Query 003883
Match_columns 789
No_of_seqs 251 out of 762
Neff 4.8
Searched_HMMs 46136
Date Thu Mar 28 13:43:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003883.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003883hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 4E-256 9E-261 2167.2 67.6 769 12-789 63-852 (852)
2 PLN00150 potassium ion transpo 100.0 2E-254 5E-259 2154.2 67.4 766 12-789 8-779 (779)
3 PLN00148 potassium transporter 100.0 7E-251 2E-255 2126.4 64.6 743 44-789 15-785 (785)
4 PLN00149 potassium transporter 100.0 3E-250 7E-255 2123.4 66.9 746 41-789 11-779 (779)
5 TIGR00794 kup potassium uptake 100.0 1E-227 3E-232 1925.8 60.2 684 53-789 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 2E-204 3E-209 1713.2 52.9 603 52-789 11-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 3E-195 7E-200 1626.0 40.8 529 54-622 1-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 2E-188 4E-193 1547.2 50.7 607 50-789 15-627 (627)
9 TIGR00911 2A0308 L-type amino 90.0 0.6 1.3E-05 53.8 6.6 87 217-307 165-255 (501)
10 COG0531 PotE Amino acid transp 82.2 7.8 0.00017 43.4 10.0 177 216-398 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 77.2 22 0.00048 39.9 11.6 169 217-398 133-316 (429)
12 TIGR03813 put_Glu_GABA_T putat 75.1 31 0.00067 39.6 12.3 19 498-516 434-452 (474)
13 TIGR00907 2A0304 amino acid pe 74.4 19 0.00042 41.3 10.4 25 218-242 144-168 (482)
14 PRK15049 L-asparagine permease 66.5 28 0.00062 40.6 9.6 22 220-241 147-168 (499)
15 TIGR00930 2a30 K-Cl cotranspor 66.2 43 0.00094 42.6 11.6 25 217-241 203-227 (953)
16 TIGR00906 2A0303 cationic amin 66.1 80 0.0017 37.6 13.3 45 217-261 161-208 (557)
17 PF13520 AA_permease_2: Amino 65.6 19 0.0004 40.3 7.6 222 217-454 118-366 (426)
18 PRK10655 potE putrescine trans 65.5 63 0.0014 36.6 11.9 43 219-261 125-170 (438)
19 PRK10435 cadB lysine/cadaverin 64.2 55 0.0012 37.2 11.1 23 220-242 124-146 (435)
20 PF14362 DUF4407: Domain of un 55.2 95 0.0021 33.8 10.6 53 438-490 14-70 (301)
21 KOG3145 Cystine transporter Cy 52.1 21 0.00045 39.7 4.8 40 282-322 287-343 (372)
22 PF06570 DUF1129: Protein of u 51.0 62 0.0013 33.5 7.9 21 497-517 179-199 (206)
23 TIGR00908 2A0305 ethanolamine 48.3 1E+02 0.0022 35.0 9.9 24 219-242 123-146 (442)
24 PRK10249 phenylalanine transpo 46.8 1E+02 0.0022 35.4 9.7 102 220-323 138-247 (458)
25 PRK11357 frlA putative fructos 44.3 2.3E+02 0.0049 32.3 11.8 45 218-262 128-175 (445)
26 PRK11021 putative transporter; 39.8 4.8E+02 0.01 29.3 13.4 27 217-243 115-141 (410)
27 TIGR00905 2A0302 transporter, 38.8 1.2E+02 0.0025 35.1 8.5 43 356-398 278-320 (473)
28 PRK10746 putative transport pr 38.2 1.8E+02 0.0039 33.6 9.9 31 43-79 10-40 (461)
29 PRK10644 arginine:agmatin anti 36.1 1.1E+02 0.0024 34.8 7.7 23 219-241 127-149 (445)
30 COG4059 MtrE Tetrahydromethano 35.8 33 0.00072 36.7 3.1 30 494-523 258-287 (304)
31 TIGR03810 arg_ornith_anti argi 35.6 4.4E+02 0.0095 30.4 12.5 45 355-399 273-317 (468)
32 TIGR01773 GABAperm gamma-amino 35.5 6E+02 0.013 29.0 13.5 25 219-243 128-152 (452)
33 PRK10238 aromatic amino acid t 34.5 1.9E+02 0.0041 33.3 9.3 113 220-336 129-250 (456)
34 COG2179 Predicted hydrolase of 33.4 9.9 0.00022 39.0 -1.1 68 717-785 47-118 (175)
35 PRK11387 S-methylmethionine tr 32.8 2.8E+02 0.006 32.0 10.3 30 43-78 14-43 (471)
36 TIGR00910 2A0307_GadC glutamat 31.3 3.5E+02 0.0075 31.8 10.9 46 295-340 202-249 (507)
37 PRK10580 proY putative proline 30.9 2.4E+02 0.0051 32.4 9.3 24 496-519 423-446 (457)
38 KOG3643 GABA receptor [Signal 29.8 42 0.00091 39.1 2.9 90 392-485 225-324 (459)
39 PRK11049 D-alanine/D-serine/gl 26.1 6.2E+02 0.013 29.2 11.6 104 294-398 218-332 (469)
40 COG1230 CzcD Co/Zn/Cd efflux s 24.5 3.8E+02 0.0082 30.0 9.0 165 300-532 44-219 (296)
41 TIGR03428 ureacarb_perm permea 23.1 1.2E+03 0.026 26.9 15.1 25 217-241 144-168 (475)
42 cd05900 Ig_Aggrecan Immunoglob 21.4 1.1E+02 0.0024 28.9 3.6 30 596-625 73-102 (112)
43 PF05545 FixQ: Cbb3-type cytoc 21.2 81 0.0018 25.5 2.3 29 506-534 19-47 (49)
44 TIGR01940 nqrE NADH:ubiquinone 20.7 3E+02 0.0065 29.1 6.9 47 418-464 14-62 (200)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=4.4e-256 Score=2167.18 Aligned_cols=769 Identities=48% Similarity=0.855 Sum_probs=699.3
Q ss_pred ccccccceeccccCCCCcchhhhhcccc--cccccccHHHHHHHHHhhcceeecccccchhhhhhcccCC-CCCCcCcEe
Q 003883 12 ETNKGSMWVLDQKLDQPMDEEAGRLRNM--YREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH-GIDDPEDII 88 (789)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~-~~~~~~~vl 88 (789)
+..++||||+++++|+ ++.|+++++++ |+.++.++|.++.|||||+|||||||||||||||+++|++ +.+++|||+
T Consensus 63 ~~~~~~~~~~~~~~d~-~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIl 141 (852)
T PLN00151 63 GNMRRRLIRTPPRVDS-FDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVL 141 (852)
T ss_pred cchhhhHhhCCCccch-hhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhhee
Confidence 4457899999999999 89999998877 4456778888899999999999999999999999999977 347999999
Q ss_pred hhHHHHHHHHHHhhhheeeeEEEeecCCCCChHHHHHHhhhcccccccCCCCCCCccchhhccccccc-cchhhhHHHHH
Q 003883 89 GALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH-EKSFAAKTKRW 167 (789)
Q Consensus 89 GvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~ 167 (789)
|+|||||||||||+++|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+.+.++ +.+++.++|++
T Consensus 142 GvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~ 221 (852)
T PLN00151 142 GALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKER 221 (852)
T ss_pred eehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988766 67778899999
Q ss_pred hhhhhhhHHHHHHHHhHhhhhhhcCccccccc---cccccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchh
Q 003883 168 LEHQTFRKNALLMLVLVGTCMVIGDGILTPAI---SASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFA 244 (789)
Q Consensus 168 le~~~~~~~~l~~l~l~G~~m~~gDGviTPAI---SAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~ 244 (789)
||+|+++|.+++++|++|+||+|||||||||| |||||||++.|++++++||||||+||++||++||+||+|||++||
T Consensus 222 lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~Fg 301 (852)
T PLN00151 222 LETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFG 301 (852)
T ss_pred hhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhc
Confidence 99999999999999999999999999999999 999999999999988999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhH
Q 003883 245 PIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTV 324 (789)
Q Consensus 245 PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~ 324 (789)
|||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||++
T Consensus 302 PImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~ 381 (852)
T PLN00151 302 PALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTC 381 (852)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEec
Q 003883 325 VVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHT 404 (789)
Q Consensus 325 ~V~P~L~L~Y~GQ~A~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhT 404 (789)
+|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+||
T Consensus 382 ~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHT 461 (852)
T PLN00151 382 LVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHT 461 (852)
T ss_pred hHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCceeehhhHHHHHHHhhheEEeecCchhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 003883 405 SKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVEC 484 (789)
Q Consensus 405 S~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~ 484 (789)
|++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|+
T Consensus 462 S~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~ 541 (852)
T PLN00151 462 SRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVEL 541 (852)
T ss_pred CCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchh
Q 003883 485 TYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPH 564 (789)
Q Consensus 485 ~f~sa~l~K~~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~ 564 (789)
+|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||||+|+|||++.+|+|+
T Consensus 542 ~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~ 621 (852)
T PLN00151 542 VFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPA 621 (852)
T ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999899999999999999999999
Q ss_pred hHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCC-ChHHHHHHHHHHHHHHHH
Q 003883 565 IFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHK-KDENFEKKLFDSLFLFVR 643 (789)
Q Consensus 565 ~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~-~~~~fe~~lv~~L~~fI~ 643 (789)
+|.||++|||++||++||||||++|+|+||++|||+++|+++++||+|||++||||||..+ ++++||++|+++|++|||
T Consensus 622 ~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~ 701 (852)
T PLN00151 622 IFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIR 701 (852)
T ss_pred HHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999986 789999999999999999
Q ss_pred hhhhccCCC---CCC-------CccccccccccccccccCC--CCCCCCCCccccccccCCC-CCcCCCccccccccCcc
Q 003883 644 LEAMMEGCS---DSD-------EYSLYGQQTLQSTDGLLNN--NGNSTSSNQDLTMSSVDSI-VPVKSPLHVNSTVMSSS 710 (789)
Q Consensus 644 ~e~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~vrf~~~~~~~~ 710 (789)
+|+.....+ +++ +++..........+..... ......+........+.+. .+..++++|. +
T Consensus 702 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 775 (852)
T PLN00151 702 REAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSS------D 775 (852)
T ss_pred hhhhhccccccccccccccccccccccccCCCccccccccccccccccccccccccccccccccccccccccc------c
Confidence 987432111 000 1111110000000000000 0000000000000000000 0001223331 1
Q ss_pred cCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003883 711 QMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 789 (789)
Q Consensus 711 ~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkAk~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvY~V 789 (789)
. +++++||+++|++|+|+||+||+||++||||++|+|+||++||++|+|||||||+|.++|+|||++|+||||+|||
T Consensus 776 ~--~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 776 E--DQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred c--CccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 1 5789999999999999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=2.2e-254 Score=2154.18 Aligned_cols=766 Identities=57% Similarity=1.005 Sum_probs=700.0
Q ss_pred ccccccceeccccCCCCcchhhhhcccccccccccHHHHHHHHHhhcceeecccccchhhhhhcccCC-CCCCcCcEehh
Q 003883 12 ETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH-GIDDPEDIIGA 90 (789)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~-~~~~~~~vlGv 90 (789)
|.+++||||+++++|+|+|+||++++++++.++.+|+.++.|||||+|||||||||||||||+++|++ +.+++|||+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~ilGv 87 (779)
T PLN00150 8 ESNQGRLWDLDQRITRPLGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVGVKNNDDIIGA 87 (779)
T ss_pred CCCccchhhCCCCCCCccCcchhhcccccccccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCCCCCHHHhHhH
Confidence 45789999999999999999999999997778999999999999999999999999999999999976 46899999999
Q ss_pred HHHHHHHHHHhhhheeeeEEEeecCCCCChHHHHHHhhhcccccccCCCCCCCccchhhccccccccchhhhHHHHHhhh
Q 003883 91 LSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEH 170 (789)
Q Consensus 91 lSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~ 170 (789)
|||||||||||+++|||+|||||||||||||||||||+|||+|++++|||++.|+++++|+++ +..+..++|++||+
T Consensus 88 LSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~---~~~r~~~~k~~lE~ 164 (779)
T PLN00150 88 LSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD---NMNRKTRIQRKLEN 164 (779)
T ss_pred HHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc---cchhhhHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999863 33344679999999
Q ss_pred hhhhHHHHHHHHhHhhhhhhcCccccccc---cccccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHH
Q 003883 171 QTFRKNALLMLVLVGTCMVIGDGILTPAI---SASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIV 247 (789)
Q Consensus 171 ~~~~~~~l~~l~l~G~~m~~gDGviTPAI---SAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm 247 (789)
|+.+|.+++++|++|+||+||||+||||| |||||||+..|++++++||||||+||++||++||+||+|||++|||||
T Consensus 165 ~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm 244 (779)
T PLN00150 165 SRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIF 244 (779)
T ss_pred chHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHH
Confidence 99999999999999999999999999999 999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHH
Q 003883 248 LLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVF 327 (789)
Q Consensus 248 ~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~~V~ 327 (789)
++||++||++|+|||++|||+||+|+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++||
T Consensus 245 ~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~ 324 (779)
T PLN00150 245 LCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVY 324 (779)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCc
Q 003883 328 PCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKK 407 (789)
Q Consensus 328 P~L~L~Y~GQ~A~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhTS~~ 407 (789)
|||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++
T Consensus 325 P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~ 404 (779)
T PLN00150 325 PCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNK 404 (779)
T ss_pred HHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeehhhHHHHHHHhhheEEeecCchhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 003883 408 FLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYF 487 (789)
Q Consensus 408 ~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~ 487 (789)
++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++||
T Consensus 405 ~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~ 484 (779)
T PLN00150 405 VHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYF 484 (779)
T ss_pred cCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHH
Q 003883 488 SAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFS 567 (789)
Q Consensus 488 sa~l~K~~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~~~~ 567 (789)
|||+.|||||||+||++|++++++|++||||++++++++.+|++|+++|.++.++.++.||||+|+|||++++|+|++|.
T Consensus 485 sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~ 564 (779)
T PLN00150 485 SAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFS 564 (779)
T ss_pred HHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999998888888889999999999999999999999
Q ss_pred HHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhh
Q 003883 568 HFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAM 647 (789)
Q Consensus 568 h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~fI~~e~~ 647 (789)
||++|||++||++||+|||++|+|+||++||++++|+++++|++|||++||||||..+++++||++|+++|++|||+|+.
T Consensus 565 h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~ 644 (779)
T PLN00150 565 HFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESF 644 (779)
T ss_pred HHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999998999999999999999988999999999999999999974
Q ss_pred ccCCCCCCCccccccccccccccccCCCC--CCCCCCccccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHH
Q 003883 648 MEGCSDSDEYSLYGQQTLQSTDGLLNNNG--NSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLN 725 (789)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vrf~~~~~~~~~~~~~~v~eEl~~L~ 725 (789)
..+.+ +++++.....++...++...... .............++...+..++++|. +. +++++||+++|+
T Consensus 645 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~v~eEl~~L~ 715 (779)
T PLN00150 645 REQSD-LESMAASWTPEELMGEGNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSVS------GH--SSDTQDEVAFLN 715 (779)
T ss_pred ccccc-ccccccccccccccccCCcccccccccccccccccccccccccccccccccc------cc--cccHHHHHHHHH
Confidence 32211 11222221110000000000000 000000000000000000111222321 11 578999999999
Q ss_pred HhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003883 726 SCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 789 (789)
Q Consensus 726 ~A~eaGVvYIlG~~~vkAk~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvY~V 789 (789)
+|+|+||+||+||++||||++|||+||++||++|+|||||||+|.++|+|||+||+||||+|||
T Consensus 716 ~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 716 KCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=7.1e-251 Score=2126.38 Aligned_cols=743 Identities=52% Similarity=0.924 Sum_probs=679.5
Q ss_pred cccHHH---HHHHHHhhcceeecccccchhhhhhcccCCC---CCCcCcEehhHHHHHHHHHHhhhheeeeEEEeecCCC
Q 003883 44 KFSSLL---LLRFAFQSLGVVYGDLGTSPLYVFYNTFPHG---IDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSG 117 (789)
Q Consensus 44 ~~~~~~---~l~La~~alGVVyGDIGTSPLYv~~~~f~~~---~~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~G 117 (789)
..+|+. ++.|||||+|||||||||||||||+++|+++ .+++|||+|+|||||||||||+++|||+|||||||||
T Consensus 15 ~~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~G 94 (785)
T PLN00148 15 QLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNG 94 (785)
T ss_pred cchhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCC
Confidence 345655 7899999999999999999999999999752 3899999999999999999999999999999999999
Q ss_pred CChHHHHHHhhhcccccccCCCCCCCccchhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccc
Q 003883 118 QGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTP 197 (789)
Q Consensus 118 EGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTP 197 (789)
||||||||||+|||+|++++||||++|+++++|++..+...+++.++|++||+|+++|.+++++|++|+||+||||+|||
T Consensus 95 EGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTP 174 (785)
T PLN00148 95 EGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQTVGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTP 174 (785)
T ss_pred CchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccchhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccch
Confidence 99999999999999999999999999999999988666655667889999999999999999999999999999999999
Q ss_pred cc---cccccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecC
Q 003883 198 AI---SASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFS 274 (789)
Q Consensus 198 AI---SAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~Aln 274 (789)
|| |||||||++.|++++++||||||+||++||++||+||+|||++|||||++||++|+++|+|||++|||+||+|||
T Consensus 175 AISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~Aln 254 (785)
T PLN00148 175 AISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALS 254 (785)
T ss_pred hHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcC
Confidence 99 999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccc
Q 003883 275 PVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYR 354 (789)
Q Consensus 275 P~ya~~f~~~~g~~g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFy~ 354 (789)
|+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+
T Consensus 255 P~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~ 334 (785)
T PLN00148 255 PYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYD 334 (785)
T ss_pred HHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheEEeecC
Q 003883 355 SIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKN 434 (789)
Q Consensus 355 ~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~ 434 (789)
++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 335 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 414 (785)
T PLN00148 335 SIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRD 414 (785)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhh
Q 003883 435 QSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYV 514 (789)
Q Consensus 435 s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGW~pl~la~v~~~iM~~ 514 (789)
|++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.|||||||+||++|++++++|++
T Consensus 415 s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 494 (785)
T PLN00148 415 TTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYI 494 (785)
T ss_pred chhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccC
Q 003883 515 WHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVP 594 (789)
Q Consensus 515 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~ 594 (789)
||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||+|||++|+|+||
T Consensus 495 W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~ 574 (785)
T PLN00148 495 WHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVS 574 (785)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999988888889999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCC------CCCCCcccccccccc-c
Q 003883 595 EEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGC------SDSDEYSLYGQQTLQ-S 667 (789)
Q Consensus 595 ~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~fI~~e~~~~~~------~~~~~~~~~~~~~~~-~ 667 (789)
++||++++|+++++|++|||++||||||..+++++||++|+++|++|||+|+...+. +++++++++++.++. .
T Consensus 575 ~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (785)
T PLN00148 575 PEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSS 654 (785)
T ss_pred hhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999889999999999999999998843210 112233333221110 0
Q ss_pred cccccCC-------CC-CCCCCCcc---ccccccCC-CCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEE
Q 003883 668 TDGLLNN-------NG-NSTSSNQD---LTMSSVDS-IVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHI 735 (789)
Q Consensus 668 ~~~~~~~-------~~-~~~~~~~~---~~~~~~~~-~~~~~~~vrf~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYI 735 (789)
.....++ .. .+..+... .+..+.++ ....+++++|+... +.+. +++++||+++|++|+|+||+||
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~El~~L~~A~eaGVvYI 731 (785)
T PLN00148 655 SLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPE-NPGM--DPSVREELMDLIEAKEAGVAYI 731 (785)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeecccc-cccc--cchHHHHHHHHHHHHHcCcEEE
Confidence 0000000 00 00000000 01111111 12345678886322 2223 6789999999999999999999
Q ss_pred eeecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003883 736 LGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 789 (789)
Q Consensus 736 lG~~~vkAk~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvY~V 789 (789)
+||++||||++|||+||++||++|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 732 lG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 732 MGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred eccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999999999999999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=3e-250 Score=2123.37 Aligned_cols=746 Identities=50% Similarity=0.878 Sum_probs=675.5
Q ss_pred ccccccHHHHHHHHHhhcceeecccccchhhhhhcccCCC---CCCcCcEehhHHHHHHHHHHhhhheeeeEEEeecCCC
Q 003883 41 REKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHG---IDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSG 117 (789)
Q Consensus 41 ~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~---~~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~G 117 (789)
|.++.+|+.++.|||||+|||||||||||||||+++|+++ .+++|||+|+|||||||||||+++|||+|||||||||
T Consensus 11 ~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~iKYv~ivlrAdn~G 90 (779)
T PLN00149 11 HVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNG 90 (779)
T ss_pred ccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhhhhEEEEEEecCCC
Confidence 4456889998999999999999999999999999999753 3899999999999999999999999999999999999
Q ss_pred CChHHHHHHhhhcccccccCCCCCCCccchhhccccccc----cchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCc
Q 003883 118 QGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH----EKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDG 193 (789)
Q Consensus 118 EGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~----~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDG 193 (789)
||||||||||+|||+|++++||||++|+++++|+++.+. +.+++.++|++||+|+.+|.+++++|++|+||+||||
T Consensus 91 EGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l~l~G~~m~igDg 170 (779)
T PLN00149 91 EGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDG 170 (779)
T ss_pred CchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999887644 2344688999999999999999999999999999999
Q ss_pred cccccc---cccccccccCCCCCCceE-ehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcce
Q 003883 194 ILTPAI---SASGGIKVDHPHMSNGVV-VLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSV 269 (789)
Q Consensus 194 viTPAI---SAVeGl~v~~p~l~~~~V-v~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~~Wf~~i~~iGiynI~~~~P~V 269 (789)
|||||| ||||||++..|...++++ |||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+|
T Consensus 171 vlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~V 250 (779)
T PLN00149 171 VLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHV 250 (779)
T ss_pred ccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhH
Confidence 999999 999999999976545455 9999999999999999999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCc---
Q 003883 270 LKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQD--- 346 (789)
Q Consensus 270 l~AlnP~ya~~f~~~~g~~g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~--- 346 (789)
|+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+
T Consensus 251 l~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~ 330 (779)
T PLN00149 251 YQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIES 330 (779)
T ss_pred hhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cccccccccccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhh
Q 003883 347 HVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCI 426 (789)
Q Consensus 347 ~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhTS~~~~GQIYIP~vNw~Lmi~~l 426 (789)
+++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+
T Consensus 331 ~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i 410 (779)
T PLN00149 331 DYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCL 410 (779)
T ss_pred cccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHH
Confidence 56679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred heEEeecCchhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHH
Q 003883 427 AVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAA 506 (789)
Q Consensus 427 ~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGW~pl~la~ 506 (789)
++|++||||++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||+.|||||||+||++|+
T Consensus 411 ~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~ 490 (779)
T PLN00149 411 AVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSF 490 (779)
T ss_pred hheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEE
Q 003883 507 AFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK 586 (789)
Q Consensus 507 v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~~~~h~l~~~~~lh~~~Vfl~i~ 586 (789)
+++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||+|||
T Consensus 491 v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik 570 (779)
T PLN00149 491 IFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIK 570 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEE
Confidence 99999999999999999999999999999999988888899999999999999999999999999999999999999999
Q ss_pred EeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCC--C----CCCCcccc
Q 003883 587 YLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGC--S----DSDEYSLY 660 (789)
Q Consensus 587 ~~~vP~V~~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~fI~~e~~~~~~--~----~~~~~~~~ 660 (789)
++|+|+||++||++++|++++++++|||++||||||..+++++||++|+++|++|||+|+...+. + +++++++.
T Consensus 571 ~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~ 650 (779)
T PLN00149 571 SVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVV 650 (779)
T ss_pred ECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccc
Confidence 99999999999999999999999999999999999999989999999999999999998742211 1 12233333
Q ss_pred ccccc-cccccccC-CC-CCCCCCCccccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEee
Q 003883 661 GQQTL-QSTDGLLN-NN-GNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILG 737 (789)
Q Consensus 661 ~~~~~-~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~vrf~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG 737 (789)
++.+. .......+ +. ...+.+....+...+.+....++++||+... +.+. +++++||+++|++|||+||+||+|
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~v~eEl~~L~~A~eaGVvYIlG 727 (779)
T PLN00149 651 GTCSTHLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPE-SPKI--DRGAREELQELMEAREAGMAYILG 727 (779)
T ss_pred ccccccccccccccccccccccccccccccccCccccCcccceeecccc-cccc--chhHHHHHHHHHHHHHcCcEEEec
Confidence 32111 00000000 00 0000000000000111111223577876332 2223 678999999999999999999999
Q ss_pred ecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003883 738 NTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 789 (789)
Q Consensus 738 ~~~vkAk~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvY~V 789 (789)
|++||||++|||+||++|||+|+|||||||+|.++|+|||+|||||||+|||
T Consensus 728 ~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 728 HSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred CceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=1.2e-227 Score=1925.76 Aligned_cols=684 Identities=43% Similarity=0.772 Sum_probs=651.3
Q ss_pred HHHhhcceeecccccchhhhhhcccCCCCCCcCcEehhHHHHHHHHHHhhhheeeeEEEeecCCCCChHHHHHHhhhccc
Q 003883 53 FAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHA 132 (789)
Q Consensus 53 La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~~ 132 (789)
|++||||||||||||||||||+++|+++.+++|||+|+||||||||||++++|||++||||||||||||||||||+||++
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~~ 80 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSGGFPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRYA 80 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhc
Confidence 57999999999999999999999997656899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccchhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccccc---cccccccccC
Q 003883 133 KVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAI---SASGGIKVDH 209 (789)
Q Consensus 133 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAI---SAVeGl~v~~ 209 (789)
|.+..|+|++.|+++++|+...+++.+++.++|+++|++++.|++++++|++|+||+||||+||||| ||||||+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v~~ 160 (688)
T TIGR00794 81 KISARPVHQELDRAESSYSTKSPNLLNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEIVA 160 (688)
T ss_pred cccCCCcccchhhhhhhcccccccccchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccC
Confidence 9999999999999999999888777777889999999999999999999999999999999999999 9999999999
Q ss_pred CCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcce
Q 003883 210 PHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDG 289 (789)
Q Consensus 210 p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g 289 (789)
|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||+.|
T Consensus 161 p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~ 240 (688)
T TIGR00794 161 PSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVG 240 (688)
T ss_pred CCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCce
Confidence 99988899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHH
Q 003883 290 WTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVAT 369 (789)
Q Consensus 290 ~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFy~~~P~~~~~P~~vlAt 369 (789)
|.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||
T Consensus 241 ~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAt 320 (688)
T TIGR00794 241 WVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIAT 320 (688)
T ss_pred eeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheEEeecCchhhhhhhhchhhHH
Q 003883 370 AAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIV 449 (789)
Q Consensus 370 lAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~ 449 (789)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++|
T Consensus 321 lAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~t 400 (688)
T TIGR00794 321 LAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGT 400 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhc
Q 003883 450 MLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHS 529 (789)
Q Consensus 450 M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~ 529 (789)
|++||+|+++||+.+||||++++++|+++|+.+|++|||||+.|+|||||+||++|++++++|++|+|||+++++++.+|
T Consensus 401 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~ 480 (688)
T TIGR00794 401 FLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEH 480 (688)
T ss_pred hHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCC-CCCCCccCceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCC
Q 003883 530 KVSMAWILGLGP-SLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKN 608 (789)
Q Consensus 530 ~~~~~~~~~~~~-~~~~~rvpG~~vf~t~~~~gvP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~ 608 (789)
++|+++|++.+. +.+.+|+||+|+|||++++++|++|.||++|||++||++||+||+++|+|+||++||++++++++++
T Consensus 481 ~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~ 560 (688)
T TIGR00794 481 RVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTE 560 (688)
T ss_pred CCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCC
Confidence 999999988554 4445899999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCcccccc
Q 003883 609 FHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMS 688 (789)
Q Consensus 609 ~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (789)
|+|||++||||||+||+|++|+++++++|++||+++..... . + + +.. .
T Consensus 561 -g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~~-~---------~----~--------------~~~---~ 608 (688)
T TIGR00794 561 -GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFNL-N---------N----L--------------EEL---S 608 (688)
T ss_pred -CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhcc-c---------c----c--------------ccc---c
Confidence 89999999999999999999999999999999998642100 0 0 0 000 0
Q ss_pred ccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccC
Q 003883 689 SVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRE 768 (789)
Q Consensus 689 ~~~~~~~~~~~vrf~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkAk~~Ss~lKK~vIn~~Y~FLRkNcR~ 768 (789)
++ +. +.+.+||++++++|+|+|++|++||++++++++|+++||+.||++|.|||||||+
T Consensus 609 -~~----------------~~----~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~ 667 (688)
T TIGR00794 609 -DK----------------RC----RMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARR 667 (688)
T ss_pred -cc----------------cc----ccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccC
Confidence 00 00 1235789999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCeEeeeeEEEC
Q 003883 769 NSVIFNVPHESLLNVGQIFYV 789 (789)
Q Consensus 769 ~~~~L~IPh~~LlEVGMvY~V 789 (789)
+...++|||+|++||||.||+
T Consensus 668 ~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 668 APKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred hhhheeCChhhEEEEeeEEEC
Confidence 999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=1.5e-204 Score=1713.18 Aligned_cols=603 Identities=30% Similarity=0.552 Sum_probs=572.0
Q ss_pred HHHHhhcceeecccccchhhhhhcccCCC--C-CCcCcEehhHHHHHHHHHHhhhheeeeEEEeecCCCCChHHHHHHhh
Q 003883 52 RFAFQSLGVVYGDLGTSPLYVFYNTFPHG--I-DDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLL 128 (789)
Q Consensus 52 ~La~~alGVVyGDIGTSPLYv~~~~f~~~--~-~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl 128 (789)
.++++|||||||||||||||||+++|.++ . +++|||+|++||||||||+++++|||+++|||||||||||||||||+
T Consensus 11 ~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~ 90 (622)
T PRK10745 11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLA 90 (622)
T ss_pred HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHH
Confidence 38899999999999999999999999762 2 89999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCCCCccchhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccccc---cccccc
Q 003883 129 CRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAI---SASGGI 205 (789)
Q Consensus 129 ~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAI---SAVeGl 205 (789)
+|+.+ ++.|.+++++|++|+||+||||+||||| ||||||
T Consensus 91 ~~~~~--------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEGL 132 (622)
T PRK10745 91 GRNTS--------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGL 132 (622)
T ss_pred hhhcc--------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhcc
Confidence 77543 1245578999999999999999999999 999999
Q ss_pred cccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhc
Q 003883 206 KVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRG 285 (789)
Q Consensus 206 ~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~ 285 (789)
|+..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||+|+++||.+|
T Consensus 133 ~v~~p~l~-~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~ 210 (622)
T PRK10745 133 EIVAPQLD-TYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEY 210 (622)
T ss_pred cccCCCCC-CccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhC
Confidence 99999994 59999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred CcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHHHH
Q 003883 286 GRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVF 365 (789)
Q Consensus 286 g~~g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFy~~~P~~~~~P~~ 365 (789)
|..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++
T Consensus 211 ~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~v 290 (622)
T PRK10745 211 KTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLL 290 (622)
T ss_pred CCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheEEeecCchhhhhhhhch
Q 003883 366 IVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTA 445 (789)
Q Consensus 366 vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiA 445 (789)
++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+|
T Consensus 291 iLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiA 370 (622)
T PRK10745 291 ILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIA 370 (622)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHH
Q 003883 446 VVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEF 525 (789)
Q Consensus 446 V~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~ 525 (789)
|++||++||+|++++++.+|+|+++++++++++|+++|++||+||+.|++||||+|+++|++++++|++|++||++++++
T Consensus 371 Vt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~ 450 (622)
T PRK10745 371 VTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRR 450 (622)
T ss_pred heeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEec
Q 003883 526 EMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIG 605 (789)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~ 605 (789)
+.++++|+++|++.+++.++.||||+|+|||+..+++|+++.||+||||++||++||+||+++|+|+||++||+++++++
T Consensus 451 ~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~ 530 (622)
T PRK10745 451 MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLS 530 (622)
T ss_pred HHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEEC
Confidence 99999999999999888787899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCccc
Q 003883 606 PKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDL 685 (789)
Q Consensus 606 ~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (789)
+ |+|||++||||||+||+|+.+++. +.+.
T Consensus 531 ~---g~~rv~~~yGf~e~~~i~~~L~~~---------~~~g--------------------------------------- 559 (622)
T PRK10745 531 P---TFWRVVASYGWRETPNVEEVFHRC---------GLEG--------------------------------------- 559 (622)
T ss_pred C---CEEEEEEEecCCCCCCHHHHHHHH---------HhCC---------------------------------------
Confidence 6 799999999999999998776431 0000
Q ss_pred cccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCc---hhHHHHHHHHHHHH
Q 003883 686 TMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSK---FYKKIAIDYIYAFL 762 (789)
Q Consensus 686 ~~~~~~~~~~~~~~vrf~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkAk~~Ss---~lKK~vIn~~Y~FL 762 (789)
.+++ . ..++|.+||+.++..++++ |-|| +|.||
T Consensus 560 --------------~~~~--~-----------------------~~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m 595 (622)
T PRK10745 560 --------------LSCR--M-----------------------METSFFMSHESLILGKRPWYLRLRGK-----LFLLL 595 (622)
T ss_pred --------------CCCC--c-----------------------cceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHH
Confidence 0000 0 1579999999999888887 6565 68999
Q ss_pred HhhccCCCcccccCCCCeEeeeeEEEC
Q 003883 763 RKICRENSVIFNVPHESLLNVGQIFYV 789 (789)
Q Consensus 763 RkNcR~~~~~L~IPh~~LlEVGMvY~V 789 (789)
.||++++...+++|++|++|+|+.+|+
T Consensus 596 ~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 596 QRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred HHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 999999999999999999999999985
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=3.2e-195 Score=1625.95 Aligned_cols=529 Identities=47% Similarity=0.819 Sum_probs=516.4
Q ss_pred HHhhcceeecccccchhhhhhcccC--CCCCCcCcEehhHHHHHHHHHHhhhheeeeEEEeecCCCCChHHHHHHhhhcc
Q 003883 54 AFQSLGVVYGDLGTSPLYVFYNTFP--HGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRH 131 (789)
Q Consensus 54 a~~alGVVyGDIGTSPLYv~~~~f~--~~~~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~ 131 (789)
|++|+|||||||||||||||+++|. +..+++|||+|+||||||||||++++|||+++|||||||||||||||||+||.
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~ 80 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIFGSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRF 80 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHh
Confidence 6899999999999999999999993 24599999999999999999999999999999999999999999999999853
Q ss_pred cccccCCCCCCCccchhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccccc---ccccccccc
Q 003883 132 AKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAI---SASGGIKVD 208 (789)
Q Consensus 132 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAI---SAVeGl~v~ 208 (789)
.+ ++++.|..++++|++|+||+||||+||||| ||||||++.
T Consensus 81 ~~------------------------------------~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v~ 124 (534)
T PF02705_consen 81 LK------------------------------------SSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEVA 124 (534)
T ss_pred hc------------------------------------cchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhcc
Confidence 33 345677778999999999999999999999 999999999
Q ss_pred CCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcc
Q 003883 209 HPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRD 288 (789)
Q Consensus 209 ~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~ 288 (789)
.|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++| |+||+|+||+|+++||.+||+.
T Consensus 125 ~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~~-p~Vl~A~nP~yai~f~~~~~~~ 202 (534)
T PF02705_consen 125 TPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQH-PEVLKALNPYYAIRFFIRNGWI 202 (534)
T ss_pred CCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhC-HHHHHHhCHHHHHHHHHHcCCc
Confidence 99997 799999999999999999999999999999999999999999999999995 9999999999999999999999
Q ss_pred eeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHH
Q 003883 289 GWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVA 368 (789)
Q Consensus 289 g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFy~~~P~~~~~P~~vlA 368 (789)
||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++|
T Consensus 203 ~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilA 282 (534)
T PF02705_consen 203 GFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILA 282 (534)
T ss_pred hhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheEEeecCchhhhhhhhchhhH
Q 003883 369 TAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVI 448 (789)
Q Consensus 369 tlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~ 448 (789)
|+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||++
T Consensus 283 tlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~ 362 (534)
T PF02705_consen 283 TLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTG 362 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 003883 449 VMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMH 528 (789)
Q Consensus 449 ~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~ 528 (789)
||++||+|++++++.+||||.+++++++++|+.+|+.||+||+.|++||||+|+++|++++++|++|+|||+++++++++
T Consensus 363 tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~ 442 (534)
T PF02705_consen 363 TMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFERE 442 (534)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCC
Q 003883 529 SKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKN 608 (789)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~ 608 (789)
+++++++++++.++.++.|+||+|+|+|+..+++|+++.||++||+++||+++|+|++++|+|+||++||++++++++
T Consensus 443 ~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~-- 520 (534)
T PF02705_consen 443 NKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP-- 520 (534)
T ss_pred cCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCEEEEEEEeeccc
Q 003883 609 FHMFRCVARYGYKD 622 (789)
Q Consensus 609 ~~~yr~~~ryGy~d 622 (789)
+|+|||++||||||
T Consensus 521 ~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 521 DGFYRVTLRYGFME 534 (534)
T ss_pred CCEEEEEEEecCCC
Confidence 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-188 Score=1547.20 Aligned_cols=607 Identities=34% Similarity=0.626 Sum_probs=575.9
Q ss_pred HHHHHHhhcceeecccccchhhhhhcccCC--CC-CCcCcEehhHHHHHHHHHHhhhheeeeEEEeecCCCCChHHHHHH
Q 003883 50 LLRFAFQSLGVVYGDLGTSPLYVFYNTFPH--GI-DDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYS 126 (789)
Q Consensus 50 ~l~La~~alGVVyGDIGTSPLYv~~~~f~~--~~-~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALys 126 (789)
+..+.++|+|||||||||||||+++++|.. +. .++++|+|++||||||||+|||+|||+++|||||||||||++|++
T Consensus 15 ~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~a 94 (627)
T COG3158 15 TKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLMA 94 (627)
T ss_pred chhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHHH
Confidence 456899999999999999999999999986 33 789999999999999999999999999999999999999999999
Q ss_pred hhhcccccccCCCCCCCccchhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccccc---cccc
Q 003883 127 LLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAI---SASG 203 (789)
Q Consensus 127 Ll~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGviTPAI---SAVe 203 (789)
|++|.++ +...++.++|++|+|+++|||+||||| ||||
T Consensus 95 L~~~~~~---------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAvE 135 (627)
T COG3158 95 LARRAAP---------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSAVE 135 (627)
T ss_pred HHHhhcC---------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHHhc
Confidence 9988765 145589999999999999999999999 9999
Q ss_pred cccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHH
Q 003883 204 GIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFR 283 (789)
Q Consensus 204 Gl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~ 283 (789)
||+++.|.++ ++|+|||++||++||++||+||++||++|||||++||+++|..|++||+. ||+||+|+|||||++|+.
T Consensus 136 GL~iv~p~~~-~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~ 213 (627)
T COG3158 136 GLEIVTPALD-PYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLL 213 (627)
T ss_pred cccccCcccc-CccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHH
Confidence 9999999996 69999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred hcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHH
Q 003883 284 RGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWP 363 (789)
Q Consensus 284 ~~g~~g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFy~~~P~~~~~P 363 (789)
++|..||+.||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++||++..||||.++|+|++||
T Consensus 214 ~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP 293 (627)
T COG3158 214 EEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIP 293 (627)
T ss_pred hCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheEEeecCchhhhhhhh
Q 003883 364 VFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYG 443 (789)
Q Consensus 364 ~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYG 443 (789)
+++|||+||||||||+|||+||++|||++||++|||||.|||+++.||||||.|||+|+++++.++++||+|++||+|||
T Consensus 294 ~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYG 373 (627)
T COG3158 294 LVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYG 373 (627)
T ss_pred HHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHH
Q 003883 444 TAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRY 523 (789)
Q Consensus 444 iAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGW~pl~la~v~~~iM~~W~~G~~~~~ 523 (789)
+|||++|++||+|++.+++..|||+.+.+.++.++|+.+|..||+||+.|++||||+|+++|++++++|+||++|+++.+
T Consensus 374 iAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~ 453 (627)
T COG3158 374 IAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILF 453 (627)
T ss_pred hheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEE
Q 003883 524 EFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKR 603 (789)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~gvP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~ 603 (789)
++..++++|++.+++.+++.++.|||||++|+|+..+.+|.+++|++|||+++||++||+++++.++|+|+++||+.+++
T Consensus 454 ~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~ 533 (627)
T COG3158 454 EKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQ 533 (627)
T ss_pred HHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCc
Q 003883 604 IGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQ 683 (789)
Q Consensus 604 ~~~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (789)
+++ +++|+.++|||||+||+|+.+..- +.
T Consensus 534 l~~---~f~rV~l~~Gfme~pnvp~~l~~~---------~~--------------------------------------- 562 (627)
T COG3158 534 LSD---DFVRVVLHFGFMETPNVPRALRLC---------RK--------------------------------------- 562 (627)
T ss_pred ccC---ceEEEEEEeeccCCCCHHHHHHHH---------hh---------------------------------------
Confidence 998 699999999999999998765431 10
Q ss_pred cccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHH
Q 003883 684 DLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLR 763 (789)
Q Consensus 684 ~~~~~~~~~~~~~~~~vrf~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkAk~~Ss~lKK~vIn~~Y~FLR 763 (789)
++.+|+ .+ ...|.+|++.+++++.|++.+ +-- -.|.+|.
T Consensus 563 --------------~G~~f~--im-----------------------~tsFfl~re~l~~~~~~g~~~-w~~-~lfi~l~ 601 (627)
T COG3158 563 --------------KGLKFD--IM-----------------------ETSFFLSRESLIASKNSGMPR-WRD-RLFIALA 601 (627)
T ss_pred --------------cCceec--cc-----------------------ceEEEEEeeeeecCCCCCchH-HHH-HHHHHHH
Confidence 011121 10 357999999999999999876 333 4789999
Q ss_pred hhccCCCcccccCCCCeEeeeeEEEC
Q 003883 764 KICRENSVIFNVPHESLLNVGQIFYV 789 (789)
Q Consensus 764 kNcR~~~~~L~IPh~~LlEVGMvY~V 789 (789)
||.-++...++||.+|++|+|-.-|+
T Consensus 602 r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 602 RNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred HhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 99999999999999999999965543
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=89.97 E-value=0.6 Score=53.83 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=43.3
Q ss_pred EehhHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceee-e
Q 003883 217 VVLVAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWT-S 292 (789)
Q Consensus 217 Vv~is~~ILv~LF~iQ~~GT~kvg~---~F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~~-~ 292 (789)
...+++++++++..+.-+|....++ .+.-+.++=++.+.+.|++.+.+.+++ ..+|...+.-. .++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHH
Confidence 3457788888899999999766554 333332222233344555544321111 11222111000 01222333 4
Q ss_pred ecceeeeeccccccc
Q 003883 293 LGGIMLSITGTEALF 307 (789)
Q Consensus 293 LG~v~L~iTGaEAly 307 (789)
+..++.+.+|-|+.=
T Consensus 241 ~~~~~~af~G~e~~~ 255 (501)
T TIGR00911 241 FYSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHHhHHHHh
Confidence 566677888887643
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=82.21 E-value=7.8 Score=43.35 Aligned_cols=177 Identities=18% Similarity=0.175 Sum_probs=101.0
Q ss_pred eEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcC--cceeeee
Q 003883 216 VVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGG--RDGWTSL 293 (789)
Q Consensus 216 ~Vv~is~~ILv~LF~iQ~~GT~kvg~~F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~g--~~g~~~L 293 (789)
....++.++++.++.++-+|....++...-..++=++.+..+.+..+...+......+++... ..+ ..-...+
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 207 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP-----GGGSFGGILAAI 207 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc-----ccchHHHHHHHH
Confidence 467789999999999999999988886665555555555555555444433222222221110 000 0123345
Q ss_pred cceeeeecccccc--ccC-CCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCc-ccc-----ccccc---ccc-Ccc
Q 003883 294 GGIMLSITGTEAL--FAD-LAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQD-HVV-----DAFYR---SIP-DSI 360 (789)
Q Consensus 294 G~v~L~iTGaEAl--yAD-lGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~-~~~-----npFy~---~~P-~~~ 360 (789)
+.++.+.+|-|+. +|+ +=+ .+|.|-.|-..-..-+.++-.+++-+....-|. +.. +|+.. ... .+.
T Consensus 208 ~~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~ 286 (466)
T COG0531 208 LLAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWG 286 (466)
T ss_pred HHHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHH
Confidence 5667888898864 332 333 555666665554433444433444333333332 111 34432 222 355
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCc
Q 003883 361 YWPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 398 (789)
Q Consensus 361 ~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 398 (789)
.+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 287 ~~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 287 AIIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 66666666666666667777777777777888999998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=77.18 E-value=22 Score=39.87 Aligned_cols=169 Identities=18% Similarity=0.164 Sum_probs=80.3
Q ss_pred EehhHHHHHHHHHhhhcccccccc---cchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCccee-ee
Q 003883 217 VVLVAVVILVGLFSLQHYGTDRVG---WLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGW-TS 292 (789)
Q Consensus 217 Vv~is~~ILv~LF~iQ~~GT~kvg---~~F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f~~~~g~~g~-~~ 292 (789)
+..++++++++...+..+|....+ ..+..+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..
T Consensus 133 ~~~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~ 200 (429)
T TIGR00909 133 FNLPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAA 200 (429)
T ss_pred ccHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHH
Confidence 334567778888888998976555 4666665554444444555432 22222222221 11121 11
Q ss_pred ecceeeeecccccccc--CCCCCCCcceehhhhHHHHHHHHhhhccchhhhccc-C-c---ccccccc----ccccCcch
Q 003883 293 LGGIMLSITGTEALFA--DLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNH-Q-D---HVVDAFY----RSIPDSIY 361 (789)
Q Consensus 293 LG~v~L~iTGaEAlyA--DlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~-p-~---~~~npFy----~~~P~~~~ 361 (789)
+...+.+.+|=|+.-. +-=+-.+|.+..|-..-+.-+ .+.|+.-....... | + ..++|+. +...++.-
T Consensus 201 ~~~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~-~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (429)
T TIGR00909 201 TALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVV-TLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGG 279 (429)
T ss_pred HHHHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHH-HHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHH
Confidence 2334566677776543 333445566776654322221 22244332222111 1 1 1123432 22233443
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCc
Q 003883 362 WPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 398 (789)
Q Consensus 362 ~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 398 (789)
+-+.+.+.++..-+..+.+.+.=-++...-+.|.+|+
T Consensus 280 ~~~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~ 316 (429)
T TIGR00909 280 LILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPG 316 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 4444444444444444444444445555557899997
No 12
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=75.15 E-value=31 Score=39.64 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=13.6
Q ss_pred CcHHHHHHHHHHHhhhhhh
Q 003883 498 GWVPLVIAAAFLVIMYVWH 516 (789)
Q Consensus 498 GW~pl~la~v~~~iM~~W~ 516 (789)
-|.+++++++++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888776666555
No 13
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=74.41 E-value=19 Score=41.28 Aligned_cols=25 Identities=8% Similarity=-0.057 Sum_probs=18.1
Q ss_pred ehhHHHHHHHHHhhhcccccccccc
Q 003883 218 VLVAVVILVGLFSLQHYGTDRVGWL 242 (789)
Q Consensus 218 v~is~~ILv~LF~iQ~~GT~kvg~~ 242 (789)
..+.+++++++..+.-+|....++.
T Consensus 144 ~~i~~~~~~~~~~in~~g~k~~~~~ 168 (482)
T TIGR00907 144 FGIMIGIHLIHALINSLPTKWLPRI 168 (482)
T ss_pred hhhHHHHHHHHHHHHHhhHhHHHHH
Confidence 5567777888888898987655443
No 14
>PRK15049 L-asparagine permease; Provisional
Probab=66.46 E-value=28 Score=40.57 Aligned_cols=22 Identities=14% Similarity=0.071 Sum_probs=16.3
Q ss_pred hHHHHHHHHHhhhccccccccc
Q 003883 220 VAVVILVGLFSLQHYGTDRVGW 241 (789)
Q Consensus 220 is~~ILv~LF~iQ~~GT~kvg~ 241 (789)
++.++++++..+.-+|....+.
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777888888888766654
No 15
>TIGR00930 2a30 K-Cl cotransporter.
Probab=66.20 E-value=43 Score=42.64 Aligned_cols=25 Identities=16% Similarity=0.231 Sum_probs=18.6
Q ss_pred EehhHHHHHHHHHhhhccccccccc
Q 003883 217 VVLVAVVILVGLFSLQHYGTDRVGW 241 (789)
Q Consensus 217 Vv~is~~ILv~LF~iQ~~GT~kvg~ 241 (789)
+-.++++++++++++--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4457778888888888899865544
No 16
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=66.14 E-value=80 Score=37.60 Aligned_cols=45 Identities=24% Similarity=0.454 Sum_probs=27.0
Q ss_pred EehhHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHhhhhh
Q 003883 217 VVLVAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLN 261 (789)
Q Consensus 217 Vv~is~~ILv~LF~iQ~~GT~kvg~---~F~PIm~~Wf~~i~~iGiyn 261 (789)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3456777777777888899766654 34444344444445555543
No 17
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=65.59 E-value=19 Score=40.26 Aligned_cols=222 Identities=15% Similarity=0.133 Sum_probs=120.5
Q ss_pred EehhHHHHHHHHHhhhcccccccccc---hhhHHH-HHHHHHHHhhhhhccccCcce-----eeecChHHHHHHHHhcCc
Q 003883 217 VVLVAVVILVGLFSLQHYGTDRVGWL---FAPIVL-LWFLLIGGIGMLNIWKYDSSV-----LKAFSPVYIYRYFRRGGR 287 (789)
Q Consensus 217 Vv~is~~ILv~LF~iQ~~GT~kvg~~---F~PIm~-~Wf~~i~~iGiynI~~~~P~V-----l~AlnP~ya~~f~~~~g~ 287 (789)
...++.++++..+.+.-+|....+++ ++=+.+ +-++.+.+.|++...+. ..- ....+|. +.
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~ 187 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSFS-GFNSLSFSLSTFFPS---------GW 187 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCC-HHH----SHSCSSCS---------SS
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeeccc-ccccccccccccCCc---------cc
Confidence 35678888888999999998766654 333333 35555666677655431 110 1111211 11
Q ss_pred c-eeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCcc----ccc------ccccc-
Q 003883 288 D-GWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDH----VVD------AFYRS- 355 (789)
Q Consensus 288 ~-g~~~LG~v~L~iTGaEAlyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~----~~n------pFy~~- 355 (789)
. -+..+...+.+.+|-|+.=.-.+-.-+|.+..|=..-+.-+.++.-+..-++...-|.+ .+| .+++.
T Consensus 188 ~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (426)
T PF13520_consen 188 PGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAV 267 (426)
T ss_dssp SHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHH
T ss_pred cchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccc
Confidence 1 13445667888889887544444454566666544333333333333333333332221 112 22332
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhh-heE--Eee
Q 003883 356 IPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCI-AVT--AGF 432 (789)
Q Consensus 356 ~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~kIvhTS~~~~GQIYIP~vNw~Lmi~~l-~vv--~~F 432 (789)
-.++..+.+.+.+.++..-+-.+.+.+.--++.+.-+-|.+|+ +..|++| +| .|..-.++...+. ++. ..|
T Consensus 268 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~ 341 (426)
T PF13520_consen 268 GGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLFLF 341 (426)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHHHh
Confidence 2467788888888888887777777777777778888899994 2233332 22 2554444433332 222 223
Q ss_pred ---cCchhhhhhhhchhhHHHHHHH
Q 003883 433 ---KNQSQIGNAYGTAVVIVMLATT 454 (789)
Q Consensus 433 ---~~s~~l~~AYGiAV~~~M~iTT 454 (789)
++-+.+.+.+.+......+++.
T Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 342 IPQSSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp SSSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2335667766666666666653
No 18
>PRK10655 potE putrescine transporter; Provisional
Probab=65.51 E-value=63 Score=36.58 Aligned_cols=43 Identities=16% Similarity=0.026 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHhhhcccccccccc---hhhHHHHHHHHHHHhhhhh
Q 003883 219 LVAVVILVGLFSLQHYGTDRVGWL---FAPIVLLWFLLIGGIGMLN 261 (789)
Q Consensus 219 ~is~~ILv~LF~iQ~~GT~kvg~~---F~PIm~~Wf~~i~~iGiyn 261 (789)
.+++++++.+..+.-+|+...+++ ..-..++-++.+.+.|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677888999997666653 2333334344444555443
No 19
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=64.18 E-value=55 Score=37.23 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=17.2
Q ss_pred hHHHHHHHHHhhhcccccccccc
Q 003883 220 VAVVILVGLFSLQHYGTDRVGWL 242 (789)
Q Consensus 220 is~~ILv~LF~iQ~~GT~kvg~~ 242 (789)
++++++..+..+.-+|+...+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 35566667888999998877664
No 20
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=55.24 E-value=95 Score=33.81 Aligned_cols=53 Identities=15% Similarity=0.079 Sum_probs=38.4
Q ss_pred hhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHHHHHHhh
Q 003883 438 IGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLV----VECTYFSAV 490 (789)
Q Consensus 438 l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~----ie~~f~sa~ 490 (789)
-=..||.+|..+.++.++-++..+..+.+.+++.++++.++++. +|-..+|+.
T Consensus 14 k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~ 70 (301)
T PF14362_consen 14 KYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSI 70 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34578888989999888888888888888876666666655554 555555543
No 21
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=52.10 E-value=21 Score=39.71 Aligned_cols=40 Identities=35% Similarity=0.751 Sum_probs=30.8
Q ss_pred HHhcCcceeeeecceeeeeccccc-----------------cccCCCCCCCcceehhh
Q 003883 282 FRRGGRDGWTSLGGIMLSITGTEA-----------------LFADLAHFPVSAIQIAF 322 (789)
Q Consensus 282 ~~~~g~~g~~~LG~v~L~iTGaEA-----------------lyADlGHFg~~~Ir~aw 322 (789)
+.|....|| +.|+|+|=+|||-| .|+|+|-||-.-+.+-|
T Consensus 287 ~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi~F 343 (372)
T KOG3145|consen 287 FTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSIFF 343 (372)
T ss_pred ceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHHHH
Confidence 456667898 66999999999965 68999999976544433
No 22
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=50.95 E-value=62 Score=33.54 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=16.8
Q ss_pred CCcHHHHHHHHHHHhhhhhhH
Q 003883 497 GGWVPLVIAAAFLVIMYVWHY 517 (789)
Q Consensus 497 GGW~pl~la~v~~~iM~~W~~ 517 (789)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999888766653
No 23
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=48.28 E-value=1e+02 Score=34.96 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=17.5
Q ss_pred hhHHHHHHHHHhhhcccccccccc
Q 003883 219 LVAVVILVGLFSLQHYGTDRVGWL 242 (789)
Q Consensus 219 ~is~~ILv~LF~iQ~~GT~kvg~~ 242 (789)
.+++++++.+..+.-+|.+..+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 456666777788888898777664
No 24
>PRK10249 phenylalanine transporter; Provisional
Probab=46.76 E-value=1e+02 Score=35.43 Aligned_cols=102 Identities=25% Similarity=0.270 Sum_probs=50.8
Q ss_pred hHHHHHHHHHhhhcccccccccc---hhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHH--HHhcCcce-eeee
Q 003883 220 VAVVILVGLFSLQHYGTDRVGWL---FAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRY--FRRGGRDG-WTSL 293 (789)
Q Consensus 220 is~~ILv~LF~iQ~~GT~kvg~~---F~PIm~~Wf~~i~~iGiynI~~~~P~Vl~AlnP~ya~~f--~~~~g~~g-~~~L 293 (789)
++.++++++.++.-+|....+++ +.=+-++..+.+.++|++-+...++.- ..++.+.... +..+|..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 45666777778888888766642 333334444555555555433211110 1111111000 00123233 2345
Q ss_pred cceeeeecccccc--ccCCCCCCCcceehhhh
Q 003883 294 GGIMLSITGTEAL--FADLAHFPVSAIQIAFT 323 (789)
Q Consensus 294 G~v~L~iTGaEAl--yADlGHFg~~~Ir~aw~ 323 (789)
..++.+.+|-|.. .|+=-+-.+|.|-.|-.
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 5566778888865 55555566666665544
No 25
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=44.26 E-value=2.3e+02 Score=32.31 Aligned_cols=45 Identities=13% Similarity=0.290 Sum_probs=26.3
Q ss_pred ehhHHHHHHHHHhhhccccc---ccccchhhHHHHHHHHHHHhhhhhc
Q 003883 218 VLVAVVILVGLFSLQHYGTD---RVGWLFAPIVLLWFLLIGGIGMLNI 262 (789)
Q Consensus 218 v~is~~ILv~LF~iQ~~GT~---kvg~~F~PIm~~Wf~~i~~iGiynI 262 (789)
..+++++++.+..+.-+|.. |+...+.=+.++=++.+.++|++.+
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34566677777788989875 4444444334444445555666543
No 26
>PRK11021 putative transporter; Provisional
Probab=39.82 E-value=4.8e+02 Score=29.33 Aligned_cols=27 Identities=22% Similarity=0.270 Sum_probs=21.1
Q ss_pred EehhHHHHHHHHHhhhcccccccccch
Q 003883 217 VVLVAVVILVGLFSLQHYGTDRVGWLF 243 (789)
Q Consensus 217 Vv~is~~ILv~LF~iQ~~GT~kvg~~F 243 (789)
...+++++++.+..+.-+|....+++-
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~ 141 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQ 141 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 356778888888999999988877643
No 27
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=38.81 E-value=1.2e+02 Score=35.07 Aligned_cols=43 Identities=9% Similarity=-0.060 Sum_probs=25.2
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCc
Q 003883 356 IPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 398 (789)
Q Consensus 356 ~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 398 (789)
..++...-+.+.+.+++.-+..+.+.+.--+..+.-+-|.+|+
T Consensus 278 ~g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~ 320 (473)
T TIGR00905 278 VGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPK 320 (473)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 3444433333334444444555566666666677778899997
No 28
>PRK10746 putative transport protein YifK; Provisional
Probab=38.24 E-value=1.8e+02 Score=33.61 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=22.2
Q ss_pred ccccHHHHHHHHHhhcceeecccccchhhhhhcccCC
Q 003883 43 KKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH 79 (789)
Q Consensus 43 ~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~ 79 (789)
++.+.+....+++++. |||.-+..-+.....
T Consensus 10 r~L~~~~~~~i~ig~~------IGtGlf~~~g~~l~~ 40 (461)
T PRK10746 10 RGLEARHIELIALGGT------IGVGLFMGAASTLKW 40 (461)
T ss_pred ccCcHHHHHHHHHHhh------hhhhHHHHhHHHHHh
Confidence 4567777777777665 898888777776644
No 29
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=36.10 E-value=1.1e+02 Score=34.84 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=16.3
Q ss_pred hhHHHHHHHHHhhhccccccccc
Q 003883 219 LVAVVILVGLFSLQHYGTDRVGW 241 (789)
Q Consensus 219 ~is~~ILv~LF~iQ~~GT~kvg~ 241 (789)
.+.+++++.+..+.-+|+...++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~ 149 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITR 149 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHH
Confidence 34566666778888889876665
No 30
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=35.80 E-value=33 Score=36.69 Aligned_cols=30 Identities=23% Similarity=0.622 Sum_probs=25.4
Q ss_pred ccCCCcHHHHHHHHHHHhhhhhhHhHHHHH
Q 003883 494 VDQGGWVPLVIAAAFLVIMYVWHYGTVKRY 523 (789)
Q Consensus 494 ~~~GGW~pl~la~v~~~iM~~W~~G~~~~~ 523 (789)
=.+|||..++.++++..+..+|++--+.+-
T Consensus 258 ~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 258 SIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred ccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 348999999999999999999998655553
No 31
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=35.64 E-value=4.4e+02 Score=30.37 Aligned_cols=45 Identities=9% Similarity=-0.205 Sum_probs=30.2
Q ss_pred cccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCce
Q 003883 355 SIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 399 (789)
Q Consensus 355 ~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ 399 (789)
...++..+.+.+.+.++.+-+..+.+.++--+..+.-+-|.+|+.
T Consensus 273 ~~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 273 MVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred HcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 334555555555566666666666677777777777789999964
No 32
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=35.49 E-value=6e+02 Score=28.99 Aligned_cols=25 Identities=16% Similarity=0.220 Sum_probs=17.8
Q ss_pred hhHHHHHHHHHhhhcccccccccch
Q 003883 219 LVAVVILVGLFSLQHYGTDRVGWLF 243 (789)
Q Consensus 219 ~is~~ILv~LF~iQ~~GT~kvg~~F 243 (789)
.+++++++.+..+.-+|+...+.+-
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~ 152 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFE 152 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHH
Confidence 3566666677778888987777644
No 33
>PRK10238 aromatic amino acid transporter; Provisional
Probab=34.48 E-value=1.9e+02 Score=33.31 Aligned_cols=113 Identities=22% Similarity=0.195 Sum_probs=51.6
Q ss_pred hHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHhhhhhccc--cCcc-eeeecChHHHHHHHHhcCccee-ee
Q 003883 220 VAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWK--YDSS-VLKAFSPVYIYRYFRRGGRDGW-TS 292 (789)
Q Consensus 220 is~~ILv~LF~iQ~~GT~kvg~---~F~PIm~~Wf~~i~~iGiynI~~--~~P~-Vl~AlnP~ya~~f~~~~g~~g~-~~ 292 (789)
.+++++++++.+.-+|+...+. .+.-+-++-++.+-++|+.-+.. .+|. .+.-+.+. .-+..++..|+ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566778888888776654 23333333333333334433221 1121 11110000 00001121122 22
Q ss_pred ecceeeeeccccc--cccCCCCCCCcceehhhhHHHHHHHHhhhcc
Q 003883 293 LGGIMLSITGTEA--LFADLAHFPVSAIQIAFTVVVFPCLLLAYSG 336 (789)
Q Consensus 293 LG~v~L~iTGaEA--lyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~G 336 (789)
++.++.+.+|-|+ ..|.=-+-.+|.+-.|-.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 4456677888887 3444445666777777542 23444455654
No 34
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=33.37 E-value=9.9 Score=38.98 Aligned_cols=68 Identities=25% Similarity=0.415 Sum_probs=50.6
Q ss_pred hHHHHHH-HHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHH---HHhhccCCCcccccCCCCeEeeee
Q 003883 717 ETDELEF-LNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAF---LRKICRENSVIFNVPHESLLNVGQ 785 (789)
Q Consensus 717 v~eEl~~-L~~A~eaGVvYIlG~~~vkAk~~Ss~lKK~vIn~~Y~F---LRkNcR~~~~~L~IPh~~LlEVGM 785 (789)
..+|+.+ +++++++|+--++-.. .+.++=.++..|+-+||+|.- .+++.|.....+++|.++.+-||-
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSN-n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSN-NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeC-CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 3445544 6667888875544332 566666788899999988765 367888899999999999999984
No 35
>PRK11387 S-methylmethionine transporter; Provisional
Probab=32.77 E-value=2.8e+02 Score=32.02 Aligned_cols=30 Identities=10% Similarity=0.201 Sum_probs=18.4
Q ss_pred ccccHHHHHHHHHhhcceeecccccchhhhhhcccC
Q 003883 43 KKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFP 78 (789)
Q Consensus 43 ~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~ 78 (789)
++.+.+....++.++. |||..+........
T Consensus 14 r~L~~~~~~~l~ig~~------IG~Gif~~~g~~~~ 43 (471)
T PRK11387 14 RTMKVRHLVMLSLGGV------IGTGLFFNTGYIIS 43 (471)
T ss_pred hcCcHHHHHHHHHHhh------hhhHHHHHHHHHHH
Confidence 4566666655555433 88886666665554
No 36
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=31.29 E-value=3.5e+02 Score=31.85 Aligned_cols=46 Identities=15% Similarity=0.185 Sum_probs=23.9
Q ss_pred ceeeeecccccc--ccCCCCCCCcceehhhhHHHHHHHHhhhccchhh
Q 003883 295 GIMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAY 340 (789)
Q Consensus 295 ~v~L~iTGaEAl--yADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ 340 (789)
+++.+.+|-|+. .|+==+--+|.+-.|-...+.-+.++.++|--++
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888865 4444455566665555443333444444443333
No 37
>PRK10580 proY putative proline-specific permease; Provisional
Probab=30.88 E-value=2.4e+02 Score=32.38 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=18.2
Q ss_pred CCCcHHHHHHHHHHHhhhhhhHhH
Q 003883 496 QGGWVPLVIAAAFLVIMYVWHYGT 519 (789)
Q Consensus 496 ~GGW~pl~la~v~~~iM~~W~~G~ 519 (789)
.+.++.+.++.+.+.+.+.++.-.
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~ 446 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFK 446 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888888888887653
No 38
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=29.82 E-value=42 Score=39.13 Aligned_cols=90 Identities=20% Similarity=0.258 Sum_probs=57.5
Q ss_pred HcCCCCceeEEecCCcccC----ceeehhhHHHHHHHhhheEEeecCchhhhhhhhchhhHHHHHHHHHHHHHHH-----
Q 003883 392 ALGCFPRVKVVHTSKKFLG----QIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMI----- 462 (789)
Q Consensus 392 ~Lg~fPr~kIvhTS~~~~G----QIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~----- 462 (789)
+.|-.||+-+...=++..| |+|+|.+= +-.+-=|-.-=|-++-.+=-.+++|++..+||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3788999999998888888 99999751 1111111122355556666889999999999998865221
Q ss_pred HHHhhhhHHHHHHHHHHHH-HHHH
Q 003883 463 LVWRCHWILVLIFTALSLV-VECT 485 (789)
Q Consensus 463 ~vw~~~~~~~~~~~~~F~~-ie~~ 485 (789)
++.-.-+.+..+|+.+|++ +|-+
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHH
Confidence 1222334555666666665 4443
No 39
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=26.09 E-value=6.2e+02 Score=29.20 Aligned_cols=104 Identities=13% Similarity=0.090 Sum_probs=47.5
Q ss_pred cceeeeecccccc--ccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhc--ccCcc---ccccccccc----cCcchH
Q 003883 294 GGIMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLM--NHQDH---VVDAFYRSI----PDSIYW 362 (789)
Q Consensus 294 G~v~L~iTGaEAl--yADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll--~~p~~---~~npFy~~~----P~~~~~ 362 (789)
..++.+.+|-|+. .|.==+-.+|.|..|-. .+.-...+.|+-....+. ..+++ .++||-... -++...
T Consensus 218 ~~~~~af~G~e~~~~~a~E~knP~r~iPrai~-~~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 296 (469)
T PRK11049 218 QIAVFAFVGIELVGTTAAETKDPEKSLPRAIN-SIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAAS 296 (469)
T ss_pred HHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHH-HHHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHHH
Confidence 3355667787764 33333455666666653 222233344443333222 12222 235553211 122222
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCc
Q 003883 363 PVFIVATAAAIVASQATISATFSIIKQALALGCFPR 398 (789)
Q Consensus 363 P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 398 (789)
-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+
T Consensus 297 ~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 297 VINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 233333333444444444455555555567899996
No 40
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=24.46 E-value=3.8e+02 Score=30.01 Aligned_cols=165 Identities=18% Similarity=0.212 Sum_probs=95.3
Q ss_pred eccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHHHHHHHhhhhh
Q 003883 300 ITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQAT 379 (789)
Q Consensus 300 iTGaEAlyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ 379 (789)
.||.=||-||=+|+---.+-+.-..+ |-.+.+.|.+..-+| ++- =+-+||+.+..=.+
T Consensus 44 ~s~SlaLLADa~Hml~D~~al~lal~------------A~~~a~r~~~~~~Tf-----Gy~-----R~eiLaa~~nav~L 101 (296)
T COG1230 44 LTGSLALLADALHMLSDALALLLALI------------AIKLARRPATKRFTF-----GYK-----RLEILAAFLNALLL 101 (296)
T ss_pred HhccHHHHHhHHHHHHHHHHHHHHHH------------HHHHhcCCCCCCCCc-----cHh-----HHHHHHHHHHHHHH
Confidence 58999999999998766543222211 124566666655555 111 13567888888889
Q ss_pred hhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheEEee-------c--C-chhhhhhhhchhhHH
Q 003883 380 ISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGF-------K--N-QSQIGNAYGTAVVIV 449 (789)
Q Consensus 380 ISg~FSii~Qai~Lg~fPr~kIvhTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F-------~--~-s~~l~~AYGiAV~~~ 449 (789)
|..++.+..+|++-=.=|. .|+. +++|.++.+++++-+ + + +.|+-+|| +-|.++
T Consensus 102 i~~s~~I~~EAi~R~~~P~--------------~i~~-~~ml~va~~GL~vN~~~a~ll~~~~~~~lN~r~a~-LHvl~D 165 (296)
T COG1230 102 IVVSLLILWEAIQRLLAPP--------------PIHY-SGMLVVAIIGLVVNLVSALLLHKGHEENLNMRGAY-LHVLGD 165 (296)
T ss_pred HHHHHHHHHHHHHHhcCCC--------------CCCc-cchHHHHHHHHHHHHHHHHHhhCCCcccchHHHHH-HHHHHH
Confidence 9999999999986322232 3444 667777766654322 1 2 57778888 555555
Q ss_pred HHHHHHH-HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 003883 450 MLATTLL-MTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMH 528 (789)
Q Consensus 450 M~iTT~L-~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~ 528 (789)
++-+--- +.-+....|+|+ |+=.+++.++..+.+-|-++--+.-.....
T Consensus 166 ~Lgsv~vIia~i~i~~~~w~------------------------------~~Dpi~si~i~~lil~~a~~l~k~s~~iLl 215 (296)
T COG1230 166 ALGSVGVIIAAIVIRFTGWS------------------------------WLDPILSIVIALLILSSAWPLLKESLNILL 215 (296)
T ss_pred HHHHHHHHHHHHHHHHhCCC------------------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5432211 111112234444 444455666666666666665555544444
Q ss_pred cCCC
Q 003883 529 SKVS 532 (789)
Q Consensus 529 ~~~~ 532 (789)
+..|
T Consensus 216 e~~P 219 (296)
T COG1230 216 EGVP 219 (296)
T ss_pred hcCC
Confidence 4443
No 41
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=23.12 E-value=1.2e+03 Score=26.91 Aligned_cols=25 Identities=24% Similarity=0.310 Sum_probs=17.9
Q ss_pred EehhHHHHHHHHHhhhccccccccc
Q 003883 217 VVLVAVVILVGLFSLQHYGTDRVGW 241 (789)
Q Consensus 217 Vv~is~~ILv~LF~iQ~~GT~kvg~ 241 (789)
...++.++++++.++.-+|+...++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3456667777788888899876655
No 42
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=21.44 E-value=1.1e+02 Score=28.94 Aligned_cols=30 Identities=13% Similarity=0.317 Sum_probs=23.2
Q ss_pred CceEEEEEecCCCCCEEEEEEEeecccCCC
Q 003883 596 EERFLVKRIGPKNFHMFRCVARYGYKDLHK 625 (789)
Q Consensus 596 ~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~ 625 (789)
+--+.+..+...+.|.|+|.+.+|.-|..+
T Consensus 73 ~asL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 73 DATLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred CcEEEEeecccccCEEEEEEEecCCCCcee
Confidence 344566677777889999999999887654
No 43
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=21.20 E-value=81 Score=25.52 Aligned_cols=29 Identities=17% Similarity=0.511 Sum_probs=15.2
Q ss_pred HHHHHhhhhhhHhHHHHHHHHHhcCCChH
Q 003883 506 AAFLVIMYVWHYGTVKRYEFEMHSKVSMA 534 (789)
Q Consensus 506 ~v~~~iM~~W~~G~~~~~~~~~~~~~~~~ 534 (789)
.+++.....|.|-++++.++|...++|++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 33344445555555545555555566654
No 44
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=20.68 E-value=3e+02 Score=29.13 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=31.5
Q ss_pred HHHHHHHhhheEEeecCchhhhhhh--hchhhHHHHHHHHHHHHHHHHH
Q 003883 418 NWILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMILV 464 (789)
Q Consensus 418 Nw~Lmi~~l~vv~~F~~s~~l~~AY--GiAV~~~M~iTT~L~~lv~~~v 464 (789)
|-..+.-.+.+.-...-|+++.||- |+||+.||.+++.+..++-..+
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444455555556677777766 6778889999988888776654
Done!