH 231
>gi|402582600|gb|EJW76545.1| hypothetical protein WUBG_12547, partial [Wuchereria bancrofti]
Length = 123
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 93/111 (83%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL KYP VV D +EE+P ++G+++PV+T PNPN E+DNLYLDMNGIIH
Sbjct: 7 MGVPAFFRWLTRKYPSVVVDAVEEKPRDLNGIRVPVNTVDPNPNFQEFDNLYLDMNGIIH 66
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
PC HPEDRP P T +E+F +F+YIDRLF +VRPRKLLYMAIDGVAPRAK+
Sbjct: 67 PCTHPEDRPCPKTEEEMFMLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 117
>gi|90078106|dbj|BAE88733.1| unnamed protein product [Macaca fascicularis]
Length = 417
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 97/135 (71%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + + W++HYYY GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V
Sbjct: 51 YVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIHFELGKPFKPFEQLLAVL 110
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ +
Sbjct: 111 PAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAM 170
Query: 694 KKIEHTLTEEEARRN 708
+ H+L +EE +RN
Sbjct: 171 ETCNHSLKKEERKRN 185
>gi|428673024|gb|EKX73937.1| XRN 5'-3' exonuclease family protein [Babesia equi]
Length = 1049
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 211/441 (47%), Gaps = 63/441 (14%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHP 61
GVP Y W+ E + G++ P+ +S NG++Y Y+DMN +IH
Sbjct: 441 GVPRLYSWMIENFY---------------GMRKPLKSSDLE-NGVDY--FYVDMNALIHS 482
Query: 62 CFHPEDRPAPTTFDEV-FQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
H P T D+ + + + F +V+PRK++Y+A+DGV P AK+NQQR+RRFR
Sbjct: 483 ATHGNIYPVVTIEDQQRMKRITAALLNTFKLVKPRKVMYIAVDGVCPSAKINQQRTRRFR 542
Query: 121 ASK--DAADS--AAEEERLRQEFEREGRKLPPKS-----------DSQVFDSNVITPGTE 165
K D S EE+ +E E + L P++ D+ F+ N I+PGT+
Sbjct: 543 LCKVIDKVKSILEPEEDTESEEDSEEPKPLTPENYVLRKSKIDGYDNISFNPNYISPGTD 602
Query: 166 FMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNT 225
FM L ++ +I L+ + W V+ S NVPGEGEHKI +R L D T
Sbjct: 603 FMTRLDNEIKNWIALQTHLGT-WGDCYVVYSGTNVPGEGEHKIYDLIRKVTTL---DRKT 658
Query: 226 R---HCLYGLDADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAANCEGKA 281
R H +YGLDADL++L+L T ILRE TP K +P A G
Sbjct: 659 RLESHLVYGLDADLMILSLITKMSKMYILREEKDSTPHVLAKI----KPDPYYAKDTGLV 714
Query: 282 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLR--------EYLDYEFRIPNPPFEIDLEC-- 331
F K D + + ++ L + LR Y++ +F+ + F
Sbjct: 715 -----HFHSK-DYIGLKSDNFEVLSMRKLRAGMYNRCVNYVNTKFKPKDSAFLTKKGTPA 768
Query: 332 -IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 390
+ DDF + FF GNDFLPH+P +++++ + L+ Y G+LT G K RR+
Sbjct: 769 RLTDDFALLSFFAGNDFLPHLPNVDLKDSSFTDLINTYYSLLPKFNGFLTHGLKIHTRRL 828
Query: 391 EHFIQAVGSYEDRIFQKRARL 411
+ ++A+ E + F+ +A +
Sbjct: 829 QSLMKAISPNEAKYFKIKAEV 849
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
G+ + YYEEK ++R + + Y EGL W + YY+ G SW W Y YHYAP A
Sbjct: 860 GYAKFYYEEKCGIDYNDKR--AIRKMCEDYIEGLFWNLSYYHSGCPSWDWCYKYHYAPLA 917
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYR-----------KLMTDPN 653
SDL + +++F G+P P LL V P + + LP YR +L+++P
Sbjct: 918 SDLARVSSISVTFYKGNPITPLEHLLAVTPPSGNELLPPRYRFVIFHSACSLFRLLSEPK 977
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMAD 713
+ +++P DFE+ +GK + W+ KLPF++ +L KI ++ +E R ++
Sbjct: 978 GELCEYFPEDFEICQDGKEHEWEYTVKLPFLNTRKL----SKIARSVNDELEYR-TLYRF 1032
Query: 714 MLFVLLS 720
+L+ L S
Sbjct: 1033 VLYYLFS 1039
>gi|67583943|ref|XP_665025.1| CG10354-PA [Cryptosporidium hominis TU502]
gi|54655348|gb|EAL34795.1| CG10354-PA [Cryptosporidium hominis]
Length = 171
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 118/178 (66%), Gaps = 11/178 (6%)
Query: 1 MGVPAFYRWLAEKYPLVVA---DVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNG 57
MGVP FYRWL +YPL+V D I+EE + D +D ++PN NG E+D LYLDMNG
Sbjct: 1 MGVPTFYRWLCNRYPLIVKELKDAIDEETCLND-----LDLTEPNING-EFDCLYLDMNG 54
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IIHPC +P P E+F + DYIDRL+ MV+PR+L+YMAIDGVAPRAKMNQQRSR
Sbjct: 55 IIHPCCNPSGGDKPKDEAEMFTRVCDYIDRLYAMVKPRRLIYMAIDGVAPRAKMNQQRSR 114
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQ 175
R++ + + + E ++EF + G K P + +DSNVITPGT FM L++ L
Sbjct: 115 RYKTALEMDYNRRAYEIAQEEFYKIGYKCPEYVEK--WDSNVITPGTPFMERLTMCLH 170
>gi|349604424|gb|AEP99978.1| 5'-3' exoribonuclease 1-like protein, partial [Equus caballus]
Length = 514
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 98/135 (72%)
Query: 574 YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVF 633
Y + + W++HYYY GV SW W+YPYHYAPF SD++++ +I FELG PFKPF QLL V
Sbjct: 202 YVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISALSIHFELGKPFKPFEQLLAVL 261
Query: 634 PSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEV 693
P+AS + LP Y+ LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ +
Sbjct: 262 PAASKNLLPTCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAM 321
Query: 694 KKIEHTLTEEEARRN 708
+ H+L +EE +RN
Sbjct: 322 ETCNHSLKKEERKRN 336
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 315 DYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVY-KKE 371
DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L I A+ LL Y
Sbjct: 1 DYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYILPS 60
Query: 372 FRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
+ LGGY+ + +L R E ++ + ++ F +
Sbjct: 61 CQNLGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 96
>gi|312371116|gb|EFR19376.1| hypothetical protein AND_22597 [Anopheles darlingi]
Length = 374
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 109/191 (57%), Gaps = 14/191 (7%)
Query: 530 NSDNPEEDKVKLGE------------PGWKERYYEEKFNAKTPEEREETRKDVVLRYTEG 577
+ D EE ++ +G+ +K YY K + E+ R + Y
Sbjct: 4 SGDEDEESQISVGDIENDPVLFEKEFKSYKRNYYMTKMG--YADFNEDVRAEQAECYIRA 61
Query: 578 LCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSAS 637
L W +HYYY GV SW W+YP+HYAPF SD+ D + F++ PF PF QLL V P+AS
Sbjct: 62 LQWTLHYYYRGVVSWSWYYPHHYAPFISDVDHFDHLKLEFDMARPFLPFQQLLSVLPAAS 121
Query: 638 SHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 697
LP Y +LM DPNSP+ DFYP +F D+NGK+ SW+ + +PFIDE RLL +K +
Sbjct: 122 KSHLPAAYHQLMIDPNSPVYDFYPPEFSTDLNGKQQSWEAVVLIPFIDERRLLKAMKTCD 181
Query: 698 HTLTEEEARRN 708
LT+EE +RN
Sbjct: 182 EYLTDEEKQRN 192
>gi|323456482|gb|EGB12349.1| hypothetical protein AURANDRAFT_20690, partial [Aureococcus
anophagefferens]
Length = 186
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 121/170 (71%), Gaps = 1/170 (0%)
Query: 84 YIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREG 143
++DRL ++RP +Y A+DGVAPRAKMNQQR+RR+ A+++ A++AA E+ LR E G
Sbjct: 8 HLDRLMELMRPTAFVYFALDGVAPRAKMNQQRTRRYVAAQERAEAAAAEDALRDELAATG 67
Query: 144 RKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGE 203
+ P K ++ +D NVITPGTEFM L+ L+ Y R + P W+ I +LSDA VPGE
Sbjct: 68 QPAPEKKAAK-WDHNVITPGTEFMRKLADFLRAYCARRARSHPRWKHISFLLSDATVPGE 126
Query: 204 GEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
GEHKI+SYVR R GYDP T+HC+ G DADLIML+LA HE +F +LR+
Sbjct: 127 GEHKIISYVRALRQQEGYDPATQHCIVGEDADLIMLSLALHEENFLVLRK 176
>gi|123507009|ref|XP_001329319.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121912273|gb|EAY17096.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1017
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 167/372 (44%), Gaps = 79/372 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEY---DNLYLDMNG 57
MGV FYRWL ++YPL+ + N L Y +N Y+D N
Sbjct: 1 MGVAGFYRWLVQRYPLI----------------------RQRANRLSYPRINNFYIDFNC 38
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
II+ +F + Y+D L ++P LL++A+DG AP AK QQRSR
Sbjct: 39 IIYNSIRLVKPSLDGDNTVLFNEICRYVDLLVQTIKPESLLFIAVDGPAPLAKCAQQRSR 98
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
RF A++D D F + I+ GTEFM L L +
Sbjct: 99 RFVAARDHEDGT-------------------------FSTAAISVGTEFMEELHEHLLKF 133
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLI 237
I+ R+ NDP W + KVI S PGEGE+K +Y+R +D HC+Y DADL+
Sbjct: 134 INSRIENDPIWSQPKVIYSSHRTPGEGENKFFNYMREHMFTEEHDEFATHCIYSPDADLV 193
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
LAL T + ++RE G P AN GE D++ V
Sbjct: 194 FLALQTGLKNIYLMREWGSWMG----------PNEDVAN---------GEI----DKLRV 230
Query: 298 PKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
++ LH+ LR+Y EF E DL +++DF+ + F +GNDF+PH P ++I
Sbjct: 231 SPGDFELLHLPLLRDYFQKEFP------ESDLPRLINDFVAISFLIGNDFIPHFPEIDIH 284
Query: 358 EGAINLLMAVYK 369
G + ++ Y+
Sbjct: 285 NGDFDNILTAYR 296
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 510 NKEEFKAKLKELLRD-KSDAFNSDNPEEDK-VKLGEPGWKE---RYYEEKFNAKTPEERE 564
+KE A LK ++ + +S A S P + K K E KE Y + K+ + +E E
Sbjct: 314 DKENLLAFLKAVVANVRSKARPSGKPAKTKHAKSTELHTKEGARSYLKSKYKSGFNKEFE 373
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP-FASDLKDLDQFNISFELGHPF 623
E V+ + WV+ YY+EG + W + Y Y P + + + +FE G P
Sbjct: 374 EELCHSVI---DSFNWVLKYYFEGCPDYTWQFHYFYPPPLVLVAEYVLDYEPNFEQGRPP 430
Query: 624 KPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPF 683
PF QLL + P S+ LP LM P SP++++YP FE+D+NG++Y ++G+ +PF
Sbjct: 431 LPFEQLLSILPPKMSYLLPYPIASLMFSP-SPLAEYYPDKFEIDLNGRKYEYEGVTLIPF 489
Query: 684 IDEARLLDEVKKIEHTLTEEEARRN 708
+D ++ E ++ L+ +E +RN
Sbjct: 490 VDMEKIRTETSRVFGALSPKEKKRN 514
>gi|330804007|ref|XP_003289991.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
gi|325079889|gb|EGC33468.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
Length = 1065
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 158/309 (51%), Gaps = 40/309 (12%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+RWL E YP V+A+ ID + ++DNLY+DMNG+IH
Sbjct: 1 MGIPLFFRWLVENYPKVLANG------YIDKI--------------QFDNLYIDMNGVIH 40
Query: 61 PCFHPEDRPAPTTF-------DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
+ R +++ Q ++ +D++ + V P KLLY+ IDGV PRAK +
Sbjct: 41 NSIKVDKRGKYGLIYKDDIKDEDIKQSVYWRLDQMILSVNPSKLLYIGIDGVPPRAKAVE 100
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR RRF++ K++ + E + + + + + S+VFDSN I+P TEF+ ++
Sbjct: 101 QRRRRFKSVKESKANILTELKKSKPYVSDEE--LSEIQSKVFDSNSISPATEFIEKINQW 158
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRN--LPGYDPNTRHCLYG 231
++ Y P + ++LSD+ VPGEGEHKIM Y+R + + + HC YG
Sbjct: 159 IKEYCEKLSTERPS---LTIVLSDSTVPGEGEHKIMDYIRSNHSKLIATGEKQLTHCFYG 215
Query: 232 LDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEK 291
+DADLI L L TH +F ILR+ + +C C HL+ C+ K K
Sbjct: 216 MDADLIFLGLETHLPNFYILRDSLHLL----ECKTCDSKDHLSYECKSAYAIKKSLI--K 269
Query: 292 GDEVVVPKK 300
VVV K+
Sbjct: 270 KSTVVVLKQ 278
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 302 YQFLHIWTLREYLDYEFRIPNPPFE----IDLECIVDDFIFMCFFVGNDFLPHMPTLEIR 357
+ F+++ + R YL+Y + + N E +D ++D +C +GNDF+PH+P+ I
Sbjct: 603 FDFVNLDSFRLYLEY-YLLENIDQERREKVDFNRCINDITLLCTLLGNDFVPHLPSFLIS 661
Query: 358 EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 392
G++ L + YK + +T + SL V +
Sbjct: 662 FGSLELTLCWYKDWIQKSIETITKDNSQSLHYVTN 696
>gi|399218119|emb|CCF75006.1| unnamed protein product [Babesia microti strain RI]
Length = 759
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 201/429 (46%), Gaps = 65/429 (15%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHP 61
GVP Y W+ + P V + + G D LYLD+NGI HP
Sbjct: 36 GVPRLYGWIMDTVPFVTKTLASSKI------------------GKNIDCLYLDLNGIYHP 77
Query: 62 CFHPEDRPAPTTFD----EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
H P D + F+ +F I ++ +++P+KLLY+A DGV P AK+NQQR+R
Sbjct: 78 ATHGN---VPIQLDIGQSQRFKRIFTAISNIYSIIKPKKLLYLASDGVCPAAKINQQRTR 134
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPP----KSDSQVFDSNVITPGTEFMAVLSIA 173
R R+S ER ++ L ++ +Q F N+I+PGTEF+ L
Sbjct: 135 RNRSSIGNIQDQINPERFANIQKQLETVLSSCGDNRTSTQPFTPNMISPGTEFIVTLENE 194
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+ ++ L++ ++ + V+ S ++VPGEGEHKI ++ L +YGLD
Sbjct: 195 LRKWLFLKV-SEGFFGNCDVVFSGSDVPGEGEHKIFQSIKSASRLSS-------MVYGLD 246
Query: 234 ADLIMLALATHEVHFSILREVV-FTPGQQDKCFLCGQPGHLAA----NCEGKAKRKAGEF 288
ADL++LA T ILRE +TP H+AA N + F
Sbjct: 247 ADLMLLASLTQGNKCIILREKRGYTP-------------HVAARRKPNPYYNSTTGLVHF 293
Query: 289 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEID--------LECIVDDFIFMC 340
K D + + K+ ++ +++ + + Y + +I+ + + DF+F+
Sbjct: 294 -HKRDFLTLQKRHFELVNLKAVAMHF-YNRLVTKDKKKINYNGSEDDFVNSLTRDFVFLT 351
Query: 341 FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 400
F GNDFLP +P +++ + + + Y K F +GG++T+G S+ R + F++ ++
Sbjct: 352 FLAGNDFLPRVPAVDLADESFTPFILSYFKNFDQIGGFITNGDSYSISRFKKFLEFPSTF 411
Query: 401 EDRIFQKRA 409
E F+ R
Sbjct: 412 EQNWFRLRG 420
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+ + YY+ KF ++ E K +V Y GL W M YY W W Y +HYAP +
Sbjct: 433 YAKYYYKIKFGVDVTDQPEFI-KGLVNDYLTGLHWNMFYYNRSYSCWNWSYKHHYAPLLT 491
Query: 606 DL-KDLDQFNIS-FELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
D+ K +FN F+ G P LL V P ++ LPE R + ++ ++P+D
Sbjct: 492 DMCKYKYKFNKQMFKNGKPVSQLTHLLSVCPPEDNYLLPEQLRDI-----DELNQYFPSD 546
Query: 664 FEVDMNGKRYSWQGIAKLPFID 685
EVD +G W+ + K+PFID
Sbjct: 547 VEVDKDGYNNEWEYVVKMPFID 568
>gi|156086892|ref|XP_001610853.1| 5'-3' exonuclease [Babesia bovis T2Bo]
gi|154798106|gb|EDO07285.1| 5'-3' exonuclease, putative [Babesia bovis]
Length = 509
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 185/375 (49%), Gaps = 23/375 (6%)
Query: 49 DNLYLDMNGIIHPCFHPEDRPAPTTFDEV-FQCMFDYIDRLFVMVRPRKLLYMAIDGVAP 107
D+LY+DMN +IH H P +E + + I+ +F +VRPRK+LYMA+DGV P
Sbjct: 26 DHLYMDMNAVIHVATHGNISPVVQMANEQRLRRITSAIEMMFDIVRPRKMLYMAVDGVCP 85
Query: 108 RAKMNQQRSRRFRASKDAADSAAEEERLRQE--FEREGRKLP-PKSDSQVFDSNVITPGT 164
AK+NQQR RRF SK+ A + E + ++LP + D+ F+ N I+PGT
Sbjct: 86 TAKINQQRGRRFLTSKNVDPLADICSAVSAEDGYTYIAKRLPFDEYDNVSFNPNYISPGT 145
Query: 165 EFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPN 224
+FM ++ + ++ L+ + + K V + VPGEGEHKI +R +
Sbjct: 146 DFMKIVDSEISNWLALK-TEEGFFGKCMVTYNGVTVPGEGEHKIFQCIRKMNKVCKRSRK 204
Query: 225 TRHCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKR 283
H +YGLDADL+ML++A + +LR E + P K G+P + + +
Sbjct: 205 DVHLVYGLDADLMMLSMAVKMPNIKVLREERNYAPHVVSK--KKGEP-YFSTDTGIVHLH 261
Query: 284 KAGEFDEKGDEVVVP------KKPYQFLHIWTLREY---LDYEFRIPNPPFEIDLECIVD 334
K D K V K+ Y+ + +R+Y P P+ I D
Sbjct: 262 KWDFIDLKKTHFEVASLHSLRKRMYERCWGYIMRKYGPSSSSFLNRPEAPYR-----ITD 316
Query: 335 DFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI 394
DF+ + F GNDFLP +PT+++ + ++ Y G+LTDGSK + R++
Sbjct: 317 DFVLLSFLAGNDFLPRLPTVDLANDSFKQMLVTYYGLMHKWQGFLTDGSKIHVPRLQTLF 376
Query: 395 QAVGSYEDRIFQKRA 409
+++ +E F+++
Sbjct: 377 KSLAKHEMEWFKEKG 391
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 30/47 (63%)
Query: 649 MTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKK 695
++ + ++PT+FE++ +G+ + W+ + KLPF++ +L+ +K
Sbjct: 451 LSASTGELRQYFPTEFEINEDGRIHEWEHVVKLPFVNTQKLVKAAQK 497
>gi|195164006|ref|XP_002022840.1| GL14782 [Drosophila persimilis]
gi|194104863|gb|EDW26906.1| GL14782 [Drosophila persimilis]
Length = 1039
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 125/216 (57%), Gaps = 12/216 (5%)
Query: 502 SFETDPQE--NKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGE-----PGWKERYYEEK 554
+F+ D E + +++ + LK L+ D + +N D+ E+ + +K YY K
Sbjct: 195 AFDIDVGEISSSKDYDSDLKALIDDSTQLYNDDSDEDLSDEEAGVLKDFQNYKRNYYRNK 254
Query: 555 FN--AKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQ 612
FN ++ P + E ++ Y L W++ YYY GV SW W+YP+HYAPF SDL ++
Sbjct: 255 FNLSSRPPNQLIE---ELGHHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDLNNIAT 311
Query: 613 FNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
I F+LG PF PF QLLGV P+AS LP Y LM P SP+++FYPTDF+ D+NGK+
Sbjct: 312 VQIKFQLGTPFLPFEQLLGVLPAASFKLLPTAYHDLMLKPTSPLAEFYPTDFKSDLNGKK 371
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
W+ + +PFIDE LL ++ E L+ E RN
Sbjct: 372 NDWEAVVLIPFIDECLLLSVMRACEAHLSTAERARN 407
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 85/124 (68%), Gaps = 21/124 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+R+++E+YP ++++ E IP E+DNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-CLSELAREH-------SIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D +E +FQ +F+Y+D+LF +++P+KL ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEQQIFQDIFNYVDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRAS 122
FR++
Sbjct: 102 FRSA 105
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 338 FMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAV 397
M F VGNDF+PH+P L I A+ LL Y + + +LGG + + K +L+R++ F+ A+
Sbjct: 112 LMGFMVGNDFIPHLPCLHISSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTAL 171
Query: 398 GSYEDRIFQKRA 409
E +++ A
Sbjct: 172 SEVELEQYKEHA 183
>gi|223993125|ref|XP_002286246.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977561|gb|EED95887.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 119/193 (61%), Gaps = 26/193 (13%)
Query: 78 FQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLR 136
FQ + Y+DR+ +V+P++L+++AIDGVAPRAK+NQQRSRR+R+ +
Sbjct: 1 FQNVCYYLDRIVSDIVQPKQLVFLAIDGVAPRAKLNQQRSRRYRSGSE------------ 48
Query: 137 QEFEREGRKLPPKS------------DSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNN 184
+E E L P S ++ F SN ITPGT F+ S + +I +L
Sbjct: 49 KEIEMHLMTLQPISINSDESAELSQDENHGFHSNCITPGTPFLYKCSQRILEFIRHKLQT 108
Query: 185 DPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATH 244
DP W + +I S +VPGEGEHKIM ++R ++N PGYDPN RHC+YG D DL+ML LATH
Sbjct: 109 DPKWHDLTIIFSGHDVPGEGEHKIMDFMRHEKNKPGYDPNLRHCIYGQDGDLVMLGLATH 168
Query: 245 EVHFSILR-EVVF 256
E H +LR EVVF
Sbjct: 169 EPHLCLLREEVVF 181
>gi|403221200|dbj|BAM39333.1| 5'-3' exoribonuclease 1 [Theileria orientalis strain Shintoku]
Length = 642
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 208/438 (47%), Gaps = 57/438 (13%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHP 61
GVP Y W+ E + ++IP+ S + D Y+DMN +IH
Sbjct: 88 GVPRLYGWMMENF---------------SKMRIPLQDSDIYG---KVDYFYVDMNAVIHA 129
Query: 62 CFHPEDRPAPTTFDEV-FQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
H P+ D+ + + + ++F +V+P+K++Y+ +DGV P AK+NQQR+RRFR
Sbjct: 130 ATHGNVSPSLMMEDQQRMRRIVTALLKIFKLVKPKKMMYIGVDGVCPSAKINQQRTRRFR 189
Query: 121 ASKDAADSAAEEERLRQE--FEREGRKLPPKS-DSQVFDSNVITPGTEFMAVLSIALQYY 177
K + +E +E +KLP +S D+ FD + I+PGTEFM+++ L+ +
Sbjct: 190 LYKSTTKPGFKPYYKSEEGKYEYTVKKLPIQSYDNVSFDPSYISPGTEFMSMMDSELRNW 249
Query: 178 IHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR---HCLYGLDA 234
I L+ + WE ++ S +VPGEGEHKI + R + DP + H +YGLDA
Sbjct: 250 IALQ-TYEGTWEDRYIVYSGTDVPGEGEHKIYDAI---RRMAECDPKVKQENHLVYGLDA 305
Query: 235 DLIMLALATHEVHFSILREVV-FTPGQQDKC----FLCGQPGHLAANCEGKAKRKAGEFD 289
DL+ML+L T + ILRE P + K + + G L + K +++
Sbjct: 306 DLMMLSLITKMPNMYILREKYDHAPHKLAKIKPNPYYSKETGLLHFHGMDYIDFKISDYE 365
Query: 290 EKGDEVV--------------VPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDD 335
+ V +FL R L +F + + +D C +
Sbjct: 366 VLSMRFLRRIMYSRCIRTSEAVSNDANKFLFNQNSRNRLTDDFSLLS-FLAVDKLCTTN- 423
Query: 336 FIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQ 395
VGNDFLPH+PT+E+ + N L+ Y K G+LT+ K ++ R++ ++
Sbjct: 424 -------VGNDFLPHLPTVELCNSSFNDLVNTYYKMLPKFRGFLTESYKINMSRLQQLMK 476
Query: 396 AVGSYEDRIFQKRARLHQ 413
+ E + F++++ L +
Sbjct: 477 ELSKLEIKYFKQKSTLEK 494
>gi|84998436|ref|XP_953939.1| 5'-3' exoribonuclease (XRN2, DHM1 ) [Theileria annulata]
gi|65304937|emb|CAI73262.1| 5'-3' exoribonuclease (XRN2, DHM1 homologue), putative [Theileria
annulata]
Length = 619
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 211/420 (50%), Gaps = 39/420 (9%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHP 61
GVP Y W+ E + V+IP+D S+ + G++Y Y+DMN +IH
Sbjct: 79 GVPRLYGWMMENF---------------SRVRIPLDDSEIS-KGVDY--FYVDMNAVIHS 120
Query: 62 CFHPEDRPAPTTFDEVFQCMFDYIDRL---FVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
H P D+ Q M + L F +V+P+K++Y+ +DGV P AK+NQQR+RR
Sbjct: 121 ATHGNIFPILMMEDQ--QRMRRIVAALLNTFNLVKPKKMMYIGVDGVCPSAKINQQRTRR 178
Query: 119 FR--ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
FR S ++ + + E + +++ K+ D+ F+ + I+PGT+FM+++ ++
Sbjct: 179 FRLYKSSNSDNEYYKVEDGKMKYKVNKLKIGA-YDNVSFNPSYISPGTQFMSMMDSEIRN 237
Query: 177 YIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADL 236
+I L+ N + W ++ + +VPGEGEHKI +R L N+ H +YGLDADL
Sbjct: 238 WIALQ-NYEGTWNDCYIVYNGTDVPGEGEHKIYDTIRKMLELDPDVRNSTHLVYGLDADL 296
Query: 237 IMLALATHEVHFSILR-EVVFTPGQQDK----CFLCGQPGHLAANCEGKAKRKAGEFDEK 291
+ML+L T ILR E +TP K + + G L + + K+ ++
Sbjct: 297 VMLSLITKLPKMYILREEYSYTPHILSKEKPDPYYSKKTGLLHIHGKDFIDLKSNNYEVL 356
Query: 292 GDEVVVPKKPYQFLHI-WTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG-NDFLP 349
++ + + I +++ L+ IPN + DDF + F G NDFLP
Sbjct: 357 SMNLLRKTMYSRCMSISGSVKNDLNRFLFIPNAKNR-----LTDDFSLLSFMAGRNDFLP 411
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P++E+ + N L+ +Y K L G+LT K ++ R++ ++ + E F+ ++
Sbjct: 412 HLPSVELCNSSFNDLINMYYKMLPKLRGFLTLNYKINMSRLQLLMKELCKKEFDYFKMKS 471
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 584 YYYEGVCSWQW---------FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFP 634
YYYE C + Y YHYAP SDL + I F G P P LL + P
Sbjct: 488 YYYENKCDIDFNNKKAIRKMCYKYHYAPLVSDLAKISGTTIKFYKGEPITPLEHLLAITP 547
Query: 635 SASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVK 694
+S LP YR L + P+ + ++P DFE+ +GK W+ + KLPF+D L +
Sbjct: 548 PNNSQLLPPVYRSL-SGPDGSLCQYFPEDFEICQDGKDNEWEHVVKLPFLDTKHLCQVAR 606
Query: 695 KIEHTL 700
+ L
Sbjct: 607 SVNDEL 612
>gi|413921161|gb|AFW61093.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 480
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 93/122 (76%)
Query: 668 MNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
MNGKR+SWQGIAKLPFI+E RLL E+KK+E TLT EEARRNS M +MLFV +H LS I
Sbjct: 1 MNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYI 60
Query: 728 YTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVASMEDIMGNQ 787
Y+L+ L K+R +KE+L+P S GMNGYI+ C GDP PPVFRSPV +EDIM NQ
Sbjct: 61 YSLNSKFGHLPDKDRGAIKEKLDPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQ 120
Query: 788 VL 789
V+
Sbjct: 121 VI 122
>gi|118373913|ref|XP_001020149.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89301916|gb|EAR99904.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 874
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 203/826 (24%), Positives = 329/826 (39%), Gaps = 183/826 (22%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP ++ W+ KYP V V + N D LY+D+NGI +
Sbjct: 1 MGVPGYFSWIHRKYPYQVRKV------------------RRNGRKKHIDCLYIDVNGICY 42
Query: 61 PCFHPEDR----PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI-------------- 102
E + P + + +F+ + D+ID + +V P+ +Y+ +
Sbjct: 43 QYARDEHQYNYLLKPKSLETIFKQVIDHIDSIIELVEPQLQVYLMLANPFQPNLSGFESY 102
Query: 103 ----------------------------DGVAPRAKMNQQRSRRFRASKDAADSAAEEER 134
DG PRAKMNQQR RRF A
Sbjct: 103 FCMMRFKKNQFQLKLFAIFYIQKIILKKDGPCPRAKMNQQRQRRFHAE-------MHHLT 155
Query: 135 LRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL------------ 182
L+ E ++ G + + +N I PGT FM L+ L+ YI R+
Sbjct: 156 LKDELKKHGFDVK----EETVPNNSIAPGTPFMYELNEQLRRYIETRIALSNKAMTDGEA 211
Query: 183 ---NNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
+ ++K++ ILSD+N PGEGEHKI+ HC+ G DADL++L
Sbjct: 212 DHKEHQVSYKKLQFILSDSNAPGEGEHKILELT--------------HCIVGADADLLLL 257
Query: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAA-----NCEGKAKRKAGEFDEKGDE 294
+LAT ILRE G DK L + L + +R+ D G +
Sbjct: 258 SLATIGKRILILRENSKFKG--DKTDLEKELQKLKEELSHPQLDLHKEREYDLVDINGLK 315
Query: 295 VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
V+ K Y+ + + L Y NP ++DDF+F+ F GNDFLP +
Sbjct: 316 RVILDK-YKKMFDNKQVQNLKY-----NPM------SLMDDFVFLSLFAGNDFLPRQNYM 363
Query: 355 EIRE------GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE-----DR 403
+I+ ++ L+ Y YL+D ++ F + V + E +R
Sbjct: 364 QIKSEKGHKPNILDKLIEKYDSYLETATSYLSDRGFIKYNQIIEFFKQVATIEPKFKNNR 423
Query: 404 IFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQ 463
IF+ + + + +K ++ ++VE + D L+ F L + S ++
Sbjct: 424 IFEAPQKEEKSVFDYVKI--MSQKQINNVEDIKDQD-LIDYD-FKEEDLKLQQTSSVNEE 479
Query: 464 SEC------VGRLDNGKGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQ--ENKEEFK 515
+E + D + + H N + D Q E+ +
Sbjct: 480 TEIPKDIIPISDSDEDQEEQKQSHDKEYHKKNKKEQKK---HHNQHDKDNQLASGTEDEQ 536
Query: 516 AKLKELLRDKSDAFNSDNPEED---KVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVL 572
K K+ N ++ EED K+ E KE Y +EK +E + +++
Sbjct: 537 KKQKQ---------NQEDDEEDEIQKILSDEMNGKEIYLKEKLKVTNQQEYDL----IIM 583
Query: 573 RYTEGLCWVMHYYYEGV--CSWQWFYPYHYAPFASDLKDLDQFNISFEL----GHPFKPF 626
+Y EG + + YY+ G+ SW +FYP++YAP D+ + + N FE+ PF+P+
Sbjct: 584 KYLEGFEFTLLYYFRGIEKASWNYFYPHYYAPLTQDVVEFLERNPKFEVKFVKTQPFQPY 643
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
QLL + + LP ++ L P F P ++D G I KLPFID
Sbjct: 644 KQLLAILHPDNEALLPAEFKGLFKKYLQP---FCPQILDIDKYGATMEHMQIIKLPFID- 699
Query: 687 ARLLDEV-----KKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
+L++ K +E + E + RN D +F + L++SI
Sbjct: 700 VNVLEQAYQEGEKALEKSKNEYDKNRNIRSQDFIF---EYDLNSSI 742
>gi|343424057|emb|CCD17964.1| 5'-3' exonuclease, putative [Trypanosoma vivax Y486]
Length = 996
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 170/362 (46%), Gaps = 89/362 (24%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL KYP VV++ P + G LY+D+NG+IH
Sbjct: 1 MGVPKFASWLRNKYPDVVSN---NCPTSVHG-------------------LYVDLNGLIH 38
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E+ P+ E +C+ ++ L VRP+++LY+A+DGVAPRAKMNQQR+RR
Sbjct: 39 PCCHSENDPSIALLPEGEKLECICYEVELLVETVRPQEVLYIAVDGVAPRAKMNQQRARR 98
Query: 119 F--------------RASKDAADSAAE-EERLRQEFERE--------------------- 142
+ RAS + A+ E + +EF +
Sbjct: 99 YMSRAVPARADKSPSRASHAKNNRCADVVEEVVREFTSDEIAEANNDLNEVRNLLLQDSL 158
Query: 143 -GRKLP------------PKSDSQV-------FDSNVITPGTEFMAVLSIALQYYIHLRL 182
G+ +P P+SD+ FDSN I+PGT FM+ ++ + + +
Sbjct: 159 YGQPVPDASVGGNTTVFVPRSDTSTADISAVEFDSNCISPGTAFMSKVADKVLAMLQRNM 218
Query: 183 -NNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLAL 241
++D W ++ VI SD+ PGEGE KI+ ++R Q + PG++ H + GLDADLI LAL
Sbjct: 219 TSDDSKWSRLCVIFSDSRTPGEGEQKIIDFLRTQSSYPGFNGRGSHVIVGLDADLIFLAL 278
Query: 242 ATHEVHFSILREVVFTP------GQQDKCFLCGQPG--HLAANCEGKAKRKAGEFDEKGD 293
+ H +ILR+ P QQ + G+ H + A + D+ GD
Sbjct: 279 SLHIPGVTILRDTTRNPHKRRAAAQQQRGPRSGKQKKYHFPDDARVMALNRDSSDDDTGD 338
Query: 294 EV 295
EV
Sbjct: 339 EV 340
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 67/171 (39%), Gaps = 19/171 (11%)
Query: 545 GWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYE--GVCSWQWFYPYHYAP 602
GW+ Y ++ E E Y GL +V YY G C W W+YP+H+ P
Sbjct: 587 GWRNAYLSTTGLSERVHEACEA-------YVNGLRFVWRYYTSSSGTC-WSWYYPFHHGP 638
Query: 603 FASDLKDLDQFN-------ISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD--PN 653
A D+ Q +S P Q+L VFP S LP M + +
Sbjct: 639 LALDMAAYLQSCDVGRLPPVSNPATEPPNTLLQMLCVFPPTSHALLPAILGSAMLEKYKS 698
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE 704
+S +P + VD + IA +PF D L V E LTEEE
Sbjct: 699 QQLSSSFPKSWSVDYHDSNEKHLAIAMIPFADVRELQPLVDAAEPHLTEEE 749
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 391
++DD I + +GNDF+PH+P+ E A++ + +Y + G D + SL ++
Sbjct: 468 VIDDIILIAMLMGNDFIPHLPSAFCGESALDNFLELYVTDVLPYGFLTIDSYEISLPQLR 527
Query: 392 HFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRG 429
+++ E +F +R +L + ++RE+A G
Sbjct: 528 RLLESYAKIEAVLF-RRHKLLADADQNVRREEAGTGTG 564
>gi|154317858|ref|XP_001558248.1| hypothetical protein BC1G_02912 [Botryotinia fuckeliana B05.10]
Length = 185
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 127/203 (62%), Gaps = 31/203 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP + + E +IP E+D LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPSISQLIAEN--------RIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C H + A T +++F +F+YI+ L+ ++P++L YMA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFYMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR + D E R++ +EG+++ PK D+ FDSN ITPGTEFM L++ L+Y+I
Sbjct: 102 FRTALDV-------ENAREKAIKEGKEM-PKEDA--FDSNSITPGTEFMQKLTLQLKYFI 151
Query: 179 HLRLNNDPGWEKIKVILSDANVP 201
+++ D W+ +++LS VP
Sbjct: 152 AKKISEDVDWQGTEIVLSGHEVP 174
>gi|328719013|ref|XP_001945621.2| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Acyrthosiphon
pisum]
Length = 1358
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 102/165 (61%), Gaps = 6/165 (3%)
Query: 547 KERYYEEK--FNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA 604
KE YY+ K +N T ++ + Y L W ++YYY G CSW W+YP+HYAP+
Sbjct: 99 KENYYKNKLDYNVIT----DDVMRSQAEGYIRALQWNLNYYYNGCCSWAWYYPHHYAPYI 154
Query: 605 SDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDF 664
SD+K + I F+LG PF P+ QLL V PS S LP+ ++ LMT+ SPI +YP F
Sbjct: 155 SDIKGFENLKIDFDLGQPFLPYEQLLAVLPSLSKELLPKPFQDLMTEEASPIRLYYPEKF 214
Query: 665 EVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
E D+NGK++ W+ + +PFIDE L+ +K +EH LT +E RN+
Sbjct: 215 ETDLNGKQHEWEAVVLIPFIDEETLIKSMKMVEHKLTADEKNRNT 259
>gi|159474632|ref|XP_001695429.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
gi|158275912|gb|EDP01687.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
Length = 171
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 119/200 (59%), Gaps = 30/200 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P FYRWL+E+YPL+ K+ + P E DNLYLDMNGIIH
Sbjct: 1 MGIPKFYRWLSERYPLL-------------NQKLTLTEGPP-----EMDNLYLDMNGIIH 42
Query: 61 PCFHPEDRP-APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H + T +++ +FDY+D+L +VRP+KLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 43 NCTHANRKDIGGVTEEDMMLKVFDYLDKLVQIVRPQKLLFMAIDGVAPRAKMNQQRSRRF 102
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+ SA E + +E R+G +P FDSN ITPGTEFMA L L+++I
Sbjct: 103 K-------SAMERLKNEEEQRRKGEVVP----DDAFDSNCITPGTEFMARLGKHLRFFIR 151
Query: 180 LRLNNDPGWEKIKVILSDAN 199
++ DP W+K V+ S N
Sbjct: 152 RKMAEDPLWQKPNVVFSGRN 171
>gi|330837844|ref|XP_003292059.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
gi|325077732|gb|EGC31426.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
Length = 126
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 97/125 (77%), Gaps = 3/125 (2%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+PAF+RWL +KY ++ + E P DG + VD ++ NPNG EYDNLYLDMNGIIH
Sbjct: 1 MGIPAFFRWLIDKYGGLIQETTE--PREGDGSRSKVDFTEMNPNG-EYDNLYLDMNGIIH 57
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P + D++ Q +++Y+D LF ++RPRKL+YMA+DGVAPRAKMNQQR+RRFR
Sbjct: 58 PCAHPEKGPKPQSVDDMIQSIYEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRFR 117
Query: 121 ASKDA 125
A+ D+
Sbjct: 118 AALDS 122
>gi|260944868|ref|XP_002616732.1| hypothetical protein CLUG_03973 [Clavispora lusitaniae ATCC 42720]
gi|238850381|gb|EEQ39845.1| hypothetical protein CLUG_03973 [Clavispora lusitaniae ATCC 42720]
Length = 373
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 154/340 (45%), Gaps = 52/340 (15%)
Query: 329 LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLR 388
LE +DD++FMCFFVGNDFLPH P+L +R+ I++L+ +K+ L Y+T K +
Sbjct: 38 LERAIDDWVFMCFFVGNDFLPHFPSLSVRDNGIDILVGCWKQVIPRLRDYITCDGKLNYE 97
Query: 389 RVEHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPVSRFH 448
VE + + + ED I +KR +R+A KR K G E + L VS+
Sbjct: 98 GVEQLLAVLATKEDEILRKRHESERRYANNEKRRKV----GQAEEKAMRAQFLPNVSKGR 153
Query: 449 GSRLASGPSPSPYQQS-----ECVGRLDNGKGTSGRPHKVPRLSSGATIGAAI---VEAE 500
+ P + E +L N R + AA+ +EA+
Sbjct: 154 ERAPVHADTNMPLMDTSGNLVEGYAQLSNKDIVHNRDVITKANMANEDAAAALRKLLEAK 213
Query: 501 NSFETDPQENKEEFKAK----------------------------LKELLRDKSDAFNSD 532
S T E + K ++ L + SD+
Sbjct: 214 ASGATGKSEETSDVSIKNEEESEFESQEPIDSIKGEDVDSVKSESMESLKTESSDSIKQA 273
Query: 533 NPEE--------DKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHY 584
+ E D V+ E G+++RYYE KF A +PEE + RK VV Y EG+ WV+ Y
Sbjct: 274 DSAEPPSRKRALDDVRYLEAGYRDRYYEAKFGASSPEEVADIRKKVVRAYLEGISWVLLY 333
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDLDQF----NISFELG 620
YY+G SWQW++PYHYAPFA+D +L + I F+ G
Sbjct: 334 YYQGCPSWQWYFPYHYAPFAADFTNLREIVGEEGIKFDFG 373
>gi|290992975|ref|XP_002679109.1| 5'-3' exoribonuclease [Naegleria gruberi]
gi|284092724|gb|EFC46365.1| 5'-3' exoribonuclease [Naegleria gruberi]
Length = 1047
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 205/463 (44%), Gaps = 81/463 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGL---EYDNLYLDMNG 57
MGVP F WL V D +++ D + P++ + DN Y+D+NG
Sbjct: 1 MGVPGFIYWLVTN----VIDTNDKKDAADDKIVYPINKQSILVQDILKQRVDNFYIDLNG 56
Query: 58 IIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
+IHPC HP+ P D++ + + + +L V+P L Y+A+DGVAP AK QQR R
Sbjct: 57 LIHPCCHPQTGKKPENEDDMMKRITAELLQLARTVQPNNLFYIAVDGVAPAAKQEQQRHR 116
Query: 118 RFRASKDAADSAAEEERLRQEFEREGRKLPPK-SDSQV---------------------- 154
RF A + R++ E +E +L + +S+V
Sbjct: 117 RFVAISENEQKLKFIGRIQSEITKEKDELTKEIKESEVDKIQQREKLLDSAIARMEAKKN 176
Query: 155 -FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVR 213
+D NVI+PGT FM + L P IKVI+SD++VPGEGEHKI+SY++
Sbjct: 177 HWDHNVISPGTPFMMKCMSTVHQAAKLIATEFP---HIKVIVSDSSVPGEGEHKILSYMK 233
Query: 214 LQRNLPGYD-PNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGH 272
++ + + H ++GLDADLIML ++ P K F +
Sbjct: 234 REKAINSKEFSEMLHVVHGLDADLIMLT------------SLIGLP----KIFSYRDSEN 277
Query: 273 LAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECI 332
+ N K E V+ L + + +D+ N F
Sbjct: 278 VRMNKRDKELFNISELGRHFARVIYS--SIAELDTSSKSQNIDW----SNANF------- 324
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK------EFRALGG-------YL 379
V D + + FVGNDFLP++P+L + A +++M Y K E LG YL
Sbjct: 325 VSDVVLLLMFVGNDFLPNVPSLVMHNHAASIIMYSYAKYLLQCMEESGLGDNFDPRPHYL 384
Query: 380 TDGSKPSLRRVEHFIQAVGSY-EDRIFQKRARLHQ---RHAER 418
D + S+ +++ I+A+ S E+ + A+L+ RH +R
Sbjct: 385 VDYTNSSMINIKNMIKAMQSIREESVIGMFAKLYHSTIRHYQR 427
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 567 RKDVVLRYTEGLCWVMHYY-YEGVCSWQWFYPYHYAPFASDLKDL-DQFN-------ISF 617
RK +V Y G+ W +YY Y SW W YP HYAP D+ D D+ N +F
Sbjct: 544 RKTLVKEYLRGIVWAFNYYSYNDPPSWYWRYPEHYAPVMCDILDCYDEINDEYIKDITTF 603
Query: 618 ELGHPFKPFNQLLGVFPSASSHA-LPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
E G P + QL+ + P S A LP+ Y ++ +P + F+P +FE D N ++
Sbjct: 604 EKGEPLTAYQQLISILPKESMEACLPKTYTDILNNPK--LDKFFPKEFEKDGNFSGIVYK 661
Query: 677 GIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQ 736
++ LP ID + + K+I+ L+EEE+R+N D+++ + ++ + TL++ ++
Sbjct: 662 AVSLLPSIDLDLVKNITKEIDPLLSEEESRKNKFGIDVIYTAVDSEVNKKLSTLEDKVEK 721
>gi|123428648|ref|XP_001307542.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121889177|gb|EAX94612.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 498
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 183/396 (46%), Gaps = 90/396 (22%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP + +W+ + ++D ++K +P YDNLY+DMN II+
Sbjct: 1 MGVPGYLQWILTR----ISDTQFHH------------SAKSSP----YDNLYIDMNSIIY 40
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ + ++ + ID L M RP+K++ +A+DG P AK++QQRSRR+
Sbjct: 41 YAINKINFKDRLPNQDLVNEIVIKIDELVKMARPKKIILIAVDGCPPTAKISQQRSRRYA 100
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
S + DS+ FD + + PGTEFM L+ L+ +
Sbjct: 101 YSANYQDSS-------------------------FDLSNVFPGTEFMINLNKLLESQLLN 135
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
++ ND W K K+ SD PGEGEHKI+ ++R N P Y + +Y +D D+I LA
Sbjct: 136 KITNDEIWSKAKLYYSDVFCPGEGEHKIVDFIRSISNDPEYSHSEWSYIYTVDTDVIFLA 195
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L+ H ++S+ +F P + G +
Sbjct: 196 LSIHNPNYSL----IFEP-------------------------------QNGSQ------ 214
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
Y +HI ++REY+ +F P + D E I+DD++F+ F NDF LE +
Sbjct: 215 -YTVIHIDSIREYIFQQFE---PYCKPDFERIIDDYVFLSFLFKNDFFAGFKELEFCTQS 270
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQA 396
+ ++ Y+ +ALGG++ +G+ ++ ++ FI++
Sbjct: 271 KDTIITNYRAARKALGGFIVNGNDINIELLKKFIES 306
>gi|449019218|dbj|BAM82620.1| deoxyribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1527
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
+K RYY EK + R+ + Y E + W + YY GV SW+WFYPYHYAPF S
Sbjct: 502 YKRRYYHEKLGIDYDHDAAAVRR-ICRSYLEAIVWTLEYYLNGVASWRWFYPYHYAPFCS 560
Query: 606 DLKDLDQF--NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTD 663
D+ L I E G PF P QLL V P S+ LP Y KLMTD +SP++D YP+
Sbjct: 561 DMVGLQALAQEIRLEQGTPFLPLQQLLAVLPPRSAWCLPPAYAKLMTDTSSPLADLYPSQ 620
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI-EHTLTEEEARRNSIMADMLF 716
+DM GKR W+GI LPF+DE RL + + LT E RN + + +L
Sbjct: 621 VAIDMQGKRNEWEGIVLLPFMDENRLFAALASVPPDALTPTEQERNHLGSCILL 674
>gi|71033443|ref|XP_766363.1| 5'-3' exonuclease [Theileria parva strain Muguga]
gi|68353320|gb|EAN34080.1| 5'-3' exonuclease, putative [Theileria parva]
Length = 534
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 59/368 (16%)
Query: 49 DNLYLDMNGIIHPCFHPEDRPAPTTFDE-----VFQCMFDYIDRLFVMVRPRKLLYMAID 103
D Y+DMN +IH H P D+ + M + F +V P+K++Y+ +D
Sbjct: 66 DYFYVDMNAVIHSATHGNLFPVLMMEDQQRMRRIVTAMLN----TFKLVNPKKMMYIGVD 121
Query: 104 GVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKS-DSQVFDSNVITP 162
GV P AK+NQQR+RRFR K ++ + E + + KL + D+ F+ + I+P
Sbjct: 122 GVCPSAKINQQRTRRFRLYKSSSSDNEYYKGENGEMKYKVNKLKVGAYDNVTFNPSYISP 181
Query: 163 GTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYD 222
GT+FM+++ ++ +I L+ N + W ++ S +VPGEGEHKI +R L
Sbjct: 182 GTQFMSMMDSEIRNWIALQ-NYEGTWNDCYIVYSGTDVPGEGEHKIYDTIRKMVELDDNV 240
Query: 223 PNTRHCLYGLDADLIMLALATHEVHFSILREV-VFTPGQQDKCFLCGQPGHLAANCEGKA 281
+ H +YGLDADL+ML+L T ILRE FTP H+ +
Sbjct: 241 KKSTHLVYGLDADLVMLSLITKLPKMYILREEHNFTP-------------HILS-----K 282
Query: 282 KRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCF 341
++ F ++ D V K Y+ W DF + F
Sbjct: 283 EKPNPYFSKETDHVF---KVYE--SFWNY------------------------DFSLLSF 313
Query: 342 FVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYE 401
GNDFLPH+PT+E+ + N L+ +Y K L G+LT K + R++ ++ + E
Sbjct: 314 MAGNDFLPHLPTVELCNSSFNDLINMYYKMLPKLRGFLTQTYKINTSRLQLLMKELCKNE 373
Query: 402 DRIFQKRA 409
F+ +A
Sbjct: 374 FEYFKMKA 381
>gi|258597213|ref|XP_001347750.2| exonuclease, putative [Plasmodium falciparum 3D7]
gi|254832599|gb|AAN35663.2| exonuclease, putative [Plasmodium falciparum 3D7]
Length = 734
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 129/260 (49%), Gaps = 55/260 (21%)
Query: 2 GVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHP 61
G+P Y+WL YP V ++I E + VD Y+DMNG+IH
Sbjct: 46 GIPRMYKWLTSYYPTVREELINNEK------QKSVDI------------FYIDMNGVIHH 87
Query: 62 CFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H P +DE +F + Y+ LF +++P+KL+Y+ +DGV+P+AKMNQQR RRF
Sbjct: 88 CTHANKEKLPI-YDEHELFSNILQYLKNLFYLIKPKKLIYIGVDGVSPKAKMNQQRKRRF 146
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
+ D+ + S +F+ N IT GT+FM Y I+
Sbjct: 147 LSIFKINDN--------------------DNTSNLFNPNCITTGTDFM--------YKIN 178
Query: 180 LRLNNDPGWE------KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L LN + VI S ++V GEGEHKI+ Y+R N HC+YGLD
Sbjct: 179 LSLNKWFKILKKKKVFEFDVIFSGSDVAGEGEHKILKYIRENCKRDSNFKNYNHCIYGLD 238
Query: 234 ADLIMLALATHEVHFSILRE 253
ADLIML+L TH + ILR+
Sbjct: 239 ADLIMLSLVTHLNNIFILRD 258
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 6/132 (4%)
Query: 554 KFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQF 613
KF + P+E + ++V +Y EGL W +HYY+ G SW W YPYHYAP SDL ++
Sbjct: 576 KFGLEDPKEIQ----NIVKKYIEGLFWNLHYYHFGCASWYWEYPYHYAPLCSDLLSFEKS 631
Query: 614 NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRY 673
+ FE G P+ F L+ V P + LP+ Y+ + + + F+P + ++D NGK+
Sbjct: 632 DFFFEKGKPYSAFTHLISVLPQKDKNLLPDAYKNIYVE--DEVKSFFPENVKIDPNGKKE 689
Query: 674 SWQGIAKLPFID 685
+W+ I LPFI+
Sbjct: 690 TWEYIVHLPFIN 701
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 391
+VDD +F+ F VGNDFLPH+P ++I EG++N ++ Y Y+T K + R++
Sbjct: 477 VVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNSYIFYIYKYSNYITYKDKVHIERLK 536
Query: 392 HFIQAVGSYEDRIFQKRA 409
++ + + E F+KR
Sbjct: 537 IILKILSAQEFEYFKKRG 554
>gi|385303536|gb|EIF47602.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 174
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 30/193 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E++PL +V DG ++ +E+DN+YLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLTSQEV--------DGQEM-----------IEFDNMYLDMNSILH 41
Query: 61 PCFHPEDRPAPTTFDE-VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C H D +E +F +F YID LF +++P+K+ YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 NCTHTNDGTIIHLSEEQMFGAIFAYIDHLFNLIKPKKVFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
R++ +A E +++ ER G ++P ++ FDSN ITPGT+FMA ++ L+YYI+
Sbjct: 102 RSAVEA------EXNMKKAIER-GDEIPKEAP---FDSNAITPGTDFMAKVTEHLKYYIN 151
Query: 180 LRLNNDPGWEKIK 192
+++ D W+ I+
Sbjct: 152 QKVSTDSNWQSIQ 164
>gi|440298458|gb|ELP91094.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 608
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 193/412 (46%), Gaps = 65/412 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +++L P + D S+PNPNG EYDNLY+D+NG+IH
Sbjct: 1 MGVPSLFKYLCRLVPNFTRRARWNDDF---------DFSQPNPNGREYDNLYIDLNGLIH 51
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
TT ++ + + I L +VRPR LL+++IDGV P AKM QQR RRF
Sbjct: 52 GSLDY------TTIEQTIESLNQKILELVSIVRPRSLLFISIDGVCPVAKMVQQRKRRFT 105
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+ D N ITPGT+FM +S ++ +I
Sbjct: 106 PDNE-------------------------------DGNKITPGTDFMEKISTGVESFILS 134
Query: 181 RLNND--PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIM 238
++NN + +IK I+S + PGEGEHKI+ ++R Q+ + H + G DADL++
Sbjct: 135 QMNNVGLDYFRRIKTIVSGVHSPGEGEHKIIEFIRSQKRV-----TESHVICGEDADLLL 189
Query: 239 LALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
L+L H + ILR+ FTP + + GH A K K E +K D
Sbjct: 190 LSLTLHTDNIFILRK--FTPPTKQYS-RPKKNGHGHAKV-AKDKSAKSEKPQKSD----- 240
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ + F++I L L EI+ + +DF+F+ GNDF+P++P +++
Sbjct: 241 VQLFDFVNITLLSNKLVS--MSAEMGKEINRTQLENDFVFLMSLAGNDFVPNVPGVDVYS 298
Query: 359 GAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
G+ + + Y K + G +LT + + F++ + E+ + + R
Sbjct: 299 GSFKMALTCYFK-LSSGGVFLTKNDDINFPAFKEFLEKLRENEEMMVKTMVR 349
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 539 VKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPY 598
V++GE W+ RY + F + EE K V Y +G+ WV YY SW++ Y
Sbjct: 370 VRIGEANWRSRYEKVLF-----QSNEEYMKRGVKEYIKGIVWVYLYYTGHPISWEFGYRP 424
Query: 599 HYAPFASDLKDLDQFNISFEL--GHPFKPFNQLLGVFPSASSHALPEHYRKLM-TDPNSP 655
YAP + L + +I + P P QL+ V P SS LP + + D S
Sbjct: 425 FYAPTLTMLNTYFEVDIKEVITPTPPLSPLVQLVLVLPPKSSRFLPLPLQTIFEEDWFSE 484
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
IS PT +D+NG+ ++GI + F R + V +LT E R+ ++ D+L
Sbjct: 485 ISPKKPT---IDLNGECVGYKGIPLVNFPSIERAKEYVNARISSLTPLEKARDRVLDDIL 541
Query: 716 FVLLSHP 722
FV P
Sbjct: 542 FVFNGIP 548
>gi|330800198|ref|XP_003288125.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
gi|325081816|gb|EGC35318.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
Length = 171
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 31/201 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP ++ +I+ P EYDNLYLDMNGIIH
Sbjct: 1 MGVPRFFRWVSERYPQILQKIIDSTPP-------------------EYDNLYLDMNGIIH 41
Query: 61 PCFHP-EDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C + + +E+ + + +Y+DRLF +RP KL YMAIDGVAPR+K+NQQR RRF
Sbjct: 42 ACSQEFANSLIEFSEEELIRKVCNYVDRLFHTIRPTKLFYMAIDGVAPRSKINQQRQRRF 101
Query: 120 RASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIH 179
S +E+L+Q+ +G+ +P +F+ ITPGT+FM LS ALQ+YI
Sbjct: 102 L-------SVHRDEKLKQQLIADGKPVP----EVIFNRTAITPGTQFMYNLSEALQFYIK 150
Query: 180 LRLNNDPGWEKIKVILSDANV 200
+++ D W +++VI S V
Sbjct: 151 KKISEDLSWREVQVIFSGPEV 171
>gi|66804489|ref|XP_635977.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
gi|60464324|gb|EAL62473.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
Length = 1235
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 68/338 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNG-LEYDNLYLDMNGII 59
MG+P+FYRWL E +P V+ + N NG ++++NLY+DMNG++
Sbjct: 1 MGIPSFYRWLIENFPKVLEN---------------------NLNGEIKFNNLYIDMNGVV 39
Query: 60 HPCF--------------------------HPEDRPAPTTF------DEVFQCMFDYIDR 87
H + +D+ +++ + +F +D+
Sbjct: 40 HNAIKLDHSPTSSSSSSSTTTTPPTTPTTTYSKDKEVVLMLKSELSDEKLKERIFYRLDQ 99
Query: 88 LFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP 147
+ V P LLY+ +DGV PRAK +QR RRF++SK+ D ++ L+ + + R
Sbjct: 100 MVNNVNPSSLLYIGVDGVPPRAKAIEQRKRRFKSSKETVDVIIKQ--LKSKSKPITRDSI 157
Query: 148 PKSDSQVFDSNVITPGTEFMAVLSIALQYYI-HLRLNNDPGWEKIKVILSDANVPGEGEH 206
+ S +FDSN I+P TEF+ + ++ Y L L + + +ILSD+ VPGEGEH
Sbjct: 158 IEQFSLIFDSNSISPATEFIEKVDDWIKDYCKQLSLKR----QNLSIILSDSTVPGEGEH 213
Query: 207 KIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFL 266
KIM Y+R + D HC YG+DADLI L L +H +F ILR+ P C
Sbjct: 214 KIMDYIRQNHPILKKD-GMSHCFYGMDADLIFLGLESHLSNFYILRD----PISLISCST 268
Query: 267 C-GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQ 303
C H C K +F +K V+V P Q
Sbjct: 269 CKANDDHSNYECRSAIALKK-QFQKKSTSVIVRGIPNQ 305
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 530 NSDNPEEDKVKLGEPGWKER---YYEEKFN--AKTPEEREETRKDVVLRYTEGLCWVMHY 584
NS + E + + P +K YY KF+ K ++ ++ D+ +YT GL WV+ Y
Sbjct: 748 NSTSNESSSIVMVPPEFKYDDLLYYRVKFDLIGKPDDQVKKLVDDMCYQYTLGLHWVLRY 807
Query: 585 YYEGVCSWQWFYPYHYAPFASDLKDL--------------DQFNISFELGHPFKPFNQLL 630
Y G +W W+YPYHYAP A DL + +QFN F+L P P L
Sbjct: 808 YVSGCQAWDWYYPYHYAPLAKDLLNYQKRLSKIQDREMVNNQFN--FKLSSPLPPLIHLA 865
Query: 631 GVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLL 690
V P S LP+ + ++ + NSP + Y D++ D NG+ +W+ I L F+D +
Sbjct: 866 SVLPRNSVAFLPDSMKHIVNE-NSPFTASYRDDYKYDFNGENVAWKAIVLLDFMDIEKFK 924
Query: 691 DEVKKI-EHTLTEEEARRNSIMADMLF 716
+ + I + LT+ E +RN I D+ F
Sbjct: 925 EYLLPIVNNELTDNEKKRNLIGNDIKF 951
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 302 YQFLHIWTLREYLDYEF--RIPNPPFE-IDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ +++I + R YL+Y F +I E I+ +++DF +CF++GNDFLPH+P++ I+
Sbjct: 616 FDYVNIDSFRTYLEYYFFEKIEKSKREKINFNRVINDFTVLCFYLGNDFLPHLPSVGIQS 675
Query: 359 GAINLLMAVYKK 370
G+I L+M Y++
Sbjct: 676 GSIELIMCWYRE 687
>gi|355729461|gb|AES09875.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 190
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 87/121 (71%)
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 647
GV SW W+YPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y+
Sbjct: 1 GVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQH 60
Query: 648 LMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 707
LMT +SPI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +R
Sbjct: 61 LMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKR 120
Query: 708 N 708
N
Sbjct: 121 N 121
>gi|389583613|dbj|GAB66347.1| 5'-3' exoribonuclease [Plasmodium cynomolgi strain B]
Length = 638
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 128/250 (51%), Gaps = 45/250 (18%)
Query: 7 YRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPE 66
Y+WL YP V ++I N E D Y+DMNG+IH C H
Sbjct: 2 YKWLTSYYPTVREELIN------------------NERQKEVDIFYVDMNGVIHHCTHAN 43
Query: 67 DRPAPTTFD-EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDA 125
P + E+ + Y+ LF +V+P+ L+Y+ +DGV+P+AKMNQQR RRF +
Sbjct: 44 KETLPVHDEHELLSNILKYLKNLFHLVKPKNLVYVGVDGVSPKAKMNQQRKRRFLSLFKV 103
Query: 126 ADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL--RLN 183
+D++ + + +F+ N IT GT+FM +++AL + + + N
Sbjct: 104 SDNS--------------------NGANLFNPNCITTGTDFMYKINLALNKWFQILKKKN 143
Query: 184 NDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALAT 243
P VI S ++VPGEGEHKI+ ++R N HC+YGLDADLIML+L T
Sbjct: 144 IFP----FDVIFSGSDVPGEGEHKILKFIRENCKRDAAFRNYNHCIYGLDADLIMLSLVT 199
Query: 244 HEVHFSILRE 253
H + ILR+
Sbjct: 200 HLNNIFILRD 209
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
Query: 533 NPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSW 592
N E + E +K YY +KF + P++ + +V +Y EGL W +HYY+ G SW
Sbjct: 440 NAENVREFTDESRYKGYYYLQKFGLEDPKQIQH----IVNKYIEGLFWNLHYYHFGCASW 495
Query: 593 QWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
W YPYHYAP SDL ++ + FE G P+ + L+ V P ++ LPE Y+ + ++
Sbjct: 496 CWEYPYHYAPLCSDLLSFEKSDFFFEKGKPYSAYTHLISVLPQKDNNLLPEAYKNIYSE- 554
Query: 653 NSPISDFYPTDFEVDMNGKRY--------------------SWQGIAKLPFID 685
+ F+P + +D NGK+Y +W+ I LPFI+
Sbjct: 555 -DEVKSFFPENVRIDPNGKKYVLEEGAILTGLPPAQSPIGETWEYIVHLPFIN 606
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 391
+VDD +F+ F VGNDFLPH+P ++I EG++N ++ Y YLT K ++R++
Sbjct: 362 VVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNAYIYYIYRYNNYLTLKDKVHIQRLK 421
Query: 392 HFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQAR 427
++ + + E F KR +AE ++ ++R
Sbjct: 422 IILKILSAQEFSYFLKRG-----NAENVREFTDESR 452
>gi|328767906|gb|EGF77954.1| hypothetical protein BATDEDRAFT_91231 [Batrachochytrium
dendrobatidis JAM81]
Length = 126
Score = 145 bits (366), Expect = 8e-32, Method: Composition-based stats.
Identities = 62/100 (62%), Positives = 79/100 (79%)
Query: 3 VPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPC 62
+PA +RWL+ KYP V ++ IE+ P + +PVDT+ PNPNG EYDNLYLDMNGIIHPC
Sbjct: 8 IPALFRWLSTKYPKVTSECIEDIPQSVGNTIVPVDTTLPNPNGTEYDNLYLDMNGIIHPC 67
Query: 63 FHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAI 102
HPED+PAPTT DE++ +F YIDR+ ++RPRK+LYMAI
Sbjct: 68 CHPEDKPAPTTEDEMYIEIFKYIDRIMAIIRPRKVLYMAI 107
>gi|302853934|ref|XP_002958479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
gi|300256207|gb|EFJ40479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
Length = 1602
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 131/259 (50%), Gaps = 41/259 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP + +L +Y ++ + ++E DG P D LY+DMN IIH
Sbjct: 1 MGVPGLFAFLKRRYGVIARFISKKEDGSWDGAA-PADA------------LYVDMNHIIH 47
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMV------------------------RP 94
C H +DE F+ M Y+ L + P
Sbjct: 48 SCTHANTGSDGLPYDENAAFERMDAYLTALLEIADGGGAAAGADTAAAAAKATNSRPPSP 107
Query: 95 RKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFERE--GRKLPPKSDS 152
+LL++AIDGVAP AKMNQQR+RRF ++ A + E +R E + G + P + S
Sbjct: 108 LRLLFVAIDGVAPIAKMNQQRTRRFLSAHVAEVTDHVEREVRAEMTSQAGGSRTIPDTSS 167
Query: 153 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 212
FD N+I+ GT FM+ ++ ++ + ++ DP + +++VI+SD+ P EGEHKIM ++
Sbjct: 168 SRFDPNIISIGTVFMSRVADRVRAMLRTKVQTDPRFTQLRVIVSDSYEPAEGEHKIMRFI 227
Query: 213 RLQRNLPGYDPNTRHCLYG 231
R R P YDPNTRH +YG
Sbjct: 228 RHLRTRPEYDPNTRHIIYG 246
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 343 VGNDFLPHMPTLEIRE--GAINLLMAVYKKEFRALGGYLTDG-SKPSLRRVEHFIQAVGS 399
GNDFLPH+P+++I + + LLM YK+ + G +T G + + R+ +
Sbjct: 470 AGNDFLPHVPSIDIYDLPSGLELLMVSYKELLPQMKGCITQGVGQINATRLTQLFNKLAR 529
Query: 400 YEDRIFQKRARLHQRHAERIK 420
E+ F +RA L R + + K
Sbjct: 530 DEEAAFVRRAALAARGSRKTK 550
>gi|70933012|ref|XP_737941.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513750|emb|CAH81056.1| hypothetical protein PC000391.04.0 [Plasmodium chabaudi chabaudi]
Length = 314
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 86/108 (79%)
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 214
+DSN+ITPGT+FM LSIAL+Y+I ++ ND W+KI VI SDANV GEGEHKI ++++
Sbjct: 6 WDSNIITPGTQFMHELSIALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKS 65
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQD 262
QR GYDPNTRH ++G+DADLIML+LA+HE +F ILRE++ ++D
Sbjct: 66 QRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDQKED 113
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 303 QFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAIN 362
Q L + LREYL +F + +LE +DDFIF+CF GNDFLPH+P++ I G+I+
Sbjct: 187 QILDLTILREYLYKDFFFDT---KYNLERCIDDFIFICFLCGNDFLPHLPSISIASGSID 243
Query: 363 LLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRARLHQRHAERIKRE 422
L+ +Y+K LG YL + + + +I + E F + ++ +R ++
Sbjct: 244 QLILLYQKVLPVLGDYLINEGSMNFQAFTKYISFIAEVERETFVSQYDFKKKREKRELQK 303
Query: 423 KAQAR 427
A R
Sbjct: 304 DAFKR 308
>gi|310831294|ref|YP_003969937.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
gi|309386478|gb|ADO67338.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
Length = 562
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 184/377 (48%), Gaps = 83/377 (22%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+ WL + Y ++ ++ + N ++ L LD N +IH
Sbjct: 1 MGVPGFFLWLMKNY---------KKNKFVNNIN--------EFNKTDFKWLCLDANCLIH 43
Query: 61 P-CF-----HPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
P CF +P+ + + +++ +YI++L ++V+P + LY+A+DGVAP AK+ QQ
Sbjct: 44 PKCFEVLAENPDFKNLNSLENKMISRCLEYIEKLVLLVKPTEGLYIAVDGVAPVAKIKQQ 103
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
RSRRF++ D A +RL ++ +P ++ ++++ ITPGT+FM ++ +
Sbjct: 104 RSRRFKSVSD----NALYDRL-----KDKHNIP---KNKFWNNSSITPGTDFMMKITKYI 151
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL-QRNLPGYDPNTRHCLYGLD 233
+ + + K+I S N PGEGEHKI+ ++R Q N + + +YGLD
Sbjct: 152 KEW--------ATKQSYKIIFSSGNTPGEGEHKILDFIRQRQINYTNELNSGPYVIYGLD 203
Query: 234 ADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGD 293
ADLI L++A + ++RE HL KGD
Sbjct: 204 ADLIFLSIALNRNDVYLMREA----------------EHLNKG--------------KGD 233
Query: 294 EVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDFLPHM 351
+ Q + + ++E ++Y EI +++DFIF+C+F+GNDFLPH
Sbjct: 234 IL-------QLIDLEVMKESINYTMLQMLEGVEIKPTKTQLINDFIFICYFLGNDFLPHY 286
Query: 352 PTLEIREGAINLLMAVY 368
+L+I + + +L+ Y
Sbjct: 287 QSLDIYDDGLPILLKTY 303
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 537 DKVKLGEPG---WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQ 593
D V+LGE + +RYYE F E + Y +GL WV +YY+ GV SW
Sbjct: 379 DPVRLGEGTFDDYSKRYYEHYFYG----SNNENIIKICYEYIKGLTWVTNYYFYGVPSWD 434
Query: 594 WFYPYHYAPFASDLKD----LDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLM 649
++YPY APF DL LD + F+ G P KP QLL V P S + LP ++L
Sbjct: 435 YYYPYDQAPFLKDLSKVINLLDMTHFKFKKGTPLKPLEQLLAVMPPQSKYLLPTKVQRLF 494
Query: 650 TDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
+ SP+ YP DF+ D KR WQGI LPF++ + E KIE TLT ++ +N
Sbjct: 495 NE-ESPLGHLYPIDFKQDFIHKRKYWQGIPLLPFLEIDTIQKEFSKIEKTLTPKDLHKNR 553
Query: 710 IMADMLF 716
+ + ++
Sbjct: 554 VDKEFIY 560
>gi|432111908|gb|ELK34946.1| 5'-3' exoribonuclease 1 [Myotis davidii]
Length = 1223
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 43/199 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPA--PTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYI 178
FR++K+A E+++++ E+ G LP ++ FDSN ITPG I Y+
Sbjct: 102 FRSAKEA------EDKIKKAIEK-GETLPTEAR---FDSNCITPGY-------INENGYL 144
Query: 179 HLRLNNDPGWEKIKVILSD 197
+L P +EK V LSD
Sbjct: 145 NL-----PRFEKYLVKLSD 158
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 81/114 (71%)
Query: 595 FYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNS 654
+YPYHYAPF SD++++ I FELG PF PF QLL V P+AS + LP Y+ LMT +S
Sbjct: 263 YYPYHYAPFLSDIRNISTLKIHFELGKPFMPFEQLLAVLPAASKNLLPTCYQHLMTSEDS 322
Query: 655 PISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
PI ++YP DF+ D+NGK+ W+ + +PFIDE RLL+ ++ H+L +EE +RN
Sbjct: 323 PIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRN 376
>gi|123432925|ref|XP_001308510.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121890194|gb|EAX95580.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 966
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 173/398 (43%), Gaps = 73/398 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGV F++WL +YP + +S +P+ +D ++D N IIH
Sbjct: 1 MGVAGFFKWLISRYPSICRGA----------------SSGISPS---FDCFFVDFNCIIH 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
DE+ + ++D L +V+P KLLY+++DG AP AK +QRSRRF
Sbjct: 42 NAIRTIQGSKDLIEDELITEVLRFLDILVHVVQPTKLLYISVDGPAPLAKCIEQRSRRFS 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+G+K ++ F N IT GT+FM L + + Y+
Sbjct: 102 G--------------------QGKK----EVAEGFTKNSITIGTKFMNDLHLKILDYLKE 137
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
R+N DP W +I + PGEGEHK+++++R QR ++ + C+Y DAD+ +A
Sbjct: 138 RVNRDPIWAMPHIIYDSYHTPGEGEHKLINFIRYQRAQGTWNEDYSCCIYSPDADIFFIA 197
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L TH +IL++ DK + + AG+F
Sbjct: 198 LNTHMKKIAILKDSSGDLKLADKKY-----------NSASVRFWAGDF------------ 234
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
Y +L I LR+ L EF N E + I DDF + +GNDF+P P I
Sbjct: 235 IYVYLSI--LRQLLAAEFFNSN---EDMVNNITDDFCAISSLLGNDFIPSFPFFNIDN-- 287
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVG 398
N + VY ++ Y+ + + + + F++ V
Sbjct: 288 FNNALEVYFTQYLPKSKYIVENGEFNYSNLSDFLRDVA 325
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEP-GWKERYYEEKFNAKTPEEREETR 567
EN E + L + LRD A+N + E+ K + E+ + KF +E
Sbjct: 308 ENGEFNYSNLSDFLRDV--AYNVGDAEKSVSKQQNLLSYAEKNVQAKFALPEGPGFDEKI 365
Query: 568 KDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA-PFASDLKDLDQFNISFELGHPFKPF 626
K++V + WV++ Y +G+ SW+W+YPY A P K L + +F G P K
Sbjct: 366 KEIVYHVMDSFVWVLNLYTKGILSWEWYYPYSSAPPLLIISKYLQGYKPNFTQGAPPKSL 425
Query: 627 NQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
L+ + P+ S++ LP + + +P SP+ D M+G S+
Sbjct: 426 EVLVSLLPANSANLLPSCLQ-FLAEPGSPVYDI--------MSGSARSFT---------- 466
Query: 687 ARLLDEVKKI----EHTLTEEEARRNSI 710
EVKKI E+ +T+EE RN+I
Sbjct: 467 REYFAEVKKIIQEKENEMTDEEKIRNTI 494
>gi|15078725|ref|NP_149475.1| 012L [Invertebrate iridescent virus 6]
gi|82013011|sp|Q9QSK5.1|EXON_IIV6 RecName: Full=Putative exonuclease 012L
gi|5725643|gb|AAD48147.1|AF083915_1 012L [Invertebrate iridescent virus 6]
Length = 624
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 172/424 (40%), Gaps = 125/424 (29%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ F++WL + E ID + N D L +DMNGIIH
Sbjct: 1 MGIKYFFKWLKTNHS--------ESIKCID----------RHDNSQCIDVLLIDMNGIIH 42
Query: 61 PC------FHPEDRPAPTTFDE-VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
+ P D+ V+ + IDR+ + +P++L+ + IDGVAPR+K Q
Sbjct: 43 NSAQEVYGYGSFSFPKENACDKKVYSLVCRQIDRMVIQFKPKELI-LCIDGVAPRSKQIQ 101
Query: 114 QRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIA 173
QR RRF A+ D EF + K ++ FDSN I+PGTEFM L
Sbjct: 102 QRQRRFLAAHDRKKPGT-------EFNFDCN----KGNTSKFDSNSISPGTEFMHNLGRY 150
Query: 174 LQYYIHLRLNNDPG------------------------------WEKIKVILSDANVPGE 203
+ IH++ P W + V+ ++ V GE
Sbjct: 151 ID--IHIKKKQKPAFTGRETTDAPQNNWRNKDQSWRQKVDDTAEWSNLTVVFANDKVSGE 208
Query: 204 GEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML---ALATHEV-HFSILREVVFTPG 259
GEHK++ Y+R N +C+YG DADLIML AL T + + +LR+
Sbjct: 209 GEHKLLDYIRKYGN-----SYYTYCIYGSDADLIMLSMSALTTTAIKNIYVLRDEY---- 259
Query: 260 QQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR 319
P +L N K + WT +
Sbjct: 260 --------KSPNYLLINIPNFVKNLIKDVKSN----------------WTDK-------- 287
Query: 320 IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYL 379
+D + ++DFIFMCF VGNDFLPH+P++EI I ++A Y K Y+
Sbjct: 288 -------LDEKRFINDFIFMCFMVGNDFLPHIPSIEIMTNGIESMLAFYTKN----KNYI 336
Query: 380 TDGS 383
TD +
Sbjct: 337 TDNN 340
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 65/256 (25%)
Query: 500 ENSFETDPQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
E S + N E F+ +LL S ++ ++ V + E ++E+Y ++ F
Sbjct: 362 EQSLCNEKVNNSEYFR---DDLLESSSFLVTNEFGQQKCVNINE--YREKYMKKHF---- 412
Query: 560 PEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL------------ 607
E+ + L Y EG+ WV+ YY V W+W Y Y YAP + +
Sbjct: 413 -----ESSSEASLMYLEGMQWVLSYYTLKVPDWEWSYKYDYAPNLTSIIEAMSFKQIGGT 467
Query: 608 --KDLDQFNI-------SFELGHPFKPFNQLLG-VFPSA--------------SSHALPE 643
K+ +Q+ + S E+ F + VF ++ SS A+P
Sbjct: 468 SKKEKNQYKLFPVNSVNSTEVATSSSGFQKSFSMVFQNSLQNTKDWRDKKTKTSSDAIPP 527
Query: 644 HYRKLMTDP---------------NSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
++ L P + + + P + +D GKR W+GI LP +D+
Sbjct: 528 FHQLLFILPPDSSDLLPYPLCEALTNELKIYAPKELIIDRAGKRQEWEGIVLLPKLDQKV 587
Query: 689 LLDEVKKIEHTLTEEE 704
+ + K + +TE++
Sbjct: 588 VTECYLKYKPYVTEKK 603
>gi|145507546|ref|XP_001439728.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406923|emb|CAK72331.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 118/213 (55%), Gaps = 31/213 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAF+RWL + P + +V+E D S + N + DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLCARNPKALLEVLENS-----------DESCLS-NNPDIDNLYLDMNGIIH 48
Query: 61 PCFHPEDR--PAPTTFDEVFQCMFDYIDRLF-VMV---RPRKLLYMAIDGVAPRAKMNQQ 114
PC HP+ P P T+D++F +F YIDRL +MV P ++ +D P+
Sbjct: 49 PCSHPDQGGIPIPVTYDDMFVNVFHYIDRLVDIMVLPQEPNQISKEVVDLEQPKNPF--- 105
Query: 115 RSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIAL 174
FR ++ + E + + R L + FDSN ITPGTEFM L+IAL
Sbjct: 106 ---EFRKKRNVYEITGE-------LKAQIRTLQNTYIEKNFDSNQITPGTEFMQKLNIAL 155
Query: 175 QYYIHLRLNNDPGWEKIKVILSDANVPGEGEHK 207
QYYI+ R+NN+P + + +I +D+++PGEGE +
Sbjct: 156 QYYIYDRMNNNPLFRNVLIIFNDSSIPGEGERQ 188
>gi|70925173|ref|XP_735320.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508876|emb|CAH84746.1| hypothetical protein PC301213.00.0 [Plasmodium chabaudi chabaudi]
Length = 241
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 104/168 (61%), Gaps = 9/168 (5%)
Query: 513 EFKAKLKELLRDKSDAFNSDNPEEDKVKLG---EPG-WKERYYEEKFNAKTPEEREETRK 568
EF LKE ++ ++ +NP+ED V+LG +P + RYY KF+ + +E K
Sbjct: 78 EFNLLLKEAIKKANEC---ENPKED-VELGADDDPNDLRARYYRSKFHLDETDNVDEFVK 133
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
+VV +Y EGL WV+ YY++ W W+YPY+YAP +SDL + +ISFE P PF Q
Sbjct: 134 EVVYKYIEGLAWVLCYYFQACPMWHWYYPYYYAPLSSDLL-IKDISISFEEDEPLLPFEQ 192
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQ 676
LL V PS SSH LP+ YR+LM SPI DFYP F+ + NGK++ +Q
Sbjct: 193 LLCVLPSNSSHCLPKMYRELMLKNESPIVDFYPKTFKEEENGKKFKYQ 240
>gi|343959368|dbj|BAK63541.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 370
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 105/175 (60%), Gaps = 10/175 (5%)
Query: 617 FELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 675
FE G PFKP QL+GVFP+AS + LP +RKLM+DP+S I DFYP DF +D+NGK+Y+W
Sbjct: 5 FEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAW 64
Query: 676 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCK 735
QG+A LPF+DE RL ++++ LT EE RRNS+ D+LFV HPL I L
Sbjct: 65 QGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILEL----Y 120
Query: 736 QLKIKERVEVKERLNPELSDGMNGYISPCAGDPHP-PVFRSPVASMEDIMGNQVL 789
Q E V+V PEL G+ G S P + SPV + D+ N V+
Sbjct: 121 QTGSTEPVDVP----PELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVV 171
>gi|67596043|ref|XP_666049.1| pacman protein [Cryptosporidium hominis TU502]
gi|54656955|gb|EAL35817.1| pacman protein [Cryptosporidium hominis]
Length = 734
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 565 ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFA-------SDLKDLDQFNIS- 616
E V + Y GL WV+ YYY GV SW W+YPYHYAP+ SD+K+ ++ S
Sbjct: 112 EISDQVCIHYLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVELLSDVKNENKIKESL 171
Query: 617 ---FELGHPFKPFNQLLGVFPSASSH-ALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKR 672
F LG PF F QL+ V P S LP+ + +M D N+P+S+FYP+ F+ D NG +
Sbjct: 172 IGEFNLGKPFTQFEQLMSVLPPKSGKICLPKEFYNMMIDKNNPLSEFYPSKFKQDPNGNK 231
Query: 673 YSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASI 727
W+ +A LPFID+ LL+ V +E+ + RN + D+L+ PL I
Sbjct: 232 QRWKWVALLPFIDQKVLLETVIPLENEMDVLSKYRNKLGCDILYSFKFSPLKNII 286
>gi|296085877|emb|CBI31201.3| unnamed protein product [Vitis vinifera]
Length = 85
Score = 132 bits (331), Expect = 9e-28, Method: Composition-based stats.
Identities = 62/80 (77%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND-FLPHMPTLEIR 357
KKPY+FL+IWTLREYL+YE RIPN PF ID E +VDDFIFMCFFVGND FLP M L I
Sbjct: 3 KKPYRFLNIWTLREYLEYEMRIPNLPFGIDFEHLVDDFIFMCFFVGNDFFLPRMLALVIC 62
Query: 358 EGAINLLMAVYKKEFRALGG 377
EGAINLLMAVYKKE +A+GG
Sbjct: 63 EGAINLLMAVYKKELKAMGG 82
>gi|168067648|ref|XP_001785722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662628|gb|EDQ49457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 68
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 65/68 (95%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA+KYPL+V DVIE+E VI+GVK+P+DT++PNPNGLEYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADKYPLIVVDVIEDEQHVIEGVKVPIDTTQPNPNGLEYDNLYLDMNGIIH 60
Query: 61 PCFHPEDR 68
PCFHPEDR
Sbjct: 61 PCFHPEDR 68
>gi|159110732|ref|XP_001705612.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157433699|gb|EDO77938.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 1956
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 183/450 (40%), Gaps = 123/450 (27%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLE-YDNLYLDMNGII 59
MGV +RW+ E+YPL V + P + + DNLY+D N +I
Sbjct: 1 MGVARLFRWIYERYPLAV--------------------TTPGASFVSRIDNLYIDFNALI 40
Query: 60 HPCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
H +D P TF E +F + DYI L +PRK +++A DGVAP AK QQR+R
Sbjct: 41 HESIR-KDSYIPFTFTEAMIFGEIADYIQVLVSTAQPRKRIFIATDGVAPDAKAKQQRTR 99
Query: 118 RFRASKD-------------AADSAAEEERLRQEFEREG----RKLPPKSDSQVFDSNVI 160
R+ + + A +E E L + G + LPP++ I
Sbjct: 100 RYMGAYEKIGTKIYRDSIAGTATVLSEAELLTSQHIANGNDDDQTLPPQNVKAA-----I 154
Query: 161 TPGTEFMAVLSIALQYYIHLRLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 219
+PGT FM L L ++ ++++ PGW + V +S ++ GEGEHKIM+ +R R L
Sbjct: 155 SPGTLFMDRLHSFLIAFVAKNVDSEAPGWVQPSVTISGWDMCGEGEHKIMAEIRRLRQLE 214
Query: 220 G----------------YDPNTRHCLYGLDADLIMLALA--THEVHFSILREVVFTPGQQ 261
+ + HC+ GLDAD+++L L H V+ L + F
Sbjct: 215 ELAASRADCSETSFSEFFPHHESHCICGLDADIVLLGLGLHVHNVYVLRLWQPPFVADTV 274
Query: 262 D------------------KCF---------------------LCGQ--PGHLAANCEGK 280
D CF LC Q P +
Sbjct: 275 DILESKRHPTDRELIVVDLSCFRECIVAELISNRFHNPKLLHALCHQSFPHTYMQRLKNC 334
Query: 281 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 340
R + E ++ G + Q IW+ P ++ DFI +
Sbjct: 335 YPRLSREMNDSGMLSRMSLNVLQEAFIWS--------------PLA---SALIVDFIILT 377
Query: 341 FFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
FVGNDFLP +P + ++ +++ +A+Y++
Sbjct: 378 LFVGNDFLPEVPGMLVKNNSLDNCIAIYRE 407
>gi|308160629|gb|EFO63105.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 1954
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 186/450 (41%), Gaps = 123/450 (27%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLE-YDNLYLDMNGII 59
MGV +RW+ E+YPL V + P + + DNLY+D N +I
Sbjct: 1 MGVGRLFRWIYERYPLAV--------------------TTPGASFVSRIDNLYIDFNALI 40
Query: 60 HPCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
H +D P TF E +F + DYI L V+PRK +++A DGVAP AK QQR+R
Sbjct: 41 HESIR-KDSYIPFTFTEAMIFGEIADYIQVLVSTVQPRKRIFIATDGVAPSAKAKQQRTR 99
Query: 118 RFRASKDA-------------ADSAAEEERLRQEFEREG----RKLPPKSDSQVFDSNVI 160
R+ + ++ A +E E L + G + LPP++ I
Sbjct: 100 RYMGAYESVGVKLYRNNIAGTATILSEVEFLTSKHIANGNNDDQTLPPQNLKAA-----I 154
Query: 161 TPGTEFMAVLSIALQYYIHLRLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 219
+PGT FM L L ++ ++++ PGW + V +S ++ GEGEHKIM+ +R + L
Sbjct: 155 SPGTLFMDRLHSFLIAFVAKNVDSEAPGWVQPAVTISGWDMCGEGEHKIMAEIRRLKRLE 214
Query: 220 -----GYDPNTR-----------HCLYGLDADLIMLALA--THEVHFSILREVVFTPGQQ 261
G D + + HC+ GLDAD+++L L H V+ L + F
Sbjct: 215 DLATIGVDYSEKSFSEFFPHHESHCICGLDADIVLLGLGLHVHNVYILRLWQPPFVTDTV 274
Query: 262 D------------------KCF---------------------LCGQ--PGHLAANCEGK 280
D CF LC Q P
Sbjct: 275 DILESKRHPTDKGLIVVDLSCFRECIVAELISNRFHDPKLLHALCHQSFPHSYMQRLRNC 334
Query: 281 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMC 340
R + E ++ G + Q +W+ P ++ DFI +
Sbjct: 335 YPRLSREMNDSGMLSRMSLSVLQEAFVWS--------------PLG---SALIVDFIILT 377
Query: 341 FFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
FVGNDFLP +P + I+ +++ +A+Y++
Sbjct: 378 LFVGNDFLPEVPGMLIKNNSLDNCIAIYRE 407
>gi|340501949|gb|EGR28676.1| hypothetical protein IMG5_170600 [Ichthyophthirius multifiliis]
Length = 698
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 39/261 (14%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP ++ W+ +YP + + + G K VD + N Y + D+N +
Sbjct: 1 MGVPGYFGWICRRYPFCIRKIYQ------SGKKKYVDCLYIDVNSFCYQYIKDDLNQYL- 53
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
P + D+++Q + +I+ + ++ P+ +Y+ +DG PRAKMNQQR RRF
Sbjct: 54 --------LNPQSLDQIYQNILTHIESIIQLIEPQSQVYLMMDGTCPRAKMNQQRQRRFH 105
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
A K+ + +++F+ +G ++ Q SN ++PGT FM L+ ++ +
Sbjct: 106 AQKNLNQT-------KEDFKNQGIQIK----EQTVPSNSVSPGTPFMFELNKRIREHFEK 154
Query: 181 RLN--------NDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGL 232
++ D ++++ +I+SD+N GEGEHKI+ +R +N HC+
Sbjct: 155 KIQEEQPLNEKTDFTYKRLHIIISDSNCQGEGEHKILEVIRKHKNFK-----LTHCIVSP 209
Query: 233 DADLIMLALATHEVHFSILRE 253
DADLI+L+L+ ILRE
Sbjct: 210 DADLILLSLSAIGRKILILRE 230
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIR------EGAINLLMAVYKKEFRALGGYLTDGSKP 385
I+DD +F+ F GNDFLP + I+ + ++ L+ ++K + YL++
Sbjct: 359 ILDDIVFLSLFAGNDFLPKQNYIYIKKTFYKEQHILDKLLCLHKDYLKTAQNYLSERGII 418
Query: 386 SLRRVEHFIQAVGSYE 401
+ +F Q V + E
Sbjct: 419 QFSNILNFFQIVANLE 434
>gi|429964640|gb|ELA46638.1| hypothetical protein VCUG_01864 [Vavraia culicis 'floridensis']
Length = 707
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 25/264 (9%)
Query: 150 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
++ + FD N ITPGT FM L + +I RL NDP ++ + I S+ GEGE KIM
Sbjct: 233 TEDEAFDKNAITPGTRFMYDLEKRMDQFIRNRLVNDPKYKNLCFIYSNGRRAGEGEQKIM 292
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQ-QDKCFLC 267
+ +R +N N +H +Y DADLI L + H + I+RE + F Q Q C C
Sbjct: 293 TLIRKMKN-----RNLKHTIYSPDADLIFLGTSLHGRNVKIMREDLEFVHLQRQHYCEKC 347
Query: 268 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI 327
G+ GHL+ C A FD + ++ ++ +H YEF
Sbjct: 348 GKKGHLSTYCNKLALFSCIFFDLIVLKRILSEELSMLVHT-------SYEFNR------- 393
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 387
+VDD+I M F GNDFLP + ++R AI +L + + F Y+T +
Sbjct: 394 ----MVDDWILMSFLAGNDFLPTLQCFDVRFEAIEILTKLLAENFNQTKKYITYKGEIDF 449
Query: 388 RRVEHFIQAVGSYEDRIFQKRARL 411
+ +F + + +ED ++ K+ +L
Sbjct: 450 SVLRNFFKILSQHEDSLYVKKKKL 473
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 13/222 (5%)
Query: 509 ENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRK 568
++++ K K+LL D F E+ + L K RYY+ K + K+ ERE
Sbjct: 461 QHEDSLYVKKKKLLADTRRRFQIKGFFEN-IPLETTYGKTRYYDTKLSLKS--EREVI-- 515
Query: 569 DVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQ 628
V Y GL WV YY +G +W+WFYPY YAPFA D+ ++ + P Q
Sbjct: 516 TVCREYILGLSWVFKYYVKGATNWEWFYPYDYAPFACDIANVRSMPYLNKRTEPLDCLQQ 575
Query: 629 LLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEAR 688
+ V P S +P+ PI + +PT+ ++DM K WQG+A LP ID
Sbjct: 576 QMLVMPPQSKGLVPKEMH--------PIFNSFPTEIKIDMFDKLLPWQGVAILPIIDIET 627
Query: 689 LLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTL 730
LL ++K+ + +A D+ +V ++ L + +L
Sbjct: 628 LLYQIKEKRSLIKYNDAILGIESRDLFYVGSNNKLFKCLKSL 669
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 68/127 (53%), Gaps = 21/127 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RWL +KYP V+ K PN D LY+D N IIH
Sbjct: 32 MGVPSLFRWLTKKYPQVI--------------------EKATPNN-PTDVLYIDFNAIIH 70
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
P D P P DE+ Q + ID + PRK++ ++ DGVAPRAK+NQQRSRR+R
Sbjct: 71 ISCAPSDGPTPVNEDEMMQNVEKNIDSIVSKCLPRKMIVISTDGVAPRAKLNQQRSRRYR 130
Query: 121 ASKDAAD 127
+ +A +
Sbjct: 131 SIIEALE 137
>gi|384249414|gb|EIE22896.1| single-stranded RNA 5, partial [Coccomyxa subellipsoidea C-169]
Length = 167
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 29/193 (15%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP + WL +KYPL+V P +I D DNLY+DMN +IH
Sbjct: 1 MGVPGLFGWLRKKYPLIV------RPASAGAEEIQGDGDS------FCDNLYIDMNHVIH 48
Query: 61 PCFHPEDRPAP-TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C HP R P + +E+F M Y+D LF RPR+L +A+DGVAP+AKMNQQR+RRF
Sbjct: 49 ACTHPSWRCTPYLSEEEMFLDMQIYLDHLFNTARPRRLFMVAMDGVAPQAKMNQQRTRRF 108
Query: 120 RASKDAADSAAEEERLRQEFEREGR--KLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
+A E L +E E E R +LP FD NVITP T FMA L+ L+ +
Sbjct: 109 --------FSAYREELSKELEIEARIPELPS------FDGNVITPSTAFMARLAGMLRAF 154
Query: 178 IHLRLNNDPGWEK 190
+L DP W +
Sbjct: 155 FAAKLGADPCWAR 167
>gi|196007658|ref|XP_002113695.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
gi|190584099|gb|EDV24169.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
Length = 142
Score = 125 bits (315), Expect = 8e-26, Method: Composition-based stats.
Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 21/122 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+RW++E+YP ++ +I+E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWISERYP-CLSQIIKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP+D A E +F +F YI+ LF +++PRK+L+MAIDG+APRAKMNQQRSRR
Sbjct: 42 NCSHPDDANAHFRISEEKIFLDIFSYIEVLFRIIKPRKVLFMAIDGIAPRAKMNQQRSRR 101
Query: 119 FR 120
FR
Sbjct: 102 FR 103
>gi|218199347|gb|EEC81774.1| hypothetical protein OsI_25462 [Oryza sativa Indica Group]
Length = 188
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGV AFYRWLA++YP V+D +EE + G +PVD +PNPNGLE++NLYLDMNGIIH
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEPVELEPGAFVPVDLCRPNPNGLEFNNLYLDMNGIIH 60
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCFHPE PAPTT+DEVF+ + + L VR A G A + +Q R
Sbjct: 61 PCFHPEGHPAPTTYDEVFKFLVGFSTYL---VR----FLGAFSGAALKGNFVEQDECVAR 113
Query: 121 ASKDAADSAAEEERLRQEF 139
K AA + +L +
Sbjct: 114 NFKQAAKLLGLDSKLEKNL 132
>gi|440492471|gb|ELQ75035.1| 5'-3' exonuclease HKE1/RAT1 [Trachipleistophora hominis]
Length = 606
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 25/264 (9%)
Query: 150 SDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIM 209
++ + FD N ITPGT FM L + +I RL N+P ++ + I S+ GEGE KIM
Sbjct: 197 TEDEAFDKNAITPGTRFMYDLEKRMDKFIRERLANNPMYKNLCFIYSNGRRAGEGEQKIM 256
Query: 210 SYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQ-QDKCFLC 267
+ +R +N N +H +Y DADLI L + H + I+RE + F Q Q C C
Sbjct: 257 TLIRKMKN-----RNLKHTIYSPDADLIFLGTSLHGRNVKIMREDLEFVYLQRQHFCEKC 311
Query: 268 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI 327
G+ GHL+ C A FD ++V K+ L E L + +E
Sbjct: 312 GKKGHLSTYCNKLALFSCIFFD-----LIVLKR--------ILSEELSM---LITTSYEF 355
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSL 387
+ + DD+I M F GNDFLP + ++R AI +L + + F Y+T +
Sbjct: 356 NR--MADDWILMSFLAGNDFLPTLQCFDVRFEAIEILTKLLAENFNRTKKYITYKGEIDF 413
Query: 388 RRVEHFIQAVGSYEDRIFQKRARL 411
+++F + + YED ++ K+ +L
Sbjct: 414 AVLKNFFRILAHYEDHLYIKKKKL 437
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 517 KLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTE 576
K K+LL D F E+ + L K RYY+ K + K+ ERE V Y
Sbjct: 433 KKKKLLTDTRRRFQIKGFFEN-ISLETTYGKTRYYDTKLHLKS--EREVI--TVCREYIL 487
Query: 577 GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSA 636
GL WV YY +G +W+WFYPY YAPFA D+ ++ + P Q + V P
Sbjct: 488 GLSWVFKYYVKGATNWEWFYPYDYAPFACDIANVRSMPYLNKRTEPLDCLQQQMLVMPPQ 547
Query: 637 SSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
S +P+ PI D +PT+ ++DM K WQG+A LP ID
Sbjct: 548 SKGLVPKEMH--------PIFDSFPTEIKIDMFDKLLPWQGVAILPIID 588
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 21/127 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP+ +RWL +KYP ++ + P D LY+D N IIH
Sbjct: 1 MGVPSLFRWLTKKYPQIIEKATPKNPT---------------------DILYIDFNAIIH 39
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
P D P P DE+ + ID + PRK++ ++ DGVAPRAK+NQQR+RR+R
Sbjct: 40 ISCTPSDGPTPVNEDEMMNNIEKNIDSIVSKCLPRKMIVISTDGVAPRAKLNQQRARRYR 99
Query: 121 ASKDAAD 127
+ +A +
Sbjct: 100 SIIEALE 106
>gi|307109532|gb|EFN57770.1| hypothetical protein CHLNCDRAFT_143098, partial [Chlorella
variabilis]
Length = 234
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 127/286 (44%), Gaps = 104/286 (36%)
Query: 3 VPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDM------- 55
+P FYRWL+E+YPLV +P V I DNLYLDM
Sbjct: 4 IPKFYRWLSERYPLV------NQPGGATVVPI-------------IDNLYLDMVSEAAGG 44
Query: 56 ------------------------------NGIIHPCFHPEDRPAPTTFDEVFQCMFDYI 85
NGIIH C H + T +E+ +F Y+
Sbjct: 45 SMGAAKGSSSSSSARRAHAACRCLRQGGAPNGIIHNCTHGNNPDVRLTEEEMILKIFTYL 104
Query: 86 DRLFVMVRPR----KLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFER 141
D+LF +V+P+ KLL+MAIDG APRAKMNQQR+RRF+++++A ++ + R
Sbjct: 105 DKLFHIVKPQAGGGKLLFMAIDGSAPRAKMNQQRARRFKSAREAQEAM-------EAAVR 157
Query: 142 EGRKLPPKSDSQVFDSNVITPGTE--------FMAVLSIALQYYIHLRLNNDPGWEKIKV 193
G + P+ D++ FDSN ITPGT + +L A LR P W++
Sbjct: 158 RGEPV-PEPDAR-FDSNCITPGTREGTLPRCGTLCMLGDAALRCAALRCAALPCWKR--- 212
Query: 194 ILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
P Y PN RHCLYGLDADLIML
Sbjct: 213 ------------------------RPDYAPNMRHCLYGLDADLIML 234
>gi|339906034|ref|YP_004732831.1| hypothetical protein WIV_gp048 [Wiseana iridescent virus]
gi|308051904|gb|ADO00391.1| hypothetical protein [Wiseana iridescent virus]
Length = 566
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 175/402 (43%), Gaps = 97/402 (24%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDN---LYLDMNG 57
MG+ F++W + +P V E ++ + + + +GL +N L LD+NG
Sbjct: 1 MGIKYFFKWFKDSFPKTVKKPFGRED---QNLRDALANCEDDVDGL--NNPFLLLLDLNG 55
Query: 58 IIHPC---------FHPED---RPAPTTFDE----VFQCMFDYIDRLFVMVRPRKLLYMA 101
IIH F P+ + P E VF+ + + I+ L V + P++++ +
Sbjct: 56 IIHTSCQKIYKYGSFEPKSLLKKSPPINSGEKDLLVFEDVLNSINSLVVKIDPKEIV-LC 114
Query: 102 IDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVIT 161
IDGVAP +K QQR RRF + K FDSN I+
Sbjct: 115 IDGVAPISKQIQQRQRRFLSKKTNGG---------------------------FDSNCIS 147
Query: 162 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVI-LSDANVPGEGEHKIMSYVRLQRNLPG 220
PGTEF+ L + L+ I +L D W + I D+ VPGEGEHK+ ++R
Sbjct: 148 PGTEFLYKLGLYLKSNIEKKLEKD--WLNVTTIYFMDSLVPGEGEHKLFDFLR-SNQAKI 204
Query: 221 YDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK 280
+ N + G DADLIML+L + L+E + ++D
Sbjct: 205 INENMGIIVVGNDADLIMLSLLISTI---FLKENLIYILRED------------------ 243
Query: 281 AKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFE-IDLECIVDDFIFM 339
+ K Y + I L++ + F + P F+ D E +V DF+ +
Sbjct: 244 --------------LTSKKLDYLLISITQLKKNI-LNFAMEKPKFKHYDFEYVVCDFVIL 288
Query: 340 CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD 381
CF VGNDFLP +P I +G ++L+M K + GYLT+
Sbjct: 289 CFMVGNDFLPPIPLFNIYDGGLDLMM----KYYFTTPGYLTN 326
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 558 KTPEEREETRKDVVLRYTEGLCWVMHYYYEG--VCSWQWFYPYHYAPFASDL-----KDL 610
K+ + K +V Y + + WV +YY G W+ +YP +AP DL
Sbjct: 396 KSYSIHHKINKKLVQLYVKEIEWVFNYYTYGGFTVDWKMYYPSQFAPTPVDLLHYLKTSK 455
Query: 611 DQF----NISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEV 666
QF S H PF QLL + P SS LP+ K++ + +S F+P + ++
Sbjct: 456 HQFAQSCGTSIPQTHQIDPFYQLLCILPPHSSDLLPKPLNKVLLEN---LSHFHPKEIDI 512
Query: 667 DMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRN 708
D++GK W+GI LP ++ + + ++++ +RN
Sbjct: 513 DLSGKLNEWEGIPILPPLNHNEIFNIYTANIKLCSKDDLKRN 554
>gi|68067452|ref|XP_675691.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495020|emb|CAH99326.1| hypothetical protein PB000181.03.0 [Plasmodium berghei]
Length = 167
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIE--EEPVVIDGVKIP--------------VDTS----- 39
MGVP FY+WL +YP + V E + V I +I V+ +
Sbjct: 1 MGVPTFYKWLVTRYPKIAKAVYETRDNDVYIRRARINENGEFYKVCDLGAYVNNTDENHC 60
Query: 40 KPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLY 99
N NG +DN+YLDMNGIIH C H + T +E+F +F YI+RLF ++ P+KLLY
Sbjct: 61 SDNVNGY-FDNMYLDMNGIIHLCSHGDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKLLY 119
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP 147
MAIDGVAP+AKMNQQRSRRF++ + LR +F E R +P
Sbjct: 120 MAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRNKFLSENRNVP 167
>gi|109287937|ref|YP_654631.1| hypothetical protein MIV059L [Invertebrate iridescent virus 3]
gi|123808652|sp|Q197A1.1|EX0N_IIV3 RecName: Full=Putative exonuclease 059L
gi|106073560|gb|ABF82089.1| hypothetical protein MIV059L [Aedes taeniorhynchus iridescent
virus]
Length = 560
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 165/402 (41%), Gaps = 109/402 (27%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ F+RW + +P V K K + + E L LD+NGIIH
Sbjct: 1 MGIKYFFRWYKDSFPNTVT-------------KYSTKNHKKSQDTDEPFLLLLDLNGIIH 47
Query: 61 PC---------FHPED--RPAPTTFDE-----VFQCMFDYIDRLFVMVRPRKLLYMAIDG 104
F P++ + +P + V++ + ID L +V PR+L+ + IDG
Sbjct: 48 TSCQKIYKYGSFEPKNLLKKSPPVYKGEKDVLVYEDVLASIDSLVALVEPRELV-LCIDG 106
Query: 105 VAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGT 164
VAP +K QQR RRF K FDSN I+PGT
Sbjct: 107 VAPVSKQIQQRQRRFITHKTDGG---------------------------FDSNCISPGT 139
Query: 165 EFMAVLSIALQYYIHLRLNNDPGWEKIKVI-LSDANVPGEGEHKIMSYVRLQRNLPGYDP 223
EF+ L + L+ ++ +L + W + I D+ VPGEGEHK+ ++R + D
Sbjct: 140 EFLFQLGLYLKTHLESKLEKE--WLNVSTIYFMDSLVPGEGEHKLFDFLRTHQT-RIVDT 196
Query: 224 NTRHCLYGLDADLIMLALATH-----EVHFSILREVVFTPGQQDKCFLCGQPGHLAANCE 278
+ G DADLIML+L E SILRE + T + D +L L
Sbjct: 197 KFNIVVVGNDADLIMLSLLVSVLFIKENPLSILREDL-TSKKLD--YLLVDINLLKDTIY 253
Query: 279 GKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIF 338
A R F PY D E ++ DF+
Sbjct: 254 QNASRDKPRF-----------TPY-------------------------DFEFVICDFVV 277
Query: 339 MCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLT 380
MCF +GNDFLP +P I +G +++L+ K + GY+T
Sbjct: 278 MCFMIGNDFLPSVPLFNIYDGGLDMLL----KYYFTTAGYIT 315
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 565 ETRKDVVLRYTEGLCWVMHYY-YEGVC-SWQWFYPYHYAPFASDLKDLDQFNISFELGHP 622
+ K +V Y E + W+ +YY Y VC W +YP +AP A DL ++F
Sbjct: 399 KITKSLVHSYLEEIKWIFNYYAYGAVCIDWNMYYPSQFAPTALDLSFA---TLTFTSQSG 455
Query: 623 FK--------PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYS 674
K PF QLL + P SS LP+ KL+ + D +P + ++D +GK
Sbjct: 456 LKERKKCLTDPFFQLLCILPPHSSDLLPDPLNKLLV---QKLVDGHPIEIKMDYDGKLNE 512
Query: 675 WQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNS 709
W+ I LP +D ++L H ++E+ +RN+
Sbjct: 513 WEAIPILPPLDYNKILKMYNDHIHQCSKEDLKRNT 547
>gi|74184155|dbj|BAE37081.1| unnamed protein product [Mus musculus]
Length = 109
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 87/127 (68%), Gaps = 21/127 (16%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+DNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKDA 125
FR++K+A
Sbjct: 102 FRSAKEA 108
>gi|283771378|gb|ADB28925.1| exonuclease XRN1 domain [Zea mays subsp. mays]
Length = 236
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Query: 507 PQENKEEFKAKLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREET 566
P+ + E + KL +LL FN +NP D ++LG PGWK R++ E F AKT E +
Sbjct: 78 PESERPELRQKLDDLL------FNEENPY-DSIRLGLPGWKSRFFREHFGAKTSSEIGKL 130
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPF 626
+ D+ +Y EGLCWV+ Y+ V SW W+YP++ APF SDLK L + ISF + P +PF
Sbjct: 131 QNDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRIEISFTVDKPLRPF 190
Query: 627 NQLLGVFP 634
+QL+ V P
Sbjct: 191 DQLMAVLP 198
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 359 GAINLLMAVYKKEFRALGGYLTD--------GSKPSLRRVEHFIQAVGSYEDRIFQKRAR 410
GA++LL+ VYK F +GGY+T+ G+ + R+E F + YED+IF KR
Sbjct: 1 GAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLEVSRLETFFHELSMYEDKIFLKRYD 60
Query: 411 LHQ 413
L Q
Sbjct: 61 LKQ 63
>gi|16768996|gb|AAL28717.1| LD13761p [Drosophila melanogaster]
Length = 346
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 16/174 (9%)
Query: 617 FELG-HPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSW 675
FE G PF P QL+GVFP+ASS +PE + KLM+DP SPI DFYP DF++D+NGK+++W
Sbjct: 2 FEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAW 61
Query: 676 QGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCK 735
QG+A LPF+DE RL + LT EE +RN + L++ P H K
Sbjct: 62 QGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYISNQSP----------HYK 111
Query: 736 QL-KIKERVEVKERLNPELS-DGMNGYISPCAGDPH-PPVFRSPVASMEDIMGN 786
++ KI E+ + E + +S DGM G + + V +SP++ + DI N
Sbjct: 112 KVKKISEKDD--ESVCKAISFDGMRGTLGKTELNTAISGVLKSPISGLSDINDN 163
>gi|357289551|gb|AET72864.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 12T]
gi|357292303|gb|AET73639.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 14T]
Length = 526
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 173/389 (44%), Gaps = 78/389 (20%)
Query: 50 NLYLDMNGIIHPCFHPEDRPAPTTF-DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPR 108
NLY+D N II+ + F + + Q + D I+ + ++P K + +A DGV P
Sbjct: 29 NLYIDSNSIIYDAIDFSLFQNKSQFENHIIQTVIDKIELIITTIKPTKNIILAFDGVPPF 88
Query: 109 AKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 168
AK+NQQ++RR++ S + + +P +D+ ITPGTEFM
Sbjct: 89 AKLNQQKNRRYKTSYQST--------------LFSKNVP-------WDTTAITPGTEFMD 127
Query: 169 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH- 227
L+ L+ + ++ +ILS ++PGEGEHK+ +VR + N +H
Sbjct: 128 KLNDTLKNHF------GDKYKSNNLILSLTDIPGEGEHKLFEFVR--------NNNHKHD 173
Query: 228 --CLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGK---AK 282
+YG+D+DLIML+L + SI +L + H ++ + AK
Sbjct: 174 NTVIYGMDSDLIMLSLNHKKYTNSI--------------YLYRETPHFISSLDSTLDPAK 219
Query: 283 RKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECI---VDDFIFM 339
+ + D++ H+ T + + P + +E + D+I +
Sbjct: 220 EYFIDINHLADQIY---------HLLTDKTF---------DPEKQSIEAYYNKISDYILI 261
Query: 340 CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGS 399
CF +GNDF H P + +R I +L+ +Y++ F + DG + + + +I + +
Sbjct: 262 CFLLGNDFNEHFPAINLRNNGITILLDLYREIFGVSQNIIKDG-EINWVNFKKYIFKLAN 320
Query: 400 YEDRIFQKRARLHQRHAERIKREKAQARR 428
E + ++ ++ R +++ E +
Sbjct: 321 NEHQFIKENYKIRDRLSKKFYPETTDEEK 349
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 11/160 (6%)
Query: 543 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
E W+ RYY F+ T ++ V Y L W +YY SW+ Y YHY P
Sbjct: 371 EKHWQYRYYHSLFHIDTDKDTN-ALASVCNNYLMTLQWTFYYYSRDCVSWKHSYQYHYPP 429
Query: 603 FASDL-KDLDQFNISFELGHP-----FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPI 656
DL K++ FN EL P P L V P S + +P N P
Sbjct: 430 LLEDLYKNIPYFNS--ELVIPVDKSIIHPHLLLAYVLPRNSLNLIPNTKISRFLIKNYP- 486
Query: 657 SDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
D Y DF+ RY W+G P ID + +++ K+
Sbjct: 487 -DHYKEDFKFQYAFCRYFWEGHVMFPEIDFQQFSNDINKL 525
>gi|123490419|ref|XP_001325606.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121908508|gb|EAY13383.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 939
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 153/387 (39%), Gaps = 84/387 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGV F RWLAE+YPL + D SKP +D Y+D N II+
Sbjct: 1 MGVTFFTRWLAERYPLAFRQM--------------DDVSKPT-----FDCFYIDFNAIIY 41
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ + FD + + Y+D + +VRP KL+Y+++DG P AK + RS R
Sbjct: 42 FALSYYNPESEGNFDGIITEIIRYLDTIIQIVRPTKLIYLSVDGTPPYAKCVRNRSSRLA 101
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++++ + +FE I G+ FM L L I
Sbjct: 102 GFM----KNQKQDKSQIQFE-------------------IVAGSVFMEKLHQELIKTIEN 138
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
++ D W K I S +VPGE EHKI ++R + + H ++ +D+D I L
Sbjct: 139 KVKTDIAWSTPKFIYSSYHVPGEAEHKITKFIRDSTTQNNFLNDYVHLVFSVDSDTIFLL 198
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L + + +RE K F + +A
Sbjct: 199 LGLNMKYLVTMREA--------KNFTVNEKSSSSA------------------------- 225
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
++ ++I ++EY+ E + I++DFI + F GNDF+P L
Sbjct: 226 -FELIYISIIQEYIMEELKSDRR--------IINDFIALVFLCGNDFIPEFSELPSSPET 276
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSL 387
++ Y K + G +L + ++ L
Sbjct: 277 FESILDCYVKTIKEKGLFLLNENRKFL 303
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 580 WVMHYYYEGVCSWQWFYPY-HYAPFASDLKDL-DQFNISFELGHPFKPFNQLLGVFPSAS 637
+V+ YY+ SW + YPY H PF+ L L + +F L P +PF L P
Sbjct: 359 FVLSYYFGKTPSWSYCYPYEHSPPFSFLLNALKNHKETNFVLDKPLEPFEASLITAPREG 418
Query: 638 SHALPEHYRKLMTDPN-SPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
+P+ L + N + IS ++P + N K L DE + +K I
Sbjct: 419 KSGIPKELIALTLEENQNKISKYFP--HKTISNSKELREIQFPPLAVFDEV-YYETIKII 475
Query: 697 EHTLTEEEARRNSIMADMLFVLLSHPLSASIYTLDEHCKQLKIKERVEVKERLN-PELSD 755
E +E RN + +D+ V+ +H + K++KI E E E +N P L
Sbjct: 476 ED---KECLVRNELQSDI--VITNHGVE----------KEIKILEFPEKSEIVNYPSLKS 520
Query: 756 G 756
G
Sbjct: 521 G 521
>gi|253744666|gb|EET00835.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 1956
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 132/289 (45%), Gaps = 63/289 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLE-YDNLYLDMNGII 59
MGV +RW+ E+YP + + P + + DNLY+D N +I
Sbjct: 1 MGVARLFRWIYERYPFAI--------------------TTPGASFVSRIDNLYIDFNALI 40
Query: 60 HPCFHPEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSR 117
H +D P F E +F + DYI L V+PRK +++A DGVAP AK QQR R
Sbjct: 41 HESIR-KDSYIPFKFTEAMLFGEIADYIQVLVSTVQPRKRIFIATDGVAPDAKTKQQRVR 99
Query: 118 RFRAS-------------KDAADSAAEEERLRQEFEREG----RKLPPKSDSQVFDSNVI 160
R+ S A+ +E E L G R LPP++ I
Sbjct: 100 RYMGSYQKEGSTLYKEKIAGTANVLSEAELLASRHIANGNSDDRSLPPQN-----VKTAI 154
Query: 161 TPGTEFMAVLSIALQYYIHLRLNND-PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLP 219
+PGT FM L L ++ ++++ PGW V +S ++ GEGEHKIM+ ++ + L
Sbjct: 155 SPGTLFMDRLHSFLIAFVAKNVDSEAPGWVHPSVTISGWDMCGEGEHKIMTEIKRIKQLE 214
Query: 220 -----GYDPNTR-----------HCLYGLDADLIMLALATHEVHFSILR 252
G D + + HC+ GLDAD+I+L L H + +LR
Sbjct: 215 EQAAIGVDYSEKSFSEFFPYHESHCICGLDADIILLGLGVHVQNVYLLR 263
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 391
++ DFI + FVGNDFLP +P + I+ G+++ +A+Y++ YL D +++++
Sbjct: 369 LIVDFIILTLFVGNDFLPEVPGMLIKNGSLDNCIAIYRELLA--DTYLLDDLCKNIKKIY 426
Query: 392 H 392
H
Sbjct: 427 H 427
>gi|444523968|gb|ELV13670.1| 5'-3' exoribonuclease 1 [Tupaia chinensis]
Length = 592
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 81/123 (65%), Gaps = 21/123 (17%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP FYRW++E+YP +++V++E +IP E+ NLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-CLSEVVKEH-------QIP-----------EFANLYLDMNGIIH 41
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C HP D + D++F +F Y++ LF +++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRA 121
FR
Sbjct: 102 FRV 104
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 302 YQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
+ LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L I
Sbjct: 112 FHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHD 171
Query: 360 AINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 172 ALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 219
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 588 GVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 647
GV FYPYHYAPF SD++++ I FELG PFKPF QLL V P+AS + LP Y++
Sbjct: 309 GVDIVSEFYPYHYAPFLSDIRNISTLEIHFELGKPFKPFEQLLAVLPAASKNLLPTCYQQ 368
>gi|407849156|gb|EKG03992.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 389
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVL---RYTEGLCWVMHYYYEGVCSWQWFYPYHYAPF 603
+++YYE+KF P +RE K + L Y G WVM YY G SW W+YP++YAP
Sbjct: 24 RDKYYEKKFGW-DPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSWDWYYPFYYAPL 82
Query: 604 ASDLKDL-DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
DL + N+ LG P P QLL V P S ALPE + DP S + FYP
Sbjct: 83 LQDLAHFPGKVNVKMTLGAPRHPVLQLLAVLPRLSVEALPEELHDAVKDPESVLGVFYPE 142
Query: 663 DFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKI 696
+VD + +S+QG+ +LPF++ + L +K+
Sbjct: 143 KVDVDFSEAHFSYQGVLRLPFVNNSHLQSACQKL 176
>gi|350646476|emb|CCD58875.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 1638
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 129/545 (23%), Positives = 210/545 (38%), Gaps = 126/545 (23%)
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 274
+ NL P T Y D +I L THE++ ILRE V A
Sbjct: 47 KENLKDNSPET----YSFDPCVISPGLTTHEINICILRENVVK----------------A 86
Query: 275 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECI 332
NC KP+ ++ LREY+D EF PF DLE +
Sbjct: 87 QNCSAD------------------NKPFCITYLSVLREYIDLEFTELKKTLPFPYDLERL 128
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 392
+DD++FM F +GNDF+PH+P L I ++ + Y+ L GYL + +L R
Sbjct: 129 IDDWVFMAFLLGNDFIPHIPNLHIHAESLLTVWDTYQVVLPKLDGYLVELGYLNLPRFHK 188
Query: 393 FIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSR---F 447
+++ + +E F++R A R R K AR +++E L+ D+ +P +
Sbjct: 189 YLEELSQFERDWFEER-----EAAFRWMRGKQGARMANELEKLGLSSEDNEMPSHKPPSS 243
Query: 448 HGSRLASGPSPSPYQQSECVGRL---------------DN------------GKGTSGRP 480
G R S + + G+L DN G S R
Sbjct: 244 TGKRFPEMNKSSLLDRKDDFGQLTDLIDLFVPQSGCQYDNVMLDEAAELMEEGVVVSLRT 303
Query: 481 H--KVPRLSSGATIGAAIVEAENSFET--DPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
H KV +L + + + I N++ T D ++++ + +E + D++ + + +
Sbjct: 304 HDDKVKQLCNKSDLSNRI-SHNNAYNTMDDNHDHEDNIDDETEEEVEDENVTYVESDTDL 362
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEE-----REETRKDVVLRYTEGLCWVMHYYYEGVCS 591
D+ L + YY K + E T ++ Y L W+++YY+ V
Sbjct: 363 DEDLLVYKMHRRDYYSSKLGIQLDEMSGDLGENSTLMSLIQDYIRMLQWILNYYFLNVAD 422
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W +FY YHYAPF + DL + FE F F + S LP
Sbjct: 423 WDFFYAYHYAPF---VHDLILYTKKFENCQNFNGIKLSWTNFQTNSQPVLP--------- 470
Query: 652 PNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
+PF+D+ L++ +K + LTE+E +RN
Sbjct: 471 ---------------------------FLIPFLDQQLLINAMKDGDTKLTEQEKQRNQHK 503
Query: 712 ADMLF 716
+ + +
Sbjct: 504 SHLFY 508
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 13/71 (18%)
Query: 93 RPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS 152
+PRK ++A+DGVAPRAKM QQR+RRF+ +A E R+ +E ++ ++
Sbjct: 11 KPRKTFFLAVDGVAPRAKMTQQRARRFQ--------SALEGRIAKENLKDN-----SPET 57
Query: 153 QVFDSNVITPG 163
FD VI+PG
Sbjct: 58 YSFDPCVISPG 68
>gi|322511261|gb|ADX06572.1| putative XRN family 5'-3' exonuclease [Organic Lake phycodnavirus]
Length = 467
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 142/317 (44%), Gaps = 91/317 (28%)
Query: 49 DNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPR 108
DNLYLD N II+ D P ++ ++Q + I++ +P++ + DGVAP
Sbjct: 26 DNLYLDANSIIYDQIQKGDEP----YEHIYQAIMTIINKF----QPKQTR-ICFDGVAPL 76
Query: 109 AKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMA 168
AKM QQ+ RR+++ +K+ +S S F++N ITPGT FM
Sbjct: 77 AKMVQQKQRRYKS-------------------HLTKKILNQSSS--FNTNCITPGTLFMN 115
Query: 169 VLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 228
L++ Y+ +L+ND ++LS ++ PGEGE+KI ++R +N H
Sbjct: 116 GLNV----YLKEKLDNDTT-----IVLSGSDEPGEGEYKIFQHIRTCKN-----NQENHI 161
Query: 229 LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEF 288
+YGLDADLIML+L + RE +
Sbjct: 162 IYGLDADLIMLSLLQLPKQIYLYRETKY-------------------------------- 189
Query: 289 DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 348
F ++ ++E DY + +I ++++ F+CFF GNDFL
Sbjct: 190 ---------------FKYLNYIQENQDYLLDVSLLGEQICQSMSIENYCFLCFFCGNDFL 234
Query: 349 PHMPTLEIREGAINLLM 365
PH P++ IR I+ L+
Sbjct: 235 PHFPSINIRNHGIDHLL 251
>gi|260944870|ref|XP_002616733.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
gi|238850382|gb|EEQ39846.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
Length = 483
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 67/99 (67%)
Query: 619 LGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGI 678
LG PF P+ QL+ V P+AS H LPE +R LM+ P+S I DFYP F++DMNG + SWQGI
Sbjct: 87 LGEPFNPYEQLMAVLPAASGHTLPEVFRSLMSHPDSEIIDFYPETFQIDMNGAKMSWQGI 146
Query: 679 AKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLFV 717
A LPFIDE RLL V+ LT++E RN+ LF+
Sbjct: 147 ALLPFIDEKRLLTAVRAKYSLLTDDERERNTNKKAQLFI 185
>gi|238613508|ref|XP_002398460.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
gi|215475037|gb|EEB99390.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
Length = 98
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 72/98 (73%)
Query: 14 YPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIHPCFHPEDRPAPTT 73
YP+V + I+ E + V IP + + PNPNG E+D LYLDMNGI+HPC HPE +PAP T
Sbjct: 1 YPVVEDEEIKVEDENNELVTIPTNMADPNPNGTEFDCLYLDMNGIVHPCTHPEGKPAPET 60
Query: 74 FDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKM 111
+++ +F Y +R+ MVRPRKLL+MAIDGVAPRAKM
Sbjct: 61 EEDMMVEVFKYTERVVNMVRPRKLLFMAIDGVAPRAKM 98
>gi|256077064|ref|XP_002574828.1| 5'-3' exoribonuclease [Schistosoma mansoni]
Length = 1637
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 129/555 (23%), Positives = 209/555 (37%), Gaps = 147/555 (26%)
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 274
+ NL P T Y D +I L THE++ ILRE V A
Sbjct: 47 KENLKDNSPET----YSFDPCVISPGLTTHEINICILRENVVK----------------A 86
Query: 275 ANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECI 332
NC KP+ ++ LREY+D EF PF DLE +
Sbjct: 87 QNCSAD------------------NKPFCITYLSVLREYIDLEFTELKKTLPFPYDLERL 128
Query: 333 VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEH 392
+DD++FM F +GNDF+PH+P L I ++ + Y+ L GYL + +L R
Sbjct: 129 IDDWVFMAFLLGNDFIPHIPNLHIHAESLLTVWDTYQVVLPKLDGYLVELGYLNLPRFHK 188
Query: 393 FIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSR---F 447
+++ + +E F++R A R R K AR +++E L+ D+ +P +
Sbjct: 189 YLEELSQFERDWFEER-----EAAFRWMRGKQGARMANELEKLGLSSEDNEMPSHKPPSS 243
Query: 448 HGSRLASGPSPSPYQQSECVGRL---------------DN------------GKGTSGRP 480
G R S + + G+L DN G S R
Sbjct: 244 TGKRFPEMNKSSLLDRKDDFGQLTDLIDLFVPQSGCQYDNVMLDEAAELMEEGVVVSLRT 303
Query: 481 H--KVPRLSSGATIGAAIVEAENSFET--DPQENKEEFKAKLKELLRDKSDAFNSDNPEE 536
H KV +L + + + I N++ T D ++++ + +E + D++ + + +
Sbjct: 304 HDDKVKQLCNKSDLSNRI-SHNNAYNTMDDNHDHEDNIDDETEEEVEDENVTYVESDTDL 362
Query: 537 DKVKLGEPGWKERYYEEKFNAKTPEE-----REETRKDVVLRYTEGLCWVMHYYYEGVCS 591
D+ L + YY K + E T ++ Y L W+++YY+ V
Sbjct: 363 DEDLLVYKMHRRDYYSSKLGIQLDEMSGDLGENSTLMSLIQDYIRMLQWILNYYFLNVAD 422
Query: 592 WQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTD 651
W +FY YHYAPF DL
Sbjct: 423 WDFFYAYHYAPFVHDLI------------------------------------------- 439
Query: 652 PNSPISDFYPTDFE--VDMNGKRYSWQGIAK--------LPFIDEARLLDEVKKIEHTLT 701
Y FE + NG + SW +PF+D+ L++ +K + LT
Sbjct: 440 -------LYTKKFENCQNFNGIKLSWTNFQTNSQPVFTLIPFLDQQLLINAMKDGDTKLT 492
Query: 702 EEEARRNSIMADMLF 716
E+E +RN + + +
Sbjct: 493 EQEKQRNQHKSHLFY 507
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 13/71 (18%)
Query: 93 RPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDS 152
+PRK ++A+DGVAPRAKM QQR+RRF+ +A E R+ +E ++ ++
Sbjct: 11 KPRKTFFLAVDGVAPRAKMTQQRARRFQ--------SALEGRIAKENLKDN-----SPET 57
Query: 153 QVFDSNVITPG 163
FD VI+PG
Sbjct: 58 YSFDPCVISPG 68
>gi|340055310|emb|CCC49623.1| putative 5'-3' exonuclease XRNC [Trypanosoma vivax Y486]
Length = 871
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 170/418 (40%), Gaps = 101/418 (24%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL ++ +P ++S + D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFASCF---------------LPSNSSP------DTDCLYIDVNGLVY 39
Query: 61 PCFHPEDRPAPTTFDEVFQC----MFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQR 115
+T ++ +FD +D + + +V+PR L+Y+A+DG++P K+ QQR
Sbjct: 40 QAAALVTSGEGSTEGDIGTAITYRLFDLLDDIILRLVQPRSLVYLAVDGISPMGKLAQQR 99
Query: 116 SRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQV-FDSNVITPGTEFMAVLSIAL 174
SRR R D P + V +DSN IT GT FM+ L+ AL
Sbjct: 100 SRRRRRRHD-------------------NNFPSNHNRNVEWDSNSITVGTPFMSTLTYAL 140
Query: 175 QYYIHLRL----------------NNDPG---WEKIKVILSDANVPGEGEHKIMSYVRLQ 215
+Y R N PG + ++ D PGEGE KI +R
Sbjct: 141 HFYCSSRAERINVERLRQYRSTAGGNAPGDTVPVPVTFVVDDVWRPGEGESKIADAIRRF 200
Query: 216 RNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAA 275
R+ P Y+PNT H + D D+ + +L HE +LR V +
Sbjct: 201 RSQPSYNPNTSHVICSSDTDMTVCSLILHEPRMHVLRYVYAAEN--------------VS 246
Query: 276 NCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP--NPPFEIDLECI- 332
+C+G R + GD F I+ RE L + R+P N E+ E +
Sbjct: 247 HCDGSGSRH----NHTGDSWA-----STFFSIFAFREELRIKLRLPPCNDDAEMSAEELE 297
Query: 333 ---------VDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD 381
+ D +F+ GNDFLP + I EG ++ L+ + +F G + D
Sbjct: 298 QRHQRFERALHDVVFVLQLFGNDFLPSLG-CRIEEGFLDNLLDMLATDFITRGRSIVD 354
>gi|219125787|ref|XP_002183154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405429|gb|EEC45372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 151
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 90/147 (61%), Gaps = 26/147 (17%)
Query: 1 MGVPAFYRWLAEKYPLVV--------ADVIEEEPVVIDGVKIPVDTSKPNP---NGL--E 47
MGVP F+RWL+E+YP V+ A+ +E G P + KP+P GL E
Sbjct: 1 MGVPKFFRWLSERYPKVIQRHGCPPNAETTQEH----FGTDPPANMPKPDPLSTCGLAPE 56
Query: 48 YDNLYLDMNGIIHPCFH--------PEDRPAPTTFDEVFQCMFDYIDRLFV-MVRPRKLL 98
D LY+DMNGIIH C H E+ A + DE+F+ + Y+DR+ + +P++L+
Sbjct: 57 IDRLYIDMNGIIHGCSHNNSEAEENGEEGVANISEDEIFRNICYYLDRVVKDIAKPKQLV 116
Query: 99 YMAIDGVAPRAKMNQQRSRRFRASKDA 125
YMAIDGVAPRAK+NQQRSRR+R+ K+
Sbjct: 117 YMAIDGVAPRAKLNQQRSRRYRSGKEG 143
>gi|440796943|gb|ELR18040.1| 5'3' exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1117
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 165/403 (40%), Gaps = 97/403 (24%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEY-DNLYLDMNGII 59
MG+ F +WL + YP V D + P + P +Y D++Y+D+NG I
Sbjct: 1 MGIAGFQKWLEKHYPHCFIPVP-------DAPRRPAPGERAPPAVKDYFDHIYVDLNGYI 53
Query: 60 HPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
H R A +++F +F +D LF + R+ +++AIDG A AK+ QR RR
Sbjct: 54 HTV----GRRA-ANEEQLFTLLFRELDGLFKVCVARQSIFLAIDGPASAAKLITQRKRRL 108
Query: 120 -RASKDAADSAAEEERLRQEFEREGRK-LPPKSDSQV-----FDSNVITPGTEFMAVLSI 172
ASK + A+ + Q E E + P S +V F+ +T GT FM L
Sbjct: 109 GAASKQDRQAKAKAQPQPQVAESEAQTGAPAVSKKRVKKKGEFNLLQVTAGTPFMYRLKN 168
Query: 173 ALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNL---PGYDPNTR--- 226
AL ++ RL +DP + ++ +S +VPGEGE KIM ++ N P +P R
Sbjct: 169 ALCFWACSRLQSDPKYHFTRIYISGPDVPGEGELKIMEFIVSHANADSSPPPNPQERVFA 228
Query: 227 -------------------HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLC 267
H + G DADLI+L L+ S+L+ V Q+
Sbjct: 229 YQTGFADQERNAEKFRRDSHLIVGTDADLILLGLS------SMLQNVFILNTQR------ 276
Query: 268 GQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI 327
GQ L IW L++ F PF
Sbjct: 277 GQSSKL------------------------------LFSIWEFCRSLEHSF-----PFRG 301
Query: 328 DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK 370
DF+ + GND+LP ++R +++ L A YKK
Sbjct: 302 HCNMTRLDFVLISLLQGNDYLP-----KLRGASLDRLWARYKK 339
>gi|291336199|gb|ADD95772.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C195]
Length = 293
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 138/304 (45%), Gaps = 71/304 (23%)
Query: 75 DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRA---SKDAADSAAE 131
+++ QC+ + I ++P + +Y+A DGVAP AKMNQQR+RR + SK
Sbjct: 32 NKLIQCVINTIGIYIEYIQPSETVYIAFDGVAPFAKMNQQRTRRHKGMITSKINNVIGVN 91
Query: 132 EERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKI 191
E +++ + ++ ITPGT FM LS + L G +KI
Sbjct: 92 ENQMK------------------WTTSHITPGTLFMNKLSNRVTKAFG-GLEGHYGVKKI 132
Query: 192 KVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEV--HFS 249
V SD GEGEHK+ YVR ++ +T +YGLD+DLIML+L E+ +
Sbjct: 133 IVSCSDE--AGEGEHKLFQYVRSHKDTF---QDTNMVIYGLDSDLIMLSLFHCEMFKNLY 187
Query: 250 ILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK---PYQFLH 306
I RE TP E G ++ ++ Y ++H
Sbjct: 188 IFRE---TP-------------------------------EFGKGILSEEQCSMDYMYMH 213
Query: 307 IWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMA 366
I +L + E + + D++FMCF +GNDFLPH P+L IR I +L+
Sbjct: 214 IHSLARAILIEMSCDEGQY-----FRLYDYMFMCFLLGNDFLPHFPSLNIRTMGIEVLLD 268
Query: 367 VYKK 370
YKK
Sbjct: 269 NYKK 272
>gi|284504336|ref|YP_003407051.1| XRN1 5'-3' exonuclease [Marseillevirus]
gi|282935774|gb|ADB04089.1| XRN1 5'-3' exonuclease [Marseillevirus]
Length = 490
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 167/446 (37%), Gaps = 130/446 (29%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP + W+ +++ + + EP+ E DNLY+D +H
Sbjct: 1 MGVPGLFYWIQQRHAQHTRTIQKREPI-------------------EVDNLYIDAVCFVH 41
Query: 61 PCF-----HPEDRPAPTTFD---------EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVA 106
C + T+ EVF+ + I L VRP K Y+ DGV+
Sbjct: 42 TCAQDVYGYGNSVSFSETYKNFTEKQKELEVFRLTRNAIFALTKYVRPTKRFYVLFDGVS 101
Query: 107 PRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 166
P AK +QQR RRF S ++ FD N IT GTEF
Sbjct: 102 PVAKQSQQRHRRFLGSP----------------------------TEGFDPNSITCGTEF 133
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
+ LQ Y+ L N EK ++I SD ++ GEGEHK + + R P
Sbjct: 134 LD----RLQGYVRRGLENFCSKEKFELIFSDTSIAGEGEHKALFFARQN------GPEES 183
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
HC Y D DL++LA+ +LR+ Q HL + G ++
Sbjct: 184 HCFYSPDGDLVILAMTLEFPKTFLLRKDHIQ-----------QWRHLLTDISGISQ---- 228
Query: 287 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 346
++E IP + DF+F+ +GND
Sbjct: 229 ----------------------------EFEKEIP-----------IKDFVFLSCLLGND 249
Query: 347 FLPHMPTLEIR-EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
FLP + E + L+A YK+ + L + K + ++ +G++E +F
Sbjct: 250 FLPRLGMFEGKFSDTAEFLLAKYKQ--KGLHIFSRKTGKFLAKNTFKILKFLGTFEKELF 307
Query: 406 QKRA--RLHQRHAERIKREKAQARRG 429
+R L ++ ER+ R A G
Sbjct: 308 DERCYFELTKQKEERVDRTLLSAYDG 333
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 542 GEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA 601
G+ G Y+E+F K ++TR+ Y G WV YY +G W Y Y Y
Sbjct: 333 GKSGVDMDKYKEEFGLKKQRSNQQTRE-----YLRGCLWVTLYYTQGCPDNGWSYKYFYP 387
Query: 602 PFASDLKDLDQFNISFE--LGH-PFKPFNQLLGVFPSASSHALPEHYRKL-MTDPNSPIS 657
PF SD++ D + FE L H F QLL V P SSH LP ++K ++
Sbjct: 388 PFLSDIEQEDLVHEPFEQTLAHNQFSQLLQLLCVLPPHSSHLLPRKWKKYACVYQRKELA 447
Query: 658 DFYPTDFEVDMNGKRYSWQGIAKLPFIDEARL 689
+FYP + EVD GK ++ + LP +D +++
Sbjct: 448 EFYPKEIEVDYEGKFRDYESVPLLPHVDVSKV 479
>gi|402589808|gb|EJW83739.1| hypothetical protein WUBG_05350 [Wuchereria bancrofti]
Length = 1134
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 69/105 (65%)
Query: 612 QFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMNGK 671
+ ++F+L PFKPF QLL V P+AS++ LP YR+LM D SPI DFYP F+ D+NGK
Sbjct: 26 EMEMNFDLNEPFKPFEQLLAVLPAASANCLPPPYRELMNDAKSPIIDFYPEQFDTDLNGK 85
Query: 672 RYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADMLF 716
+ W+ + +PFI+E RLL V + LT+E+ +RN +LF
Sbjct: 86 KNDWEAVILIPFINEDRLLQAVAIKDSLLTDEDRQRNVHGPHLLF 130
>gi|336373302|gb|EGO01640.1| hypothetical protein SERLA73DRAFT_132069 [Serpula lacrymans var.
lacrymans S7.3]
Length = 70
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 60/70 (85%)
Query: 55 MNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGI+HPC HP+++PAP T +E+ +F Y +R+ MVRPRK+L+MAIDGVAPRAKMNQQ
Sbjct: 1 MNGIVHPCTHPDNKPAPETEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKD 124
RSRRFR++++
Sbjct: 61 RSRRFRSAQE 70
>gi|449017059|dbj|BAM80461.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 695
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 155/371 (41%), Gaps = 86/371 (23%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ F RW E +P V V E S P +D++ D+N +IH
Sbjct: 1 MGIAGFQRWYLENFPSTVVTVTGE--------------SAPE----HFDHVLFDLNQLIH 42
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
D+ F +F ++D + + P+K +++A DG AP AK+ Q+ RR
Sbjct: 43 LAAR-----VARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVL 97
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
S+ R R+ R G D ++PGTE M + A+++Y+
Sbjct: 98 ESRKL-------HRTRKRKRRCG-----------VDVLSLSPGTELMQLTLQAVEFYVCS 139
Query: 181 RLNNDPG-WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
RL + ++ ++ ++S VPGEGE KI+ Y+ DP + G DADL++L
Sbjct: 140 RLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRY-----VDPQHSVVVIGSDADLVVL 194
Query: 240 ALATHEV-HFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP 298
LAT +V +F + V TP + + P H G A+++ + +V
Sbjct: 195 GLATQKVRNFFVF---VITP----RANMQDAPEH------GTAQKR------QAISAIV- 234
Query: 299 KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIRE 358
+ +W LD F P +DL + M GND+LP ++R
Sbjct: 235 ------ISVWQWIRVLDRFFPGETPSLRLDL-------VVMLMMQGNDYLP-----KLRG 276
Query: 359 GAINLLMAVYK 369
+ N + YK
Sbjct: 277 TSFNSIWEAYK 287
>gi|407400385|gb|EKF28636.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 1026
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 79/141 (56%), Gaps = 26/141 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL +KYP +V+DVI P + G LY+D+NG+IH
Sbjct: 48 MGVPKFALWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 85
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A +E QC+ ++ L VRP +LY+A DGVAPRAKMNQQR+RR
Sbjct: 86 PCCHSERDPSVAARPEEEKLQCICSEVEVLLATVRPHDILYIATDGVAPRAKMNQQRARR 145
Query: 119 F--RASKDAADSAAEEERLRQ 137
+ RA + +A EE +R+
Sbjct: 146 YMNRAKIMTSGAAIVEEVVRE 166
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRL-NNDPGWEKIKVILSDANVPGEGEHKIMSYVR 213
FDS+ I+PGT FMA ++ A+ + +L N +P W ++V+ S A+ PGEGEHKI+ ++R
Sbjct: 251 FDSSCISPGTAFMAKVTNAILTLVQDKLANGEPLWAGLRVVFSGASTPGEGEHKIIDFLR 310
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
Q + PG++ H + GLDADL+ L+L+ H H ILR+
Sbjct: 311 TQSSYPGFNGKGAHVIVGLDADLVFLSLSLHIPHIFILRD 350
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYY--EGVCSWQWFYPYHYAPF 603
W+E Y A EE +Y EGL +V YY CSW W+YP+H+APF
Sbjct: 619 WREPYLTSTGLAGNLEE-------ACKKYVEGLRFVWRYYSGNASTCSWSWYYPFHHAPF 671
Query: 604 ASDLK------DLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPIS 657
A D+ DL P F QLL + P S LP +M +P +
Sbjct: 672 ALDIADYLQRCDLTNLPPPPLETTPPDMFLQLLCILPPTSHALLPAVLGDVMLNPPEGLR 731
Query: 658 DFYPTDFEVDMN---GKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARR 707
+ +P+ + VD GK Y + + LPF + + L + V+ T++E R
Sbjct: 732 ETFPSMWRVDYTAAYGKDYLAEVL--LPFANVSELCELVESSRPYFTKDEQER 782
>gi|367037641|ref|XP_003649201.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
gi|346996462|gb|AEO62865.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
Length = 120
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 12/111 (10%)
Query: 53 LDMNGIIHPCFH--PEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAK 110
LDMNGIIH C H +D + +E+F +F+YI+ LF ++P+KL +MA+DGVAPRAK
Sbjct: 1 LDMNGIIHNCTHKDSDDVHFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDGVAPRAK 60
Query: 111 MNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVIT 161
MNQQR+RRFR + DA ER R++ REG++LP + + FDSN IT
Sbjct: 61 MNQQRARRFRTALDA-------ERAREKAIREGKELPKE---EPFDSNCIT 101
>gi|406601834|emb|CCH46557.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 491
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 133/307 (43%), Gaps = 80/307 (26%)
Query: 45 GLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDG 104
G + DNLY+DMN I H C D + F ++ + + P KLLY+AIDG
Sbjct: 22 GKQCDNLYIDMNCIFHICLR--DAKSEKDFKDLILAHLQMVTAAYC---PHKLLYIAIDG 76
Query: 105 VAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGT 164
V P K+ Q RR Q + + G + P N +TPGT
Sbjct: 77 VPPLGKLKGQALRR------------------QSYIKSGNGIDP---------NALTPGT 109
Query: 165 EFMAVLSIALQYYIHLRLNNDPGWE-KIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDP 223
EFM +LS Q+ ++ P +KVI+SD+NVPGEGE KI++++R Q D
Sbjct: 110 EFMNMLS---QFITKCTGSHLPKLSSNVKVIISDSNVPGEGEFKIVNHIREQ------DI 160
Query: 224 NTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKR 283
+ + +YG+DADLI L+L+ +Q + FL Q K KR
Sbjct: 161 DMKVVIYGIDADLIALSLSL----------------KQRQVFLARQ----------KYKR 194
Query: 284 KAGEFDEKGDE-VVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFF 342
+ E ++V +FL ++ + ++ I+ D + +
Sbjct: 195 GVTTSRSRQCEYLIVSSLKNKFLEPYSNEQ-----------KSSLNTTNILKDIVLLLIL 243
Query: 343 VGNDFLP 349
+GNDFLP
Sbjct: 244 LGNDFLP 250
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 530 NSDNPEEDKVK-LGEPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEG 588
N++ EE+ VK L + E + ++ + E+ +E +++ +Y +GL WV+ YY
Sbjct: 333 NTEKDEEENVKKLAQMECFEEHKKKVYEQNLCEKYDEL--ELIKQYYKGLHWVLRYYLGK 390
Query: 589 VCSWQWFYPYHYAPFASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRK 647
S+ + YPY APF SDL ++Q ++ F P +QL V P SS LP Y++
Sbjct: 391 CPSYDYVYPYDNAPFLSDLVKVNQ-DVEFVNTEPINALHQLALVIPKKSSILLPSRYKE 448
>gi|147771604|emb|CAN69283.1| hypothetical protein VITISV_028678 [Vitis vinifera]
Length = 79
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 3/68 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVPAFYRWLA++Y L V DV+EEEP DG +I D S+PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYHLAVMDVVEEEPSE-DGAEI--DVSRPNPNGMEFDNLYLDMNGIIH 57
Query: 61 PCFHPEDR 68
PCFHP+ +
Sbjct: 58 PCFHPDGK 65
>gi|328869830|gb|EGG18205.1| hypothetical protein DFA_03692 [Dictyostelium fasciculatum]
Length = 1061
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 550 YYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL-- 607
YY+ K A T E E ++ V Y GL WV+ YY G W+W Y +HYAP A+DL
Sbjct: 814 YYKLKLQAST-SEVENVKQWVCQSYVRGLSWVLKYYTVGCPDWKWSYNFHYAPLAADLAA 872
Query: 608 --KDL-------DQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISD 658
K++ D +I F+LG P +P LL V P S LP LM + +S
Sbjct: 873 YCKEMVVGKGFKDTSHIEFKLGAPLQPLAHLLSVLPVYSGKFLPAPLADLM--KSKQLST 930
Query: 659 FYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEE---ARRNSIMADML 715
FY + +D+NG+ SW+G+ + FID + L I L++ + A+ N + D+
Sbjct: 931 FYRERYRIDLNGEEVSWKGVVLVNFIDVSALESLANPIAEQLSKNDPHIAQLNKLGNDIY 990
Query: 716 FV---LLSHPLSASIYTLDEHCKQ 736
++ S P S I+ LD+ K+
Sbjct: 991 YLQGDAQSSPDSYKIF-LDQQKKE 1013
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 37/151 (24%)
Query: 1 MGVPAFYRWLAEKYPLVV-------------------ADVIEEEPVVIDGVKIPVDTSKP 41
MG+PAFYRWL +KYP + + P+ ID P
Sbjct: 1 MGIPAFYRWLVDKYPKSIQYFQQQQQVEEQQEQDEVSSSSTTTTPLKID----------P 50
Query: 42 NPNGLEYDNLYLDMNGIIHPCFHPEDRPA--------PTTFDEVFQCMFDYIDRLFVMVR 93
N ++++NLY+DMNG+IH H + P+ P T D + + +F ++ + V
Sbjct: 51 RCNNVKFNNLYIDMNGVIHNSTHAKGEPSVESIMASKPNTDDTIKENIFKRLNDIIVTTN 110
Query: 94 PRKLLYMAIDGVAPRAKMNQQRSRRFRASKD 124
P L+Y+A+DGV PRAK +QR RRFR++KD
Sbjct: 111 PSDLVYIALDGVPPRAKATEQRRRRFRSAKD 141
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 153 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 212
+VFDSN I+P TEFM ++ + YI L + V+LSD VPGEGEHKIM ++
Sbjct: 213 KVFDSNSISPATEFMNKVNHWIGEYISTVLAKSH--PHLAVVLSDTTVPGEGEHKIMDFI 270
Query: 213 RLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGH 272
R N + +T H YG+DADLI L L+ H F +LR+ C +C H
Sbjct: 271 R--GNHKNWSESTSHIFYGMDADLIFLGLSVHLQRFFVLRDF---QSLSYGCSICKSEYH 325
Query: 273 LAANCEGK-AKRKAGEFDEKGD 293
++ C+ A +K +++GD
Sbjct: 326 MSYECKSALAMKKLHASNKEGD 347
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 293 DEVVVPKKPYQFLHIWTLREYLDY--EFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPH 350
DE + ++ ++F+++ LR+Y+ Y F + N ++D+ ++D MC +GNDFLPH
Sbjct: 630 DEYLTVERKFEFVNLDNLRQYIKYYLTFGLENES-QLDINNCINDITVMCMLMGNDFLPH 688
Query: 351 MPTLEIREGAINLLMAVYK----KEFRALG--GYLTDGSKPSLRRVEHFIQAVGSYEDRI 404
+P + I++G+I L++ YK ++ G YLT + + +G++E I
Sbjct: 689 LPAVSIKDGSIELILGWYKDWIHNSIKSTGKVNYLTVDTNIIYSNFSELLNVLGNWESVI 748
Query: 405 F-QKRARLHQRHAERI 419
+ K R+ ++ R+
Sbjct: 749 YPDKLERMGKKDLARL 764
>gi|71665017|ref|XP_819483.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70884786|gb|EAN97632.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 880
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 159/411 (38%), Gaps = 106/411 (25%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL ++ P + P D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFA----------PCFLSSSSCPA-----------ADCLYIDVNGLVY 39
Query: 61 PCFHPEDRPAPTTFD---EVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
+ D + + +FD +D + + +VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAAALATASEASAVDIDAAILRKLFDILDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR R S + E +DSN I+ GT FM+ L+ AL +
Sbjct: 100 RRRRRSGGGSRGRNAVE---------------------WDSNSISVGTPFMSRLTEALHF 138
Query: 177 YIHLRL-----------------NNDPGWEK----IKVILSDANVPGEGEHKIMSYVRLQ 215
Y R N G + I I+ D PGEGE KI +R
Sbjct: 139 YCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRRF 198
Query: 216 RNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAA 275
R+ YDPNT H + D D+ + +L HE +LR + C H
Sbjct: 199 RSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLR------------YECSPSHHSGG 246
Query: 276 NCEGKAKRKAGEF-DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP------------- 321
G +G + ++ GD F I RE L + R+
Sbjct: 247 ASRGG---DSGSWRNQVGDAWA-----STFFSIHAFREELRNKLRLQTSRKDSAEEAERR 298
Query: 322 NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF 372
N FE L D +F+ GNDFLP + I EG ++ L+ + +F
Sbjct: 299 NRQFERALH----DVVFVLLLFGNDFLPSV-GCRIEEGFLDDLLELLATDF 344
>gi|407400381|gb|EKF28633.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 243
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 77/141 (54%), Gaps = 26/141 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL +KYP +V+DVI P D LY+D+NG+IH
Sbjct: 95 MGVPKFALWLTKKYPEMVSDVI------------PADVH----------GLYIDLNGLIH 132
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P+ +E QC+ ++ L VRP + Y+A DGVAPRAKMNQQR+RR
Sbjct: 133 PCCHSERDPSVAARPEEEKLQCICSEVEVLLATVRPHDIFYIATDGVAPRAKMNQQRARR 192
Query: 119 F--RASKDAADSAAEEERLRQ 137
+ RA + +A EE +R+
Sbjct: 193 YMNRAKIMTSGAAIVEEVVRE 213
>gi|402576527|gb|EJW70485.1| hypothetical protein WUBG_18607 [Wuchereria bancrofti]
Length = 81
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 58/80 (72%)
Query: 80 CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEF 139
+F+YIDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFRASK+A + + +R
Sbjct: 2 LIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEAIEKVEQIAEIRSRL 61
Query: 140 EREGRKLPPKSDSQVFDSNV 159
E EG LPP+ + + V
Sbjct: 62 ESEGYPLPPEKKPSISTATV 81
>gi|342182575|emb|CCC92054.1| putative exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 867
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 159/426 (37%), Gaps = 104/426 (24%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL ++ P+ L D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLRRRFSSCFL---------------------PSNTVLSTDCLYIDVNGLVY 39
Query: 61 PCFHPEDRPAPTTFD---EVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
D + Q +FD +D + + +VRPR L+Y+A+DGV+P K++QQRS
Sbjct: 40 QAAALVTSGGVDCTDIDAAIIQRVFDLLDDIVLKLVRPRSLVYLAVDGVSPMGKLSQQRS 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR R + S A +DSN I+ GT FM+ L+ AL +
Sbjct: 100 RRRRRRRQDPHSQAHGTE--------------------WDSNSISVGTSFMSSLANALHF 139
Query: 177 YIHLRLNN----------------DPGWE-------KIKVILSDANVPGEGEHKIMSYVR 213
Y R D G I ++ PGEGE KI +R
Sbjct: 140 YCVSRTEQVNVERLREHRRRSRPVDIGSSLTEEQPPLITFVVDGVWRPGEGECKITDAIR 199
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHL 273
R+ P YDPNT H + D D+ + +L HE H +LR P
Sbjct: 200 RFRSQPNYDPNTSHVICSSDTDMTVCSLILHEPHIHVLRYE-------------HAPRGT 246
Query: 274 AANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEID----- 328
+ R AG+ F I RE L R+ D
Sbjct: 247 SKGVSDGWTRSAGD-----------SWASTFFSINAFREELRSRLRLERCANNTDTAGGV 295
Query: 329 ------LECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDG 382
E + D +F+ GNDFLP + I EG ++ L+ + +F G + D
Sbjct: 296 ERCDRLFESALHDVVFVLLLFGNDFLPSVGC-RIEEGFLDSLLEMLATDFVTRGLSIVDP 354
Query: 383 SKPSLR 388
+ +++
Sbjct: 355 TTNTIQ 360
>gi|261328233|emb|CBH11210.1| 5'-3' exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 1036
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRLN-NDPGWEKIKVILSDANVPGEGEHKIMSYVR 213
FDSN I+PGT+FMA +S A+ ++ +++ NDP W ++ VI S +N PGEGEHKI+ ++R
Sbjct: 226 FDSNCISPGTDFMAKVSDAVLNMLNEKMSGNDPTWTRLCVIFSGSNTPGEGEHKIIDFLR 285
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTP 258
Q +L + H + GLDADLI LAL+ H ILR+ P
Sbjct: 286 TQSSLAQFGGKANHVIVGLDADLIFLALSLHITQVFILRDTTRNP 330
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 24/121 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL KYP +V +K P+ + LY+D+NGIIH
Sbjct: 1 MGVPKFASWLRNKYPAIV--------------------TKNCPSSVH--GLYIDLNGIIH 38
Query: 61 PCFHPEDRPAPTTF--DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H + A +E +C+ ++ L V+P++++Y+A+DGVAPRAKMNQQR+RR
Sbjct: 39 PCCHNDSDTAIALLPEEEKLECICSELELLVQTVQPKEVMYIAVDGVAPRAKMNQQRARR 98
Query: 119 F 119
+
Sbjct: 99 Y 99
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDG-SKPSLRRV 390
I+DD I + +GNDFLPH P+ E A++ L+ +Y E G+LT G + +L ++
Sbjct: 510 IIDDIIVLSILLGNDFLPHAPSAFSGESALDNLLELYVSEVLPY-GFLTKGPHEINLPQL 568
Query: 391 EHFIQAVGSYEDRIFQKRARLHQRHAERIKREKAQARRGDDVEPLAQPDSLVPV 444
+ +A E F +R L + + A+ R+G + + + D V +
Sbjct: 569 QRLFEAYAKIEAVKF-RRFLLFKSTNKENSNSGAEFRKGSNNDNVTVADVAVAL 621
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLRYTEGLC--WVMHYYYEGVCSWQWFYPYHYAPF 603
W++ Y + + + +E E +Y EG+C W + W W+YP+++AP
Sbjct: 629 WRDTYLKSTGLSNSVQEACE-------KYVEGVCFVWRYYTTTTTDSDWSWYYPFYHAPP 681
Query: 604 ASDL------KDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP--NSP 655
DL ++ + + P QLL + P S LP ++M +
Sbjct: 682 VIDLAIYLKEANIKRMPLPVVKSTPPDTLVQLLSILPPTSHALLPMVLGEVMVRSPQQAE 741
Query: 656 ISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEHTLTEEEARRNSIMADML 715
+ +P + VD + LPF D L V LTEEE R + D
Sbjct: 742 LESTFPLQWNVDYHDSNVVHLATVMLPFADMDVLQQVVDAAWPQLTEEERWRTQKL-DFH 800
Query: 716 FVLLSHPLS 724
V+ S+ S
Sbjct: 801 LVITSNKTS 809
>gi|407838780|gb|EKG00159.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 1070
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 24/132 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL +KYP +V+DVI P + G LY+D+NG+IH
Sbjct: 92 MGVPKFASWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 129
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A +E QC+ ++ L +VRP +LY+A DGVAPRAKMNQQR+RR
Sbjct: 130 PCCHSERDPSVAARPEEEKLQCICCEVEVLLAIVRPHDILYIATDGVAPRAKMNQQRARR 189
Query: 119 FRASKDAADSAA 130
+ + S
Sbjct: 190 YMSRAKIMSSGT 201
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRL-NNDPGWEKIKVILSDANVPGEGEHKIMSYVR 213
FDSN I+PGT FM + A+ + +L N DP W ++V+ S AN PGEGEHKI+ ++R
Sbjct: 295 FDSNCISPGTAFMVKVKNAILTMVQDKLANGDPLWAGLRVVFSGANTPGEGEHKIIDFLR 354
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
Q + PG++ H + GLDADLI L L+ H H +LR+
Sbjct: 355 TQSSYPGFNGKGAHVIAGLDADLIFLLLSLHIPHILLLRD 394
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 573 RYTEGLCWVMHYYY--EGVCSWQWFYPYHYAPFASDLK------DLDQFNISFELGHPFK 624
+Y EGL +V YY CSW W YP+H+APFA D+ DL P
Sbjct: 683 KYVEGLRFVWRYYSGNASTCSWSWHYPFHHAPFALDIADYLQRCDLTNLPPPPLETTPPD 742
Query: 625 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN---GKRYSWQGIAKL 681
F QLL + P S LP +M +P + + +P+ + VD GK Y + + L
Sbjct: 743 MFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVL--L 800
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARR 707
PF + + L + V+ T+EE R
Sbjct: 801 PFANVSELRELVESSRPYFTKEEQER 826
>gi|407868229|gb|EKG08789.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 879
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 158/410 (38%), Gaps = 104/410 (25%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL ++ P + P D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFA----------PCFLSSSSCPA-----------ADCLYIDVNGLVY 39
Query: 61 PCFHPEDRPAPTTFD---EVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
+ D + + +FD ID + + +VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAAALATASEASAVDIDAAILRKLFDIIDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR R S + E +DSN I+ GT FM+ L+ AL +
Sbjct: 100 RRRRRSGGGSRGRNAVE---------------------WDSNSISVGTPFMSRLTEALHF 138
Query: 177 YIHLRL-----------------NNDPGWEK----IKVILSDANVPGEGEHKIMSYVRLQ 215
Y R N G + I I+ D PGEGE KI +R
Sbjct: 139 YCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRRF 198
Query: 216 RNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAA 275
R+ YDPNT H + D D+ + +L HE +LR + C P H
Sbjct: 199 RSQSTYDPNTSHIICSSDTDVTVCSLILHEPRIHVLR------------YEC-SPSH--- 242
Query: 276 NCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP-------------N 322
G + G+ ++ V F I R L + R+ N
Sbjct: 243 --HGGGASRGGDSGSWRNQ-VGDAWASTFFSIHAFRGELRNKLRLQTSRKDSAEEAERRN 299
Query: 323 PPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEF 372
FE L D +F+ GNDFLP + I EG ++ L+ + +F
Sbjct: 300 RQFERALH----DVVFVLLLFGNDFLPSVGC-RIEEGFLDDLLELLATDF 344
>gi|71407725|ref|XP_806311.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70870021|gb|EAN84460.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 979
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 24/123 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL +KYP +V+DVI P + G LY+D+NG+IH
Sbjct: 1 MGVPKFASWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 38
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A +E QC+ ++ L VRP +LY+A DGVAPRAKMNQQR+RR
Sbjct: 39 PCCHSERDPSVAARPEEEKLQCICCEVEVLLATVRPHDILYIATDGVAPRAKMNQQRARR 98
Query: 119 FRA 121
+ +
Sbjct: 99 YMS 101
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRLNN-DPGWEKIKVILSDANVPGEGEHKIMSYVR 213
FDSN I+PGT FM ++ A+ + +L N DP W ++V+ S AN PGEGEHKI+ ++R
Sbjct: 204 FDSNCISPGTAFMVKVTNAILTMVQDKLTNGDPLWAGLRVVFSGANTPGEGEHKIVDFLR 263
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
Q + PG++ H + GLDADLI L+L+ H H +LR+
Sbjct: 264 TQSSYPGFNGKGAHVIAGLDADLIFLSLSLHIPHILLLRD 303
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 573 RYTEGLCWVMHYYY--EGVCSWQWFYPYHYAPFASDLKD-LDQFNISFELGHPFKP---- 625
+Y EGL +V YY CSW W+YP+H+APFA D+ D L + +++ P +
Sbjct: 592 KYVEGLRFVWRYYSGNASTCSWSWYYPFHHAPFALDIADYLQRCDLTNLPSPPLETTPPD 651
Query: 626 -FNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN---GKRYSWQGIAKL 681
F QLL + P S LP +M +P + + +P+ + VD GK Y + + L
Sbjct: 652 MFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVL--L 709
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARR 707
PF + + L + V+ T+EE R
Sbjct: 710 PFANVSELRELVESSRPYFTKEEQER 735
>gi|71425179|ref|XP_813034.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70877881|gb|EAN91183.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 1068
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 71/132 (53%), Gaps = 24/132 (18%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL +KYP +V+DVI P + G LY+D+NG+IH
Sbjct: 90 MGVPKFASWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 127
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A +E QC+ ++ L VRP +LY+A DGVAPRAKMNQQR+RR
Sbjct: 128 PCCHSERDPSVAARPEEEKLQCICFKVEVLLATVRPHDILYIATDGVAPRAKMNQQRARR 187
Query: 119 FRASKDAADSAA 130
+ + S
Sbjct: 188 YMSRAKIVSSGT 199
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRL-NNDPGWEKIKVILSDANVPGEGEHKIMSYVR 213
FDSN I+PGT FM ++ A+ + +L N DP W ++V+ S AN PGEGEHKI+ ++R
Sbjct: 293 FDSNCISPGTAFMVKVTNAILTMVQDKLANGDPLWAGLRVVFSGANTPGEGEHKIVDFLR 352
Query: 214 LQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
Q + PG++ H + GLDADLI L+L+ H H +LR+
Sbjct: 353 TQSSYPGFNGKGAHVIAGLDADLIFLSLSLHIPHILLLRD 392
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 573 RYTEGLCWVMHYYY--EGVCSWQWFYPYHYAPFASDLK------DLDQFNISFELGHPFK 624
+Y EGL +V YY CSW W YP+H+APFA D+ DL P
Sbjct: 681 KYVEGLRFVWRYYSGNASTCSWSWHYPFHHAPFALDIADYLQRCDLTNLPPPPLETTPPD 740
Query: 625 PFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVDMN---GKRYSWQGIAKL 681
F QLL + P S LP +M +P + + +P+ + VD GK Y + + L
Sbjct: 741 MFLQLLCILPPTSHALLPAVLGDVMLNPPEELRETFPSMWRVDYTAAYGKDYLAEVL--L 798
Query: 682 PFIDEARLLDEVKKIEHTLTEEEARR 707
PF + + L + V+ T+EE R
Sbjct: 799 PFANVSALREVVESSRPYFTKEEQER 824
>gi|407394522|gb|EKF26964.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi marinkellei]
Length = 367
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 155/399 (38%), Gaps = 108/399 (27%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL ++ P + P D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRF----------APCFLSSSSCPA-----------ADCLYIDVNGLVY 39
Query: 61 PCFHPEDRPAPTTFD---EVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
+ D + + +FD +D + + +VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAAALATASEASAVDIDAAILRKLFDILDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR R S + E +DSN I+ GT FM+ L+ AL +
Sbjct: 100 RRRRRSGGGSRGRNAVE---------------------WDSNSISVGTPFMSRLTEALHF 138
Query: 177 YI----------------------HLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 214
Y + R +DP I I+ D PGEGE KI +R
Sbjct: 139 YCASRAERMNGERLRDELQQAARGNTRGGDDPV-TPITFIVDDVWRPGEGESKIADAIRR 197
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLA 274
R+ P YDPNT H + D D+ + +L HE +LR + C H
Sbjct: 198 FRSQPTYDPNTSHIICSSDTDVTVCSLILHEPRIHVLR------------YECSPSHHSG 245
Query: 275 ANCEGKAKRKAGEF-DEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIP------------ 321
G +G + ++ GD F I+ RE L + R+
Sbjct: 246 GASRGG---DSGSWRNQVGDAWA-----STFFSIYAFREALRNKLRLQTSRKDSTEEVER 297
Query: 322 -NPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREG 359
N FE L D +F+ GNDFLP + I EG
Sbjct: 298 RNRQFERALH----DVVFVLLLFGNDFLPSV-GCRIEEG 331
>gi|327409880|ref|YP_004347300.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
gi|326785054|gb|AEA07188.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
Length = 495
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 159/424 (37%), Gaps = 128/424 (30%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP + W+ +++ ++ + + V DNLY+D +H
Sbjct: 11 MGVPGLFYWIQQRHSRYTKNIQKGQNTV--------------------DNLYVDAVCFVH 50
Query: 61 PCF-----HPEDRPAPTTF---------DEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVA 106
C + ++ TF E+F+ + + I RL V P K Y+ DGVA
Sbjct: 51 TCAQDIYGYGKNISLSDTFKDMTEKQKEQELFRSVRNAIFRLTKYVTPTKKFYVVFDGVA 110
Query: 107 PRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEF 166
P AK NQQR RRF K + FD N IT GTEF
Sbjct: 111 PIAKQNQQRHRRFLGGKPSCG---------------------------FDPNSITCGTEF 143
Query: 167 MAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTR 226
+ LQ Y+ L+N EK ++ S ++ GEGEHK +++ R N
Sbjct: 144 LD----RLQRYVERGLSNFCQKEKFDLVFSSSSEAGEGEHKALAFARNNGN------GES 193
Query: 227 HCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAG 286
HC Y D DL++L +A S+LR QD Q +L + G ++
Sbjct: 194 HCFYSPDGDLVLLTMALGFDKVSLLR--------QDH---IQQWKYLLTDISGLSQ---- 238
Query: 287 EFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGND 346
EF + VP K + F L C+ +GND
Sbjct: 239 EFQKD-----VPIKDFVF------------------------LSCL----------LGND 259
Query: 347 FLPHMPTLEIR-EGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIF 405
FLP + E + L+A YK+ R + T P+ R + ++E +F
Sbjct: 260 FLPRLGMFESKFSDTAEFLIAKYKEHGRRIFSEKTGNFIPA--RAFGLFSFLSTFEKELF 317
Query: 406 QKRA 409
KR
Sbjct: 318 DKRC 321
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 551 YEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDL 610
Y+E F +K ++RE+++ Y G WV YY+ G W Y +HY PF SD+K
Sbjct: 352 YKEIFGSK--KQREDSQ---AFDYIRGCIWVTVYYFRGCPDNGWSYKWHYPPFLSDIK-- 404
Query: 611 DQFNISFELGHPFK------PFNQLLGVFPSASSHALPEHYRKL-MTDPNSPISDFYPTD 663
F PFK QLL V P S LP +RK +S+F+P +
Sbjct: 405 ---KEHFTGQKPFKQSVVPNQLLQLLCVLPPHSMDLLPRRWRKYGGITKREELSEFFPKE 461
Query: 664 FEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIE 697
E+D GK ++ + LP +D A + E++KI+
Sbjct: 462 VEIDYEGKFRDYENVPLLPHVDVALIQREIQKIQ 495
>gi|322510814|gb|ADX06128.1| putative XRNA family 5'-3' exonuclease [Organic Lake phycodnavirus
1]
Length = 465
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 133/327 (40%), Gaps = 96/327 (29%)
Query: 44 NGLEYDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAID 103
N + NLYLD N II+ + E ++ V+ + + + +LF P+K ++ D
Sbjct: 21 NNIVCHNLYLDANSIIYEHLNKEG----NIYEHVYHSILN-LQKLF---SPKKT-FICFD 71
Query: 104 GVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPG 163
GVAP AKM QQ+ RR+++ + D+N ITPG
Sbjct: 72 GVAPLAKMVQQKQRRYKSLLTNTILGTQS-----------------------DTNKITPG 108
Query: 164 TEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDP 223
T FM L+ +LR D ILS + PGEGE+KI ++R +
Sbjct: 109 TLFMNELNT------YLRDKMDT-----HTILSGTDEPGEGENKIFHFMRRE------SE 151
Query: 224 NTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKR 283
+ H +YGLDADLIML+L + RE + N K
Sbjct: 152 DEHHIIYGLDADLIMLSLLQQNYKIFLYRETKYFE---------------YLNYINKKYD 196
Query: 284 KAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFV 343
+ D G ++ E +D V+++ F+CF
Sbjct: 197 YILDIDLLGKQIC---------------EIVD-----------------VEEYCFLCFLC 224
Query: 344 GNDFLPHMPTLEIREGAINLLMAVYKK 370
GNDFLPH P++ IR G I ++ +KK
Sbjct: 225 GNDFLPHFPSINIRNGGIEYILHHHKK 251
>gi|72392625|ref|XP_847113.1| 5'-3' exonuclease XRNC [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176006|gb|AAX70128.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei]
gi|70803143|gb|AAZ13047.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 868
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 160/424 (37%), Gaps = 110/424 (25%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL ++ P+ + + D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLRRRFAACFL---------------------PSNSNVSADCLYIDVNGLVY 39
Query: 61 PCFHPEDRPAPTTFD---EVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
D + + +FD +D + + +VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAATLATSGGGDPADIEAAILRRLFDLLDDIVLRLVRPRSLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR R + S + +DSN I+ GT FM+ L+ AL +
Sbjct: 100 RRRRRRRQDPHSHVR--------------------TTEWDSNSISVGTSFMSSLTDALHF 139
Query: 177 YIHLRLN--------------------------NDPGWEKIKVILSDANV--PGEGEHKI 208
Y R N+ + +SD NV PGEGE KI
Sbjct: 140 YCASRAERINVERLREYKQRDVGKDVASAGFPANEKAAPSLITFVSD-NVWRPGEGESKI 198
Query: 209 MSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCG 268
+R R+ P YDPNT H + D D+ + +L HE + +LR
Sbjct: 199 ADAIRRFRSQPSYDPNTAHVICSSDTDVTVCSLILHEPNIHVLRYE-------------- 244
Query: 269 QPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----- 323
H++A+ + GD F I+ RE L RI
Sbjct: 245 ---HVSASTAKGGNNNWQTY--AGDSWA-----STFFSIYAFREELRLRLRIEQTRSNTM 294
Query: 324 ------PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGG 377
E + D +F+ GNDFLP + I EG ++ L+ + +F G
Sbjct: 295 SAEELEKLNKQFEAALHDVVFVLLLFGNDFLPSVG-CRIEEGFLDSLLEMLATDFVTRGR 353
Query: 378 YLTD 381
+ D
Sbjct: 354 SIVD 357
>gi|83317922|ref|XP_731370.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491393|gb|EAA22935.1| very similar to mouse Dhm1 and Dhm2-related [Plasmodium yoelii
yoelii]
Length = 387
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 543 EPGWKERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAP 602
E +K YY KF +E ++ +V +Y EGL W +HYY+ G SW W YPYHYAP
Sbjct: 264 EKKYKSYYYFHKFGVSDSKEIQQ----IVKKYIEGLFWNLHYYHFGCASWHWEYPYHYAP 319
Query: 603 FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPT 662
SDL ++ + FE G P+ + L+ V P + LP+ Y+ + + + F+P
Sbjct: 320 LCSDLLSFEKSDFFFEKGKPYSAYTHLISVLPQKDKNLLPDPYKNVYAE--DEVKSFFPD 377
Query: 663 DFEVDMNGKR 672
+ ++D NGK+
Sbjct: 378 NVKIDPNGKK 387
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 62/246 (25%)
Query: 224 NTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKR 283
N HC+YGLDADLIML+L TH + ILR+ + + + ++
Sbjct: 10 NWNHCIYGLDADLIMLSLVTHLNNIFILRDKFKLTNDSIHNNVVDNIEKMQSEFNVNSES 69
Query: 284 KAGEFDEKGDEVVVP----------------------------------KKPYQFLHIWT 309
+GE D EV + K +++ H +
Sbjct: 70 DSGEVDSSEREVTINSESKNITINSESKEIDKSEENKNMANNESLNNCFNKTHKYTHDYY 129
Query: 310 LR--EYLDYEFRI------------------------PNPPFEIDLECIVDDFIFMCFFV 343
L E Y+F I N F I+ +VDD +F+ F V
Sbjct: 130 LHYDELNSYDFEILDIYKLRSSIKTQIATYINKLKKEKNIIFSINR--VVDDIVFLSFLV 187
Query: 344 GNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDR 403
GNDFLPH+P ++I EG++N + Y Y+T K + R++ ++ + E +
Sbjct: 188 GNDFLPHIPNIDINEGSMNEIFNSYIFYIYKYSNYITYKDKVHIERLKIVLKILSGQEFQ 247
Query: 404 IFQKRA 409
F+KR
Sbjct: 248 YFKKRG 253
>gi|261330307|emb|CBH13291.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei gambiense
DAL972]
Length = 960
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 160/424 (37%), Gaps = 110/424 (25%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL ++ P+ + + D LY+D+NG+++
Sbjct: 93 MGVPLLLTWLRRRFAACFL---------------------PSNSNVSADCLYIDVNGLVY 131
Query: 61 PCFHPEDRPAPTTFD---EVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
D + + +FD +D + + +VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 132 QAATLATSGGGDPADIEAAILRRLFDLLDDIVLRLVRPRSLVYLAVDGISPMGKLAQQRS 191
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR R + S + +DSN I+ GT FM+ L+ AL +
Sbjct: 192 RRRRRRRQDPHSHVR--------------------TTEWDSNSISVGTSFMSSLTDALHF 231
Query: 177 YIHLRLN--------------------------NDPGWEKIKVILSDANV--PGEGEHKI 208
Y R N+ + +SD NV PGEGE KI
Sbjct: 232 YCASRAERINVERLREYKQRDVGKDVASAGFPANEKAAPSLITFVSD-NVWRPGEGESKI 290
Query: 209 MSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCG 268
+R R+ P YDPNT H + D D+ + +L HE + +LR
Sbjct: 291 ADAIRRFRSQPNYDPNTAHVICSSDTDVTVCSLILHEPNIHVLRY--------------- 335
Query: 269 QPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP----- 323
H++A+ + GD F I+ RE L RI
Sbjct: 336 --EHVSASTAKGGNNNWQTY--AGDSWA-----STFFSIYAFREELRLRLRIEQTCSNTM 386
Query: 324 ------PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGG 377
E + D +F+ GNDFLP + I EG ++ L+ + +F G
Sbjct: 387 SAEELEKLNKQFEAALHDVVFVLLLFGNDFLPSVG-CRIEEGFLDSLLEMLATDFVTRGR 445
Query: 378 YLTD 381
+ D
Sbjct: 446 SIVD 449
>gi|145552344|ref|XP_001461848.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429684|emb|CAK94475.1| unnamed protein product [Paramecium tetraurelia]
Length = 920
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 18/156 (11%)
Query: 547 KERYYEEKFNAKTPEERE-ETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFAS 605
++ YY+ K EE + + +D+ + Y EG+ +V+ YY++GV SW+W+Y Y+YAP
Sbjct: 25 RKLYYKAKCQITQGEELDLQKLEDMCINYMEGIYFVLQYYFKGVPSWEWYYHYYYAPLCG 84
Query: 606 D-----------LKDLDQFNISFELGHPFKPFNQLL-GVFPSASSHALPEHYRKLMTDPN 653
D L D +Q I F P+ PF QLL + ++ LPE Y KL+TD
Sbjct: 85 DIVGVVSQIVQQLSDQEQ-PIIFTKDKPYPPFKQLLPSILTPENAMLLPEPYGKLLTDKE 143
Query: 654 SPI----SDFYPTDFEVDMNGKRYSWQGIAKLPFID 685
+ I D+YP FE D G Y Q I K+PF+D
Sbjct: 144 NSILRTPIDYYPESFETDSYGTMYEHQHITKIPFLD 179
>gi|157867636|ref|XP_001682372.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68125825|emb|CAJ03874.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1164
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 24/124 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WLA KYP +V D S P + LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLARKYPSMVMD------------------SCPG----DVHGLYIDLNGLIH 38
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A T +E + + I+ L V VRP++++Y+AIDGV PRAKMNQQR+RR
Sbjct: 39 PCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQRVIYIAIDGVVPRAKMNQQRARR 98
Query: 119 FRAS 122
+ +S
Sbjct: 99 YMSS 102
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 23/134 (17%)
Query: 143 GRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL---NNDPG------------ 187
GR+ + FDSN I+PGT FM ++ A++ YI +L ND G
Sbjct: 205 GRQPAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKLAPKENDAGGKAEAEAGASPA 264
Query: 188 --------WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
W + VI SD+N GEGEHKI ++R Q PG++ + H + GLDADLI L
Sbjct: 265 AITATCAHWAGLTVIFSDSNTAGEGEHKISDFLRTQSAFPGFNGSGCHVIAGLDADLIFL 324
Query: 240 ALATHEVHFSILRE 253
+L+ H ILR+
Sbjct: 325 SLSLHIPRVVILRD 338
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGV--CSWQWFYPYHYAP 602
W++ Y +T R+E R Y EG+ +V YY SW W+YP+H+AP
Sbjct: 670 WRDVYV------RTTSLRDEAGAQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAP 723
Query: 603 FASDLKDL-----DQFNISFEL----GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
A D+ D Q + P PF QLL + P S +P+ R M P
Sbjct: 724 LALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPPPSRQLVPDALRATMASPP 783
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAK--LPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
+ ++D +P + VD G Y + LPF D RL + V T TE E +RN++
Sbjct: 784 AELADTFPHRWVVDRTGA-YGKDHLVTVLLPFADVLRLQELVAAASGTYTEAEQQRNALR 842
Query: 712 ADML 715
+ L
Sbjct: 843 SGHL 846
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 314 LDYEFRIPNPPF----EIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYK 369
LD + P PPF I+DDFI + +GNDFLPH+P++ E A++ LM VY
Sbjct: 546 LDGRPKAPLPPFHPCTSTSNSKIIDDFIALGVLLGNDFLPHLPSVYCGESAMDTLMDVYV 605
Query: 370 KEFRALGGYLTDG 382
+ GYLT G
Sbjct: 606 RAVLPY-GYLTGG 617
>gi|222636726|gb|EEE66858.1| hypothetical protein OsJ_23653 [Oryza sativa Japonica Group]
Length = 628
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGV AFYRWLA++YP V+D +EEEPV ++ G +PVD +PNPNGL++DNLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLKFDNLYLDMNGII 60
Query: 60 HPCFHPEDR-----PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
HPCFHPE P P+ F Q + I P G A + +Q
Sbjct: 61 HPCFHPEGHARSYSPIPSVFSSSNQPILCSISPWIWTPSPAAGTDHLRRGAALKGNFVEQ 120
Query: 115 RSRRFRASKDAADSAAEEERLRQEF 139
R K AA + +L +
Sbjct: 121 DECVARNFKQAAKLLGLDSKLEKNL 145
>gi|115471315|ref|NP_001059256.1| Os07g0238700 [Oryza sativa Japonica Group]
gi|113610792|dbj|BAF21170.1| Os07g0238700 [Oryza sativa Japonica Group]
gi|215695346|dbj|BAG90537.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715337|dbj|BAG95088.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 182
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGV AFYRWLA++YP V+D +EEEPV ++ G +PVD +PNPNGL++DNLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLKFDNLYLDMNGII 60
Query: 60 HPCFHPEDR-----PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
HPCFHPE P P+ F Q + I P G A + +Q
Sbjct: 61 HPCFHPEGHARSYSPIPSVFSSSNQPILCSISPWIWTPSPAAGTDHLRRGAALKGNFVEQ 120
Query: 115 RSRRFRASKDAADSAAEEERLRQEF 139
R K AA + +L +
Sbjct: 121 DECVARNFKQAAKLLGLDSKLEKNL 145
>gi|451927289|gb|AGF85167.1| hypothetical protein glt_00358 [Moumouvirus goulette]
Length = 785
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 157/691 (22%), Positives = 268/691 (38%), Gaps = 155/691 (22%)
Query: 67 DRPAPTTFDEVFQCMFD--YIDRLFVMV---------------RPRKLLYMAIDGVAPRA 109
++ +P ++FQ F Y+DRL + + + L +AIDGV +
Sbjct: 92 NKTSPIDIIKLFQDHFTDKYMDRLIITLVINTVLSLVRTFCENKTISTLLIAIDGVPSKG 151
Query: 110 KMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSD--------SQVFDSNVIT 161
KM +Q+ RR+ A EE ++ F + L + D S + N IT
Sbjct: 152 KMVEQKQRRYLG-------AITEEYKQKIFGKYKNYLLKQPDYIYLSTKNSIKWSRNKIT 204
Query: 162 PGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGY 221
PGT FM L LQ ++ + +++I+SD GEGE KI++YV Y
Sbjct: 205 PGTAFMHKLVAHLQ-SDKIQQSFKTNRSNLEIIISDMYEVGEGEKKIVNYVN------KY 257
Query: 222 DPNTRHC--LYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFL--CGQPGHLAANC 277
PNT +Y DAD+I+L C L + L N
Sbjct: 258 LPNTNESVMIYSPDADVILL------------------------CMLLPVNKLYMLRYND 293
Query: 278 EGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP----FEIDLECIV 333
+ K +D + I +L+ + Y I N P + D++ I
Sbjct: 294 QSSVKNNRNTYD--------------LIDIKSLKSNISY--YINNHPDYSEEKFDVDNIN 337
Query: 334 DDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKE--FRALGGYLTDGSKPSLRRVE 391
D + + GNDF+P + TL +++G N+L A K FR YL + SK +
Sbjct: 338 YDIVCISTLFGNDFVPKIETLNVKKGFQNILDAYLKTLIIFREKNNYLVNPSKNKFKLNF 397
Query: 392 HFIQAVGSY---EDRIFQKRARLHQRH----------------AERIKREKAQ-ARRGDD 431
+F++ V E+ F K L+ ++ +E IK Q R +
Sbjct: 398 NFLKQVFFNLIPEEDDFIKHNDLYNKYITVGQIKNVFDYVEITSENIKPIYDQFTREYGE 457
Query: 432 VEPLAQPDSLVPVSRFHGSRL---ASGPSPSPYQQSECVGR--LDNG------KGTSGRP 480
++ L + + + F + L + S + +CV L N K +
Sbjct: 458 LKNLIKNNG--NFTYFETNDLFMNSLKKSVLVFMDGQCVNTSYLSNREMIKLLKNYYRKY 515
Query: 481 HKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA---KLKELLRDKSDAFNSDNPEED 537
H+ PRL+ + ++ + ++N E++ + ++L + N+
Sbjct: 516 HEFPRLNINLNTWSHSIDDYIHKKVVREKNYNEYQKEVYRFDKMLDEYYIKLNAQPINLS 575
Query: 538 KVKLGEPGWKERYYEEKFNAKTPEERE---ETRKDVVLRYTEGLCWVMHYYYEGVCSW-Q 593
K K+ + YY F ++ + + V+ Y EGL WV +YY+ +
Sbjct: 576 KNKIND------YYMNYFGITLYDKSKNLSDQANSVMQDYIEGLLWVFNYYFNDTSYINR 629
Query: 594 WFYPYHYAP----------------FASDLKDLDQFNISFELGHPFKPFNQLLGVFPSAS 637
W+Y + AP F + L+ L ++N++ L + F P QL+ V P +
Sbjct: 630 WYYQHERAPLLRHLHMFLETIDEKYFKNILEGLSEYNVT-NLKNYFNPVEQLMYVSPMTT 688
Query: 638 S--HALPEHYRK-LMTDPNSPISDFYPTDFE 665
LP +Y+K +++D P Y D E
Sbjct: 689 DIIKLLPSNYKKYILSDNMDPFLKTYFIDIE 719
>gi|384246301|gb|EIE19792.1| hypothetical protein COCSUDRAFT_58521 [Coccomyxa subellipsoidea
C-169]
Length = 852
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 111/253 (43%), Gaps = 53/253 (20%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGV F W +++P GVK YD+LY+DM +H
Sbjct: 1 MGVKGFNTWFRKQFPGAYV-----------GVK------------RHYDHLYIDMASYLH 37
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
E+ D + + +D+ +V P+K + A+DG AP AK+ QR RR
Sbjct: 38 -----EELRRANDVDHFHKLLHARLDKTLRLVEPQKSVVFALDGPAPLAKLLTQRLRR-- 90
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
++E ++E KS ++ S +TPGT MA++ +L YYI
Sbjct: 91 ---------------KKEAQKEA-----KSGPRLLSSLGLTPGTPLMAMIQESLTYYICR 130
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
RL W+ + LS A V GEGE KI+S RL R P H + D+D++++A
Sbjct: 131 RLQTS-AWQHLHFELSGATVKGEGEVKILS--RLLRPWADVQPEDTHVVIANDSDVVLMA 187
Query: 241 LATHEVHFSILRE 253
L T + +L E
Sbjct: 188 LVTPARNVFVLAE 200
>gi|398013576|ref|XP_003859980.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
gi|322498198|emb|CBZ33273.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
Length = 486
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 24/124 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL KYP +V D S P + LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLTRKYPSMVMD------------------SCPG----DVHGLYIDLNGLIH 38
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A T E + + I+ L V VRP+ ++Y+A+DGV PRAKMNQQR+RR
Sbjct: 39 PCCHDEHDPSVALRTQGEKLRSICLAIETLVVTVRPQHVIYIAVDGVVPRAKMNQQRARR 98
Query: 119 FRAS 122
+ +S
Sbjct: 99 YMSS 102
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 23/134 (17%)
Query: 143 GRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL----NNDPG----------- 187
GR+ + FDSN I+PGT FM ++ A++ YI +L N+D G
Sbjct: 205 GRQPAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGASPA 264
Query: 188 --------WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
W + VI SD+N GEGEHKI ++R Q PG++ + H + GLDADLI L
Sbjct: 265 AINATCAHWAGLTVIFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFL 324
Query: 240 ALATHEVHFSILRE 253
+L+ H ILR+
Sbjct: 325 SLSLHIPRVVILRD 338
>gi|154422101|ref|XP_001584063.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918308|gb|EAY23077.1| hypothetical protein TVAG_183130 [Trichomonas vaginalis G3]
Length = 859
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 160/388 (41%), Gaps = 91/388 (23%)
Query: 48 YDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAP 107
Y+ LY+D + ++ + T +E F D L +++P L+Y+A++G P
Sbjct: 29 YNCLYIDASTLLVAAISIKSSKLNTLNEENITFAFHLFDSLVHLLQPTDLIYIALEGSQP 88
Query: 108 RAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFM 167
+K +R ++ R + + DS N+ P
Sbjct: 89 ISKTYATHNRFYQ-----------------------RNMIEQHDSI---RNLFQPH---- 118
Query: 168 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 227
L+ +I ++ ND W++ KVI + + VPGE E KI Y+R + N P +D N RH
Sbjct: 119 ------LKSWIQEKIKNDDIWKRPKVIFAGSAVPGEAETKIFDYIRQEMNKPDWDLNKRH 172
Query: 228 CLYGLDADLIMLALATHEVHFSILRE---VVFTPGQQDKCFLCGQPGHLAANCEGKAKRK 284
C++ D+DLI++ L +H +F ++ + G + F P L
Sbjct: 173 CIFTPDSDLILMTLRSHIQNFDLIYQNYRFNLVRGTRTPNFPIT-PSSLTV--------- 222
Query: 285 AGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVG 344
+ I LREYL +F I + E I DDF+ +C +G
Sbjct: 223 --------------------ISINILREYLKLDFEIAD-------EQIFDDFVTICDILG 255
Query: 345 NDFLPHMPTLEIREGAINL----LMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSY 400
+D+ + E +NL L+ YK E ++TD + ++ F+ + +
Sbjct: 256 SDYCAPL------EDVVNLDLESLIQSYKSEPHC--NFITDCDNFNFDNLKIFLNKILKH 307
Query: 401 EDRIFQKRARLHQRHAERIKREKAQARR 428
I ++++ + ++ E+ ++ + R+
Sbjct: 308 ---IAERKSTTYTKYVEKQRKNYFETRK 332
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 547 KERYYEEKFNAKTPEEREETRKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYA-PFAS 605
++ Y+E + TPEE E+ V+ + L +++ Y G+ SW W Y YH+A P
Sbjct: 324 RKNYFETR--KVTPEETEKISHCVL----DSLLYIVKSYAIGIPSWSWVYQYHFAPPLCV 377
Query: 606 DLKDLDQFNISFELGHPFKPFNQLLGVFPSASSHALPEHYRKLMTDP 652
L ++ F P L+ SS + P + TDP
Sbjct: 378 VLDYIETFKSQLVQDEPTNLLQSLMVSLKGISSLSPPYFVQLRETDP 424
>gi|401418979|ref|XP_003873980.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490213|emb|CBZ25474.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1161
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 24/124 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL KYP +V D P D LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLTRKYPSMVMD------------SCPGDV----------HGLYIDLNGLIH 38
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A T +E + + I+ L V VRP++++Y+AIDGV PRAK+NQQR+RR
Sbjct: 39 PCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQRVIYIAIDGVVPRAKLNQQRARR 98
Query: 119 FRAS 122
+ +S
Sbjct: 99 YMSS 102
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 143 GRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL---NNDPG------------ 187
GR+ + FDSN I+PGT FM ++ A++ YI +L +D G
Sbjct: 206 GRQPAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKLAPKESDGGGEAVAEAGASPA 265
Query: 188 -----WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALA 242
W + V+ SD+N GEGEHKI ++R Q PG++ + H + GLDADLI L+L+
Sbjct: 266 ATCAHWAGLTVVFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLS 325
Query: 243 THEVHFSILRE 253
H ILR+
Sbjct: 326 LHIPRVVILRD 336
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGV--CSWQWFYPYHYAP 602
W++ Y +T R+E R Y EG+ +V YY SW W+YP+H+AP
Sbjct: 667 WRDVYV------RTTSLRDEAGAQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAP 720
Query: 603 FASDLKDL-----DQFNISFEL----GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
A D+ D Q + P PF QLL + PS S +P+ R M P
Sbjct: 721 LALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPSPSCQLVPDALRATMASPP 780
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAK--LPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
+ ++D +P + VD G Y +A LPF + RL + V T TE E +RN++
Sbjct: 781 AELADTFPRRWVVDRTGA-YGKDHLATALLPFANVPRLQELVAAASGTYTEAEQQRNALR 839
Query: 712 ADML 715
+ L
Sbjct: 840 SGHL 843
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGS-KPSLRRV 390
I+DDFI + +GNDFLPH+P++ E A++ LM VY + GYLT G + L ++
Sbjct: 565 IIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPY-GYLTGGEYEIQLLQL 623
Query: 391 EHFIQAVGSYEDRIFQK 407
E +A + E F++
Sbjct: 624 ERLFRAYAAVEAARFRQ 640
>gi|401422387|ref|XP_003875681.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491920|emb|CBZ27193.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1070
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 131/295 (44%), Gaps = 70/295 (23%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL +++ AD +P D++ + DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRF----ADCF-----------MPADSAVTDYIRRSTDNLFIDLNSFLY 45
Query: 61 PC------------FHPEDRPAPTTFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAP 107
FH D D V + +FD +D L + +V+P+ L+Y+A+DGV+P
Sbjct: 46 QAATIITATHRTHRFHSVDE----VEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSP 101
Query: 108 RAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFM 167
KM+QQR+RR R ++ + ++ E P + + ++DSN I+ GT FM
Sbjct: 102 LGKMSQQRARRRRGARRQSSASPSSSFRHHE--------PAGNINDLWDSNCISVGTRFM 153
Query: 168 AVLSIALQYYIHLRLN-------------------------NDPGWEK-----IKVILSD 197
A ++ AL +Y R D E I +I+ D
Sbjct: 154 AKVTEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSTGESYVFPFISIIVDD 213
Query: 198 ANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
PGEGE+KI ++R R P Y PNT H + D D+ + +L HE +LR
Sbjct: 214 VLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLR 268
>gi|146083592|ref|XP_001464783.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|134068877|emb|CAM59811.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1158
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 24/124 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL KYP +V D P D LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLTRKYPSMVMD------------SCPGDV----------HGLYIDLNGLIH 38
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A T +E + + I+ L V VRP+ ++Y+A+DGV PRAKMNQQR+RR
Sbjct: 39 PCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQHVIYIAVDGVVPRAKMNQQRARR 98
Query: 119 FRAS 122
+ +S
Sbjct: 99 YMSS 102
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 23/134 (17%)
Query: 143 GRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRL----NNDPG----------- 187
GR+ + FDSN I+PGT FM ++ A++ YI +L N+D G
Sbjct: 205 GRQPAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGASPA 264
Query: 188 --------WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIML 239
W + VI SD+N GEGEHKI ++R Q PG++ + H + GLDADLI L
Sbjct: 265 AINATCAHWAGLTVIFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFL 324
Query: 240 ALATHEVHFSILRE 253
+L+ H ILR+
Sbjct: 325 SLSLHIPRVVILRD 338
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGV--CSWQWFYPYHYAP 602
W++ Y +T R+E R Y EG+ +V YY SW W+YP+H+AP
Sbjct: 664 WRDVYL------RTTSLRDEAGSQAACRSYVEGMRFVWRYYSSISLQVSWAWYYPFHHAP 717
Query: 603 FASDLKDL-----DQFNISFEL----GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
A D+ D Q + P PF QLL + P S +P+ R M P
Sbjct: 718 LALDIADFLRAQGPQVQTTLAAPKLEWQPPSPFCQLLCILPPPSRQLVPDALRATMASPP 777
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAK--LPFIDEARLLDEVKKIEHTLTEEEARRNSIM 711
+ ++D +P + VD G Y +A LPF + +RL + V T TE E +RN++
Sbjct: 778 AELADTFPHRWVVDRTGA-YGKDHLATVLLPFANVSRLQELVAAASGTYTEAEQQRNALR 836
Query: 712 ADML 715
+ L
Sbjct: 837 SGHL 840
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDG 382
I+DDFI + +GNDFLPH+P++ E A++ LM VY + GYLT G
Sbjct: 562 IIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPY-GYLTGG 611
>gi|167377817|ref|XP_001734556.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903893|gb|EDR29284.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 201
Score = 92.4 bits (228), Expect = 8e-16, Method: Composition-based stats.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 581 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFN--ISFELGHPFKPFNQLLGVFPSASS 638
V +YY+ + SW+W+Y +HYAPFA D N ISF P P QLL V P S
Sbjct: 1 VFNYYFNKLPSWRWYYKFHYAPFALDFALYLNENDSISFSSDTPILPLEQLLSVLPPHSF 60
Query: 639 HALPEHYRKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLDEVKKIEH 698
+ +P + PNSPI ++ T F++D+NG+ ++GI LP ID L V +E
Sbjct: 61 NNIPSKLAHFVLSPNSPILHYFNTSFKIDINGENKLYKGIPLLPNIDIDLLHSFVFDLEL 120
Query: 699 TLTEEEARRNSIMA-DMLFVL--LSHPLSASIYTL 730
+L + +RN ++ ++L+V S PL + I +L
Sbjct: 121 SLPPSDFKRNILLPFNILYVTKNSSLPLFSKIQSL 155
>gi|302814256|ref|XP_002988812.1| hypothetical protein SELMODRAFT_427492 [Selaginella moellendorffii]
gi|300143383|gb|EFJ10074.1| hypothetical protein SELMODRAFT_427492 [Selaginella moellendorffii]
Length = 298
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 162/381 (42%), Gaps = 102/381 (26%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F+ WL K+P V D I DG K N L YD
Sbjct: 1 MGVPGFFAWLVSKHPRCVRDAI-------DGAK---------NNILRYD----------- 33
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR-F 119
TF +Q D + +L MV P KL+++A+DG P K+ + ++
Sbjct: 34 ------------TFATFYQEFLDSLRKLVAMVAPTKLVFLALDGRPPTPKLFSKLFKKPC 81
Query: 120 RASKDAADSAAEEERLRQEFER--EGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYY 177
R ++DA+ S+ + + G +P +++ ++ GT FM L L+ +
Sbjct: 82 RYNRDASLSSLSSSEDELDSTKGQTGDLIPRNRKAKM---AMVRHGTPFMNRLESELRRF 138
Query: 178 I---HLRLNND------PGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHC 228
+ L ++D +++ I+S + GEGE KI +++ R LP ++ + HC
Sbjct: 139 VASMMLSSSDDHRRRRSMTSSRLQWIVSTSEEDGEGELKIFNHI---RALP-FNAHDFHC 194
Query: 229 LYGLDADLIMLALAT-HEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGE 287
+ G DADLIMLALA+ +I+R+ TP
Sbjct: 195 VVGRDADLIMLALASPLSRKINIVRQ---TP----------------------------- 222
Query: 288 FDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDF 347
D V++ Y+ + I TL D+E ++ P + L + D +F+CF +GNDF
Sbjct: 223 ----KDGVMI----YKLISIETLVR--DFEVQMEEPC-SVRLRSTMRDLVFLCFLLGNDF 271
Query: 348 LPHMPTLEIREGAINLLMAVY 368
LP + L IR I+ L Y
Sbjct: 272 LPGLEALTIRNNGIDKLQQTY 292
>gi|194385576|dbj|BAG65165.1| unnamed protein product [Homo sapiens]
Length = 249
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 33/173 (19%)
Query: 238 MLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVV 297
ML L +HE HFS+LRE V G+ K V
Sbjct: 1 MLGLTSHEAHFSLLREEVRFGGK------------------------------KTQRVCA 30
Query: 298 PKKP-YQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTL 354
P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L
Sbjct: 31 PEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL 90
Query: 355 EIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
I A+ LL Y LGGY+ + +L R E ++ + ++ F +
Sbjct: 91 HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSE 143
>gi|125557787|gb|EAZ03323.1| hypothetical protein OsI_25466 [Oryza sativa Indica Group]
Length = 205
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVID-GVKIPVDTSKPNPNGLEYDNLYLDMNGII 59
MGV AFYRWLA++YP V+D +EEEPV ++ G +PVD +PNPNGL++ NLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGSFVPVDLRRPNPNGLKFYNLYLDMNGII 60
Query: 60 HPCFHPEDR-----PAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ 114
HPCFHPE P P+ F Q + I P G A + +Q
Sbjct: 61 HPCFHPEGHARSYSPIPSVFSSSNQPILCSISPWIWTPSPAAGTDHLRRGAALKGNFVEQ 120
Query: 115 RSRRFRASKDAADSAAEEERLRQEF 139
R K AA + +L +
Sbjct: 121 DECVARNFKQAAKLLGLDSKLEKNL 145
>gi|355729455|gb|AES09873.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 74
Score = 90.9 bits (224), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 52/70 (74%)
Query: 174 LQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLD 233
L+Y+++++++ D W+ + + S PGEGEHKIM ++R ++ P +DPNTRHCLYGLD
Sbjct: 5 LKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLD 64
Query: 234 ADLIMLALAT 243
ADLIML L +
Sbjct: 65 ADLIMLGLTS 74
>gi|339898255|ref|XP_003392512.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
gi|321399477|emb|CBZ08676.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
Length = 1068
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 62/291 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL +++ AD +P D++ + DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRF----ADCF-----------MPADSAVTDYIRESTDNLFIDLNSFLY 45
Query: 61 ------PCFHPEDR--PAPTTFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKM 111
H R D V + +FD +D L + +V+P+ L+Y+A+DGV+P KM
Sbjct: 46 QAATIITATHRSLRFNSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKM 105
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
+QQR+RR R ++ +++ E P + + ++DSN I+ GT FMA ++
Sbjct: 106 SQQRARRRRGARRQPSASSSSPSRHHE--------PAGNINDLWDSNCISVGTRFMAKVT 157
Query: 172 IALQYYIHLRLNNDPGW----EKIKVILSDANV--------------------------P 201
AL +Y R E++++ +DA+V P
Sbjct: 158 EALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSAGAPYVFPFLSIIVDDVLRP 217
Query: 202 GEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
GEGE+KI ++R R P Y PNT H + D D+ + +L HE +LR
Sbjct: 218 GEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLR 268
>gi|425701568|gb|AFX92730.1| putative 5'-3' exonuclease 20 [Megavirus courdo11]
Length = 782
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 151/644 (23%), Positives = 254/644 (39%), Gaps = 131/644 (20%)
Query: 98 LYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP-----PKSDS 152
L +AIDGV + KM +Q+ RR+ + A + + + + +E+++ K P DS
Sbjct: 140 LLIAIDGVPSKGKMVEQKQRRYLS----AITESYKSNILREYKKYLLKQPDYTYLATKDS 195
Query: 153 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 212
++ N ITPGT FM L LQ ++ + +++I+SD GEGE KI++YV
Sbjct: 196 IKWNRNKITPGTAFMHKLVSYLQS-DKIQKSFTTNRSNLEIIISDMYETGEGEKKIVNYV 254
Query: 213 RLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGH 272
N YD + +Y DAD+I+L + +LR QQ G
Sbjct: 255 ----NKYLYDTKSSVMIYSPDADVILLCMLLPVSKLYMLRH-----NQQ----FSG---- 297
Query: 273 LAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP------FE 326
+ Y + I +L+ + Y I N P FE
Sbjct: 298 --------------------------RNSYDLIDIKSLKNNISY--YINNHPDYSRENFE 329
Query: 327 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK--EFRALGGYLTDGSK 384
ID I D + + GNDF+P + TL +++G N++ A K + R YL SK
Sbjct: 330 ID--NINYDIVCLSTLFGNDFVPKIETLNVKKGFQNIMDAYLKTLIKLRDKENYLVTKSK 387
Query: 385 PS-LRRVEHFIQAVGSY--EDRIFQKRARLHQRHAE-----------RIKREKAQ----- 425
+ E Q + + E+ F K L+ ++ I E +
Sbjct: 388 TGYMLNFEFLKQIINNLLPEENDFIKHNNLYNKYITIGQIKNVFNYVEITSENLKGVYDI 447
Query: 426 -ARRGDDVEPLAQPDSLVPVSRFHGSRL---ASGPSPSPYQQSECVGR--LDNG------ 473
R D++ L + + + F + L + S + +CV L N
Sbjct: 448 FTREYGDLKNLIKNNG--NFTYFETNDLFMNSLKKSVLVFMDGQCVNTSYLSNKEMIKLL 505
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA---KLKELLRDKSDAFN 530
+ + + PRL+ + ++ + ++N E++ K + +L D N
Sbjct: 506 RTYYIKYREFPRLNINLNTWSHSIDDYKHKKIVREKNMNEYQKEVYKFEHMLDDYYVKLN 565
Query: 531 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR---KDVVLRYTEGLCWVMHYYYE 587
++ K K+ + +Y + F K ++ + +V+ Y EG+ WV YY+
Sbjct: 566 AEPLNLSKNKIDD------FYMDYFGVKLYDKSKNLSSEANNVMKDYIEGMLWVFDYYFN 619
Query: 588 GVCSW-QWFYPYHYAPFASD----LKDL--DQFNISF---------ELGHPFKPFNQLLG 631
+W+Y + AP + LK++ +QF F +L F P QL+
Sbjct: 620 DTTYINRWYYQHERAPLLNHLYIYLKNINKNQFQNIFDNLPKYRVTDLKKYFNPVEQLMY 679
Query: 632 VFPSASS--HALPEHYRKLMTDPNSPISDFYPTDF-EVDMNGKR 672
V P LP +Y+K M N I F T F ++D KR
Sbjct: 680 VSPMTPDIIKLLPSNYKKYMLSNN--IDPFLKTYFVDIDEVAKR 721
>gi|398015544|ref|XP_003860961.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
gi|322499185|emb|CBZ34256.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
Length = 1068
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 62/291 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL +++ AD +P D++ + DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRF----ADCF-----------MPADSAVTDYIRESTDNLFIDLNSFLY 45
Query: 61 ------PCFHPEDR--PAPTTFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKM 111
H R D V + +FD +D L + +V+P+ L+Y+A+DGV+P KM
Sbjct: 46 QAATIITATHRSLRFDSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKM 105
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
+QQR+RR R ++ +++ E P + + ++DSN I+ GT FMA ++
Sbjct: 106 SQQRARRRRGARRQPSASSSSPSRHHE--------PAGNINDLWDSNCISVGTRFMAKVT 157
Query: 172 IALQYYIHLRLNNDPGW----EKIKVILSDANV--------------------------P 201
AL +Y R E++++ +DA+V P
Sbjct: 158 EALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSAGAPYVFPFLSIIVDDVLRP 217
Query: 202 GEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
GEGE+KI ++R R P Y PNT H + D D+ + +L HE +LR
Sbjct: 218 GEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLR 268
>gi|342181047|emb|CCC90525.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 244
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 64/121 (52%), Gaps = 24/121 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL KYP + SK P+ LY+D+NGIIH
Sbjct: 1 MGVPRFTSWLRNKYPATI--------------------SKGGPSTAH--GLYVDLNGIIH 38
Query: 61 PCFHPE--DRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H + A +E C+ +D L +V+P +LY+AIDGVAPRAKMNQQR+RR
Sbjct: 39 PCCHSDFDSTIALLPEEEKLSCICSELDLLVKIVKPTDVLYIAIDGVAPRAKMNQQRARR 98
Query: 119 F 119
+
Sbjct: 99 Y 99
>gi|389600932|ref|XP_001563893.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504577|emb|CAM37939.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1108
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 68/124 (54%), Gaps = 24/124 (19%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP F WL +KYP +V + P D LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLRKKYPSMVM------------ARCPGDV----------HGLYIDLNGLIH 38
Query: 61 PCFHPEDRP--APTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A T + + + I+ L V VRP+ LLY+AIDGVAPRAKMNQQR RR
Sbjct: 39 PCCHNEHDPSVALRTEEGKLRSICLAIETLVVTVRPQHLLYIAIDGVAPRAKMNQQRLRR 98
Query: 119 FRAS 122
+ ++
Sbjct: 99 YMSA 102
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 26/139 (18%)
Query: 141 REGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHLRLN---NDPG---------- 187
+ GR+ + FDSN I+PGT FM ++ A++ YIH +L ND G
Sbjct: 203 QAGRQPTACAPPARFDSNCISPGTVFMDAVAAAVRDYIHRKLAPKANDGGDSAEVEAGSS 262
Query: 188 -------------WEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDA 234
W + V+ SD+N GEGEHK++ ++R Q PG++ + H + GLDA
Sbjct: 263 PSSSTTINAPCAHWAGLTVVFSDSNTAGEGEHKLVDFLRTQSAFPGFNGSGCHVIAGLDA 322
Query: 235 DLIMLALATHEVHFSILRE 253
DLI L+L+ H ILR+
Sbjct: 323 DLIFLSLSLHIPRVVILRD 341
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 546 WKERYYEEKFNAKTPEEREETRKDVVLR-YTEGLCWVMHYYYEGV--CSWQWFYPYHYAP 602
W++ Y +T R+E R Y EGL +V YY +W W+YP+++AP
Sbjct: 623 WRDVY------VRTTSLRDEAGTQAACRSYVEGLQFVWRYYSSVSLQVNWAWYYPFYHAP 676
Query: 603 FASDLKD--------LDQFNISFEL-GHPFKPFNQLLGVFPSASSHALPEHYRKLMTDPN 653
A D+ D + + EL G P PF QLL + P S +PE R MT P
Sbjct: 677 LALDIADFLRAQGPQVQTTLAALELEGQPPSPFCQLLCILPPPSRQLVPEALRAAMTSPP 736
Query: 654 SPISDFYPTDFEVDMNGKRYSWQGIAK--LPFIDEARLLDEVKKIEHTLTEEEARRNSI 710
+ + D +P + VD G Y +A LPF + L V T EE +RN++
Sbjct: 737 AELVDTFPHRWVVDRTGA-YGKDHLAAVLLPFANLPPLQGLVAAASGIYTAEEKQRNTL 794
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 332 IVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTD-GSKPSLRRV 390
IVDDFI + +GNDFLPH+P++ E A++ LM VY + GYLT + L ++
Sbjct: 521 IVDDFIVLGMLLGNDFLPHLPSVYCGESAMDTLMDVYTRAVLPY-GYLTGVKCEIQLAQL 579
Query: 391 EHFIQAVGSYEDRIFQKRA 409
E ++A + E F++ A
Sbjct: 580 ERLLRAYAAVEAVRFRQFA 598
>gi|284066759|gb|ADB77651.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 2 JKM-2010]
Length = 221
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 12/217 (5%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 464
+ R R+K +K + + +E A + + +P ++ + S PSP P +
Sbjct: 61 QNEIRFKARMKAQKKRKK----MESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVPNARQ 116
Query: 465 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 522
E + G T+ V + A + + ++EA + ++D ++ E +
Sbjct: 117 ESINMRRAGMHTATDGSVVRSNHDAAAALKSMLIEAPSKLNDSDISDSSEASTPSQSPQV 176
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
+ K D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRKHDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|123493433|ref|XP_001326289.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909201|gb|EAY14066.1| hypothetical protein TVAG_478910 [Trichomonas vaginalis G3]
Length = 868
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 169/394 (42%), Gaps = 98/394 (24%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+ F L +YPL++ + E IP P N L D L + GI
Sbjct: 1 MGIYTFRGQLTNRYPLILKSLSE----------IPY----PKYNCLFIDASLLIVKGI-R 45
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
E R A + +F+ I L V+P L+++A DG AK RR+
Sbjct: 46 SGVQTELRTANV------RQLFNNIVHL---VQPSDLIFIAFDGPFSNAKQYTVLRRRY- 95
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
AD + +P ++ +Q+F+ + L+ +I
Sbjct: 96 -----AD----------------KSMPIEAWNQIFEDD---------------LKRWIEE 119
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+N D W+K +VI S + VPGE E KI ++R + + P +DPN RHC+ D+DLI+++
Sbjct: 120 LINFDEYWQKPRVIFSGSKVPGEAETKIFDFLRQEIHKPEWDPNKRHCIVTNDSDLILMS 179
Query: 241 LATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK 300
L +H + I ++ Q+K + G L E AG D
Sbjct: 180 LRSHIPNIDIYNDIY-----QNKI----KNGML----EPYISFSAGSVD----------- 215
Query: 301 PYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
++I LREYL ++F I + E I DDF+ + ND+ P + ++ + +
Sbjct: 216 ---VININLLREYLFHDFGIND-------ERIFDDFVLLVNLYSNDYRPKFDS-DLSKIS 264
Query: 361 INLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFI 394
I+ L+ YK E + ++T+ +L +++ FI
Sbjct: 265 IDDLIETYKSEPSCI--FITEKDNVNLEKLKIFI 296
>gi|71656489|ref|XP_816791.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70881942|gb|EAN94940.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 282
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 115/277 (41%), Gaps = 67/277 (24%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL ++ P + P D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFA----------PCFLSSSSCPA-----------ADCLYIDVNGLVY 39
Query: 61 PCFHPEDRPAPTTFD---EVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKMNQQRS 116
+ D + + +FD ID + + +VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAAALATASEASAVDIDAAILRKLFDIIDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQY 176
RR R S + E +DSN I+ GT FM+ L+ AL +
Sbjct: 100 RRRRRSGGGSRGRNAVE---------------------WDSNSISVGTPFMSRLTEALHF 138
Query: 177 YIHLRL-----------------NNDPGWEK----IKVILSDANVPGEGEHKIMSYVRLQ 215
Y R N G + I I+ D PGEGE KI +R
Sbjct: 139 YCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRRF 198
Query: 216 RNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
R+ YDPNT H + D D+ + +L HE +LR
Sbjct: 199 RSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLR 235
>gi|389601315|ref|XP_001565132.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504991|emb|CAM36567.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1065
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 62/291 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL +++ AD +P D++ N DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRF----ADCF-----------MPADSAVTNYIRESTDNLFIDLNSFLY 45
Query: 61 ------PCFHPEDRPAPT--TFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAPRAKM 111
H R + D V + +FD +D L +V+P+ L+Y+A+DGV+P KM
Sbjct: 46 QAATIITATHRSHRFSSVDEVEDVVLRKLFDLLDDLVSNLVQPKALVYIAVDGVSPLGKM 105
Query: 112 NQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLS 171
+QQR+RR R ++ + E P + + ++DSN I+ GT FMA ++
Sbjct: 106 SQQRARRRRGARRQPSAWPSSSFHHHE--------PAGNINDLWDSNCISVGTRFMAKVT 157
Query: 172 IALQYYIHLRLNNDPGW----EKIKVILSDANV--------------------------P 201
AL +Y R E++++ +DA+V P
Sbjct: 158 EALHFYAVSRTERINAKRLREERVRIASADASVDSAARDSAGLPYAFPFLNIIVDDVLRP 217
Query: 202 GEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
GEGE+KI ++R R Y PNT H + D D+ + +L HE +LR
Sbjct: 218 GEGENKIAEFIRRIRADSSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLR 268
>gi|363539809|ref|YP_004894696.1| mg645 gene product [Megavirus chiliensis]
gi|350610974|gb|AEQ32418.1| putative 5'-3' exonuclease 20 [Megavirus chiliensis]
Length = 782
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 155/646 (23%), Positives = 253/646 (39%), Gaps = 135/646 (20%)
Query: 98 LYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP-----PKSDS 152
L +AIDGV + KM +Q+ RR+ + A + + + + +E+++ K P DS
Sbjct: 140 LLIAIDGVPSKGKMVEQKQRRYLS----AITESYKSNILREYKKYLLKQPDYTYLATKDS 195
Query: 153 QVFDSNVITPGTEFMAVLSIALQY-YIHLRLN-NDPGWEKIKVILSDANVPGEGEHKIMS 210
++ N ITPGT FM L LQ I N P E +I+SD GEGE KI++
Sbjct: 196 IKWNRNKITPGTAFMHKLVSYLQSDKIQKSFTTNRPNLE---IIISDMYETGEGEKKIVN 252
Query: 211 YVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQP 270
YV N YD + +Y DAD+I+L + +LR QQ G
Sbjct: 253 YV----NKYLYDTKSSVMIYSPDADVILLCMLLPVSKLYMLRH-----NQQ----FSG-- 297
Query: 271 GHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP------ 324
+ Y + I +L+ + Y I N P
Sbjct: 298 ----------------------------RNSYDLIDIKSLKNNISY--YINNHPDYSQEN 327
Query: 325 FEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK--EFRALGGYLTDG 382
FEID I D + + GNDF+P + TL +++G N++ A K + R YL
Sbjct: 328 FEID--NINYDIVCLSTLFGNDFVPKIETLNVKKGFQNIMDAYLKTLIKLRDKENYLVTK 385
Query: 383 SKPS-LRRVEHFIQAVGSY--EDRIFQKRARLHQRHAE-----------RIKREKAQ--- 425
SK + E Q + + E+ F K L+ ++ I E +
Sbjct: 386 SKTGYMLNFEFLKQIINNLLPEENDFIKHNNLYNKYITIGQIKNVFNYVEITSENLKGVY 445
Query: 426 ---ARRGDDVEPLAQPDSLVPVSRFHGSRL---ASGPSPSPYQQSECVGR--LDNG---- 473
R D++ L + + + F + L + S + +CV L N
Sbjct: 446 DIFTREYGDLKNLIKNNG--NFTYFETNDLFMNSLKKSVLVFMDGQCVNTSYLSNKEMIK 503
Query: 474 --KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA---KLKELLRDKSDA 528
+ + + PRL+ + ++ + ++N E++ K + +L D
Sbjct: 504 LLRTYYIKYREFPRLNINLNTWSHSIDDYKHKKIVREKNMNEYQKEVYKFEHMLDDYYVK 563
Query: 529 FNSDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR---KDVVLRYTEGLCWVMHYY 585
N++ K K+ + +Y + F K ++ + +V+ Y EG+ WV YY
Sbjct: 564 LNAEPLNLSKNKIDD------FYMDYFGVKLYDKSKNLSSEANNVMKDYIEGMLWVFDYY 617
Query: 586 YEGVCSW-QWFYPYHYAPFASD----LKDL--DQFNISF---------ELGHPFKPFNQL 629
+ +W+Y + AP + LK++ +QF F +L F P QL
Sbjct: 618 FNDTTYINRWYYQHERAPLLNHLYIYLKNINKNQFQNIFDNLPKYRVTDLKKYFNPVEQL 677
Query: 630 LGVFPSASS--HALPEHYRKLMTDPNSPISDFYPTDF-EVDMNGKR 672
+ V P LP +Y+K M N I F T F ++D KR
Sbjct: 678 MYVSPMTPDIIKLLPSNYKKYMLSNN--IDPFLKTYFVDIDEVAKR 721
>gi|371944008|gb|AEX61836.1| putative 5'-3'exonuclease20 [Megavirus courdo7]
Length = 782
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 159/675 (23%), Positives = 262/675 (38%), Gaps = 150/675 (22%)
Query: 84 YIDRLFVMV---------------RPRKLLYMAIDGVAPRAKMNQQRSRRFRASKDAADS 128
Y+DRL + + + + L +AIDGV + KM +Q+ RR+ + A +
Sbjct: 111 YMDRLIITLVINSVLGLIRTYCENKSLETLLIAIDGVPSKGKMVEQKQRRYLS----AIT 166
Query: 129 AAEEERLRQEFEREGRKLP-----PKSDSQVFDSNVITPGTEFMAVLSIALQY-YIHLRL 182
+ + + +E+++ K P DS ++ N ITPGT FM L LQ I
Sbjct: 167 ESYKSNILREYKKYLLKQPDYTYLATKDSIKWNRNKITPGTAFMHKLVSYLQSDKIQKSF 226
Query: 183 N-NDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLAL 241
N P E +I+SD GEGE KI++YV N YD + +Y DAD+I+L +
Sbjct: 227 TTNRPNLE---IIISDMYETGEGEKKIVNYV----NKYLYDTKSSVMIYSPDADVILLCM 279
Query: 242 ATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKP 301
+LR QQ G +
Sbjct: 280 LLPVSKLYMLRH-----NQQ----FSG------------------------------RNS 300
Query: 302 YQFLHIWTLREYLDYEFRIPNPP------FEIDLECIVDDFIFMCFFVGNDFLPHMPTLE 355
Y + I +L+ + Y I N P FEID I D + + GNDF+P + TL
Sbjct: 301 YDLIDIKSLKNNISY--YINNHPDYSQENFEID--NINYDIVCLSTLFGNDFVPKIETLN 356
Query: 356 IREGAINLLMAVYKK--EFRALGGYLTDGSKPS-LRRVEHFIQAVGSY--EDRIFQKRAR 410
+++G N++ A K + R YL SK + E Q + + E+ F K
Sbjct: 357 VKKGFQNIMDAYLKTLIKLRDKENYLVTKSKTGYMLNFEFLKQIINNLLPEENDFIKHNN 416
Query: 411 LHQRHAE-----------RIKREKAQ------ARRGDDVEPLAQPDSLVPVSRFHGSRL- 452
L+ ++ I E + R D++ L + + + F + L
Sbjct: 417 LYNKYITIGQIKNVFNYVEITSENLKGVYDIFTREYGDLKNLIKNNG--NFTYFETNDLF 474
Query: 453 --ASGPSPSPYQQSECVGR--LDNG------KGTSGRPHKVPRLSSGATIGAAIVEAENS 502
+ S + +CV L N + + + PRL+ + ++
Sbjct: 475 MNSLKKSVLVFMDGQCVNTSYLSNKEMIKLLRTYYIKYREFPRLNINLNTWSHSIDDYKH 534
Query: 503 FETDPQENKEEFKA---KLKELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
+ ++N E++ K + +L D N++ K K+ + +Y + F K
Sbjct: 535 KKIVREKNMNEYQKEVYKFEHMLDDYYVKLNAEPLNLSKNKIDD------FYMDYFGVKL 588
Query: 560 PEEREETR---KDVVLRYTEGLCWVMHYYYEGVCSW-QWFYPYHYAPFASD----LKDL- 610
++ + +V+ Y EG+ WV YY+ +W+Y + AP + LK++
Sbjct: 589 YDKSKNLSSEANNVMKDYIEGMLWVFDYYFNDTTYINRWYYQHERAPLLNHLYIYLKNIN 648
Query: 611 -DQFNISF---------ELGHPFKPFNQLLGVFPSASS--HALPEHYRKLMTDPNSPISD 658
+QF F +L F P QL+ V P LP +Y+K M N I
Sbjct: 649 KNQFQNIFDNLPKYRVTDLKKYFNPVEQLMYVSPMTPDIIKLLPSNYKKYMLSNN--IDP 706
Query: 659 FYPTDF-EVDMNGKR 672
F T F ++D KR
Sbjct: 707 FLKTYFVDIDEVAKR 721
>gi|302837081|ref|XP_002950100.1| hypothetical protein VOLCADRAFT_104606 [Volvox carteri f.
nagariensis]
gi|300264573|gb|EFJ48768.1| hypothetical protein VOLCADRAFT_104606 [Volvox carteri f.
nagariensis]
Length = 1148
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 54/246 (21%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F W +EKY +P+D + D+LY+D+N ++H
Sbjct: 1 MGIPGFNVWFSEKY---------------SKAYLPLDK-------VRVDHLYIDLNSVLH 38
Query: 61 PCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ + + + + +P K + +A+DG AP AK+ QR RR
Sbjct: 39 TVMRNAR-----NHGHFHKLLHKRLSAILDVTQPNKSVMIAVDGPAPLAKLLTQRDRR-- 91
Query: 121 ASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFMAVLSIALQYYIHL 180
+++GR + + + ITPGT FM L+ +L Y+
Sbjct: 92 -------------------KKKGRSV---DEGETLTGVAITPGTTFMLDLTHSLTYFCCT 129
Query: 181 RLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
+++ + + LSD+NV GEGE K++ RL R +P H ++G DADLI++A
Sbjct: 130 KMSGK-RYRHLLFELSDSNVMGEGEVKVLG--RLARPWHPGNPKDTHVIFGDDADLILMA 186
Query: 241 LATHEV 246
L +++V
Sbjct: 187 LTSYKV 192
>gi|157869656|ref|XP_001683379.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
gi|68126444|emb|CAJ04205.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
Length = 1068
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 70/295 (23%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MGVP WL +++ AD +P D++ + DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRF----ADCF-----------MPADSAVTDYIRESTDNLFIDLNSFLY 45
Query: 61 PC------------FHPEDRPAPTTFDEVFQCMFDYIDRLFV-MVRPRKLLYMAIDGVAP 107
F+ D + V + +FD +D L + +V+P+ L+Y+A+DGV+P
Sbjct: 46 QAATIITATHRSLRFNSVDE----VENAVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSP 101
Query: 108 RAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFM 167
KM+QQR+RR R ++ ++ E P + + ++DSN I+ GT FM
Sbjct: 102 LGKMSQQRARRRRGARRQPSASPSSPFHHHE--------PAGNINDLWDSNCISVGTRFM 153
Query: 168 AVLSIALQYYI---HLRLNNDPGWEK---------------------------IKVILSD 197
A ++ AL +Y R+N E+ I +I+ D
Sbjct: 154 AKVTEALHFYAVSRTERINAKRLREEQVRIDKADASVDSAASDSAGAPYVFPFISIIVDD 213
Query: 198 ANVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR 252
PGEGE+KI ++R R P Y PNT H + D D+ + +L HE +LR
Sbjct: 214 VLRPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLR 268
>gi|448825634|ref|YP_007418565.1| putative 5'-3' exonuclease 20 [Megavirus lba]
gi|444236819|gb|AGD92589.1| putative 5'-3' exonuclease 20 [Megavirus lba]
Length = 782
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 150/644 (23%), Positives = 254/644 (39%), Gaps = 131/644 (20%)
Query: 98 LYMAIDGVAPRAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLP-----PKSDS 152
L +AIDGV + KM +Q+ RR+ + A + + + + +E+++ K P DS
Sbjct: 140 LLIAIDGVPSKGKMVEQKQRRYLS----AITESYKSNILREYKKYLLKQPDYTYLATKDS 195
Query: 153 QVFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYV 212
++ N ITPGT FM L LQ ++ + +++I+SD GEGE KI++YV
Sbjct: 196 IKWNRNKITPGTAFMHKLVSYLQS-DKIQKSFTTNRSNLEIIISDMYETGEGEKKIVNYV 254
Query: 213 RLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGH 272
N YD + +Y DAD+I+L + +LR QQ G
Sbjct: 255 ----NKYLYDTKSSVMIYSPDADVILLCMLLPVSKLYMLRH-----NQQ----FSG---- 297
Query: 273 LAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPP------FE 326
+ Y + I +L+ + Y I N P F+
Sbjct: 298 --------------------------RNSYDLIDIKSLKNNISY--YINNHPDYSRENFK 329
Query: 327 IDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKK--EFRALGGYLTDGSK 384
ID I D + + GNDF+P + TL +++G N++ A K + R YL SK
Sbjct: 330 ID--NINYDIVCLSTLFGNDFVPKIETLNVKKGFQNIMDAYLKTLIKLRDKENYLVTKSK 387
Query: 385 PS-LRRVEHFIQAVGSY--EDRIFQKRARLHQRHAE-----------RIKREKAQ----- 425
+ E Q + + E+ F K L+ ++ I E +
Sbjct: 388 TGYMLNFEFLKQIINNLLPEENDFIKHNNLYNKYITIGQIKNVFNYVEITSENLKGVYDI 447
Query: 426 -ARRGDDVEPLAQPDSLVPVSRFHGSRL---ASGPSPSPYQQSECVGR--LDNG------ 473
R D++ L + + + F + L + S + +CV L N
Sbjct: 448 FTREYGDLKNLIKNNG--NFTYFETNDLFMNSLKKSVLVFMDGQCVNTSYLSNKEMIKLL 505
Query: 474 KGTSGRPHKVPRLSSGATIGAAIVEAENSFETDPQENKEEFKA---KLKELLRDKSDAFN 530
+ + + PRL+ + ++ + ++N E++ K + +L D N
Sbjct: 506 RTYYIKYREFPRLNINLNTWSHSIDDYKHKKIVREKNMNEYQKEVYKFEHMLDDYYVKLN 565
Query: 531 SDNPEEDKVKLGEPGWKERYYEEKFNAKTPEEREETR---KDVVLRYTEGLCWVMHYYYE 587
++ K K+ + +Y + F K ++ + +V+ Y EG+ WV YY+
Sbjct: 566 AEPLNLSKNKIDD------FYMDYFGVKLYDKSKNLSSEANNVMKDYIEGMIWVFDYYFN 619
Query: 588 GVCSW-QWFYPYHYAPFASD----LKDL--DQFNISF---------ELGHPFKPFNQLLG 631
+W+Y + AP + LK++ +QF F +L F P QL+
Sbjct: 620 DTTYINRWYYQHERAPLLNHLYIYLKNINKNQFQNIFDNLPKYRVTDLKKYFNPVEQLMY 679
Query: 632 VFPSASS--HALPEHYRKLMTDPNSPISDFYPTDF-EVDMNGKR 672
V P LP +Y+K M N I F T F ++D KR
Sbjct: 680 VSPMTPDIIKLLPSNYKKYMLSNN--IDPFLKTYFVDIDEVAKR 721
>gi|284066765|gb|ADB77654.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066767|gb|ADB77655.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066769|gb|ADB77656.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
Length = 221
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 16/219 (7%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSP--SPYQQSE 465
+ R R+K +K + + G + +P + +P ++ + S PSP + Q+S
Sbjct: 61 QNEIRFKARMKAQKKRKKLESGANSNCYNRP-AYIPHGQYAPVAIGSTPSPVLNARQESI 119
Query: 466 CVGRLDNGKGTSGRPHKVPRLS--SGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 522
+ R+ T G V R + + A + + ++EA ++D ++ E +
Sbjct: 120 NMRRMGMHTATDG---SVVRSNHDAAAALKSMLIEAPAKLNDSDISDSSEASTPSQSPQI 176
Query: 523 RDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 559
+ K F+SD EE D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRK---FDSDEEEEPNDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066723|gb|ADB77633.1| 5'-3' exoribonuclease II [Pogonognathellus flavescens]
Length = 221
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 113/216 (52%), Gaps = 10/216 (4%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVTLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERI----KREKAQARRGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSE 465
+ +R R+ KR+KA+++ + +P + +P ++ + S PSP + E
Sbjct: 61 QNEERFKARMKANKKRKKAESQANSNC--YNRP-AYIPHGQYAPVAIGSTPSPVQNAREE 117
Query: 466 CVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLR 523
+ +G T+ V + A + + ++EA + +++ ++ E ++
Sbjct: 118 SINMRRSGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSEVSDSSEASTPGQSPQVK 177
Query: 524 DKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
K D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 178 RKHDSDDEEEP-NDEVRLWEAGFKDRYYESKFDVQA 212
>gi|170105467|ref|XP_001883946.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641126|gb|EDR05388.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 112
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 1 MGVPAFYRWLAEKYPLVVADVIEEEPVVIDGVKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60
MG+P F+R+++E + D E+ V + D + P L DNLYLD NGIIH
Sbjct: 1 MGIPKFFRYVSEIPIDLAVDTREQHSRVW---WVAYDLERAYPMTLLSDNLYLDFNGIIH 57
Query: 61 PCFHPEDRPAP--TTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQ 113
C P D A T ++ +F Y+DRLF ++ +KL +MA+DGVAPRAKMNQ
Sbjct: 58 NCSRPNDEDAHFRLTEEQNNTSIFTYVDRLFGKIKLKKLFFMAVDGVAPRAKMNQ 112
>gi|336373303|gb|EGO01641.1| hypothetical protein SERLA73DRAFT_132070 [Serpula lacrymans var.
lacrymans S7.3]
Length = 75
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 52/61 (85%)
Query: 155 FDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRL 214
+DSN ITPGT FM +L+++L+Y++ ++N DPGW+ ++VI+SDA+VPGEGEHKIM ++R
Sbjct: 15 WDSNAITPGTPFMDLLALSLRYWVVQKMNTDPGWKDLQVIISDASVPGEGEHKIMDFIRR 74
Query: 215 Q 215
Q
Sbjct: 75 Q 75
>gi|284066773|gb|ADB77658.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066775|gb|ADB77659.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066777|gb|ADB77660.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
Length = 221
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSP--SPYQ 462
+ R R+K +K + + +E A + + +P ++ + S PSP + Q
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPQAIGSTPSPVLNARQ 116
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLS--SGATIGAAIVEAENSF-ETDPQENKEEFKAKLK 519
+S + R+ T G V R + + A + + ++EA ++D ++ E
Sbjct: 117 ESINMRRMGMHTATDG---SVVRSNHDAAAALKSMLIEAPAKLNDSDISDSSEASTPSQS 173
Query: 520 ELLRDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 559
++ K F+SD EE D+V+L E G+K+RYYE KF+ +
Sbjct: 174 PQIKRK---FDSDEEEEPNDEVRLWEDGFKDRYYESKFDVQA 212
>gi|170105585|ref|XP_001884005.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641185|gb|EDR05447.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 350
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 69/143 (48%), Gaps = 38/143 (26%)
Query: 588 GVCSWQWFYPYHYAPFAS-----------------DLKDLDQFNISFELGHPFKPFNQLL 630
GV SW WFY YHYAP S DL+ D+ + F+
Sbjct: 144 GVASWGWFYDYHYAPRISGVHRRLGCWTLLVLPIADLRGADEMSFDFQ------------ 191
Query: 631 GVFPSASSHALPEHY----RKLMTDPNSPISDFYPTDFEVDMNGKRYSWQGIAKLPFIDE 686
P + A+P Y R LM DPNSPI DFYP +F D+NGK+ W+ I + FIDE
Sbjct: 192 ---PGNAVEAVPAAYGRVARYLMYDPNSPILDFYPLEFAQDLNGKKQDWEAI--VTFIDE 246
Query: 687 ARLLDEVKKIEHTLTEEEARRNS 709
R L + +H LT EE +RN+
Sbjct: 247 ERPLKAMTARDHCLTPEERKRNA 269
>gi|412985578|emb|CCO19024.1| predicted protein [Bathycoccus prasinos]
Length = 1002
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 48 YDNLYLDMNGIIHPCFHPEDRPAPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAP 107
+D++Y+D+N ++H H T ++ +F + + RPR + A+DG AP
Sbjct: 71 FDHVYVDVNNVLHVAAH-----HTKTESAFYKKLFGLLTGIIRRTRPRHSITFALDGPAP 125
Query: 108 RAKMNQQRSRRFRASKDAADSAAEEERLRQEFEREGRKLPPKSDSQVFDSNVITPGTEFM 167
AK QR RR R S G + P +D ITPG+
Sbjct: 126 MAKTITQRRRRVRLS-------------------SGEREPLSTDLSRMMKLGITPGSRLA 166
Query: 168 AVLSIALQYYIHLRLNNDPGWEKIKVILSDANVPGEGEHKIMSYVRLQRNLPGYDPNTRH 227
+ A++YYI +++ + I LS VPGEGE K++ ++L++ P + +T H
Sbjct: 167 LKVDRAIEYYIASKVHREDFGPDILYELSGTTVPGEGEIKLVRAMQLRQENPNFQNHT-H 225
Query: 228 CLYGLDADLIMLALA---THEVHFSILREVVFT 257
C+ D+D I+LAL T +V S + +VF+
Sbjct: 226 CVVSEDSDAILLALTVNPTMDVFVSGAQRLVFS 258
>gi|237831033|ref|XP_002364814.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|211962478|gb|EEA97673.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|221507695|gb|EEE33299.1| hypothetical protein TGVEG_101580 [Toxoplasma gondii VEG]
Length = 2089
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 104/220 (47%), Gaps = 51/220 (23%)
Query: 46 LEYDNLYLDMNGIIHPCFH---PEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYM 100
L D L+LD N IIH C H P P P + + Q + Y+ RL +VRPRKLL +
Sbjct: 653 LPIDALFLDFNAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLHRLVSLVRPRKLLVL 712
Query: 101 AIDGVAPRAKMNQQRSRRFRASKD--------------------AADSAAEEERLR---- 136
+DGV P AK+NQQRSRRFR S+D AA+ L
Sbjct: 713 TLDGVPPLAKVNQQRSRRFRQSRDDRLAVRLEDEEDEDEGDGRQGCRRAAQTPTLETDAT 772
Query: 137 ---QEFEREG----------RKLPPKSDSQVF--------DSNVITPGTEFMAVLSIALQ 175
QE R RKL ++ S +F D+N I+PGT FM + L+
Sbjct: 773 LNAQETLRAEGREEGDGEGVRKLCGEASSDLFAAVAPPYLDTNCISPGTTFMTLCEQTLK 832
Query: 176 YYIHLRLNNDPGWEKIK-VILSDANVPGEGEHKIMSYVRL 214
+I +L P W ++ V L+ +VPGEGEHK++ +R
Sbjct: 833 KFIVHKLRTSPLWRNLQCVCLNTHSVPGEGEHKLLHLLRF 872
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 291 KGDEVVVPKKP--YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 348
KG + V PK P F R + D P +D E ++DDF+F+ FFVGNDFL
Sbjct: 1266 KGAQAVEPKAPGVVSFSQGEGRRGFAD--------PRLLDPERLIDDFVFLSFFVGNDFL 1317
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
P +P L+I +G + L+ Y ALGGYLT +K +L R+ Q + YE FQ+
Sbjct: 1318 PGLPHLDIFQGGLATLVRSYTAALPALGGYLTLKTKINLERLRRLFQILALYEGPHFQR 1376
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP---- 622
R + L Y GL +++ YY+ W WF+P+ +AP SDL LD ++ + P
Sbjct: 1491 RAQLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDLARLDPQALARAVALPSLRE 1550
Query: 623 ---FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 667
F P+ QLL V P++S+ LP YR L + ++D +P F VD
Sbjct: 1551 DFMFSPYAQLLAVLPASSAALLPRIYRHLPQTRD--VADMFPDTFPVD 1596
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
Q LPG R CLYG+DADL+MLAL+ H + ILRE
Sbjct: 1098 QVALPG-----RICLYGMDADLLMLALSVHRPNLLILRE 1131
>gi|284066761|gb|ADB77652.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 3 JKM-2010]
Length = 221
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 18/220 (8%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSP--SPYQ 462
+ R R+K +K + + +E A + + +P + + S PSP + Q
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQLAPVAIGSTPSPVQNARQ 116
Query: 463 QSECVGRLDNGKGTSGRPHKVPRLS--SGATIGAAIVEAENSF-ETDPQENKEEFKAKLK 519
+S + R+ T G V R + + A + + ++EA + ++D ++ E
Sbjct: 117 ESINMRRMGMHTATDG---SVIRSNHDAAAALKSMLIEAPSKLNDSDKSDSSEASTPSQS 173
Query: 520 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
++ K D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 174 PQVKRKYDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|221487913|gb|EEE26145.1| XRN 5'-3' exonuclease N-terminus domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 2089
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 104/220 (47%), Gaps = 51/220 (23%)
Query: 46 LEYDNLYLDMNGIIHPCFH---PEDRPAPTTFDE--VFQCMFDYIDRLFVMVRPRKLLYM 100
L D L+LD N IIH C H P P P + + Q + Y+ RL +VRPRKLL +
Sbjct: 652 LPIDALFLDFNAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLHRLVSLVRPRKLLVL 711
Query: 101 AIDGVAPRAKMNQQRSRRFRASKD--------------------AADSAAEEERLR---- 136
+DGV P AK+NQQRSRRFR S+D AA+ L
Sbjct: 712 TLDGVPPLAKVNQQRSRRFRQSRDDRLAVRLEDEEDEDEGDGRQGCRRAAQTPTLETDAT 771
Query: 137 ---QEFEREG----------RKLPPKSDSQVF--------DSNVITPGTEFMAVLSIALQ 175
QE R RKL ++ S +F D+N I+PGT FM + L+
Sbjct: 772 LNAQETLRAEGREEGDGEGVRKLCGEASSDLFAAVAPPYLDTNCISPGTTFMTLCEQTLK 831
Query: 176 YYIHLRLNNDPGWEKIK-VILSDANVPGEGEHKIMSYVRL 214
+I +L P W ++ V L+ +VPGEGEHK++ +R
Sbjct: 832 KFIVHKLRTSPLWRNLQCVCLNTHSVPGEGEHKLLHLLRF 871
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 291 KGDEVVVPKKP--YQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFL 348
KG + V PK P F R + D P +D E ++DDF+F+ FFVGNDFL
Sbjct: 1265 KGAQAVEPKAPGVVSFSQGEGRRGFAD--------PRLLDPERLIDDFVFLSFFVGNDFL 1316
Query: 349 PHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQK 407
P +P L+I +G + L+ Y ALGGYLT +K +L R+ Q + YE FQ+
Sbjct: 1317 PGLPHLDIFQGGLATLVRSYTAALPALGGYLTLKTKINLERLRRLFQILALYEGPHFQR 1375
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 567 RKDVVLRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQFNISFELGHP---- 622
R + L Y GL +++ YY+ W WF+P+ +AP SDL LD ++ + P
Sbjct: 1490 RAQLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDLARLDPQALARAVALPSLRE 1549
Query: 623 ---FKPFNQLLGVFPSASSHALPEHYRKLMTDPNSPISDFYPTDFEVD 667
F P+ QLL V P++S+ LP YR L + ++D +P F VD
Sbjct: 1550 DFMFSPYAQLLAVLPASSAALLPRIYRHLPQTRD--VADMFPDTFPVD 1595
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 215 QRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE 253
Q LPG R CLYG+DADL+MLAL+ H + ILRE
Sbjct: 1097 QVALPG-----RICLYGMDADLLMLALSVHRPNLLILRE 1130
>gi|284066797|gb|ADB77670.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 9 JKM-2010]
Length = 221
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
+ R R+K +K + + G + +P + +P ++ + S PSP + E +
Sbjct: 61 QNEIRFKARMKAQKKRKKLESGANSNCYNRP-AYIPHGQYAPVAIGSTPSPVQNARQESI 119
Query: 468 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 525
G T+ V + A + + ++EA + +++ ++ E ++ K
Sbjct: 120 NMRRMGMHTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQXPQVKRK 179
Query: 526 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 HDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066801|gb|ADB77672.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 9 JKM-2010]
Length = 221
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
+ R R+K +K + + G + +P + +P ++ + S PSP + E +
Sbjct: 61 QNEIRFKARMKAQKKRKKLESGANSNCYNRP-AYIPHGQYAPVAIGSTPSPVQNARQESI 119
Query: 468 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 525
G T+ V + A + + ++EA + +++ ++ E ++ K
Sbjct: 120 NMRRMGMHTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQSPQVKRK 179
Query: 526 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 HDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066745|gb|ADB77644.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
Length = 221
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPDSLV-PVSRFHG--SRLASGPSPSPYQQS-- 464
+ R R+K +K + + +E A + P HG + +ASG +PSP + +
Sbjct: 61 QNEVRFKARMKAQKKRKK----LESEANSNCYSRPAYIPHGQLAPVASGSTPSPVRNARE 116
Query: 465 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 522
E + G T+ V + A + + ++EA + ++D + + +
Sbjct: 117 ENINMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPSQSPQV 176
Query: 523 RDKSDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 559
+ K F+SD+ EE D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRK---FDSDDEEEPNDEVRLWEAGFKDRYYESKFDVQA 212
>gi|284066747|gb|ADB77645.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066749|gb|ADB77646.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066751|gb|ADB77647.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066757|gb|ADB77650.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
Length = 221
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 10/216 (4%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
+ R R+K +K + + + ++P + +P + + S PSP + E +
Sbjct: 61 QNEVRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQLAPVAIGSNPSPVRNAREENI 119
Query: 468 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 525
G T+ V + A + + ++EA + ++D + + ++ K
Sbjct: 120 NMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDTSDASDVSTPGQSPQVKRK 179
Query: 526 SDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 559
F+SD+ EE D+V+L E G+K+RYYE KF+ +
Sbjct: 180 ---FDSDDEEEPNDEVRLWEAGFKDRYYESKFDVQA 212
>gi|284066793|gb|ADB77668.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 7 JKM-2010]
Length = 221
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQAR--RGDDVEPLAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
+ R R+K +K + + G + +P + +P ++ + S PSP + E +
Sbjct: 61 QNEIRFKARMKAQKKRKKLESGANSNCYNRP-AYIPHGQYAPVAIGSTPSPVHNARQESI 119
Query: 468 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 525
G T+ V + A + + ++EA + +++ ++ E ++ K
Sbjct: 120 NMRRAGMHTATDGSVVRSNHDAAAALKSMLIEAPSKLNDSEISDSSEGSTPTQSPQVKRK 179
Query: 526 SDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 180 HDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066779|gb|ADB77661.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 4 JKM-2010]
gi|284066781|gb|ADB77662.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 4 JKM-2010]
Length = 220
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
+ R R+K +K + + + ++P + +P ++ + S PSP + E +
Sbjct: 61 QNEIRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQYAPVAIGSTPSPVQNARQESI 119
Query: 468 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 525
G T+ V + A + + ++E + ++D ++ ++ ++ R
Sbjct: 120 NMRRAGMHTATDGSVVRSNHDAAAALKSMLIETPSKLNDSDGNSSEASTPSQSPQVKR-- 177
Query: 526 SDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 559
++SD EE D+V+L E G+K+RYYE KF+ +
Sbjct: 178 --KYDSDEEEEPNDEVRLWEDGFKDRYYESKFDVQA 211
>gi|284066737|gb|ADB77640.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066739|gb|ADB77641.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066741|gb|ADB77642.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066743|gb|ADB77643.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
Length = 221
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 10/216 (4%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEP--LAQPDSLVPVSRFHGSRLASGPSPSPYQQSECV 467
+ R R+K +K + + + ++P + +P + + S PSP + E +
Sbjct: 61 QNEVRFKARMKAQKKRKKLESEANSNCYSRP-AYIPHGQLAPVAIGSTPSPVRNAREENI 119
Query: 468 GRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELLRDK 525
G T+ V + A + + ++EA + ++D + + ++ K
Sbjct: 120 NMRRAGMHTATDGSLVRSNKDAAAALKSMLIEAPSKLNDSDISDASDVSTPSQSPQVKRK 179
Query: 526 SDAFNSDNPEE--DKVKLGEPGWKERYYEEKFNAKT 559
F+SD+ EE D+V+L E G+K+RYYE KF+ +
Sbjct: 180 ---FDSDDEEEPNDEVRLWEAGFKDRYYESKFDVQA 212
>gi|284066789|gb|ADB77666.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 7 JKM-2010]
Length = 224
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 464
+ R R+K +K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVHNARQ 116
Query: 465 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEA----ENSFETDPQENKEEFKAKLK 519
E + G T+ V + A + + ++EA +S +D E ++
Sbjct: 117 ESINMRRAGMHTATDGSVVRSNHDAAAALKSMLIEAPSKLNDSEVSDSSEGTTPSQSPQA 176
Query: 520 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
++ K D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 PQVKRKHDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 215
>gi|117314|sp|P23252.1|CR2_HORVU RecName: Full=Cold-regulated protein 2
gi|167028|gb|AAC98703.1| cold-regulated [Hordeum vulgare]
Length = 202
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/70 (57%), Positives = 49/70 (70%)
Query: 720 SHPLSASIYTLDEHCKQLKIKERVEVKERLNPELSDGMNGYISPCAGDPHPPVFRSPVAS 779
+HP+S IY+L L K+R E+KE+L+P S GMNGYIS C GDP P VFRSPV
Sbjct: 2 AHPISPYIYSLSSKFGHLADKDRNEIKEQLDPSASGGMNGYISLCGGDPSPLVFRSPVDG 61
Query: 780 MEDIMGNQVL 789
+EDIM NQV+
Sbjct: 62 LEDIMDNQVI 71
>gi|284066795|gb|ADB77669.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 8 JKM-2010]
Length = 221
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 12/217 (5%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 464
+ R R+K +K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNARQ 116
Query: 465 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 522
E + G T+ V + A + + ++EA + +++ ++ E +
Sbjct: 117 ESINMRRMGMHTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQSPQV 176
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
+ K D+ + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRKHDSDEEEEP-NDEVRLWEDGFKDRYYESKFDVQA 212
>gi|284066783|gb|ADB77663.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 5 JKM-2010]
gi|284066785|gb|ADB77664.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 5 JKM-2010]
gi|284066787|gb|ADB77665.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 6 JKM-2010]
Length = 224
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 15/220 (6%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 464
+ R R+K K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKANKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNARQ 116
Query: 465 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSFE----TDPQENKEEFKAKLK 519
E + G T+ V + A + + ++EA + +D E ++
Sbjct: 117 ESINMRRMGMHTATDGSVVRSNHDAAAALRSMLIEAPSKLNDSEISDSSEASTPSQSPQA 176
Query: 520 ELLRDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAKT 559
++ K D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 PQVKRKHDSDDEEEP-NDEVRLWEDGFKDRYYESKFDVQA 215
>gi|284066807|gb|ADB77675.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
gi|284066809|gb|ADB77676.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
gi|284066811|gb|ADB77677.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
Length = 221
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 350 HMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHFIQAVGSYEDRIFQKRA 409
H+P+LEIRE AI+ L+ +YKK GG+LTD P L RV+ + +G ED IF+ R
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKTGGWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQ 60
Query: 410 RLHQRHAERIKREKAQARRGDDVEPLAQPD-----SLVPVSRFHGSRLASGPSPSPYQQS 464
+ R R+K +K + + +E A + + +P ++ + S PSP +
Sbjct: 61 QNEIRFKARMKAQKKRKK----LESEANSNCYNRPAYIPHGQYAPVAIGSTPSPVQNARQ 116
Query: 465 ECVGRLDNGKGTSGRPHKV-PRLSSGATIGAAIVEAENSF-ETDPQENKEEFKAKLKELL 522
E + G T+ V + A + + ++E + +++ ++ E +
Sbjct: 117 ESINMRRMGMHTATDGSVVRSNHDAAAALKSMLIETPSKLNDSEISDSSEASTPSQSPQV 176
Query: 523 RDKSDAFNSDNPEEDKVKLGEPGWKERYYEEKFNAK 558
+ K D+ + + P D+V+L E G+K+RYYE KF+ +
Sbjct: 177 KRKHDSDDEEEP-NDEVRLWEDGFKDRYYESKFDVQ 211
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,693,211,068
Number of Sequences: 23463169
Number of extensions: 632338913
Number of successful extensions: 1708487
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 1701563
Number of HSP's gapped (non-prelim): 2694
length of query: 789
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 638
effective length of database: 8,816,256,848
effective search space: 5624771869024
effective search space used: 5624771869024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)