Query 003882
Match_columns 789
No_of_seqs 497 out of 3443
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 07:07:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003882.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003882hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 4.6E-34 1.6E-38 300.6 29.0 248 38-326 5-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 1.5E-33 5.2E-38 297.8 21.1 250 37-326 5-276 (296)
3 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.6E-31 5.3E-36 281.3 29.8 244 169-491 4-272 (284)
4 1dqv_A Synaptotagmin III; beta 100.0 1.8E-31 6.3E-36 281.8 18.0 245 168-491 4-275 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 6.7E-21 2.3E-25 175.6 13.8 126 45-180 6-131 (133)
6 2ep6_A MCTP2 protein; beta san 99.8 1.4E-20 4.8E-25 173.4 12.6 125 376-511 8-132 (133)
7 2dmh_A Myoferlin; beta-sandwic 99.8 6.6E-20 2.3E-24 170.6 16.4 123 53-182 6-134 (140)
8 3b7y_A E3 ubiquitin-protein li 99.8 1E-19 3.5E-24 172.1 17.1 128 52-180 18-152 (153)
9 3f04_A Synaptotagmin-1; C2A, c 99.8 1.9E-20 6.6E-25 174.9 11.9 118 38-162 20-142 (143)
10 2fk9_A Protein kinase C, ETA t 99.8 3.3E-20 1.1E-24 173.8 13.1 119 378-510 26-156 (157)
11 3kwu_A MUNC13-1; calcium bindi 99.8 1.2E-19 4.1E-24 170.5 17.0 119 54-180 17-146 (148)
12 2dmh_A Myoferlin; beta-sandwic 99.8 1.1E-19 3.6E-24 169.2 16.1 123 380-513 6-135 (140)
13 1wfj_A Putative elicitor-respo 99.8 8.2E-20 2.8E-24 169.0 14.0 123 378-512 7-131 (136)
14 3m7f_B E3 ubiquitin-protein li 99.8 2.2E-19 7.6E-24 173.8 16.7 130 52-182 6-142 (176)
15 1wfj_A Putative elicitor-respo 99.8 6.2E-20 2.1E-24 169.8 11.8 123 52-183 8-132 (136)
16 2fk9_A Protein kinase C, ETA t 99.8 7.9E-20 2.7E-24 171.2 12.4 119 52-180 27-156 (157)
17 3kwu_A MUNC13-1; calcium bindi 99.8 4E-19 1.4E-23 166.9 17.3 120 380-510 16-146 (148)
18 2b3r_A Phosphatidylinositol-4- 99.8 1.7E-19 5.8E-24 166.1 13.8 116 41-164 9-132 (134)
19 2d8k_A Synaptotagmin VII; exoc 99.8 1.4E-19 4.7E-24 168.6 13.3 121 38-165 12-138 (141)
20 2bwq_A Regulating synaptic mem 99.8 1.5E-19 5.2E-24 165.6 12.5 115 39-161 5-129 (129)
21 2z0u_A WW domain-containing pr 99.8 4.2E-20 1.4E-24 174.1 8.8 118 38-162 29-155 (155)
22 1v27_A Regulating synaptic mem 99.8 1.2E-19 4E-24 169.2 11.3 121 37-165 6-136 (141)
23 3b7y_A E3 ubiquitin-protein li 99.8 3.3E-19 1.1E-23 168.6 14.5 126 377-511 16-153 (153)
24 1rsy_A Synaptotagmin I; calciu 99.8 2.6E-19 8.8E-24 169.0 13.5 119 38-163 28-151 (152)
25 1wfm_A Synaptotagmin XIII; C2 99.8 5.8E-19 2E-23 163.5 15.3 118 38-165 12-135 (138)
26 3fdw_A Synaptotagmin-like prot 99.8 1.5E-19 5.2E-24 169.8 9.8 122 38-166 9-138 (148)
27 1gmi_A Protein kinase C, epsil 99.8 4.5E-19 1.6E-23 163.9 12.8 119 380-512 5-134 (136)
28 3pyc_A E3 ubiquitin-protein li 99.8 1.3E-18 4.6E-23 159.9 15.4 120 53-179 4-131 (132)
29 2dmg_A KIAA1228 protein; beta- 99.8 3.5E-19 1.2E-23 166.1 11.6 120 38-165 10-138 (142)
30 3m7f_B E3 ubiquitin-protein li 99.8 1.3E-18 4.5E-23 168.4 15.3 126 378-512 5-142 (176)
31 2nq3_A Itchy homolog E3 ubiqui 99.8 7.2E-19 2.5E-23 168.7 13.2 127 53-181 35-161 (173)
32 1rh8_A Piccolo protein; beta-s 99.8 1.9E-19 6.3E-24 168.0 8.8 117 39-164 7-140 (142)
33 1gmi_A Protein kinase C, epsil 99.8 7.8E-19 2.7E-23 162.3 12.8 117 53-181 5-133 (136)
34 3fbk_A RGS3, RGP3, regulator o 99.8 9.4E-19 3.2E-23 165.2 13.1 118 38-164 13-139 (153)
35 2chd_A Rabphilin-3A, exophilin 99.8 8.5E-19 2.9E-23 163.4 11.7 119 38-163 15-141 (142)
36 1rlw_A Phospholipase A2, CALB 99.8 7.3E-19 2.5E-23 160.3 11.0 117 380-508 2-122 (126)
37 1rlw_A Phospholipase A2, CALB 99.8 1.7E-18 5.8E-23 157.9 13.2 114 54-178 3-122 (126)
38 1ugk_A Synaptotagmin IV, KIAA1 99.8 2.4E-18 8.2E-23 159.5 13.8 121 38-164 8-135 (138)
39 2enp_A B/K protein; C2 type 1, 99.8 1.7E-18 5.9E-23 162.4 12.0 120 38-164 12-143 (147)
40 2q3x_A Regulating synaptic mem 99.8 1.5E-18 5.2E-23 166.9 11.8 117 38-164 18-141 (171)
41 1a25_A CALB, protein kinase C 99.8 2.6E-18 8.8E-23 161.5 13.0 116 38-163 19-140 (149)
42 3rdl_A Protein kinase C alpha 99.8 2.2E-18 7.6E-23 159.6 11.7 116 39-164 5-126 (137)
43 3n5a_A Synaptotagmin-7; calciu 99.7 5.2E-18 1.8E-22 157.3 12.2 104 39-144 3-113 (138)
44 1tjx_A Similar to synaptotagmi 99.7 8.9E-18 3E-22 159.7 13.7 122 38-164 11-149 (159)
45 2cm5_A Rabphilin-3A; protein t 99.7 9.8E-18 3.4E-22 160.6 13.9 105 38-144 23-134 (166)
46 1w15_A Synaptotagmin IV; metal 99.7 8E-18 2.7E-22 159.0 12.8 103 38-142 16-125 (153)
47 1rsy_A Synaptotagmin I; calciu 99.7 1.3E-17 4.3E-22 157.3 13.5 119 340-491 26-150 (152)
48 2nq3_A Itchy homolog E3 ubiqui 99.7 1.7E-17 5.9E-22 159.1 14.4 124 379-512 34-162 (173)
49 2d8k_A Synaptotagmin VII; exoc 99.7 3.2E-17 1.1E-21 152.5 15.5 120 340-492 10-136 (141)
50 3pyc_A E3 ubiquitin-protein li 99.7 2E-17 6.8E-22 152.0 13.6 123 381-509 5-131 (132)
51 3fdw_A Synaptotagmin-like prot 99.7 6.8E-18 2.3E-22 158.4 10.1 122 340-493 7-136 (148)
52 2z0u_A WW domain-containing pr 99.7 1.2E-17 4.1E-22 157.3 10.8 103 380-490 42-154 (155)
53 3f04_A Synaptotagmin-1; C2A, c 99.7 2.2E-17 7.4E-22 154.1 12.5 119 339-490 17-141 (143)
54 2bwq_A Regulating synaptic mem 99.7 2.5E-17 8.5E-22 150.7 12.5 101 380-489 17-128 (129)
55 2b3r_A Phosphatidylinositol-4- 99.7 3.6E-17 1.2E-21 150.4 12.7 103 380-491 19-130 (134)
56 1v27_A Regulating synaptic mem 99.7 3E-17 1E-21 152.8 11.9 121 340-492 5-134 (141)
57 2dmg_A KIAA1228 protein; beta- 99.7 4E-17 1.4E-21 152.1 12.1 121 340-492 8-136 (142)
58 3rdl_A Protein kinase C alpha 99.7 6E-17 2E-21 149.9 13.1 103 381-492 16-125 (137)
59 3fbk_A RGS3, RGP3, regulator o 99.7 4.4E-17 1.5E-21 153.7 11.9 120 339-492 10-138 (153)
60 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.3E-16 4.5E-21 147.7 14.9 121 340-492 6-134 (138)
61 1wfm_A Synaptotagmin XIII; C2 99.7 1.3E-16 4.5E-21 147.6 14.8 117 339-491 9-132 (138)
62 1a25_A CALB, protein kinase C 99.7 1E-16 3.4E-21 150.6 13.3 103 381-492 31-140 (149)
63 2q3x_A Regulating synaptic mem 99.7 5.5E-17 1.9E-21 156.0 11.7 105 381-492 30-140 (171)
64 1rh8_A Piccolo protein; beta-s 99.7 2.1E-17 7.2E-22 154.0 8.1 104 381-492 18-139 (142)
65 2chd_A Rabphilin-3A, exophilin 99.7 9.2E-17 3.2E-21 149.6 12.3 119 339-490 12-139 (142)
66 1tjx_A Similar to synaptotagmi 99.7 2.1E-16 7.2E-21 150.2 14.9 119 340-491 9-147 (159)
67 2enp_A B/K protein; C2 type 1, 99.7 9.7E-17 3.3E-21 150.4 11.9 123 340-492 10-142 (147)
68 3n5a_A Synaptotagmin-7; calciu 99.7 2.1E-16 7.2E-21 146.4 13.5 101 380-490 15-123 (138)
69 2cm5_A Rabphilin-3A; protein t 99.7 4.1E-16 1.4E-20 149.2 14.9 107 339-478 20-134 (166)
70 3l9b_A Otoferlin; C2-domain, b 99.7 2.5E-16 8.6E-21 140.6 11.4 118 54-182 21-141 (144)
71 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.7E-16 5.9E-21 144.8 9.6 88 53-147 4-92 (131)
72 1w15_A Synaptotagmin IV; metal 99.6 1.1E-15 3.9E-20 144.1 13.9 117 340-491 14-138 (153)
73 2cjs_A UNC-13 homolog A, MUNC1 99.6 7.1E-16 2.4E-20 146.6 11.8 120 53-180 13-140 (167)
74 2cjt_A UNC-13 homolog A, MUNC1 99.6 5.8E-16 2E-20 141.3 10.4 117 380-510 4-131 (131)
75 3l9b_A Otoferlin; C2-domain, b 99.6 2.5E-15 8.6E-20 134.2 13.1 117 382-513 22-142 (144)
76 2cjs_A UNC-13 homolog A, MUNC1 99.6 3.5E-15 1.2E-19 141.8 12.6 120 379-512 12-142 (167)
77 3jzy_A Intersectin 2; C2 domai 99.6 3.8E-15 1.3E-19 169.6 14.5 123 52-180 385-507 (510)
78 3nsj_A Perforin-1; pore formin 99.6 9.7E-15 3.3E-19 163.4 13.9 112 52-181 392-504 (540)
79 3jzy_A Intersectin 2; C2 domai 99.6 1E-14 3.6E-19 166.0 13.4 119 378-510 384-507 (510)
80 1djx_A PLC-D1, phosphoinositid 99.6 2.4E-14 8.2E-19 164.1 16.2 121 52-180 495-623 (624)
81 3nsj_A Perforin-1; pore formin 99.6 2.9E-14 9.9E-19 159.6 15.8 112 378-511 391-504 (540)
82 1cjy_A CPLA2, protein (cytosol 99.5 2.4E-14 8.3E-19 164.9 10.0 106 52-163 16-127 (749)
83 1djx_A PLC-D1, phosphoinositid 99.5 1.9E-13 6.6E-18 156.6 15.0 121 379-510 495-623 (624)
84 3bxj_A RAS GTPase-activating p 99.5 5.9E-15 2E-19 165.1 -0.1 121 380-513 10-159 (483)
85 1cjy_A CPLA2, protein (cytosol 99.4 3.2E-13 1.1E-17 155.7 10.0 104 378-490 15-125 (749)
86 3bxj_A RAS GTPase-activating p 99.4 4.2E-14 1.4E-18 158.2 -0.3 100 54-164 11-118 (483)
87 3pfq_A PKC-B, PKC-beta, protei 99.2 1E-11 3.5E-16 145.5 10.4 105 54-164 172-282 (674)
88 3qr0_A Phospholipase C-beta (P 99.2 5.7E-11 1.9E-15 138.5 15.1 112 54-181 650-771 (816)
89 3ohm_B 1-phosphatidylinositol- 99.2 3.7E-11 1.3E-15 140.7 13.5 112 54-181 725-845 (885)
90 2zkm_X 1-phosphatidylinositol- 99.2 8.3E-11 2.8E-15 138.1 14.1 112 53-180 677-798 (799)
91 3pfq_A PKC-B, PKC-beta, protei 99.1 1.4E-10 4.8E-15 135.8 12.0 103 381-492 172-281 (674)
92 3qr0_A Phospholipase C-beta (P 99.1 6E-10 2.1E-14 129.9 14.0 110 380-510 649-770 (816)
93 3ohm_B 1-phosphatidylinositol- 99.1 4E-10 1.4E-14 132.0 12.0 109 381-510 725-844 (885)
94 2zkm_X 1-phosphatidylinositol- 99.0 1.5E-09 5E-14 127.5 13.0 111 379-509 676-797 (799)
95 1yrk_A NPKC-delta, protein kin 99.0 1E-08 3.5E-13 88.7 13.3 107 381-510 6-124 (126)
96 2enj_A NPKC-theta, protein kin 98.9 8.4E-09 2.9E-13 90.4 11.8 110 381-510 10-129 (138)
97 1yrk_A NPKC-delta, protein kin 98.8 4.6E-08 1.6E-12 84.6 12.7 114 54-180 6-124 (126)
98 2enj_A NPKC-theta, protein kin 98.8 6.4E-08 2.2E-12 84.9 11.7 114 54-180 10-129 (138)
99 2yrb_A Protein fantom; beta sa 94.1 0.25 8.7E-06 44.7 9.5 124 54-183 18-152 (156)
100 3l4c_A Dedicator of cytokinesi 89.2 7.6 0.00026 37.2 14.0 40 87-126 78-119 (220)
101 2yrb_A Protein fantom; beta sa 87.2 2.4 8.3E-05 38.3 8.7 123 379-511 16-150 (156)
102 2wxf_A Phosphatidylinositol-4, 84.4 3.9 0.00013 48.5 11.0 69 54-125 217-294 (940)
103 2wxf_A Phosphatidylinositol-4, 83.5 4.1 0.00014 48.3 10.7 92 381-478 217-325 (940)
104 3hhm_A Phosphatidylinositol-4, 79.8 6.7 0.00023 46.9 10.7 92 381-478 355-456 (1091)
105 3l4c_A Dedicator of cytokinesi 78.6 6.1 0.00021 37.9 8.1 60 416-476 77-139 (220)
106 3hhm_A Phosphatidylinositol-4, 76.4 9 0.00031 45.8 10.4 87 54-142 355-454 (1091)
107 1e7u_A Phosphatidylinositol 3- 71.3 14 0.00048 43.9 10.3 71 54-125 218-296 (961)
108 2y3a_A Phosphatidylinositol-4, 71.0 4.7 0.00016 48.4 6.3 92 381-478 353-471 (1092)
109 1e7u_A Phosphatidylinositol 3- 67.1 17 0.0006 43.1 10.0 94 381-478 218-331 (961)
110 2y3a_A Phosphatidylinositol-4, 61.4 10 0.00035 45.6 6.6 69 54-125 353-430 (1092)
111 3hd7_A Vesicle-associated memb 26.2 1.2E+02 0.004 24.5 5.6 37 694-730 35-71 (91)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=4.6e-34 Score=300.60 Aligned_cols=248 Identities=24% Similarity=0.365 Sum_probs=209.4
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEEccC--C
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN---YKGKTRHFEKKSNPEWKQVFAFSKEK--I 112 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~~~~T~~~~~t~nP~wne~f~f~~~~--~ 112 (789)
.|..++++.|+... +.|.|+|++|+||+.++..|.+||||++++++ +.++|+++++|.||+|||+|.|.+.. .
T Consensus 5 ~G~l~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~ 82 (284)
T 2r83_A 5 LGKLQYSLDYDFQN--NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 82 (284)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGC
T ss_pred eeEEEEEEEEECCC--CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHh
Confidence 35789999999877 99999999999999999899999999999975 47799999999999999999999853 3
Q ss_pred CCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCC-CccceEEEEEEEEeecCCCcCCccC
Q 003882 113 QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDD-RKVKGEVMLAVWIGTQADEAFPEAW 191 (789)
Q Consensus 113 ~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~~~~~~~~d~~~~~~~ 191 (789)
....|.|+|||++.++++++||++.++|.++..+...+ .|++|....+. ....|+|.+++.+.
T Consensus 83 ~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~-----~w~~L~~~~~~~~~~~G~i~l~l~~~----------- 146 (284)
T 2r83_A 83 AGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTE-----EWRDLQSAEKEEQEKLGDICFSLRYV----------- 146 (284)
T ss_dssp TTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEE-----EEEECBCCSSCCCCCCCEEEEEEEEE-----------
T ss_pred CcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcce-----eEEEeeccccccccccccEEEEEEec-----------
Confidence 46899999999999999999999999999998765444 89999886542 24679999988775
Q ss_pred CCCCcccCCCccccccccccccCccEEEEEEEEEeecCCCCCCCCCCCeEEEEEEC--C---eEEeeecccCCCCCCccC
Q 003882 192 HSDAATVEGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVEPLDKSQLPQAFVEAQVG--N---QVLKTKLCPTRTTNPLWN 266 (789)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~v~~ar~L~~~~~~~~~dpyv~v~l~--~---~~~kT~~~~~~t~nP~wn 266 (789)
+..+.|.|.|++|++|+.++.++.+||||++.+. + ..++|+++++ +.||.||
T Consensus 147 ----------------------p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wn 203 (284)
T 2r83_A 147 ----------------------PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYN 203 (284)
T ss_dssp ----------------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEE
T ss_pred ----------------------CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEc
Confidence 2334699999999999999988999999999985 2 4678999987 9999999
Q ss_pred ceeEEEeeCC--CCCeEEEEEEEccCCCCCCceEEEEEeccccccc--------cCCCCCcceeEEcccc
Q 003882 267 EDLIFVAAEP--FEEQLVLTVENKVTPAKDEPLGRLRLSLNVIERR--------LDHRPVHSKWFNLEKF 326 (789)
Q Consensus 267 e~f~f~~~~~--~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~--------~~~~~~~~~w~~L~~~ 326 (789)
|.|.|.+... ....|.|+|||++..+++++||++.+++..+... ...+....+|++|.+.
T Consensus 204 e~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 204 ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred eeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 9999998654 2447999999999999999999999999764221 1123445789999876
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=1.5e-33 Score=297.77 Aligned_cols=250 Identities=26% Similarity=0.348 Sum_probs=205.1
Q ss_pred ccccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC---CeeeeeccccCCCCCeeccEEEEEccC--
Q 003882 37 WISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLG---NYKGKTRHFEKKSNPEWKQVFAFSKEK-- 111 (789)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~---~~~~~T~~~~~t~nP~wne~f~f~~~~-- 111 (789)
..|...+++.|+... +.|.|+|++|++|+.+|..|.+||||++++. .+.++|+++++|+||+|||+|.|.+..
T Consensus 5 ~~G~l~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 82 (296)
T 1dqv_A 5 PCGRISFALRYLYGS--DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAE 82 (296)
T ss_dssp SSCEEEEEEECCSSS--CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred eeeEEEEEEEEeCCC--CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHH
Confidence 356789999999977 9999999999999999999999999999993 467899999999999999999999843
Q ss_pred CCCceEEEEEEeCCCCCCCceeEEEEEE-ccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEeecCCCcCCcc
Q 003882 112 IQSSVLEVFVRDREIVGRDDYIGKVVFD-MNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGTQADEAFPEA 190 (789)
Q Consensus 112 ~~~~~l~v~V~d~~~~~~d~~lG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~~d~~~~~~ 190 (789)
.....|+|+|||+|.++++++||++.++ +.++..... ....|++|....+.....|+|.+++.|.
T Consensus 83 l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~----~~~~w~~L~~~~~~~~~~G~i~vsl~y~---------- 148 (296)
T 1dqv_A 83 LAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPP----DRPLWRDILEGGSEKADLGELNFSLCYL---------- 148 (296)
T ss_dssp GSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCS----SCCCCEECBCCSSCCSCCCEEEEEEEEE----------
T ss_pred hcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCc----cceeeeccccccccccccceEEEEEEec----------
Confidence 3356999999999999999999999996 544443211 1237999987665545689999998875
Q ss_pred CCCCCcccCCCccccccccccccCccEEEEEEEEEeecCCCCCCCCCCCeEEEEEEC--C---eEEeeecccCCCCCCcc
Q 003882 191 WHSDAATVEGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVEPLDKSQLPQAFVEAQVG--N---QVLKTKLCPTRTTNPLW 265 (789)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~v~~ar~L~~~~~~~~~dpyv~v~l~--~---~~~kT~~~~~~t~nP~w 265 (789)
+..+.|.|.|++|++|+.++..+.+||||++++. + ++++|+++++ +.||.|
T Consensus 149 -----------------------~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~w 204 (296)
T 1dqv_A 149 -----------------------PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTY 204 (296)
T ss_dssp -----------------------TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEE
T ss_pred -----------------------cccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeE
Confidence 2235799999999999999988999999999996 2 5789999987 999999
Q ss_pred CceeEEEeeCC--CCCeEEEEEEEccCCCCCCceEEEEEecccccc-----cc----CCCCCcceeEEcccc
Q 003882 266 NEDLIFVAAEP--FEEQLVLTVENKVTPAKDEPLGRLRLSLNVIER-----RL----DHRPVHSKWFNLEKF 326 (789)
Q Consensus 266 ne~f~f~~~~~--~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~-----~~----~~~~~~~~w~~L~~~ 326 (789)
||.|.|.+... ....|.|+|||++..+++++||++.+++..+.. +. ..+....+|+.|...
T Consensus 205 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 205 NEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp EECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred CceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 99999988654 245799999999999999999999999987642 00 022345667777665
No 3
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1.6e-31 Score=281.27 Aligned_cols=244 Identities=23% Similarity=0.299 Sum_probs=201.1
Q ss_pred cceEEEEEEEEeecCCCcCCccCCCCCcccCCCccccccccccccCccEEEEEEEEEeecCCCCCCCCCCCeEEEEEECC
Q 003882 169 VKGEVMLAVWIGTQADEAFPEAWHSDAATVEGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVEPLDKSQLPQAFVEAQVGN 248 (789)
Q Consensus 169 ~~G~l~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~v~~ar~L~~~~~~~~~dpyv~v~l~~ 248 (789)
..|+|.+++.|. +..+.|.|+|++|++|+.++.++.+||||++.+++
T Consensus 4 ~~G~l~~~l~y~---------------------------------~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~ 50 (284)
T 2r83_A 4 KLGKLQYSLDYD---------------------------------FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP 50 (284)
T ss_dssp CCCEEEEEEEEE---------------------------------TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEET
T ss_pred ceeEEEEEEEEE---------------------------------CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEc
Confidence 479999999886 23357999999999999999889999999999963
Q ss_pred ---eEEeeecccCCCCCCccCceeEEEeeCC--CCCeEEEEEEEccCCCCCCceEEEEEeccccccccCCCCCcceeEEc
Q 003882 249 ---QVLKTKLCPTRTTNPLWNEDLIFVAAEP--FEEQLVLTVENKVTPAKDEPLGRLRLSLNVIERRLDHRPVHSKWFNL 323 (789)
Q Consensus 249 ---~~~kT~~~~~~t~nP~wne~f~f~~~~~--~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~w~~L 323 (789)
+.++|+++++ +.||.|||+|.|.+... ....|.|+|||++.++++++||++.++|.++.. ......|++|
T Consensus 51 ~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~----~~~~~~w~~L 125 (284)
T 2r83_A 51 DKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF----GHVTEEWRDL 125 (284)
T ss_dssp CTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCC----SSCEEEEEEC
T ss_pred CCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhccc----CCcceeEEEe
Confidence 5789999987 99999999999998643 457899999999998999999999999999863 2346789999
Q ss_pred cccCcccchhcccccccccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCC
Q 003882 324 EKFGFGALELDKRHELKFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRG 403 (789)
Q Consensus 324 ~~~~~~~~~g~~~~~~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~ 403 (789)
.... .......|.|.+.+.+. +..|.|.|.|++|+||+.++ ..|
T Consensus 126 ~~~~--------~~~~~~~G~i~l~l~~~-------------------------p~~~~l~v~v~~a~~L~~~d---~~~ 169 (284)
T 2r83_A 126 QSAE--------KEEQEKLGDICFSLRYV-------------------------PTAGKLTVVILEAKNLKKMD---VGG 169 (284)
T ss_dssp BCCS--------SCCCCCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCS---TTS
T ss_pred eccc--------cccccccccEEEEEEec-------------------------CcCCceEEEEEEeECCCCcC---CCC
Confidence 8752 11223468888777542 23479999999999999874 457
Q ss_pred CcCcEEEEEEC--C---EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECc
Q 003882 404 TTDAYCVAKYG--L---KWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLS 475 (789)
Q Consensus 404 ~~dpyv~v~~~--~---~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~ 475 (789)
.+||||++.+. + .+.+|+++++|+||+|||.|.|.+..+ ...|.|+|||++.++ ++++||++.|+++
T Consensus 170 ~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~-----~~~~iG~~~i~l~ 244 (284)
T 2r83_A 170 LSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG-----KNDAIGKVFVGYN 244 (284)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSS-----CCCEEEEEEEETT
T ss_pred CcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCC-----CCcEEEEEEECCC
Confidence 89999999983 3 468999999999999999999999754 347999999999986 8999999999998
Q ss_pred ccc------------cCceEeeeEeeee
Q 003882 476 TLE------------ADRIYTHSYPLLV 491 (789)
Q Consensus 476 ~l~------------~~~~~~~~~~L~~ 491 (789)
.+. .+.....||+|..
T Consensus 245 ~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 245 STGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp CCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 632 3456788999864
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=1.8e-31 Score=281.82 Aligned_cols=245 Identities=21% Similarity=0.300 Sum_probs=198.7
Q ss_pred ccceEEEEEEEEeecCCCcCCccCCCCCcccCCCccccccccccccCccEEEEEEEEEeecCCCCCCCCCCCeEEEEEE-
Q 003882 168 KVKGEVMLAVWIGTQADEAFPEAWHSDAATVEGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVEPLDKSQLPQAFVEAQV- 246 (789)
Q Consensus 168 ~~~G~l~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~v~~ar~L~~~~~~~~~dpyv~v~l- 246 (789)
...|+|.+++.|. +..+.|.|+|++|++|+.++.++.+||||++++
T Consensus 4 ~~~G~l~~~l~y~---------------------------------~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~ 50 (296)
T 1dqv_A 4 APCGRISFALRYL---------------------------------YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLL 50 (296)
T ss_dssp CSSCEEEEEEECC---------------------------------SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECT
T ss_pred CeeeEEEEEEEEe---------------------------------CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEE
Confidence 4589999999875 233579999999999999999999999999999
Q ss_pred --CCeEEeeecccCCCCCCccCceeEEEeeCC--CCCeEEEEEEEccCCCCCCceEEEEEe-ccccccccCCCCCcceeE
Q 003882 247 --GNQVLKTKLCPTRTTNPLWNEDLIFVAAEP--FEEQLVLTVENKVTPAKDEPLGRLRLS-LNVIERRLDHRPVHSKWF 321 (789)
Q Consensus 247 --~~~~~kT~~~~~~t~nP~wne~f~f~~~~~--~~~~l~i~V~d~d~~~~d~~iG~~~i~-l~~l~~~~~~~~~~~~w~ 321 (789)
+.+.++|+++++ +.||.|||+|.|.+... ....|.|+|||++.++++++||++.++ +.++.. .......|+
T Consensus 51 ~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~---~~~~~~~w~ 126 (296)
T 1dqv_A 51 PDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAE---QPPDRPLWR 126 (296)
T ss_dssp TSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGS---SCSSCCCCE
T ss_pred cCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEecccccccc---CCccceeee
Confidence 467899999987 99999999999998543 345899999999999999999999996 444432 122356799
Q ss_pred EccccCcccchhcccccccccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCC
Q 003882 322 NLEKFGFGALELDKRHELKFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDG 401 (789)
Q Consensus 322 ~L~~~~~~~~~g~~~~~~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~ 401 (789)
+|.... ......|.|.+.++.. +..|.|.|.|++|+||+.++ .
T Consensus 127 ~L~~~~---------~~~~~~G~i~vsl~y~-------------------------~~~~~l~v~v~~a~~L~~~d---~ 169 (296)
T 1dqv_A 127 DILEGG---------SEKADLGELNFSLCYL-------------------------PTAGLLTVTIIKASNLKAMD---L 169 (296)
T ss_dssp ECBCCS---------SCCSCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCS---S
T ss_pred cccccc---------ccccccceEEEEEEec-------------------------cccceeEEEEEEeecCCccC---C
Confidence 997652 2233478888877642 23479999999999999884 4
Q ss_pred CCCcCcEEEEEEC--C---EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEE
Q 003882 402 RGTTDAYCVAKYG--L---KWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIR 473 (789)
Q Consensus 402 ~~~~dpyv~v~~~--~---~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~ 473 (789)
.|.+||||++.+. + .++||+++++|+||+|||.|.|.+... ...|.|+|||++.++ .|++||.+.|+
T Consensus 170 ~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~-----~~~~iG~~~i~ 244 (296)
T 1dqv_A 170 TGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIG-----HNEVIGVCRVG 244 (296)
T ss_dssp SSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSS-----CCEEEEECCCS
T ss_pred CCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCC-----CCceEEEEEEC
Confidence 5789999999995 3 568999999999999999999998754 358999999999986 89999999999
Q ss_pred Cccccc-------------CceEeeeEeeee
Q 003882 474 LSTLEA-------------DRIYTHSYPLLV 491 (789)
Q Consensus 474 l~~l~~-------------~~~~~~~~~L~~ 491 (789)
+..+.. ++....|++|..
T Consensus 245 l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 245 PEAADPHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp SCTTCHHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred CccCCchhHHHHHHHHhCCCCceeEeeeccC
Confidence 998642 445667777753
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=6.7e-21 Score=175.57 Aligned_cols=126 Identities=32% Similarity=0.435 Sum_probs=111.7
Q ss_pred eeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeC
Q 003882 45 STYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDR 124 (789)
Q Consensus 45 ~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~ 124 (789)
..|.. +.+.|.|+|++|++|+..+..|.+||||++++++++++|+++++|.||+|||+|.|.+.+. ...|.|+|||+
T Consensus 6 ~~~~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 6 SGDVK--DVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CCSCC--CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred ccccC--CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 34444 4499999999999999999899999999999999999999999999999999999999875 48899999999
Q ss_pred CCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 125 EIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 125 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
+.++++++||++.++|.++..+. . .||+|.+..+.....|+|++++.|.
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~--~-----~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQ--P-----NCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSC--C-----EECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCC--c-----eEEEeecCCCCCccceEEEEEEEEE
Confidence 99989999999999999997542 2 8999998776556789999998874
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=1.4e-20 Score=173.41 Aligned_cols=125 Identities=28% Similarity=0.468 Sum_probs=110.1
Q ss_pred cCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCCCceEEEEEEeCCC
Q 003882 376 WKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLVDNFNPKWNEQYTWEVYDPCTVITLGVFDNCH 455 (789)
Q Consensus 376 ~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~ 455 (789)
+.++.|.|.|+|++|+||++++ ..|.+||||+++++++.++|+++++++||.|||.|.|.+.++...|.|+|||++.
T Consensus 8 ~~~~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~ 84 (133)
T 2ep6_A 8 DVKDVGILQVKVLKAADLLAAD---FSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDG 84 (133)
T ss_dssp SCCCSEEEEEEEEEEESCCCSS---SSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEET
T ss_pred ccCCceEEEEEEEeeECCCCCC---CCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCC
Confidence 3566799999999999999874 4578999999999999999999999999999999999999888899999999998
Q ss_pred CCCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCccceEEEEEEEEee
Q 003882 456 LGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVKKMGELQLAVRFTC 511 (789)
Q Consensus 456 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~ 511 (789)
.+ +|++||++.|+|.++..+. ..||+|......+ +..|+|+|+++|.+
T Consensus 85 ~~-----~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 85 DK-----PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp TE-----EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred CC-----CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 75 7899999999999998765 6899998654333 45799999999875
No 7
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=6.6e-20 Score=170.58 Aligned_cols=123 Identities=25% Similarity=0.421 Sum_probs=108.8
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEccCC---CCceEEEEEEeCCCCCC
Q 003882 53 MFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFEKKSNPEWKQVFAFSKEKI---QSSVLEVFVRDREIVGR 129 (789)
Q Consensus 53 ~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~~~~~---~~~~l~v~V~d~~~~~~ 129 (789)
.+.|.|+|++|+||+..+. |.+||||++++++++++|+++++|.||+|||+|.|.+... ....|.|+|||++.+++
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~ 84 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQ 84 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSS
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCC
Confidence 3889999999999999998 9999999999999999999999999999999999998643 46899999999999999
Q ss_pred CceeEEEEEEccccCCCCCCCCCCCCeeEE---cccCCCCCccceEEEEEEEEeec
Q 003882 130 DDYIGKVVFDMNEVPTRVPPDSPLAPQWYR---LEDRRDDRKVKGEVMLAVWIGTQ 182 (789)
Q Consensus 130 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~---L~~~~~~~~~~G~l~l~~~~~~~ 182 (789)
|++||++.|+|.++..+...+ .|++ |.+..+. ...|+|.+++.|.+.
T Consensus 85 ~~~lG~~~i~l~~l~~~~~~~-----~w~~l~~l~~~~~~-~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 85 NKLIGTATVALKDLTGDQSRS-----LPYKLISLLNEKGQ-DTGATIDLVIGYDPP 134 (140)
T ss_dssp CCCCEEEEEEGGGTCSSSCEE-----EEEEEEEEECTTCC-EEEEEEEEEEEECCC
T ss_pred CceEEEEEEEHHHhccCCCce-----eEEeeeeccCCCCC-CCCCEEEEEEEEECC
Confidence 999999999999998775544 8988 7665543 567999999999754
No 8
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.83 E-value=1e-19 Score=172.09 Aligned_cols=128 Identities=27% Similarity=0.381 Sum_probs=104.5
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeCC
Q 003882 52 QMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN------YKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDRE 125 (789)
Q Consensus 52 ~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~------~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~ 125 (789)
..+.|.|+|++|++|+..+..|.+||||++++.+ +.++|+++++|.||+|||+|.|.+... ...|.|+|||++
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d~d 96 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFDEN 96 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEECC
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEECC
Confidence 4589999999999999999889999999999984 578999999999999999999999765 589999999999
Q ss_pred CCCCCceeEEEEEEccccCCCCCCC-CCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 126 IVGRDDYIGKVVFDMNEVPTRVPPD-SPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 126 ~~~~d~~lG~~~i~l~~l~~~~~~~-~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
.++++++||++.|+|.++..+.... ..+...||+|.+..+.....|+|.+++.|.
T Consensus 97 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 97 RLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp SSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 9999999999999999998765321 233459999988765446789999999885
No 9
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.83 E-value=1.9e-20 Score=174.88 Aligned_cols=118 Identities=27% Similarity=0.403 Sum_probs=105.2
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC---CeeeeeccccCCCCCeeccEEEEEccC--C
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLG---NYKGKTRHFEKKSNPEWKQVFAFSKEK--I 112 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~---~~~~~T~~~~~t~nP~wne~f~f~~~~--~ 112 (789)
.|...+++.|+... +.|.|+|++|++|+..+..+.+||||++++. .++++|+++++|.||+|||+|.|.+.. .
T Consensus 20 ~G~l~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 97 (143)
T 3f04_A 20 LGKLQYSLDYDFQN--NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 97 (143)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHH
T ss_pred eEEEEEEEEEeCCC--CEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhc
Confidence 56678999999877 9999999999999999988999999999994 357899999999999999999999853 3
Q ss_pred CCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEccc
Q 003882 113 QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLED 162 (789)
Q Consensus 113 ~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~ 162 (789)
....|.|+|||++.++++++||++.++|.++..+...+ .||+|+.
T Consensus 98 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~-----~W~~L~~ 142 (143)
T 3f04_A 98 GGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTE-----EWRDLQS 142 (143)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEE-----EEEECBC
T ss_pred CCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcc-----eEEECcC
Confidence 45899999999999999999999999999998876555 9999975
No 10
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.83 E-value=3.3e-20 Score=173.79 Aligned_cols=119 Identities=24% Similarity=0.283 Sum_probs=102.9
Q ss_pred CCccEEEEEEEEccCCCCCccCC-------CCCCcCcEEEEEECCEE-EeeccccCCCCCccccEEEEEEeCCCceEEEE
Q 003882 378 QPIGILEVGILSAQGLLPMKTRD-------GRGTTDAYCVAKYGLKW-VRTRTLVDNFNPKWNEQYTWEVYDPCTVITLG 449 (789)
Q Consensus 378 ~~~g~l~v~v~~a~~L~~~~~~~-------~~~~~dpyv~v~~~~~~-~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~ 449 (789)
...|.|+|+|++|+||+++|... ..|.+||||+|.++++. .||+++++|+||+|||.|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 45699999999999999886310 13679999999998876 799999999999999999999875 5689999
Q ss_pred EEeCCCCCCCCCCCCCccEEEEEECcccccC----ceEeeeEeeeecCCCCCccceEEEEEEEEe
Q 003882 450 VFDNCHLGGSGTKPDSRIGKVRIRLSTLEAD----RIYTHSYPLLVLNPSGVKKMGELQLAVRFT 510 (789)
Q Consensus 450 v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 510 (789)
|||+|.++ .|++||++.|+|.++..+ ...+.||+|. +.|+|+|+++|.
T Consensus 105 V~D~d~~~-----~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~--------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLG-----YDHFVANCTLQFQELLRTTGASDTFEGWVDLE--------PEGKVFVVITLT 156 (157)
T ss_dssp EEECCSSS-----SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB--------SSCEEEEEEEEC
T ss_pred EEECCCCC-----CCCEEEEEEEEHHHhhcccCCCCcccEEEECC--------CCcEEEEEEEEE
Confidence 99999986 899999999999999865 6789999995 259999999874
No 11
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.83 E-value=1.2e-19 Score=170.52 Aligned_cols=119 Identities=29% Similarity=0.530 Sum_probs=107.1
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeCCCC------
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIV------ 127 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~------ 127 (789)
+.|.|+|++|++|+..+..|.+||||+++++++.++|+++++|.||.|||+|.|.+... ...|.|+|||++..
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~~~ 95 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSRVK 95 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHHHH
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCcccccc
Confidence 89999999999999999999999999999999999999999999999999999999766 48999999999986
Q ss_pred -----CCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 128 -----GRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 128 -----~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
+++++||++.++|.++... .+ .||+|....+.....|+|.+++.|.
T Consensus 96 ~~~~~~~~~~lG~~~i~l~~l~~~--~~-----~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 96 QRFKRESDDFLGQTIIEVRTLSGE--MD-----VWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp TTTSSCSSEEEEEEEEEGGGCCSE--EE-----EEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccCCCCccEEEEEEEHHHCcCC--CC-----EEEEcccCCCCCCCceEEEEEEEEE
Confidence 7899999999999999432 23 8999997766556789999999875
No 12
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=169.18 Aligned_cols=123 Identities=23% Similarity=0.323 Sum_probs=107.7
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeeccccCCCCCccccEEEEEEeC----CCceEEEEEEeCCC
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLVDNFNPKWNEQYTWEVYD----PCTVITLGVFDNCH 455 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~----~~~~l~v~v~d~~~ 455 (789)
.|.|.|+|++|+||+.++ . +.+||||+++++++++||+++++++||+|||.|.|.+.. ....|.|+|||++.
T Consensus 6 ~g~L~v~v~~a~~L~~~~---~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTK---F-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp CCEEEEEEEEEESCCCCS---S-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CcEEEEEEEEeeCCCCCC---C-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 489999999999999874 4 789999999999999999999999999999999999975 36799999999998
Q ss_pred CCCCCCCCCCccEEEEEECcccccCceEeeeEe---eeecCCCCCccceEEEEEEEEeecC
Q 003882 456 LGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYP---LLVLNPSGVKKMGELQLAVRFTCLS 513 (789)
Q Consensus 456 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~---L~~~~~~g~~~~G~i~l~~~f~~~~ 513 (789)
++ .|++||++.|+|.++..+.....|++ |... .+....|+|+|+++|.|..
T Consensus 82 ~~-----~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~--~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 82 IG-----QNKLIGTATVALKDLTGDQSRSLPYKLISLLNE--KGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp SS-----SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT--TCCEEEEEEEEEEEECCCB
T ss_pred CC-----CCceEEEEEEEHHHhccCCCceeEEeeeeccCC--CCCCCCCEEEEEEEEECCC
Confidence 76 78999999999999998888889988 5432 3444579999999998753
No 13
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.82 E-value=8.2e-20 Score=169.03 Aligned_cols=123 Identities=24% Similarity=0.337 Sum_probs=108.7
Q ss_pred CCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeecccc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCC
Q 003882 378 QPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLV-DNFNPKWNEQYTWEVYDPCTVITLGVFDNCHL 456 (789)
Q Consensus 378 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~ 456 (789)
.+.|.|.|+|++|+||+.++. .+.+||||+|+++++.+||++++ +++||+|||.|.|.+.+....|.|+|||++.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADF---LNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCS---SCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCccc---CCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 356899999999999998743 47899999999999999999999 89999999999999998788999999999987
Q ss_pred CCCCCCCCCccEEEEEECccc-ccCceEeeeEeeeecCCCCCccceEEEEEEEEeec
Q 003882 457 GGSGTKPDSRIGKVRIRLSTL-EADRIYTHSYPLLVLNPSGVKKMGELQLAVRFTCL 512 (789)
Q Consensus 457 ~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~~ 512 (789)
+ +|++||++.|+|.++ ..+.....||+|. . +.+..|+|+|+++|.|.
T Consensus 84 ~-----~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~---~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 84 T-----EDDAVGEATIPLEPVFVEGSIPPTAYNVV-K---DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp T-----TTCCSEEEEEESHHHHHHSEEEEEEEEEE-E---TTEEEEEEEEEEEEEEC
T ss_pred C-----CCceEEEEEEEHHHhccCCCCCcEEEEee-c---CCccCEEEEEEEEEEeC
Confidence 6 799999999999999 5566678999997 2 23457999999999875
No 14
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.81 E-value=2.2e-19 Score=173.82 Aligned_cols=130 Identities=25% Similarity=0.380 Sum_probs=104.4
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeCC
Q 003882 52 QMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN------YKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDRE 125 (789)
Q Consensus 52 ~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~------~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~ 125 (789)
..+.|.|+|++|++|+..+..|.+||||+|++++ .+++|++++++.||+|||+|.|.+... ...|.|+|||++
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~d 84 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDEN 84 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEECC
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEECC
Confidence 3489999999999999999899999999999986 578999999999999999999999754 479999999999
Q ss_pred CCCCCceeEEEEEEccccCCCCCC-CCCCCCeeEEcccCCCCCccceEEEEEEEEeec
Q 003882 126 IVGRDDYIGKVVFDMNEVPTRVPP-DSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGTQ 182 (789)
Q Consensus 126 ~~~~d~~lG~~~i~l~~l~~~~~~-~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~ 182 (789)
.++++++||++.|+|.++...... +......||+|....+.+...|+|.+++.|.+.
T Consensus 85 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 85 RLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 999999999999999999876432 223344899999876665678999999999865
No 15
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.81 E-value=6.2e-20 Score=169.85 Aligned_cols=123 Identities=22% Similarity=0.354 Sum_probs=108.0
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeecccc-CCCCCeeccEEEEEccCCCCceEEEEEEeCCCCCCC
Q 003882 52 QMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFE-KKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIVGRD 130 (789)
Q Consensus 52 ~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~-~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~~~d 130 (789)
+.+.|.|+|++|++|+..+..|.+||||+|++++++++|++++ +|.||+|||+|.|.+.+ ....|.|+|||++.+++|
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~~d 86 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGTED 86 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCTTT
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCCCC
Confidence 4589999999999999999889999999999999999999998 89999999999999977 468999999999999999
Q ss_pred ceeEEEEEEccccCC-CCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEeecC
Q 003882 131 DYIGKVVFDMNEVPT-RVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGTQA 183 (789)
Q Consensus 131 ~~lG~~~i~l~~l~~-~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~~ 183 (789)
++||++.|+|.++.. +.... .||+|. .. ....|+|.+++.|.+..
T Consensus 87 ~~lG~~~i~l~~l~~~~~~~~-----~w~~L~-~~--~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 87 DAVGEATIPLEPVFVEGSIPP-----TAYNVV-KD--EEYKGEIWVALSFKPSG 132 (136)
T ss_dssp CCSEEEEEESHHHHHHSEEEE-----EEEEEE-ET--TEEEEEEEEEEEEEECC
T ss_pred ceEEEEEEEHHHhccCCCCCc-----EEEEee-cC--CccCEEEEEEEEEEeCC
Confidence 999999999999943 32222 899998 22 35789999999998643
No 16
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.81 E-value=7.9e-20 Score=171.19 Aligned_cols=119 Identities=23% Similarity=0.374 Sum_probs=99.6
Q ss_pred ceeEEEEEEEEeeCCCCCCC----------CCCCCcEEEEEECCee-eeeccccCCCCCeeccEEEEEccCCCCceEEEE
Q 003882 52 QMFYLYVRVEKARDLPTNPV----------SGSCDPYVEVKLGNYK-GKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVF 120 (789)
Q Consensus 52 ~~~~L~V~v~~a~~L~~~~~----------~g~~dpyv~v~~~~~~-~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~ 120 (789)
..|.|.|+|++|+||+++|. .|.+||||+|.+++++ .||+++++|+||+|||+|.|.+.+ ...|.|+
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~~~ 104 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLELA 104 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEEEE
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEEEEE
Confidence 34999999999999998873 3679999999999875 699999999999999999999865 3689999
Q ss_pred EEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 121 VRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 121 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
|||++.+++|++||++.|+|.++..+.. .......||+|++ .|.|++.+.+.
T Consensus 105 V~D~d~~~~dd~iG~~~i~l~~l~~~~~-~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLGYDHFVANCTLQFQELLRTTG-ASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHHHHHT-TCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred EEECCCCCCCCEEEEEEEEHHHhhcccC-CCCcccEEEECCC-------CcEEEEEEEEE
Confidence 9999999999999999999999985400 0111238999974 58899888763
No 17
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.81 E-value=4e-19 Score=166.91 Aligned_cols=120 Identities=24% Similarity=0.390 Sum_probs=104.9
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCCCceEEEEEEeCCCC---
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLVDNFNPKWNEQYTWEVYDPCTVITLGVFDNCHL--- 456 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~--- 456 (789)
.|.|+|+|++|+||+.++. .|.+||||++.++++.++|+++++|+||.|||.|.|.+..+...|.|+|||++..
T Consensus 16 ~~~L~V~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDK---TGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCCST---TSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCCCC---CCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 4899999999999998743 5789999999999999999999999999999999999998888999999999974
Q ss_pred --------CCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCccceEEEEEEEEe
Q 003882 457 --------GGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVKKMGELQLAVRFT 510 (789)
Q Consensus 457 --------~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 510 (789)
+ .|++||++.|+|.++. .....||+|...... ....|+|+|++.|.
T Consensus 93 ~~~~~~~~~-----~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~-~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRE-----SDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDK-SAVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSC-----SSEEEEEEEEEGGGCC--SEEEEEEECBCSSTT-CCCCCEEEEEEEEE
T ss_pred cccccccCC-----CCccEEEEEEEHHHCc--CCCCEEEEcccCCCC-CCCceEEEEEEEEE
Confidence 4 7899999999999993 456899999754322 23569999999885
No 18
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.81 E-value=1.7e-19 Score=166.10 Aligned_cols=116 Identities=20% Similarity=0.334 Sum_probs=99.4
Q ss_pred ccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC-----CeeeeeccccCCCCCeeccEEEEE-cc--CC
Q 003882 41 ERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLG-----NYKGKTRHFEKKSNPEWKQVFAFS-KE--KI 112 (789)
Q Consensus 41 ~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~wne~f~f~-~~--~~ 112 (789)
..+.+.|+... +.|.|+|++|+||+. +.+|.+||||+|++. ..++||+++++|.||+|||+|.|. +. ++
T Consensus 9 ~~~~~~~~~~~--~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l 85 (134)
T 2b3r_A 9 GAVKLSVSYRN--GTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETL 85 (134)
T ss_dssp CEEEEEEEEET--TEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHH
T ss_pred EEEEEEEeecC--CEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHh
Confidence 45677777766 999999999999997 678899999999993 357899999999999999999999 64 33
Q ss_pred CCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCC
Q 003882 113 QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 113 ~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 164 (789)
....|.|+|||++.++++++||++.++|.++..+...+ .||+|++..
T Consensus 86 ~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~-----~W~~L~~~~ 132 (134)
T 2b3r_A 86 RQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETV-----KWYQLTAAT 132 (134)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEE-----EEEECBC--
T ss_pred CcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcc-----eeEECCCcc
Confidence 46899999999999999999999999999998765544 999998753
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.4e-19 Score=168.59 Aligned_cols=121 Identities=29% Similarity=0.446 Sum_probs=106.3
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEEcc---C
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN---YKGKTRHFEKKSNPEWKQVFAFSKE---K 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~~~~T~~~~~t~nP~wne~f~f~~~---~ 111 (789)
.|...+++.|.... +.|.|+|++|++|+..+..|.+||||+|++.+ ++++|+++++|.||+|||+|.|.+. +
T Consensus 12 ~G~l~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 89 (141)
T 2d8k_A 12 LGRIQFSVGYNFQE--STLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEK 89 (141)
T ss_dssp CCEEEEEEEECSSS--CCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHH
T ss_pred eeEEEEEEEEeCCC--CEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHH
Confidence 56789999999866 99999999999999999899999999999953 5789999999999999999999852 2
Q ss_pred CCCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCC
Q 003882 112 IQSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRD 165 (789)
Q Consensus 112 ~~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 165 (789)
.....|.|+|||++.++++++||++.|+|.++..+...+ .||+|++...
T Consensus 90 ~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~-----~W~~L~~~~~ 138 (141)
T 2d8k_A 90 VVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQT-----FWKDLKPSGP 138 (141)
T ss_dssp HTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEE-----EEECCEECCC
T ss_pred cccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCcc-----EEEECcCCCC
Confidence 345889999999999999999999999999998875444 8999998653
No 20
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=1.5e-19 Score=165.58 Aligned_cols=115 Identities=23% Similarity=0.491 Sum_probs=97.3
Q ss_pred ccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC-----CeeeeeccccCCCCCeeccEEEEEcc---
Q 003882 39 SSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLG-----NYKGKTRHFEKKSNPEWKQVFAFSKE--- 110 (789)
Q Consensus 39 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~wne~f~f~~~--- 110 (789)
|...+++.|+... +.|.|+|++|+||+..+..|.+||||++++. ..+++|+++++|.||+|||+|.|.+.
T Consensus 5 G~l~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 5 GQLSIKLWFDKVG--HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CEEEEEEEEETTT--TEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred EEEEEEEEEccCC--CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 4678999999887 9999999999999999989999999999993 46889999999999999999999952
Q ss_pred CCCCceEEEEEEeCCCCCC--CceeEEEEEEccccCCCCCCCCCCCCeeEEcc
Q 003882 111 KIQSSVLEVFVRDREIVGR--DDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLE 161 (789)
Q Consensus 111 ~~~~~~l~v~V~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 161 (789)
+.....|.|+|||++.+++ +++||++.++|.++..+. .+ +||+|+
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~-----~W~~Lq 129 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EP-----HWYKLQ 129 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CE-----EEEECC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CC-----ccEECc
Confidence 3346899999999999887 999999999999998754 33 999985
No 21
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=4.2e-20 Score=174.09 Aligned_cols=118 Identities=15% Similarity=0.168 Sum_probs=103.3
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC---e---eeeeccccCCCCCeeccEEEEEccC
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN---Y---KGKTRHFEKKSNPEWKQVFAFSKEK 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~---~---~~~T~~~~~t~nP~wne~f~f~~~~ 111 (789)
.|..++++.|+... +.|.|+|++|+||+++|..|.+||||++++.+ . ++||+++++|+||+|||+|.|.+..
T Consensus 29 ~G~l~~sl~y~~~~--~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 29 ATRIQIALKYDEKN--KQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp CEEEEEEEEEETTT--TEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred cEEEEEEEEEcCCC--CEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 45789999999877 99999999999999999999999999999976 2 6899999999999999999999854
Q ss_pred --CCCceEEEEEEeCCCCCCCceeEEEEEEccccCC-CCCCCCCCCCeeEEccc
Q 003882 112 --IQSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPT-RVPPDSPLAPQWYRLED 162 (789)
Q Consensus 112 --~~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~-~~~~~~~~~~~w~~L~~ 162 (789)
+....|.|+|||+|.++++++||++.|+|.++.. .... .+||+|.+
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~-----~~W~~L~~ 155 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERS-----TRWYNLLS 155 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCE-----EEEEEEBC
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCcc-----ccceEccC
Confidence 2357899999999999999999999999999964 3222 38999863
No 22
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=1.2e-19 Score=169.16 Aligned_cols=121 Identities=22% Similarity=0.454 Sum_probs=105.6
Q ss_pred ccccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC-----CeeeeeccccCCCCCeeccEEEEEc-c
Q 003882 37 WISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLG-----NYKGKTRHFEKKSNPEWKQVFAFSK-E 110 (789)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~wne~f~f~~-~ 110 (789)
..|...+++.|+... +.|.|+|++|+||+..+..+.+||||++++. .++++|+++++|.||+|||+|.|.+ .
T Consensus 6 ~~G~i~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 6 SGGQLSIKLWFDKVG--HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCEEEEEEEEETTT--TEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred cccEEEEEEEEeCCC--CEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCC
Confidence 356789999999877 9999999999999999989999999999993 4678999999999999999999995 2
Q ss_pred --CCCCceEEEEEEeCCCCCC--CceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCC
Q 003882 111 --KIQSSVLEVFVRDREIVGR--DDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRD 165 (789)
Q Consensus 111 --~~~~~~l~v~V~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 165 (789)
+.....|.|+|||++.+++ +++||++.|+|.++..+. .+ .||+|.+...
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~-----~W~~L~~~~~ 136 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EP-----HWYKLQTHDS 136 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EE-----EEEECBCCSS
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CC-----ceEECccccc
Confidence 3345899999999999887 999999999999987653 33 8999998754
No 23
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.80 E-value=3.3e-19 Score=168.56 Aligned_cols=126 Identities=24% Similarity=0.355 Sum_probs=102.1
Q ss_pred CCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC------EEEeeccccCCCCCccccEEEEEEeCCCceEEEEE
Q 003882 377 KQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL------KWVRTRTLVDNFNPKWNEQYTWEVYDPCTVITLGV 450 (789)
Q Consensus 377 ~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~------~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v 450 (789)
.+..|.|+|+|++|+||+.++ ..|.+||||++++++ +.+||+++++|+||+|||.|.|.+......|.|+|
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V 92 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKD---ILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEV 92 (153)
T ss_dssp CTTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCC---CCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEE
Confidence 345689999999999999874 347899999999963 57999999999999999999999988778999999
Q ss_pred EeCCCCCCCCCCCCCccEEEEEECcccccCceE------eeeEeeeecCCCCCccceEEEEEEEEee
Q 003882 451 FDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIY------THSYPLLVLNPSGVKKMGELQLAVRFTC 511 (789)
Q Consensus 451 ~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~------~~~~~L~~~~~~g~~~~G~i~l~~~f~~ 511 (789)
||++.++ +|++||++.|+|.++..+... ..||+|......+ +..|+|+|++.|.|
T Consensus 93 ~d~d~~~-----~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 93 FDENRLT-----RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP 153 (153)
T ss_dssp EECCSSS-----CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred EECCCCc-----CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEeC
Confidence 9999876 889999999999999876532 5899997554322 45699999999865
No 24
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=2.6e-19 Score=168.97 Aligned_cols=119 Identities=27% Similarity=0.398 Sum_probs=105.4
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC---CeeeeeccccCCCCCeeccEEEEEccC--C
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLG---NYKGKTRHFEKKSNPEWKQVFAFSKEK--I 112 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~---~~~~~T~~~~~t~nP~wne~f~f~~~~--~ 112 (789)
.|...+++.|+... +.|.|+|++|+||+..+..+.+||||+|++. .++++|+++++|.||+|||+|.|.+.. .
T Consensus 28 ~G~l~~~l~y~~~~--~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 105 (152)
T 1rsy_A 28 LGKLQYSLDYDFQN--NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 105 (152)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHH
T ss_pred ceEEEEEEEEeCCC--CEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHc
Confidence 45678999999877 9999999999999999988999999999995 357899999999999999999998753 2
Q ss_pred CCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccC
Q 003882 113 QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDR 163 (789)
Q Consensus 113 ~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 163 (789)
....|.|+|||++.++++++||++.|+|.++..+...+ .||+|.+.
T Consensus 106 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~-----~W~~L~~~ 151 (152)
T 1rsy_A 106 GGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTE-----EWRDLQSA 151 (152)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEE-----EEEECBCC
T ss_pred CCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcc-----eEEECCCC
Confidence 46899999999999999999999999999998765544 99999864
No 25
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=5.8e-19 Score=163.49 Aligned_cols=118 Identities=17% Similarity=0.313 Sum_probs=102.1
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC----eeeeeccccCCCCCeeccEEEEEccC--
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN----YKGKTRHFEKKSNPEWKQVFAFSKEK-- 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~----~~~~T~~~~~t~nP~wne~f~f~~~~-- 111 (789)
.|...+++.|+... +.|.|+|++|++ +|..|.+||||+|++.+ .+++|+++++|+||+|||+|.|.+..
T Consensus 12 ~G~l~~sl~y~~~~--~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~ 86 (138)
T 1wfm_A 12 APKLHYCLDYDCQK--AELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEE 86 (138)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTS
T ss_pred ceEEEEEEEEeCCC--CEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHH
Confidence 46789999999877 999999999994 57788999999999953 35799999999999999999999853
Q ss_pred CCCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCC
Q 003882 112 IQSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRD 165 (789)
Q Consensus 112 ~~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 165 (789)
.....|.|+|||+|.+++|++||++.++|.++......+ .|++|.+...
T Consensus 87 l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~-----~W~~L~~~~~ 135 (138)
T 1wfm_A 87 LPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAA-----QWGELKTSGP 135 (138)
T ss_dssp STTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCC-----EEEECCCCSC
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCccccc-----ceeeCcCCCc
Confidence 346799999999999999999999999999997654444 9999998653
No 26
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.79 E-value=1.5e-19 Score=169.75 Aligned_cols=122 Identities=18% Similarity=0.234 Sum_probs=105.3
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCC-CCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEccC
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNP-VSGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFSKEK 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~-~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~~~~ 111 (789)
.|...+++.|+... +.|.|+|++|+||+..+ ..|.+||||++++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 9 ~G~l~~sl~y~~~~--~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 86 (148)
T 3fdw_A 9 TGRIAFSLKYEQQT--QSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPE 86 (148)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCS
T ss_pred ceEEEEEEEEeCCC--CEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeCh
Confidence 35678999999877 99999999999999888 578999999999974 37899999999999999999999854
Q ss_pred C--CCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCC
Q 003882 112 I--QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDD 166 (789)
Q Consensus 112 ~--~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~ 166 (789)
. ....|.|+|||++.++++++||++.++|.++..+...+ .||+|+++...
T Consensus 87 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~-----~W~~L~~~~~~ 138 (148)
T 3fdw_A 87 SLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLD-----HCLPLHGKISA 138 (148)
T ss_dssp TTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSE-----EEEECBCC---
T ss_pred hHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCcc-----ceEECcCcccc
Confidence 3 35689999999999999999999999999998765554 99999987644
No 27
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.79 E-value=4.5e-19 Score=163.87 Aligned_cols=119 Identities=20% Similarity=0.288 Sum_probs=101.6
Q ss_pred ccEEEEEEEEccCCCCCccCCC--------CCCcCcEEEEEECCEE-EeeccccCCCCCccccEEEEEEeCCCceEEEEE
Q 003882 380 IGILEVGILSAQGLLPMKTRDG--------RGTTDAYCVAKYGLKW-VRTRTLVDNFNPKWNEQYTWEVYDPCTVITLGV 450 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~--------~~~~dpyv~v~~~~~~-~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v 450 (789)
.|.|+|+|++|+||+++|.... .+.+||||++.++++. .+|+++++|+||+|||.|.|.+.+. ..|.|+|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V 83 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEE
Confidence 3899999999999998864210 1349999999998765 7999999999999999999999875 8999999
Q ss_pred EeCCCCCCCCCCCCCccEEEEEECcccccC--ceEeeeEeeeecCCCCCccceEEEEEEEEeec
Q 003882 451 FDNCHLGGSGTKPDSRIGKVRIRLSTLEAD--RIYTHSYPLLVLNPSGVKKMGELQLAVRFTCL 512 (789)
Q Consensus 451 ~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~~ 512 (789)
||+|.++ +|++||++.|+|.++..+ ...+.|++|. +.|+|+|+++|...
T Consensus 84 ~d~d~~~-----~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 84 FHDAPIG-----YDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSGS 134 (136)
T ss_dssp EECCSSS-----SCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEEE
T ss_pred EeCCCCC-----CCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEec
Confidence 9999876 799999999999999864 3468999985 35999999999764
No 28
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.79 E-value=1.3e-18 Score=159.89 Aligned_cols=120 Identities=15% Similarity=0.256 Sum_probs=101.7
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC--eeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeCCCCCC-
Q 003882 53 MFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN--YKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIVGR- 129 (789)
Q Consensus 53 ~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~--~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~~~- 129 (789)
...|.|+|++|++|+..|..|.+||||++++++ +.++|+++++|+||+|||+|.|.+... ..|.|+|||++.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 467999999999999999999999999999985 788999999999999999999998765 359999999999876
Q ss_pred --CceeEEEEEEccccCCC-CCCCCCCCCeeEEcccCCC--CCccceEEEEEEEE
Q 003882 130 --DDYIGKVVFDMNEVPTR-VPPDSPLAPQWYRLEDRRD--DRKVKGEVMLAVWI 179 (789)
Q Consensus 130 --d~~lG~~~i~l~~l~~~-~~~~~~~~~~w~~L~~~~~--~~~~~G~l~l~~~~ 179 (789)
|++||++.+++..+... .... .|++|....+ .....|+|.+++..
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~-----~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGY-----QRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCC-----EEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccccCc-----EEEeeeecCCCCCCceeEEEEEEEEc
Confidence 89999999999988332 2222 8999987632 23468999998864
No 29
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=3.5e-19 Score=166.06 Aligned_cols=120 Identities=27% Similarity=0.316 Sum_probs=103.5
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEccC-
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFSKEK- 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~~~~- 111 (789)
.|...+++.|+... +.|.|+|++|+||+.++..| +||||+|++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 10 ~G~l~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 86 (142)
T 2dmg_A 10 LGQIQLTIRHSSQR--NKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLP 86 (142)
T ss_dssp SCEEEEEEEEETTT--TEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHH
T ss_pred cceEEEEEEEeCCC--CEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHH
Confidence 56788999998876 99999999999999999888 99999999954 57899999999999999999999843
Q ss_pred -CCCceEEEEEEeCCCCCC--CceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCC
Q 003882 112 -IQSSVLEVFVRDREIVGR--DDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRD 165 (789)
Q Consensus 112 -~~~~~l~v~V~d~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 165 (789)
+....|.|+|||++.+++ +++||++.|+|.++......+ .||+|.+..+
T Consensus 87 ~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~-----~W~~L~~~~~ 138 (142)
T 2dmg_A 87 EVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWT-----QWYDLTEDSG 138 (142)
T ss_dssp HHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBC-----CBCCCBCSCS
T ss_pred HhCcCEEEEEEEECCCccccCCcEEEEEEEeccccccccccc-----ceeeccCCCC
Confidence 234699999999998764 579999999999998765444 8999998754
No 30
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.78 E-value=1.3e-18 Score=168.37 Aligned_cols=126 Identities=24% Similarity=0.360 Sum_probs=100.6
Q ss_pred CCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC------EEEeeccccCCCCCccccEEEEEEeCCCceEEEEEE
Q 003882 378 QPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL------KWVRTRTLVDNFNPKWNEQYTWEVYDPCTVITLGVF 451 (789)
Q Consensus 378 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~------~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~ 451 (789)
...|.|+|+|++|+||+.++ ..|.+||||+|.+++ +.++|+++++++||.|||.|.|.+......|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d---~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKD---ILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcC---CCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEE
Confidence 34689999999999999874 357899999999965 679999999999999999999999977789999999
Q ss_pred eCCCCCCCCCCCCCccEEEEEECcccccCceE-e-----eeEeeeecCCCCCccceEEEEEEEEeec
Q 003882 452 DNCHLGGSGTKPDSRIGKVRIRLSTLEADRIY-T-----HSYPLLVLNPSGVKKMGELQLAVRFTCL 512 (789)
Q Consensus 452 d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~g~~~~G~i~l~~~f~~~ 512 (789)
|++.++ .|++||++.|+|.++..+... . .||+|......+ +..|+|+|+++|.|.
T Consensus 82 d~d~~~-----~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENRLT-----RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC---------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC-
T ss_pred ECCCCC-----CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEeC
Confidence 999876 889999999999999876533 2 799997654333 346999999999876
No 31
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=7.2e-19 Score=168.74 Aligned_cols=127 Identities=18% Similarity=0.171 Sum_probs=104.8
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeCCCCCCCce
Q 003882 53 MFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIVGRDDY 132 (789)
Q Consensus 53 ~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~~~d~~ 132 (789)
.+.|.|+|++|++|+..+..+.+||||+|+++++++||+++++|+||+|||+|.|.+.. ...|.|+|||++.+++|++
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~dd~ 112 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSDVL 112 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCCEE
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCCce
Confidence 37899999999999944434559999999999999999999999999999999999854 6899999999999999999
Q ss_pred eEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEee
Q 003882 133 IGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGT 181 (789)
Q Consensus 133 lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 181 (789)
||++.++|.++.............|++|....+.....|+|.+++.+..
T Consensus 113 lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 113 LGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp EEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred EEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeee
Confidence 9999999999876432111111379999987544467899999988764
No 32
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1.9e-19 Score=167.97 Aligned_cols=117 Identities=27% Similarity=0.480 Sum_probs=102.4
Q ss_pred ccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCe--------------eeeeccccCCCCCeeccE
Q 003882 39 SSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNY--------------KGKTRHFEKKSNPEWKQV 104 (789)
Q Consensus 39 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~--------------~~~T~~~~~t~nP~wne~ 104 (789)
|...+++.|+ . +.|.|+|++|+||+.++..|.+||||++++.+. +++|+++++|.||+|||+
T Consensus 7 G~i~~~l~y~--~--~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~ 82 (142)
T 1rh8_A 7 GEIQLQINYD--L--GNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQT 82 (142)
T ss_dssp CEEEEEEEEE--T--TEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEE
T ss_pred eEEEEEEEEc--C--CEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCE
Confidence 4678999998 3 789999999999999998999999999999873 479999999999999999
Q ss_pred EEEE-cc--CCCCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCC
Q 003882 105 FAFS-KE--KIQSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 105 f~f~-~~--~~~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 164 (789)
|.|. +. ++....|.|+|||++.++++++||++.|+|.++......+ .||+|++..
T Consensus 83 f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~-----~W~~L~~~~ 140 (142)
T 1rh8_A 83 VIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTP-----RWYPLKEQT 140 (142)
T ss_dssp EEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCC-----EEEECBCCC
T ss_pred EEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCC-----eEEECCccC
Confidence 9997 43 3346899999999999999999999999999987755444 999998764
No 33
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.78 E-value=7.8e-19 Score=162.27 Aligned_cols=117 Identities=21% Similarity=0.356 Sum_probs=100.2
Q ss_pred eeEEEEEEEEeeCCCCCCCCCC-----------CCcEEEEEECCee-eeeccccCCCCCeeccEEEEEccCCCCceEEEE
Q 003882 53 MFYLYVRVEKARDLPTNPVSGS-----------CDPYVEVKLGNYK-GKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVF 120 (789)
Q Consensus 53 ~~~L~V~v~~a~~L~~~~~~g~-----------~dpyv~v~~~~~~-~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~ 120 (789)
.+.|.|+|++|+||++.|..+. +||||++.++++. .+|+++.+|.||+|||+|.|.+.+. ..|.|+
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~~ 82 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEEE
Confidence 3889999999999998875433 9999999998865 6999999999999999999998664 799999
Q ss_pred EEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEee
Q 003882 121 VRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGT 181 (789)
Q Consensus 121 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 181 (789)
|||++.+++|++||++.+++.++..+... ....|++|++ .|+|++++.|..
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~~---~~~~w~~L~~-------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGSR---HFEDWIDLEP-------EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTCS---EEEEEEECBS-------SCEEEEEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCCC---CccEEEEcCC-------CeEEEEEEEEEe
Confidence 99999999999999999999999875321 1238999864 589999998864
No 34
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.78 E-value=9.4e-19 Score=165.22 Aligned_cols=118 Identities=25% Similarity=0.388 Sum_probs=102.8
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEc--c
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFSK--E 110 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~~--~ 110 (789)
.|...+++.|+... +.|.|+|++|+||+..+ .|.+||||+|++.+ .+++|+++++|.||+|||+|.|.+ .
T Consensus 13 ~G~~~lsL~y~~~~--~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 89 (153)
T 3fbk_A 13 QGAGQLRLSIDAQD--RVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEE 89 (153)
T ss_dssp CCCCEEEEEEEESS--SEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGG
T ss_pred CCEEEEEEEEECCC--CEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccH
Confidence 45779999999988 99999999999999998 68999999999943 468999999999999999999998 4
Q ss_pred CCCCceEEEEEEeCCCCCC-CceeEEEEEEccccCC-CCCCCCCCCCeeEEcccCC
Q 003882 111 KIQSSVLEVFVRDREIVGR-DDYIGKVVFDMNEVPT-RVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 111 ~~~~~~l~v~V~d~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~~~w~~L~~~~ 164 (789)
+.. ..|.|+|||++.+++ |++||++.++|.++.. +.... .||+|.+..
T Consensus 90 ~~~-~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~-----~W~~L~~~~ 139 (153)
T 3fbk_A 90 DDQ-KRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEIS-----GWYYLLGEH 139 (153)
T ss_dssp GTT-SEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEE-----EEEECBCTT
T ss_pred HhC-CEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccc-----cEEECCChh
Confidence 443 569999999999877 9999999999999985 44333 899999865
No 35
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.77 E-value=8.5e-19 Score=163.43 Aligned_cols=119 Identities=22% Similarity=0.387 Sum_probs=104.5
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEE-ccC
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFS-KEK 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~-~~~ 111 (789)
.|...+++.|+... +.|.|+|++|++|+..+..|.+||||+|++.+ .+++|+++++|.||+|||+|.|. +..
T Consensus 15 ~G~l~~~l~y~~~~--~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 92 (142)
T 2chd_A 15 LGALEFSLLYDQDN--SNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITE 92 (142)
T ss_dssp CCEEEEEEEEEGGG--TEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCH
T ss_pred cceEEEEEEEeCCC--CEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCH
Confidence 45688999999766 99999999999999999899999999999976 67899999999999999999998 532
Q ss_pred --CCCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccC
Q 003882 112 --IQSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDR 163 (789)
Q Consensus 112 --~~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 163 (789)
.....|.|+|||++.++++++||++.|+|.++..+.... .|++|+.+
T Consensus 93 ~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~-----~~~~L~~p 141 (142)
T 2chd_A 93 EDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKN-----FNICLERV 141 (142)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEE-----EEEECBCC
T ss_pred HHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccE-----EEEecccC
Confidence 224789999999999999999999999999999876554 78888764
No 36
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=7.3e-19 Score=160.28 Aligned_cols=117 Identities=18% Similarity=0.240 Sum_probs=98.5
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC---EEEeeccccCCCCCccccEEEEEEeC-CCceEEEEEEeCCC
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL---KWVRTRTLVDNFNPKWNEQYTWEVYD-PCTVITLGVFDNCH 455 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~---~~~~T~~~~~t~~P~wne~~~f~v~~-~~~~l~v~v~d~~~ 455 (789)
.|.|.|+|++|+||+.++..+..|.+||||++++++ +.+||+++++++||+|||.|.|.+.. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 379999999999999853223347899999999975 78999999999999999999999964 46799999999997
Q ss_pred CCCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCccceEEEEEEE
Q 003882 456 LGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVKKMGELQLAVR 508 (789)
Q Consensus 456 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~ 508 (789)
. +|++||++.|+|.++..+.....|++|.. ...|.|++++.
T Consensus 82 ~------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le 122 (126)
T 1rlw_A 82 V------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLE 122 (126)
T ss_dssp S------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEE
T ss_pred C------CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEE
Confidence 5 58899999999999999999999999962 13466666654
No 37
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.7e-18 Score=157.86 Aligned_cols=114 Identities=23% Similarity=0.393 Sum_probs=98.4
Q ss_pred eEEEEEEEEeeCCCCC---CCCCCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeCCCC
Q 003882 54 FYLYVRVEKARDLPTN---PVSGSCDPYVEVKLGN---YKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIV 127 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~---~~~g~~dpyv~v~~~~---~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~ 127 (789)
+.|.|+|++|+||+.+ +..|.+||||++++++ ++++|+++++|.||+|||+|.|.+.......|.|+|||++.+
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~ 82 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYV 82 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCC
Confidence 7899999999999984 5568999999999996 688999999999999999999999666678999999999987
Q ss_pred CCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEE
Q 003882 128 GRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVW 178 (789)
Q Consensus 128 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~ 178 (789)
++++||++.++|.++..+...+ .|++|.+. ..|.|.+++.
T Consensus 83 -~~~~iG~~~i~l~~l~~~~~~~-----~~~~L~~~-----~~g~i~~~le 122 (126)
T 1rlw_A 83 -MDETLGTATFTVSSMKVGEKKE-----VPFIFNQV-----TEMVLEMSLE 122 (126)
T ss_dssp -CCEEEEEEEEEGGGSCTTCEEE-----EEEEETTT-----EEEEEEEEEE
T ss_pred -CCceeEEEEEEHHHccCCCcEE-----EEEEcCCC-----ceEEEEEEEE
Confidence 5999999999999998766555 89999762 3566666653
No 38
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=2.4e-18 Score=159.49 Aligned_cols=121 Identities=21% Similarity=0.290 Sum_probs=103.9
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCC-CCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEE-ccC-
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVS-GSCDPYVEVKLGN---YKGKTRHFEKKSNPEWKQVFAFS-KEK- 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~-g~~dpyv~v~~~~---~~~~T~~~~~t~nP~wne~f~f~-~~~- 111 (789)
.|...+++.|+... +.|.|+|++|+||+.++.. +.+||||++++.+ ++++|+++++|.||+|||+|.|. +..
T Consensus 8 ~G~l~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~ 85 (138)
T 1ugk_A 8 LGTLFFSLEYNFER--KAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYT 85 (138)
T ss_dssp CCEEEEEEEEEGGG--TEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCST
T ss_pred cEEEEEEEEEECCC--CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHH
Confidence 46788999998876 9999999999999999984 8999999999974 68899999999999999999996 532
Q ss_pred -CCCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCC
Q 003882 112 -IQSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 112 -~~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 164 (789)
.....|.|+|||++.++++++||++.|+|.++....... ..|++|+...
T Consensus 86 ~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~----~~~~~l~~~~ 135 (138)
T 1ugk_A 86 QIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKM----LMNREIISGP 135 (138)
T ss_dssp TGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCE----EEEEECBSSS
T ss_pred HhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcc----hhhhhhhcCC
Confidence 345799999999999999999999999999998764321 2679998754
No 39
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=1.7e-18 Score=162.36 Aligned_cols=120 Identities=28% Similarity=0.330 Sum_probs=103.4
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCC-CC------CCCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEE
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTN-PV------SGSCDPYVEVKLGN---YKGKTRHFEKKSNPEWKQVFAF 107 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~-~~------~g~~dpyv~v~~~~---~~~~T~~~~~t~nP~wne~f~f 107 (789)
.|...+++.|+... +.|.|+|++|+||+.. +. .+.+||||+|++.+ ++++|+++++|.||+|||+|.|
T Consensus 12 ~G~l~~~l~y~~~~--~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f 89 (147)
T 2enp_A 12 LGMLHFSTQYDLLH--NHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTF 89 (147)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEE
T ss_pred ceEEEEEEEEcCCC--CEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEE
Confidence 56789999999877 9999999999999984 33 35899999999974 5789999999999999999999
Q ss_pred EccCC--CCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCC
Q 003882 108 SKEKI--QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 108 ~~~~~--~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 164 (789)
.+... ....|.|+|||++.++++++||++.|+|.++....... .|++|++..
T Consensus 90 ~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~-----~w~~L~~~~ 143 (147)
T 2enp_A 90 EIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGH-----WWKALIPSG 143 (147)
T ss_dssp CCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCC-----EEECCBCCC
T ss_pred EeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCcc-----EEEEeecCC
Confidence 98532 34689999999999999999999999999998765444 899998754
No 40
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.76 E-value=1.5e-18 Score=166.87 Aligned_cols=117 Identities=26% Similarity=0.307 Sum_probs=101.5
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCC-CCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEccC
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPV-SGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFSKEK 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~-~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~~~~ 111 (789)
.|...+++.|. .+.|.|+|++|+||+.+|. .|.+||||+|++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 18 ~G~l~~~l~y~----~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (171)
T 2q3x_A 18 MGDIQIGMEDK----KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP 93 (171)
T ss_dssp CCEEEEEEEEE----TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC
T ss_pred ccEEEEEEEEC----CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC
Confidence 45678888883 3889999999999999985 78999999999975 27899999999999999999999854
Q ss_pred CCCceEEEEEE-eCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCC
Q 003882 112 IQSSVLEVFVR-DREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 112 ~~~~~l~v~V~-d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 164 (789)
. ...|.|+|| |++.++++++||++.|+|.++..+...+ .||+|+...
T Consensus 94 ~-~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~-----~W~~L~~~~ 141 (171)
T 2q3x_A 94 Q-GKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVI-----GWYKLFPPS 141 (171)
T ss_dssp T-TEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEE-----EEEECBCGG
T ss_pred C-CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcc-----eeEECCCcc
Confidence 3 689999999 9999999999999999999998765544 999998865
No 41
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=2.6e-18 Score=161.51 Aligned_cols=116 Identities=28% Similarity=0.489 Sum_probs=100.8
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEccCC
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFSKEKI 112 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~~~~~ 112 (789)
.|...+++.|. . +.|.|+|++|+||+..+..+.+||||+|++.+ .+++|+++++|.||+|||+|.|.+...
T Consensus 19 ~G~l~~~l~~~--~--~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 94 (149)
T 1a25_A 19 RGRIYIQAHID--R--EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKES 94 (149)
T ss_dssp TCEEEEEEEES--S--SEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSG
T ss_pred ceEEEEEEEec--C--CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccc
Confidence 45667777774 3 78999999999999999899999999999974 578999999999999999999998653
Q ss_pred -CCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccC
Q 003882 113 -QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDR 163 (789)
Q Consensus 113 -~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 163 (789)
....|.|+|||++.++++++||++.|+|.++..+. .+ .||+|.+.
T Consensus 95 ~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-~~-----~W~~L~~~ 140 (149)
T 1a25_A 95 DKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VD-----GWFKLLSQ 140 (149)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCC-EE-----EEEECBCH
T ss_pred cCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCc-cC-----CeEEccCC
Confidence 24689999999999999999999999999998752 33 89999875
No 42
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.76 E-value=2.2e-18 Score=159.57 Aligned_cols=116 Identities=27% Similarity=0.464 Sum_probs=101.0
Q ss_pred ccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC-----CeeeeeccccCCCCCeeccEEEEEccCC-
Q 003882 39 SSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLG-----NYKGKTRHFEKKSNPEWKQVFAFSKEKI- 112 (789)
Q Consensus 39 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~wne~f~f~~~~~- 112 (789)
|...++++| .. +.|.|+|++|++|+..+..|.+||||++++. ...++|+++++|.||+|||+|.|.+...
T Consensus 5 G~l~~~l~~--~~--~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~ 80 (137)
T 3rdl_A 5 GRIYLKAEV--TD--EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSD 80 (137)
T ss_dssp CEEEEEEEE--ET--TEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred eEEEEEEEE--cC--CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchh
Confidence 467888888 33 8999999999999999989999999999994 4678999999999999999999998543
Q ss_pred CCceEEEEEEeCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCC
Q 003882 113 QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 113 ~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 164 (789)
....|.|+|||++.++++++||++.++|.++.... .+ +||+|.+..
T Consensus 81 ~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~-----~W~~L~~~~ 126 (137)
T 3rdl_A 81 KDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-AS-----GWYKLLNQE 126 (137)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EE-----EEEECBCHH
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cC-----ceEECcCcc
Confidence 24689999999999999999999999999997654 33 999998754
No 43
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.75 E-value=5.2e-18 Score=157.29 Aligned_cols=104 Identities=28% Similarity=0.408 Sum_probs=93.1
Q ss_pred ccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEccCC-
Q 003882 39 SSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFSKEKI- 112 (789)
Q Consensus 39 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~~~~~- 112 (789)
|...+++.|+... +.|.|+|++|+||+..+..|.+||||++++.+ .+++|+++++|.||+|||+|.|.+...
T Consensus 3 G~l~~sl~y~~~~--~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~ 80 (138)
T 3n5a_A 3 GELLLSLCYNPSA--NSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK 80 (138)
T ss_dssp CEEEEEEEEETTT--TEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGG
T ss_pred cEEEEEEEEcCCC--CeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhh
Confidence 4678899998877 99999999999999999889999999999975 478999999999999999999998543
Q ss_pred -CCceEEEEEEeCCCCCCCceeEEEEEEccccC
Q 003882 113 -QSSVLEVFVRDREIVGRDDYIGKVVFDMNEVP 144 (789)
Q Consensus 113 -~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~ 144 (789)
....|.|+|||++.+++|++||++.|++.++.
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 34789999999999999999999999998754
No 44
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.75 E-value=8.9e-18 Score=159.71 Aligned_cols=122 Identities=27% Similarity=0.326 Sum_probs=101.9
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEccCC
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFSKEKI 112 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~~~~~ 112 (789)
.|...+++.|.... +.|.|+|++|+||+..+..|.+||||+|++.+ .+++|+++++|.||+|||+|.|.+...
T Consensus 11 ~G~l~~~l~y~~~~--~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 88 (159)
T 1tjx_A 11 LGDICFSLRYVPTA--GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 88 (159)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CCeEEEEEEEcCCC--CEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHH
Confidence 45788999998877 99999999999999999889999999999963 467999999999999999999998533
Q ss_pred --CCceEEEEEEeCCCCCCCceeEEEEEEcccc----------CCCCCCCCCCCCeeEEcccCC
Q 003882 113 --QSSVLEVFVRDREIVGRDDYIGKVVFDMNEV----------PTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 113 --~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l----------~~~~~~~~~~~~~w~~L~~~~ 164 (789)
....|.|+|||++.++++++||++.|++..+ .... .....+||+|....
T Consensus 89 ~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~---~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 89 QIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANP---RRPIAQWHTLQVEE 149 (159)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHST---TCCEEEEEECBCHH
T ss_pred HhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCC---CCeeeeEEECcCcc
Confidence 3568999999999999999999999999854 2111 11223899998753
No 45
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.74 E-value=9.8e-18 Score=160.60 Aligned_cols=105 Identities=24% Similarity=0.323 Sum_probs=94.4
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eeeeeccccCCCCCeeccEEEEEccC-
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN-----YKGKTRHFEKKSNPEWKQVFAFSKEK- 111 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~~~~- 111 (789)
.|...+++.|.... +.|.|+|++|+||+..+..|.+||||+|++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 23 ~G~l~~~l~y~~~~--~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 100 (166)
T 2cm5_A 23 RGKILVSLMYSTQQ--GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHS 100 (166)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred cceEEEEEEEECCC--CEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchH
Confidence 35678899998876 99999999999999999899999999999986 57899999999999999999999854
Q ss_pred -CCCceEEEEEEeCCCCCCCceeEEEEEEccccC
Q 003882 112 -IQSSVLEVFVRDREIVGRDDYIGKVVFDMNEVP 144 (789)
Q Consensus 112 -~~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~l~ 144 (789)
+....|.|+|||++.++++++||++.|++..+.
T Consensus 101 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 101 DLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred hcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 235799999999999999999999999999753
No 46
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.74 E-value=8e-18 Score=158.95 Aligned_cols=103 Identities=31% Similarity=0.378 Sum_probs=87.2
Q ss_pred cccccceeeecccCceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC--Ce---eeeeccccCCCCCeeccEEEEEccCC
Q 003882 38 ISSERATSTYDLVEQMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLG--NY---KGKTRHFEKKSNPEWKQVFAFSKEKI 112 (789)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~--~~---~~~T~~~~~t~nP~wne~f~f~~~~~ 112 (789)
.|...+++.|+... +.|.|+|++|+||+..+..|.+||||+|++. +. +++|+++++|.||+|||+|.|.+...
T Consensus 16 ~G~l~~~l~y~~~~--~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 93 (153)
T 1w15_A 16 RGELLVSLCYQSTT--NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCE 93 (153)
T ss_dssp CCEEEEEEEEETTT--TEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSS
T ss_pred ccEEEEEEEEcCCC--CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHH
Confidence 46788999998877 9999999999999999988999999999994 33 67999999999999999999998543
Q ss_pred --CCceEEEEEEeCCCCCCCceeEEEEEEccc
Q 003882 113 --QSSVLEVFVRDREIVGRDDYIGKVVFDMNE 142 (789)
Q Consensus 113 --~~~~l~v~V~d~~~~~~d~~lG~~~i~l~~ 142 (789)
....|.|+|||++.++++++||++.|++..
T Consensus 94 ~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 94 SLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp SSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred HhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 357899999999999999999999999988
No 47
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.3e-17 Score=157.32 Aligned_cols=119 Identities=21% Similarity=0.292 Sum_probs=102.6
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE---CCE
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY---GLK 416 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~---~~~ 416 (789)
...|+|++.+.+. +..+.|.|+|++|+||+.++ ..+.+||||+|++ +.+
T Consensus 26 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~ 77 (152)
T 1rsy_A 26 EKLGKLQYSLDYD-------------------------FQNNQLLVGIIQAAELPALD---MGGTSDPYVKVFLLPDKKK 77 (152)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCS---TTSCCCEEEEEEEETTCCS
T ss_pred CCceEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCcc---CCCCcCeEEEEEEEcCCCc
Confidence 3478988888643 23379999999999999874 4578999999999 456
Q ss_pred EEeeccccCCCCCccccEEEEEEeC---CCceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeee
Q 003882 417 WVRTRTLVDNFNPKWNEQYTWEVYD---PCTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLV 491 (789)
Q Consensus 417 ~~~T~~~~~t~~P~wne~~~f~v~~---~~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 491 (789)
.+||+++++++||+|||.|.|.+.. ....|.|+|||++.++ +|++||++.|+|.++..+.....||+|..
T Consensus 78 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~-----~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 78 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS-----KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS-----CCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred eEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCC-----CCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 7999999999999999999998864 3579999999999876 78999999999999998888899999963
No 48
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1.7e-17 Score=159.15 Aligned_cols=124 Identities=16% Similarity=0.159 Sum_probs=102.4
Q ss_pred CccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCCCceEEEEEEeCCCCCC
Q 003882 379 PIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLVDNFNPKWNEQYTWEVYDPCTVITLGVFDNCHLGG 458 (789)
Q Consensus 379 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~~ 458 (789)
..+.|+|+|++|++|+..+. .+.+||||+|+++++.+||+++++|+||+|||.|.|.+. +...|.|+|||+|.++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~---~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~- 108 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKN---WFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLK- 108 (173)
T ss_dssp CCEEEEEEEEEEEECCCC-----CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSS-
T ss_pred CceEEEEEEEEeECCCCccc---CCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCC-
Confidence 45799999999999984432 234999999999999999999999999999999999985 5889999999999886
Q ss_pred CCCCCCCccEEEEEECcccccCc-----eEeeeEeeeecCCCCCccceEEEEEEEEeec
Q 003882 459 SGTKPDSRIGKVRIRLSTLEADR-----IYTHSYPLLVLNPSGVKKMGELQLAVRFTCL 512 (789)
Q Consensus 459 ~~~~~d~~lG~~~i~l~~l~~~~-----~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~~ 512 (789)
.|++||++.|+|.++..+. ....|++|...+. +.+..|+|.+.+.+.+.
T Consensus 109 ----~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~-~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 109 ----SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE-PTETIGDLSICLDGLQL 162 (173)
T ss_dssp ----CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC-TTSEEEEEEEEEESEEC
T ss_pred ----CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC-CCcccEEEEEEEeeeec
Confidence 8899999999999987431 2367999986532 33457999999887643
No 49
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=3.2e-17 Score=152.48 Aligned_cols=120 Identities=25% Similarity=0.320 Sum_probs=102.8
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEEC---CE
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYG---LK 416 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~---~~ 416 (789)
...|+|.+.+.+. +..+.|.|+|++|+||+.++ ..+.+||||++++. .+
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~ 61 (141)
T 2d8k_A 10 ENLGRIQFSVGYN-------------------------FQESTLTVKIMKAQELPAKD---FSGTSDPFVKIYLLPDKKH 61 (141)
T ss_dssp CCCCEEEEEEEEC-------------------------SSSCCEEEEEEEEESCCCCS---SSSCCCEEEEEEEESCCSS
T ss_pred ceeeEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCCC---CCCCCCcEEEEEEECCCCc
Confidence 3579998888653 23479999999999999874 35789999999993 46
Q ss_pred EEeeccccCCCCCccccEEEEEEeC----CCceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeec
Q 003882 417 WVRTRTLVDNFNPKWNEQYTWEVYD----PCTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVL 492 (789)
Q Consensus 417 ~~~T~~~~~t~~P~wne~~~f~v~~----~~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 492 (789)
.+||+++++++||+|||.|.|.+.. ....|.|+|||++.++ +|++||++.|+|.++..+.....||+|...
T Consensus 62 ~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~-----~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 62 KLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFS-----RNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSS-----SCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred cEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCC-----CCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 8999999999999999999998642 3578999999999876 789999999999999988888999999754
No 50
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.73 E-value=2e-17 Score=152.01 Aligned_cols=123 Identities=20% Similarity=0.252 Sum_probs=98.1
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC--EEEeeccccCCCCCccccEEEEEEeCCCceEEEEEEeCCCCCC
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL--KWVRTRTLVDNFNPKWNEQYTWEVYDPCTVITLGVFDNCHLGG 458 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~--~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~~ 458 (789)
..|+|+|++|++|+++| ..|.+||||++.+++ +.++|+++++|+||+|||.|.|.+..+. .|.|+|||++.++
T Consensus 5 ~~L~V~v~~a~~L~~~d---~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~- 79 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKD---FFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIH- 79 (132)
T ss_dssp EEEEEEEEEEESCCCCS---TTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTT-
T ss_pred EEEEEEEEEeECCCCCC---CCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCC-
Confidence 58999999999999874 457899999999964 7899999999999999999999998754 4999999999874
Q ss_pred CCCCCCCccEEEEEECcccc-cCceEeeeEeeeecCCC-CCccceEEEEEEEE
Q 003882 459 SGTKPDSRIGKVRIRLSTLE-ADRIYTHSYPLLVLNPS-GVKKMGELQLAVRF 509 (789)
Q Consensus 459 ~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~~~~~~-g~~~~G~i~l~~~f 509 (789)
....|++||.+.|++.++. .......|++|....+. ..+..|+|++++..
T Consensus 80 -~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 -KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp -SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred -CCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 0112799999999999983 23333578998764322 22347999998764
No 51
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=6.8e-18 Score=158.43 Aligned_cols=122 Identities=18% Similarity=0.276 Sum_probs=103.3
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEEC-----
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYG----- 414 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~----- 414 (789)
...|+|.+.+.+. +..|.|.|+|++|+||+.++. ..+.+||||++.++
T Consensus 7 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~L~~~d~--~~~~~dpyv~v~l~~~~~~ 59 (148)
T 3fdw_A 7 FVTGRIAFSLKYE-------------------------QQTQSLVVHVKECHQLAYADE--AKKRSNPYVKTYLLPDKSR 59 (148)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCSBT--TTTBCCEEEEEEEETCCSG
T ss_pred ccceEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCccc--CCCCCCeEEEEEEEcCCcc
Confidence 4579999988753 234799999999999998752 35789999999995
Q ss_pred CEEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeee
Q 003882 415 LKWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLV 491 (789)
Q Consensus 415 ~~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 491 (789)
...++|+++++|+||+|||.|.|.+... ...|.|+|||+|.++ +|++||++.|+|.++..++....||+|..
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~-----~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG-----RNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG-----CEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc-----CCcEEEEEEEEcccccccCCccceEECcC
Confidence 3479999999999999999999998753 457999999999876 78999999999999988777789999975
Q ss_pred cC
Q 003882 492 LN 493 (789)
Q Consensus 492 ~~ 493 (789)
+.
T Consensus 135 ~~ 136 (148)
T 3fdw_A 135 KI 136 (148)
T ss_dssp C-
T ss_pred cc
Confidence 43
No 52
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.72 E-value=1.2e-17 Score=157.25 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=90.5
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC------EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEE
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL------KWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGV 450 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~------~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v 450 (789)
.+.|+|.|++|+||++++ ..|.+||||++++.+ .++||+++++|+||+|||.|.|.+... ...|.|+|
T Consensus 42 ~~~L~V~Vi~a~~L~~~d---~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V 118 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALL---QQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDV 118 (155)
T ss_dssp TTEEEEEEEEEECGGGTC---CSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEE
T ss_pred CCEEEEEEEEccCcCCcc---cCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEE
Confidence 479999999999999884 468899999999954 279999999999999999999998752 56899999
Q ss_pred EeCCCCCCCCCCCCCccEEEEEECcccc-cCceEeeeEeee
Q 003882 451 FDNCHLGGSGTKPDSRIGKVRIRLSTLE-ADRIYTHSYPLL 490 (789)
Q Consensus 451 ~d~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~ 490 (789)
||+|.++ ++++||.+.|+|.++. .+....+||+|.
T Consensus 119 ~d~d~~~-----~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 119 CTTDRSH-----LEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEECTTS-----CEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EECCCCC-----CCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999986 8899999999999996 366778999985
No 53
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.72 E-value=2.2e-17 Score=154.05 Aligned_cols=119 Identities=21% Similarity=0.314 Sum_probs=103.0
Q ss_pred ccccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE---CC
Q 003882 339 LKFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY---GL 415 (789)
Q Consensus 339 ~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~---~~ 415 (789)
....|+|.+.+.+. +..+.|.|+|++|+||+.++. .+.+||||++.+ +.
T Consensus 17 ~~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~l~~~~~ 68 (143)
T 3f04_A 17 VEKLGKLQYSLDYD-------------------------FQNNQLLVGIIQAAELPALDM---GGTSDPYVKVFLLPDKK 68 (143)
T ss_dssp CCCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCBGG---GBCCCEEEEEEEESCCS
T ss_pred ccCeEEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCCCC---CCCcCcEEEEEEECCCC
Confidence 34578998888653 234799999999999998754 478999999999 55
Q ss_pred EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeee
Q 003882 416 KWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLL 490 (789)
Q Consensus 416 ~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 490 (789)
+.++|+++++|+||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+.....||+|.
T Consensus 69 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~-----~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 69 KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS-----KHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS-----CCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred ccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCC-----CCceEEEEEEEHHHccCCCCcceEEECc
Confidence 689999999999999999999998742 479999999999976 8899999999999999988889999995
No 54
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=2.5e-17 Score=150.75 Aligned_cols=101 Identities=23% Similarity=0.364 Sum_probs=84.7
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE-----CCEEEeeccccCCCCCccccEEEEEEeC----CCceEEEEE
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY-----GLKWVRTRTLVDNFNPKWNEQYTWEVYD----PCTVITLGV 450 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~v~~----~~~~l~v~v 450 (789)
.|.|.|+|++|+||+.++ ..|.+||||++.+ +.+..+|+++++|+||+|||.|.|.+.. ....|.|+|
T Consensus 17 ~~~L~v~v~~a~~L~~~d---~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V 93 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSRE---DGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 93 (129)
T ss_dssp TTEEEEEEEEEESCCCCT---TSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCC---CCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEE
Confidence 379999999999999874 4578999999999 4678999999999999999999999642 256999999
Q ss_pred EeCCCCCCCCCCC--CCccEEEEEECcccccCceEeeeEee
Q 003882 451 FDNCHLGGSGTKP--DSRIGKVRIRLSTLEADRIYTHSYPL 489 (789)
Q Consensus 451 ~d~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L 489 (789)
||++..+ . +++||++.|+|.++.... ...||+|
T Consensus 94 ~d~d~~~-----~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 94 WDQARVR-----EEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEC------------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EECCcCc-----CcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 9999874 4 899999999999987655 7899998
No 55
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.72 E-value=3.6e-17 Score=150.45 Aligned_cols=103 Identities=16% Similarity=0.222 Sum_probs=91.2
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE-----CCEEEeeccccCCCCCccccEEEEE-EeC---CCceEEEEE
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY-----GLKWVRTRTLVDNFNPKWNEQYTWE-VYD---PCTVITLGV 450 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~-v~~---~~~~l~v~v 450 (789)
.|.|.|+|++|+||+. + ..|.+||||+|++ +....||+++++|+||+|||.|.|. +.. ....|.|+|
T Consensus 19 ~~~L~V~V~~a~~L~~-~---~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT-E---DGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp TTEEEEEEEEEECCCC-T---TSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred CCEEEEEEEEeeCCCC-C---CCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 3799999999999985 3 3578999999999 4567999999999999999999999 763 357999999
Q ss_pred EeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeee
Q 003882 451 FDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLV 491 (789)
Q Consensus 451 ~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 491 (789)
||++.++ ++++||++.|+|.++..++....||+|..
T Consensus 95 ~d~d~~~-----~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 95 LSAESLR-----ENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EECCSSS-----CCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EECCCCC-----CCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999886 78999999999999998888899999974
No 56
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=3e-17 Score=152.75 Aligned_cols=121 Identities=19% Similarity=0.326 Sum_probs=100.3
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE-----C
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY-----G 414 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~ 414 (789)
...|+|.+.+.+.. ..+.|.|+|++|+||+.++ ..+.+||||++++ +
T Consensus 5 ~~~G~i~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~ 56 (141)
T 1v27_A 5 SSGGQLSIKLWFDK-------------------------VGHQLIVTILGAKDLPSRE---DGRPRNPYVKIYFLPDRSD 56 (141)
T ss_dssp CCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCS---SSCCCCEEEECCCSSCCSS
T ss_pred CcccEEEEEEEEeC-------------------------CCCEEEEEEEEccCCCCcC---CCCCCCCEEEEEEecCCCC
Confidence 45799999987532 2379999999999999874 4578999999998 4
Q ss_pred CEEEeeccccCCCCCccccEEEEEEeC----CCceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeee
Q 003882 415 LKWVRTRTLVDNFNPKWNEQYTWEVYD----PCTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLL 490 (789)
Q Consensus 415 ~~~~~T~~~~~t~~P~wne~~~f~v~~----~~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 490 (789)
.+.+||+++++|+||+|||.|.|.+.. ....|.|+|||++.++ ...+++||++.|+|.++.... ...||+|.
T Consensus 57 ~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~---~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~ 132 (141)
T 1v27_A 57 KNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR---EEESEFLGEILIELETALLDD-EPHWYKLQ 132 (141)
T ss_dssp SSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSS---SCCBCCCEEEEEEGGGCCCSS-EEEEEECB
T ss_pred CcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCc---CCCCceEEEEEEEccccCCCC-CCceEECc
Confidence 578999999999999999999999542 2479999999999875 012899999999999987655 78999997
Q ss_pred ec
Q 003882 491 VL 492 (789)
Q Consensus 491 ~~ 492 (789)
..
T Consensus 133 ~~ 134 (141)
T 1v27_A 133 TH 134 (141)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 57
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=4e-17 Score=152.07 Aligned_cols=121 Identities=19% Similarity=0.242 Sum_probs=99.7
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC----
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL---- 415 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~---- 415 (789)
...|+|.+.+.+. +..+.|.|.|++|+||+.++. .| +||||+|++.+
T Consensus 8 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~---~g-~dpyv~v~l~~~~~~ 58 (142)
T 2dmg_A 8 SPLGQIQLTIRHS-------------------------SQRNKLIVVVHACRNLIAFSE---DG-SDPYVRMYLLPDKRR 58 (142)
T ss_dssp CSSCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSST---TC-CCEEEEEEEESCCCS
T ss_pred CCcceEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCCCC---CC-CCeeEEEEEEcCCCC
Confidence 4579999988753 223799999999999998854 46 99999999932
Q ss_pred -EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeee
Q 003882 416 -KWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLV 491 (789)
Q Consensus 416 -~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 491 (789)
..++|+++++|+||+|||.|.|.+... ...|.|+|||++.++ ...|++||++.|+|.++..+.....||+|..
T Consensus 59 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~---~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 59 SGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL---SKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp SSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS---CCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred CCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc---ccCCcEEEEEEEecccccccccccceeeccC
Confidence 579999999999999999999998642 458999999999864 1125799999999999988777899999974
Q ss_pred c
Q 003882 492 L 492 (789)
Q Consensus 492 ~ 492 (789)
.
T Consensus 136 ~ 136 (142)
T 2dmg_A 136 D 136 (142)
T ss_dssp S
T ss_pred C
Confidence 3
No 58
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.71 E-value=6e-17 Score=149.88 Aligned_cols=103 Identities=24% Similarity=0.391 Sum_probs=91.3
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE-----CCEEEeeccccCCCCCccccEEEEEEeCC--CceEEEEEEeC
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY-----GLKWVRTRTLVDNFNPKWNEQYTWEVYDP--CTVITLGVFDN 453 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~v~~~--~~~l~v~v~d~ 453 (789)
|.|.|+|++|+||+.++ ..|.+||||++.+ +...++|+++++++||.|||.|.|.+... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~d---~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMD---PNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCCS---TTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCC---CCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 69999999999999874 4578999999999 56789999999999999999999998753 35899999999
Q ss_pred CCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeec
Q 003882 454 CHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVL 492 (789)
Q Consensus 454 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 492 (789)
+.++ +|++||.+.|+|+++..+. ...||+|...
T Consensus 93 d~~~-----~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRTT-----RNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CSSS-----CCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCC-----CCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9876 7899999999999998766 7999999744
No 59
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.70 E-value=4.4e-17 Score=153.73 Aligned_cols=120 Identities=23% Similarity=0.345 Sum_probs=98.9
Q ss_pred ccccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE-----
Q 003882 339 LKFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY----- 413 (789)
Q Consensus 339 ~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~----- 413 (789)
....|++.+++++. +..|.|.|+|++|+||+.++ .|.+||||++.+
T Consensus 10 ~~~~G~~~lsL~y~-------------------------~~~~~L~V~v~~a~~L~~~d----~g~~Dpyv~v~l~~~~~ 60 (153)
T 3fbk_A 10 HKVQGAGQLRLSID-------------------------AQDRVLLLHIIEGKGLISKQ----PGTCDPYVKISLIPEDS 60 (153)
T ss_dssp ---CCCCEEEEEEE-------------------------ESSSEEEEEEEEEESCCCCS----SSCCCEEEEEEEESCSC
T ss_pred cCCCCEEEEEEEEE-------------------------CCCCEEEEEEEEeeCCCCCC----CCCCCEEEEEEEEcCCC
Confidence 34578888888753 23379999999999999874 378999999998
Q ss_pred CCEEEeeccccCCCCCccccEEEEEEe--CCCceEEEEEEeCCCCCCCCCCC-CCccEEEEEECccccc-CceEeeeEee
Q 003882 414 GLKWVRTRTLVDNFNPKWNEQYTWEVY--DPCTVITLGVFDNCHLGGSGTKP-DSRIGKVRIRLSTLEA-DRIYTHSYPL 489 (789)
Q Consensus 414 ~~~~~~T~~~~~t~~P~wne~~~f~v~--~~~~~l~v~v~d~~~~~~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L 489 (789)
..+..+|+++++|+||+|||.|.|.+. +....|.|+|||++.++ . |++||++.|+|.++.. +.....||+|
T Consensus 61 ~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~-----~~d~~lG~~~i~l~~l~~~~~~~~~W~~L 135 (153)
T 3fbk_A 61 RLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQS-----RQSGLIGCMSFGVKSLLTPDKEISGWYYL 135 (153)
T ss_dssp CTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSG-----GGCEEEEEEEEEHHHHTC--CCEEEEEEC
T ss_pred CccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCCC-----CCCcEEEEEEEEHHHhcCCCCccccEEEC
Confidence 335699999999999999999999994 44567999999999875 5 8999999999999985 7788999999
Q ss_pred eec
Q 003882 490 LVL 492 (789)
Q Consensus 490 ~~~ 492 (789)
...
T Consensus 136 ~~~ 138 (153)
T 3fbk_A 136 LGE 138 (153)
T ss_dssp BCT
T ss_pred CCh
Confidence 754
No 60
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=1.3e-16 Score=147.70 Aligned_cols=121 Identities=20% Similarity=0.219 Sum_probs=99.0
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEEC---CE
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYG---LK 416 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~---~~ 416 (789)
...|+|.+.+.... ..+.|.|+|++|+||+.++.. .+.+||||++.+. .+
T Consensus 6 ~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d~~--~~~~dpyv~v~~~~~~~~ 58 (138)
T 1ugk_A 6 SGLGTLFFSLEYNF-------------------------ERKAFVVNIKEARGLPAMDEQ--SMTSDPYIKMTILPEKKH 58 (138)
T ss_dssp CCCCEEEEEEEEEG-------------------------GGTEEEEEEEEEESCCCCBTT--TTBCEEEEEEEEETTTCS
T ss_pred CccEEEEEEEEEEC-------------------------CCCEEEEEEEEeeCCCCCCCC--CCCCCCEEEEEEecCCCc
Confidence 34799998887532 236999999999999987531 3789999999995 37
Q ss_pred EEeeccccCCCCCccccEEEEE-EeC---CCceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCc-eEeeeEeeee
Q 003882 417 WVRTRTLVDNFNPKWNEQYTWE-VYD---PCTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADR-IYTHSYPLLV 491 (789)
Q Consensus 417 ~~~T~~~~~t~~P~wne~~~f~-v~~---~~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~~~~L~~ 491 (789)
.+||+++++|+||+|||.|.|. +.. ....|.|+|||++.++ +|++||++.|+|.++..+. ....|++|..
T Consensus 59 ~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~-----~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 59 KVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFS-----RDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSC-----CCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred eEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCC-----CCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 8999999999999999999996 653 2469999999999876 8899999999999998754 4466788864
Q ss_pred c
Q 003882 492 L 492 (789)
Q Consensus 492 ~ 492 (789)
.
T Consensus 134 ~ 134 (138)
T 1ugk_A 134 G 134 (138)
T ss_dssp S
T ss_pred C
Confidence 3
No 61
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=1.3e-16 Score=147.57 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=98.1
Q ss_pred ccccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEEC---C
Q 003882 339 LKFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYG---L 415 (789)
Q Consensus 339 ~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~---~ 415 (789)
....|+|++.+.+.. ..+.|.|+|++|++ + +..|.+||||+|.+. +
T Consensus 9 ~~~~G~l~~sl~y~~-------------------------~~~~L~V~v~~a~~---~---d~~g~sDPyv~v~l~~~~~ 57 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDC-------------------------QKAELFVTRLEAVT---S---NHDGGCDCYVQGSVANRTG 57 (138)
T ss_dssp CSSCCEEEEEEEEET-------------------------TTTEEEEEEEEEEC---C---CCSSCCCEEEEEEEEETTE
T ss_pred CCcceEEEEEEEEeC-------------------------CCCEEEEEEEEEEc---C---CCCCCcceEEEEEEEcCCC
Confidence 345799999887532 23699999999994 3 456899999999993 2
Q ss_pred -EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeee
Q 003882 416 -KWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLV 491 (789)
Q Consensus 416 -~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 491 (789)
.+++|+++++|+||+|||.|.|.+... ...|.|+|||+|.++ +|++||++.|+|.++..+.....|++|..
T Consensus 58 ~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~-----~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 58 SVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFS-----RHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp EEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSC-----TTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred cccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCC-----CCcEEEEEEEEcccccCcccccceeeCcC
Confidence 368999999999999999999998753 568999999999986 89999999999999987677789999974
No 62
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=1e-16 Score=150.60 Aligned_cols=103 Identities=22% Similarity=0.367 Sum_probs=90.9
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEEC-----CEEEeeccccCCCCCccccEEEEEEeCC--CceEEEEEEeC
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYG-----LKWVRTRTLVDNFNPKWNEQYTWEVYDP--CTVITLGVFDN 453 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~-----~~~~~T~~~~~t~~P~wne~~~f~v~~~--~~~l~v~v~d~ 453 (789)
|.|.|+|++|+||+.++ ..+.+||||+|+++ ...+||+++++++||+|||.|.|.+... ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMD---PNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCCS---TTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCC---CCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 58999999999999874 45789999999996 4679999999999999999999999753 46899999999
Q ss_pred CCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeec
Q 003882 454 CHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVL 492 (789)
Q Consensus 454 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 492 (789)
+.++ +|++||.+.|+|.++..+ ....||+|...
T Consensus 108 d~~~-----~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 108 DLTS-----RNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp CSSS-----CCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred CCCC-----CCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 9976 789999999999999876 47899999743
No 63
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.70 E-value=5.5e-17 Score=155.97 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=92.2
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC-----EEEeeccccCCCCCccccEEEEEEeCCCceEEEEEE-eCC
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL-----KWVRTRTLVDNFNPKWNEQYTWEVYDPCTVITLGVF-DNC 454 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~-d~~ 454 (789)
|.|.|+|++|+||+.+|. ..|.+||||+|.+.+ ..+||+++++|+||+|||.|.|.+......|.|+|| |+|
T Consensus 30 ~~L~V~v~~a~~L~~~d~--~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPG--SKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp TEEEEEEEEEESCCCCC-----CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCc--CCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 699999999999998742 247899999999843 379999999999999999999998766789999999 999
Q ss_pred CCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeec
Q 003882 455 HLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVL 492 (789)
Q Consensus 455 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 492 (789)
.++ +|++||.+.|+|.++..++....||+|...
T Consensus 108 ~~~-----~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 108 RMD-----HKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTC-----SSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCC-----CCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 876 789999999999999988888999999754
No 64
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=2.1e-17 Score=153.96 Aligned_cols=104 Identities=24% Similarity=0.351 Sum_probs=90.7
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCE--------------EEeeccccCCCCCccccEEEEE-EeC---C
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLK--------------WVRTRTLVDNFNPKWNEQYTWE-VYD---P 442 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~--------------~~~T~~~~~t~~P~wne~~~f~-v~~---~ 442 (789)
|.|.|+|++|+||+.++ ..|.+||||++.+++. .+||+++++|+||+|||.|.|. +.. .
T Consensus 18 ~~L~V~v~~a~~L~~~d---~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~ 94 (142)
T 1rh8_A 18 GNLIIHILQARNLVPRD---NNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLM 94 (142)
T ss_dssp TEEEEEEEEEESCCCCS---SSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHT
T ss_pred CEEEEEEEEecCCCCCC---CCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHcc
Confidence 69999999999999874 4588999999999652 5899999999999999999997 542 3
Q ss_pred CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeec
Q 003882 443 CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVL 492 (789)
Q Consensus 443 ~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 492 (789)
...|.|+|||+|.++ +|++||.+.|+|.++..+.....||+|...
T Consensus 95 ~~~l~i~V~d~d~~~-----~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 95 KKTLEVTVWDYDRFS-----SNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp TCEEEEEEEEECSSS-----CEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred CCEEEEEEEECCCCC-----CCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 679999999999876 789999999999999877777899999743
No 65
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.69 E-value=9.2e-17 Score=149.57 Aligned_cols=119 Identities=24% Similarity=0.385 Sum_probs=100.0
Q ss_pred ccccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC---
Q 003882 339 LKFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL--- 415 (789)
Q Consensus 339 ~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~--- 415 (789)
....|+|.+.+.+.. ..+.|.|+|++|+||+.++ ..|.+||||++++++
T Consensus 12 ~~~~G~l~~~l~y~~-------------------------~~~~L~V~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~ 63 (142)
T 2chd_A 12 ATTLGALEFSLLYDQ-------------------------DNSNLQCTIIRAKGLKPMD---SNGLADPYVKLHLLPGAS 63 (142)
T ss_dssp --CCCEEEEEEEEEG-------------------------GGTEEEEEEEEEESCCCCC---TTSCCCEEEEEEEESCCS
T ss_pred CCccceEEEEEEEeC-------------------------CCCEEEEEEEEecCCCCCC---CCCCCCCEEEEEEEcCCC
Confidence 345789988887532 2379999999999999874 457899999999965
Q ss_pred --EEEeeccccCCCCCccccEEEEE-EeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEee
Q 003882 416 --KWVRTRTLVDNFNPKWNEQYTWE-VYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPL 489 (789)
Q Consensus 416 --~~~~T~~~~~t~~P~wne~~~f~-v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L 489 (789)
..+||+++++++||+|||.|.|. +... ...|.|+|||++.++ +|++||++.|+|.++..++....|++|
T Consensus 64 ~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~-----~d~~iG~~~i~l~~l~~~~~~~~~~~L 138 (142)
T 2chd_A 64 KSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFG-----HNEFIGETRFSLKKLKANQRKNFNICL 138 (142)
T ss_dssp GGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTS-----CEEEEEEEEEEGGGCCTTCCEEEEEEC
T ss_pred CcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCC-----CCcEEEEEEEEHHHcCCCCccEEEEec
Confidence 78999999999999999999998 5432 368999999999876 789999999999999988887888888
Q ss_pred e
Q 003882 490 L 490 (789)
Q Consensus 490 ~ 490 (789)
.
T Consensus 139 ~ 139 (142)
T 2chd_A 139 E 139 (142)
T ss_dssp B
T ss_pred c
Confidence 5
No 66
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.69 E-value=2.1e-16 Score=150.17 Aligned_cols=119 Identities=25% Similarity=0.286 Sum_probs=98.9
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEEC--C--
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYG--L-- 415 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~--~-- 415 (789)
...|+|.+.+.+. +..|.|.|+|++|+||+.++ ..|.+||||+|+++ +
T Consensus 9 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d---~~g~~dpyv~v~l~~~~~~ 60 (159)
T 1tjx_A 9 EKLGDICFSLRYV-------------------------PTAGKLTVVILEAKNLKKMD---VGGLSDPYVKIHLMQNGKR 60 (159)
T ss_dssp GCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCS---TTSCCCEEEEEEEEETTEE
T ss_pred CcCCeEEEEEEEc-------------------------CCCCEEEEEEEEeeCCCCcc---CCCCCCeEEEEEEEeCCce
Confidence 4589999998753 33479999999999999874 45789999999994 2
Q ss_pred -EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECccc------------cc
Q 003882 416 -KWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTL------------EA 479 (789)
Q Consensus 416 -~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l------------~~ 479 (789)
+.++|+++++|+||+|||.|.|.+... ...|.|+|||++.++ .|++||.+.|++..+ ..
T Consensus 61 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~-----~~~~iG~~~i~l~~~~~~~~~w~~l~~~~ 135 (159)
T 1tjx_A 61 LKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG-----KNDAIGKVFVGYNSTGAELRHWSDMLANP 135 (159)
T ss_dssp EEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS-----CCEEEEEEEEETTCCHHHHHHHHHHHHST
T ss_pred eceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC-----CCceEEEEEECCCCCCcHHHHHHHHHHCC
Confidence 468999999999999999999998753 458999999999976 899999999999953 23
Q ss_pred CceEeeeEeeee
Q 003882 480 DRIYTHSYPLLV 491 (789)
Q Consensus 480 ~~~~~~~~~L~~ 491 (789)
++....||+|..
T Consensus 136 ~~~~~~W~~L~~ 147 (159)
T 1tjx_A 136 RRPIAQWHTLQV 147 (159)
T ss_dssp TCCEEEEEECBC
T ss_pred CCeeeeEEECcC
Confidence 456788999864
No 67
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=9.7e-17 Score=150.36 Aligned_cols=123 Identities=18% Similarity=0.155 Sum_probs=101.3
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCC-ccC---CCCCCcCcEEEEEEC-
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPM-KTR---DGRGTTDAYCVAKYG- 414 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~-~~~---~~~~~~dpyv~v~~~- 414 (789)
...|+|.+.+.+. +..|.|.|+|++|+||+.. +.. +..+.+||||+|++.
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~ 64 (147)
T 2enp_A 10 YQLGMLHFSTQYD-------------------------LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP 64 (147)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET
T ss_pred CcceEEEEEEEEc-------------------------CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe
Confidence 4589999988753 2347999999999999983 321 123589999999995
Q ss_pred --CEEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEee
Q 003882 415 --LKWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPL 489 (789)
Q Consensus 415 --~~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L 489 (789)
.+.+||+++++++||+|||.|.|.+... ...|.|+|||++.++ ++++||++.|+|.++..+.....|++|
T Consensus 65 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~-----~~~~iG~~~i~l~~l~~~~~~~~w~~L 139 (147)
T 2enp_A 65 DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFS-----RHCVIGKVSVPLCEVDLVKGGHWWKAL 139 (147)
T ss_dssp CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTC-----CSCCCEEEEEETTTSCTTTCCCEEECC
T ss_pred CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCc-----CCcEEEEEEEechhcCCCCCccEEEEe
Confidence 4679999999999999999999998642 458999999999876 788999999999999877666889999
Q ss_pred eec
Q 003882 490 LVL 492 (789)
Q Consensus 490 ~~~ 492 (789)
...
T Consensus 140 ~~~ 142 (147)
T 2enp_A 140 IPS 142 (147)
T ss_dssp BCC
T ss_pred ecC
Confidence 743
No 68
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.68 E-value=2.1e-16 Score=146.36 Aligned_cols=101 Identities=25% Similarity=0.354 Sum_probs=84.6
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC-----EEEeeccccCCCCCccccEEEEEEeCCC---ceEEEEEE
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL-----KWVRTRTLVDNFNPKWNEQYTWEVYDPC---TVITLGVF 451 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~wne~~~f~v~~~~---~~l~v~v~ 451 (789)
.|.|.|+|++|+||+.++. .|.+||||++++++ ...+|++++++.||+|||.|.|.+.... ..|.|+||
T Consensus 15 ~~~L~v~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~ 91 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDI---GGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVM 91 (138)
T ss_dssp TTEEEEEEEEEESCCCCBT---TTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEE
T ss_pred CCeEEEEEEEeeCCCCcCC---CCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEE
Confidence 4799999999999998743 57899999999953 4799999999999999999999987543 68999999
Q ss_pred eCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeee
Q 003882 452 DNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLL 490 (789)
Q Consensus 452 d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 490 (789)
|++.++ +|++||++.|++.++..+ ..+|++|.
T Consensus 92 d~~~~~-----~~~~lG~~~i~l~~~~~~--~~~W~~l~ 123 (138)
T 3n5a_A 92 DKDKLS-----RNDVIGKIYLSWKSGPGE--VKHWKDMI 123 (138)
T ss_dssp ECCSSS-----CCEEEEEEEESSSSCHHH--HHHHHHHH
T ss_pred ECCCCC-----CCcEEEEEEEccccCChH--HHHHHHHH
Confidence 999876 889999999999986422 24555554
No 69
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=4.1e-16 Score=149.25 Aligned_cols=107 Identities=19% Similarity=0.292 Sum_probs=91.8
Q ss_pred ccccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC---
Q 003882 339 LKFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL--- 415 (789)
Q Consensus 339 ~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~--- 415 (789)
....|+|.+.+.+. +..|.|.|.|++|+||+.++ ..|.+||||+|++++
T Consensus 20 ~~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d---~~g~~DPyv~v~l~~~~~ 71 (166)
T 2cm5_A 20 IEERGKILVSLMYS-------------------------TQQGGLIVGIIRCVHLAAMD---ANGYSDPFVKLWLKPDMG 71 (166)
T ss_dssp CCCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCS---TTSCCCEEEEEEEETC--
T ss_pred cCccceEEEEEEEE-------------------------CCCCEEEEEEEEeECCCCcc---CCCCCCcEEEEEEECCCC
Confidence 45679999988753 23479999999999999874 357899999999965
Q ss_pred --EEEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccc
Q 003882 416 --KWVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLE 478 (789)
Q Consensus 416 --~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~ 478 (789)
..++|+++++|+||+|||.|.|.+... ...|.|+|||++.++ +|++||.+.|++.++.
T Consensus 72 ~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~-----~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 72 KKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGK-----SNDYIGGCQLGISAKG 134 (166)
T ss_dssp -CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS-----CCEEEEEEEEETTCCH
T ss_pred ccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCC-----CCcEEEeEEEecccCC
Confidence 679999999999999999999999752 459999999999876 7899999999999864
No 70
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.67 E-value=2.5e-16 Score=140.65 Aligned_cols=118 Identities=17% Similarity=0.220 Sum_probs=103.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeecccc-CCCCCeeccEEEEEccCC--CCceEEEEEEeCCCCCCC
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFE-KKSNPEWKQVFAFSKEKI--QSSVLEVFVRDREIVGRD 130 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~-~t~nP~wne~f~f~~~~~--~~~~l~v~V~d~~~~~~d 130 (789)
-.|+|+|.+|.+|+ |++|||+++.+.+.+++|++++ ++.||+|||.|.|++..+ .+..|.|.|+|++.++++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~n 95 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSN 95 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCC
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCC
Confidence 35999999999998 4789999999999999999998 699999999999998543 478999999999999999
Q ss_pred ceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEeec
Q 003882 131 DYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGTQ 182 (789)
Q Consensus 131 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~ 182 (789)
++||++.++|+++....... .+-+|.+.+.. ...++|.+++.|.+.
T Consensus 96 rlIG~~~i~Lq~lv~~~~l~-----l~~~LvD~n~~-~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 96 KLIGTFRMVLQKVVEENRVE-----VSDTLIDDNNA-IIKTSLSMEVRYQAA 141 (144)
T ss_dssp EEEEEEEEESHHHHHHSEEE-----EEEEEECTTSC-EEEEEEEEEEEEEET
T ss_pred CEEEEEEEEhHHhccCCeEE-----EeecccCCCCC-ccccEEEEEEEecCC
Confidence 99999999999999876443 56788887765 456899999999864
No 71
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.66 E-value=1.7e-16 Score=144.83 Aligned_cols=88 Identities=25% Similarity=0.343 Sum_probs=74.7
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeecccc-CCCCCeeccEEEEEccCCCCceEEEEEEeCCCCCCCc
Q 003882 53 MFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFE-KKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIVGRDD 131 (789)
Q Consensus 53 ~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~-~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~~~d~ 131 (789)
++.|.|+|++|++|+. .|.+||||+++ .+..+|+++. +|.||+|||+|.|.+... ...|.|+|||+| +++|+
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~dd 76 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWDT 76 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SSCEE
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CCCCC
Confidence 5899999999999853 67899999999 3344555554 799999999999999765 468999999999 88999
Q ss_pred eeEEEEEEccccCCCC
Q 003882 132 YIGKVVFDMNEVPTRV 147 (789)
Q Consensus 132 ~lG~~~i~l~~l~~~~ 147 (789)
+||++.|+|.++....
T Consensus 77 ~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 77 MVGTVWIPLRTIRQSN 92 (131)
T ss_dssp EEEEEEEEGGGSCBCS
T ss_pred eEEEEEEEHHHhhhcC
Confidence 9999999999987653
No 72
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.65 E-value=1.1e-15 Score=144.08 Aligned_cols=117 Identities=16% Similarity=0.159 Sum_probs=90.9
Q ss_pred cccceEEEEEEEcCcccccCCcccccCCCCcccccccCCCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE--CCE-
Q 003882 340 KFSSRIHLRVCLEGAYHVMDESTMYISDQRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY--GLK- 416 (789)
Q Consensus 340 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~- 416 (789)
...|+|.+.+.+. +..+.|.|+|++|+||+.++ ..|.+||||+|.+ ++.
T Consensus 14 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~~~~~~~~ 65 (153)
T 1w15_A 14 SGRGELLVSLCYQ-------------------------STTNTLTVVVLKARHLPKSD---VSGLSDPYVKVNLYHAKKR 65 (153)
T ss_dssp --CCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCC---------CCCEEEEEEEEETTEE
T ss_pred ccccEEEEEEEEc-------------------------CCCCEEEEEEEEeECCCCcC---CCCCCCeEEEEEEEeCCeE
Confidence 4578998888653 23479999999999999874 3578999999999 443
Q ss_pred --EEeeccccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeee
Q 003882 417 --WVRTRTLVDNFNPKWNEQYTWEVYDP---CTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLV 491 (789)
Q Consensus 417 --~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 491 (789)
.+||+++++|+||+|||.|.|.+... ...|.|+|||++.++ .|++||++.|++++. +.....|++|..
T Consensus 66 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~-----~~~~lG~~~i~l~~~--~~~~~~W~~l~~ 138 (153)
T 1w15_A 66 ISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGS-----RNEVIGRLVLGATAE--GSGGGHWKEICD 138 (153)
T ss_dssp EEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTS-----CCEEEEEEEESTTCC--SHHHHHHHHHHH
T ss_pred eceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCC-----CCcEEEEEEECCCCC--chHHHHHHHHHh
Confidence 68999999999999999999998764 368999999999876 789999999999983 344466666653
No 73
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.64 E-value=7.1e-16 Score=146.60 Aligned_cols=120 Identities=18% Similarity=0.215 Sum_probs=88.6
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeecccc-CCCCCeeccEEEEEccCCCCceEEEEEEeCCCCCCCc
Q 003882 53 MFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFE-KKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIVGRDD 131 (789)
Q Consensus 53 ~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~-~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~~~d~ 131 (789)
++.|.|+|++|++|+ ..|.+||||+|+ .+..+|+++. +|.||+|||+|.|.+.+. ...|.|+|||+| +++|+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSCCE
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCCCc
Confidence 588999999999885 267899999999 4445666665 699999999999999875 468999999999 88999
Q ss_pred eeEEEEEEccccCCCCCCCC--CCCCeeEEcccCCCCC-----ccceEEEEEEEEe
Q 003882 132 YIGKVVFDMNEVPTRVPPDS--PLAPQWYRLEDRRDDR-----KVKGEVMLAVWIG 180 (789)
Q Consensus 132 ~lG~~~i~l~~l~~~~~~~~--~~~~~w~~L~~~~~~~-----~~~G~l~l~~~~~ 180 (789)
+||++.|+|.++..... +. ...+.||.+....+.. ...+.+.+.+++.
T Consensus 86 ~iG~~~i~L~~l~~~~~-~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQSNE-EGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp EEEEEEEEGGGSCBCSS-CCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEHHHhcccCc-CCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 99999999999876531 11 1222445544333320 1235566777664
No 74
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.64 E-value=5.8e-16 Score=141.34 Aligned_cols=117 Identities=21% Similarity=0.328 Sum_probs=85.0
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeecccc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCCCC
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLV-DNFNPKWNEQYTWEVYDPCTVITLGVFDNCHLGG 458 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~~ 458 (789)
.|.|.|+|++|++|.. .|.+||||+|+ ++..+|++++ +++||.|||.|.|.+.++...|.|+|||+| ++
T Consensus 4 ~~~L~V~V~~A~~l~~------~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 73 (131)
T ss_dssp CEEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS-
T ss_pred ceEEEEEEEEeECCCC------CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC-
Confidence 4799999999998852 36899999999 3445676665 699999999999999987789999999999 65
Q ss_pred CCCCCCCccEEEEEECcccccCc------eEeeeEeeeecC--CCCC--ccceEEEEEEEEe
Q 003882 459 SGTKPDSRIGKVRIRLSTLEADR------IYTHSYPLLVLN--PSGV--KKMGELQLAVRFT 510 (789)
Q Consensus 459 ~~~~~d~~lG~~~i~l~~l~~~~------~~~~~~~L~~~~--~~g~--~~~G~i~l~~~f~ 510 (789)
.|++||++.|+|+++.... +...||++...+ ..|. ...+.+.+.++|+
T Consensus 74 ----~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~~ 131 (131)
T 2cjt_A 74 ----WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 131 (131)
T ss_dssp ----CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred ----CCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEeC
Confidence 8999999999999986432 334444443221 1121 1245577777663
No 75
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.63 E-value=2.5e-15 Score=134.21 Aligned_cols=117 Identities=19% Similarity=0.254 Sum_probs=103.8
Q ss_pred EEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeecccc-CCCCCccccEEEEEEeC---CCceEEEEEEeCCCCC
Q 003882 382 ILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLV-DNFNPKWNEQYTWEVYD---PCTVITLGVFDNCHLG 457 (789)
Q Consensus 382 ~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~f~v~~---~~~~l~v~v~d~~~~~ 457 (789)
.|+|.|.+|.||+ |++|||+++.+.+.+++|++++ .+.||+|||.|+|++.. ....|.|.|+|++.++
T Consensus 22 sL~V~l~~a~~Lp--------g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 22 ALIVHLKTVSELR--------GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp EEEEEEEEEESCC--------SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred EEEEEEEEecCCC--------CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 7899999999997 5899999999999999999998 59999999999999985 3779999999999997
Q ss_pred CCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCccceEEEEEEEEeecC
Q 003882 458 GSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVKKMGELQLAVRFTCLS 513 (789)
Q Consensus 458 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~~~ 513 (789)
++.+||++.|+|.++..++....+-+|.+.+. ....++|.++++|+|..
T Consensus 94 -----~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~--~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 94 -----SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNN--AIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp -----CCEEEEEEEEESHHHHHHSEEEEEEEEECTTS--CEEEEEEEEEEEEEETT
T ss_pred -----CCCEEEEEEEEhHHhccCCeEEEeecccCCCC--CccccEEEEEEEecCCC
Confidence 89999999999999998887788888886643 33358999999999864
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=3.5e-15 Score=141.77 Aligned_cols=120 Identities=20% Similarity=0.305 Sum_probs=92.3
Q ss_pred CccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeecccc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCCC
Q 003882 379 PIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLV-DNFNPKWNEQYTWEVYDPCTVITLGVFDNCHLG 457 (789)
Q Consensus 379 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~ 457 (789)
..|.|.|+|++|++|.. .+.+||||+|+ .+..+|++++ ++.||+|||.|.|.+.++...|.|+|||+| ++
T Consensus 12 ~~~~L~V~V~~A~~l~~------~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 82 (167)
T ss_dssp CCCEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEEEECCCC------CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC
Confidence 35799999999998842 36899999999 3446777776 699999999999999988889999999999 65
Q ss_pred CCCCCCCCccEEEEEECcccccCc------eEeeeEeeeecCCC--CC--ccceEEEEEEEEeec
Q 003882 458 GSGTKPDSRIGKVRIRLSTLEADR------IYTHSYPLLVLNPS--GV--KKMGELQLAVRFTCL 512 (789)
Q Consensus 458 ~~~~~~d~~lG~~~i~l~~l~~~~------~~~~~~~L~~~~~~--g~--~~~G~i~l~~~f~~~ 512 (789)
+|++||++.|+|.++.... +...||.+...+.. |. ...|.+.++++|...
T Consensus 83 -----~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~ 142 (167)
T 2cjs_A 83 -----WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELP 142 (167)
T ss_dssp -----CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECC
T ss_pred -----CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecC
Confidence 8999999999999986432 44566665433211 11 225678888888643
No 77
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.60 E-value=3.8e-15 Score=169.58 Aligned_cols=123 Identities=23% Similarity=0.365 Sum_probs=106.0
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeCCCCCCCc
Q 003882 52 QMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIVGRDD 131 (789)
Q Consensus 52 ~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~~~d~ 131 (789)
..+.|.|+|++|++|+..|..|.+||||+|++++++++|+++++|.||+|||+|.|.+.......|.|+|||+|.+++|+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d 464 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDD 464 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCC
Confidence 45799999999999999999999999999999999999999999999999999999998777788999999999999999
Q ss_pred eeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 132 YIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 132 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
+||++.++|.++..+..... ....|++|... ..|+|.+++.+.
T Consensus 465 ~lG~~~~~l~~l~~~~~~~~-~~~~~~~l~~~-----~~G~i~l~~~l~ 507 (510)
T 3jzy_A 465 FLGRTEIPVAKIRTEQESKG-PMTRRLLLHEV-----PTGEVWVRFDLQ 507 (510)
T ss_dssp EEEEEEEEHHHHHHHHHHHC-SCCEEEECBSS-----SSCEEEEEEEEE
T ss_pred ceEEEEEEHHHhccccCCCC-ceeeeecCCCC-----CCceEEEEEEEE
Confidence 99999999999986532111 12389999864 368888887653
No 78
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.57 E-value=9.7e-15 Score=163.42 Aligned_cols=112 Identities=21% Similarity=0.212 Sum_probs=96.0
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeeeeeccccCCCCCeeccEEEEEccC-CCCceEEEEEEeCCCCCCC
Q 003882 52 QMFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYKGKTRHFEKKSNPEWKQVFAFSKEK-IQSSVLEVFVRDREIVGRD 130 (789)
Q Consensus 52 ~~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~~~~-~~~~~l~v~V~d~~~~~~d 130 (789)
.++.|.|+|++|++|+. |..|.+||||+|+++++++||+++++|+||+|||+|.|.+.. .....|+|+|||+|.+++|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 47899999999999998 889999999999999999999999999999999999998643 3468999999999999999
Q ss_pred ceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEee
Q 003882 131 DYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGT 181 (789)
Q Consensus 131 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 181 (789)
|+||++.++|.. + ..+ .|++|. .|+|.+++.+..
T Consensus 471 D~LG~~~~~L~~---g-~~~-----~~~~l~--------~G~l~~~~~~~c 504 (540)
T 3nsj_A 471 DLLGSCDRSPHS---G-FHE-----VTCELN--------HGRVKFSYHAKC 504 (540)
T ss_dssp EEEEEEEECCCS---E-EEE-----EEEECS--------SSEEEEEEEEEE
T ss_pred CEEEEEEEEeeC---C-cEE-----EEEEcC--------CeEEEEEEEEEE
Confidence 999999999872 2 122 688753 378888877543
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.56 E-value=1e-14 Score=165.97 Aligned_cols=119 Identities=28% Similarity=0.471 Sum_probs=103.1
Q ss_pred CCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeeccccCCCCCccccEEEEEEeCC-CceEEEEEEeCCCC
Q 003882 378 QPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLVDNFNPKWNEQYTWEVYDP-CTVITLGVFDNCHL 456 (789)
Q Consensus 378 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~-~~~l~v~v~d~~~~ 456 (789)
...|.|.|+|++|+||+++| ..|.+||||++.++++.++|+++++|+||.|||.|.|.+..+ ...|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d---~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACK---PNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCS---TTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCC---CCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 35689999999999999874 458999999999999999999999999999999999999875 46899999999998
Q ss_pred CCCCCCCCCccEEEEEECcccccCce----EeeeEeeeecCCCCCccceEEEEEEEEe
Q 003882 457 GGSGTKPDSRIGKVRIRLSTLEADRI----YTHSYPLLVLNPSGVKKMGELQLAVRFT 510 (789)
Q Consensus 457 ~~~~~~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 510 (789)
+ +|++||++.++|.++..+.. ...|++|... ..|+|++++.+.
T Consensus 461 ~-----~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 S-----PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDLQ 507 (510)
T ss_dssp S-----SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEEE
T ss_pred C-----CCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEEE
Confidence 6 89999999999999987543 6789998632 459999988765
No 80
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.56 E-value=2.4e-14 Score=164.09 Aligned_cols=121 Identities=20% Similarity=0.325 Sum_probs=105.4
Q ss_pred ceeEEEEEEEEeeCCCCCCC--CCCCCcEEEEEECC-----eeeeeccccCC-CCCeeccEEEEEccCCCCceEEEEEEe
Q 003882 52 QMFYLYVRVEKARDLPTNPV--SGSCDPYVEVKLGN-----YKGKTRHFEKK-SNPEWKQVFAFSKEKIQSSVLEVFVRD 123 (789)
Q Consensus 52 ~~~~L~V~v~~a~~L~~~~~--~g~~dpyv~v~~~~-----~~~~T~~~~~t-~nP~wne~f~f~~~~~~~~~l~v~V~d 123 (789)
..+.|.|+|++|++|+..+. .+.+||||+|.+.+ .++||++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 34889999999999998873 68899999999955 57899999998 999999999999977656799999999
Q ss_pred CCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 124 REIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 124 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
+|.++++++||++.++|..|..+. .|++|.+..|..-..+.|.+.+.+.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~--------r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY--------RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE--------EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc--------EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 999999999999999999997652 7999999887644568888888764
No 81
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.55 E-value=2.9e-14 Score=159.59 Aligned_cols=112 Identities=21% Similarity=0.261 Sum_probs=95.9
Q ss_pred CCccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCEEEeeccccCCCCCccccEEEEEEeC--CCceEEEEEEeCCC
Q 003882 378 QPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLKWVRTRTLVDNFNPKWNEQYTWEVYD--PCTVITLGVFDNCH 455 (789)
Q Consensus 378 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~--~~~~l~v~v~d~~~ 455 (789)
...|.|+|+|++|+||+. |. .|.+||||+|+++++.+||+++++++||+|||.|.|.+.+ ....|.|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~---~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DY---TTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SS---CSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc-cc---CCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 346899999999999987 43 5789999999999999999999999999999999998753 57899999999999
Q ss_pred CCCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCccceEEEEEEEEee
Q 003882 456 LGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVKKMGELQLAVRFTC 511 (789)
Q Consensus 456 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~ 511 (789)
.+ .||+||++.++|.. +....|.+|. .|.|++.+....
T Consensus 467 ~~-----~dD~LG~~~~~L~~----g~~~~~~~l~---------~G~l~~~~~~~c 504 (540)
T 3nsj_A 467 GW-----DDDLLGSCDRSPHS----GFHEVTCELN---------HGRVKFSYHAKC 504 (540)
T ss_dssp SS-----CCEEEEEEEECCCS----EEEEEEEECS---------SSEEEEEEEEEE
T ss_pred CC-----CCCEEEEEEEEeeC----CcEEEEEEcC---------CeEEEEEEEEEE
Confidence 75 78999999999983 3457888863 489988877654
No 82
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.50 E-value=2.4e-14 Score=164.92 Aligned_cols=106 Identities=25% Similarity=0.417 Sum_probs=95.9
Q ss_pred ceeEEEEEEEEeeCCCC---CCCCCCCCcEEEEEECC---eeeeeccccCCCCCeeccEEEEEccCCCCceEEEEEEeCC
Q 003882 52 QMFYLYVRVEKARDLPT---NPVSGSCDPYVEVKLGN---YKGKTRHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDRE 125 (789)
Q Consensus 52 ~~~~L~V~v~~a~~L~~---~~~~g~~dpyv~v~~~~---~~~~T~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~ 125 (789)
+.+.|.|+|++|++|+. +|..|.+||||+|++++ .++||+++++|+||+|||+|.|.+.......|+|+|||+|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 45899999999999998 77788999999999995 5789999999999999999999998766789999999999
Q ss_pred CCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccC
Q 003882 126 IVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDR 163 (789)
Q Consensus 126 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 163 (789)
.++ |++||++.|+|.++..+...+ .|++|.+.
T Consensus 96 ~~~-ddfIG~v~I~L~~L~~g~~~~-----~w~~L~~~ 127 (749)
T 1cjy_A 96 YVM-DETLGTATFTVSSMKVGEKKE-----VPFIFNQV 127 (749)
T ss_dssp SSS-CEEEEEECCBSTTSCTTCCCC-----EEEEETTT
T ss_pred CCC-CceeEEEEEEHHHcCCCCceE-----EEEecCCC
Confidence 998 999999999999998776555 99999764
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.48 E-value=1.9e-13 Score=156.58 Aligned_cols=121 Identities=22% Similarity=0.314 Sum_probs=100.7
Q ss_pred CccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC-----EEEeeccccCC-CCCccccEEEEEEeCC-CceEEEEEE
Q 003882 379 PIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL-----KWVRTRTLVDN-FNPKWNEQYTWEVYDP-CTVITLGVF 451 (789)
Q Consensus 379 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-----~~~~T~~~~~t-~~P~wne~~~f~v~~~-~~~l~v~v~ 451 (789)
..+.|+|+|++|++|+.++. ...+.+||||+|.+.+ .+.||++++++ +||+|||.|.|.+..+ ...|.|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~-~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNK-NKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSS-CSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccc-cccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 45899999999999998752 1257899999999943 68999999997 9999999999999876 368999999
Q ss_pred eCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCc-cceEEEEEEEEe
Q 003882 452 DNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVK-KMGELQLAVRFT 510 (789)
Q Consensus 452 d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~f~ 510 (789)
|+|.++ +|++||++.|+|..|..|. +|++|.+.. |.. ..|+|.+.+.|.
T Consensus 574 D~D~~~-----~dd~iG~~~ipl~~L~~G~---r~v~L~d~~--g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDSSS-----KNDFIGQSTIPWNSLKQGY---RHVHLLSKN--GDQHPSATLFVKISIQ 623 (624)
T ss_dssp ECCSSS-----CCEEEEEEEEEGGGBCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EcCCCC-----CCceeEEEEEEHHHcCCCc---EEEeCCCCC--cCCCCceEEEEEEEEE
Confidence 999886 8999999999999998753 699998653 332 358888887763
No 84
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.45 E-value=5.9e-15 Score=165.09 Aligned_cols=121 Identities=19% Similarity=0.329 Sum_probs=21.5
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCE-EEeeccccCC---CCCccccEEEEEEeCCCceEEEEEEeC-C
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLK-WVRTRTLVDN---FNPKWNEQYTWEVYDPCTVITLGVFDN-C 454 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~-~~~T~~~~~t---~~P~wne~~~f~v~~~~~~l~v~v~d~-~ 454 (789)
.|.|+|+|++|+||++++ ||||++.++++ +.||+++++| +||+|||.|.|.+......|.|+|||+ |
T Consensus 10 ~~~L~V~VieAk~L~~~d--------dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d 81 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK--------RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSD 81 (483)
T ss_dssp EECC-----------------------------------------------------CCEECC-----------------
T ss_pred ccEEEEEEEEcCCcCCCC--------CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCC
Confidence 378999999999998752 99999999876 6899999999 999999999999766578999999994 4
Q ss_pred C---CCCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCC---------------------CCCccceEEEEEEEEe
Q 003882 455 H---LGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNP---------------------SGVKKMGELQLAVRFT 510 (789)
Q Consensus 455 ~---~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~---------------------~g~~~~G~i~l~~~f~ 510 (789)
. .+ +|++||++.|++.++..++..+.||+|..... +|.+..|.|+|+++|.
T Consensus 82 ~~~~~~-----~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~ 156 (483)
T 3bxj_A 82 KKRKKD-----KAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQ 156 (483)
T ss_dssp ------------------------------CCEECC--------------------------------------CEEEEE
T ss_pred ccccCC-----CCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEee
Confidence 2 33 78999999999999998888899999965432 1223469999999998
Q ss_pred ecC
Q 003882 511 CLS 513 (789)
Q Consensus 511 ~~~ 513 (789)
+..
T Consensus 157 ~~~ 159 (483)
T 3bxj_A 157 TMS 159 (483)
T ss_dssp ECC
T ss_pred eee
Confidence 653
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.41 E-value=3.2e-13 Score=155.67 Aligned_cols=104 Identities=19% Similarity=0.263 Sum_probs=93.3
Q ss_pred CCccEEEEEEEEccCCCC---CccCCCCCCcCcEEEEEEC---CEEEeeccccCCCCCccccEEEEEEeC-CCceEEEEE
Q 003882 378 QPIGILEVGILSAQGLLP---MKTRDGRGTTDAYCVAKYG---LKWVRTRTLVDNFNPKWNEQYTWEVYD-PCTVITLGV 450 (789)
Q Consensus 378 ~~~g~l~v~v~~a~~L~~---~~~~~~~~~~dpyv~v~~~---~~~~~T~~~~~t~~P~wne~~~f~v~~-~~~~l~v~v 450 (789)
++.|.|+|+|++|+||+. +|. .|.+||||+|+++ .+++||+++++++||+|||.|.|.+.. ....|.|+|
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~---~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V 91 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDM---LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITL 91 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHH---HCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCC---CCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEE
Confidence 456899999999999998 643 4789999999997 468999999999999999999999987 467999999
Q ss_pred EeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeee
Q 003882 451 FDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLL 490 (789)
Q Consensus 451 ~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 490 (789)
||+|.+ .|++||++.|+|.++..+.....|++|.
T Consensus 92 ~D~D~~------~ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 92 MDANYV------MDETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp EECCSS------SCEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred EECCCC------CCceeEEEEEEHHHcCCCCceEEEEecC
Confidence 999986 3889999999999999888889999995
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.37 E-value=4.2e-14 Score=158.16 Aligned_cols=100 Identities=20% Similarity=0.350 Sum_probs=12.7
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCe-eeeeccccCC---CCCeeccEEEEEccCCCCceEEEEEEeC-C---
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNY-KGKTRHFEKK---SNPEWKQVFAFSKEKIQSSVLEVFVRDR-E--- 125 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~-~~~T~~~~~t---~nP~wne~f~f~~~~~~~~~l~v~V~d~-~--- 125 (789)
+.|.|+|++|++|+++| ||||+++++++ ..||+++++| .||+|||+|.|.+... ...|.|+|||. +
T Consensus 11 ~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d~~~ 84 (483)
T 3bxj_A 11 NVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSDKKR 84 (483)
T ss_dssp ECC--------------------------------------------------CCEECC---------------------
T ss_pred cEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCCccc
Confidence 67999999999999876 99999999986 5799999999 9999999999997543 48999999994 4
Q ss_pred CCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCC
Q 003882 126 IVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 126 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 164 (789)
..++|++||++.|++.++..+...+ .||+|.+..
T Consensus 85 ~~~~d~~lG~v~i~l~~l~~~~~~~-----~W~~L~~~~ 118 (483)
T 3bxj_A 85 KKDKAGYVGLVTVPVATLAGRHFTE-----QWYPVTLPT 118 (483)
T ss_dssp ----------------------CCE-----ECC------
T ss_pred cCCCCceEEEEEEEHHHhcCCCCCC-----eEEECCCCC
Confidence 3678999999999999998765555 999996554
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.25 E-value=1e-11 Score=145.53 Aligned_cols=105 Identities=30% Similarity=0.563 Sum_probs=93.0
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC-----CeeeeeccccCCCCCeeccEEEEEccCC-CCceEEEEEEeCCCC
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKLG-----NYKGKTRHFEKKSNPEWKQVFAFSKEKI-QSSVLEVFVRDREIV 127 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~wne~f~f~~~~~-~~~~l~v~V~d~~~~ 127 (789)
+.|.|+|++|++|..+|..|.+||||++++. ..+++|+++++|+||+|||+|.|.+... ....|.|+|||+|.+
T Consensus 172 ~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp SEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSS
T ss_pred ceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccc
Confidence 7899999999999999999999999999993 3578999999999999999999998543 346799999999999
Q ss_pred CCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCC
Q 003882 128 GRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRR 164 (789)
Q Consensus 128 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 164 (789)
++|++||++.+++.++..... + .|++|....
T Consensus 252 ~~dd~iG~~~i~l~~l~~~~~-~-----~w~~Lls~~ 282 (674)
T 3pfq_A 252 SRNDFMGSLSFGISELQKAGV-D-----GWFKLLSQE 282 (674)
T ss_dssp SCCEECCBCCCBTTHHHHCCE-E-----EEEECBCTT
T ss_pred cccccccccccchhhhccCCc-c-----cceeecccc
Confidence 999999999999999987642 3 899998754
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.23 E-value=5.7e-11 Score=138.46 Aligned_cols=112 Identities=18% Similarity=0.261 Sum_probs=95.8
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-------eeeeeccccC-CCCCeeccE-EEEE-ccCCCCceEEEEEEe
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN-------YKGKTRHFEK-KSNPEWKQV-FAFS-KEKIQSSVLEVFVRD 123 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~-------~~~~T~~~~~-t~nP~wne~-f~f~-~~~~~~~~l~v~V~d 123 (789)
+.|.|+|++|++|+.. .+||||+|.+.+ .++||+++.+ +.||+|||+ |.|. +..+.-..|+|+|||
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 6899999999999853 689999999975 4679999986 599999998 9998 765555799999999
Q ss_pred CCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEee
Q 003882 124 REIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGT 181 (789)
Q Consensus 124 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 181 (789)
++ +++||++.++|..|..+. ++++|.+..|..-..+.|.+.+.+..
T Consensus 726 ~d----ddfiG~~~ipL~~L~~Gy--------R~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPGY--------RHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCEE--------EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred cC----CCeeeEEEEEHHHcCCcc--------eEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 84 799999999999998763 78999998887556689999988864
No 89
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.23 E-value=3.7e-11 Score=140.73 Aligned_cols=112 Identities=17% Similarity=0.247 Sum_probs=95.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eeeeeccccC-CCCCeecc-EEEEE-ccCCCCceEEEEEEeC
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN------YKGKTRHFEK-KSNPEWKQ-VFAFS-KEKIQSSVLEVFVRDR 124 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~------~~~~T~~~~~-t~nP~wne-~f~f~-~~~~~~~~l~v~V~d~ 124 (789)
..|.|+|++|++|+.. .+||||+|.+.+ .++||+++.+ +.||+||| +|.|. +..+....|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 5799999999999853 689999999975 2579999986 59999999 69998 6555557899999998
Q ss_pred CCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEee
Q 003882 125 EIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGT 181 (789)
Q Consensus 125 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 181 (789)
+ ++|||++.++|..|..+. ++++|.+..|..-..|.|.+.+.+..
T Consensus 801 d----ddfiG~~~lpL~~L~~Gy--------R~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRSGY--------HYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T----TEEEEEEEEETTTCCCEE--------EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C----ccEEeeEEEEHHHcCCCc--------eEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 799999999999998763 78999999887557899999998874
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.19 E-value=8.3e-11 Score=138.06 Aligned_cols=112 Identities=20% Similarity=0.264 Sum_probs=92.0
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eeeeec-cccC-CCCCeecc-EEEE-EccCCCCceEEEEEE
Q 003882 53 MFYLYVRVEKARDLPTNPVSGSCDPYVEVKLGN------YKGKTR-HFEK-KSNPEWKQ-VFAF-SKEKIQSSVLEVFVR 122 (789)
Q Consensus 53 ~~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~------~~~~T~-~~~~-t~nP~wne-~f~f-~~~~~~~~~l~v~V~ 122 (789)
.+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ +.||+||| +|.| .+..+.-..|+|.||
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 4789999999999985 4689999999953 357999 7765 68999999 7999 776555568999999
Q ss_pred eCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 123 DREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 123 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
|++ +++||++.|+|..|..+. .|++|.+..|..-..+.|.+.+.+.
T Consensus 753 D~d----~d~iG~~~ipl~~L~~G~--------r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNSGY--------HHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCCEE--------EEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EeC----CCccceEeeehhhcCCCc--------EEEeccCCCCCCCCceEEEEEEEEE
Confidence 986 799999999999998652 7899998877644567787777653
No 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.13 E-value=1.4e-10 Score=135.81 Aligned_cols=103 Identities=22% Similarity=0.403 Sum_probs=90.7
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE-----CCEEEeeccccCCCCCccccEEEEEEeC--CCceEEEEEEeC
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY-----GLKWVRTRTLVDNFNPKWNEQYTWEVYD--PCTVITLGVFDN 453 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~v~~--~~~~l~v~v~d~ 453 (789)
+.|.|.|++|++|.++| ..|.+||||++.+ +..+.+|+++++|+||.|||.|.|.+.. ....|.|+|||+
T Consensus 172 ~~L~V~v~~a~~L~~~d---~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMD---PNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp SEEEEEEEEEESCCCCS---TTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred ceeeeeeecccccCCCC---cccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeec
Confidence 68999999999999985 4589999999998 4467999999999999999999999875 356799999999
Q ss_pred CCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeec
Q 003882 454 CHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVL 492 (789)
Q Consensus 454 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 492 (789)
|..+ .|++||.+.++++++...+ ...|++|...
T Consensus 249 d~~~-----~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 249 DLTS-----RNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp CSSS-----CCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred cccc-----ccccccccccchhhhccCC-cccceeeccc
Confidence 9986 8999999999999998765 4899999754
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.07 E-value=6e-10 Score=129.88 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=89.0
Q ss_pred ccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC-------EEEeeccccC-CCCCccccE-EEEE-EeCC-CceEEE
Q 003882 380 IGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL-------KWVRTRTLVD-NFNPKWNEQ-YTWE-VYDP-CTVITL 448 (789)
Q Consensus 380 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-------~~~~T~~~~~-t~~P~wne~-~~f~-v~~~-~~~l~v 448 (789)
.+.|+|+|++|++|+. ..+||||+|.+.+ +++||+++++ ++||+|||. |.|. |..| -..|.|
T Consensus 649 ~~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf 721 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD-------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRI 721 (816)
T ss_dssp CEEEEEEEEEEECCCS-------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEE
T ss_pred ceEEEEEEEEcccCCC-------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEE
Confidence 3789999999999974 2689999999854 6789999986 699999998 9998 7655 468999
Q ss_pred EEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCcc-ceEEEEEEEEe
Q 003882 449 GVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVKK-MGELQLAVRFT 510 (789)
Q Consensus 449 ~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~-~G~i~l~~~f~ 510 (789)
.|||++ +++||++.|||+.|..| -+++||.+.. |... .++|.+.+...
T Consensus 722 ~V~D~d---------ddfiG~~~ipL~~L~~G---yR~vpL~~~~--g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 722 IVSEEN---------GKFIGHRVMPLDGIKPG---YRHVPLRNES--NRPLGLASVFAHIVAK 770 (816)
T ss_dssp EEEETT---------SCEEEEEEEESTTCCCE---EEEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EEEecC---------CCeeeEEEEEHHHcCCc---ceEEEEeCCC--CCCCCceEEEEEEEEE
Confidence 999963 57999999999999876 3579998653 3322 37888887765
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.06 E-value=4e-10 Score=132.00 Aligned_cols=109 Identities=21% Similarity=0.275 Sum_probs=88.3
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC------EEEeeccccC-CCCCcccc-EEEEE-EeCC-CceEEEEE
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL------KWVRTRTLVD-NFNPKWNE-QYTWE-VYDP-CTVITLGV 450 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~------~~~~T~~~~~-t~~P~wne-~~~f~-v~~~-~~~l~v~v 450 (789)
..|.|+|++|++|+. ..+||||+|.+.+ .++||+++++ ++||+||| .|.|. |..+ ...|.|+|
T Consensus 725 ~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSD-------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCS-------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred eEEEEEEEEeccCcc-------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEE
Confidence 489999999999974 2689999999854 3589999986 59999999 59998 6554 46899999
Q ss_pred EeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCc-cceEEEEEEEEe
Q 003882 451 FDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVK-KMGELQLAVRFT 510 (789)
Q Consensus 451 ~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~f~ 510 (789)
||+| +++||++.|||+.|..| -+++||.+.. |.. ..|+|.|.+.+.
T Consensus 798 ~D~d---------ddfiG~~~lpL~~L~~G---yR~vpL~~~~--g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 798 FEEG---------GKFVGHRILPVSAIRSG---YHYVCLRNEA--NQPLCLPALLIYTEAS 844 (885)
T ss_dssp EETT---------TEEEEEEEEETTTCCCE---EEEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EcCC---------ccEEeeEEEEHHHcCCC---ceEEEecCCC--CCccCceEEEEEEEEE
Confidence 9964 57999999999999876 3468998653 332 358999988876
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.99 E-value=1.5e-09 Score=127.50 Aligned_cols=111 Identities=18% Similarity=0.283 Sum_probs=87.1
Q ss_pred CccEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECC------EEEeec-cccC-CCCCcccc-EEEE-EEeCC-CceEE
Q 003882 379 PIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGL------KWVRTR-TLVD-NFNPKWNE-QYTW-EVYDP-CTVIT 447 (789)
Q Consensus 379 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~------~~~~T~-~~~~-t~~P~wne-~~~f-~v~~~-~~~l~ 447 (789)
..|.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ ++||+||| .|.| .|..+ -..|.
T Consensus 676 ~~~~L~V~Visa~~L~~-------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr 748 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR 748 (799)
T ss_dssp TCEEEEEEEEEEESCCS-------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred eeeeEEEEEEeccccCc-------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEE
Confidence 45799999999999984 3689999999832 368999 8875 69999999 6999 78655 35899
Q ss_pred EEEEeCCCCCCCCCCCCCccEEEEEECcccccCceEeeeEeeeecCCCCCccceEEEEEEEE
Q 003882 448 LGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADRIYTHSYPLLVLNPSGVKKMGELQLAVRF 509 (789)
Q Consensus 448 v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f 509 (789)
|.|||+| +++||++.|||+.|..| -+|++|.+..+.. -..+.|.+.+.+
T Consensus 749 ~~V~D~d---------~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~-~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 749 VAVMEEG---------NKFLGHRIIPINALNSG---YHHLCLHSESNMP-LTMPALFIFLEM 797 (799)
T ss_dssp EEEEETT---------TEEEEEEEEEGGGBCCE---EEEEEEECTTCCE-EEEEEEEEEEEE
T ss_pred EEEEEeC---------CCccceEeeehhhcCCC---cEEEeccCCCCCC-CCceEEEEEEEE
Confidence 9999964 57999999999999865 3589997653211 124777777765
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.95 E-value=1e-08 Score=88.71 Aligned_cols=107 Identities=15% Similarity=0.285 Sum_probs=84.2
Q ss_pred cEEEEEEEEccC--CCCCccCCCCCCcCcEEEEEECCEE----Eee-ccccCCCCCccccEEEEEEeCCCceEEEEEEeC
Q 003882 381 GILEVGILSAQG--LLPMKTRDGRGTTDAYCVAKYGLKW----VRT-RTLVDNFNPKWNEQYTWEVYDPCTVITLGVFDN 453 (789)
Q Consensus 381 g~l~v~v~~a~~--L~~~~~~~~~~~~dpyv~v~~~~~~----~~T-~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~ 453 (789)
+.|+|.+.++.- |++ .....||||.|.+.... .+| .++++|..|.|||.|.-.|.+ ...|.|.||+.
T Consensus 6 ~flRi~~~~~~~~~~~~-----~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~ 79 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQA-----EDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRA 79 (126)
T ss_dssp CEEEEEEEEEECSSCCC-----SSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEE
T ss_pred ccEEeeeccccccccCC-----ccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcC
Confidence 478888766553 332 12368999999986543 265 777789999999999999885 88999999973
Q ss_pred CCCCCCCCCCCCccEEEEEECcccc-----cCceEeeeEeeeecCCCCCccceEEEEEEEEe
Q 003882 454 CHLGGSGTKPDSRIGKVRIRLSTLE-----ADRIYTHSYPLLVLNPSGVKKMGELQLAVRFT 510 (789)
Q Consensus 454 ~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 510 (789)
. .++++.|.|++.+|. .+...+.|+.|. +.|+|++.++|-
T Consensus 80 a---------~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 80 A---------EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--------PQAKVLMSVQYF 124 (126)
T ss_dssp T---------TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--------SSCEEEEEEEEE
T ss_pred C---------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEe
Confidence 2 379999999999998 456789999996 579999998863
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.92 E-value=8.4e-09 Score=90.37 Aligned_cols=110 Identities=13% Similarity=0.141 Sum_probs=85.2
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEECCE-E---Eee-ccccCCCCCccccEEEEEEeCCCceEEEEEEeCCC
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGLK-W---VRT-RTLVDNFNPKWNEQYTWEVYDPCTVITLGVFDNCH 455 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~-~---~~T-~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~ 455 (789)
+.|+|.+.++.-.+-+. -.....||||.|.+... . .+| .++++|..|.|||.|.-.|.+ ...|.|.||+..
T Consensus 10 ~flRi~l~~~~~~~~~~--~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a- 85 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQS--CQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGKN- 85 (138)
T ss_dssp CCEEEEEEEEECCCCCC--SCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECSS-
T ss_pred cceEEEeeccccCCCCC--cccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcCC-
Confidence 57888886665432211 01246899999998654 2 677 677789999999999988875 889999999732
Q ss_pred CCCCCCCCCCccEEEEEECcccc-----cCceEeeeEeeeecCCCCCccceEEEEEEEEe
Q 003882 456 LGGSGTKPDSRIGKVRIRLSTLE-----ADRIYTHSYPLLVLNPSGVKKMGELQLAVRFT 510 (789)
Q Consensus 456 ~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 510 (789)
.++|+.|.|++.+|. .+...+.|+.|+ +.|+|++.++|.
T Consensus 86 --------~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 --------VDLISETTVELYSLAERCRKNNGKTEIWLELK--------PQGRMLMNARYF 129 (138)
T ss_dssp --------CSCCEEEEEESHHHHHHHHHTTTCEEEEEECB--------SSCEEEEEEEEC
T ss_pred --------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEE
Confidence 379999999999998 456789999996 579999999874
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.82 E-value=4.6e-08 Score=84.64 Aligned_cols=114 Identities=18% Similarity=0.281 Sum_probs=84.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCee----eee-ccccCCCCCeeccEEEEEccCCCCceEEEEEEeCCCCC
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKLGNYK----GKT-RHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIVG 128 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~~~~~----~~T-~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~~ 128 (789)
..|+|.+.++.--.-+......||||.|.+.... .+| ..+++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT--
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC--
Confidence 5688888776543222234468999999998642 355 788889999999999999987 4799999996554
Q ss_pred CCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 129 RDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 129 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
+|++.|+|.+++|..+-.........|+.|++ .|.|++.+.+.
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-------QAKVLMSVQYF 124 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-------SCEEEEEEEEE
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEe
Confidence 89999999999998441000112338999987 57888887664
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.76 E-value=6.4e-08 Score=84.85 Aligned_cols=114 Identities=16% Similarity=0.371 Sum_probs=85.7
Q ss_pred eEEEEEEEEeeCCCCCC-CCCCCCcEEEEEECCe----eeee-ccccCCCCCeeccEEEEEccCCCCceEEEEEEeCCCC
Q 003882 54 FYLYVRVEKARDLPTNP-VSGSCDPYVEVKLGNY----KGKT-RHFEKKSNPEWKQVFAFSKEKIQSSVLEVFVRDREIV 127 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~-~~g~~dpyv~v~~~~~----~~~T-~~~~~t~nP~wne~f~f~~~~~~~~~l~v~V~d~~~~ 127 (789)
..|+|.+.++.--+.+. .....||||.|.+... ..+| ..+++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV- 86 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC-
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC-
Confidence 56888888776544332 1346899999999863 3677 778889999999999999887 4799999996543
Q ss_pred CCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEe
Q 003882 128 GRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIG 180 (789)
Q Consensus 128 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 180 (789)
+|+..|+|.+.+|..+-.........|+.|++ .|.|++.+.+.
T Consensus 87 ---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-------~Gkl~v~i~~~ 129 (138)
T 2enj_A 87 ---DLISETTVELYSLAERCRKNNGKTEIWLELKP-------QGRMLMNARYF 129 (138)
T ss_dssp ---SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-------SCEEEEEEEEC
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEE
Confidence 89999999999999430000112338999987 58899888875
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=94.07 E-value=0.25 Score=44.72 Aligned_cols=124 Identities=12% Similarity=0.052 Sum_probs=84.8
Q ss_pred eEEEEEEEEeeCCCCC-CCCCCCCcEEEEEEC--C-eeeeeccccCCCCCeeccEEEEEccCC-------CCceEEEEEE
Q 003882 54 FYLYVRVEKARDLPTN-PVSGSCDPYVEVKLG--N-YKGKTRHFEKKSNPEWKQVFAFSKEKI-------QSSVLEVFVR 122 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~-~~~g~~dpyv~v~~~--~-~~~~T~~~~~t~nP~wne~f~f~~~~~-------~~~~l~v~V~ 122 (789)
..+.|+|.++.-=+.. ...+..+|..-+++. . +.+.|.++. ..+|.+|.+-.|.+... .+..+.++++
T Consensus 18 nlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELh 96 (156)
T 2yrb_A 18 NLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVH 96 (156)
T ss_dssp EEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEE
Confidence 8899999998632211 002235776666554 4 345555555 88999999999987432 3568899998
Q ss_pred eCCCCCCCceeEEEEEEccccCCCCCCCCCCCCeeEEcccCCCCCccceEEEEEEEEeecC
Q 003882 123 DREIVGRDDYIGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRDDRKVKGEVMLAVWIGTQA 183 (789)
Q Consensus 123 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~~ 183 (789)
.... +....||.+.|+|.++..+... .....+|....+.....|.|.+.+++..+.
T Consensus 97 qa~g-~~~~tla~~~I~l~~lLe~~~~----i~g~~~L~g~~g~~~~~G~LeywiRL~~Pi 152 (156)
T 2yrb_A 97 QAYS-TEYETIAACQLKFHEILEKSGR----IFCTASLIGTKGDIPNFGTVEYWFRLRVSG 152 (156)
T ss_dssp EECS-SCEEEEEEEEECCSHHHHCCSC----EEEEEEECBSSSCCTTSEEEEEEEEEEECC
T ss_pred EeeC-CCceEEEEEEEEhHHhhCcCCc----eEEEEEEEcCCCCcceEEEEEEEEEEeccc
Confidence 8754 3567999999999999966431 114557777665324689999988886543
No 100
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=89.20 E-value=7.6 Score=37.22 Aligned_cols=40 Identities=20% Similarity=0.323 Sum_probs=33.1
Q ss_pred eeeeccccCCCCCeeccEEEEEc--cCCCCceEEEEEEeCCC
Q 003882 87 KGKTRHFEKKSNPEWKQVFAFSK--EKIQSSVLEVFVRDREI 126 (789)
Q Consensus 87 ~~~T~~~~~t~nP~wne~f~f~~--~~~~~~~l~v~V~d~~~ 126 (789)
.++|.|...+.+|.|+|++.+.+ .......|.|+++....
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 56889999999999999999987 33457899999987654
No 101
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=87.20 E-value=2.4 Score=38.30 Aligned_cols=123 Identities=13% Similarity=0.222 Sum_probs=79.1
Q ss_pred CccEEEEEEEEccCCCCCccCCCCCCcCc--EEEEEE-CCEEEeeccccCCCCCccccEEEEEEeCC--------CceEE
Q 003882 379 PIGILEVGILSAQGLLPMKTRDGRGTTDA--YCVAKY-GLKWVRTRTLVDNFNPKWNEQYTWEVYDP--------CTVIT 447 (789)
Q Consensus 379 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dp--yv~v~~-~~~~~~T~~~~~t~~P~wne~~~f~v~~~--------~~~l~ 447 (789)
..+.+.|+|.++. +.+.-. ...+..+| ||.+.+ +-+..-|.++. ..+|.+|-+..|.|.-. ...+.
T Consensus 16 gEnlfEihi~~~~-~~~~~l-~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 16 GENLFEIHINKVT-FSSEVL-QASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SCEEEEEEEEEEC-CCHHHH-HHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCcEEEEEEeEEE-EcHHHH-hhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 3468899988876 322100 00122345 555555 34556666655 88999999999988532 34788
Q ss_pred EEEEeCCCCCCCCCCCCCccEEEEEECcccccCc-eEeeeEeeeecCCCCCccceEEEEEEEEee
Q 003882 448 LGVFDNCHLGGSGTKPDSRIGKVRIRLSTLEADR-IYTHSYPLLVLNPSGVKKMGELQLAVRFTC 511 (789)
Q Consensus 448 v~v~d~~~~~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~ 511 (789)
|++..... ..-..||.++|+|.++...+ ......+|.+..+ +....|.|+..+++..
T Consensus 93 lELhqa~g------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g-~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 93 LEVHQAYS------TEYETIAACQLKFHEILEKSGRIFCTASLIGTKG-DIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEECS------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSS-CCTTSEEEEEEEEEEE
T ss_pred EEEEEeeC------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCC-CcceEEEEEEEEEEec
Confidence 88887533 14579999999999987543 3555667765432 2234699999998864
No 102
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=84.42 E-value=3.9 Score=48.53 Aligned_cols=69 Identities=17% Similarity=0.179 Sum_probs=50.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEE--CCe----eeeeccccCCCCCeeccEEEEEc--cC-CCCceEEEEEEeC
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKL--GNY----KGKTRHFEKKSNPEWKQVFAFSK--EK-IQSSVLEVFVRDR 124 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~--~~~----~~~T~~~~~t~nP~wne~f~f~~--~~-~~~~~l~v~V~d~ 124 (789)
..+.|+|..+.++... ...+-||.+.+ |++ ...|+.+.-..+|.|||.+.|++ .+ +....|.|.||+.
T Consensus 217 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp SEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 5799999999999754 34677877665 443 34565555577899999999985 34 3578999999996
Q ss_pred C
Q 003882 125 E 125 (789)
Q Consensus 125 ~ 125 (789)
.
T Consensus 294 ~ 294 (940)
T 2wxf_A 294 V 294 (940)
T ss_dssp C
T ss_pred c
Confidence 4
No 103
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=83.50 E-value=4.1 Score=48.30 Aligned_cols=92 Identities=12% Similarity=0.223 Sum_probs=62.6
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE--CCEE----EeeccccCCCCCccccEEEEEEe--C-C-CceEEEEE
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY--GLKW----VRTRTLVDNFNPKWNEQYTWEVY--D-P-CTVITLGV 450 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~~----~~T~~~~~t~~P~wne~~~f~v~--~-~-~~~l~v~v 450 (789)
..+.|+|..+.++... ...+-||.+.+ |++. ..|+.+.-..+|.|||.+.|++. + | .+.|.|+|
T Consensus 217 ~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp SEEEEEEEEEECCCC---------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CceEEEEEEecccCCC------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEE
Confidence 4899999999998752 34677888765 6654 45555555778999999999886 2 3 67999999
Q ss_pred EeCCCC--C-----CCCCCCCCccEEEEEECcccc
Q 003882 451 FDNCHL--G-----GSGTKPDSRIGKVRIRLSTLE 478 (789)
Q Consensus 451 ~d~~~~--~-----~~~~~~d~~lG~~~i~l~~l~ 478 (789)
|+...- + .+.+..+..||.+.++|-+-.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCTT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECCc
Confidence 995321 1 001113459999999998843
No 104
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=79.79 E-value=6.7 Score=46.94 Aligned_cols=92 Identities=22% Similarity=0.286 Sum_probs=62.1
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE--CCEE----EeeccccCCCCCccccEEEEEEe--C-C-CceEEEEE
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY--GLKW----VRTRTLVDNFNPKWNEQYTWEVY--D-P-CTVITLGV 450 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~~----~~T~~~~~t~~P~wne~~~f~v~--~-~-~~~l~v~v 450 (789)
..++|+|+.+.++... .....+-||.+.+ |++. .+|+.+. ..+|.|||.++|++. + | .+.|-|+|
T Consensus 355 ~~f~v~i~~~~~~n~~----~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl 429 (1091)
T 3hhm_A 355 SALRIKILCATYVNVN----IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSI 429 (1091)
T ss_dssp SEEEEEEEEESCCCCC----CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CCEEEEEEEecCCCCC----ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEE
Confidence 5899999999988642 1234677888876 5543 4444433 457889999999886 2 3 78999999
Q ss_pred EeCCCCCCCCCCCCCccEEEEEECcccc
Q 003882 451 FDNCHLGGSGTKPDSRIGKVRIRLSTLE 478 (789)
Q Consensus 451 ~d~~~~~~~~~~~d~~lG~~~i~l~~l~ 478 (789)
|+..... +.+.....||.+.++|-+-.
T Consensus 430 ~~~~~~~-~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 430 CSVKGRK-GAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCCCC--------CCEEEEEESBCTT
T ss_pred EEecCcc-CcccccceeEEeeeeeEccC
Confidence 9865421 11124568999999998743
No 105
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=78.64 E-value=6.1 Score=37.92 Aligned_cols=60 Identities=10% Similarity=0.082 Sum_probs=43.7
Q ss_pred EEEeeccccCCCCCccccEEEEEEeC---CCceEEEEEEeCCCCCCCCCCCCCccEEEEEECcc
Q 003882 416 KWVRTRTLVDNFNPKWNEQYTWEVYD---PCTVITLGVFDNCHLGGSGTKPDSRIGKVRIRLST 476 (789)
Q Consensus 416 ~~~~T~~~~~t~~P~wne~~~f~v~~---~~~~l~v~v~d~~~~~~~~~~~d~~lG~~~i~l~~ 476 (789)
..++|.+.+++.+|.|+|++.+.+.. +..-|.|++++...-. .....+..+|.+.+||-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~-k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQD-SKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCS-SCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccc-cccccCCeeEEEEEEccc
Confidence 34889999999999999999998874 3678999998865421 011133578888888754
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=76.40 E-value=9 Score=45.84 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=57.0
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEE--CCe----eeeeccccCCCCCeeccEEEEEc--cC-CCCceEEEEEEeC
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKL--GNY----KGKTRHFEKKSNPEWKQVFAFSK--EK-IQSSVLEVFVRDR 124 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~--~~~----~~~T~~~~~t~nP~wne~f~f~~--~~-~~~~~l~v~V~d~ 124 (789)
..+.|+|..+.++.... ....+-||.+.+ |++ ..+|+.+. ..+|.|||.+.|++ .+ +....|.|.||+.
T Consensus 355 ~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 355 SALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp SEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 57999999999886433 334677888776 332 33454443 45788999999986 34 3578999999987
Q ss_pred CCCC----CCceeEEEEEEccc
Q 003882 125 EIVG----RDDYIGKVVFDMNE 142 (789)
Q Consensus 125 ~~~~----~d~~lG~~~i~l~~ 142 (789)
.... ....||-+.++|-+
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFD 454 (1091)
T ss_dssp CCCC-------CCEEEEEESBC
T ss_pred cCccCcccccceeEEeeeeeEc
Confidence 6421 12345555555544
No 107
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=71.31 E-value=14 Score=43.90 Aligned_cols=71 Identities=13% Similarity=0.147 Sum_probs=47.1
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEE--CCe---eeeeccccCCCCCeeccEEEEEc--cC-CCCceEEEEEEeCC
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEVKL--GNY---KGKTRHFEKKSNPEWKQVFAFSK--EK-IQSSVLEVFVRDRE 125 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v~~--~~~---~~~T~~~~~t~nP~wne~f~f~~--~~-~~~~~l~v~V~d~~ 125 (789)
..+.|+|+.+....... ...++-||++.+ |++ ..+|+.+.-+.+|.|||.+.|++ .+ +....|.|.||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 46888899887522111 234577877654 553 23455555566899999999975 34 35789999999854
No 108
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=70.97 E-value=4.7 Score=48.44 Aligned_cols=92 Identities=14% Similarity=0.199 Sum_probs=60.0
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE--CCEE----EeeccccCCCCCccccEEEEEEeC---C-CceEEEEE
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY--GLKW----VRTRTLVDNFNPKWNEQYTWEVYD---P-CTVITLGV 450 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~~----~~T~~~~~t~~P~wne~~~f~v~~---~-~~~l~v~v 450 (789)
..++|+|..+.++... ...+-||.+.+ |++. ..|+.+.-..+|.|||.+.|++.- | .+.|.|+|
T Consensus 353 ~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp SEEEEEECCCCCCCCC------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred CCEEEEEEEeccCCCC------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 5899999999998653 24577777544 7665 445554446789999999998862 3 67999999
Q ss_pred EeCCCCCCC-----------------CCCCCCccEEEEEECcccc
Q 003882 451 FDNCHLGGS-----------------GTKPDSRIGKVRIRLSTLE 478 (789)
Q Consensus 451 ~d~~~~~~~-----------------~~~~d~~lG~~~i~l~~l~ 478 (789)
|+......+ .++.+..||.+.++|-+-.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCTT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 986421100 0112459999999998743
No 109
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=67.08 E-value=17 Score=43.08 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=58.7
Q ss_pred cEEEEEEEEccCCCCCccCCCCCCcCcEEEEEE--CCEE---EeeccccCCCCCccccEEEEEEe--C-C-CceEEEEEE
Q 003882 381 GILEVGILSAQGLLPMKTRDGRGTTDAYCVAKY--GLKW---VRTRTLVDNFNPKWNEQYTWEVY--D-P-CTVITLGVF 451 (789)
Q Consensus 381 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~~---~~T~~~~~t~~P~wne~~~f~v~--~-~-~~~l~v~v~ 451 (789)
..++|.|+.+...... .+..++-||.+.+ |++. .+|..+.-+.+|.|||.++|++. + | .+.|.|+||
T Consensus 218 ~~f~i~i~~~~~~~~~----~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP----RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp SEEEEEEEEEECSSCC----TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CceEEEEeeccccccc----CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEE
Confidence 4788888887642111 1234677888754 6654 34444434668999999999886 2 3 679999999
Q ss_pred eCCCCCCC-----------CCCCCCccEEEEEECcccc
Q 003882 452 DNCHLGGS-----------GTKPDSRIGKVRIRLSTLE 478 (789)
Q Consensus 452 d~~~~~~~-----------~~~~d~~lG~~~i~l~~l~ 478 (789)
+....+.. .+.....||.+.++|-+-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBCTT
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 75322100 0123568999999998843
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=61.42 E-value=10 Score=45.63 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=50.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEE--EECCe----eeeeccccCCCCCeeccEEEEEc--cCC-CCceEEEEEEeC
Q 003882 54 FYLYVRVEKARDLPTNPVSGSCDPYVEV--KLGNY----KGKTRHFEKKSNPEWKQVFAFSK--EKI-QSSVLEVFVRDR 124 (789)
Q Consensus 54 ~~L~V~v~~a~~L~~~~~~g~~dpyv~v--~~~~~----~~~T~~~~~t~nP~wne~f~f~~--~~~-~~~~l~v~V~d~ 124 (789)
..+.|+|..+.++... ...+-||.+ +-|++ ..+|+.+.-..+|.|||.+.|++ .++ ....|.|.||+.
T Consensus 353 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp SEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 5799999999999754 346777774 44554 23565555567899999999985 343 478999999996
Q ss_pred C
Q 003882 125 E 125 (789)
Q Consensus 125 ~ 125 (789)
.
T Consensus 430 ~ 430 (1092)
T 2y3a_A 430 L 430 (1092)
T ss_dssp -
T ss_pred c
Confidence 4
No 111
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=26.19 E-value=1.2e+02 Score=24.50 Aligned_cols=37 Identities=14% Similarity=0.293 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhccccCCchhh
Q 003882 694 YDRLRSVAGRIQTVVGDMATQGERFQALLSWRDPRAT 730 (789)
Q Consensus 694 ~~~l~~~~~~vq~~l~~~a~~~e~~~~l~~w~~p~~t 730 (789)
++.|.+-...++..-..+-....+++.-+-|++-+..
T Consensus 35 L~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~ 71 (91)
T 3hd7_A 35 LSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMM 71 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555555555666666667777788876554
Done!