Query 003886
Match_columns 789
No_of_seqs 554 out of 5043
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 07:15:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 3.9E-54 1.3E-58 513.2 42.8 571 102-787 67-687 (740)
2 3azo_A Aminopeptidase; POP fam 100.0 8.6E-49 2.9E-53 461.9 50.7 549 108-788 33-611 (662)
3 2xdw_A Prolyl endopeptidase; a 100.0 2.1E-47 7E-52 453.2 57.7 556 105-787 80-658 (710)
4 3o4h_A Acylamino-acid-releasin 100.0 3.9E-49 1.3E-53 457.5 40.9 521 78-787 8-541 (582)
5 1xfd_A DIP, dipeptidyl aminope 100.0 1.1E-49 3.6E-54 474.5 35.6 576 101-786 65-682 (723)
6 2ecf_A Dipeptidyl peptidase IV 100.0 2E-47 6.8E-52 456.2 47.9 559 101-787 113-702 (741)
7 2bkl_A Prolyl endopeptidase; m 100.0 7.5E-47 2.6E-51 447.1 51.4 551 102-787 73-633 (695)
8 1z68_A Fibroblast activation p 100.0 2.4E-47 8.1E-52 454.0 42.9 565 101-787 64-681 (719)
9 1yr2_A Prolyl oligopeptidase; 100.0 4.3E-46 1.5E-50 443.7 53.0 549 101-787 111-675 (741)
10 2z3z_A Dipeptidyl aminopeptida 100.0 2.4E-46 8.2E-51 444.4 46.6 553 101-786 86-668 (706)
11 3iuj_A Prolyl endopeptidase; h 100.0 1.5E-45 5E-50 435.1 51.6 500 156-787 131-642 (693)
12 2xe4_A Oligopeptidase B; hydro 100.0 8.5E-45 2.9E-49 431.0 55.0 559 83-787 104-699 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 1.3E-35 4.6E-40 343.7 41.6 307 447-787 353-667 (711)
14 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.5E-22 8.7E-27 221.7 32.7 267 106-498 141-408 (415)
15 3pe7_A Oligogalacturonate lyas 99.9 4.5E-23 1.5E-27 225.3 25.7 321 102-522 41-384 (388)
16 2gop_A Trilobed protease; beta 99.9 2.4E-21 8.2E-26 208.2 25.8 317 88-519 10-330 (347)
17 4a5s_A Dipeptidyl peptidase 4 99.9 2.5E-20 8.5E-25 221.7 27.7 313 101-523 21-401 (740)
18 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.4E-20 2.9E-24 201.5 28.8 244 163-522 141-387 (415)
19 3c5m_A Oligogalacturonate lyas 99.9 8.2E-21 2.8E-25 207.6 19.6 311 101-523 40-385 (396)
20 2ecf_A Dipeptidyl peptidase IV 99.9 8.9E-20 3.1E-24 217.1 29.7 312 97-520 37-413 (741)
21 4ao6_A Esterase; hydrolase, th 99.8 1.2E-20 4E-25 194.1 17.8 175 570-787 37-226 (259)
22 3pe7_A Oligogalacturonate lyas 99.8 3.5E-20 1.2E-24 202.3 20.4 291 128-523 12-330 (388)
23 1xfd_A DIP, dipeptidyl aminope 99.8 1.4E-19 4.6E-24 214.9 24.8 314 99-521 19-394 (723)
24 2jbw_A Dhpon-hydrolase, 2,6-di 99.8 2E-19 6.9E-24 196.5 20.5 191 572-785 135-328 (386)
25 2ojh_A Uncharacterized protein 99.8 2.2E-18 7.6E-23 179.3 27.6 263 124-510 19-294 (297)
26 1vlq_A Acetyl xylan esterase; 99.8 1.6E-19 5.4E-24 193.4 17.8 210 567-787 72-303 (337)
27 1z68_A Fibroblast activation p 99.8 4E-19 1.4E-23 210.7 22.5 311 101-521 20-392 (719)
28 3pfb_A Cinnamoyl esterase; alp 99.8 5.4E-19 1.8E-23 182.3 18.6 206 571-787 29-235 (270)
29 2wtm_A EST1E; hydrolase; 1.60A 99.8 2.7E-19 9.2E-24 182.9 15.1 207 572-787 9-217 (251)
30 3hxk_A Sugar hydrolase; alpha- 99.8 3.9E-19 1.3E-23 184.4 15.7 193 568-787 19-216 (276)
31 3fcy_A Xylan esterase 1; alpha 99.8 1.1E-18 3.9E-23 187.5 19.2 212 567-787 86-315 (346)
32 1mpx_A Alpha-amino acid ester 99.8 3E-19 1E-23 205.9 14.6 216 567-787 29-301 (615)
33 1k32_A Tricorn protease; prote 99.8 1.4E-17 4.9E-22 205.5 29.9 328 97-509 53-493 (1045)
34 3doh_A Esterase; alpha-beta hy 99.8 7.6E-19 2.6E-23 191.4 16.3 177 567-787 148-336 (380)
35 1l7a_A Cephalosporin C deacety 99.8 1.9E-18 6.6E-23 182.6 19.0 210 567-787 60-286 (318)
36 3trd_A Alpha/beta hydrolase; c 99.8 6.9E-18 2.4E-22 166.9 21.2 166 567-787 10-178 (208)
37 3c5m_A Oligogalacturonate lyas 99.8 1.6E-18 5.3E-23 189.4 17.9 261 156-523 38-330 (396)
38 3f67_A Putative dienelactone h 99.8 9.4E-19 3.2E-23 177.2 14.8 179 568-786 11-196 (241)
39 3bxp_A Putative lipase/esteras 99.8 5.2E-18 1.8E-22 176.0 18.6 188 571-787 11-219 (277)
40 3bjr_A Putative carboxylestera 99.8 1.9E-18 6.4E-23 180.0 14.6 190 568-787 24-233 (283)
41 2b9v_A Alpha-amino acid ester 99.8 9.9E-19 3.4E-23 202.3 13.1 214 567-787 41-314 (652)
42 2i3d_A AGR_C_3351P, hypothetic 99.8 2.5E-17 8.6E-22 168.0 21.3 167 567-787 27-196 (249)
43 3hju_A Monoglyceride lipase; a 99.8 2.4E-17 8.2E-22 176.4 21.3 208 567-787 39-274 (342)
44 2ojh_A Uncharacterized protein 99.8 1E-16 3.5E-21 166.6 24.8 250 99-466 44-294 (297)
45 3pe6_A Monoglyceride lipase; a 99.8 4.7E-17 1.6E-21 169.9 22.0 208 567-786 21-255 (303)
46 2pbl_A Putative esterase/lipas 99.7 7.5E-18 2.6E-22 173.2 14.7 178 572-786 47-231 (262)
47 2hdw_A Hypothetical protein PA 99.7 5.9E-17 2E-21 175.3 21.9 210 567-785 72-330 (367)
48 1zi8_A Carboxymethylenebutenol 99.7 9.5E-18 3.2E-22 169.2 14.3 171 567-787 7-188 (236)
49 3o4h_A Acylamino-acid-releasin 99.7 1.5E-17 5.3E-22 192.0 18.0 234 155-510 23-267 (582)
50 3azo_A Aminopeptidase; POP fam 99.7 2.8E-17 9.5E-22 192.9 19.9 272 154-523 24-326 (662)
51 3llc_A Putative hydrolase; str 99.7 1.3E-16 4.3E-21 163.9 22.0 205 569-787 18-234 (270)
52 1k32_A Tricorn protease; prote 99.7 9.6E-17 3.3E-21 198.2 25.0 180 272-523 264-462 (1045)
53 2fuk_A XC6422 protein; A/B hyd 99.7 9E-17 3.1E-21 160.2 20.0 164 567-786 14-182 (220)
54 4e15_A Kynurenine formamidase; 99.7 5.1E-18 1.8E-22 178.7 11.1 182 576-786 68-263 (303)
55 4fbl_A LIPS lipolytic enzyme; 99.7 1.5E-17 5.1E-22 173.1 14.5 186 591-787 50-246 (281)
56 2z3z_A Dipeptidyl aminopeptida 99.7 5.1E-16 1.7E-20 183.6 28.6 263 155-523 83-392 (706)
57 1lns_A X-prolyl dipeptidyl ami 99.7 4.7E-17 1.6E-21 191.0 19.2 208 569-787 179-485 (763)
58 3ksr_A Putative serine hydrola 99.7 3.7E-18 1.3E-22 178.3 8.8 192 572-788 14-205 (290)
59 2o2g_A Dienelactone hydrolase; 99.7 3.1E-17 1.1E-21 163.6 15.2 163 572-785 20-185 (223)
60 3k2i_A Acyl-coenzyme A thioest 99.7 4.6E-17 1.6E-21 179.8 16.8 191 575-786 144-344 (422)
61 3fnb_A Acylaminoacyl peptidase 99.7 3.2E-17 1.1E-21 180.1 15.4 199 572-786 143-360 (405)
62 3mve_A FRSA, UPF0255 protein V 99.7 6.5E-17 2.2E-21 177.6 17.7 199 572-787 176-383 (415)
63 3iii_A COCE/NOND family hydrol 99.7 6.3E-17 2.2E-21 182.6 17.1 208 567-787 45-287 (560)
64 3bdi_A Uncharacterized protein 99.7 4.2E-16 1.5E-20 153.4 20.4 162 571-787 11-175 (207)
65 3hlk_A Acyl-coenzyme A thioest 99.7 8.6E-17 2.9E-21 178.7 16.0 194 575-786 160-360 (446)
66 3fcx_A FGH, esterase D, S-form 99.7 1.6E-17 5.4E-22 172.7 9.2 194 570-786 24-244 (282)
67 3h04_A Uncharacterized protein 99.7 6.2E-16 2.1E-20 158.9 20.2 199 567-787 7-237 (275)
68 3nuz_A Putative acetyl xylan e 99.7 3.9E-17 1.3E-21 178.6 10.9 141 567-710 96-268 (398)
69 3g8y_A SUSD/RAGB-associated es 99.7 7.3E-17 2.5E-21 176.1 12.9 207 567-786 91-330 (391)
70 1jfr_A Lipase; serine hydrolas 99.7 3.1E-16 1E-20 161.2 16.1 151 577-787 40-195 (262)
71 4f0j_A Probable hydrolytic enz 99.7 3.8E-15 1.3E-19 156.5 24.6 122 572-706 28-149 (315)
72 3ebl_A Gibberellin receptor GI 99.7 2E-16 6.9E-21 170.8 15.0 129 567-708 68-229 (365)
73 3vis_A Esterase; alpha/beta-hy 99.7 3.8E-16 1.3E-20 164.6 16.6 148 578-787 85-239 (306)
74 3i6y_A Esterase APC40077; lipa 99.7 8.1E-17 2.8E-21 167.3 11.1 197 570-786 25-242 (280)
75 3fak_A Esterase/lipase, ESTE5; 99.7 1.5E-16 5E-21 169.0 13.1 186 575-787 66-266 (322)
76 3ga7_A Acetyl esterase; phosph 99.7 4.3E-16 1.5E-20 165.8 16.6 189 567-787 67-280 (326)
77 1vkh_A Putative serine hydrola 99.7 1.2E-16 4E-21 165.5 11.6 179 589-787 38-240 (273)
78 3qit_A CURM TE, polyketide syn 99.7 9.4E-16 3.2E-20 158.3 18.4 121 571-707 11-131 (286)
79 3ls2_A S-formylglutathione hyd 99.7 1.6E-16 5.4E-21 165.1 12.0 197 570-786 23-242 (280)
80 1tht_A Thioesterase; 2.10A {Vi 99.7 7.5E-16 2.6E-20 162.0 16.8 205 568-786 12-227 (305)
81 3e4d_A Esterase D; S-formylglu 99.7 2.4E-16 8.2E-21 163.4 12.5 198 570-787 23-242 (278)
82 1k8q_A Triacylglycerol lipase, 99.7 8.7E-16 3E-20 166.3 17.5 134 567-707 31-184 (377)
83 2zsh_A Probable gibberellin re 99.7 9.7E-16 3.3E-20 164.9 17.6 125 573-708 80-230 (351)
84 1jkm_A Brefeldin A esterase; s 99.7 2.3E-16 7.8E-21 170.4 12.3 133 567-708 86-227 (361)
85 3vgz_A Uncharacterized protein 99.7 5E-14 1.7E-18 150.8 30.3 281 102-508 46-334 (353)
86 1l0q_A Surface layer protein; 99.7 2.2E-14 7.5E-19 156.3 27.9 243 155-523 33-276 (391)
87 3og9_A Protein YAHD A copper i 99.7 3.5E-16 1.2E-20 154.9 12.3 155 588-787 13-177 (209)
88 2hm7_A Carboxylesterase; alpha 99.7 2.5E-16 8.6E-21 166.3 11.7 129 567-709 52-189 (310)
89 3dkr_A Esterase D; alpha beta 99.7 2.7E-16 9.2E-21 159.4 11.0 181 590-787 20-212 (251)
90 2xdw_A Prolyl endopeptidase; a 99.6 4.4E-15 1.5E-19 175.6 22.9 266 162-521 80-367 (710)
91 3h2g_A Esterase; xanthomonas o 99.6 5E-16 1.7E-20 170.1 13.6 137 574-710 61-213 (397)
92 2qjw_A Uncharacterized protein 99.6 8.4E-16 2.9E-20 147.3 13.6 144 590-785 2-145 (176)
93 3i2k_A Cocaine esterase; alpha 99.6 8.9E-16 3.1E-20 175.7 15.8 207 567-787 13-274 (587)
94 2wir_A Pesta, alpha/beta hydro 99.6 3.7E-16 1.3E-20 165.2 11.8 126 567-707 55-189 (313)
95 1ufo_A Hypothetical protein TT 99.6 7.5E-16 2.5E-20 155.0 13.5 176 576-786 13-199 (238)
96 2gop_A Trilobed protease; beta 99.6 2.7E-15 9.2E-20 160.7 18.4 248 155-519 16-290 (347)
97 1imj_A CIB, CCG1-interacting f 99.6 1.6E-15 5.4E-20 149.8 14.3 161 571-787 14-177 (210)
98 2o7r_A CXE carboxylesterase; a 99.6 4.6E-16 1.6E-20 166.5 11.1 124 574-708 64-206 (338)
99 3qh4_A Esterase LIPW; structur 99.6 1.8E-15 6.2E-20 160.2 15.5 128 567-709 64-200 (317)
100 3r0v_A Alpha/beta hydrolase fo 99.6 6.8E-15 2.3E-19 150.3 19.3 194 568-787 7-234 (262)
101 4h0c_A Phospholipase/carboxyle 99.6 2.5E-16 8.5E-21 155.8 8.1 159 588-787 18-179 (210)
102 2bkl_A Prolyl endopeptidase; m 99.6 7.2E-15 2.5E-19 173.2 21.8 268 158-521 72-350 (695)
103 3rm3_A MGLP, thermostable mono 99.6 1.2E-15 4.2E-20 157.0 13.4 183 591-787 39-233 (270)
104 1fj2_A Protein (acyl protein t 99.6 2.4E-15 8.1E-20 151.0 15.0 159 580-786 14-192 (232)
105 2y6u_A Peroxisomal membrane pr 99.6 3.2E-15 1.1E-19 163.5 17.0 137 567-708 24-174 (398)
106 3om8_A Probable hydrolase; str 99.6 1.5E-14 5.2E-19 148.9 21.0 202 568-788 9-237 (266)
107 1yr2_A Prolyl oligopeptidase; 99.6 8.6E-15 2.9E-19 173.8 21.8 268 158-521 111-394 (741)
108 3cn9_A Carboxylesterase; alpha 99.6 2.2E-15 7.4E-20 151.0 13.9 153 588-787 20-194 (226)
109 3ain_A 303AA long hypothetical 99.6 3.3E-15 1.1E-19 158.5 15.3 127 567-708 69-202 (323)
110 3u4y_A Uncharacterized protein 99.6 3.2E-13 1.1E-17 143.3 30.7 242 158-521 44-303 (331)
111 3d0k_A Putative poly(3-hydroxy 99.6 3.2E-15 1.1E-19 157.3 14.9 131 570-707 34-178 (304)
112 4fle_A Esterase; structural ge 99.6 1.8E-15 6E-20 148.9 11.9 160 592-785 2-163 (202)
113 2uz0_A Esterase, tributyrin es 99.6 1.4E-15 4.7E-20 156.1 11.3 195 571-786 16-221 (263)
114 3iuj_A Prolyl endopeptidase; h 99.6 5.1E-14 1.8E-18 165.6 26.1 265 101-487 133-415 (693)
115 3ia2_A Arylesterase; alpha-bet 99.6 1.4E-14 4.9E-19 149.2 18.7 119 568-706 3-122 (271)
116 1lzl_A Heroin esterase; alpha/ 99.6 8.9E-15 3E-19 155.4 17.6 130 567-709 55-194 (323)
117 1brt_A Bromoperoxidase A2; hal 99.6 1.5E-14 5.3E-19 149.7 19.0 102 593-706 24-126 (277)
118 3kxp_A Alpha-(N-acetylaminomet 99.6 1.1E-14 3.8E-19 153.6 18.2 192 572-788 56-284 (314)
119 2c7b_A Carboxylesterase, ESTE1 99.6 3.5E-15 1.2E-19 157.6 14.2 126 567-707 52-186 (311)
120 4b6g_A Putative esterase; hydr 99.6 6.7E-16 2.3E-20 160.6 8.2 197 569-786 29-246 (283)
121 3b5e_A MLL8374 protein; NP_108 99.6 2E-15 6.9E-20 150.9 11.1 165 573-786 15-184 (223)
122 2xua_A PCAD, 3-oxoadipate ENOL 99.6 8E-15 2.8E-19 151.0 15.6 199 572-788 10-235 (266)
123 3v48_A Aminohydrolase, putativ 99.6 6E-15 2E-19 152.1 14.6 187 590-788 13-229 (268)
124 2ocg_A Valacyclovir hydrolase; 99.6 1.1E-14 3.9E-19 148.5 16.4 196 572-788 10-225 (254)
125 3k6k_A Esterase/lipase; alpha/ 99.6 7.3E-15 2.5E-19 156.0 14.9 183 572-787 66-266 (322)
126 4dnp_A DAD2; alpha/beta hydrol 99.6 5.8E-15 2E-19 151.2 13.5 188 591-787 19-236 (269)
127 1zoi_A Esterase; alpha/beta hy 99.6 1.4E-14 4.9E-19 149.8 16.4 119 569-705 5-124 (276)
128 1auo_A Carboxylesterase; hydro 99.6 5.4E-15 1.8E-19 146.8 12.6 153 588-787 10-185 (218)
129 1q0r_A RDMC, aclacinomycin met 99.6 2.1E-14 7.2E-19 150.4 17.8 121 571-706 8-129 (298)
130 3fob_A Bromoperoxidase; struct 99.6 1.9E-14 6.5E-19 149.4 17.3 117 569-705 12-129 (281)
131 3oos_A Alpha/beta hydrolase fa 99.6 7E-15 2.4E-19 151.3 13.9 186 591-787 22-249 (278)
132 3sty_A Methylketone synthase 1 99.6 2.1E-14 7.3E-19 147.1 17.4 108 589-706 9-116 (267)
133 3u1t_A DMMA haloalkane dehalog 99.6 1.3E-14 4.4E-19 152.0 16.1 116 572-707 17-132 (309)
134 1a8q_A Bromoperoxidase A1; hal 99.6 6E-14 2.1E-18 144.7 20.9 117 569-705 4-121 (274)
135 4ezi_A Uncharacterized protein 99.6 1.7E-14 5.8E-19 155.1 16.9 140 569-710 51-205 (377)
136 1jjf_A Xylanase Z, endo-1,4-be 99.6 7.1E-15 2.4E-19 151.6 13.5 172 571-786 41-225 (268)
137 1a88_A Chloroperoxidase L; hal 99.6 2.7E-14 9.2E-19 147.5 17.8 119 569-705 4-123 (275)
138 1a8s_A Chloroperoxidase F; hal 99.6 2.7E-14 9.3E-19 147.3 17.8 118 568-705 3-121 (273)
139 2r8b_A AGR_C_4453P, uncharacte 99.6 6.5E-15 2.2E-19 150.1 12.6 149 590-786 60-215 (251)
140 2puj_A 2-hydroxy-6-OXO-6-pheny 99.6 3.1E-14 1.1E-18 148.3 17.8 186 592-787 33-254 (286)
141 1l0q_A Surface layer protein; 99.6 1.9E-12 6.5E-17 140.8 32.5 245 102-484 37-282 (391)
142 1c4x_A BPHD, protein (2-hydrox 99.6 5.5E-14 1.9E-18 146.1 19.2 201 571-787 14-253 (285)
143 3g9x_A Haloalkane dehalogenase 99.6 8.9E-15 3E-19 152.5 13.2 116 572-706 18-133 (299)
144 3dqz_A Alpha-hydroxynitrIle ly 99.6 2E-14 6.9E-19 146.5 15.6 104 593-706 5-108 (258)
145 2h1i_A Carboxylesterase; struc 99.6 1.1E-14 3.9E-19 145.6 13.4 151 590-787 36-194 (226)
146 3qvm_A OLEI00960; structural g 99.6 7.2E-15 2.5E-19 151.5 12.2 186 592-787 28-246 (282)
147 1nr0_A Actin interacting prote 99.6 6.1E-13 2.1E-17 154.3 29.5 299 104-484 26-362 (611)
148 3r40_A Fluoroacetate dehalogen 99.6 4.8E-14 1.6E-18 147.3 18.2 121 571-707 20-140 (306)
149 1iup_A META-cleavage product h 99.6 3.2E-14 1.1E-18 147.9 16.3 196 572-787 13-241 (282)
150 2yys_A Proline iminopeptidase- 99.6 4.2E-14 1.4E-18 147.3 17.1 121 570-707 9-130 (286)
151 3u4y_A Uncharacterized protein 99.6 7.6E-13 2.6E-17 140.4 27.3 258 101-486 44-313 (331)
152 3e0x_A Lipase-esterase related 99.6 6.9E-14 2.4E-18 140.9 18.2 180 590-787 14-216 (245)
153 3hfq_A Uncharacterized protein 99.6 3.1E-13 1.1E-17 144.7 24.2 266 104-484 47-326 (347)
154 1tqh_A Carboxylesterase precur 99.6 2.5E-14 8.4E-19 145.6 14.7 179 592-787 16-210 (247)
155 1pby_B Quinohemoprotein amine 99.6 4.2E-13 1.4E-17 142.4 24.8 261 156-523 36-311 (337)
156 1r88_A MPT51/MPB51 antigen; AL 99.6 8.1E-15 2.8E-19 152.2 11.1 198 572-787 21-237 (280)
157 1mtz_A Proline iminopeptidase; 99.6 1.2E-14 4E-19 151.7 12.0 121 572-708 13-134 (293)
158 3fsg_A Alpha/beta superfamily 99.6 1.7E-14 5.8E-19 148.0 12.7 185 591-787 20-236 (272)
159 2wue_A 2-hydroxy-6-OXO-6-pheny 99.6 6.7E-14 2.3E-18 146.2 17.4 119 572-706 21-141 (291)
160 2r11_A Carboxylesterase NP; 26 99.5 4.6E-14 1.6E-18 148.4 16.3 119 572-708 53-171 (306)
161 3d7r_A Esterase; alpha/beta fo 99.5 2.6E-14 9E-19 151.9 14.5 116 576-708 84-205 (326)
162 2xt0_A Haloalkane dehalogenase 99.5 1.4E-13 4.8E-18 144.2 19.7 118 574-706 33-150 (297)
163 1jji_A Carboxylesterase; alpha 99.5 1.1E-14 3.7E-19 153.8 11.2 124 568-708 61-193 (311)
164 1gkl_A Endo-1,4-beta-xylanase 99.5 6.9E-14 2.4E-18 146.3 17.0 180 567-787 45-245 (297)
165 3vdx_A Designed 16NM tetrahedr 99.5 6.5E-14 2.2E-18 155.9 17.8 121 567-707 7-128 (456)
166 1gxr_A ESG1, transducin-like e 99.5 3.3E-12 1.1E-16 135.3 30.3 266 104-507 59-326 (337)
167 2qm0_A BES; alpha-beta structu 99.5 4.5E-15 1.6E-19 153.7 7.8 185 572-785 28-237 (275)
168 2fx5_A Lipase; alpha-beta hydr 99.5 3E-14 1E-18 146.0 13.7 148 578-785 34-192 (258)
169 3hss_A Putative bromoperoxidas 99.5 4.1E-14 1.4E-18 147.2 15.0 184 591-787 42-259 (293)
170 2qru_A Uncharacterized protein 99.5 3.2E-13 1.1E-17 139.6 21.5 119 571-707 12-135 (274)
171 4gqb_B Methylosome protein 50; 99.5 2.5E-12 8.6E-17 137.6 29.0 240 154-520 83-329 (344)
172 1u2e_A 2-hydroxy-6-ketonona-2, 99.5 1.5E-13 5E-18 143.2 18.8 186 593-788 37-258 (289)
173 3s25_A Hypothetical 7-bladed b 99.5 4.6E-13 1.6E-17 139.5 22.3 260 106-522 23-293 (302)
174 1sfr_A Antigen 85-A; alpha/bet 99.5 1.9E-14 6.4E-19 151.4 11.9 204 572-787 19-247 (304)
175 2pl5_A Homoserine O-acetyltran 99.5 9.8E-14 3.4E-18 149.6 17.9 130 572-707 29-181 (366)
176 3vgz_A Uncharacterized protein 99.5 3.2E-12 1.1E-16 136.6 29.4 249 155-522 42-303 (353)
177 1hkh_A Gamma lactamase; hydrol 99.5 6.9E-14 2.3E-18 144.8 15.1 102 593-706 24-126 (279)
178 1b6g_A Haloalkane dehalogenase 99.5 1.3E-13 4.5E-18 145.4 17.1 118 574-706 34-151 (310)
179 3nwo_A PIP, proline iminopepti 99.5 1.4E-13 4.9E-18 146.5 17.5 126 572-707 36-162 (330)
180 3bws_A Protein LP49; two-domai 99.5 5.1E-13 1.7E-17 147.6 22.3 290 156-520 125-430 (433)
181 3i28_A Epoxide hydrolase 2; ar 99.5 5.4E-14 1.8E-18 160.7 14.8 120 569-706 243-362 (555)
182 3u0v_A Lysophospholipase-like 99.5 1.5E-13 5E-18 138.7 16.3 160 588-786 19-197 (239)
183 3p2m_A Possible hydrolase; alp 99.5 8.7E-14 3E-18 148.1 15.0 102 592-707 81-182 (330)
184 1uxo_A YDEN protein; hydrolase 99.5 8.1E-14 2.8E-18 135.6 13.1 149 591-785 3-154 (192)
185 1j1i_A META cleavage compound 99.5 2.7E-13 9.3E-18 141.9 17.9 196 572-787 24-250 (296)
186 3scy_A Hypothetical bacterial 99.5 5.1E-12 1.8E-16 136.0 28.5 270 127-509 27-327 (361)
187 4fhz_A Phospholipase/carboxyle 99.5 2.6E-14 8.9E-19 147.8 9.8 165 579-787 55-233 (285)
188 1ri6_A Putative isomerase YBHE 99.5 2.9E-12 9.8E-17 136.2 26.0 259 104-484 45-317 (343)
189 2vat_A Acetyl-COA--deacetylcep 99.5 4.5E-14 1.6E-18 157.0 12.2 114 591-707 108-236 (444)
190 2ymu_A WD-40 repeat protein; u 99.5 1.2E-12 4.2E-17 150.4 24.1 264 154-506 304-568 (577)
191 2xe4_A Oligopeptidase B; hydro 99.5 6.7E-13 2.3E-17 157.2 22.2 254 162-520 123-398 (751)
192 3i1i_A Homoserine O-acetyltran 99.5 5.5E-14 1.9E-18 152.0 11.8 116 590-707 40-184 (377)
193 2wfl_A Polyneuridine-aldehyde 99.5 4.8E-13 1.6E-17 137.5 18.2 105 590-705 8-113 (264)
194 3zwl_B Eukaryotic translation 99.5 1.6E-11 5.4E-16 131.7 30.8 282 103-522 39-346 (369)
195 3bf7_A Esterase YBFF; thioeste 99.5 1.8E-13 6.2E-18 139.7 14.6 100 591-704 15-114 (255)
196 2qs9_A Retinoblastoma-binding 99.5 5.8E-14 2E-18 137.0 10.1 147 591-785 3-153 (194)
197 2qvb_A Haloalkane dehalogenase 99.5 6E-14 2E-18 146.0 10.8 120 571-707 15-135 (297)
198 3ow8_A WD repeat-containing pr 99.5 2.8E-12 9.7E-17 135.8 23.6 269 154-506 33-309 (321)
199 4h5i_A Guanine nucleotide-exch 99.5 1.9E-12 6.5E-17 139.9 22.6 239 120-474 97-342 (365)
200 1qlw_A Esterase; anisotropic r 99.5 3.1E-13 1.1E-17 143.7 16.1 160 576-786 50-277 (328)
201 2e3j_A Epoxide hydrolase EPHB; 99.5 8.1E-13 2.8E-17 142.3 19.5 122 571-706 10-131 (356)
202 3fm0_A Protein CIAO1; WDR39,SG 99.5 4.3E-12 1.5E-16 135.9 24.9 286 155-511 18-327 (345)
203 2b61_A Homoserine O-acetyltran 99.5 2.8E-13 9.6E-18 146.7 15.8 131 572-707 42-190 (377)
204 1wm1_A Proline iminopeptidase; 99.5 1.3E-12 4.3E-17 137.9 20.3 119 571-706 22-140 (317)
205 1ri6_A Putative isomerase YBHE 99.5 1.3E-11 4.5E-16 131.1 28.3 246 155-508 39-297 (343)
206 1nr0_A Actin interacting prote 99.5 2.5E-12 8.7E-17 149.1 24.6 186 103-318 66-259 (611)
207 4g9e_A AHL-lactonase, alpha/be 99.5 6.1E-14 2.1E-18 144.4 9.8 105 591-705 23-127 (279)
208 1r5m_A SIR4-interacting protei 99.5 3.6E-12 1.2E-16 139.7 24.3 267 154-507 109-414 (425)
209 1azw_A Proline iminopeptidase; 99.5 4.8E-13 1.6E-17 140.9 16.2 119 571-706 19-137 (313)
210 4g56_B MGC81050 protein; prote 99.5 5.9E-13 2E-17 143.4 17.1 288 154-521 43-342 (357)
211 1mj5_A 1,3,4,6-tetrachloro-1,4 99.5 2.1E-13 7.4E-18 142.4 13.3 121 570-707 15-136 (302)
212 3bwx_A Alpha/beta hydrolase; Y 99.5 5.2E-13 1.8E-17 138.7 15.9 120 568-703 10-129 (285)
213 1xkl_A SABP2, salicylic acid-b 99.5 6.5E-13 2.2E-17 137.2 16.5 103 592-705 4-107 (273)
214 1ehy_A Protein (soluble epoxid 99.5 1.8E-12 6E-17 135.5 20.0 117 572-705 17-133 (294)
215 3fla_A RIFR; alpha-beta hydrol 99.5 3.4E-13 1.1E-17 138.2 14.2 185 589-787 17-217 (267)
216 3afi_E Haloalkane dehalogenase 99.5 9.6E-13 3.3E-17 139.1 17.9 115 572-705 15-129 (316)
217 2pm9_A Protein WEB1, protein t 99.5 4.3E-12 1.5E-16 139.0 23.7 295 103-479 19-339 (416)
218 1gxr_A ESG1, transducin-like e 99.5 3.6E-12 1.2E-16 135.0 22.1 279 155-522 11-296 (337)
219 2ymu_A WD-40 repeat protein; u 99.5 7.6E-12 2.6E-16 143.7 26.4 264 154-506 263-527 (577)
220 2xmz_A Hydrolase, alpha/beta h 99.5 4E-13 1.4E-17 138.3 14.0 102 593-706 17-118 (269)
221 3c6x_A Hydroxynitrilase; atomi 99.5 7E-13 2.4E-17 135.7 15.6 103 592-705 3-106 (257)
222 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.7E-11 5.9E-16 136.3 28.3 262 155-521 104-392 (450)
223 3kda_A CFTR inhibitory factor 99.5 4E-13 1.4E-17 140.2 13.8 114 572-706 18-132 (301)
224 3hfq_A Uncharacterized protein 99.4 1.5E-11 5.2E-16 131.5 26.4 244 154-509 40-307 (347)
225 2q0x_A Protein DUF1749, unchar 99.4 1E-12 3.6E-17 140.0 16.4 106 591-707 37-146 (335)
226 1wom_A RSBQ, sigma factor SIGB 99.4 3.3E-13 1.1E-17 139.2 12.1 187 592-787 20-238 (271)
227 3ow8_A WD repeat-containing pr 99.4 2.5E-12 8.7E-17 136.2 19.2 235 154-472 81-318 (321)
228 2rau_A Putative esterase; NP_3 99.4 1.1E-13 3.7E-18 148.8 8.6 108 591-705 49-179 (354)
229 3d59_A Platelet-activating fac 99.4 2.1E-13 7.2E-18 148.4 10.9 141 588-773 94-279 (383)
230 3s25_A Hypothetical 7-bladed b 99.4 4.3E-12 1.5E-16 132.1 20.0 235 161-523 21-256 (302)
231 1got_B GT-beta; complex (GTP-b 99.4 6.6E-12 2.3E-16 134.1 22.0 268 154-506 56-331 (340)
232 1isp_A Lipase; alpha/beta hydr 99.4 1.2E-12 4E-17 126.1 14.3 134 592-778 3-141 (181)
233 2cjp_A Epoxide hydrolase; HET: 99.4 1.5E-12 5.2E-17 138.2 16.3 120 572-705 19-138 (328)
234 3scy_A Hypothetical bacterial 99.4 9.3E-12 3.2E-16 134.0 22.7 131 293-485 209-347 (361)
235 1dqz_A 85C, protein (antigen 8 99.4 3.9E-13 1.3E-17 139.5 11.2 202 572-787 16-242 (280)
236 3ibt_A 1H-3-hydroxy-4-oxoquino 99.4 1.5E-12 5.3E-17 132.9 15.2 116 572-706 7-123 (264)
237 4ery_A WD repeat-containing pr 99.4 1.9E-11 6.6E-16 128.5 23.4 269 154-506 24-298 (312)
238 3l80_A Putative uncharacterize 99.4 1.1E-13 3.9E-18 144.0 5.8 105 592-706 41-145 (292)
239 1m33_A BIOH protein; alpha-bet 99.4 1.4E-12 4.9E-17 133.1 13.9 94 594-705 15-108 (258)
240 2qmq_A Protein NDRG2, protein 99.4 2.3E-12 7.8E-17 133.7 15.5 123 571-706 18-146 (286)
241 1jof_A Carboxy-CIS,CIS-muconat 99.4 6.1E-11 2.1E-15 127.9 27.2 268 155-520 41-339 (365)
242 3bdv_A Uncharacterized protein 99.4 2.3E-12 7.7E-17 125.2 14.4 136 591-785 16-151 (191)
243 2psd_A Renilla-luciferin 2-mon 99.4 1.3E-12 4.4E-17 138.3 13.5 115 572-704 29-144 (318)
244 1pja_A Palmitoyl-protein thioe 99.4 6.6E-13 2.3E-17 139.1 10.8 104 589-706 33-139 (302)
245 3zwl_B Eukaryotic translation 99.4 4.4E-11 1.5E-15 128.2 24.9 245 154-509 33-281 (369)
246 3i2n_A WD repeat-containing pr 99.4 3.4E-11 1.2E-15 128.6 23.9 291 103-521 25-352 (357)
247 4h5i_A Guanine nucleotide-exch 99.4 2.2E-11 7.6E-16 131.4 22.5 198 104-414 141-344 (365)
248 1erj_A Transcriptional repress 99.4 1.8E-11 6.2E-16 133.6 21.9 264 154-487 65-351 (393)
249 3iz6_a 40S ribosomal protein R 99.4 2.5E-10 8.5E-15 123.9 30.5 275 154-504 67-361 (380)
250 2pbi_B Guanine nucleotide-bind 99.4 3.5E-11 1.2E-15 129.3 23.2 269 154-506 65-345 (354)
251 1ycd_A Hypothetical 27.3 kDa p 99.4 1E-12 3.4E-17 133.1 10.3 166 591-786 4-199 (243)
252 3fm0_A Protein CIAO1; WDR39,SG 99.4 3.2E-11 1.1E-15 129.1 22.0 304 101-474 21-334 (345)
253 3ei3_B DNA damage-binding prot 99.4 3E-10 1E-14 123.0 30.0 290 101-520 78-380 (383)
254 4g56_B MGC81050 protein; prote 99.4 7.2E-12 2.5E-16 134.8 16.9 295 103-483 49-350 (357)
255 3b12_A Fluoroacetate dehalogen 99.1 5.4E-14 1.9E-18 146.8 0.0 109 591-707 24-132 (304)
256 3qmv_A Thioesterase, REDJ; alp 99.4 2E-12 6.8E-17 134.0 11.3 184 591-787 50-249 (280)
257 3mkq_A Coatomer beta'-subunit; 99.3 1.9E-11 6.4E-16 146.7 21.0 239 101-416 18-262 (814)
258 1got_B GT-beta; complex (GTP-b 99.3 3.8E-11 1.3E-15 128.2 21.0 272 103-471 62-339 (340)
259 3vl1_A 26S proteasome regulato 99.3 3.2E-11 1.1E-15 132.4 20.9 273 156-508 100-409 (420)
260 3bws_A Protein LP49; two-domai 99.3 5E-11 1.7E-15 131.5 22.5 290 159-521 69-389 (433)
261 4f21_A Carboxylesterase/phosph 99.3 6.9E-12 2.4E-16 126.8 14.1 168 576-787 25-211 (246)
262 2ynn_A Coatomer subunit beta'; 99.3 6.5E-11 2.2E-15 124.1 22.1 264 154-501 14-284 (304)
263 4gqb_B Methylosome protein 50; 99.3 1.1E-10 3.6E-15 124.9 23.9 199 154-474 128-330 (344)
264 1qe3_A PNB esterase, para-nitr 99.3 2.2E-13 7.6E-18 152.0 3.1 208 570-786 79-296 (489)
265 3guu_A Lipase A; protein struc 99.3 1.8E-11 6.2E-16 133.4 17.4 134 567-711 81-242 (462)
266 1k8k_C P40, ARP2/3 complex 41 99.3 3.8E-10 1.3E-14 121.3 27.3 250 104-475 16-274 (372)
267 3sfz_A APAF-1, apoptotic pepti 99.3 8.3E-11 2.9E-15 148.0 25.1 236 209-523 963-1208(1249)
268 1vyh_C Platelet-activating fac 99.3 1.1E-10 3.6E-15 128.2 22.9 266 154-505 109-398 (410)
269 1jmx_B Amine dehydrogenase; ox 99.3 1.2E-10 4.2E-15 123.9 22.6 260 159-522 5-325 (349)
270 3c8d_A Enterochelin esterase; 99.3 2E-12 7E-17 140.9 8.6 179 572-787 178-364 (403)
271 2j04_A TAU60, YPL007P, hypothe 99.3 4.7E-13 1.6E-17 148.1 3.2 183 154-390 86-286 (588)
272 4ery_A WD repeat-containing pr 99.3 1.4E-10 4.8E-15 121.9 22.2 274 103-473 30-310 (312)
273 1vyh_C Platelet-activating fac 99.3 4.8E-11 1.6E-15 131.0 19.2 274 104-472 116-408 (410)
274 1r5m_A SIR4-interacting protei 99.3 1.2E-10 4.1E-15 127.5 21.6 290 154-523 46-362 (425)
275 2gzs_A IROE protein; enterobac 99.3 3.4E-12 1.2E-16 132.0 8.4 183 568-787 18-232 (278)
276 3mkq_A Coatomer beta'-subunit; 99.3 7E-11 2.4E-15 141.6 21.1 264 154-502 14-285 (814)
277 3frx_A Guanine nucleotide-bind 99.3 5.5E-10 1.9E-14 117.9 25.5 242 154-474 66-316 (319)
278 2xzm_R RACK1; ribosome, transl 99.3 3.2E-10 1.1E-14 121.1 23.7 249 154-474 77-339 (343)
279 2pm9_A Protein WEB1, protein t 99.3 4.9E-11 1.7E-15 130.6 17.6 292 155-523 14-338 (416)
280 1pby_B Quinohemoprotein amine 99.3 1.4E-10 4.7E-15 122.8 20.3 228 180-523 12-270 (337)
281 3frx_A Guanine nucleotide-bind 99.3 3.3E-10 1.1E-14 119.7 23.1 268 154-507 18-306 (319)
282 3dw8_B Serine/threonine-protei 99.3 2.8E-10 9.5E-15 125.9 23.5 267 154-484 29-380 (447)
283 2pbi_B Guanine nucleotide-bind 99.3 2.8E-10 9.7E-15 122.1 22.7 270 103-471 71-353 (354)
284 4e54_B DNA damage-binding prot 99.3 1.9E-10 6.4E-15 127.3 21.8 280 154-504 120-417 (435)
285 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.5E-10 8.4E-15 123.2 22.2 255 104-475 47-341 (365)
286 3qyj_A ALR0039 protein; alpha/ 99.3 4.9E-11 1.7E-15 124.3 16.0 119 571-705 12-130 (291)
287 2j04_A TAU60, YPL007P, hypothe 99.3 1.2E-10 4.2E-15 128.9 19.8 251 154-506 16-286 (588)
288 3vl1_A 26S proteasome regulato 99.3 1E-11 3.5E-16 136.4 11.1 279 156-522 59-365 (420)
289 3dwl_C Actin-related protein 2 99.3 3.2E-11 1.1E-15 130.4 14.2 233 155-503 13-267 (377)
290 3sfz_A APAF-1, apoptotic pepti 99.2 6.2E-11 2.1E-15 149.2 18.2 267 103-506 968-1237(1249)
291 3dwl_C Actin-related protein 2 99.2 5.3E-11 1.8E-15 128.6 15.3 211 104-416 19-239 (377)
292 2aq5_A Coronin-1A; WD40 repeat 99.2 5.6E-10 1.9E-14 121.9 23.0 229 154-503 82-329 (402)
293 1pgu_A Actin interacting prote 99.2 2E-09 6.7E-14 124.3 27.7 279 104-521 26-327 (615)
294 1tca_A Lipase; hydrolase(carbo 99.2 1.4E-10 4.7E-15 121.9 16.3 116 576-707 16-136 (317)
295 2vdu_B TRNA (guanine-N(7)-)-me 99.2 1.1E-09 3.6E-14 121.8 24.4 175 273-520 125-337 (450)
296 4aez_A CDC20, WD repeat-contai 99.2 2.5E-09 8.6E-14 116.7 27.0 262 125-523 111-381 (401)
297 1nir_A Nitrite reductase; hemo 99.2 3.4E-09 1.2E-13 120.4 28.7 303 104-523 186-515 (543)
298 2h7c_A Liver carboxylesterase 99.2 1E-11 3.5E-16 140.4 7.7 132 570-708 95-234 (542)
299 1k8k_C P40, ARP2/3 complex 41 99.2 1.6E-09 5.6E-14 116.3 24.8 249 154-522 9-274 (372)
300 3dm0_A Maltose-binding peripla 99.2 6.1E-10 2.1E-14 131.1 23.3 278 124-473 402-691 (694)
301 2xzm_R RACK1; ribosome, transl 99.2 1.3E-09 4.3E-14 116.4 23.6 272 155-506 23-328 (343)
302 3jrp_A Fusion protein of prote 99.2 2.9E-09 9.8E-14 114.5 26.5 247 154-521 12-286 (379)
303 1erj_A Transcriptional repress 99.2 1.9E-09 6.5E-14 117.4 25.1 248 103-474 130-388 (393)
304 1jmx_B Amine dehydrogenase; ox 99.2 1.9E-09 6.4E-14 114.7 24.4 113 155-307 44-160 (349)
305 2ynn_A Coatomer subunit beta'; 99.2 1.8E-10 6.3E-15 120.7 16.0 235 103-416 20-262 (304)
306 2mad_H Methylamine dehydrogena 99.2 3.2E-08 1.1E-12 106.6 33.8 258 158-523 70-351 (373)
307 2aq5_A Coronin-1A; WD40 repeat 99.2 8.5E-10 2.9E-14 120.5 21.0 183 273-523 104-300 (402)
308 1sq9_A Antiviral protein SKI8; 99.2 3.3E-10 1.1E-14 123.1 17.6 284 125-474 34-394 (397)
309 2pm7_B Protein transport prote 99.2 2.4E-09 8.2E-14 111.7 23.4 237 154-507 10-274 (297)
310 4i19_A Epoxide hydrolase; stru 99.2 3.9E-10 1.3E-14 122.3 16.8 121 571-706 75-204 (388)
311 4a11_B DNA excision repair pro 99.2 6.1E-08 2.1E-12 105.1 34.4 259 154-523 100-366 (408)
312 4aez_A CDC20, WD repeat-contai 99.1 3.6E-09 1.2E-13 115.4 24.1 238 157-522 97-336 (401)
313 3k26_A Polycomb protein EED; W 99.1 1.9E-08 6.7E-13 107.3 29.4 252 154-507 70-355 (366)
314 4aow_A Guanine nucleotide-bind 99.1 7.1E-09 2.4E-13 109.7 25.3 288 154-523 39-338 (340)
315 1r3d_A Conserved hypothetical 99.1 1.7E-10 5.7E-15 118.3 11.6 104 591-705 15-121 (264)
316 1yfq_A Cell cycle arrest prote 99.1 1.3E-08 4.4E-13 107.8 26.3 277 103-509 18-314 (342)
317 3ei3_B DNA damage-binding prot 99.1 4.9E-09 1.7E-13 113.4 23.4 205 154-480 74-285 (383)
318 3iz6_a 40S ribosomal protein R 99.1 9.3E-10 3.2E-14 119.3 17.6 281 103-473 73-373 (380)
319 3gff_A IROE-like serine hydrol 99.1 7.4E-11 2.5E-15 124.5 8.4 178 572-787 22-229 (331)
320 3fle_A SE_1780 protein; struct 99.1 9.7E-10 3.3E-14 110.8 16.2 179 592-787 6-213 (249)
321 1yfq_A Cell cycle arrest prote 99.1 3.3E-09 1.1E-13 112.5 21.2 246 154-522 12-282 (342)
322 3lrv_A PRE-mRNA-splicing facto 99.1 2.3E-08 7.7E-13 106.6 27.8 162 211-480 129-297 (343)
323 3pic_A CIP2; alpha/beta hydrol 99.1 2.5E-10 8.4E-15 118.6 11.8 117 573-706 89-219 (375)
324 1sq9_A Antiviral protein SKI8; 99.1 2.7E-09 9.3E-14 115.8 20.6 259 154-485 17-330 (397)
325 3dm0_A Maltose-binding peripla 99.1 2.8E-09 9.7E-14 125.3 22.3 246 154-482 383-637 (694)
326 4aow_A Guanine nucleotide-bind 99.1 7.9E-09 2.7E-13 109.3 23.5 248 154-479 87-339 (340)
327 2ogt_A Thermostable carboxyles 99.1 7.3E-11 2.5E-15 131.9 7.6 134 570-707 81-224 (498)
328 3lp5_A Putative cell surface h 99.1 5.5E-10 1.9E-14 112.6 13.2 163 593-786 5-196 (250)
329 2wj6_A 1H-3-hydroxy-4-oxoquina 99.1 2E-10 6.8E-15 118.7 10.0 116 572-705 12-128 (276)
330 3jrp_A Fusion protein of prote 99.1 1.3E-08 4.4E-13 109.3 24.6 244 103-475 18-287 (379)
331 1ukc_A ESTA, esterase; fungi, 99.1 2.5E-11 8.4E-16 136.5 3.1 135 570-707 82-226 (522)
332 3ds8_A LIN2722 protein; unkonw 99.1 4.8E-10 1.6E-14 114.2 12.2 174 593-787 4-205 (254)
333 3odt_A Protein DOA1; ubiquitin 99.1 1.3E-08 4.3E-13 106.3 23.4 271 154-523 19-297 (313)
334 1pgu_A Actin interacting prote 99.1 3.8E-09 1.3E-13 121.8 21.3 242 154-522 19-283 (615)
335 2pm7_B Protein transport prote 99.1 1.5E-08 5.1E-13 105.6 23.6 244 104-481 17-290 (297)
336 2oiz_A Aromatic amine dehydrog 99.1 8.6E-08 2.9E-12 102.9 30.0 122 376-523 204-335 (361)
337 3c75_H MADH, methylamine dehyd 99.1 1.3E-07 4.5E-12 102.5 30.9 299 106-523 82-403 (426)
338 2hes_X YDR267CP; beta-propelle 99.1 4.6E-08 1.6E-12 103.6 26.8 240 154-509 59-318 (330)
339 3e5z_A Putative gluconolactona 99.1 1.6E-08 5.5E-13 105.2 22.7 251 156-523 30-287 (296)
340 3i2n_A WD repeat-containing pr 99.1 7.8E-09 2.7E-13 110.1 20.8 251 103-473 72-351 (357)
341 2ha2_A ACHE, acetylcholinester 99.0 1.5E-10 5.2E-15 130.8 7.6 132 570-706 93-232 (543)
342 4g4g_A 4-O-methyl-glucuronoyl 99.0 1.1E-09 3.7E-14 114.9 13.0 115 574-706 123-253 (433)
343 3dw8_B Serine/threonine-protei 99.0 7.6E-09 2.6E-13 114.2 20.8 157 210-416 180-376 (447)
344 1nir_A Nitrite reductase; hemo 99.0 1.8E-08 6.2E-13 114.4 24.0 236 160-522 144-402 (543)
345 3sjl_D Methylamine dehydrogena 99.0 3.3E-07 1.1E-11 97.7 31.8 127 376-523 230-364 (386)
346 3bg1_A Protein SEC13 homolog; 99.0 1.4E-08 4.6E-13 107.0 21.0 233 154-507 14-282 (316)
347 1p0i_A Cholinesterase; serine 99.0 1.9E-10 6.5E-15 129.7 7.0 132 570-707 89-228 (529)
348 2xyi_A Probable histone-bindin 99.0 1.8E-08 6.2E-13 111.0 22.5 185 273-521 204-409 (430)
349 1gpl_A RP2 lipase; serine este 99.0 1.7E-10 5.8E-15 126.6 5.9 112 590-706 68-181 (432)
350 2dg1_A DRP35, lactonase; beta 99.0 8.9E-08 3E-12 101.3 26.5 259 155-521 46-315 (333)
351 3g02_A Epoxide hydrolase; alph 99.0 6.5E-09 2.2E-13 113.1 17.8 120 572-705 93-219 (408)
352 4gga_A P55CDC, cell division c 99.0 9.4E-08 3.2E-12 104.9 27.4 244 156-522 108-353 (420)
353 3f3f_A Nucleoporin SEH1; struc 99.0 1.1E-07 3.7E-12 100.3 26.9 211 154-475 12-249 (351)
354 3dr2_A Exported gluconolactona 99.0 3.7E-08 1.3E-12 103.0 23.0 249 156-519 47-303 (305)
355 3g4e_A Regucalcin; six bladed 99.0 9.7E-08 3.3E-12 99.4 25.9 243 156-510 15-264 (297)
356 2k2q_B Surfactin synthetase th 99.0 8.5E-10 2.9E-14 111.3 9.7 92 590-696 11-109 (242)
357 1ea5_A ACHE, acetylcholinester 99.0 2.4E-10 8.1E-15 128.9 6.0 132 570-707 91-230 (537)
358 2bce_A Cholesterol esterase; h 99.0 2.2E-10 7.6E-15 129.7 5.7 131 570-705 77-222 (579)
359 1thg_A Lipase; hydrolase(carbo 99.0 7.2E-10 2.5E-14 125.0 9.8 132 570-706 102-252 (544)
360 3c5v_A PME-1, protein phosphat 99.0 3.1E-09 1.1E-13 111.9 14.2 105 591-705 37-145 (316)
361 3vu4_A KMHSV2; beta-propeller 99.0 5.6E-08 1.9E-12 104.1 24.3 246 154-473 20-269 (355)
362 2xyi_A Probable histone-bindin 99.0 1.5E-08 5.2E-13 111.7 20.1 148 273-474 254-409 (430)
363 3lcr_A Tautomycetin biosynthet 99.0 3.8E-09 1.3E-13 111.4 14.0 105 589-706 78-186 (319)
364 3mmy_A MRNA export factor; mRN 99.0 7.5E-08 2.6E-12 102.7 24.5 100 154-317 40-148 (368)
365 2oaj_A Protein SNI1; WD40 repe 99.0 7.8E-08 2.7E-12 116.1 27.3 175 104-317 25-230 (902)
366 1llf_A Lipase 3; candida cylin 99.0 9.3E-10 3.2E-14 123.9 9.5 131 570-705 94-243 (534)
367 2fj0_A JuvenIle hormone estera 99.0 1.6E-10 5.5E-15 130.7 3.2 112 592-706 115-233 (551)
368 3jro_A Fusion protein of prote 99.0 1.7E-08 5.7E-13 119.8 20.2 236 154-507 10-274 (753)
369 4ggc_A P55CDC, cell division c 98.9 4.5E-08 1.5E-12 102.4 21.2 239 155-473 69-313 (318)
370 2ghs_A AGR_C_1268P; regucalcin 98.9 1.7E-07 5.8E-12 99.1 25.8 236 156-510 51-294 (326)
371 3k26_A Polycomb protein EED; W 98.9 6E-08 2.1E-12 103.4 22.5 238 126-472 94-363 (366)
372 4gga_A P55CDC, cell division c 98.9 1.6E-07 5.3E-12 103.1 26.2 230 155-506 149-383 (420)
373 3f3f_A Nucleoporin SEH1; struc 98.9 6.8E-08 2.3E-12 101.9 22.2 195 103-414 18-250 (351)
374 1dx4_A ACHE, acetylcholinester 98.9 1.1E-09 3.7E-14 124.7 8.7 118 589-706 138-267 (585)
375 1kez_A Erythronolide synthase; 98.9 3.4E-09 1.1E-13 110.8 11.8 106 588-706 63-172 (300)
376 3bg1_A Protein SEC13 homolog; 98.9 3.6E-08 1.2E-12 103.7 19.5 247 104-483 21-300 (316)
377 3icv_A Lipase B, CALB; circula 98.9 5.1E-09 1.7E-13 108.1 12.4 116 576-707 50-170 (316)
378 2j04_B YDR362CP, TAU91; beta p 98.9 9.9E-09 3.4E-13 115.7 15.4 268 154-500 208-496 (524)
379 3v7d_B Cell division control p 98.9 1E-06 3.6E-11 97.6 31.4 290 121-509 136-453 (464)
380 3mmy_A MRNA export factor; mRN 98.9 4.5E-08 1.5E-12 104.4 19.4 269 103-463 46-335 (368)
381 1ex9_A Lactonizing lipase; alp 98.9 3.5E-09 1.2E-13 109.6 10.1 102 590-706 5-109 (285)
382 4e54_B DNA damage-binding prot 98.9 4.3E-08 1.5E-12 108.2 19.0 205 210-481 122-331 (435)
383 2d81_A PHB depolymerase; alpha 98.9 2.3E-09 7.8E-14 111.8 7.9 110 667-787 7-118 (318)
384 3jro_A Fusion protein of prote 98.9 1.1E-07 3.9E-12 112.6 23.4 246 99-474 12-284 (753)
385 2oaj_A Protein SNI1; WD40 repe 98.9 1.4E-07 4.7E-12 113.9 24.3 214 154-482 18-247 (902)
386 4a11_B DNA excision repair pro 98.9 1.7E-07 5.8E-12 101.6 22.9 224 154-482 44-281 (408)
387 2hes_X YDR267CP; beta-propelle 98.9 5.8E-07 2E-11 95.0 26.3 201 154-474 15-229 (330)
388 4fol_A FGH, S-formylglutathion 98.9 1.3E-08 4.4E-13 105.5 12.9 197 572-787 24-259 (299)
389 1ys1_X Lipase; CIS peptide Leu 98.8 5.6E-09 1.9E-13 109.5 9.8 105 590-706 6-114 (320)
390 3odt_A Protein DOA1; ubiquitin 98.8 5.4E-08 1.8E-12 101.4 17.4 262 125-480 37-299 (313)
391 4ggc_A P55CDC, cell division c 98.8 7E-07 2.4E-11 93.1 25.8 243 157-522 29-273 (318)
392 1qks_A Cytochrome CD1 nitrite 98.8 1.7E-06 6E-11 98.0 30.7 284 104-523 161-478 (567)
393 3bix_A Neuroligin-1, neuroligi 98.8 1.9E-09 6.6E-14 122.4 5.9 130 570-705 108-248 (574)
394 1bu8_A Protein (pancreatic lip 98.8 2.3E-09 7.9E-14 117.9 6.3 113 589-706 67-181 (452)
395 3n2z_B Lysosomal Pro-X carboxy 98.8 1.8E-08 6.1E-13 109.9 13.0 111 590-705 37-160 (446)
396 4gq1_A NUP37; propeller, trans 98.8 8.7E-08 3E-12 104.2 18.6 259 158-506 94-378 (393)
397 3gre_A Serine/threonine-protei 98.8 3.6E-07 1.2E-11 100.5 23.0 268 104-483 71-365 (437)
398 2mad_H Methylamine dehydrogena 98.8 8.5E-07 2.9E-11 95.4 25.2 84 377-483 272-356 (373)
399 2x5x_A PHB depolymerase PHAZ7; 98.8 9.2E-09 3.1E-13 108.4 9.3 121 577-707 29-166 (342)
400 3ils_A PKS, aflatoxin biosynth 98.8 1.6E-08 5.4E-13 103.6 10.7 102 589-705 18-122 (265)
401 1w52_X Pancreatic lipase relat 98.8 3.9E-09 1.3E-13 116.1 6.5 112 590-706 68-181 (452)
402 1qks_A Cytochrome CD1 nitrite 98.8 2.1E-06 7.1E-11 97.4 29.1 304 103-523 203-539 (567)
403 3vu4_A KMHSV2; beta-propeller 98.8 4.4E-07 1.5E-11 97.1 22.5 188 155-415 60-273 (355)
404 3gre_A Serine/threonine-protei 98.7 6.1E-07 2.1E-11 98.7 22.2 205 154-483 64-298 (437)
405 3e5z_A Putative gluconolactona 98.7 1.1E-06 3.7E-11 91.2 22.8 253 101-482 32-291 (296)
406 1ei9_A Palmitoyl protein thioe 98.7 2E-08 6.8E-13 103.4 9.3 104 593-704 6-114 (279)
407 2j04_B YDR362CP, TAU91; beta p 98.7 1.2E-07 4E-12 106.9 16.3 162 273-504 235-414 (524)
408 2oiz_A Aromatic amine dehydrog 98.7 1.5E-06 5.2E-11 93.1 23.4 99 376-500 258-360 (361)
409 4gq1_A NUP37; propeller, trans 98.7 6.2E-07 2.1E-11 97.4 20.1 59 154-227 137-207 (393)
410 2dg1_A DRP35, lactonase; beta 98.7 2.6E-06 9.1E-11 89.8 24.1 252 102-476 50-315 (333)
411 3lrv_A PRE-mRNA-splicing facto 98.7 2.2E-06 7.6E-11 90.9 22.6 157 155-415 127-294 (343)
412 2zyr_A Lipase, putative; fatty 98.7 2.8E-08 9.6E-13 108.0 7.7 111 590-707 20-167 (484)
413 3c75_H MADH, methylamine dehyd 98.7 6.2E-06 2.1E-10 89.4 26.1 85 376-483 323-408 (426)
414 1hpl_A Lipase; hydrolase(carbo 98.6 2E-08 6.8E-13 109.8 6.5 111 590-706 67-180 (449)
415 1mda_H Methylamine dehydrogena 98.6 1.3E-06 4.5E-11 93.1 20.0 256 158-523 69-347 (368)
416 3sjl_D Methylamine dehydrogena 98.6 8.8E-06 3E-10 86.7 26.2 102 374-498 282-384 (386)
417 3v7d_B Cell division control p 98.6 2.2E-06 7.5E-11 95.0 22.7 272 160-523 127-422 (464)
418 3dr2_A Exported gluconolactona 98.6 1.7E-06 5.8E-11 90.3 19.7 252 101-475 49-304 (305)
419 1rp1_A Pancreatic lipase relat 98.6 3.2E-08 1.1E-12 108.2 5.5 111 590-706 68-180 (450)
420 2ece_A 462AA long hypothetical 98.5 2.9E-05 9.9E-10 83.3 27.1 202 271-506 162-399 (462)
421 1npe_A Nidogen, entactin; glyc 98.5 2.2E-05 7.4E-10 80.0 25.4 204 155-483 37-244 (267)
422 1npe_A Nidogen, entactin; glyc 98.5 7.1E-06 2.4E-10 83.6 21.7 178 273-521 58-237 (267)
423 3dsm_A Uncharacterized protein 98.5 9.6E-06 3.3E-10 85.5 23.3 216 155-481 85-305 (328)
424 3hrp_A Uncharacterized protein 98.5 2.7E-05 9.3E-10 84.7 27.3 215 154-485 131-362 (409)
425 3dsm_A Uncharacterized protein 98.5 8.4E-06 2.9E-10 86.0 22.2 240 164-521 52-301 (328)
426 2ghs_A AGR_C_1268P; regucalcin 98.5 4.9E-06 1.7E-10 87.7 19.8 233 101-466 53-294 (326)
427 2ece_A 462AA long hypothetical 98.5 3.2E-05 1.1E-09 83.0 25.5 72 373-462 322-399 (462)
428 2dst_A Hypothetical protein TT 98.5 3.3E-07 1.1E-11 82.4 8.5 82 592-694 22-103 (131)
429 1jmk_C SRFTE, surfactin synthe 98.5 7.1E-07 2.4E-11 88.8 11.8 90 592-706 17-109 (230)
430 2oit_A Nucleoporin 214KDA; NH2 98.5 1E-05 3.5E-10 89.0 21.8 168 155-414 94-279 (434)
431 3g4e_A Regucalcin; six bladed 98.4 5.7E-06 1.9E-10 85.9 18.5 238 102-465 18-263 (297)
432 2w18_A PALB2, fancn, partner a 98.4 1.2E-05 4.2E-10 83.5 20.3 166 156-411 181-355 (356)
433 2ovr_B FBW7, F-BOX/WD repeat p 98.4 4E-05 1.4E-09 84.3 24.5 296 125-521 137-441 (445)
434 2w18_A PALB2, fancn, partner a 98.4 2E-05 6.7E-10 82.0 20.2 227 154-473 112-355 (356)
435 2cb9_A Fengycin synthetase; th 98.4 2E-06 6.8E-11 86.6 12.0 92 591-706 21-115 (244)
436 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 8.2E-05 2.8E-09 77.2 24.5 196 274-521 93-298 (314)
437 2oit_A Nucleoporin 214KDA; NH2 98.3 9.5E-06 3.3E-10 89.2 17.8 95 272-412 117-222 (434)
438 3tej_A Enterobactin synthase c 98.3 2.3E-06 7.7E-11 90.4 12.0 103 591-708 100-206 (329)
439 2hih_A Lipase 46 kDa form; A1 98.3 2E-06 6.8E-11 93.2 10.2 101 591-706 51-212 (431)
440 2hfk_A Pikromycin, type I poly 98.3 4.4E-06 1.5E-10 87.8 12.7 105 594-705 91-199 (319)
441 2iwa_A Glutamine cyclotransfer 98.3 6.7E-05 2.3E-09 75.6 20.7 181 272-523 43-238 (266)
442 1rwi_B Serine/threonine-protei 98.2 0.00017 5.8E-09 73.0 23.6 175 273-521 87-263 (270)
443 3v65_B Low-density lipoprotein 98.2 0.00021 7.1E-09 77.1 23.6 178 273-520 138-316 (386)
444 1ijq_A LDL receptor, low-densi 98.2 0.00032 1.1E-08 73.3 24.3 229 167-523 3-239 (316)
445 2dsn_A Thermostable lipase; T1 98.2 5.8E-06 2E-10 88.2 10.5 103 591-706 5-164 (387)
446 3v64_C Agrin; beta propeller, 98.2 0.00044 1.5E-08 73.4 25.3 178 273-520 95-273 (349)
447 1mda_H Methylamine dehydrogena 98.1 8E-05 2.7E-09 79.3 19.0 84 377-485 269-354 (368)
448 2p4o_A Hypothetical protein; p 98.1 0.0011 3.7E-08 68.8 27.1 228 156-508 34-278 (306)
449 2ovr_B FBW7, F-BOX/WD repeat p 98.1 0.00024 8.3E-09 78.0 23.1 264 160-522 124-391 (445)
450 3fvz_A Peptidyl-glycine alpha- 98.1 0.00086 3E-08 70.3 26.2 116 374-522 198-322 (329)
451 1fwx_A Nitrous oxide reductase 98.1 3.6E-05 1.2E-09 85.5 15.6 116 154-308 85-208 (595)
452 2qe8_A Uncharacterized protein 98.1 0.00034 1.2E-08 74.0 22.3 109 374-507 197-309 (343)
453 2iwa_A Glutamine cyclotransfer 98.1 0.00012 4.1E-09 73.7 17.3 204 157-477 24-237 (266)
454 1fwx_A Nitrous oxide reductase 98.0 3.3E-05 1.1E-09 85.8 13.9 104 273-413 254-361 (595)
455 3p5b_L Low density lipoprotein 98.0 0.00093 3.2E-08 72.3 24.4 182 273-523 134-321 (400)
456 3tjm_A Fatty acid synthase; th 98.0 1.5E-05 5.2E-10 82.0 9.5 97 590-706 22-124 (283)
457 3sov_A LRP-6, low-density lipo 98.0 0.0016 5.4E-08 68.0 24.9 160 155-415 36-199 (318)
458 3v64_C Agrin; beta propeller, 98.0 0.00097 3.3E-08 70.6 23.4 160 154-415 73-236 (349)
459 3hrp_A Uncharacterized protein 98.0 0.00094 3.2E-08 72.5 23.7 98 159-308 176-280 (409)
460 3v65_B Low-density lipoprotein 98.0 0.00057 2E-08 73.6 21.5 160 154-415 116-279 (386)
461 1p22_A F-BOX/WD-repeat protein 97.9 0.0013 4.4E-08 71.9 23.6 222 160-522 138-365 (435)
462 3no2_A Uncharacterized protein 97.9 0.0011 3.6E-08 67.8 21.3 176 273-520 56-251 (276)
463 1ijq_A LDL receptor, low-densi 97.8 0.0027 9.1E-08 66.2 23.4 161 154-415 30-197 (316)
464 1p22_A F-BOX/WD-repeat protein 97.8 0.00051 1.8E-08 75.1 18.6 221 106-415 141-367 (435)
465 4ebb_A Dipeptidyl peptidase 2; 97.8 0.00018 6.3E-09 79.2 14.7 111 590-706 41-163 (472)
466 1whs_A Serine carboxypeptidase 97.8 4.3E-05 1.5E-09 75.8 8.5 137 571-710 29-190 (255)
467 3p5b_L Low density lipoprotein 97.8 0.0017 5.8E-08 70.2 21.7 162 154-416 112-280 (400)
468 3sov_A LRP-6, low-density lipo 97.8 0.0018 6.1E-08 67.6 21.1 181 273-523 57-239 (318)
469 2fp8_A Strictosidine synthase; 97.8 0.0037 1.3E-07 65.1 23.3 194 274-521 102-312 (322)
470 3nol_A Glutamine cyclotransfer 97.7 0.002 6.8E-08 64.1 19.4 178 272-521 64-255 (262)
471 1rwi_B Serine/threonine-protei 97.7 0.0026 8.7E-08 64.1 21.0 174 273-521 46-221 (270)
472 1n7d_A LDL receptor, low-densi 97.7 0.00022 7.7E-09 83.0 14.0 180 273-522 428-614 (699)
473 1ivy_A Human protective protei 97.7 6.6E-05 2.3E-09 81.8 8.8 130 572-708 30-183 (452)
474 3qqz_A Putative uncharacterize 97.7 0.0054 1.8E-07 61.2 21.5 209 154-476 27-252 (255)
475 3m0c_C LDL receptor, low-densi 97.7 0.005 1.7E-07 72.2 24.5 182 273-523 446-633 (791)
476 1q7f_A NHL, brain tumor CG1071 97.6 0.0093 3.2E-07 60.6 23.9 175 273-520 100-278 (286)
477 1n7d_A LDL receptor, low-densi 97.6 0.00055 1.9E-08 79.7 15.7 146 272-484 474-621 (699)
478 4a0p_A LRP6, LRP-6, low-densit 97.6 0.0083 2.8E-07 68.7 24.5 161 154-416 37-200 (628)
479 2z2n_A Virginiamycin B lyase; 97.5 0.013 4.4E-07 59.6 23.2 173 272-522 119-295 (299)
480 3m0c_C LDL receptor, low-densi 97.5 0.006 2.1E-07 71.5 22.6 161 154-416 424-592 (791)
481 1pjx_A Dfpase, DIISOPROPYLFLUO 97.5 0.0094 3.2E-07 61.3 22.0 161 155-415 118-301 (314)
482 4a0p_A LRP6, LRP-6, low-densit 97.5 0.015 5.1E-07 66.5 25.0 178 273-523 59-238 (628)
483 3s94_A LRP-6, low-density lipo 97.5 0.01 3.5E-07 67.8 22.9 204 154-481 40-247 (619)
484 1q7f_A NHL, brain tumor CG1071 97.3 0.0081 2.8E-07 61.1 18.1 93 273-412 142-237 (286)
485 2qc5_A Streptogramin B lactona 97.3 0.051 1.8E-06 55.0 24.0 171 273-520 83-258 (300)
486 3qqz_A Putative uncharacterize 97.2 0.025 8.4E-07 56.4 20.1 204 211-520 30-251 (255)
487 3nol_A Glutamine cyclotransfer 97.2 0.014 4.9E-07 57.9 18.1 199 158-475 47-254 (262)
488 3mbr_X Glutamine cyclotransfer 97.2 0.042 1.4E-06 54.0 21.0 178 272-521 42-234 (243)
489 3nok_A Glutaminyl cyclase; bet 97.2 0.013 4.4E-07 58.3 16.6 174 273-519 75-263 (268)
490 3fvz_A Peptidyl-glycine alpha- 97.1 0.031 1.1E-06 58.2 20.4 120 297-475 198-320 (329)
491 3no2_A Uncharacterized protein 97.1 0.0075 2.6E-07 61.4 15.1 185 269-523 11-196 (276)
492 2qe8_A Uncharacterized protein 97.1 0.011 3.6E-07 62.3 16.5 67 154-224 67-136 (343)
493 3s94_A LRP-6, low-density lipo 97.1 0.11 3.8E-06 59.2 25.9 161 154-416 349-513 (619)
494 3sre_A PON1, serum paraoxonase 97.0 0.14 4.7E-06 53.7 23.4 108 272-414 140-253 (355)
495 2qc5_A Streptogramin B lactona 96.9 0.14 4.9E-06 51.6 22.6 169 273-520 125-298 (300)
496 2px6_A Thioesterase domain; th 96.9 0.003 1E-07 65.7 9.8 96 590-705 44-145 (316)
497 1ac5_A KEX1(delta)P; carboxype 96.8 0.005 1.7E-07 67.7 11.6 130 573-708 48-217 (483)
498 4az3_A Lysosomal protective pr 96.8 0.015 5.1E-07 59.0 14.0 133 572-709 32-186 (300)
499 1cpy_A Serine carboxypeptidase 96.8 0.0037 1.3E-07 67.2 10.1 133 572-709 26-182 (421)
500 2p4o_A Hypothetical protein; p 96.8 0.33 1.1E-05 49.7 24.6 40 155-196 73-113 (306)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=3.9e-54 Score=513.18 Aligned_cols=571 Identities=14% Similarity=0.152 Sum_probs=400.0
Q ss_pred ecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003886 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (789)
Q Consensus 102 ~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (789)
..+||||++|+|.......-.......+|++++. +++.++++..+ +.+..|+|||||++|||+++. .+
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~--~~~~~~l~~~~-----~~~~~~~~SPdG~~la~~~~~-----~i 134 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN--KRQLITEERIP-----NNTQWVTWSPVGHKLAYVWNN-----DI 134 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT--TTEECCSSCCC-----TTEEEEEECSSTTCEEEEETT-----EE
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECC--CCcEEEcccCC-----CcceeeEECCCCCEEEEEECC-----eE
Confidence 3458999999998764332222344788898874 34555665544 468899999999999999765 37
Q ss_pred EEEe-cCCceeEEEecCC------CccccccCCC---cccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCC
Q 003886 182 FELW-SQSQLEKEFHVPQ------TVHGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 251 (789)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~------~~~g~v~~d~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (789)
+... .+++.++++.... +...+||.++ ....++|||||++|||.+.+.... +.|......... ...
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v-~~~~~~~~~~~~---~~~ 210 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEV-PLIEYSFYSDES---LQY 210 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTC-CEEEEEECCSTT---CSS
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCC-ceEEEEeecCCC---CCC
Confidence 7666 5666666554211 1122333322 124689999999999998765422 122211000000 000
Q ss_pred CCCCcceeeCCcccccCCccCceEEEEEccC---C---ceEeccCCC-----CCCccceEEEeeCCCCCccEEEEEeecC
Q 003886 252 SWKGQGDWEEDWGETYAGKRQPSLFVININS---G---EVQAVKGIP-----KSLSVGQVVWAPLNEGLHQYLVFVGWSS 320 (789)
Q Consensus 252 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~---g---~~~~l~~~~-----~~~~~~~~~wSPDg~~~~~~l~f~~~~~ 320 (789)
.......|...+ + ......|+++|+++ + +.+.+. .+ .+..+..++|||||+. +++..++.
T Consensus 211 ~~~~~~~yp~~G-~---~~~~~~l~v~d~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~wspdg~~----~~~~~~r~ 281 (740)
T 4a5s_A 211 PKTVRVPYPKAG-A---VNPTVKFFVVNTDSLSSVTNATSIQIT-APASMLIGDHYLCDVTWATQERI----SLQWLRRI 281 (740)
T ss_dssp CEEEEEECCBTT-S---CCCEEEEEEEETTSCCSSSCCCEEEEC-CCHHHHTSCEEEEEEEEEETTEE----EEEEEESS
T ss_pred CcceeecCCCCc-C---cCCeeEEEEEECCCCCCCCcceEEEec-CCccCCCCCeEEEEEEEeCCCeE----EEEEeCCC
Confidence 000011222221 1 01234799999999 8 666663 21 3445778999999998 88887654
Q ss_pred CceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-------eeec--CCCCCc-----cCcceecCCCCEE
Q 003886 321 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-------VVNL--TESISS-----AFFPRFSPDGKFL 386 (789)
Q Consensus 321 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-------~~~L--t~~~~~-----~~~p~~SpDG~~l 386 (789)
.. ...|+++|+ ++++ .+++ ..+.+. ...|.|||||+.|
T Consensus 282 ~~-----------~~~i~~~d~-----------------~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 282 QN-----------YSVMDICDY-----------------DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp TT-----------EEEEEEEEE-----------------ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred CC-----------EEEEEEEEC-----------------CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 32 236999998 4554 2333 112222 3489999999999
Q ss_pred E-EEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe-
Q 003886 387 V-FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW- 464 (789)
Q Consensus 387 a-~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~- 464 (789)
+ +.+.++ +..+||++|.+++..+++|.+..++.. .+++|++.|||++..
T Consensus 334 ~~~~s~~~--------G~~~l~~~~~~~~~~~~lT~g~~~v~~---------------------~~~~d~~~i~f~~~~~ 384 (740)
T 4a5s_A 334 YKIISNEE--------GYRHICYFQIDKKDCTFITKGTWEVIG---------------------IEALTSDYLYYISNEY 384 (740)
T ss_dssp EEEEECTT--------SCEEEEEEETTCSSCEESCCSSSCEEE---------------------EEEECSSEEEEEESCG
T ss_pred EEEEEcCC--------CceEEEEEECCCCceEecccCCEEEEE---------------------EEEEeCCEEEEEEecC
Confidence 8 666554 457899999998888888876555433 233568899999876
Q ss_pred ---CCeEEEEEEECCCCcEE-EecCC----CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCC
Q 003886 465 ---GSSQVIISVNVSSGELL-RITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSS 536 (789)
Q Consensus 465 ---~~~~~l~~~dl~tg~~~-~lt~~----~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~ 536 (789)
.+..+||++++++++.+ +++.. .+.+....||++++++++.++++. |+.+++++..+++ ...
T Consensus 385 ~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~-~~~-------- 454 (740)
T 4a5s_A 385 KGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDK-GLR-------- 454 (740)
T ss_dssp GGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTE-EEE--------
T ss_pred CCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCc-EEE--------
Confidence 56789999999887765 77743 134556789999999999999988 8889988865432 111
Q ss_pred CCCCCchhhhhccccCceeeEeeecccccceeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc-hhhH-HHH
Q 003886 537 PISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYS-KSL 614 (789)
Q Consensus 537 ~~~~~n~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~-~~~ 614 (789)
+...|+.+...+....+...+. ..+ ..+|..++++++.|+++++.+++|+||++||++++... ..|. ...
T Consensus 455 -~l~~n~~~~~~~~~~~~~~~~~------~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~ 526 (740)
T 4a5s_A 455 -VLEDNSALDKMLQNVQMPSKKL------DFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWA 526 (740)
T ss_dssp -EEECCHHHHHHHTTEECCEEEE------EEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHH
T ss_pred -EeccChhhhhhhhhccCCccEE------EEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHH
Confidence 1233554444454433322211 133 55889999999999988788899999999999887432 2232 233
Q ss_pred HHHH-HCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCC
Q 003886 615 AFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP 693 (789)
Q Consensus 615 ~~la-~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p 693 (789)
..|+ ++||+|+++|+||++++|..+.......++..+++|+.++++++.+++.+|.+||+|+|||+||+++++++.++|
T Consensus 527 ~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p 606 (740)
T 4a5s_A 527 TYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGS 606 (740)
T ss_dssp HHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTC
T ss_pred HHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCC
Confidence 4555 599999999999999999999888888888889999999999999888899999999999999999999999999
Q ss_pred CceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCC-ChhhHHHHHhcCccccCCCCCC-CEEEEEeCCCC
Q 003886 694 DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESP-SVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDL 771 (789)
Q Consensus 694 ~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~-P~Lii~G~~D~ 771 (789)
++|+++|+.+|+.++..+. -.+ .+++++.+ ..+..+.|...+|+.++.++++ |+||+||++|.
T Consensus 607 ~~~~~~v~~~p~~~~~~~~-------~~~--------~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~ 671 (740)
T 4a5s_A 607 GVFKCGIAVAPVSRWEYYD-------SVY--------TERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADD 671 (740)
T ss_dssp SCCSEEEEESCCCCGGGSB-------HHH--------HHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCS
T ss_pred CceeEEEEcCCccchHHhh-------hHH--------HHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCC
Confidence 9999999999999865431 111 12233333 2356778889999999999997 99999999999
Q ss_pred CCChHHHHHHHHHCCC
Q 003886 772 RVPVSNGLQVIYHIPF 787 (789)
Q Consensus 772 ~vp~~~~~~l~~~l~~ 787 (789)
+||++++.+++++|++
T Consensus 672 ~v~~~~~~~l~~~l~~ 687 (740)
T 4a5s_A 672 NVHFQQSAQISKALVD 687 (740)
T ss_dssp SSCTHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHH
Confidence 9999999999998853
No 2
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=8.6e-49 Score=461.86 Aligned_cols=549 Identities=18% Similarity=0.238 Sum_probs=389.5
Q ss_pred CceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcce--e--cccEEEEeC--CCCCe-EEEEecCCCCCCe
Q 003886 108 GTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVE--M--TGASAVVPS--PSGSK-LLVVRNPENESPI 180 (789)
Q Consensus 108 g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~--~--~~~~~~~~S--PdG~~-la~~~~~~~~~~~ 180 (789)
|+.++|...+.+ ...+..||... .+++.++++..+.... . .+...+.|| |||++ |+|..+. ..+
T Consensus 33 ~~~~~~~~~~~~---~~~~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~---~~~ 103 (662)
T 3azo_A 33 GDEVWWVAPRPA---EAGRATLVRRR---ADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG---DQR 103 (662)
T ss_dssp TTEEEEEEEETT---TTTEEEEEEEC---TTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT---TCC
T ss_pred CCeEEEEecCcc---cCCcEEEEEEC---CCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC---CCe
Confidence 347888766433 12466788762 3455667765542210 0 001145555 99999 9998764 346
Q ss_pred EEEEecC----CceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCc
Q 003886 181 QFELWSQ----SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 256 (789)
Q Consensus 181 ~~~i~~~----~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (789)
+|.+..+ ++..+++......|+ .....++|||||++|+|++.+.....
T Consensus 104 l~~~~~~~~g~~~~~~l~~~~~~~~~-----~~~~~~~~spDg~~l~~~~~~~~~~~----------------------- 155 (662)
T 3azo_A 104 LYAFEPDAPGGAVPRPLTPVSAVGGG-----LRWADPVLLPERGEVWCMAEEFTGEG----------------------- 155 (662)
T ss_dssp EEEECTTSTTCCCCEECSCCCCSTTC-----EEEEEEEEETTTTEEEEEEEEECSSS-----------------------
T ss_pred EEEEcCCCCCCCCCEeccCCccCCCC-----ccccCcEECCCCCEEEEEEecccCCC-----------------------
Confidence 8887744 666665543211111 12368999999999999987531100
Q ss_pred ceeeCCcccccCCccCceEEEEEccC------CceEeccCC-CCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeee
Q 003886 257 GDWEEDWGETYAGKRQPSLFVININS------GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 329 (789)
Q Consensus 257 ~~~~~d~g~~~~~~~~~~l~v~d~~~------g~~~~l~~~-~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~ 329 (789)
. .....+|++||+++ ++.+.+ + .....+..++|||||+. |+|+++...... +
T Consensus 156 --------~---~~~~~~i~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~SpDG~~----la~~~~~~~~~~----~ 214 (662)
T 3azo_A 156 --------P---SDVRRFLAAVPLDGSAAADRSAVREL--SDDAHRFVTGPRLSPDGRQ----AVWLAWDHPRMP----W 214 (662)
T ss_dssp --------T---TCEEEEEEEEETTSTTTTCGGGSEES--SCSCSSEECCCEECTTSSE----EEEEEECTTCCT----T
T ss_pred --------C---CCceeEEEEEECCCCccccCCceeEE--EecCCCcccCceECCCCCE----EEEEECCCCCCC----C
Confidence 0 11347899999999 888888 5 44456678999999999 999986542110 0
Q ss_pred eccCCcceEEEecccccchhhhhhhhcCCCC-CC---CeeecCCC-CCccCcceecCCCCEEEEEecCCCCCCCCccccc
Q 003886 330 CYNRPCALYAVRVSLYKSEASELELKESSSE-DL---PVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 404 (789)
Q Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~---~~~~Lt~~-~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~ 404 (789)
....||++|+ + ++ +.++|+.. ......|.|||||+ |+|++..+ +..
T Consensus 215 ---~~~~i~~~d~-----------------~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~--------~~~ 265 (662)
T 3azo_A 215 ---EGTELKTARV-----------------TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT--------GWW 265 (662)
T ss_dssp ---TCEEEEEEEE-----------------CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT--------SSC
T ss_pred ---CCcEEEEEEE-----------------CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC--------CCe
Confidence 1247999998 4 45 66677654 46688999999999 88888664 245
Q ss_pred eeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003886 405 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (789)
Q Consensus 405 ~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt 484 (789)
+||++|+.+++.+.++.....+ ..| .|......+.|++|++ +++++.. +...||.+|++++++++++
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~----------~~p-~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEF----------AGP-LWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBS----------SCC-CCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEETTTTEEEECC
T ss_pred EEEEEECCCCceeecccccccc----------cCc-cccccCceEeEeCCCE-EEEEEEc-CccEEEEEECCCCcEEEec
Confidence 7999998776654444322110 001 1222344567778887 6677777 8899999999999998887
Q ss_pred CCCCCceeEEe-eecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhccccCcee-eEeeecc
Q 003886 485 PAESNFSWSLL-TLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFS-IMKIPVK 562 (789)
Q Consensus 485 ~~~~~~~~~~~-s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~i~~~ 562 (789)
..... ...+ +++++.++++++++..|..+|++++.+++ ...+ +..+. ..+....+. ...+
T Consensus 333 ~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~-~~~l---------~~~~~---~~~~~~~~~~~~~~--- 394 (662)
T 3azo_A 333 GPWTE--WAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR-ARTI---------GARHT---DPVDPAYYPEPQIR--- 394 (662)
T ss_dssp SSCCE--EEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC-EEEE---------ESCCC---CSSCGGGSCCCEEE---
T ss_pred CCCCe--EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc-eEEe---------ecCCc---ccCCccccCcceEE---
Confidence 66542 2345 88999999999999999999999876543 1111 11111 011111111 1222
Q ss_pred cccceeecCCCeeEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCch
Q 003886 563 GVSANLTKGAQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEE 638 (789)
Q Consensus 563 ~~~~~~~~~~g~~l~~~~~~P~~~~----~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~ 638 (789)
.+...+|..++++++.|++++ +++++|+||++||+++......|....+.|+++||.|+++|+||++|+|.+
T Consensus 395 ----~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 395 ----TFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp ----EEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ----EEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 455668899999999998754 457899999999998876555777788899999999999999999999999
Q ss_pred hhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhc-CCCC
Q 003886 639 ALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-TTDI 717 (789)
Q Consensus 639 ~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~-~~~~ 717 (789)
+.....+.++..+++|+.++++++++++.+|.+||+|+|||+||+++++++.+ |++|+++|+.+|+.++..+.. ....
T Consensus 471 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~ 549 (662)
T 3azo_A 471 YRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTHD 549 (662)
T ss_dssp HHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSCG
T ss_pred HHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcccccc
Confidence 98877778888889999999999999988999999999999999999999886 999999999999999877654 1111
Q ss_pred CcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCCC
Q 003886 718 PDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPFS 788 (789)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~~ 788 (789)
....+. +.+.+... +..+.|...+|+.++.++++|+||+||++|.+||++++.+++++|++.
T Consensus 550 ~~~~~~--------~~~~~~~~-~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 611 (662)
T 3azo_A 550 FESRYL--------DFLIGSFE-EFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGC 611 (662)
T ss_dssp GGTTHH--------HHHTCCTT-TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTS
T ss_pred hhhHhH--------HHHhCCCc-cchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHc
Confidence 111111 11222222 556778889999999999999999999999999999999999998753
No 3
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=2.1e-47 Score=453.22 Aligned_cols=556 Identities=14% Similarity=0.147 Sum_probs=384.1
Q ss_pred CCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecC-Cccee-cccEEEEeCCCCCeEEEEecCCC-CCCeE
Q 003886 105 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAP-FPVEM-TGASAVVPSPSGSKLLVVRNPEN-ESPIQ 181 (789)
Q Consensus 105 spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~-~~~~~-~~~~~~~~SPdG~~la~~~~~~~-~~~~~ 181 (789)
+|||++++|..... ++....||+.+.. +++.+.|.... +.... ..+..++|||||++|||..+..+ +..++
T Consensus 80 ~~dG~~~~~~~~~~----~~~~~~l~~~~~~--~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i 153 (710)
T 2xdw_A 80 FKKGKRYFYFYNTG----LQNQRVLYVQDSL--EGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTI 153 (710)
T ss_dssp EEETTEEEEEEECS----SCSSCEEEEESST--TSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEE
T ss_pred EEECCEEEEEEEcC----CceEEEEEEEcCC--CCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEE
Confidence 48999999987642 3445688887653 33333332211 11000 13668999999999999987652 22367
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
++++ .+++..+.+...... ..++|||||+.|+|++.+...... .
T Consensus 154 ~v~d~~tg~~~~~~~~~~~~----------~~~~wspDg~~l~~~~~~~~~~~~--------~----------------- 198 (710)
T 2xdw_A 154 KFMKVDGAKELPDVLERVKF----------SCMAWTHDGKGMFYNAYPQQDGKS--------D----------------- 198 (710)
T ss_dssp EEEETTTTEEEEEEEEEECS----------CCEEECTTSSEEEEEECCCCSSCC--------S-----------------
T ss_pred EEEECCCCCCCcccccCccc----------ceEEEEeCCCEEEEEEECCccccc--------c-----------------
Confidence 7777 566665543322122 689999999999999876431100 0
Q ss_pred CCcccccCCccCceEEEEEccCCceE--eccCCC-CCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcce
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQ--AVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~--~l~~~~-~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l 337 (789)
+..........|+++++.+++.+ .+.... .......+.|||||+. |+|.+.+... ....|
T Consensus 199 ---~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~~----------~~~~l 261 (710)
T 2xdw_A 199 ---GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY----VLLSIREGCD----------PVNRL 261 (710)
T ss_dssp ---SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECSSS----------SCCEE
T ss_pred ---ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCE----EEEEEEccCC----------CccEE
Confidence 00000013467999999887632 221111 1223568899999999 9998853321 13589
Q ss_pred EEEecccccchhhhhhhhcCCCCC------C--CeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEe
Q 003886 338 YAVRVSLYKSEASELELKESSSED------L--PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (789)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~------~--~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~ 409 (789)
|++|+ .+ + ..+.|+.+.... ...|+|||++|+|.++.+. ...+|+++
T Consensus 262 ~~~d~-----------------~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~-------~~~~l~~~ 316 (710)
T 2xdw_A 262 WYCDL-----------------QQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS-------PNYRLINI 316 (710)
T ss_dssp EEEEG-----------------GGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC-------TTCEEEEE
T ss_pred EEEEC-----------------cccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC-------CCCEEEEE
Confidence 99998 33 3 467777654433 3469999999999987641 34689999
Q ss_pred ecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc-EEEecCCCC
Q 003886 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE-LLRITPAES 488 (789)
Q Consensus 410 d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~-~~~lt~~~~ 488 (789)
|+.+++... ...++. .. +. ..+..+.|++ +..++++...++...|+.+++.+|+ .+.++...+
T Consensus 317 d~~~~~~~~----~~~l~~---~~-~~-------~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~ 380 (710)
T 2xdw_A 317 DFTDPEESK----WKVLVP---EH-EK-------DVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVG 380 (710)
T ss_dssp ETTSCCGGG----CEEEEC---CC-SS-------CEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSS
T ss_pred eCCCCCccc----ceeccC---CC-CC-------CeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCc
Confidence 997754210 011111 00 00 0122456774 4568888888999999999996666 566765544
Q ss_pred CceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhccccCceeeEeeeccccccee
Q 003886 489 NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANL 568 (789)
Q Consensus 489 ~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~i~~~~~~~~~ 568 (789)
......++++++.+++.++++++|+.+|++++.+++....+ +... ++.. ++...+...++ .+
T Consensus 381 ~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~-l~~~--~~~~--------~~~~~~~~~~~-------~~ 442 (710)
T 2xdw_A 381 SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRV-FREV--TVKG--------IDASDYQTVQI-------FY 442 (710)
T ss_dssp EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEE-EEEC--CCTT--------CCGGGEEEEEE-------EE
T ss_pred eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEE-eeec--ccCC--------cCccccEEEEE-------EE
Confidence 33344567789999999999999999999998754310111 1110 1111 12222333444 56
Q ss_pred ecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCC
Q 003886 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (789)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~ 647 (789)
++.||.+++++++.|++++..++.|+||++|||++......|......|++ +||+|+++|+||++++|..+.......+
T Consensus 443 ~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 522 (710)
T 2xdw_A 443 PSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 522 (710)
T ss_dssp ECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGG
T ss_pred EcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhc
Confidence 777899999999999977667889999999999887665667666667777 9999999999999999998877655566
Q ss_pred CcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhcc
Q 003886 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (789)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~ 727 (789)
+...++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++..+........|. ..++
T Consensus 523 ~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~--~~~g 600 (710)
T 2xdw_A 523 KQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWT--TDYG 600 (710)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGH--HHHC
T ss_pred CCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhHH--HhCC
Confidence 66678999999999999998999999999999999999999999999999999999999876654332111121 1121
Q ss_pred CccccccCCCCChhhHHHHHhcCccccCC-----CCCC-CEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 728 SKGKDSFTESPSVEDLTRFHSKSPISHIS-----KVKT-PTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~i~~-P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.....+..+.+..++|+.++. ++++ |+||+||++|.+||+.++.+++++|++
T Consensus 601 --------~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~ 658 (710)
T 2xdw_A 601 --------CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQY 658 (710)
T ss_dssp --------CTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHh
Confidence 122335566778899999998 8997 999999999999999999999998863
No 4
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=3.9e-49 Score=457.50 Aligned_cols=521 Identities=17% Similarity=0.225 Sum_probs=377.1
Q ss_pred HHHHHHHHHHHhhcCccccceEEEecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccE
Q 003886 78 EYASLSKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGAS 157 (789)
Q Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~ 157 (789)
+|..+.+.++++...|-. ... .||||++|+|..... ....||.. ++++.+++|.... ..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~--~~~---~~~DG~~la~~s~~~------g~~~lw~~----~~g~~~~lt~~~~----~~~~ 68 (582)
T 3o4h_A 8 EFSRIVRDVERLIAVEKY--SLQ---GVVDGDKLLVVGFSE------GSVNAYLY----DGGETVKLNREPI----NSVL 68 (582)
T ss_dssp CHHHHHHHHHHHHHSCEE--EEE---EEETTTEEEEEEEET------TEEEEEEE----ETTEEEECCSSCC----SEEC
T ss_pred cHHHHHHHHHHHhccchh--eee---cCCCCCeEEEEEccC------CceeEEEE----cCCCcEeeecccc----cccc
Confidence 466666667766666521 222 359999999976431 34567774 3456667765441 2577
Q ss_pred EEEeCCCCCeEEEEecC--CCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 158 AVVPSPSGSKLLVVRNP--ENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 158 ~~~~SPdG~~la~~~~~--~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
.|+|||| +++|.+.. .+....+|.+.. .+...+++.. .+. ...+|||||+.++|++...
T Consensus 69 ~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~-~~~----------~~~~~s~dg~~~~~~s~~~---- 131 (582)
T 3o4h_A 69 DPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV-KPM----------RILSGVDTGEAVVFTGATE---- 131 (582)
T ss_dssp EECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTS-CSB----------EEEEEEECSSCEEEEEECS----
T ss_pred cccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccccccCC-CCc----------eeeeeCCCCCeEEEEecCC----
Confidence 8999999 67787764 223335666654 5554433221 122 4579999999999986542
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (789)
..+.+||+++|+.+++. .... ..++|||||+. |
T Consensus 132 ---------------------------------------~~~~l~d~~~g~~~~l~--~~~~--~~~~~spDG~~----l 164 (582)
T 3o4h_A 132 ---------------------------------------DRVALYALDGGGLRELA--RLPG--FGFVSDIRGDL----I 164 (582)
T ss_dssp ---------------------------------------SCEEEEEEETTEEEEEE--EESS--CEEEEEEETTE----E
T ss_pred ---------------------------------------CCceEEEccCCcEEEee--cCCC--ceEEECCCCCE----E
Confidence 22347899999988884 2222 78999999999 9
Q ss_pred EEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCC
Q 003886 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (789)
Q Consensus 314 ~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~ 393 (789)
+|.+...+. ...||++|+ ++++.++|+.+.+....|+|||||++|+ .+..+
T Consensus 165 a~~~~~~~~-----------~~~i~~~d~-----------------~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~~~ 215 (582)
T 3o4h_A 165 AGLGFFGGG-----------RVSLFTSNL-----------------SSGGLRVFDSGEGSFSSASISPGMKVTA-GLETA 215 (582)
T ss_dssp EEEEEEETT-----------EEEEEEEET-----------------TTCCCEEECCSSCEEEEEEECTTSCEEE-EEECS
T ss_pred EEEEEcCCC-----------CeEEEEEcC-----------------CCCCceEeecCCCccccceECCCCCEEE-EccCC
Confidence 998854321 136999998 7888889998888889999999999998 44332
Q ss_pred CCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCc--------cccCCCEEEEEEEeC
Q 003886 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP--------WLSDGCTMLLSSIWG 465 (789)
Q Consensus 394 ~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~--------ws~Dg~~l~~~~~~~ 465 (789)
+..+|++||+++++.+ ++..... .+..+. |+||| .+++++..+
T Consensus 216 --------~~~~i~~~d~~~~~~~-~~~~~~~-------------------~~~~~~~~~~~~~~~spdg-~~~~~~~~~ 266 (582)
T 3o4h_A 216 --------REARLVTVDPRDGSVE-DLELPSK-------------------DFSSYRPTAITWLGYLPDG-RLAVVARRE 266 (582)
T ss_dssp --------SCEEEEEECTTTCCEE-ECCCSCS-------------------HHHHHCCSEEEEEEECTTS-CEEEEEEET
T ss_pred --------CeeEEEEEcCCCCcEE-EccCCCc-------------------ChhhhhhccccceeEcCCC-cEEEEEEcC
Confidence 2357999999887654 2221100 111234 99999 688999989
Q ss_pred CeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhh
Q 003886 466 SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKV 545 (789)
Q Consensus 466 ~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 545 (789)
+...||.+ |+..+. .. +.+....++ ++ .++++.++..+|+++++++..+ + .+. + .+++..
T Consensus 267 g~~~l~~~----g~~~~~-~~-~~v~~~~~s-dg-~~l~~~s~~~~p~~l~~~d~~~-~-~~~---------l-~~~~~~ 326 (582)
T 3o4h_A 267 GRSAVFID----GERVEA-PQ-GNHGRVVLW-RG-KLVTSHTSLSTPPRIVSLPSGE-P-LLE---------G-GLPEDL 326 (582)
T ss_dssp TEEEEEET----TEEECC-CS-SEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCC-E-EEC---------C-CCCHHH
T ss_pred CcEEEEEE----CCeecc-CC-CceEEEEec-CC-EEEEEEcCCCCCCeEEEEcCCC-c-eEE---------E-ecCCcc
Confidence 98888876 665542 22 223345667 54 5668888899999999988653 1 111 1 111110
Q ss_pred hhccccCce-eeEeeecccccceeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEE
Q 003886 546 KSLLSSRQF-SIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSL 624 (789)
Q Consensus 546 ~~~l~~~~~-~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V 624 (789)
. ..+ ....+ .++..+|.+++++++.|++.+ .++|+||++||+++......|....+.|+++||.|
T Consensus 327 ~-----~~~~~~~~~-------~~~~~~g~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v 392 (582)
T 3o4h_A 327 R-----RSIAGSRLV-------WVESFDGSRVPTYVLESGRAP--TPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHV 392 (582)
T ss_dssp H-----HTEEEEEEE-------EEECTTSCEEEEEEEEETTSC--SSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEE
T ss_pred c-----cccCcceEE-------EEECCCCCEEEEEEEcCCCCC--CCCcEEEEECCCcccccccccCHHHHHHHhCCCEE
Confidence 0 111 22233 556678999999999998643 38999999999988766667788889999999999
Q ss_pred EEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCC
Q 003886 625 LIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 704 (789)
Q Consensus 625 ~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~p 704 (789)
+++|+||++|+|.++.......++...++|+.++++++++++.+| +|+|+|||+||+++++++.++|++|+++|+.+|
T Consensus 393 ~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 470 (582)
T 3o4h_A 393 VMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGAS 470 (582)
T ss_dssp EEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESC
T ss_pred EEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCC
Confidence 999999999999999888778888888999999999999997777 999999999999999999999999999999999
Q ss_pred ccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 003886 705 LCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYH 784 (789)
Q Consensus 705 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~ 784 (789)
+.++..+....+.....+.+ .+++ +..+.+...+|+.++.++++|+|++||++|.+||++++.+++++
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~ 538 (582)
T 3o4h_A 471 VVDWEEMYELSDAAFRNFIE--------QLTG----GSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGE 538 (582)
T ss_dssp CCCHHHHHHTCCHHHHHHHH--------HHTT----TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccCHHHHhhcccchhHHHHH--------HHcC----cCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHH
Confidence 99987766543322100111 1111 45567888999999999999999999999999999999999998
Q ss_pred CCC
Q 003886 785 IPF 787 (789)
Q Consensus 785 l~~ 787 (789)
|++
T Consensus 539 l~~ 541 (582)
T 3o4h_A 539 LLA 541 (582)
T ss_dssp HHH
T ss_pred HHh
Confidence 864
No 5
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=1.1e-49 Score=474.51 Aligned_cols=576 Identities=16% Similarity=0.177 Sum_probs=381.9
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (789)
...+||||++|+|...............+|++++.+ ++.++++.... ....+..++|||||++|||+++. +
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~--~~~~~l~~~~~--~~~~~~~~~~SPdG~~la~~~~~-----~ 135 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH--GDPQSLDPPEV--SNAKLQYAGWGPKGQQLIFIFEN-----N 135 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS--CCCEECCCTTC--CSCCCSBCCBCSSTTCEEEEETT-----E
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCC--CceEeccCCcc--ccccccccEECCCCCEEEEEECC-----e
Confidence 345689999999986543322223346888988743 33344543220 00126689999999999999873 4
Q ss_pred EEEEe-cCCceeEEEecCC-C-----ccccccCCCc---ccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCC
Q 003886 181 QFELW-SQSQLEKEFHVPQ-T-----VHGSVYADGW---FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 250 (789)
Q Consensus 181 ~~~i~-~~~~~~~~~~~~~-~-----~~g~v~~d~~---~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (789)
++.++ .+++..+++.... . +.+++|.++. ...++|||||++|||.+.+.... ..|....... . .
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~-~~~~~~~~~~-~----~ 209 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRV-PIMELPTYTG-S----I 209 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTS-CEEEECCCSS-S----S
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCcc-ceEEeeccCC-c----C
Confidence 77766 5667777665421 1 1112222221 25799999999999998765321 1222110000 0 0
Q ss_pred CCCCCcceeeCCcccccCCccCceEEEEEccCCce-EeccCCCC-----CCccceEEEeeCCCCCccEEEEEeecCCcee
Q 003886 251 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPK-----SLSVGQVVWAPLNEGLHQYLVFVGWSSETRK 324 (789)
Q Consensus 251 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~-~~l~~~~~-----~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~ 324 (789)
........|.++ |.. .....|++||+.+++. +.+. .+. ...+..++|||||+. |++...+..
T Consensus 210 ~~~~~~~~~~~~-G~~---~~~~~l~~~d~~~~~~~~~l~-~~~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~--- 277 (723)
T 1xfd_A 210 YPTVKPYHYPKA-GSE---NPSISLHVIGLNGPTHDLEMM-PPDDPRMREYYITMVKWATSTKV----AVTWLNRAQ--- 277 (723)
T ss_dssp SCCCEEEECCBT-TSC---CCEEEEEEEESSSSCCCEECC-CCCCGGGSSEEEEEEEESSSSEE----EEEEEETTS---
T ss_pred CCcceeccCCCC-CCC---CCeeEEEEEECCCCceeEEee-CCccCCCccceeEEEEEeCCCeE----EEEEEcCCC---
Confidence 001112233333 221 1245899999999884 6663 111 335678999999997 877764432
Q ss_pred eeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCC--CCcc----CcceecCCCCEEEEE-ecCCCCCC
Q 003886 325 LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES--ISSA----FFPRFSPDGKFLVFL-SAKSSVDS 397 (789)
Q Consensus 325 ~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~--~~~~----~~p~~SpDG~~la~~-s~~~~~~~ 397 (789)
....|+++|+ ++++...+... .+.. ..|+|||||++|+|. +.++
T Consensus 278 --------~~~~i~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---- 328 (723)
T 1xfd_A 278 --------NVSILTLCDA-----------------TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ---- 328 (723)
T ss_dssp --------CEEEEEEEET-----------------TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECC----
T ss_pred --------CeEEEEEEeC-----------------CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEeccc----
Confidence 2237999998 66666555321 2222 489999999999998 4443
Q ss_pred CCccccceeEEee-cCCCC---CCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeC--CeEEEE
Q 003886 398 GAHSATDSLHRID-WPTNG---NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG--SSQVII 471 (789)
Q Consensus 398 g~~~~~~~L~~~d-~~~~~---~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~--~~~~l~ 471 (789)
|.+....+|+++| ..++. .+.++.+..++.. .+.|+|||+.|+|.+..+ +...||
T Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~spdg~~l~~~~~~~~~~~~~l~ 389 (723)
T 1xfd_A 329 GGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTK-------------------ILAYDEKGNKIYFLSTEDLPRRRQLY 389 (723)
T ss_dssp SSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEE-------------------EEEEETTTTEEEEEESSSCTTCCEEE
T ss_pred CCCcceeEEEEEeccCCCCccceeEeecCCeEEEe-------------------eeEEcCCCCEEEEEEcCCCCcceEEE
Confidence 2222356899999 45555 4445433222111 247999999999988765 778999
Q ss_pred EEECCCC-cEEEecCC---CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhh
Q 003886 472 SVNVSSG-ELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKS 547 (789)
Q Consensus 472 ~~dl~tg-~~~~lt~~---~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 547 (789)
.+++.++ +.++++.. ...+....|++||+.+++.+++++.|..+++ +...+ .++.+ + ..|+.+..
T Consensus 390 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~---~~~~~------~-~~~~~~~~ 458 (723)
T 1xfd_A 390 SANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDK---KKMFD------L-ETNEHVKK 458 (723)
T ss_dssp EECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTC---CEEEE------E-ECCHHHHH
T ss_pred EEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCC---CEEEE------e-ccChhhhh
Confidence 9998765 55666642 3334557899999999999999999987654 43222 22211 1 12333333
Q ss_pred ccccCcee-eEeeecccccceeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-chhh--HHHHHHHHHCCcE
Q 003886 548 LLSSRQFS-IMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSY--SKSLAFLSSVGYS 623 (789)
Q Consensus 548 ~l~~~~~~-~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~--~~~~~~la~~Gy~ 623 (789)
.+....+. ...+ .++..+| +++++++.|+++++.+++|+||++||+++... ...| ....+.|+++||+
T Consensus 459 ~~~~~~~~~~~~~-------~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~ 530 (723)
T 1xfd_A 459 AINDRQMPKVEYR-------DIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAV 530 (723)
T ss_dssp HHHTSCCCBCCBC-------CEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCE
T ss_pred hhhhccCCCceEE-------EEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEE
Confidence 33333321 2222 4566678 99999999998777788999999999988642 2223 2455677789999
Q ss_pred EEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC----CCceeEE
Q 003886 624 LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAA 699 (789)
Q Consensus 624 V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~----p~~~~a~ 699 (789)
|+++|+||++++|..+.......++...++|+.++++++.+++.+|.+||+|+|||+||+++++++.++ |++|+++
T Consensus 531 vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~ 610 (723)
T 1xfd_A 531 VVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCG 610 (723)
T ss_dssp EECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEE
T ss_pred EEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEE
Confidence 999999999998888776666677777899999999999998888999999999999999999999999 9999999
Q ss_pred EEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCC-CCEEEEEeCCCCCCChHHH
Q 003886 700 AARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNG 778 (789)
Q Consensus 700 v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~P~Lii~G~~D~~vp~~~~ 778 (789)
|+.+|+.++..+ ...+.+.+ ++.+. ...+.+...++..++.+++ +|+||+||++|.+||++++
T Consensus 611 v~~~~~~~~~~~-------~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~ 674 (723)
T 1xfd_A 611 SALSPITDFKLY-------ASAFSERY--------LGLHG-LDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHT 674 (723)
T ss_dssp EEESCCCCTTSS-------BHHHHHHH--------HCCCS-SCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHH
T ss_pred EEccCCcchHHh-------hhhccHhh--------cCCcc-CChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHH
Confidence 999998876432 11111111 11111 1111344556667788999 7999999999999999999
Q ss_pred HHHHHHCC
Q 003886 779 LQVIYHIP 786 (789)
Q Consensus 779 ~~l~~~l~ 786 (789)
.+++++|+
T Consensus 675 ~~~~~~l~ 682 (723)
T 1xfd_A 675 AELITQLI 682 (723)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999885
No 6
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2e-47 Score=456.24 Aligned_cols=559 Identities=17% Similarity=0.208 Sum_probs=381.9
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCC-CCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCC
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 179 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 179 (789)
...+||||++|+|... ..||++++.+.. ...++++... ..+..++|||||++|||+++.
T Consensus 113 ~~~~SpDg~~l~~~~~----------~~i~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~SPDG~~la~~~~~----- 172 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG----------GELYLYDLKQEGKAAVRQLTHGE-----GFATDAKLSPKGGFVSFIRGR----- 172 (741)
T ss_dssp CCEECTTSSEEEEEET----------TEEEEEESSSCSTTSCCBCCCSS-----SCEEEEEECTTSSEEEEEETT-----
T ss_pred eeEECCCCCEEEEEeC----------CcEEEEECCCCCcceEEEcccCC-----cccccccCCCCCCEEEEEeCC-----
Confidence 4456899999999753 478888874321 0445565443 457889999999999999864
Q ss_pred eEEEEe-cCCceeEEEecCCC-----ccccccCC--CcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCC
Q 003886 180 IQFELW-SQSQLEKEFHVPQT-----VHGSVYAD--GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 251 (789)
Q Consensus 180 ~~~~i~-~~~~~~~~~~~~~~-----~~g~v~~d--~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (789)
+++.++ .+++..+++..... ...+++.+ .....++|||||++|+|.+.+..... .+.. ....++.
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~-~~~~-----~~~~p~~- 245 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVP-VQKR-----YEVYADR- 245 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSC-EEEE-----EEECSSC-
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCc-eEec-----CCCCCCc-
Confidence 477666 45555554432111 00111110 01267999999999999987643211 0000 0000000
Q ss_pred CCCCcceeeCCcccccCCccCceEEEEEccC-CceEeccCC-CCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeee
Q 003886 252 SWKGQGDWEEDWGETYAGKRQPSLFVININS-GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 329 (789)
Q Consensus 252 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~-g~~~~l~~~-~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~ 329 (789)
.......|... |+ ......|++||+++ ++.+.+... .....+..++| |||+. |++.+.....
T Consensus 246 ~~~~~~~~~~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~----l~~~~~~~~~------- 309 (741)
T 2ecf_A 246 TDVIEQRYPAA-GD---ANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQH----LSFQRQSRDQ------- 309 (741)
T ss_dssp EEEEEEECCBT-TS---CCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTE----EEEEEEETTS-------
T ss_pred ccceEeecCCC-CC---CCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCE----EEEEEecccC-------
Confidence 00000011111 11 11234899999999 988777311 22345678999 99999 9988742221
Q ss_pred eccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCC-----ccCcceecCCCCEEEEEecCCCCCCCCccccc
Q 003886 330 CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-----SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 404 (789)
Q Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~-----~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~ 404 (789)
....|+++|+ .+++.+.+..... ....++|||||+ +++.+..+ +..
T Consensus 310 ---~~~~i~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~--------g~~ 360 (741)
T 2ecf_A 310 ---KKLDLVEVTL-----------------ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT--------GFQ 360 (741)
T ss_dssp ---SEEEEEEEET-----------------TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT--------SSC
T ss_pred ---CeEEEEEEEC-----------------CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC--------Ccc
Confidence 2347999998 6666666543321 346899999999 66666554 346
Q ss_pred eeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCC-ccccCCCEEEEEEEeCC--eEEEEEEECCCCcEE
Q 003886 405 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN-PWLSDGCTMLLSSIWGS--SQVIISVNVSSGELL 481 (789)
Q Consensus 405 ~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~-~ws~Dg~~l~~~~~~~~--~~~l~~~dl~tg~~~ 481 (789)
+||.+|..++ .+.++..... +..+ .|+|||+.|++.+..++ ...||.+++.++..+
T Consensus 361 ~l~~~~~~~~-~~~l~~~~~~--------------------v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 361 HLYRIDSKGK-AAALTHGNWS--------------------VDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp EEEEECSSSC-EEESCCSSSC--------------------EEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred EEEEEcCCCC-eeeeeecceE--------------------EEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 7999987654 4444332211 1123 49999999999887665 778999998777788
Q ss_pred EecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchh-hhh-ccccC--ce-ee
Q 003886 482 RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEK-VKS-LLSSR--QF-SI 556 (789)
Q Consensus 482 ~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~-~l~~~--~~-~~ 556 (789)
+++...+ .....|++||+.+++.++++..|+.+++++..++. .+. ++. |.. +.. .+... .+ ..
T Consensus 420 ~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~-~~~---------l~~-~~~~~~~~~~~~~~~~~~~~ 487 (741)
T 2ecf_A 420 RLSKAPG-MHSASFARNASVYVDSWSNNSTPPQIELFRANGEK-IAT---------LVE-NDLADPKHPYARYREAQRPV 487 (741)
T ss_dssp ECCCSCS-EEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE-EEC---------SSC-CCSSSTTSTTHHHHTTCCCE
T ss_pred ecccCCC-ceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe-EEE---------ecc-CcccccccchhhhhccCCCc
Confidence 8887443 44578999999999999999999999999875332 111 111 110 000 11111 12 22
Q ss_pred EeeecccccceeecCCC-eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc-hhhH-----HHHHHHHHCCcEEEEEcC
Q 003886 557 MKIPVKGVSANLTKGAQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYS-----KSLAFLSSVGYSLLIVNY 629 (789)
Q Consensus 557 ~~i~~~~~~~~~~~~~g-~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~-----~~~~~la~~Gy~V~~~d~ 629 (789)
..+ .++..+| ..++++++.|+++++.+++|+||++||+++.... ..|. ...+.|+++||.|+++|+
T Consensus 488 ~~~-------~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 560 (741)
T 2ecf_A 488 EFG-------TLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDN 560 (741)
T ss_dssp EEE-------EEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECC
T ss_pred EEE-------EEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEec
Confidence 223 4566788 9999999999876667789999999998876421 2343 467889999999999999
Q ss_pred CCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchh
Q 003886 630 RGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 709 (789)
Q Consensus 630 rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~ 709 (789)
||+++++..+.......++..+++|+.++++++.+++.+|.+||+|+|||+||++++.++.++|++|+++|+.+|+.++.
T Consensus 561 rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~ 640 (741)
T 2ecf_A 561 RGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWG 640 (741)
T ss_dssp TTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGG
T ss_pred CCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchh
Confidence 99888888877777777887889999999999999888899999999999999999999999999999999999998764
Q ss_pred hhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 710 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.+. ..+. +.++..+ .+..+.|...+|...+.++++|+||+||++|.+||++++.+++++|++
T Consensus 641 ~~~-------~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 702 (741)
T 2ecf_A 641 LYD-------SHYT--------ERYMDLP-ARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQK 702 (741)
T ss_dssp GSB-------HHHH--------HHHHCCT-GGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred hhc-------cccc--------hhhcCCc-ccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHH
Confidence 321 0111 1122222 345667778899999999999999999999999999999999998754
No 7
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=7.5e-47 Score=447.10 Aligned_cols=551 Identities=14% Similarity=0.146 Sum_probs=383.5
Q ss_pred ecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcce--ecccEEEEeCCCCCeEEEEecCCC-CC
Q 003886 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVE--MTGASAVVPSPSGSKLLVVRNPEN-ES 178 (789)
Q Consensus 102 ~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~--~~~~~~~~~SPdG~~la~~~~~~~-~~ 178 (789)
+..+|||++++|..... ++....||+.+. .+++.++|+....-.+ ...+..++|||||++|||..+..+ +.
T Consensus 73 ~~p~~dG~~~~~~~~~~----~~~~~~l~~~~~--~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~ 146 (695)
T 2bkl_A 73 STPSRRNGRFFYVRTHK----DKEKAILYWRQG--ESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADE 146 (695)
T ss_dssp CCCEEETTEEEEEEECT----TCSSCEEEEEES--TTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSC
T ss_pred CCCEEECCEEEEEEEcC----CCeEEEEEEEcC--CCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCce
Confidence 34458999999987643 234668898775 3445556654321000 013678999999999999987653 34
Q ss_pred CeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcc
Q 003886 179 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (789)
Q Consensus 179 ~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (789)
.++++++ .+++..+...+.. ..+..++|||||+.|+|++.+.....
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~---------~~~~~~~wspDg~~l~~~~~d~~~~~------------------------ 193 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEG---------GKYATPKWTPDSKGFYYEWLPTDPSI------------------------ 193 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSC---------CTTCCCEECTTSSEEEEEECCCCTTS------------------------
T ss_pred EEEEEEECCCCCCcCCcccCc---------ccccceEEecCCCEEEEEEecCCCCC------------------------
Confidence 5677777 4554321111111 11268999999999999987642110
Q ss_pred eeeCCcccccCCccCceEEEEEccCCce--EeccCCCC-CCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCC
Q 003886 258 DWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRP 334 (789)
Q Consensus 258 ~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~~-~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~ 334 (789)
..-......+|+++++.+++. +.+..... ...+..+.|||||+. |++.+.... ..
T Consensus 194 -------~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~-----------~~ 251 (695)
T 2bkl_A 194 -------KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY----LFVYILRGW-----------SE 251 (695)
T ss_dssp -------CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC----EEEEEEETT-----------TE
T ss_pred -------ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE----EEEEEeCCC-----------Cc
Confidence 000011346899999998863 23321122 235668999999999 999885431 12
Q ss_pred cceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 335 CALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 335 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
..||+++. .+++.+.|+........+.| |||+ |++.++.+ ....+|+++|+.++
T Consensus 252 ~~l~~~~~-----------------~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~-------~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 252 NDVYWKRP-----------------GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEG-------APRQRVFEVDPAKP 305 (695)
T ss_dssp EEEEEECT-----------------TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTT-------CTTCEEEEEBTTBC
T ss_pred eEEEEEcC-----------------CCCceEEeecCCCceEEEEe-cCCc-EEEEECCC-------CCCCEEEEEeCCCC
Confidence 37999886 56678888877666677777 7888 88887653 13468999998775
Q ss_pred CCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC-CCCceeE
Q 003886 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWS 493 (789)
Q Consensus 415 ~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~-~~~~~~~ 493 (789)
+.... ..++. ...+ ..+..+.|+ +..|+++...++...||.++++++..+.+... .+.....
T Consensus 306 ~~~~~----~~l~~---~~~~--------~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~ 368 (695)
T 2bkl_A 306 ARASW----KEIVP---EDSS--------ASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNL 368 (695)
T ss_dssp SGGGC----EEEEC---CCSS--------CEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCC
T ss_pred CccCC----eEEec---CCCC--------CeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEe
Confidence 43110 11111 0000 012234566 45688888889999999999876666666543 3323334
Q ss_pred EeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhccccCceeeEeeecccccceeecCCC
Q 003886 494 LLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQ 573 (789)
Q Consensus 494 ~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~g 573 (789)
.++++++.+++.++++.+|+.+|++++.+++ ...+ ... +. . +....+...++ .+++.||
T Consensus 369 ~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~-~~~l--~~~--~~-~--------~~~~~~~~~~~-------~~~~~dg 427 (695)
T 2bkl_A 369 MGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK-SELW--AKV--DV-P--------MNPEQYQVEQV-------FYASKDG 427 (695)
T ss_dssp BSCTTCSEEEEEEEETTEEEEEEEEETTTCC-EEEE--EEC--CC-S--------SCGGGEEEEEE-------EEECTTS
T ss_pred ecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEE--ecC--CC-C--------CCHHHCeEEEE-------EEECCCC
Confidence 5678999999999999999999999987653 1111 111 00 1 11112333333 5667789
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHH
Q 003886 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (789)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~ 653 (789)
.+++++++.|++++..+++|+||++|||++......|....+.|+++||+|+++|+||++++|..+.......++...++
T Consensus 428 ~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~ 507 (695)
T 2bkl_A 428 TKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFD 507 (695)
T ss_dssp CEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred CEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHH
Confidence 99999999999776678899999999998876555666666778899999999999999999999877655556666789
Q ss_pred HHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccc
Q 003886 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDS 733 (789)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (789)
|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++..+........| ...++
T Consensus 508 D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~~~g------ 579 (695)
T 2bkl_A 508 DFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTW--IPEYG------ 579 (695)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG--HHHHC------
T ss_pred HHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcch--HHHhC------
Confidence 9999999999999999999999999999999999999999999999999999987654322111111 11121
Q ss_pred cCCCCChhhHHHHHhcCccccCCCCC--CCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 734 FTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 734 ~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.....+..+.+..++|+.++.+++ +|+||+||++|.+||+.++.+++++|+.
T Consensus 580 --~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~ 633 (695)
T 2bkl_A 580 --TAEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQN 633 (695)
T ss_dssp --CTTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHT
T ss_pred --CCCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHh
Confidence 111234556778899999999877 6999999999999999999999999865
No 8
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-47 Score=453.98 Aligned_cols=565 Identities=15% Similarity=0.139 Sum_probs=376.3
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCc---cceeecCCcceecccEEEEeCCCCCeEEEEecCCCC
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS---VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENE 177 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~ 177 (789)
.+.+||||++|+|.......-.......+|++++.+ ++. .+++ ..+..++|||||++|||+++.
T Consensus 64 ~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~--g~~~~~~~l~--------~~~~~~~~SPDG~~la~~~~~--- 130 (719)
T 1z68_A 64 NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN--GEFVRGNELP--------RPIQYLCWSPVGSKLAYVYQN--- 130 (719)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCC--------SSBCCEEECSSTTCEEEEETT---
T ss_pred eEEECCCCCeEEEEecCceeEEeecceEEEEEECCC--CccccceecC--------cccccceECCCCCEEEEEECC---
Confidence 455689999999986532100111246889888633 333 3332 246789999999999999754
Q ss_pred CCeEEEEe-cCCceeEEEecCC------CccccccCCC---cccceeecCCCCEEEEEeecCCCCCCCccCC-CCCCCCC
Q 003886 178 SPIQFELW-SQSQLEKEFHVPQ------TVHGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLG-STKGGSS 246 (789)
Q Consensus 178 ~~~~~~i~-~~~~~~~~~~~~~------~~~g~v~~d~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~-~~~~~~~ 246 (789)
.++..+ .+++..+++.... +...++|.++ ....++|||||++|||.+.+.... ..+... +....
T Consensus 131 --~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~-~~~~~~~~~~~~-- 205 (719)
T 1z68_A 131 --NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDI-PVIAYSYYGDEQ-- 205 (719)
T ss_dssp --EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTS-CEEEEEECCSSS--
T ss_pred --eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCC-ceEEeeccCCCC--
Confidence 366555 4566555442211 1111222211 124899999999999998764321 111100 00000
Q ss_pred CcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceE---eccCC-----CCCCccceEEEeeCCCCCccEEEEEe-
Q 003886 247 DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ---AVKGI-----PKSLSVGQVVWAPLNEGLHQYLVFVG- 317 (789)
Q Consensus 247 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~---~l~~~-----~~~~~~~~~~wSPDg~~~~~~l~f~~- 317 (789)
. .-.....|... |. ......|++||+++++.. .+. . .....+..++|||||+ ++|..
T Consensus 206 ~----~~~~~~~yp~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~SpD~~-----~~~~~~ 271 (719)
T 1z68_A 206 Y----PRTINIPYPKA-GA---KNPVVRIFIIDTTYPAYVGPQEVP-VPAMIASSDYYFSWLTWVTDER-----VCLQWL 271 (719)
T ss_dssp S----CEEEEEECCBT-TS---CCCEEEEEEEESSCHHHHCCEECC-CCHHHHTSCEEEEEEEESSSSE-----EEEEEE
T ss_pred C----ccceeecCCCC-CC---CCCeeEEEEEECCCCCccceeEcc-CCccCCCCcceEEEeEEeCCCe-----EEEEEe
Confidence 0 00001112111 11 113358999999998752 441 1 1233567899999975 55553
Q ss_pred ecCCceeeeeeeeccCCcceEEEe----cccccchhhhhhhhcCCCCCCCeeecC-----CCCCccC-----cceecCCC
Q 003886 318 WSSETRKLGIKYCYNRPCALYAVR----VSLYKSEASELELKESSSEDLPVVNLT-----ESISSAF-----FPRFSPDG 383 (789)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~l~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~Lt-----~~~~~~~-----~p~~SpDG 383 (789)
++.. ....|+++| + .+++.+.++ .+.+.+. .|.|||||
T Consensus 272 ~~~~-----------~~~~l~~~d~~~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 272 KRVQ-----------NVSVLSICDFREDW-----------------QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp ESST-----------TEEEEEEEEECSSS-----------------SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred cccc-----------CeEEEEEEcccCCC-----------------CCCceEEEEecccccCCceEccccCCccEECCCC
Confidence 2211 123699999 6 566666665 2334444 89999999
Q ss_pred CEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEE
Q 003886 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 463 (789)
Q Consensus 384 ~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~ 463 (789)
+.|+|.+.... +..+|+++|+.++..+.++.+..++. .+.++ ||+.|+|.+.
T Consensus 324 ~~l~~~~~~~~-------g~~~l~~~~~~~~~~~~lt~~~~~v~--------------------~~~~~-d~~~i~~~~~ 375 (719)
T 1z68_A 324 ISYYKIFSDKD-------GYKHIHYIKDTVENAIQITSGKWEAI--------------------NIFRV-TQDSLFYSSN 375 (719)
T ss_dssp SCEEEEEECTT-------SCEEEEEESSCSTTCEECSCSSSCEE--------------------EEEEE-CSSEEEEEES
T ss_pred CeEEEEEEccC-------CceEEEEEECCCCceEecccCceEEE--------------------EEEEE-eCCEEEEEEe
Confidence 99998654431 35689999998876555554332211 23445 8999999987
Q ss_pred e----CCeEEEEEEECCCC--cEEEecCC----CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeec
Q 003886 464 W----GSSQVIISVNVSSG--ELLRITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLN 533 (789)
Q Consensus 464 ~----~~~~~l~~~dl~tg--~~~~lt~~----~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~ 533 (789)
. .+..+||.+++.+| +.++++.. ...+....|++|++.+++.+++++.| .++++++.+++ ...
T Consensus 376 ~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~-~~~----- 448 (719)
T 1z68_A 376 EFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQ-EIK----- 448 (719)
T ss_dssp CGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCC-EEE-----
T ss_pred cCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCC-EEE-----
Confidence 6 57789999998777 46777742 22344568999999999999999887 57788765442 111
Q ss_pred cCCCCCCCchhhhhccccCce-eeEeeecccccceeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-chhhH
Q 003886 534 VSSPISRCPEKVKSLLSSRQF-SIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS 611 (789)
Q Consensus 534 ~~~~~~~~n~~~~~~l~~~~~-~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~ 611 (789)
+...|+.+...++...+ +...+ .++..+ .+++++++.|+++++.+++|+||++||+++... ...|.
T Consensus 449 ----~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~ 516 (719)
T 1z68_A 449 ----ILEENKELENALKNIQLPKEEIK-------KLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFA 516 (719)
T ss_dssp ----EEECCHHHHHHTTSBCCCEEEEE-------EEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCC
T ss_pred ----EeecchhhhhhhccccCCceEEE-------EEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccch
Confidence 12345544334444433 22223 445556 899999999998767788999999999987643 22332
Q ss_pred -HHHHHH-HHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHH
Q 003886 612 -KSLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLI 689 (789)
Q Consensus 612 -~~~~~l-a~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~ 689 (789)
.....| +++||.|+++|+||++++|..+.......++...++|+.++++++.+++.+|.+||+|+|||+||+++++++
T Consensus 517 ~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a 596 (719)
T 1z68_A 517 VNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLAL 596 (719)
T ss_dssp CCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHH
T ss_pred hhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHH
Confidence 233444 479999999999999998888877777778878899999999999998889999999999999999999999
Q ss_pred HhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCC-hhhHHHHHhcCccccCCCCCC-CEEEEEe
Q 003886 690 GQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPS-VEDLTRFHSKSPISHISKVKT-PTIFLLG 767 (789)
Q Consensus 690 ~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~-P~Lii~G 767 (789)
.++|++|+++|+.+|+.++..+. ..+.+ .+++.+. .+..+.|...+|..++.++++ |+||+||
T Consensus 597 ~~~p~~~~~~v~~~~~~~~~~~~-------~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G 661 (719)
T 1z68_A 597 ASGTGLFKCGIAVAPVSSWEYYA-------SVYTE--------RFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHG 661 (719)
T ss_dssp TTSSSCCSEEEEESCCCCTTTSB-------HHHHH--------HHHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEE
T ss_pred HhCCCceEEEEEcCCccChHHhc-------cccch--------hhcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEe
Confidence 99999999999999998764321 11111 1112221 244566778889889999998 8999999
Q ss_pred CCCCCCChHHHHHHHHHCCC
Q 003886 768 AQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 768 ~~D~~vp~~~~~~l~~~l~~ 787 (789)
++|.+||++++.+++++|++
T Consensus 662 ~~D~~v~~~~~~~~~~~l~~ 681 (719)
T 1z68_A 662 TADDNVHFQNSAQIAKALVN 681 (719)
T ss_dssp TTCSSSCTHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999998753
No 9
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=4.3e-46 Score=443.69 Aligned_cols=549 Identities=14% Similarity=0.112 Sum_probs=378.7
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeec-CCCCccceeecC-Cccee-cccEEEEeCCCCCeEEEEecCCC-
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISK-ENENSVTFQWAP-FPVEM-TGASAVVPSPSGSKLLVVRNPEN- 176 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~lt~~~-~~~~~-~~~~~~~~SPdG~~la~~~~~~~- 176 (789)
.+..+|||++++|..... ++....||+.+... ++++.++|.... +.... ..+..++|||||++|||..+.++
T Consensus 111 ~~~p~pdG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~ 186 (741)
T 1yr2_A 111 FGLPQRRGASVFYSWNSG----LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS 186 (741)
T ss_dssp ECCCEEETTEEEEEEECS----SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC
T ss_pred cCCCEEECCEEEEEEEcC----CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC
Confidence 344459999999987643 23457889877531 033444443221 11000 14678999999999999987642
Q ss_pred CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCC
Q 003886 177 ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (789)
Q Consensus 177 ~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (789)
+..++++++ .+|+..+....... +..++|||| +.|+|++.+.....
T Consensus 187 e~~~i~v~dl~tg~~~~~~~~~~~----------~~~~~wspD-~~l~~~~~~~~~~~---------------------- 233 (741)
T 1yr2_A 187 DWRTVKFVGVADGKPLADELKWVK----------FSGLAWLGN-DALLYSRFAEPKEG---------------------- 233 (741)
T ss_dssp SEEEEEEEETTTCCEEEEEEEEEE----------SCCCEESTT-SEEEEEECCCC-------------------------
T ss_pred ceEEEEEEECCCCCCCCccCCCce----------eccEEEECC-CEEEEEEecCcccc----------------------
Confidence 224677777 56655443211111 257999999 99999876542100
Q ss_pred cceeeCCcccccCCccCceEEEEEccCCce--EeccCCCC-CCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeecc
Q 003886 256 QGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYN 332 (789)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~~-~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~ 332 (789)
++.........|+++++.++.. +.+...+. ......+.|||||+. |+|.+.+...
T Consensus 234 --------~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~~---------- 291 (741)
T 1yr2_A 234 --------QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW----VVITSSEGTD---------- 291 (741)
T ss_dssp -------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECTTC----------
T ss_pred --------cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE----EEEEEEccCC----------
Confidence 0000011246799999988763 23311121 123568999999999 9998854311
Q ss_pred CCcceEEEecccccchhhhhhhhcCCCCCC--C-eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEe
Q 003886 333 RPCALYAVRVSLYKSEASELELKESSSEDL--P-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (789)
Q Consensus 333 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~-~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~ 409 (789)
....||++|+ +++ + .+.|+........+ ++|||++|+|.++.+. ...+|+++
T Consensus 292 ~~~~l~~~d~-----------------~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~-------~~~~l~~~ 346 (741)
T 1yr2_A 292 PVNTVHVARV-----------------TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGA-------PLKKIVRV 346 (741)
T ss_dssp SCCEEEEEEE-----------------ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTC-------TTCEEEEE
T ss_pred CcceEEEEEC-----------------CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCC-------CCCEEEEE
Confidence 2347999998 444 5 67777665545555 5699999999997641 34689999
Q ss_pred ecCCCC--CCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC-
Q 003886 410 DWPTNG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA- 486 (789)
Q Consensus 410 d~~~~~--~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~- 486 (789)
|+.++. .+.++..... .+..+.|+ ++.|+++...++...||.++++++..+.++..
T Consensus 347 d~~~~~~~~~~l~~~~~~-------------------~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~ 405 (741)
T 1yr2_A 347 DLSGSTPRFDTVVPESKD-------------------NLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG 405 (741)
T ss_dssp ECSSSSCEEEEEECCCSS-------------------EEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSS
T ss_pred eCCCCccccEEEecCCCC-------------------eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCC
Confidence 987642 1111111100 11233454 55798998999999999999876667777643
Q ss_pred CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhccccCceeeEeeecccccc
Q 003886 487 ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSA 566 (789)
Q Consensus 487 ~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~i~~~~~~~ 566 (789)
.+......++++++.++++++++.+|+.+|++++.+++ .++ +..+... +....+...++
T Consensus 406 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~--~~~----l~~~~~~--------~~~~~~~~~~~------- 464 (741)
T 1yr2_A 406 IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK--TTP----WEPVHLT--------FDPADFRVEQV------- 464 (741)
T ss_dssp SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE--EEE----CSCCCCS--------SCGGGEEEEEE-------
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc--EEE----EecCCCC--------CChhHCEEEEE-------
Confidence 33334456778999999999999999999999986543 111 1111001 12222333343
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~ 646 (789)
.+++.||..++++++.|++. .++.|+||++|||++......|....+.|+++||+|+++|+||++++|..+.......
T Consensus 465 ~~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 542 (741)
T 1yr2_A 465 FYPSKDGTKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRD 542 (741)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EEEcCCCCEEEEEEEecCCC--CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhh
Confidence 56677899999999999854 5689999999999887665667677778999999999999999999999887765555
Q ss_pred CCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhc
Q 003886 647 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 726 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~ 726 (789)
++...++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++..+........| ...+
T Consensus 543 ~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~~~ 620 (741)
T 1yr2_A 543 KKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYW--VDDY 620 (741)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGG--HHHH
T ss_pred cCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchh--HHHc
Confidence 55667899999999999999899999999999999999999999999999999999999987654322111111 1111
Q ss_pred cCccccccCCCCChhhHHHHHhcCccccCCC-CCC-CEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 727 GSKGKDSFTESPSVEDLTRFHSKSPISHISK-VKT-PTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-i~~-P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
+ .....+..+.+...+|+.++.+ +++ |+||+||++|.+||+.++.+++++|+.
T Consensus 621 g--------~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~ 675 (741)
T 1yr2_A 621 G--------YPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQT 675 (741)
T ss_dssp C--------CTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHH
T ss_pred C--------CCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhh
Confidence 1 1112355667788999999997 885 999999999999999999999998864
No 10
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=2.4e-46 Score=444.37 Aligned_cols=553 Identities=16% Similarity=0.207 Sum_probs=375.2
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (789)
...+||| ++++|..+ ..++++++. +++.++++... ..+..++|||||++|||+.+. +
T Consensus 86 ~~~~spd-~~~~~~~~----------~~i~~~d~~--~~~~~~l~~~~-----~~~~~~~~SpdG~~la~~~~~-----~ 142 (706)
T 2z3z_A 86 RTLDAGR-GLVVLFTQ----------GGLVGFDML--ARKVTYLFDTN-----EETASLDFSPVGDRVAYVRNH-----N 142 (706)
T ss_dssp EEEETTT-TEEEEEET----------TEEEEEETT--TTEEEEEECCT-----TCCTTCEECTTSSEEEEEETT-----E
T ss_pred eEEECCC-CeEEEEEC----------CEEEEEECC--CCceEEccCCc-----ccccCCcCCCCCCEEEEEECC-----e
Confidence 3345799 78888742 478888763 33445554433 346778999999999998653 4
Q ss_pred EEEEe-cC-----CceeEEEecCCC-c-ccc-ccCCC--cccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcC
Q 003886 181 QFELW-SQ-----SQLEKEFHVPQT-V-HGS-VYADG--WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 249 (789)
Q Consensus 181 ~~~i~-~~-----~~~~~~~~~~~~-~-~g~-v~~d~--~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (789)
++..+ .+ ++..+++..... + .|. +|.++ ....++|||||++|+|.+.+..... .+.............
T Consensus 143 i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~-~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK-PTPIVDYHPLEAESK 221 (706)
T ss_dssp EEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC-CEEEEECCSSSCEEE
T ss_pred EEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc-eEEeeccCCCCCceE
Confidence 66665 45 555554433211 0 000 11111 1368999999999999985543211 111000000000000
Q ss_pred CCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCC-CCCCccceEEEeeCCCCCccEEEEEeecCCceeeeee
Q 003886 250 CNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK 328 (789)
Q Consensus 250 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~-~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~ 328 (789)
...|.. .|. ......|++||+++++.+.+... .....+..++|||||+. |++.+.....
T Consensus 222 ------~~~y~~-~g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~~~~~------ 281 (706)
T 2z3z_A 222 ------PLYYPM-AGT---PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI----LYVAEVNRAQ------ 281 (706)
T ss_dssp ------EECCCB-TTS---CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE----EEEEEECTTS------
T ss_pred ------EeeCCC-CCC---CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE----EEEEEeCCCC------
Confidence 000100 011 12346899999999988777311 22345678999999998 8887643211
Q ss_pred eeccCCcceEEEecccccchhhhhhhhcCCCCCC-CeeecCCC--CC---ccCcceecC--CCCEEEEEecCCCCCCCCc
Q 003886 329 YCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTES--IS---SAFFPRFSP--DGKFLVFLSAKSSVDSGAH 400 (789)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~--~~---~~~~p~~Sp--DG~~la~~s~~~~~~~g~~ 400 (789)
....|+++|+ .++ ..+.+... .. ....++||| ||+.| +.+.++
T Consensus 282 ----~~~~v~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l-~~~~~~------- 332 (706)
T 2z3z_A 282 ----NECKVNAYDA-----------------ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI-WQSRRD------- 332 (706)
T ss_dssp ----CEEEEEEEET-----------------TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE-EEECTT-------
T ss_pred ----CeeEEEEEEC-----------------CCCceeeEEEEccCCCeECccCCceeecCCCCEEE-EEEccC-------
Confidence 2237999998 555 44444321 11 135789999 99855 555443
Q ss_pred cccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCC-CccccCCCEEEEEEEeCC--eEEEEEEECCC
Q 003886 401 SATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGS--SQVIISVNVSS 477 (789)
Q Consensus 401 ~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~-~~ws~Dg~~l~~~~~~~~--~~~l~~~dl~t 477 (789)
+..+||.+|..++..+.++.+... +.. +.|+|||+.|++.+...+ ...||.+|+.+
T Consensus 333 -g~~~l~~~~~~~~~~~~l~~~~~~--------------------v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 333 -GWNHLYLYDTTGRLIRQVTKGEWE--------------------VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp -SSCEEEEEETTSCEEEECCCSSSC--------------------EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred -CccEEEEEECCCCEEEecCCCCeE--------------------EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 346788888655443334332211 112 479999999999887654 57899999999
Q ss_pred CcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhccccCcee-e
Q 003886 478 GELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFS-I 556 (789)
Q Consensus 478 g~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~ 556 (789)
++.++++.... +....|++||+.+++.++++..|+.+++.++.+++ ..+ ++..++ +....+. .
T Consensus 392 ~~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~--~~~--------~~~~~~-----~~~~~~~~~ 455 (706)
T 2z3z_A 392 GKTKDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS--HTL--------LEAKNP-----DTGYAMPEI 455 (706)
T ss_dssp CCCEESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE--EEE--------EECC-----------CCCCE
T ss_pred CCceeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe--Eee--------ccccch-----hhhcCCCCc
Confidence 99888885443 45578999999999999999999999999976542 111 111111 1111111 1
Q ss_pred EeeecccccceeecCCC-eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc-hhhHH----HHHHHHHCCcEEEEEcCC
Q 003886 557 MKIPVKGVSANLTKGAQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSK----SLAFLSSVGYSLLIVNYR 630 (789)
Q Consensus 557 ~~i~~~~~~~~~~~~~g-~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~~----~~~~la~~Gy~V~~~d~r 630 (789)
..+ .+...+| ..++++++.|+++++.+++|+||++|||+++... ..|.. ..+.|+++||.|+++|+|
T Consensus 456 ~~~-------~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~r 528 (706)
T 2z3z_A 456 RTG-------TIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSR 528 (706)
T ss_dssp EEE-------EEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCT
T ss_pred EEE-------EEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecC
Confidence 111 4556688 8999999999987777889999999999886532 34543 577899999999999999
Q ss_pred CCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhh
Q 003886 631 GSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (789)
Q Consensus 631 Gs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~ 710 (789)
|+++++..+.......++..+++|+.++++++.+++.+|.+|++|+|||+||+++++++.++|++|+++|+.+|+.++..
T Consensus 529 G~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 608 (706)
T 2z3z_A 529 GSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNR 608 (706)
T ss_dssp TCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGG
T ss_pred CCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHH
Confidence 99888888877777788888899999999999988888999999999999999999999999999999999999987643
Q ss_pred hhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 711 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
+. ..+. +++++.+ .+..+.|...+|...+.++++|+|++||++|.+||++++.+++++|+
T Consensus 609 ~~-------~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~ 668 (706)
T 2z3z_A 609 YA-------IMYG--------ERYFDAP-QENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACV 668 (706)
T ss_dssp SB-------HHHH--------HHHHCCT-TTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHH
T ss_pred HH-------hhhh--------hhhcCCc-ccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHH
Confidence 21 0111 1222222 24456677889999999999999999999999999999999999875
No 11
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=1.5e-45 Score=435.07 Aligned_cols=500 Identities=15% Similarity=0.148 Sum_probs=362.1
Q ss_pred cEEEEeCCCCCeEEEEecCCC-CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~-~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
+..++|||||++|||..+..+ +...+++++ .+|+..+.. ..... +..++|| ||+.|+|++.+.....
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k---------~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVK---------FSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEE---------SCCCEEE-TTTEEEEEESSCCC--
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCce---------eccEEEe-CCCEEEEEEecCcccc
Confidence 567899999999999887653 235666666 566654432 11110 1678999 9999999987642100
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCce--EeccCCCC--CCccceEEEeeCCCCC
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK--SLSVGQVVWAPLNEGL 309 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~~--~~~~~~~~wSPDg~~~ 309 (789)
+.........||++++.++.. +.+...+. +.....+.|||||+.
T Consensus 200 -------------------------------~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~- 247 (693)
T 3iuj_A 200 -------------------------------ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRF- 247 (693)
T ss_dssp ------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCE-
T ss_pred -------------------------------cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCE-
Confidence 000001346799999987653 33321122 223457899999999
Q ss_pred ccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC--CeeecCCCCCccCcceecCCCCEEE
Q 003886 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTESISSAFFPRFSPDGKFLV 387 (789)
Q Consensus 310 ~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~Lt~~~~~~~~p~~SpDG~~la 387 (789)
|++.+.... ....||++|+ +++ +.++|+........+ |++||++|+
T Consensus 248 ---l~~~~~~~~-----------~~~~i~~~d~-----------------~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~ 295 (693)
T 3iuj_A 248 ---LLISAANST-----------SGNRLYVKDL-----------------SQENAPLLTVQGDLDADVSL-VDNKGSTLY 295 (693)
T ss_dssp ---EEEEEESSS-----------SCCEEEEEET-----------------TSTTCCCEEEECSSSSCEEE-EEEETTEEE
T ss_pred ---EEEEEccCC-----------CCcEEEEEEC-----------------CCCCCceEEEeCCCCceEEE-EeccCCEEE
Confidence 998874332 2248999998 333 677787765555555 899999999
Q ss_pred EEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCe
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 467 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~ 467 (789)
|.++++. ...+|+++|+.+++.... ..+++ .. + ... .|+++++.|++....++.
T Consensus 296 ~~t~~~~-------~~~~l~~~d~~~~~~~~~----~~l~~---~~--~--------~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 296 LLTNRDA-------PNRRLVTVDAANPGPAHW----RDLIP---ER--Q--------QVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp EEECTTC-------TTCEEEEEETTSCCGGGC----EEEEC---CC--S--------SCE--EEEEETTEEEEEEEETTE
T ss_pred EEECCCC-------CCCEEEEEeCCCCCcccc----EEEec---CC--C--------CEE--EEEEECCEEEEEEEECCe
Confidence 9998752 346899999987554211 11211 00 0 111 799999999999999999
Q ss_pred EEEEEEECCCCcEEEecCCC-CCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhh
Q 003886 468 QVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVK 546 (789)
Q Consensus 468 ~~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 546 (789)
..|+.++++++..+.+.... +......++++++.+++..+++++|+.+|.+++.+++ ...+ . ..+.
T Consensus 350 ~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~-~~~l--~-------~~~~--- 416 (693)
T 3iuj_A 350 ARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA-ISLY--R-------ASAA--- 416 (693)
T ss_dssp EEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC-EEEE--E-------CCCS---
T ss_pred eEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe-EEEE--E-------eCCC---
Confidence 99999999888888776443 2233334567899999999999999999999986543 1111 1 1111
Q ss_pred hccccCceeeEeeecccccceeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEE
Q 003886 547 SLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLI 626 (789)
Q Consensus 547 ~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~ 626 (789)
.+....+...++ .+++.||.+++++++.|++++..++.|+||++|||++......|....+.|+++||+|++
T Consensus 417 -~~~~~~~~~~~~-------~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~ 488 (693)
T 3iuj_A 417 -PFKPEDYVSEQR-------FYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAV 488 (693)
T ss_dssp -SCCGGGEEEEEE-------EEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEE
T ss_pred -CcChhhCeeEEE-------EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEE
Confidence 122222334444 566779999999999999776678899999999998876666777777899999999999
Q ss_pred EcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 627 VNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 627 ~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
+|+||++++|..+........+...++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.
T Consensus 489 ~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~ 568 (693)
T 3iuj_A 489 ANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVL 568 (693)
T ss_dssp ECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCC
T ss_pred EeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcc
Confidence 99999999999998876666666778999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhcCCCCCcchhhhhccCccccccCCCCChhh-HHHHHhcCccccCCC-CCCC-EEEEEeCCCCCCChHHHHHHHH
Q 003886 707 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED-LTRFHSKSPISHISK-VKTP-TIFLLGAQDLRVPVSNGLQVIY 783 (789)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sp~~~~~~-i~~P-~Lii~G~~D~~vp~~~~~~l~~ 783 (789)
++..+........|. ..++ .....+. .+.+..+||+.++.+ +++| +||+||++|.+||+.++.++++
T Consensus 569 d~~~~~~~~~~~~~~--~~~g--------~p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~ 638 (693)
T 3iuj_A 569 DMLRYHTFTAGTGWA--YDYG--------TSADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAA 638 (693)
T ss_dssp CTTTGGGSGGGGGCH--HHHC--------CTTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHH
T ss_pred hhhhhccCCCchhHH--HHcC--------CccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHH
Confidence 876553211111111 1111 1112233 556778999999999 8998 9999999999999999999999
Q ss_pred HCCC
Q 003886 784 HIPF 787 (789)
Q Consensus 784 ~l~~ 787 (789)
+|+.
T Consensus 639 ~l~~ 642 (693)
T 3iuj_A 639 TLQA 642 (693)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9864
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=8.5e-45 Score=430.97 Aligned_cols=559 Identities=14% Similarity=0.111 Sum_probs=379.9
Q ss_pred HHHHHHhhcCccccceEEEecCCCCCceEEEEEeechhhcccceeEEEEEEeec-CCC--C-ccceeecCCcc--eeccc
Q 003886 83 SKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISK-ENE--N-SVTFQWAPFPV--EMTGA 156 (789)
Q Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~-~~~--~-~~~lt~~~~~~--~~~~~ 156 (789)
.+|+++++..-.... .+...++|.++.|.... .++....++..+... .++ . .+.+....+.. +....
T Consensus 104 ~~l~~e~~~~~~~~~---~~~p~~~g~~~yy~~~~----~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~ 176 (751)
T 2xe4_A 104 DDIYAEHISHINEDD---MSAPYVYGKYRYYTREV----KGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDV 176 (751)
T ss_dssp HHHHHHHHHTSCSSE---ECCCEEETTEEEEEEEC----TTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEE
T ss_pred HHHHHHHHHhccccc---CCCCeEECCEEEEEEEC----CCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEE
Confidence 456677765544333 22223689999897653 223344566654310 222 2 22222111100 00135
Q ss_pred EEEEeC-CCCCeEEEEecCCC-CCCeEEEEe-cCC-ceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 157 SAVVPS-PSGSKLLVVRNPEN-ESPIQFELW-SQS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 157 ~~~~~S-PdG~~la~~~~~~~-~~~~~~~i~-~~~-~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
..++|| |||++|||+.+..+ +..++++++ .++ +.. ..... ..+.+++|||||+.|+|++.+...
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-----~~~~~------~~~~~~~WspDg~~l~y~~~d~~~- 244 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI-----ADKVS------GTNGEIVWGPDHTSLFYVTKDETL- 244 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC-----CCCEE------EECSCCEECSSTTEEEEEEECTTC-
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC-----Ccccc------CceeeEEEecCCCEEEEEEECCCC-
Confidence 689999 99999999987653 234588877 455 411 11110 012689999999999999764310
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCce--EeccCCCCCCccceEEEeeCCCCCc
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
...+||++++.++.. +.+...+.......+.|||||+.
T Consensus 245 --------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~-- 284 (751)
T 2xe4_A 245 --------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT-- 284 (751)
T ss_dssp --------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE--
T ss_pred --------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE--
Confidence 125899999988753 22311122223457899999999
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC--Ce--eecCCCCCccCcceecCC---C
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PV--VNLTESISSAFFPRFSPD---G 383 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~--~~Lt~~~~~~~~p~~SpD---G 383 (789)
|+|.++.. ....||++|+ +++ +. +.|+... ..+.|||| |
T Consensus 285 --l~~~~~~~------------~~~~l~~~d~-----------------~~~~~~~~~~~l~~~~---~~~~~s~~~~~g 330 (751)
T 2xe4_A 285 --LCIGSQSP------------ETAEVHLLDL-----------------RKGNAHNTLEIVRPRE---KGVRYDVQMHGT 330 (751)
T ss_dssp --EEEEEECS------------SCEEEEEEES-----------------SSCTTCCCEEESSCCC---TTCCEEEEEETT
T ss_pred --EEEEecCC------------CCceEEEEEC-----------------CCCCCCceeEEeecCC---CCceEEEeeeeC
Confidence 99988533 2347999998 332 45 6676543 35667777 9
Q ss_pred CEEEEEecCCCCCCCCccccceeEEeecCCC-CCCC-cccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEE
Q 003886 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 461 (789)
Q Consensus 384 ~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~-~~~~-~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~ 461 (789)
+.|+|.++++. ....+|+++|+.+. ..+. +.....++ .+. .|+.+++.|++.
T Consensus 331 ~~l~~~t~~~~------a~~~~L~~~d~~~~~~~~~~li~~~~~~------------------~l~--~~~~~~~~lv~~ 384 (751)
T 2xe4_A 331 SHLVILTNEGG------AVNHKLLIAPRGQPSDWSHVLVDHSEDV------------------FME--SIAVRSNYLVVA 384 (751)
T ss_dssp TEEEEEECTTT------CTTCEEEEEETTSTTCCCCEEECCCSSE------------------EEE--EEEECSSEEEEE
T ss_pred CEEEEEeCCCC------CCCcEEEEEcCCCcccceeeEECCCCCc------------------EEE--EEEEECCEEEEE
Confidence 99999998750 13568999998752 3222 21111110 011 245567789999
Q ss_pred EEeCCeEEEEEEEC-------CCCc-EEEecCCCCCceeEEe------eecCCEEEEEEeCCCCCCeEEEEeecccCCCc
Q 003886 462 SIWGSSQVIISVNV-------SSGE-LLRITPAESNFSWSLL------TLDGDNIIAVSSSPVDVPQVKYGYFVDKANKG 527 (789)
Q Consensus 462 ~~~~~~~~l~~~dl-------~tg~-~~~lt~~~~~~~~~~~------s~dg~~l~~~~ss~~~p~~i~~~~~~~~~~~~ 527 (789)
...++...|+.+++ ++|+ .++|+.....+ ...+ +.+++.++++++++++|+.+|.+++.+++ ..
T Consensus 385 ~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~-~~ 462 (751)
T 2xe4_A 385 GRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIF-TVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS-RT 462 (751)
T ss_dssp EEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSC-EEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC-EE
T ss_pred EEeCCEEEEEEEecccccccccCCccceEECCCCcee-EEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc-EE
Confidence 99999999999996 6777 78885443222 2234 45788999999999999999999986543 11
Q ss_pred eeeeeccCCCCCCCchhhhhccccCceeeEeeecccccceeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc
Q 003886 528 TWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL 607 (789)
Q Consensus 528 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~ 607 (789)
.+ ... +.. ..+....+....+ .+++.||..++++++.|++++..+++|+||++|||++....
T Consensus 463 ~l--~~~--~~~-------~~~~~~~~~~~~~-------~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~ 524 (751)
T 2xe4_A 463 AV--KVR--EVG-------GGFDAANYKVERR-------FATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMD 524 (751)
T ss_dssp EE--EEC--CCC-------TTCCGGGEEEEEE-------EEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCC
T ss_pred EE--ecc--ccc-------cCCCccceEEEEE-------EEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCC
Confidence 11 111 000 0122222333333 56777999999999999877667789999999999887655
Q ss_pred hhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhc-cCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHH
Q 003886 608 SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTT 686 (789)
Q Consensus 608 ~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~-~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~ 686 (789)
..|....+.|+++||+|+++|+||++++|..+.. .....++...++|+.+++++|++++++|++||+|+|+|+||++++
T Consensus 525 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~ 604 (751)
T 2xe4_A 525 PQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMG 604 (751)
T ss_dssp CCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHH
T ss_pred CcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHH
Confidence 5666667789999999999999999999999887 655566667899999999999999989999999999999999999
Q ss_pred HHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCC-EEEE
Q 003886 687 HLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIFL 765 (789)
Q Consensus 687 ~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~Lii 765 (789)
+++.++|++|+|+|+.+|+.++..++.....+.+. ..+ ..+......+..+.+...||+.++.++++| +||+
T Consensus 605 ~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--~~~-----~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii 677 (751)
T 2xe4_A 605 AVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTT--GEW-----EEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQ 677 (751)
T ss_dssp HHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHH--HHT-----TTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEE
T ss_pred HHHHhCchheeEEEEeCCcchHHhhhcccCcccch--hhH-----HHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEE
Confidence 99999999999999999999987765433332211 011 111111122344567788999999999997 9999
Q ss_pred EeCCCCCCChHHHHHHHHHCCC
Q 003886 766 LGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 766 ~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
||++|.+||+.++.+++++|++
T Consensus 678 ~G~~D~~vp~~~~~~~~~~L~~ 699 (751)
T 2xe4_A 678 CGLHDPRVAYWEPAKWVSKLRE 699 (751)
T ss_dssp EETTCSSSCTHHHHHHHHHHHH
T ss_pred eeCCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999998863
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=1.3e-35 Score=343.72 Aligned_cols=307 Identities=15% Similarity=0.183 Sum_probs=241.2
Q ss_pred CCCccccCCCEEEEEEEeCCeEEEEEEECCCCc--EEE-ecCC-CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 447 LSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLR-ITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 447 ~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~--~~~-lt~~-~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
..+.|..| .|+++...++...|+++++.+|+ .+. +... .+.+.....+++++.+++..+++.+|+.+|.+++.
T Consensus 353 ~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~- 429 (711)
T 4hvt_A 353 NFISTTKD--RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT- 429 (711)
T ss_dssp EEEEECSS--CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-
T ss_pred EEEEEECC--EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-
Confidence 35567655 58888888999999999987774 444 4332 23344445567888999999999999999999976
Q ss_pred cCCCceeeeeccCCCCCCCchhhhhccccCceeeEeeecccccceeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCC
Q 003886 523 KANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP 602 (789)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~ 602 (789)
++ ...+ ...+. .+....+...++ .+++.||.+++++++.|++.+..+++|+||++|||+
T Consensus 430 ~~-~~~l---------~~~~~----~~~~~~~~~e~v-------~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~ 488 (711)
T 4hvt_A 430 HE-LKII---------RKALY----SFDSENYVLEQK-------EATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGF 488 (711)
T ss_dssp SC-EEEE---------ECCSS----CCCGGGEEEEEE-------EEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCT
T ss_pred Cc-EEEE---------ecCCc----ccCcccCeeEEE-------EEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCC
Confidence 32 1111 11121 122233344444 567789999999999999876778999999999999
Q ss_pred CCCCchhhHHHH-HHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCcc
Q 003886 603 HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHG 681 (789)
Q Consensus 603 ~~~~~~~~~~~~-~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~G 681 (789)
+......|.... +.|+++||+|+++|+||++|+|..+.......++...++|+.+++++|++++.+|++||+|+|+|+|
T Consensus 489 ~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~G 568 (711)
T 4hvt_A 489 QVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNG 568 (711)
T ss_dssp TCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHH
T ss_pred CCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHH
Confidence 877666666555 5899999999999999999999999888887888888999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCC-
Q 003886 682 GFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKT- 760 (789)
Q Consensus 682 G~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~- 760 (789)
|+++++++.++|++|+|+|+.+|+.++..+........|. ..++ .....+..+.+..+||+.++.++++
T Consensus 569 G~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~--~~~G--------~p~~~~~~~~l~~~SP~~~v~~i~~~ 638 (711)
T 4hvt_A 569 GLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWV--TEYG--------DPEIPNDLLHIKKYAPLENLSLTQKY 638 (711)
T ss_dssp HHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGH--HHHC--------CTTSHHHHHHHHHHCGGGSCCTTSCC
T ss_pred HHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHH--HHhC--------CCcCHHHHHHHHHcCHHHHHhhcCCC
Confidence 9999999999999999999999999986654332222221 1122 1222345677889999999999987
Q ss_pred -CEEEEEeCCCCCCChHHHHHHHHHC-CC
Q 003886 761 -PTIFLLGAQDLRVPVSNGLQVIYHI-PF 787 (789)
Q Consensus 761 -P~Lii~G~~D~~vp~~~~~~l~~~l-~~ 787 (789)
|+||+||++|.+||+.++.+++++| +.
T Consensus 639 pPvLii~G~~D~~Vp~~~s~~~~~aL~~~ 667 (711)
T 4hvt_A 639 PTVLITDSVLDQRVHPWHGRIFEYVLAQN 667 (711)
T ss_dssp CEEEEEEETTCCSSCTHHHHHHHHHHTTC
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999 64
No 14
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=2.5e-22 Score=221.69 Aligned_cols=267 Identities=16% Similarity=0.190 Sum_probs=197.2
Q ss_pred CCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe
Q 003886 106 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW 185 (789)
Q Consensus 106 pdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~ 185 (789)
+.+.+++|..... .+...+.|++++++ +...+.++... ..+..++|||||++|||++..+ +...++..+
T Consensus 141 ~~~~~l~~~s~~~---~~~~~~~i~i~d~~--g~~~~~l~~~~-----~~v~~~~~Spdg~~la~~s~~~-~~~~i~~~d 209 (415)
T 2hqs_A 141 AFRTRIAYVVQTN---GGQFPYELRVSDYD--GYNQFVVHRSP-----QPLMSPAWSPDGSKLAYVTFES-GRSALVIQT 209 (415)
T ss_dssp CTTCEEEEEEECS---SSSCCEEEEEEETT--SCSCEEEEEES-----SCEEEEEECTTSSEEEEEECTT-SSCEEEEEE
T ss_pred cCCCEEEEEEecC---CCCccceEEEEcCC--CCCCEEEeCCC-----CcceeeEEcCCCCEEEEEEecC-CCcEEEEEE
Confidence 4567888876542 12223789998873 44556666544 4588999999999999998654 344566555
Q ss_pred -cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcc
Q 003886 186 -SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWG 264 (789)
Q Consensus 186 -~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g 264 (789)
.+++..++......+ ..++|||||++|+|+....
T Consensus 210 ~~tg~~~~l~~~~~~~----------~~~~~spdg~~la~~~~~~----------------------------------- 244 (415)
T 2hqs_A 210 LANGAVRQVASFPRHN----------GAPAFSPDGSKLAFALSKT----------------------------------- 244 (415)
T ss_dssp TTTCCEEEEECCSSCE----------EEEEECTTSSEEEEEECTT-----------------------------------
T ss_pred CCCCcEEEeecCCCcc----------cCEEEcCCCCEEEEEEecC-----------------------------------
Confidence 456665554433222 7899999999999976532
Q ss_pred cccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEeccc
Q 003886 265 ETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 344 (789)
Q Consensus 265 ~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 344 (789)
+...|++||+.+++.+.+ ......+..+.|||||+. |+|.+.+. ....||++|+
T Consensus 245 ------g~~~i~~~d~~~~~~~~l--~~~~~~~~~~~~spdg~~----l~~~s~~~------------g~~~i~~~d~-- 298 (415)
T 2hqs_A 245 ------GSLNLYVMDLASGQIRQV--TDGRSNNTEPTWFPDSQN----LAFTSDQA------------GRPQVYKVNI-- 298 (415)
T ss_dssp ------SSCEEEEEETTTCCEEEC--CCCSSCEEEEEECTTSSE----EEEEECTT------------SSCEEEEEET--
T ss_pred ------CCceEEEEECCCCCEEeC--cCCCCcccceEECCCCCE----EEEEECCC------------CCcEEEEEEC--
Confidence 346899999999998888 444556778999999999 99988432 1237999998
Q ss_pred ccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCccccee
Q 003886 345 YKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 424 (789)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~ 424 (789)
.+++.++++.+......++|||||++|++.+... +...|++||+.+++.+.++...
T Consensus 299 ---------------~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~--------g~~~i~~~d~~~~~~~~l~~~~- 354 (415)
T 2hqs_A 299 ---------------NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG--------GQQHIAKQDLATGGVQVLSSTF- 354 (415)
T ss_dssp ---------------TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS--------SCEEEEEEETTTCCEEECCCSS-
T ss_pred ---------------CCCCEEEEecCCCcccCeEECCCCCEEEEEECcC--------CceEEEEEECCCCCEEEecCCC-
Confidence 6777778877766778899999999999988653 2457999999886654332211
Q ss_pred eEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeec
Q 003886 425 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 498 (789)
Q Consensus 425 ~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~d 498 (789)
.+..+.|+|||+.|++.+...+...||.+|++++..++++...+.+..+.|+|.
T Consensus 355 --------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 355 --------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp --------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred --------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence 133568999999999998888888999999998888898877666666677764
No 15
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=4.5e-23 Score=225.29 Aligned_cols=321 Identities=14% Similarity=0.144 Sum_probs=210.2
Q ss_pred ecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003886 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (789)
Q Consensus 102 ~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (789)
+.+||||++|+|.... ....+||++++ .+++.++++.... .....+.|||||++|+|++... .+
T Consensus 41 ~~~SpDg~~l~~~~~~------~g~~~l~~~d~--~~g~~~~lt~~~~----~~~~~~~~spdg~~l~~~~~~~----~l 104 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAF------DGPWNYYLLDL--NTQVATQLTEGRG----DNTFGGFLSPDDDALFYVKDGR----NL 104 (388)
T ss_dssp CCBCTTSCEEEEEECT------TSSCEEEEEET--TTCEEEECCCSSC----BCSSSCEECTTSSEEEEEETTT----EE
T ss_pred ccCCCCCCEEEEEEcC------CCCceEEEEeC--CCCceEEeeeCCC----CCccceEEcCCCCEEEEEeCCC----eE
Confidence 6789999999998642 13457999876 4456667765441 1233678999999999998643 57
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccce--eecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcce
Q 003886 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGI--SWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (789)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~--~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (789)
+.++ .+++.+.++..+... .... .++|||+.|+..........+. ..|. .
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~---------~~~~~~~~~~dg~~l~~~~~~~~~~~~~---------------~~~~---~ 157 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEW---------VGYGTWVANSDCTKLVGIEIRREDWVPL---------------TDWK---K 157 (388)
T ss_dssp EEEETTTCCEEEEEECCTTE---------EEEEEEEECTTSSEEEEEEEEGGGCCCC---------------CSHH---H
T ss_pred EEEECCCCcceeeeechhhc---------ccccceeECCCCCeeccccccCcccccc---------------cccc---h
Confidence 7777 566766666654332 1223 3499999998764332110000 0000 0
Q ss_pred eeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEee-CCCCCccEEEEEeecCCceeeeeeeeccCCcce
Q 003886 259 WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (789)
Q Consensus 259 ~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP-Dg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l 337 (789)
| .+.+.......|+++|+++|+.+.+ +.....+..+.||| ||+. |+|++.... ......|
T Consensus 158 ~----~~~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~~~~~l 218 (388)
T 3pe7_A 158 F----HEFYFTKPCCRLMRVDLKTGESTVI--LQENQWLGHPIYRPYDDST----VAFCHEGPH---------DLVDARM 218 (388)
T ss_dssp H----HHHGGGCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCT---------TTSSCSE
T ss_pred h----hhhhccCCcceEEEEECCCCceEEe--ecCCccccccEECCCCCCE----EEEEEecCC---------CCCcceE
Confidence 0 0011122447899999999999888 44445567899999 9999 999885321 0124489
Q ss_pred EEEecccccchhhhhhhhcCCCCCCCeeecCCCCC--ccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCC
Q 003886 338 YAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~--~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
|.+|+ +++..+.|+.... .+..|+|||||++|+|.+.... .....|+++|+.+++
T Consensus 219 ~~~d~-----------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 219 WLINE-----------------DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG------SPDRFIYSADPETLE 275 (388)
T ss_dssp EEEET-----------------TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT------CCCEEEEEECTTTCC
T ss_pred EEEeC-----------------CCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC------CCcceEEEEecCCCc
Confidence 99998 6777888877652 4678999999999999987641 112359999998876
Q ss_pred CCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe------CCeEEEEEEECCCCcEEEecCCCC-
Q 003886 416 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW------GSSQVIISVNVSSGELLRITPAES- 488 (789)
Q Consensus 416 ~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~------~~~~~l~~~dl~tg~~~~lt~~~~- 488 (789)
.+.++.... ... +........|+|||+.|++.... .+...||.+|+.+|+.++++....
T Consensus 276 ~~~l~~~~~-~~~-------------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 341 (388)
T 3pe7_A 276 NRQLTSMPA-CSH-------------LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTS 341 (388)
T ss_dssp EEEEEEECC-EEE-------------EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCC
T ss_pred eEEEEcCCC-cee-------------eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCc
Confidence 543322111 000 00112345799999999987654 566789999999999999886654
Q ss_pred ----------CceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 489 ----------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 489 ----------~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
......|++||+.|++..... ..+.||++++..
T Consensus 342 ~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~ 384 (388)
T 3pe7_A 342 WKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPE 384 (388)
T ss_dssp CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCG
T ss_pred ccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECCh
Confidence 234568999999998887654 456799988764
No 16
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.88 E-value=2.4e-21 Score=208.17 Aligned_cols=317 Identities=13% Similarity=0.126 Sum_probs=199.3
Q ss_pred HhhcCccccceEEEecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCe
Q 003886 88 DFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSK 167 (789)
Q Consensus 88 ~~~~~~~~~~~~~~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~ 167 (789)
++.+.+.+....+ ||++++|+....+...+.....||++++. +++.+++ ..+..|+|||||++
T Consensus 10 ~l~~~~~~~~~~~------dG~~i~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~~l---------~~~~~~~~SpDg~~ 72 (347)
T 2gop_A 10 TFAKFAYLSDPRT------KGELVAYVLTKANLKDNKYENTIVIENLK--NNARRFI---------ENATMPRISPDGKK 72 (347)
T ss_dssp CCCCSCEEEEEEE------ETTEEEEEEEEEETTTTEEEEEEEEEETT--TCCEEEE---------ESCEEEEECTTSSE
T ss_pred cceeeEEcccceE------CCcEEEEEEeecCcccCCccceEEEEeCC--CCceEEc---------ccCCCeEECCCCCE
Confidence 4445555444433 99999999877665556668899998863 3344444 24778999999999
Q ss_pred EEEEecCC-CCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCC
Q 003886 168 LLVVRNPE-NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGS 245 (789)
Q Consensus 168 la~~~~~~-~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 245 (789)
|||++..+ ++..++|.+. .+++.++++.... + ..+.|||||++|+|.+.+..... ..
T Consensus 73 la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~----------~~~~wspdg~~l~~~~~~~~~~~----------~~ 131 (347)
T 2gop_A 73 IAFMRANEEKKVSEIWVADLETLSSKKILEAKN-I----------RSLEWNEDSRKLLIVGFKRREDE----------DF 131 (347)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-E----------EEEEECTTSSEEEEEEECCCC--------------
T ss_pred EEEEEeccCCCcceEEEEECCCCceEEEEcCCC-c----------cceeECCCCCEEEEEEccCCCcC----------Cc
Confidence 99998654 2445688777 5677777776543 3 78999999999999986421100 00
Q ss_pred CCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCce-EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCcee
Q 003886 246 SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRK 324 (789)
Q Consensus 246 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~-~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~ 324 (789)
.......|..+ |..+......+|+++|+.+|+. +.++ . . .+..+.||||| . + |++.......
T Consensus 132 ------~~~~~~~~~~~-g~~~~~~~~~~l~~~d~~~~~~~~~l~--~-~-~~~~~~~spdg-~----~-~~~~~~~~~~ 194 (347)
T 2gop_A 132 ------IFEDDVPAWFD-DLGFFDGEKTTFWIFDTESEEVIEEFE--K-P-RFSSGIWHRDK-I----V-VNVPHREIIP 194 (347)
T ss_dssp -----------CCCC----------CEEEEEEEETTTTEEEEEEE--E-E-TTCEEEEETTE-E----E-EEEECCCSSC
T ss_pred ------EEEcccceeec-CcccccCccceEEEEECCCCeEEeeec--C-C-CcccccCCCCe-E----E-EEEecccccc
Confidence 00001111112 2222223457899999999988 7774 3 3 77899999998 5 4 4443221100
Q ss_pred eeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccc
Q 003886 325 LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 404 (789)
Q Consensus 325 ~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~ 404 (789)
+......||.+| . ++.+.|+.+ .....+ ||||++|+|.+..... ......
T Consensus 195 -----~~~~~~~l~~~d-~------------------~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~---~~~~~~ 244 (347)
T 2gop_A 195 -----QYFKFWDIYIWE-D------------------GKEEKMFEK-VSFYAV--DSDGERILLYGKPEKK---YMSEHN 244 (347)
T ss_dssp -----CSSCCEEEEEEE-T------------------TEEEEEEEE-ESEEEE--EECSSCEEEEECCSSS---CCCSSC
T ss_pred -----cccccccEEEeC-C------------------CceEEeccC-cceeeE--CCCCCEEEEEEccccC---Cccccc
Confidence 000134688887 2 345566654 433333 9999999999866421 111245
Q ss_pred eeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCC-CccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003886 405 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (789)
Q Consensus 405 ~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~-~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~l 483 (789)
+|+++| +++.+.++..... .+.. +.|+ || +++.+..++...|| ++ +|+.+++
T Consensus 245 ~l~~~d--~~~~~~l~~~~~~-------------------~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~--~g~~~~~ 297 (347)
T 2gop_A 245 KLYIYD--GKEVMGILDEVDR-------------------GVGQAKIKD-GK--VYFTLFEEGSVNLY-IW--DGEIKPI 297 (347)
T ss_dssp EEEEEC--SSCEEESSTTCCS-------------------EEEEEEEET-TE--EEEEEEETTEEEEE-EE--SSSEEEE
T ss_pred eEEEEC--CCceEeccccCCc-------------------ccCCccEEc-Cc--EEEEEecCCcEEEE-Ec--CCceEEE
Confidence 799998 4444333332111 1122 5798 87 88888888899999 99 5777777
Q ss_pred cCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEe
Q 003886 484 TPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 519 (789)
Q Consensus 484 t~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~ 519 (789)
+...+.+....+++ .++++.++...|++||.++
T Consensus 298 ~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 298 AKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred ecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 76544333334444 6888999999999999987
No 17
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=2.5e-20 Score=221.65 Aligned_cols=313 Identities=12% Similarity=0.089 Sum_probs=194.2
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCcccee-ecCCcceecccEEEEeCCCCCeEEEEecCCC---
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQ-WAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--- 176 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt-~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--- 176 (789)
...++|||+.++.. .+.|+++++.++ +..++. ...+.........++|||||++|||..+...
T Consensus 21 ~~~w~~dg~~~~~~-----------~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ-----------ENNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR 87 (740)
T ss_dssp CEEECSSSEEEEEE-----------TTEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred ccEECCCCcEEEEc-----------CCcEEEEECCCC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE
Confidence 45678999766432 136778776433 323332 2221110011234899999999999886421
Q ss_pred --CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCC
Q 003886 177 --ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSW 253 (789)
Q Consensus 177 --~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (789)
....++..+ .+++..+++..... ...++|||||++|||+.
T Consensus 88 ~~~~~~~~~~d~~~~~~~~l~~~~~~----------~~~~~~SPdG~~la~~~--------------------------- 130 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLITEERIPNN----------TQWVTWSPVGHKLAYVW--------------------------- 130 (740)
T ss_dssp SCEEEEEEEEETTTTEECCSSCCCTT----------EEEEEECSSTTCEEEEE---------------------------
T ss_pred EccceEEEEEECCCCcEEEcccCCCc----------ceeeEECCCCCEEEEEE---------------------------
Confidence 113455555 45554443322222 27899999999999973
Q ss_pred CCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCC------------------ccceEEEeeCCCCCccEEEE
Q 003886 254 KGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL------------------SVGQVVWAPLNEGLHQYLVF 315 (789)
Q Consensus 254 ~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~------------------~~~~~~wSPDg~~~~~~l~f 315 (789)
+..||++|+.+|+.++++ ..+.. ....+.|||||+. |+|
T Consensus 131 ------------------~~~i~~~~~~~~~~~~lt-~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~----la~ 187 (740)
T 4a5s_A 131 ------------------NNDIYVKIEPNLPSYRIT-WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF----LAY 187 (740)
T ss_dssp ------------------TTEEEEESSTTSCCEECC-SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE----EEE
T ss_pred ------------------CCeEEEEECCCCceEEEc-CCCCccceecCcccccccchhcCCCcceEECCCCCE----EEE
Confidence 257999999999988884 22211 1124899999999 999
Q ss_pred EeecCCc-eeee----------------eeee----ccCCcceEEEecccccchhhhhhhhcCCCCC---C---CeeecC
Q 003886 316 VGWSSET-RKLG----------------IKYC----YNRPCALYAVRVSLYKSEASELELKESSSED---L---PVVNLT 368 (789)
Q Consensus 316 ~~~~~~~-~~~g----------------~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~---~---~~~~Lt 368 (789)
.+.+... +... +.|. .+....|+++|+ ++ + ..++|+
T Consensus 188 ~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~-----------------~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 188 AQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT-----------------DSLSSVTNATSIQIT 250 (740)
T ss_dssp EEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET-----------------TSCCSSSCCCEEEEC
T ss_pred EEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC-----------------CCCCCCCcceEEEec
Confidence 8754331 1100 0010 012236888998 55 5 556665
Q ss_pred C------CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCC----CCCcccceeeEEeeeeccCCCCC
Q 003886 369 E------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG----NFSSLEKIVDVIPVVQCAEGDCF 438 (789)
Q Consensus 369 ~------~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~----~~~~t~~~~~v~~~~~~~~~~~f 438 (789)
. +......++|||||+.+++..++.. ....|+++|+.+++ ...+.. +.. ...+ .
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~-------~~~~i~~~d~~tg~~~~~~~~~~~----l~~---~~~~-~- 314 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQ-------NYSVMDICDYDESSGRWNCLVARQ----HIE---MSTT-G- 314 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESST-------TEEEEEEEEEETTTTEEEECGGGC----EEE---ECSS-S-
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC-------CEEEEEEEECCCCccccceeEEEE----eee---ccCC-c-
Confidence 4 4456788999999998888877652 34579999998876 111100 000 0000 0
Q ss_pred cccccc--CCCCCccccCCCEEE-EEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeC--C-CCC
Q 003886 439 PGLYSS--SILSNPWLSDGCTML-LSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS--P-VDV 512 (789)
Q Consensus 439 ~g~~~~--~~~~~~ws~Dg~~l~-~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss--~-~~p 512 (789)
|.. ....+.|+|||+.|+ +.+..+|..+||.+|+++++.++||....... ..++.|++.|+|+.+. . ..-
T Consensus 315 ---~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~-~~~~~d~~~i~f~~~~~~~~~~~ 390 (740)
T 4a5s_A 315 ---WVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVI-GIEALTSDYLYYISNEYKGMPGG 390 (740)
T ss_dssp ---CSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEE-EEEEECSSEEEEEESCGGGCTTC
T ss_pred ---eEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEE-EEEEEeCCEEEEEEecCCCCCce
Confidence 110 123678999999988 66667788999999999999999998765433 2455778888888865 1 223
Q ss_pred CeEEEEeeccc
Q 003886 513 PQVKYGYFVDK 523 (789)
Q Consensus 513 ~~i~~~~~~~~ 523 (789)
..||++++.++
T Consensus 391 ~~ly~v~~~g~ 401 (740)
T 4a5s_A 391 RNLYKIQLIDY 401 (740)
T ss_dssp BEEEEEETTEE
T ss_pred eEEEEEECCCC
Confidence 56888776543
No 18
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=8.4e-20 Score=201.45 Aligned_cols=244 Identities=17% Similarity=0.148 Sum_probs=180.8
Q ss_pred CCCCeEEEEecCCCCC--CeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCC
Q 003886 163 PSGSKLLVVRNPENES--PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 239 (789)
Q Consensus 163 PdG~~la~~~~~~~~~--~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 239 (789)
+.+++|+|++...++. ..++..+ .++..+.++.....+ ..++|||||++|||.+.+.
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v----------~~~~~Spdg~~la~~s~~~---------- 200 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPL----------MSPAWSPDGSKLAYVTFES---------- 200 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCE----------EEEEECTTSSEEEEEECTT----------
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcc----------eeeEEcCCCCEEEEEEecC----------
Confidence 4589999998764221 4555555 444445554433333 7899999999999987543
Q ss_pred CCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeec
Q 003886 240 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 319 (789)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~ 319 (789)
+...|++||+.+|+.+.+. .....+..++|||||+. |+|++..
T Consensus 201 -------------------------------~~~~i~~~d~~tg~~~~l~--~~~~~~~~~~~spdg~~----la~~~~~ 243 (415)
T 2hqs_A 201 -------------------------------GRSALVIQTLANGAVRQVA--SFPRHNGAPAFSPDGSK----LAFALSK 243 (415)
T ss_dssp -------------------------------SSCEEEEEETTTCCEEEEE--CCSSCEEEEEECTTSSE----EEEEECT
T ss_pred -------------------------------CCcEEEEEECCCCcEEEee--cCCCcccCEEEcCCCCE----EEEEEec
Confidence 2368999999999988873 34446789999999999 9988743
Q ss_pred CCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCC
Q 003886 320 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 399 (789)
Q Consensus 320 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~ 399 (789)
. ....||++|+ .+++.++|+.+...+..++|||||++|+|.+.++
T Consensus 244 ~------------g~~~i~~~d~-----------------~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~------ 288 (415)
T 2hqs_A 244 T------------GSLNLYVMDL-----------------ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA------ 288 (415)
T ss_dssp T------------SSCEEEEEET-----------------TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTT------
T ss_pred C------------CCceEEEEEC-----------------CCCCEEeCcCCCCcccceEECCCCCEEEEEECCC------
Confidence 2 2347999998 7778888988877788999999999999998654
Q ss_pred ccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc
Q 003886 400 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 479 (789)
Q Consensus 400 ~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~ 479 (789)
+..+||++|+.++..+.++.... .+..+.|+|||+.|++.+...+...|+.+|+.+++
T Consensus 289 --g~~~i~~~d~~~~~~~~l~~~~~--------------------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 289 --GRPQVYKVNINGGAPQRITWEGS--------------------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp --SSCEEEEEETTSSCCEECCCSSS--------------------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred --CCcEEEEEECCCCCEEEEecCCC--------------------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 24579999998766443322111 12256899999999988877777899999999999
Q ss_pred EEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 480 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 480 ~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
.+.++... ......|+++|+.|++...... ...|++.++.+
T Consensus 347 ~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~g 387 (415)
T 2hqs_A 347 VQVLSSTF-LDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTDG 387 (415)
T ss_dssp EEECCCSS-SCEEEEECTTSSEEEEEEEETT-EEEEEEEETTS
T ss_pred EEEecCCC-CcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECCC
Confidence 98887654 4556789999999888775443 34688888653
No 19
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=8.2e-21 Score=207.60 Aligned_cols=311 Identities=13% Similarity=0.137 Sum_probs=201.2
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecc-cEEEEeCCCCCeEEEEecCCCCCC
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTG-ASAVVPSPSGSKLLVVRNPENESP 179 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~-~~~~~~SPdG~~la~~~~~~~~~~ 179 (789)
.+.+||||++|+|.... .....||++++ .+++.++++... .. ...+.|||||++|+|++...
T Consensus 40 ~~~~SpdG~~l~~~~~~------~g~~~l~~~d~--~~~~~~~l~~~~-----~~~~~~~~~spdg~~l~~~~~~~---- 102 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDF------DGNRNYYLLNL--ETQQAVQLTEGK-----GDNTFGGFISTDERAFFYVKNEL---- 102 (396)
T ss_dssp SCCBCTTSCEEEEEECT------TSSCEEEEEET--TTTEEEECCCSS-----CBCTTTCEECTTSSEEEEEETTT----
T ss_pred cCcCCCCCCEEEEEEec------CCCceEEEEEC--CCCcEEEeecCC-----CCccccceECCCCCEEEEEEcCC----
Confidence 35678999999998653 13457888876 344555665443 12 22388999999999998764
Q ss_pred eEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcce
Q 003886 180 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (789)
Q Consensus 180 ~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (789)
+++.++ .+++.++++... .. |+|||++|+|.+...... .+.....
T Consensus 103 ~l~~~d~~~~~~~~~~~~~-------------~~--~~~~g~~l~~~~~~~~~~-------------------~~~~~~~ 148 (396)
T 3c5m_A 103 NLMKVDLETLEEQVIYTVD-------------EE--WKGYGTWVANSDCTKLVG-------------------IEILKRD 148 (396)
T ss_dssp EEEEEETTTCCEEEEEECC-------------TT--EEEEEEEEECTTSSEEEE-------------------EEEEGGG
T ss_pred cEEEEECCCCCcEEEEecc-------------cc--cCCCCCEEEeccCCcccc-------------------ccccccc
Confidence 577777 566666655532 11 888888888764321100 0000112
Q ss_pred eeCCcccccC-----CccCceEEEEEccCCceEeccCCCCCCccceEEEee-CCCCCccEEEEEeecCCceeeeeeeecc
Q 003886 259 WEEDWGETYA-----GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYN 332 (789)
Q Consensus 259 ~~~d~g~~~~-----~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP-Dg~~~~~~l~f~~~~~~~~~~g~~~~~~ 332 (789)
|++|...... ......|+++|+++++.+.+ ......+..+.||| ||+. |+|++.... ..
T Consensus 149 ~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~ 213 (396)
T 3c5m_A 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI--HQDTAWLGHPIYRPFDDST----VGFCHEGPH---------DL 213 (396)
T ss_dssp CCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCS---------SS
T ss_pred cCCCCcceeeeeeccCCCcceEEEEECCCCcEEee--ccCCcccccceECCCCCCE----EEEEecCCC---------CC
Confidence 2333211110 12457899999999998887 34445677899999 8998 999874111 01
Q ss_pred CCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCC--CccCcceecCCCCEEEEEecCCCCCCCCccccceeEEee
Q 003886 333 RPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI--SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 410 (789)
Q Consensus 333 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~--~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d 410 (789)
....||.+|+ +++..+.|+... ..+..+.|||||++|+|.+.... .....|+++|
T Consensus 214 ~~~~l~~~d~-----------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~l~~~d 270 (396)
T 3c5m_A 214 VDARMWLVNE-----------------DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG------QTDRVIYKAN 270 (396)
T ss_dssp CSCCCEEEET-----------------TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETT------TCCEEEEEEC
T ss_pred CCceEEEEEC-----------------CCCceeEeeccCCCccccceEECCCCCEEEEEecCCC------CccceEEEEE
Confidence 2257999998 666777776632 24677899999999999987641 1123499999
Q ss_pred cCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcccc-CCCEEEEEEE-------------eCCeEEEEEEECC
Q 003886 411 WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSI-------------WGSSQVIISVNVS 476 (789)
Q Consensus 411 ~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~-Dg~~l~~~~~-------------~~~~~~l~~~dl~ 476 (789)
+.++..+.++. +++ .. +.|+| ||+.+++... ..+...||.+|+.
T Consensus 271 ~~~g~~~~l~~----------------~~~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 271 PETLENEEVMV----------------MPP-----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp TTTCCEEEEEE----------------CCS-----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred CCCCCeEEeee----------------CCC-----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 98765432211 111 11 57999 9997665432 1245789999999
Q ss_pred CCcEEEecCCCCC-----------ceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 477 SGELLRITPAESN-----------FSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 477 tg~~~~lt~~~~~-----------~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
+++.++++..... .....|++||+.|++..... ..+.||.+++.++
T Consensus 329 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 329 AKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPES 385 (396)
T ss_dssp TTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTT
T ss_pred cCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccc
Confidence 9988888765431 23357899999998887654 4567999887654
No 20
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=8.9e-20 Score=217.11 Aligned_cols=312 Identities=13% Similarity=0.090 Sum_probs=199.6
Q ss_pred ceEEEecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcc--------e------------eccc
Q 003886 97 KAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPV--------E------------MTGA 156 (789)
Q Consensus 97 ~~~~~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~--------~------------~~~~ 156 (789)
.....+.+||||++++|..... .+.....||++++.+ ++.++++...... + ...+
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d---~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKD---SDRNQLDLWSYDIGS--GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCS---SCTTEEEEEEEETTT--CCEEEEECGGGTC--------------------CCEES
T ss_pred CCCCCceEecCCCEEEEEeccC---CCCcccEEEEEECCC--CceeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 3445667789999999976421 112345889988633 3444443221000 0 0125
Q ss_pred EEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCC---ceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 157 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQS---QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~---~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
..++|||||++|+|.+. .+++.++ .++ +..+++.....+ ..++|||||++|||++.
T Consensus 112 ~~~~~SpDg~~l~~~~~-----~~i~~~d~~~~~~~~~~~l~~~~~~~----------~~~~~SPDG~~la~~~~----- 171 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-----GELYLYDLKQEGKAAVRQLTHGEGFA----------TDAKLSPKGGFVSFIRG----- 171 (741)
T ss_dssp CCCEECTTSSEEEEEET-----TEEEEEESSSCSTTSCCBCCCSSSCE----------EEEEECTTSSEEEEEET-----
T ss_pred ceeEECCCCCEEEEEeC-----CcEEEEECCCCCcceEEEcccCCccc----------ccccCCCCCCEEEEEeC-----
Confidence 78899999999999886 2466666 444 444433322222 78999999999999732
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCc----------------
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLS---------------- 296 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~---------------- 296 (789)
..|++||+.+++.++++ .....
T Consensus 172 ----------------------------------------~~i~~~d~~~g~~~~~~--~~~~~~~~~g~~~~v~~~~~~ 209 (741)
T 2ecf_A 172 ----------------------------------------RNLWVIDLASGRQMQLT--ADGSTTIGNGIAEFVADEEMD 209 (741)
T ss_dssp ----------------------------------------TEEEEEETTTTEEEECC--CCCCSSEEESCCCHHHHHHSC
T ss_pred ----------------------------------------CcEEEEecCCCCEEEec--cCCccceeccccceeeeeccc
Confidence 36999999999888873 22211
Q ss_pred -cceEEEeeCCCCCccEEEEEeecCCcee--------------eeeeee----ccCCcceEEEecccccchhhhhhhhcC
Q 003886 297 -VGQVVWAPLNEGLHQYLVFVGWSSETRK--------------LGIKYC----YNRPCALYAVRVSLYKSEASELELKES 357 (789)
Q Consensus 297 -~~~~~wSPDg~~~~~~l~f~~~~~~~~~--------------~g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~ 357 (789)
...+.|||||+. |+|.+....... ....|. .+....||++|+
T Consensus 210 ~~~~~~~SpDg~~----l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~--------------- 270 (741)
T 2ecf_A 210 RHTGYWWAPDDSA----IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP--------------- 270 (741)
T ss_dssp CCCSEEECTTSSC----EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS---------------
T ss_pred cccceEECCCCCE----EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC---------------
Confidence 467999999999 999875432100 000000 012237899998
Q ss_pred CCCC-CCeeecCC---CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeecc
Q 003886 358 SSED-LPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA 433 (789)
Q Consensus 358 ~~~~-~~~~~Lt~---~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~ 433 (789)
++ ++.+.+.. +...+..++| |||++|++.+.... .....|+++|+.++..+.+.....
T Consensus 271 --~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~------~~~~~i~~~d~~~g~~~~~~~~~~--------- 332 (741)
T 2ecf_A 271 --AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD------QKKLDLVEVTLASNQQRVLAHETS--------- 332 (741)
T ss_dssp --STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT------SSEEEEEEEETTTCCEEEEEEEEC---------
T ss_pred --CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc------CCeEEEEEEECCCCceEEEEEcCC---------
Confidence 66 66666652 3445778999 99999999886431 134679999998866433221110
Q ss_pred CCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeE-EeeecCCEEEEEEeCCCC-
Q 003886 434 EGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS-LLTLDGDNIIAVSSSPVD- 511 (789)
Q Consensus 434 ~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~-~~s~dg~~l~~~~ss~~~- 511 (789)
.. |...+..+.|+|||+ +++++..++...||.+|++++ .+.++......... .|++||+.|++..+....
T Consensus 333 -~~-----~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~ 404 (741)
T 2ecf_A 333 -PT-----WVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESAR 404 (741)
T ss_dssp -SS-----CCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTT
T ss_pred -CC-----cCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCc
Confidence 00 111234678999999 777777778889999998766 88887765544333 589999998887764331
Q ss_pred CCeEEEEee
Q 003886 512 VPQVKYGYF 520 (789)
Q Consensus 512 p~~i~~~~~ 520 (789)
...||..+.
T Consensus 405 ~~~l~~~~~ 413 (741)
T 2ecf_A 405 ESQIYAVPL 413 (741)
T ss_dssp CBEEEEEET
T ss_pred eEEEEEEEc
Confidence 234666554
No 21
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.85 E-value=1.2e-20 Score=194.08 Aligned_cols=175 Identities=17% Similarity=0.181 Sum_probs=120.8
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC-
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG- 648 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~- 648 (789)
+.||.+|+|+++.|. ...+.|+||++||+++......+....+.|+++||+|+++|+||++..+............
T Consensus 37 ~~dG~~i~g~l~~P~---~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~ 113 (259)
T 4ao6_A 37 EVDGRTVPGVYWSPA---EGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVG 113 (259)
T ss_dssp EETTEEEEEEEEEES---SSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGGG
T ss_pred eeCCeEEEEEEEeCC---CCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhhh
Confidence 458999999999997 4567899999999887655556677788999999999999999965443322111111110
Q ss_pred --------------cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcC
Q 003886 649 --------------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT 714 (789)
Q Consensus 649 --------------~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~ 714 (789)
...+.|..++++++... +|.+||+++|+|+||+++++++...| +++++|+..+....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~~~~------ 184 (259)
T 4ao6_A 114 LDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMGVEG------ 184 (259)
T ss_dssp STTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCCTTS------
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCC-ceEEEEEecccccc------
Confidence 11145677788887665 68999999999999999999999877 57777765432210
Q ss_pred CCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 715 TDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.. ..++...+.+|++|+|++||++|.+||++++.++|++|..
T Consensus 185 -----------------------~~--------~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~ 226 (259)
T 4ao6_A 185 -----------------------VN--------GEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGT 226 (259)
T ss_dssp -----------------------TT--------HHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC
T ss_pred -----------------------cc--------ccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCC
Confidence 00 0122345678999999999999999999999999999864
No 22
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=3.5e-20 Score=202.30 Aligned_cols=291 Identities=15% Similarity=0.082 Sum_probs=186.9
Q ss_pred EEEEEEeecCCCCccceeecCCcceecccEE-----EEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCcc
Q 003886 128 FMLSTVISKENENSVTFQWAPFPVEMTGASA-----VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVH 201 (789)
Q Consensus 128 ~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~-----~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~ 201 (789)
.+|... ..+...++||..+ ..... |+|||||++|||.+..+ +..++|.++ .+++.++++......
T Consensus 12 ~~~~~~--~~g~~~~~lt~~~-----~~~~~~~~~~~~~SpDg~~l~~~~~~~-g~~~l~~~d~~~g~~~~lt~~~~~~- 82 (388)
T 3pe7_A 12 DTYQDA--STGAQVTRLTPPD-----VTCHRNYFYQKCFTRDGSKLLFGGAFD-GPWNYYLLDLNTQVATQLTEGRGDN- 82 (388)
T ss_dssp EEEECT--TTCCEEEECSCTT-----SCEECCCTTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTCEEEECCCSSCBC-
T ss_pred eEEecC--CCCcceEEecCCc-----ccccchhhcCccCCCCCCEEEEEEcCC-CCceEEEEeCCCCceEEeeeCCCCC-
Confidence 455533 3444566776554 22333 89999999999998754 566788888 567766665543222
Q ss_pred ccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEcc
Q 003886 202 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 281 (789)
Q Consensus 202 g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~ 281 (789)
...+.|||||++|+|...+ ..|+++|++
T Consensus 83 --------~~~~~~spdg~~l~~~~~~--------------------------------------------~~l~~~d~~ 110 (388)
T 3pe7_A 83 --------TFGGFLSPDDDALFYVKDG--------------------------------------------RNLMRVDLA 110 (388)
T ss_dssp --------SSSCEECTTSSEEEEEETT--------------------------------------------TEEEEEETT
T ss_pred --------ccceEEcCCCCEEEEEeCC--------------------------------------------CeEEEEECC
Confidence 1367899999999997532 479999999
Q ss_pred CCceEeccCCCCCC-ccceEEEeeCCCCCccEEEEEeecCCcee-----eee--eeeccCCcceEEEecccccchhhhhh
Q 003886 282 SGEVQAVKGIPKSL-SVGQVVWAPLNEGLHQYLVFVGWSSETRK-----LGI--KYCYNRPCALYAVRVSLYKSEASELE 353 (789)
Q Consensus 282 ~g~~~~l~~~~~~~-~~~~~~wSPDg~~~~~~l~f~~~~~~~~~-----~g~--~~~~~~~~~l~~~d~~~~~~~~~~~~ 353 (789)
+++.+.+...+... ......++|||+. ++.......... .++ .+.......||++|+
T Consensus 111 ~g~~~~~~~~~~~~~~~~~~~~~~dg~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~----------- 175 (388)
T 3pe7_A 111 TLEENVVYQVPAEWVGYGTWVANSDCTK----LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL----------- 175 (388)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSE----EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET-----------
T ss_pred CCcceeeeechhhcccccceeECCCCCe----eccccccCcccccccccchhhhhhccCCcceEEEEEC-----------
Confidence 99887763222221 1122345899998 775432111000 000 001123458999998
Q ss_pred hhcCCCCCCCeeecCCCCCccCcceecC-CCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeec
Q 003886 354 LKESSSEDLPVVNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC 432 (789)
Q Consensus 354 ~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp-DG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~ 432 (789)
.+++.+.|+........++||| ||++|+|.+.... .....+||++|..++..+.++......
T Consensus 176 ------~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~-----~~~~~~l~~~d~~~~~~~~l~~~~~~~------ 238 (388)
T 3pe7_A 176 ------KTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPH-----DLVDARMWLINEDGTNMRKVKTHAEGE------ 238 (388)
T ss_dssp ------TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCT-----TTSSCSEEEEETTSCCCEESCCCCTTE------
T ss_pred ------CCCceEEeecCCccccccEECCCCCCEEEEEEecCC-----CCCcceEEEEeCCCCceEEeeeCCCCc------
Confidence 7788888887766778999999 9999999986421 112457999998876655444322100
Q ss_pred cCCCCCccccccCCCCCccccCCCEEEEEEEeCCeE--EEEEEECCCCcEEEecCCCCC------ceeEEeeecCCEEEE
Q 003886 433 AEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ--VIISVNVSSGELLRITPAESN------FSWSLLTLDGDNIIA 504 (789)
Q Consensus 433 ~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~--~l~~~dl~tg~~~~lt~~~~~------~~~~~~s~dg~~l~~ 504 (789)
.+..+.|||||+.|+|.+...+.. .||.+|+++|+.+.++...+. .....|++||+.|++
T Consensus 239 ------------~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 239 ------------SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp ------------EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC--
T ss_pred ------------ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCccee
Confidence 112457999999998888776554 599999999998887654320 111368999999888
Q ss_pred EEeC-----CCCCCeEEEEeeccc
Q 003886 505 VSSS-----PVDVPQVKYGYFVDK 523 (789)
Q Consensus 505 ~~ss-----~~~p~~i~~~~~~~~ 523 (789)
.... ......|++.++.++
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp ----------CCCCEEEEEETTTT
T ss_pred EeeeccccccCCCCEEEEEeccCC
Confidence 7643 245567999987654
No 23
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=1.4e-19 Score=214.88 Aligned_cols=314 Identities=11% Similarity=0.038 Sum_probs=192.6
Q ss_pred EEEecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCC-
Q 003886 99 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENE- 177 (789)
Q Consensus 99 ~~~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~- 177 (789)
.....+||||+.+ +. + ..+.++++++.+. +..++....- .....+..++|||||++|||.......
T Consensus 19 ~~~~~~spdg~~~-~~-~--------~dg~i~~~d~~~g--~~~~~~~~~~-~~~~~v~~~~~SpDg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 19 DPEAKWISDTEFI-YR-E--------QKGTVRLWNVETN--TSTVLIEGKK-IESLRAIRYEISPDREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCBSSSSCBC-CC-C--------SSSCEEEBCGGGC--CCEEEECTTT-TTTTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred ccccEEcCCCcEE-EE-e--------CCCCEEEEECCCC--cEEEEecccc-ccccccceEEECCCCCEEEEEecCccce
Confidence 4456789999955 32 1 1236788776433 3333332210 000137789999999999999765422
Q ss_pred ----CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCC
Q 003886 178 ----SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNS 252 (789)
Q Consensus 178 ----~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (789)
..++++.+ .+++.+++.... ... .....++|||||++|||++.
T Consensus 86 ~~~~~~~i~~~d~~~~~~~~l~~~~-~~~------~~~~~~~~SPdG~~la~~~~------------------------- 133 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDPQSLDPPE-VSN------AKLQYAGWGPKGQQLIFIFE------------------------- 133 (723)
T ss_dssp SSCCCSEEEEEESSSCCCEECCCTT-CCS------CCCSBCCBCSSTTCEEEEET-------------------------
T ss_pred eecceeeEEEEECCCCceEeccCCc-ccc------ccccccEECCCCCEEEEEEC-------------------------
Confidence 14555555 455553333221 111 11268999999999999742
Q ss_pred CCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCC------------------ccceEEEeeCCCCCccEEE
Q 003886 253 WKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL------------------SVGQVVWAPLNEGLHQYLV 314 (789)
Q Consensus 253 ~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~------------------~~~~~~wSPDg~~~~~~l~ 314 (789)
..|+++|+++|+.++++. .... ....++|||||+. |+
T Consensus 134 --------------------~~i~~~~~~~g~~~~~~~-~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~----la 188 (723)
T 1xfd_A 134 --------------------NNIYYCAHVGKQAIRVVS-TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR----LA 188 (723)
T ss_dssp --------------------TEEEEESSSSSCCEEEEC-CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE----EE
T ss_pred --------------------CeEEEEECCCCceEEEec-CCCCCceECcccceeEEEEeccCcceEEECCCCCE----EE
Confidence 469999999998887741 1111 1257999999999 99
Q ss_pred EEeecCCceee---------------eeeee----ccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCC----
Q 003886 315 FVGWSSETRKL---------------GIKYC----YNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTES---- 370 (789)
Q Consensus 315 f~~~~~~~~~~---------------g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~---- 370 (789)
|.+......+. ...|. .+....|+++|+ .+++ .+.|+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~-----------------~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL-----------------NGPTHDLEMMPPDDPR 251 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES-----------------SSSCCCEECCCCCCGG
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC-----------------CCCceeEEeeCCccCC
Confidence 98754321000 00000 011237999998 5555 3666653
Q ss_pred --CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCcccccc-CCC
Q 003886 371 --ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS-SIL 447 (789)
Q Consensus 371 --~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~-~~~ 447 (789)
...+..++|||||+.|++.+.+. .....|+++|+.+++...+..... . . |.. ...
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~-------~~~~~i~~~d~~~g~~~~~~~~~~----------~-~----~~~~~~~ 309 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRA-------QNVSILTLCDATTGVCTKKHEDES----------E-A----WLHRQNE 309 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETT-------SCEEEEEEEETTTCCEEEEEEEEC----------S-S----CCCCCCC
T ss_pred CccceeEEEEEeCCCeEEEEEEcCC-------CCeEEEEEEeCCCCcceEEEEecc----------C-C----EEeccCC
Confidence 34567899999999887776653 134579999998765432211100 0 0 000 013
Q ss_pred CCccccCCCEEEEE-EEeCC----eEEEEEEE-CCCCc---EEEecCCCCCce-eEEeeecCCEEEEEEeCCC-CCCeEE
Q 003886 448 SNPWLSDGCTMLLS-SIWGS----SQVIISVN-VSSGE---LLRITPAESNFS-WSLLTLDGDNIIAVSSSPV-DVPQVK 516 (789)
Q Consensus 448 ~~~ws~Dg~~l~~~-~~~~~----~~~l~~~d-l~tg~---~~~lt~~~~~~~-~~~~s~dg~~l~~~~ss~~-~p~~i~ 516 (789)
.+.|||||+.|++. +...+ ..+||.+| ..+++ .+.++....... ...|++||+.|++...... .-..||
T Consensus 310 ~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 389 (723)
T 1xfd_A 310 EPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLY 389 (723)
T ss_dssp CCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEE
T ss_pred CceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEE
Confidence 67899999999887 55555 67899999 67777 777775544332 2479999999988876531 223466
Q ss_pred EEeec
Q 003886 517 YGYFV 521 (789)
Q Consensus 517 ~~~~~ 521 (789)
.++..
T Consensus 390 ~~~~~ 394 (723)
T 1xfd_A 390 SANTV 394 (723)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 66544
No 24
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.82 E-value=2e-19 Score=196.52 Aligned_cols=191 Identities=16% Similarity=0.080 Sum_probs=141.2
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|.+++++++.|++ .++.|+||++||++.. ...+....+.|+++||.|+++|+|| +|.+. .......+
T Consensus 135 dg~~i~~~l~~p~~---~~~~P~vl~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~rG---~G~s~----~~~~~~~~ 202 (386)
T 2jbw_A 135 DGIPMPVYVRIPEG---PGPHPAVIMLGGLEST--KEESFQMENLVLDRGMATATFDGPG---QGEMF----EYKRIAGD 202 (386)
T ss_dssp TTEEEEEEEECCSS---SCCEEEEEEECCSSCC--TTTTHHHHHHHHHTTCEEEEECCTT---SGGGT----TTCCSCSC
T ss_pred CCEEEEEEEEcCCC---CCCCCEEEEeCCCCcc--HHHHHHHHHHHHhCCCEEEEECCCC---CCCCC----CCCCCCcc
Confidence 78999999999974 3678999999987654 2333334788999999999999998 44441 11111223
Q ss_pred -HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCcc
Q 003886 652 -VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 730 (789)
Q Consensus 652 -~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (789)
.+++.++++++.+++.+|.++|+|+|||+||+++++++.+ |++|+++|+. |+.++...... .+. .....
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~--~~~-~~~~~----- 272 (386)
T 2jbw_A 203 YEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDL--ETP-LTKES----- 272 (386)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGG--SCH-HHHHH-----
T ss_pred HHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHh--ccH-HHHHH-----
Confidence 3568889999999888899999999999999999999998 8899999999 98876443321 000 00000
Q ss_pred ccccCCC-CChhhH-HHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 731 KDSFTES-PSVEDL-TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 731 ~~~~~~~-~~~~~~-~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
.....+. ...+.. ..+...++...+.++++|+|++||++|. ||+.++.++++++
T Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l 328 (386)
T 2jbw_A 273 WKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELV 328 (386)
T ss_dssp HHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHS
T ss_pred HHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHh
Confidence 0001111 122333 5567788888899999999999999999 9999999999998
No 25
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=2.2e-18 Score=179.26 Aligned_cols=263 Identities=14% Similarity=0.141 Sum_probs=180.1
Q ss_pred cceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cC-CceeEEEecCCCcc
Q 003886 124 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ-SQLEKEFHVPQTVH 201 (789)
Q Consensus 124 ~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~-~~~~~~~~~~~~~~ 201 (789)
.....|+++++. .++.+.+.... ..+..++|||||++|++..+. .++.++ .+ ++..++..... .
T Consensus 19 ~~~~~i~~~d~~--~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~-----~i~~~d~~~~~~~~~~~~~~~--~ 84 (297)
T 2ojh_A 19 SMRSSIEIFNIR--TRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSEG-----LLYRLSLAGDPSPEKVDTGFA--T 84 (297)
T ss_dssp CCCEEEEEEETT--TTEEEEEEEES-----SCCEEEEECTTSSEEEEEETT-----EEEEEESSSCCSCEECCCTTC--C
T ss_pred CcceeEEEEeCC--CCceeeeccCC-----cceEeeEECCCCCEEEEEcCC-----eEEEEeCCCCCCceEeccccc--c
Confidence 456678887763 33344444333 458899999999999997643 365555 44 55544432210 0
Q ss_pred ccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEcc
Q 003886 202 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 281 (789)
Q Consensus 202 g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~ 281 (789)
.. ...+.|||||++|++...... ....||++++.
T Consensus 85 ~~------~~~~~~spdg~~l~~~~~~~~----------------------------------------~~~~l~~~~~~ 118 (297)
T 2ojh_A 85 IC------NNDHGISPDGALYAISDKVEF----------------------------------------GKSAIYLLPST 118 (297)
T ss_dssp CB------CSCCEECTTSSEEEEEECTTT----------------------------------------SSCEEEEEETT
T ss_pred cc------ccceEECCCCCEEEEEEeCCC----------------------------------------CcceEEEEECC
Confidence 11 268999999999999864321 24789999999
Q ss_pred CCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCC
Q 003886 282 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 361 (789)
Q Consensus 282 ~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 361 (789)
+++.+.+. ... ....+.|+|||+. |+|++.... ...||.+++ .+
T Consensus 119 ~~~~~~~~--~~~-~~~~~~~spdg~~----l~~~~~~~~------------~~~l~~~~~-----------------~~ 162 (297)
T 2ojh_A 119 GGTPRLMT--KNL-PSYWHGWSPDGKS----FTYCGIRDQ------------VFDIYSMDI-----------------DS 162 (297)
T ss_dssp CCCCEECC--SSS-SEEEEEECTTSSE----EEEEEEETT------------EEEEEEEET-----------------TT
T ss_pred CCceEEee--cCC-CccceEECCCCCE----EEEEECCCC------------ceEEEEEEC-----------------CC
Confidence 88887773 222 3667899999999 998774322 236888887 66
Q ss_pred CCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccc
Q 003886 362 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 441 (789)
Q Consensus 362 ~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~ 441 (789)
+..+.++........+.|||||+.|++.+..+ +..+||.++..++....++....
T Consensus 163 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~----------------- 217 (297)
T 2ojh_A 163 GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT--------GQMQIWRVRVDGSSVERITDSAY----------------- 217 (297)
T ss_dssp CCEEECCCSSSCEEEEEECTTSSEEEEEECTT--------SSCEEEEEETTSSCEEECCCCSE-----------------
T ss_pred CcceEcccCCCccccceECCCCCEEEEEecCC--------CCccEEEECCCCCCcEEEecCCc-----------------
Confidence 77788887777788999999999999887643 24568888766544333322111
Q ss_pred cccCCCCCccccCCCEEEEEEEeC--------CeEEEEEEECCCCcEEEecC---CCCCceeEEeeecCCEEEEEEeCCC
Q 003886 442 YSSSILSNPWLSDGCTMLLSSIWG--------SSQVIISVNVSSGELLRITP---AESNFSWSLLTLDGDNIIAVSSSPV 510 (789)
Q Consensus 442 ~~~~~~~~~ws~Dg~~l~~~~~~~--------~~~~l~~~dl~tg~~~~lt~---~~~~~~~~~~s~dg~~l~~~~ss~~ 510 (789)
.+..+.|+|||+.|++.+... +...|+.+|+.+++.+.+.. .........|+++|+.|++......
T Consensus 218 ---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 218 ---GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp ---EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred ---ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 123467999999998887764 34789999999988776653 2233445689999999988877654
No 26
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.82 E-value=1.6e-19 Score=193.42 Aligned_cols=210 Identities=13% Similarity=0.165 Sum_probs=145.5
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCch--hhc-cC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEE--ALQ-SL 643 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~--~~~-~~ 643 (789)
.+.+.+|.++.++++.|++. .++.|+||++||+++... +......|+++||.|+++|+||.++.+.. ... ..
T Consensus 72 ~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~---~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~ 146 (337)
T 1vlq_A 72 TFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRG---FPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPE 146 (337)
T ss_dssp EEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCC---CGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCS
T ss_pred EEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCCC---CchhhcchhhCCCEEEEecCCCCCCcccCCCCccccc
Confidence 45666889999999999742 567899999999876532 22334577899999999999997644321 100 00
Q ss_pred ---CCCC--------C-------cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 644 ---PGKV--------G-------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 644 ---~~~~--------~-------~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
...+ . ...++|+.++++++.+++.+|.++|+|+|||+||++++.++.++| +++++|+.+|.
T Consensus 147 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~ 225 (337)
T 1vlq_A 147 GPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPF 225 (337)
T ss_dssp SSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCC
T ss_pred ccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCc
Confidence 0000 0 134789999999999988889999999999999999999999988 59999999985
Q ss_pred c-chhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 003886 706 C-NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYH 784 (789)
Q Consensus 706 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~ 784 (789)
. ++..+........+.....+.. .. ..........+...++...+.++++|+|++||++|.+||++++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~ 300 (337)
T 1vlq_A 226 LCHFRRAVQLVDTHPYAEITNFLK----TH-RDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNY 300 (337)
T ss_dssp SCCHHHHHHHCCCTTHHHHHHHHH----HC-TTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccCHHHHHhcCCCcchHHHHHHHH----hC-chhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHh
Confidence 4 4433321111111111000000 00 0001122333455677778889999999999999999999999999999
Q ss_pred CCC
Q 003886 785 IPF 787 (789)
Q Consensus 785 l~~ 787 (789)
++.
T Consensus 301 l~~ 303 (337)
T 1vlq_A 301 YAG 303 (337)
T ss_dssp CCS
T ss_pred cCC
Confidence 874
No 27
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=4e-19 Score=210.74 Aligned_cols=311 Identities=12% Similarity=0.110 Sum_probs=186.3
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC----
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN---- 176 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~---- 176 (789)
.+.++|||+ +++.. ..+.|+++++. +++.++++...- .....+..++|||||++|||.+..++
T Consensus 20 ~~~~s~dg~-~~~~~---------~d~~i~~~~~~--~g~~~~~~~~~~-~~~~~~~~~~~SpDg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWISGQE-YLHQS---------ADNNIVLYNIE--TGQSYTILSNRT-MKSVNASNYGLSPDRQFVYLESDYSKLWRY 86 (719)
T ss_dssp CCEESSSSE-EEEEC---------TTSCEEEEESS--SCCEEEEECHHH-HHTTTCSEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccEECCCCe-EEEEc---------CCCCEEEEEcC--CCcEEEEEcccc-ccccceeeEEECCCCCeEEEEecCceeEEe
Confidence 456789995 44431 13468888863 334445543220 00013778999999999999876321
Q ss_pred -CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCC
Q 003886 177 -ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 254 (789)
Q Consensus 177 -~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (789)
...+++..+ .+++......+...+ ..++|||||++|||+.
T Consensus 87 s~~~~i~~~d~~~g~~~~~~~l~~~~----------~~~~~SPDG~~la~~~---------------------------- 128 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRGNELPRPI----------QYLCWSPVGSKLAYVY---------------------------- 128 (719)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCSSB----------CCEEECSSTTCEEEEE----------------------------
T ss_pred ecceEEEEEECCCCccccceecCccc----------ccceECCCCCEEEEEE----------------------------
Confidence 123455554 445441001122222 7899999999999973
Q ss_pred CcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCC------------------ccceEEEeeCCCCCccEEEEE
Q 003886 255 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL------------------SVGQVVWAPLNEGLHQYLVFV 316 (789)
Q Consensus 255 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~------------------~~~~~~wSPDg~~~~~~l~f~ 316 (789)
+..|++||+.+|+.++++ ..+.. ....++|||||+. |+|.
T Consensus 129 -----------------~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~----la~~ 186 (719)
T 1z68_A 129 -----------------QNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF----LAYA 186 (719)
T ss_dssp -----------------TTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE----EEEE
T ss_pred -----------------CCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccCcccEEECCCCCE----EEEE
Confidence 147999999999888773 11211 1147999999999 9998
Q ss_pred eecCCc-eee--------------eeee----eccCCcceEEEecccccchhhhhhhhcCCCCCCCee---ec------C
Q 003886 317 GWSSET-RKL--------------GIKY----CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV---NL------T 368 (789)
Q Consensus 317 ~~~~~~-~~~--------------g~~~----~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~L------t 368 (789)
+.+... ... ...| ..+....|+++|+ ++++.. ++ .
T Consensus 187 ~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~-----------------~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 187 EFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT-----------------TYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp EEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES-----------------SCHHHHCCEECCCCHHHH
T ss_pred EECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC-----------------CCCCccceeEccCCccCC
Confidence 854321 100 0000 0012237889998 444431 23 3
Q ss_pred CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEee----cCCCCCCCcccceeeEEeeeeccCCCCCcccccc
Q 003886 369 ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID----WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 444 (789)
Q Consensus 369 ~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d----~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~ 444 (789)
.+......++|||||+.++...++. ....+|+++| ..+++.+.++..... . . .+ |..
T Consensus 250 ~~~~~~~~~~~SpD~~~~~~~~~~~-------~~~~~l~~~d~~~~~~~g~~~~~~~~~~~------~-~----~~-~~~ 310 (719)
T 1z68_A 250 SSDYYFSWLTWVTDERVCLQWLKRV-------QNVSVLSICDFREDWQTWDCPKTQEHIEE------S-R----TG-WAG 310 (719)
T ss_dssp TSCEEEEEEEESSSSEEEEEEEESS-------TTEEEEEEEEECSSSSSEECCGGGEEEEE------C-S----SS-CSS
T ss_pred CCcceEEEeEEeCCCeEEEEEeccc-------cCeEEEEEEcccCCCCCCceEEEEecccc------c-C----Cc-eEc
Confidence 3455678899999976444333332 1345799999 776655443310000 0 0 00 000
Q ss_pred --CCCCCccccCCCEEEEEE-EeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeC--C-CCCCeEEEE
Q 003886 445 --SILSNPWLSDGCTMLLSS-IWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS--P-VDVPQVKYG 518 (789)
Q Consensus 445 --~~~~~~ws~Dg~~l~~~~-~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss--~-~~p~~i~~~ 518 (789)
....+.|+|||+.|++.. ...+..+||.+|+.+++.++++.....+....++ +++.|+++... . ..-..+|..
T Consensus 311 ~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 311 GFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp SSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred cccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 012678999999888854 4567889999999999988998765544445566 89999888865 1 233457777
Q ss_pred eec
Q 003886 519 YFV 521 (789)
Q Consensus 519 ~~~ 521 (789)
++.
T Consensus 390 ~~~ 392 (719)
T 1z68_A 390 SIG 392 (719)
T ss_dssp ECS
T ss_pred eCC
Confidence 764
No 28
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.81 E-value=5.4e-19 Score=182.28 Aligned_cols=206 Identities=12% Similarity=0.062 Sum_probs=141.1
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC-c
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG-S 649 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~-~ 649 (789)
.+|.+++++++.|. +++.|+||++||++++.....|......|+++||.|+++|+|| +|.+.... .... .
T Consensus 29 ~~g~~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G---~G~s~~~~--~~~~~~ 99 (270)
T 3pfb_A 29 RDGLQLVGTREEPF----GEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNG---HGDSDGKF--ENMTVL 99 (270)
T ss_dssp ETTEEEEEEEEECS----SSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTT---STTSSSCG--GGCCHH
T ss_pred cCCEEEEEEEEcCC----CCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcccc---ccCCCCCC--CccCHH
Confidence 47899999999885 3468999999998876445567778889999999999999998 44332111 1111 2
Q ss_pred ccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCc
Q 003886 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 729 (789)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~ 729 (789)
..++|+.++++++.++ .+.++++|+|||+||++++.++.++|++++++|+.+|.................+.......
T Consensus 100 ~~~~d~~~~i~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
T 3pfb_A 100 NEIEDANAILNYVKTD--PHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPD 177 (270)
T ss_dssp HHHHHHHHHHHHHHTC--TTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTEECCTTSCCS
T ss_pred HHHHhHHHHHHHHHhC--cCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhccccCcccccc
Confidence 2367888899998876 34469999999999999999999999999999999998765432111000000000000000
Q ss_pred cccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 730 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
................+...+....+.++++|+|+++|++|..+|++.+.++++.+++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 235 (270)
T 3pfb_A 178 RLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQN 235 (270)
T ss_dssp EEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSS
T ss_pred cccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCCC
Confidence 0000000001122333444555667889999999999999999999999999998764
No 29
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.80 E-value=2.7e-19 Score=182.93 Aligned_cols=207 Identities=14% Similarity=0.156 Sum_probs=135.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC-cc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG-SQ 650 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~-~~ 650 (789)
+|.+++++++.|++ ..++.|+||++||.+.+.....|......|+++||.|+++|+|| +|.+.... ..+. ..
T Consensus 9 ~g~~l~~~~~~p~~--~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~--~~~~~~~ 81 (251)
T 2wtm_A 9 DGIKLNAYLDMPKN--NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYG---HGKSDGKF--EDHTLFK 81 (251)
T ss_dssp TTEEEEEEEECCTT--CCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTT---STTSSSCG--GGCCHHH
T ss_pred CCcEEEEEEEccCC--CCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCC---CCCCCCcc--ccCCHHH
Confidence 78899999998863 13467999999997765335567777889999999999999998 44432111 1111 12
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCcc
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 730 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (789)
..+|+.++++++.+...+ ++++|+|||+||.+++.++.++|++++++|+.+|...+.............+........
T Consensus 82 ~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 2wtm_A 82 WLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDE 159 (251)
T ss_dssp HHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTTBCCSE
T ss_pred HHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCchhcchH
Confidence 357888888888665323 589999999999999999999999999999999975432211000000000000000000
Q ss_pred ccccCCCC-ChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 731 KDSFTESP-SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 731 ~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
...+.... ...........++...+.++++|+|++||++|..||++.+.++++.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~ 217 (251)
T 2wtm_A 160 LDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKN 217 (251)
T ss_dssp EEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSSS
T ss_pred HhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCCC
Confidence 00000000 0011222223344445678899999999999999999999999988764
No 30
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.80 E-value=3.9e-19 Score=184.38 Aligned_cols=193 Identities=17% Similarity=0.201 Sum_probs=139.8
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCC
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~ 646 (789)
+...+|..+.+++..|....+.++.|+||++|||++.. ....+......|+++||.|+++|+||.+. +.. ..
T Consensus 19 ~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~-s~~------~~ 91 (276)
T 3hxk_A 19 FSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNK-GTN------YN 91 (276)
T ss_dssp CCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTS-CCC------SC
T ss_pred ccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCC-cCC------CC
Confidence 34557888887776664322347889999999977432 34456677889999999999999998532 110 01
Q ss_pred CCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHh-CCCceeEEEEeCCccchhhhhcCCCCCcchh
Q 003886 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGTTDIPDWCY 722 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~-~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~ 722 (789)
.....+.|+.++++++.++. .+|.++|+|+|||+||++++.++.+ .+++++++|+.+|+.++...+.... .
T Consensus 92 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~~--~--- 166 (276)
T 3hxk_A 92 FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSDL--S--- 166 (276)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSSS--S---
T ss_pred cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcch--h---
Confidence 11234789999999998864 2788999999999999999999987 6889999999999887543311110 0
Q ss_pred hhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 723 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
...+. + +.. ...++...+.++.+|+|++||++|..||++++..+++.|++
T Consensus 167 --------~~~~~--~--~~~---~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~ 216 (276)
T 3hxk_A 167 --------HFNFE--I--ENI---SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSK 216 (276)
T ss_dssp --------SSCCC--C--SCC---GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHT
T ss_pred --------hhhcC--c--hhh---hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHH
Confidence 01111 1 111 45677778889999999999999999999999999998864
No 31
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.80 E-value=1.1e-18 Score=187.51 Aligned_cols=212 Identities=16% Similarity=0.183 Sum_probs=144.8
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCC--
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-- 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~-- 644 (789)
.+...+|.+++++++.|.+ .++.|+||++||+++.. ..|.... .++++||.|+++|+||.++.+........
T Consensus 86 ~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~--~~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~ 159 (346)
T 3fcy_A 86 YFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNS--GDWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGVTGNT 159 (346)
T ss_dssp EEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCS--CCSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCCSSCC
T ss_pred EEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCC--CChhhhh-HHHhCCcEEEEEcCCCCCCCCCCCcccCCCC
Confidence 5666789999999999973 56789999999987753 3333222 66799999999999996554432211000
Q ss_pred --C--CCCc----------ccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc-hh
Q 003886 645 --G--KVGS----------QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LA 709 (789)
Q Consensus 645 --~--~~~~----------~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~-~~ 709 (789)
+ ..+. ..++|+.++++++..+..+|.+||+|+|||+||++++.++.++|+ ++++|+.+|... +.
T Consensus 160 ~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~ 238 (346)
T 3fcy_A 160 LNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYK 238 (346)
T ss_dssp SBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHH
T ss_pred cCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHH
Confidence 0 0000 125899999999998877899999999999999999999999987 999999999653 33
Q ss_pred hhhcCC-CCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 710 LMVGTT-DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 710 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
...... ....+.....+... ..............+...++...+.++++|+|+++|++|..||++++.+++++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 315 (346)
T 3fcy_A 239 RVWDLDLAKNAYQEITDYFRL--FDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS 315 (346)
T ss_dssp HHHHTTCCCGGGHHHHHHHHH--HCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS
T ss_pred HHhhccccccchHHHHHHHHh--cCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC
Confidence 222111 11111100000000 00000111223344445666677889999999999999999999999999998863
No 32
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.79 E-value=3e-19 Score=205.95 Aligned_cols=216 Identities=14% Similarity=0.140 Sum_probs=149.3
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC----Cc-hhhHH-HH---HHHHHCCcEEEEEcCCCCCCCCc
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV----SL-SSYSK-SL---AFLSSVGYSLLIVNYRGSLGFGE 637 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~----~~-~~~~~-~~---~~la~~Gy~V~~~d~rGs~G~G~ 637 (789)
.++..||..|+++++.|.+ .+++|+||++||.+... .. ..|.. .. ++|+++||+|+.+|+||+++++.
T Consensus 29 ~i~~~DG~~L~~~~~~P~~---~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEECCCCCEEEEEEEeCCC---CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 5567799999999999974 36789999999844321 11 12222 12 78999999999999999887766
Q ss_pred hhhccCC-----CCCCcccHHHHHHHHHHHHHc-CCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccch-h-
Q 003886 638 EALQSLP-----GKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-A- 709 (789)
Q Consensus 638 ~~~~~~~-----~~~~~~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~-~- 709 (789)
.+....+ +.++..+++|+.++++|+.++ ++.| .||+++|+||||+++++++.+++++++|+|+.+|+.++ .
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~~~~ 184 (615)
T 1mpx_A 106 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMG 184 (615)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCTTTT
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccccccc
Confidence 5532211 222237899999999999998 7766 59999999999999999998889999999999999984 3
Q ss_pred hhhcCC---CCC--cchhhhhccCcc--------cc----------------cc-C-CCCChh-------hHHHHHhcCc
Q 003886 710 LMVGTT---DIP--DWCYVESYGSKG--------KD----------------SF-T-ESPSVE-------DLTRFHSKSP 751 (789)
Q Consensus 710 ~~~~~~---~~~--~~~~~~~~~~~~--------~~----------------~~-~-~~~~~~-------~~~~~~~~sp 751 (789)
..+... ... .|.+........ .+ .+ . ..+.++ ..+.|.+.||
T Consensus 185 ~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~w~~~Sp 264 (615)
T 1mpx_A 185 DDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQAL 264 (615)
T ss_dssp SSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCHHHHTTCH
T ss_pred cccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCcChhhhhcCh
Confidence 111000 000 011000000000 00 00 0 000000 1144667899
Q ss_pred cccCCC--CCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 752 ISHISK--VKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 752 ~~~~~~--i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
+.++++ |++|+|++||.+|.+ ++.++.++|++|++
T Consensus 265 ~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~ 301 (615)
T 1mpx_A 265 DKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEP 301 (615)
T ss_dssp HHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGG
T ss_pred hhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHh
Confidence 999999 999999999999998 88999999999974
No 33
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=1.4e-17 Score=205.53 Aligned_cols=328 Identities=11% Similarity=0.032 Sum_probs=210.6
Q ss_pred ceEEEecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceeccc-------EEEEeCCCCCeEE
Q 003886 97 KAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGA-------SAVVPSPSGSKLL 169 (789)
Q Consensus 97 ~~~~~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~-------~~~~~SPdG~~la 169 (789)
.....+.+||||++|+|...... ......||++++ .+++.++|+..+ ..+ ..++|||||+ |+
T Consensus 53 ~~v~~~~~SPDG~~la~~s~~~~---~~~~~~i~~~d~--~~g~~~~lt~~~-----~~~~~~~~~~~~~~~SpDg~-ll 121 (1045)
T 1k32_A 53 GVINNARFFPDGRKIAIRVMRGS---SLNTADLYFYNG--ENGEIKRITYFS-----GKSTGRRMFTDVAGFDPDGN-LI 121 (1045)
T ss_dssp SEEEEEEECTTSSEEEEEEEEST---TCCEEEEEEEET--TTTEEEECCCCC-----EEEETTEECSEEEEECTTCC-EE
T ss_pred CcccCeEECCCCCEEEEEEeecc---CCCCCeEEEEEC--CCCCeEEcccCC-----CcccccccccccccCCCCCE-EE
Confidence 34567778999999999865421 124568899886 344566776554 334 7899999998 87
Q ss_pred EEecCCC---CCCeEEEEe-cCCceeEEEecC------------------------------------------------
Q 003886 170 VVRNPEN---ESPIQFELW-SQSQLEKEFHVP------------------------------------------------ 197 (789)
Q Consensus 170 ~~~~~~~---~~~~~~~i~-~~~~~~~~~~~~------------------------------------------------ 197 (789)
|+...+. ...++|.+. .+++..+++...
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~ 201 (1045)
T 1k32_A 122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD 201 (1045)
T ss_dssp EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence 8775431 234566665 333322211100
Q ss_pred -----------C-------Cccc--ccc---CC----------CcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCC
Q 003886 198 -----------Q-------TVHG--SVY---AD----------GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 244 (789)
Q Consensus 198 -----------~-------~~~g--~v~---~d----------~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~ 244 (789)
. ...+ .+| .+ ..+..++|||||++|+|..... ...|+......
T Consensus 202 ~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~---i~~~d~~~~~l- 277 (1045)
T 1k32_A 202 MSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGS---IYIFNPDTEKI- 277 (1045)
T ss_dssp CSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTE---EEEECTTTCCE-
T ss_pred CCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCE---EEEecCCceEe-
Confidence 0 0000 111 00 1134678999999999974221 11111100000
Q ss_pred CCCc-----------CCCCCCCcceee-CCcccccCCccCceEEEEEccCCceEeccCCCCCC-ccceEEEeeCCCCCcc
Q 003886 245 SSDK-----------DCNSWKGQGDWE-EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-SVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 245 ~~~~-----------~~~~~~~~~~~~-~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~-~~~~~~wSPDg~~~~~ 311 (789)
.... .+........|+ ||...... .....|+++++.+++.+.+ ..... .+..++|+ ||+.
T Consensus 278 ~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~-~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~s-dg~~--- 350 (1045)
T 1k32_A 278 EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAF-VSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGD-TKVA--- 350 (1045)
T ss_dssp EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEE-EETTEEEEECTTSSBEEEC--SCCSCEEEEEECSS-SEEE---
T ss_pred eeeccCcccccccccccccccceeeecCCCCCEEEE-EEcCEEEEEcCCCCceEEc--cCCCcceEEeeeEc-CCCe---
Confidence 0000 011234456788 88543333 3367899999999988877 33333 67789999 9999
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceE-EEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEe
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALY-AVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s 390 (789)
|+|.+. ...|| ++++ .+++.+.|+.+...+..++|||||++|++.+
T Consensus 351 -l~~~s~---------------~~~l~~~~d~-----------------~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 351 -FIHGTR---------------EGDFLGIYDY-----------------RTGKAEKFEENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp -EEEEET---------------TEEEEEEEET-----------------TTCCEEECCCCCCSEEEEEECTTSSEEEEEE
T ss_pred -EEEEEC---------------CCceEEEEEC-----------------CCCCceEecCCccceeeeEECCCCCEEEEEC
Confidence 998873 23799 8998 6777888885556788999999999999887
Q ss_pred cCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeC-----
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG----- 465 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~----- 465 (789)
.+. .|++||+.++..+.+.... ...+..+.|||||++|++.+...
T Consensus 398 ~~~-----------~v~~~d~~tg~~~~~~~~~-------------------~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 398 DRF-----------EIMTVDLETGKPTVIERSR-------------------EAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp TTS-----------EEEEEETTTCCEEEEEECS-------------------SSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred CCC-----------eEEEEECCCCceEEeccCC-------------------CCCccceEECCCCCeEEEEecCcccccc
Confidence 543 6999999886653222110 01235778999999998877653
Q ss_pred --CeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCC
Q 003886 466 --SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 509 (789)
Q Consensus 466 --~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~ 509 (789)
....|+.+|+.+++...++..........|++||+.|++.....
T Consensus 448 ~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp SCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred CCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 45689999999999888877655445568999999998877543
No 34
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.79 E-value=7.6e-19 Score=191.39 Aligned_cols=177 Identities=15% Similarity=0.135 Sum_probs=140.6
Q ss_pred eeecC-CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH----------HHHHHHHCCcEEEEEcCCCCCCC
Q 003886 567 NLTKG-AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK----------SLAFLSSVGYSLLIVNYRGSLGF 635 (789)
Q Consensus 567 ~~~~~-~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~----------~~~~la~~Gy~V~~~d~rGs~G~ 635 (789)
.+.+. +|..+.++++.|+++++.+++|+||++||+++......... ...+....|+.|+++|++|..++
T Consensus 148 ~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~ 227 (380)
T 3doh_A 148 TFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSW 227 (380)
T ss_dssp EEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCS
T ss_pred eeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcc
Confidence 55667 89999999999998777889999999999876532211111 12234567899999999998888
Q ss_pred CchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCC
Q 003886 636 GEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 715 (789)
Q Consensus 636 G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~ 715 (789)
|..+........+..+.+|+.+++++++++..+|++||+|+|||+||++++.++.++|++|+++|+.+|..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~------- 300 (380)
T 3doh_A 228 STLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV------- 300 (380)
T ss_dssp BTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-------
T ss_pred cccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-------
Confidence 8776543334444667899999999999987789999999999999999999999999999999999987521
Q ss_pred CCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCC-CCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 716 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
..+.++ .+|+|++||++|..||++++.+++++|++
T Consensus 301 -------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~ 336 (380)
T 3doh_A 301 -------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAE 336 (380)
T ss_dssp -------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred -------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHH
Confidence 112223 37999999999999999999999998863
No 35
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.79 E-value=1.9e-18 Score=182.63 Aligned_cols=210 Identities=19% Similarity=0.213 Sum_probs=141.5
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCC--
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-- 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~-- 644 (789)
.+...+|..+.++++.|++ .++.|+||++||++++ ....+. ....|+++||.|+++|+||.++..........
T Consensus 60 ~~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~-~~~~~~-~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~ 134 (318)
T 1l7a_A 60 TYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNAS-YDGEIH-EMVNWALHGYATFGMLVRGQQRSEDTSISPHGHA 134 (318)
T ss_dssp EEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCC-SGGGHH-HHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCS
T ss_pred EEEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCC-CCCCcc-cccchhhCCcEEEEecCCCCCCCCCcccccCCcc
Confidence 4555678899999999973 5678999999998764 123333 33478889999999999996554433210000
Q ss_pred -C--CCC---------cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc-chhhh
Q 003886 645 -G--KVG---------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC-NLALM 711 (789)
Q Consensus 645 -~--~~~---------~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~-~~~~~ 711 (789)
+ ..+ ...++|+.++++++.++..+|.++|+|+|||+||.+++.++.++|+ ++++|+.+|.. ++...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~ 213 (318)
T 1l7a_A 135 LGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERA 213 (318)
T ss_dssp SSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHH
T ss_pred ccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHH
Confidence 0 011 1237899999999999877889999999999999999999999875 77888888864 33332
Q ss_pred hcCCCCCcchhhhhccCccccccCCCC--ChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 712 VGTTDIPDWCYVESYGSKGKDSFTESP--SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
........+.....+.. .. ..+ ...........++...+.++++|+|++||++|..+|++++.++++.++.
T Consensus 214 ~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~ 286 (318)
T 1l7a_A 214 IDVALEQPYLEINSFFR----RN-GSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET 286 (318)
T ss_dssp HHHCCSTTTTHHHHHHH----HS-CCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS
T ss_pred HhcCCcCccHHHHHHHh----cc-CCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC
Confidence 21111111111000000 00 000 0011222333456667888999999999999999999999999999875
No 36
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.78 E-value=6.9e-18 Score=166.90 Aligned_cols=166 Identities=15% Similarity=0.214 Sum_probs=129.1
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCC---CCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP---HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 643 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~---~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~ 643 (789)
.+...+| +++++++.|. ..++.|+||++||++ +......|......|+++||.|+++|+||. |.+...
T Consensus 10 ~~~~~~g-~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~---g~s~~~-- 80 (208)
T 3trd_A 10 LIQGPVG-QLEVMITRPK---GIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGV---GKSQGR-- 80 (208)
T ss_dssp EEECSSS-EEEEEEECCS---SCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTS---TTCCSC--
T ss_pred EEECCCc-eEEEEEEcCC---CCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCC---CCCCCC--
Confidence 4566678 9999999986 345789999999953 332344566677899999999999999984 333211
Q ss_pred CCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhh
Q 003886 644 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 723 (789)
Q Consensus 644 ~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~ 723 (789)
........+|+.++++++.++ .+.++++++|||+||.+++.++ ++| +++++|+.+|..+. +
T Consensus 81 -~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~-----------~--- 141 (208)
T 3trd_A 81 -YDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY-----------E--- 141 (208)
T ss_dssp -CCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS-----------G---
T ss_pred -ccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc-----------C---
Confidence 122344588999999999987 5668999999999999999999 667 89999999887510 0
Q ss_pred hhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 724 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
....+..+++|+|++||++|..+|++++.++++++++
T Consensus 142 ---------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~ 178 (208)
T 3trd_A 142 ---------------------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISS 178 (208)
T ss_dssp ---------------------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSS
T ss_pred ---------------------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccC
Confidence 0123455689999999999999999999999999876
No 37
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=1.6e-18 Score=189.41 Aligned_cols=261 Identities=16% Similarity=0.121 Sum_probs=169.8
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~ 234 (789)
...|+|||||++|||+...+ +..+++.++ .+++..+++...... ...+.|||||++|+|++.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~-g~~~l~~~d~~~~~~~~l~~~~~~~---------~~~~~~spdg~~l~~~~~~------ 101 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFD-GNRNYYLLNLETQQAVQLTEGKGDN---------TFGGFISTDERAFFYVKNE------ 101 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTTEEEECCCSSCBC---------TTTCEECTTSSEEEEEETT------
T ss_pred eecCcCCCCCCEEEEEEecC-CCceEEEEECCCCcEEEeecCCCCc---------cccceECCCCCEEEEEEcC------
Confidence 56789999999999998764 555788777 555555443322111 1348899999999998542
Q ss_pred CccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003886 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (789)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~ 314 (789)
..|+++|+++++.+.+. .... .|+|||+. |+
T Consensus 102 --------------------------------------~~l~~~d~~~~~~~~~~--~~~~-----~~~~~g~~----l~ 132 (396)
T 3c5m_A 102 --------------------------------------LNLMKVDLETLEEQVIY--TVDE-----EWKGYGTW----VA 132 (396)
T ss_dssp --------------------------------------TEEEEEETTTCCEEEEE--ECCT-----TEEEEEEE----EE
T ss_pred --------------------------------------CcEEEEECCCCCcEEEE--eccc-----ccCCCCCE----EE
Confidence 36999999999887773 2111 17777776 66
Q ss_pred EEeec-------------CCceeeeeee--eccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCccee
Q 003886 315 FVGWS-------------SETRKLGIKY--CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 379 (789)
Q Consensus 315 f~~~~-------------~~~~~~g~~~--~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~ 379 (789)
|.... .+.+...... .......||++|+ .+++.+.++........+.|
T Consensus 133 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~-----------------~~g~~~~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 133 NSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDI-----------------ETGELEVIHQDTAWLGHPIY 195 (396)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEET-----------------TTCCEEEEEEESSCEEEEEE
T ss_pred eccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEEC-----------------CCCcEEeeccCCcccccceE
Confidence 64321 1100000000 0023457999998 67777777766666788999
Q ss_pred cC-CCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEE
Q 003886 380 SP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 458 (789)
Q Consensus 380 Sp-DG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l 458 (789)
|| ||++|+|.+.... .....+|+++|+.++..+.++..... ..+..+.|+|||+.|
T Consensus 196 sp~dg~~l~~~~~~~~-----~~~~~~l~~~d~~~~~~~~l~~~~~~------------------~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPH-----DLVDARMWLVNEDGSNVRKIKEHAEG------------------ESCTHEFWIPDGSAM 252 (396)
T ss_dssp ETTEEEEEEEEECSCS-----SSCSCCCEEEETTSCCCEESSCCCTT------------------EEEEEEEECTTSSCE
T ss_pred CCCCCCEEEEEecCCC-----CCCCceEEEEECCCCceeEeeccCCC------------------ccccceEECCCCCEE
Confidence 99 8999999985321 11125799999877654433321000 012346899999999
Q ss_pred EEEEEeCCe--EEEEEEECCCCcEEEecCCCCCceeEEeee-cCCEEEEEEeC------------CCCCCeEEEEeeccc
Q 003886 459 LLSSIWGSS--QVIISVNVSSGELLRITPAESNFSWSLLTL-DGDNIIAVSSS------------PVDVPQVKYGYFVDK 523 (789)
Q Consensus 459 ~~~~~~~~~--~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~-dg~~l~~~~ss------------~~~p~~i~~~~~~~~ 523 (789)
++.+...+. ..|+.+|+.+|+.++++.... .. ..+++ ||+.+++..+. ......|++.++.++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 988877655 449999999999888865443 23 78899 99966664432 012267888887654
No 38
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.78 E-value=9.4e-19 Score=177.20 Aligned_cols=179 Identities=15% Similarity=0.124 Sum_probs=132.7
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhc------
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ------ 641 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~------ 641 (789)
+.. +|..+.++++.|.+ ..++.|+||++||..+. ...+....+.|+++||.|+++|++|.+|.......
T Consensus 11 ~~~-~~~~~~~~~~~p~~--~~~~~p~vv~~HG~~g~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~ 85 (241)
T 3f67_A 11 IPS-QGENMPAYHARPKN--ADGPLPIVIVVQEIFGV--HEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFK 85 (241)
T ss_dssp EEE-TTEEEEEEEEEETT--CCSCEEEEEEECCTTCS--CHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHH
T ss_pred Eec-CCcceEEEEecCCC--CCCCCCEEEEEcCcCcc--CHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHH
Confidence 344 78899999999974 33578999999996553 45677778899999999999999985544322110
Q ss_pred -cCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcc
Q 003886 642 -SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW 720 (789)
Q Consensus 642 -~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~ 720 (789)
...........+|+.++++++.+++ +|.++|+|+|||+||.+++.++.++|+ ++++|+..+..... .
T Consensus 86 ~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~-------~--- 153 (241)
T 3f67_A 86 ELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGE-------K--- 153 (241)
T ss_dssp HTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCC-------C---
T ss_pred HhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCC-------C---
Confidence 0000111234789999999999887 888999999999999999999999887 77777765542100 0
Q ss_pred hhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 721 CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
..+...+|...+.++++|+|++||++|..+|++++.++++.++
T Consensus 154 -----------------------~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~ 196 (241)
T 3f67_A 154 -----------------------SLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALR 196 (241)
T ss_dssp -----------------------CSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHH
T ss_pred -----------------------ccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHH
Confidence 0011234455677889999999999999999999999999874
No 39
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.77 E-value=5.2e-18 Score=175.99 Aligned_cols=188 Identities=17% Similarity=0.189 Sum_probs=137.0
Q ss_pred CCCeeEEEEEEecCC---CCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCC
Q 003886 571 GAQKPFEAIFVSSSH---KKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~---~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~ 646 (789)
.+|..+.+.++.|+. +...++.|+||++|||++.. ....|......|+++||.|+++|+||.+..+.
T Consensus 11 ~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~--------- 81 (277)
T 3bxp_A 11 TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS--------- 81 (277)
T ss_dssp STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC---------
T ss_pred cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc---------
Confidence 356778888998872 23456789999999976432 33456677888999999999999998431111
Q ss_pred CCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhC--------------CCceeEEEEeCCccchh
Q 003886 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------------PDKFVAAAARNPLCNLA 709 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~--------------p~~~~a~v~~~pv~~~~ 709 (789)
.....++|+.++++++.++. .+|.++|+|+|||+||++++.++.++ +.+++++|+.+|..++.
T Consensus 82 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~ 161 (277)
T 3bxp_A 82 VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLT 161 (277)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTT
T ss_pred cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCC
Confidence 11245789999999998762 26788999999999999999999885 67899999999987643
Q ss_pred hhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 710 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
..+.. ...+... +.. .+...+|...+.++.+|+|++||++|..||++++.++++.|++
T Consensus 162 ~~~~~----~~~~~~~--------~~~--------~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~ 219 (277)
T 3bxp_A 162 AGFPT----TSAARNQ--------ITT--------DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQ 219 (277)
T ss_dssp SSSSS----SHHHHHH--------HCS--------CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHH
T ss_pred CCCCC----ccccchh--------ccc--------hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHH
Confidence 21100 0000000 000 1234567777888899999999999999999999999988753
No 40
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.77 E-value=1.9e-18 Score=180.04 Aligned_cols=190 Identities=16% Similarity=0.159 Sum_probs=134.9
Q ss_pred eecCCCeeEEEEEEecCCC---CCCCCCcEEEEEcCCCCC-CCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccC
Q 003886 568 LTKGAQKPFEAIFVSSSHK---KDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 643 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~---~~~~~~P~vv~~HGg~~~-~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~ 643 (789)
+...+|..+...+| |+.. ...++.|+||++|||++. .....|......|+++||.|+++|+||.+..+
T Consensus 24 ~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~------- 95 (283)
T 3bjr_A 24 KQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ------- 95 (283)
T ss_dssp EEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS-------
T ss_pred EeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc-------
Confidence 34445655666677 6531 145678999999997743 23345667788899999999999999854432
Q ss_pred CCCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhCCCc-------------eeEEEEeCCccc
Q 003886 644 PGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK-------------FVAAAARNPLCN 707 (789)
Q Consensus 644 ~~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~p~~-------------~~a~v~~~pv~~ 707 (789)
........|+.++++++.+.. .+|.++|+|+|||+||++++.++.++|++ ++++|+.+|..+
T Consensus 96 --~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~ 173 (283)
T 3bjr_A 96 --PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVIS 173 (283)
T ss_dssp --SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCC
T ss_pred --cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccc
Confidence 011234788999999998753 36778999999999999999999999987 899999999876
Q ss_pred hhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 708 LALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
+...+.... . ....+.. .+...++...+.++.+|+|++||++|..+|++++.++++.+++
T Consensus 174 ~~~~~~~~~-------~-----~~~~~~~--------~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~ 233 (283)
T 3bjr_A 174 PLLGFPKDD-------A-----TLATWTP--------TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALAT 233 (283)
T ss_dssp TTSBC--------------------CCCC--------CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHH
T ss_pred ccccccccc-------c-----hHHHHHH--------HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHH
Confidence 432110000 0 0001111 1234566777888999999999999999999999999998753
No 41
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.77 E-value=9.9e-19 Score=202.31 Aligned_cols=214 Identities=12% Similarity=0.142 Sum_probs=148.6
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-----Cc-hhhHHH---H-HHHHHCCcEEEEEcCCCCCCCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-----SL-SSYSKS---L-AFLSSVGYSLLIVNYRGSLGFG 636 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-----~~-~~~~~~---~-~~la~~Gy~V~~~d~rGs~G~G 636 (789)
.++..||..|+++++.|.+ .+++|+||++||..... .. ..|... . ++|+++||+|+.+|+||+++++
T Consensus 41 ~i~~~DG~~L~~~l~~P~~---~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 41 MVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEECCCCcEEEEEEEecCC---CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 4567799999999999974 36789999999743220 00 112111 2 8899999999999999998887
Q ss_pred chhhccC--CCCCC---cccHHHHHHHHHHHHHc-CCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhh
Q 003886 637 EEALQSL--PGKVG---SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (789)
Q Consensus 637 ~~~~~~~--~~~~~---~~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~ 710 (789)
..+.... .+.++ ..+++|+.++++|+.++ ++.| .||+++|+||||++++.++++++++++|+|+.+|+.|+..
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~~~ 196 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWM 196 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCTTT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccccc
Confidence 7654321 11233 47899999999999999 8777 5999999999999999999888999999999999988632
Q ss_pred --hh---cCCCCC--cchhhhhcc-Cc-----------c---c--------------------cccCCCCChhhHHHHHh
Q 003886 711 --MV---GTTDIP--DWCYVESYG-SK-----------G---K--------------------DSFTESPSVEDLTRFHS 748 (789)
Q Consensus 711 --~~---~~~~~~--~~~~~~~~~-~~-----------~---~--------------------~~~~~~~~~~~~~~~~~ 748 (789)
.+ +..... .|....... .. + + ..+...+. ..+.|.+
T Consensus 197 ~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~d~yw~~ 274 (652)
T 2b9v_A 197 GDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPA--YDAFWQG 274 (652)
T ss_dssp BSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCS--SSHHHHT
T ss_pred ccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCC--CChHHhc
Confidence 11 000010 011000000 00 0 0 00000010 1134567
Q ss_pred cCccccCCC--CCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 749 KSPISHISK--VKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 749 ~sp~~~~~~--i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.||..++++ |++|+|++||.+|.+ +..++.++|++|++
T Consensus 275 ~Sp~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~ 314 (652)
T 2b9v_A 275 QALDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKD 314 (652)
T ss_dssp TCHHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHH
T ss_pred CChhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHh
Confidence 899889999 999999999999998 77899999999873
No 42
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.76 E-value=2.5e-17 Score=168.05 Aligned_cols=167 Identities=17% Similarity=0.275 Sum_probs=129.3
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCC---CCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPH---SVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 643 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~---~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~ 643 (789)
.+...+| .+.++++.|. +++.|+||++||.+. ......|......|+++||.|+++|+||. |.+...
T Consensus 27 ~~~~~~g-~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~---G~s~~~-- 96 (249)
T 2i3d_A 27 IFNGPAG-RLEGRYQPSK----EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSI---GRSQGE-- 96 (249)
T ss_dssp EEEETTE-EEEEEEECCS----STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTS---TTCCSC--
T ss_pred EEECCCc-eEEEEEEcCC----CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCC---CCCCCC--
Confidence 4455566 8999999884 357899999999643 21223456677889999999999999984 333211
Q ss_pred CCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhh
Q 003886 644 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 723 (789)
Q Consensus 644 ~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~ 723 (789)
.......++|+.++++++.++. .+.++++++|||+||++++.++.++|+ ++++|+.+|..+...
T Consensus 97 -~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~------------- 160 (249)
T 2i3d_A 97 -FDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD------------- 160 (249)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-------------
T ss_pred -CCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-------------
Confidence 1123345689999999998875 477899999999999999999999998 999999998764200
Q ss_pred hhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 724 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
...+.++++|+|+++|++|..+|++++.++++.++.
T Consensus 161 ----------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 196 (249)
T 2i3d_A 161 ----------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKT 196 (249)
T ss_dssp ----------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTT
T ss_pred ----------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhh
Confidence 123557889999999999999999999999998873
No 43
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.76 E-value=2.4e-17 Score=176.44 Aligned_cols=208 Identities=16% Similarity=0.139 Sum_probs=139.7
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~ 646 (789)
.+...+|..+.+.++.|. +.+.|+||++||++.+ ...|......|+++||.|+++|+|| +|.+........
T Consensus 39 ~~~~~dg~~l~~~~~~p~----~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~~~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVG---HGQSEGERMVVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHTTTEEEEEECCTT---STTSCSSTTCCS
T ss_pred eEEccCCeEEEEEEeCCC----CCCCcEEEEECCCCcc--cchHHHHHHHHHhCCCeEEEEcCCC---CcCCCCcCCCcC
Confidence 456678999999999885 4567999999997764 4577788889999999999999998 444432211111
Q ss_pred CCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCc--chhhh
Q 003886 647 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD--WCYVE 724 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~--~~~~~ 724 (789)
.....++|+.++++++..+ .+.++|+|+|||+||++++.++.++|++++++|+.+|........... ... ..+..
T Consensus 110 ~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~ 186 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATT-FKVLAAKVLN 186 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSH-HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhH-HHHHHHHHHH
Confidence 2223378999999999887 567799999999999999999999999999999999976542110000 000 00000
Q ss_pred hccC-c----cccccCCCCChhhHHHHHh---------------------cCccccCCCCCCCEEEEEeCCCCCCChHHH
Q 003886 725 SYGS-K----GKDSFTESPSVEDLTRFHS---------------------KSPISHISKVKTPTIFLLGAQDLRVPVSNG 778 (789)
Q Consensus 725 ~~~~-~----~~~~~~~~~~~~~~~~~~~---------------------~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~ 778 (789)
.+.. . ....+.. ........+.. .+....+.++++|+|+++|++|..+|++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~ 265 (342)
T 3hju_A 187 LVLPNLSLGPIDSSVLS-RNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGA 265 (342)
T ss_dssp HHCTTCBCCCCCGGGSC-SCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHH
T ss_pred HhccccccCcccccccc-cchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHH
Confidence 0000 0 0000000 00111111110 011244778999999999999999999999
Q ss_pred HHHHHHCCC
Q 003886 779 LQVIYHIPF 787 (789)
Q Consensus 779 ~~l~~~l~~ 787 (789)
.++++.++.
T Consensus 266 ~~~~~~~~~ 274 (342)
T 3hju_A 266 YLLMELAKS 274 (342)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHHcCC
Confidence 999999873
No 44
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=1e-16 Score=166.59 Aligned_cols=250 Identities=14% Similarity=0.163 Sum_probs=165.8
Q ss_pred EEEecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCC
Q 003886 99 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENES 178 (789)
Q Consensus 99 ~~~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~ 178 (789)
.....+||||+++++.. ...++++++.+. ++..++.... ....+..++|||||++|++.....++.
T Consensus 44 v~~~~~spdg~~l~~~~----------~~~i~~~d~~~~-~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS----------EGLLYRLSLAGD-PSPEKVDTGF---ATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp CEEEEECTTSSEEEEEE----------TTEEEEEESSSC-CSCEECCCTT---CCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred eEeeEECCCCCEEEEEc----------CCeEEEEeCCCC-CCceEecccc---ccccccceEECCCCCEEEEEEeCCCCc
Confidence 33455689999998852 236888876431 3333333221 013466789999999999998655456
Q ss_pred CeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcc
Q 003886 179 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (789)
Q Consensus 179 ~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (789)
..+|.+. .+++...+.. .... ..+.|||||++|+|++...
T Consensus 110 ~~l~~~~~~~~~~~~~~~-~~~~----------~~~~~spdg~~l~~~~~~~---------------------------- 150 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTK-NLPS----------YWHGWSPDGKSFTYCGIRD---------------------------- 150 (297)
T ss_dssp CEEEEEETTCCCCEECCS-SSSE----------EEEEECTTSSEEEEEEEET----------------------------
T ss_pred ceEEEEECCCCceEEeec-CCCc----------cceEECCCCCEEEEEECCC----------------------------
Confidence 6788887 4444333222 1112 5789999999999876532
Q ss_pred eeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcce
Q 003886 258 DWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (789)
Q Consensus 258 ~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l 337 (789)
+...||.+++.+++.+.+ ......+..+.|+|||+. |++.+... ....|
T Consensus 151 -------------~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l~~~~~~~------------~~~~i 199 (297)
T 2ojh_A 151 -------------QVFDIYSMDIDSGVETRL--THGEGRNDGPDYSPDGRW----IYFNSSRT------------GQMQI 199 (297)
T ss_dssp -------------TEEEEEEEETTTCCEEEC--CCSSSCEEEEEECTTSSE----EEEEECTT------------SSCEE
T ss_pred -------------CceEEEEEECCCCcceEc--ccCCCccccceECCCCCE----EEEEecCC------------CCccE
Confidence 225788888888888877 444556788999999998 88877322 23478
Q ss_pred EEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCC
Q 003886 338 YAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 417 (789)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~ 417 (789)
|.+++ .++..+.++.+......+.|||||++|++.+.+......+.....+|+++|+.+++..
T Consensus 200 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 200 WRVRV-----------------DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp EEEET-----------------TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred EEECC-----------------CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 88887 6677788887777778899999999999998764211000012357999999876543
Q ss_pred CcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCC
Q 003886 418 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (789)
Q Consensus 418 ~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (789)
.+. .+... ...+..+.|+|||+.|++.+...+
T Consensus 263 ~~~-------~~~~~----------~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 263 TLF-------DLFGG----------QGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp EEE-------EEEES----------TTTSCSCCBCTTSSEEEEEEECCC
T ss_pred eee-------ccCCC----------CcccccceECCCCCEEEEEEeccC
Confidence 221 11000 013457889999999988876543
No 45
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.75 E-value=4.7e-17 Score=169.86 Aligned_cols=208 Identities=17% Similarity=0.147 Sum_probs=137.5
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~ 646 (789)
.+...+|..++++++.|. +++.|+||++||.+.+ ...|......|+++||.|+++|+|| +|.+........
T Consensus 21 ~~~~~~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~~~~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVG---HGQSEGERMVVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTT---STTSCSSTTCCS
T ss_pred eEecCCCeEEEEEEeccC----CCCCeEEEEECCCCch--hhHHHHHHHHHHhCCCcEEEeCCCC---CCCCCCCCCCCC
Confidence 456678999999999875 4568999999997664 5578888889999999999999998 444432211111
Q ss_pred CCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCC-cchhhhh
Q 003886 647 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIP-DWCYVES 725 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~-~~~~~~~ 725 (789)
.....++|+.++++++..+ .+..+++++|||+||.+++.++.++|++++++|+.+|.............. .......
T Consensus 92 ~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNS 169 (303)
T ss_dssp STHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHH
Confidence 1223368888899988877 456799999999999999999999999999999999976542110000000 0000000
Q ss_pred ccC----c-cccccCCCCChhhHHHHHh---------------------cCccccCCCCCCCEEEEEeCCCCCCChHHHH
Q 003886 726 YGS----K-GKDSFTESPSVEDLTRFHS---------------------KSPISHISKVKTPTIFLLGAQDLRVPVSNGL 779 (789)
Q Consensus 726 ~~~----~-~~~~~~~~~~~~~~~~~~~---------------------~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~ 779 (789)
+.. . ...... .........+.. ......+.++++|+|+++|++|..+|++.+.
T Consensus 170 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 248 (303)
T 3pe6_A 170 VLPNLSSGPIDSSVL-SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAY 248 (303)
T ss_dssp TCCSCCCCCCCGGGT-CSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHH
T ss_pred hcccccCCccchhhh-hcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHH
Confidence 000 0 000000 000011111110 0112346788999999999999999999999
Q ss_pred HHHHHCC
Q 003886 780 QVIYHIP 786 (789)
Q Consensus 780 ~l~~~l~ 786 (789)
++++.++
T Consensus 249 ~~~~~~~ 255 (303)
T 3pe6_A 249 LLMELAK 255 (303)
T ss_dssp HHHHHCC
T ss_pred HHHHhcc
Confidence 9999986
No 46
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.75 E-value=7.5e-18 Score=173.25 Aligned_cols=178 Identities=15% Similarity=0.184 Sum_probs=134.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~-~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
++..+...++.|.+ ++.|+||++|||++. .....|......|+++||.|+++|+||++.+. ...
T Consensus 47 ~~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~-----------~~~ 111 (262)
T 2pbl_A 47 EGDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR-----------ISE 111 (262)
T ss_dssp SSTTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC-----------HHH
T ss_pred CCCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCC-----------hHH
Confidence 34445566777862 678999999997632 34456666778899999999999999854321 122
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC------CCceeEEEEeCCccchhhhhcCCCCCcchhhh
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 724 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~------p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~ 724 (789)
..+|+.++++++..+.. ++++|+|||+||++++.++.++ +++++++|+.+|+.++..+.... ...
T Consensus 112 ~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~------~~~ 182 (262)
T 2pbl_A 112 ITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS------MNE 182 (262)
T ss_dssp HHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST------THH
T ss_pred HHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhh------hhh
Confidence 37899999999988742 7899999999999999999887 88999999999988754332110 000
Q ss_pred hccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 725 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
.+ . .....+...+|...+.++++|+|++||++|..||++++.++++.++
T Consensus 183 ~~---------~----~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~ 231 (262)
T 2pbl_A 183 KF---------K----MDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD 231 (262)
T ss_dssp HH---------C----CCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT
T ss_pred hh---------C----CCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC
Confidence 00 0 1123455678888888999999999999999999999999998864
No 47
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.74 E-value=5.9e-17 Score=175.29 Aligned_cols=210 Identities=13% Similarity=0.074 Sum_probs=140.8
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH-HHHHHHHCCcEEEEEcCCCCCCCCchhhccCCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 645 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~ 645 (789)
.+.+.||..+.++++.|.+ .+.++.|+||++||+++. ...|.. ....|+++||.|+++|+||.+ .+.......
T Consensus 72 ~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g---~s~~~~~~~ 145 (367)
T 2hdw_A 72 TFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAV--KEQSSGLYAQTMAERGFVTLAFDPSYTG---ESGGQPRNV 145 (367)
T ss_dssp EEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCC--TTSHHHHHHHHHHHTTCEEEEECCTTST---TSCCSSSSC
T ss_pred EEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCc--chhhHHHHHHHHHHCCCEEEEECCCCcC---CCCCcCccc
Confidence 4566788999999999975 235678999999997764 344443 677899999999999999843 322111111
Q ss_pred CCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhh-cCCC--------
Q 003886 646 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-GTTD-------- 716 (789)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~-~~~~-------- 716 (789)
......++|+.++++++.++..+|.++|+|+|||+||++++.++.++| +++++|+.+|+....... +...
T Consensus 146 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 224 (367)
T 2hdw_A 146 ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRT 224 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHHH
Confidence 112345789999999999988788899999999999999999999988 699999999863211100 0000
Q ss_pred ------------------------CC---c---c---hhhhhccCc-c-ccc---cCCCCChhhHHHHHhcCccccCCCC
Q 003886 717 ------------------------IP---D---W---CYVESYGSK-G-KDS---FTESPSVEDLTRFHSKSPISHISKV 758 (789)
Q Consensus 717 ------------------------~~---~---~---~~~~~~~~~-~-~~~---~~~~~~~~~~~~~~~~sp~~~~~~i 758 (789)
.+ . . .....+... . ... ............+...++...+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 304 (367)
T 2hdw_A 225 RTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEI 304 (367)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGG
T ss_pred HHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhh
Confidence 00 0 0 000000000 0 000 0000001224455566777788899
Q ss_pred C-CCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 759 K-TPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 759 ~-~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
+ +|+|++||++|. ++.++.++++..
T Consensus 305 ~~~PvLii~G~~D~--~~~~~~~~~~~~ 330 (367)
T 2hdw_A 305 SPRPILLIHGERAH--SRYFSETAYAAA 330 (367)
T ss_dssp TTSCEEEEEETTCT--THHHHHHHHHHS
T ss_pred cCCceEEEecCCCC--CHHHHHHHHHhC
Confidence 9 999999999999 889999998863
No 48
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.74 E-value=9.5e-18 Score=169.17 Aligned_cols=171 Identities=19% Similarity=0.189 Sum_probs=128.9
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhcc----
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQS---- 642 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~---- 642 (789)
.+...+|..+.++++.|. +++.|+||++||.++. ...|......|+++||.|+++|+||.+..+......
T Consensus 7 ~~~~~~g~~l~~~~~~p~----~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 80 (236)
T 1zi8_A 7 SIQSYDGHTFGALVGSPA----KAPAPVIVIAQDIFGV--NAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (236)
T ss_dssp CEECTTSCEECEEEECCS----SCSEEEEEEECCTTBS--CHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHH
T ss_pred EEecCCCCeEEEEEECCC----CCCCCEEEEEcCCCCC--CHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhh
Confidence 455668899999999985 3678999999997654 446777788999999999999999754333211000
Q ss_pred -------CCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCC
Q 003886 643 -------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 715 (789)
Q Consensus 643 -------~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~ 715 (789)
..........+|+.++++++.++..++ ++|+|+|||+||++++.++.++| ++++++.+|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------- 150 (236)
T 1zi8_A 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------- 150 (236)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG-------
T ss_pred hhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc-------
Confidence 000011223678899999998775444 79999999999999999999987 8999887774210
Q ss_pred CCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 716 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
++...+.++++|+|+++|++|..+|++++.++++.+++
T Consensus 151 ----------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 188 (236)
T 1zi8_A 151 ----------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGA 188 (236)
T ss_dssp ----------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTT
T ss_pred ----------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHh
Confidence 12234567889999999999999999999999998853
No 49
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=1.5e-17 Score=192.00 Aligned_cols=234 Identities=16% Similarity=0.089 Sum_probs=159.3
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~ 234 (789)
.+...++||||++|||++..+ +..++|.+ .+++.++++.... +.+ ..+.|||| +|+|.+....
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~-g~~~lw~~-~~g~~~~lt~~~~---~~~------~~~~~spd--~~l~~~~~~~---- 85 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSE-GSVNAYLY-DGGETVKLNREPI---NSV------LDPHYGVG--RVILVRDVSK---- 85 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEET-TEEEEEEE-ETTEEEECCSSCC---SEE------CEECTTCS--EEEEEEECST----
T ss_pred chheeecCCCCCeEEEEEccC-CceeEEEE-cCCCcEeeecccc---ccc------ccccCCCC--eEEEEeccCC----
Confidence 377889999999999998754 44556665 5666666554321 122 68999999 6888765310
Q ss_pred CccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEc--cCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003886 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (789)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~--~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (789)
+.....||.+++ .++.. .+. ... .....+|||||+.
T Consensus 86 ----------------------------------g~~~~~l~~~~~~~~g~~~-~l~--~~~-~~~~~~~s~dg~~---- 123 (582)
T 3o4h_A 86 ----------------------------------GAEQHALFKVNTSRPGEEQ-RLE--AVK-PMRILSGVDTGEA---- 123 (582)
T ss_dssp ----------------------------------TSCCEEEEEEETTSTTCCE-ECT--TSC-SBEEEEEEECSSC----
T ss_pred ----------------------------------CCcceEEEEEeccCCCccc-ccc--CCC-CceeeeeCCCCCe----
Confidence 002357999998 55544 552 222 2346799999999
Q ss_pred EEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecC
Q 003886 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (789)
Q Consensus 313 l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~ 392 (789)
++|++...+ .+.++|+ ++++.++|+.... ..++|||||++|++.+.+
T Consensus 124 ~~~~s~~~~--------------~~~l~d~-----------------~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 124 VVFTGATED--------------RVALYAL-----------------DGGGLRELARLPG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp EEEEEECSS--------------CEEEEEE-----------------ETTEEEEEEEESS--CEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCC--------------CceEEEc-----------------cCCcEEEeecCCC--ceEEECCCCCEEEEEEEc
Confidence 999874322 3446687 6777788876544 789999999999998876
Q ss_pred CCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003886 393 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (789)
Q Consensus 393 ~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (789)
.. ....|+++|+.+++.+.++..... ...+.|||||+.|+ .+...+...||+
T Consensus 171 ~~-------~~~~i~~~d~~~g~~~~l~~~~~~--------------------~~~~~~SpDG~~l~-~~~~~~~~~i~~ 222 (582)
T 3o4h_A 171 GG-------GRVSLFTSNLSSGGLRVFDSGEGS--------------------FSSASISPGMKVTA-GLETAREARLVT 222 (582)
T ss_dssp ET-------TEEEEEEEETTTCCCEEECCSSCE--------------------EEEEEECTTSCEEE-EEECSSCEEEEE
T ss_pred CC-------CCeEEEEEcCCCCCceEeecCCCc--------------------cccceECCCCCEEE-EccCCCeeEEEE
Confidence 41 234699999988776554432211 23568999999887 556667778999
Q ss_pred EECCCCcEEEecCCC-CCceeEE--------eeecCCEEEEEEeCCC
Q 003886 473 VNVSSGELLRITPAE-SNFSWSL--------LTLDGDNIIAVSSSPV 510 (789)
Q Consensus 473 ~dl~tg~~~~lt~~~-~~~~~~~--------~s~dg~~l~~~~ss~~ 510 (789)
+|+++|+.+ ++... ....... |++|| .++++.+...
T Consensus 223 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g 267 (582)
T 3o4h_A 223 VDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREG 267 (582)
T ss_dssp ECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETT
T ss_pred EcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCC
Confidence 999999988 44433 2223335 89999 6777665543
No 50
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=2.8e-17 Score=192.90 Aligned_cols=272 Identities=14% Similarity=0.115 Sum_probs=173.1
Q ss_pred cccEEEEeCCCCCeEEEEec--CCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeec--CCCCE-EEEEeec
Q 003886 154 TGASAVVPSPSGSKLLVVRN--PENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN--SDETL-IAYVAEE 228 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wS--pDg~~-la~~~~~ 228 (789)
..+..|++||| +++|++. .+++...+|.+..+++.++++.....+...+...+ -..+.|| |||++ |+|+...
T Consensus 24 ~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 24 GRPACVGAVGD--EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYS-GFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp SCCEEEEEETT--EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTC-CCCEEEECCSSSSCEEEEEBTT
T ss_pred CccceeEEcCC--eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccC-CccceeeeecCCCeEEEEEECC
Confidence 35788999965 7888876 33344455555445555554433222211110000 0145565 99999 9987432
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEcc--C-CceEeccCCC---CCCccceEEE
Q 003886 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--S-GEVQAVKGIP---KSLSVGQVVW 302 (789)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~--~-g~~~~l~~~~---~~~~~~~~~w 302 (789)
...||+++++ + ++.++++..+ ....+..++|
T Consensus 101 -------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 101 -------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp -------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEE
T ss_pred -------------------------------------------CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEE
Confidence 2569999998 5 8888884222 2345678999
Q ss_pred eeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCC------CCeeecC-CCCCccC
Q 003886 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED------LPVVNLT-ESISSAF 375 (789)
Q Consensus 303 SPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~------~~~~~Lt-~~~~~~~ 375 (789)
||||+. |+|++....... .......||++|+ ++ ++.++|+ .+.....
T Consensus 138 spDg~~----l~~~~~~~~~~~-----~~~~~~~i~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~~~ 191 (662)
T 3azo_A 138 LPERGE----VWCMAEEFTGEG-----PSDVRRFLAAVPL-----------------DGSAAADRSAVRELSDDAHRFVT 191 (662)
T ss_dssp ETTTTE----EEEEEEEECSSS-----TTCEEEEEEEEET-----------------TSTTTTCGGGSEESSCSCSSEEC
T ss_pred CCCCCE----EEEEEecccCCC-----CCCceeEEEEEEC-----------------CCCccccCCceeEEEecCCCccc
Confidence 999999 999885321000 0012247999998 55 6788888 7666788
Q ss_pred cceecCCCCEEEEEecCCCCCCCCccccceeEEeecCC-C---CCCCcccceeeEEeeeeccCCCCCccccccCCCCCcc
Q 003886 376 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT-N---GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 451 (789)
Q Consensus 376 ~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~-~---~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~w 451 (789)
.|+|||||++|+|.+.... +......+|+++|+.+ + ..+.++... ...+..+.|
T Consensus 192 ~~~~SpDG~~la~~~~~~~---~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-------------------~~~~~~~~~ 249 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHP---RMPWEGTELKTARVTEDGRFADTRTLLGGP-------------------EEAIAQAEW 249 (662)
T ss_dssp CCEECTTSSEEEEEEECTT---CCTTTCEEEEEEEECTTSCEEEEEEEEEET-------------------TBCEEEEEE
T ss_pred CceECCCCCEEEEEECCCC---CCCCCCcEEEEEEECCCCcccccEEeCCCC-------------------CceEcceEE
Confidence 9999999999999986542 1111235799999983 4 222221110 012346789
Q ss_pred ccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCc---------eeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 452 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNF---------SWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 452 s~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~---------~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
+|||+ ++|++..++..+||++|+++|+.++++...... ....+++++. ++++.+. .-..|+++++.+
T Consensus 250 spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~--~~~~l~~~d~~~ 325 (662)
T 3azo_A 250 APDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK--GAAVLGILDPES 325 (662)
T ss_dssp CTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS--SSCEEEEEETTT
T ss_pred CCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-EEEEEEc--CccEEEEEECCC
Confidence 99999 888887777779999999999999988754422 1234445544 6666665 456788888654
Q ss_pred c
Q 003886 523 K 523 (789)
Q Consensus 523 ~ 523 (789)
+
T Consensus 326 ~ 326 (662)
T 3azo_A 326 G 326 (662)
T ss_dssp T
T ss_pred C
Confidence 3
No 51
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.74 E-value=1.3e-16 Score=163.93 Aligned_cols=205 Identities=17% Similarity=0.223 Sum_probs=133.1
Q ss_pred ecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
...+|..+....+.+. ..+.|+||++||++.+.....+......|+++||.|+++|+||. |.+.. ...
T Consensus 18 ~~~~g~~l~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~-----~~~ 85 (270)
T 3llc_A 18 QGSDARSIAALVRAPA----QDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGH---GASGG-----AFR 85 (270)
T ss_dssp SGGGCEEEEEEEECCS----STTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTS---TTCCS-----CGG
T ss_pred eccCcceEEEEeccCC----CCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccC---CCCCC-----ccc
Confidence 4457888887766653 23479999999987654333344466778889999999999984 43321 112
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHh---CC---CceeEEEEeCCccchhhhhcCCCCCcchh
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ---AP---DKFVAAAARNPLCNLALMVGTTDIPDWCY 722 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~---~p---~~~~a~v~~~pv~~~~~~~~~~~~~~~~~ 722 (789)
...++++.+.+..+++. +..++++|+|||+||.+++.++.+ +| ++++++|+.+|..++..............
T Consensus 86 ~~~~~~~~~d~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 163 (270)
T 3llc_A 86 DGTISRWLEEALAVLDH--FKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRER 163 (270)
T ss_dssp GCCHHHHHHHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHH
T ss_pred cccHHHHHHHHHHHHHH--hccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhh
Confidence 23344544444444443 236789999999999999999999 99 99999999999877644221111110000
Q ss_pred ---hhhccCccccccCCCC---ChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 723 ---VESYGSKGKDSFTESP---SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 723 ---~~~~~~~~~~~~~~~~---~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
...........+...+ .......+........+.++++|+|++||++|..||++++.++++.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~ 234 (270)
T 3llc_A 164 AELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPA 234 (270)
T ss_dssp HHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCS
T ss_pred hhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC
Confidence 0000000000111111 1123344445555667889999999999999999999999999998875
No 52
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.74 E-value=9.6e-17 Score=198.16 Aligned_cols=180 Identities=9% Similarity=0.022 Sum_probs=125.1
Q ss_pred CceEEEEEccCCceEeccCCC---------CCCccceEEEe-eCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEe
Q 003886 272 QPSLFVININSGEVQAVKGIP---------KSLSVGQVVWA-PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVR 341 (789)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~---------~~~~~~~~~wS-PDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d 341 (789)
...|++||++++++..+.+.. ....+..++|| |||+. |+|.+. ..|+.++
T Consensus 264 ~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~----la~~~~----------------~~i~~~~ 323 (1045)
T 1k32_A 264 GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDL----IAFVSR----------------GQAFIQD 323 (1045)
T ss_dssp TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGC----EEEEET----------------TEEEEEC
T ss_pred CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCE----EEEEEc----------------CEEEEEc
Confidence 445666666555444432100 01146789999 99999 999871 2689999
Q ss_pred cccccchhhhhhhhcCCCCCCCeeecCCCCC-ccCcceecCCCCEEEEEecCCCCCCCCccccceeE-EeecCCCCCCCc
Q 003886 342 VSLYKSEASELELKESSSEDLPVVNLTESIS-SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLH-RIDWPTNGNFSS 419 (789)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~-~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~-~~d~~~~~~~~~ 419 (789)
+ .++..+.++.+.. ....++|| ||+.|++.+.+ .+|| ++|+.++..+.+
T Consensus 324 ~-----------------~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~-----------~~l~~~~d~~~~~~~~l 374 (1045)
T 1k32_A 324 V-----------------SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTRE-----------GDFLGIYDYRTGKAEKF 374 (1045)
T ss_dssp T-----------------TSSBEEECSCCSCEEEEEECSS-SEEEEEEEETT-----------EEEEEEEETTTCCEEEC
T ss_pred C-----------------CCCceEEccCCCcceEEeeeEc-CCCeEEEEECC-----------CceEEEEECCCCCceEe
Confidence 8 6677777877766 78899999 99999998852 3699 999887654433
Q ss_pred ccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC-CCCceeEEeeec
Q 003886 420 LEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLD 498 (789)
Q Consensus 420 t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~-~~~~~~~~~s~d 498 (789)
+ ... ..+..+.|||||+.|++... + ..|+.+|+.+|+.+.+... .+.+....|+||
T Consensus 375 ~-~~~-------------------~~~~~~~~SpDG~~la~~~~-~--~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 375 E-ENL-------------------GNVFAMGVDRNGKFAVVAND-R--FEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp C-CCC-------------------CSEEEEEECTTSSEEEEEET-T--SEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred c-CCc-------------------cceeeeEECCCCCEEEEECC-C--CeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 3 110 02235689999998887643 2 3788999999999888743 334455789999
Q ss_pred CCEEEEEEeCC------CCCCeEEEEeeccc
Q 003886 499 GDNIIAVSSSP------VDVPQVKYGYFVDK 523 (789)
Q Consensus 499 g~~l~~~~ss~------~~p~~i~~~~~~~~ 523 (789)
|++|++..... ..+..+++.++.++
T Consensus 432 G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 432 SRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp SCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 99998887654 34567888887543
No 53
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.74 E-value=9e-17 Score=160.20 Aligned_cols=164 Identities=13% Similarity=0.104 Sum_probs=125.2
Q ss_pred eeecCCCeeEEEEEEecCCCCCC--CCCcEEEEEcCCCC---CCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhc
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDC--SCDPLIVVLHGGPH---SVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ 641 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~--~~~P~vv~~HGg~~---~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~ 641 (789)
.+...+| .+.++++.|.+ . ++.|+||++||++. ......|......|+++||.|+++|+||. |.+...
T Consensus 14 ~~~~~~g-~~~~~~~~p~~---~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~---g~s~~~ 86 (220)
T 2fuk_A 14 TLDGPVG-PLDVAVDLPEP---DVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSV---GTSAGS 86 (220)
T ss_dssp EEEETTE-EEEEEEECCCT---TSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTS---TTCCSC
T ss_pred EEeCCCC-eEEEEEEeCCC---CCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCC---CCCCCC
Confidence 3445567 89999999973 3 56899999999652 22233456677889999999999999984 333211
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcch
Q 003886 642 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC 721 (789)
Q Consensus 642 ~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~ 721 (789)
........+|+.++++++.++ .+.++++++|||+||.+++.++.++ +++++|+.+|......
T Consensus 87 ---~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~----------- 148 (220)
T 2fuk_A 87 ---FDHGDGEQDDLRAVAEWVRAQ--RPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD----------- 148 (220)
T ss_dssp ---CCTTTHHHHHHHHHHHHHHHH--CTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-----------
T ss_pred ---cccCchhHHHHHHHHHHHHhc--CCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-----------
Confidence 122344589999999999988 3678999999999999999999986 8999999998764211
Q ss_pred hhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 722 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
...+. ..+|+|++||++|..+|++++.++++.++
T Consensus 149 ------------------------------~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 182 (220)
T 2fuk_A 149 ------------------------------FSDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLE 182 (220)
T ss_dssp ------------------------------CTTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCS
T ss_pred ------------------------------hhhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhC
Confidence 00111 25799999999999999999999999884
No 54
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.73 E-value=5.1e-18 Score=178.73 Aligned_cols=182 Identities=15% Similarity=0.148 Sum_probs=132.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHH
Q 003886 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 654 (789)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D 654 (789)
+...++.|.+ ..++.|+||++|||++.. ....|....+.|+++||.|+++||||+++... ...++|
T Consensus 68 ~~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~-----------~~~~~d 134 (303)
T 4e15_A 68 QLVDVFYSEK--TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTL-----------EQLMTQ 134 (303)
T ss_dssp CEEEEEECTT--CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCH-----------HHHHHH
T ss_pred cEEEEEecCC--CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCCh-----------hHHHHH
Confidence 4555777863 456789999999987543 23345556788999999999999998654321 224789
Q ss_pred HHHHHHHHHHc-CCCCCccEEEEEcCccHHHHHHHHHhCC-------CceeEEEEeCCccchhhhhcCCCCCcchhhhhc
Q 003886 655 VLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAP-------DKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 726 (789)
Q Consensus 655 ~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~~~~~p-------~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~ 726 (789)
+.++++++.+. ..++.++|+|+|||+||++++.++.+.. ++++++|+.+|+.++..+...... ....
T Consensus 135 ~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~~---~~~~-- 209 (303)
T 4e15_A 135 FTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESV---NPKN-- 209 (303)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTTT---SGGG--
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhccccc---chhh--
Confidence 99999999873 2356899999999999999999988643 279999999999987655431100 0001
Q ss_pred cCccccccCCCCChhhHHHHHhcCcc-ccCCCC----CCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 727 GSKGKDSFTESPSVEDLTRFHSKSPI-SHISKV----KTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~~~i----~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
..... .+.+...+|+ ..+.++ ++|+||+||++|..||+.++.+++++|+
T Consensus 210 -------~~~~~----~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~ 263 (303)
T 4e15_A 210 -------ILGLN----ERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLR 263 (303)
T ss_dssp -------TTCCC----TTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred -------hhcCC----HHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHH
Confidence 11111 1223456777 566666 8999999999999999999999999885
No 55
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.73 E-value=1.5e-17 Score=173.11 Aligned_cols=186 Identities=20% Similarity=0.232 Sum_probs=119.7
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
..+.||++||.+++ ...|....+.|+++||.|+++|+|| +|.+........+ ...++|+.++++++.+. .
T Consensus 50 ~~~~VlllHG~~~s--~~~~~~la~~La~~Gy~Via~Dl~G---hG~S~~~~~~~~~-~~~~~d~~~~~~~l~~~----~ 119 (281)
T 4fbl_A 50 SRIGVLVSHGFTGS--PQSMRFLAEGFARAGYTVATPRLTG---HGTTPAEMAASTA-SDWTADIVAAMRWLEER----C 119 (281)
T ss_dssp SSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTT---SSSCHHHHHTCCH-HHHHHHHHHHHHHHHHH----C
T ss_pred CCceEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEECCCC---CCCCCccccCCCH-HHHHHHHHHHHHHHHhC----C
Confidence 44668999996654 5678888899999999999999998 5655332111111 11257888888888765 3
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhh-----hcCCCCCcch--hhhhccCccccccC--CCCChh
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-----VGTTDIPDWC--YVESYGSKGKDSFT--ESPSVE 741 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~ 741 (789)
++++|+|||+||.+++.++.++|++++++|+.+|...+... .......... ............+. ..+ ..
T Consensus 120 ~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 198 (281)
T 4fbl_A 120 DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTP-VP 198 (281)
T ss_dssp SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEE-GG
T ss_pred CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCc-hH
Confidence 68999999999999999999999999999999987543211 0000000000 00000000000000 000 01
Q ss_pred hHHHHHhc--CccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 742 DLTRFHSK--SPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 742 ~~~~~~~~--sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
....+... .....+.+|++|+|++||++|.+||++++..+++.++.
T Consensus 199 ~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~ 246 (281)
T 4fbl_A 199 AIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGS 246 (281)
T ss_dssp GHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCC
T ss_pred HHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCC
Confidence 11111110 11134678999999999999999999999999999864
No 56
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=5.1e-16 Score=183.58 Aligned_cols=263 Identities=11% Similarity=0.080 Sum_probs=173.6
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
.+..++|||| ++++|..+. .++..+ .+++..+++.....+ ..++|||||++|||+.
T Consensus 83 ~v~~~~~spd-~~~~~~~~~-----~i~~~d~~~~~~~~l~~~~~~~----------~~~~~SpdG~~la~~~------- 139 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFTQG-----GLVGFDMLARKVTYLFDTNEET----------ASLDFSPVGDRVAYVR------- 139 (706)
T ss_dssp CCEEEEETTT-TEEEEEETT-----EEEEEETTTTEEEEEECCTTCC----------TTCEECTTSSEEEEEE-------
T ss_pred CceeEEECCC-CeEEEEECC-----EEEEEECCCCceEEccCCcccc----------cCCcCCCCCCEEEEEE-------
Confidence 4788999999 888888653 466555 456655555433333 7899999999999962
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccC-----CceEeccCCCCCCc------------
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS-----GEVQAVKGIPKSLS------------ 296 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~-----g~~~~l~~~~~~~~------------ 296 (789)
+..|++||+.+ ++.++++ .....
T Consensus 140 --------------------------------------~~~i~v~~~~~~~~~~g~~~~~~--~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 140 --------------------------------------NHNLYIARGGKLGEGMSRAIAVT--IDGTETLVYGQAVHQRE 179 (706)
T ss_dssp --------------------------------------TTEEEEEECBCTTSCCCCCEESC--SCCBTTEEESSCCGGGC
T ss_pred --------------------------------------CCeEEEEecCcccccCCCcEEec--cCCCCCeEcccchhhhh
Confidence 25799999999 8888773 32222
Q ss_pred ---cceEEEeeCCCCCccEEEEEeecCCcee--------------eeeee----eccCCcceEEEecccccchhhhhhhh
Q 003886 297 ---VGQVVWAPLNEGLHQYLVFVGWSSETRK--------------LGIKY----CYNRPCALYAVRVSLYKSEASELELK 355 (789)
Q Consensus 297 ---~~~~~wSPDg~~~~~~l~f~~~~~~~~~--------------~g~~~----~~~~~~~l~~~d~~~~~~~~~~~~~~ 355 (789)
+..+.|||||+. |+|.+....... ....| ..+....|+++|+
T Consensus 180 ~~~~~~~~~SpDg~~----la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~------------- 242 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSC----LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL------------- 242 (706)
T ss_dssp TTCCCSEEECTTSSE----EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET-------------
T ss_pred cCCCceEEECCCCCE----EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC-------------
Confidence 478999999999 999874321000 00000 0113357999998
Q ss_pred cCCCCCCCeeecCCC---CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCC-CCCcccceeeEEeeee
Q 003886 356 ESSSEDLPVVNLTES---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG-NFSSLEKIVDVIPVVQ 431 (789)
Q Consensus 356 ~~~~~~~~~~~Lt~~---~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~-~~~~t~~~~~v~~~~~ 431 (789)
++++.+.++.. ...+..++|||||++|++.+.... .....|+++|+.++. .+.+....
T Consensus 243 ----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~v~~~d~~~g~~~~~~~~~~-------- 304 (706)
T 2z3z_A 243 ----ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRA------QNECKVNAYDAETGRFVRTLFVET-------- 304 (706)
T ss_dssp ----TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTT------SCEEEEEEEETTTCCEEEEEEEEE--------
T ss_pred ----CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCC------CCeeEEEEEECCCCceeeEEEEcc--------
Confidence 66766666532 345678999999999999775431 134579999998762 22111000
Q ss_pred ccCCCCCccccccCCCCCcccc--CCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCcee-EEeeecCCEEEEEEeC
Q 003886 432 CAEGDCFPGLYSSSILSNPWLS--DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSW-SLLTLDGDNIIAVSSS 508 (789)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~--Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~-~~~s~dg~~l~~~~ss 508 (789)
... |...+..+.|+| ||+ +++.+..++...||.++..++.++.++........ ..+++||+.|++..+.
T Consensus 305 ---~~~----~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 305 ---DKH----YVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp ---CSS----CCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred ---CCC----eECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 000 111124678999 998 55666667888999999878888888776544433 5799999999888765
Q ss_pred CCC-CCeEEEEeeccc
Q 003886 509 PVD-VPQVKYGYFVDK 523 (789)
Q Consensus 509 ~~~-p~~i~~~~~~~~ 523 (789)
... -..||..++.++
T Consensus 377 ~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGG 392 (706)
T ss_dssp SCTTCBEEEEEETTCC
T ss_pred CCCceEEEEEEEcCCC
Confidence 331 246888776543
No 57
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.73 E-value=4.7e-17 Score=191.03 Aligned_cols=208 Identities=12% Similarity=0.092 Sum_probs=144.2
Q ss_pred ecCCCee--EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc---------------------------------------
Q 003886 569 TKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL--------------------------------------- 607 (789)
Q Consensus 569 ~~~~g~~--l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~--------------------------------------- 607 (789)
+..||.+ |.+.++.|++ .+++|+||..||...+...
T Consensus 179 ~~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 255 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKEL 255 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccc
Confidence 5679999 9999999984 4689999988774332100
Q ss_pred -------hhh-----HHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHc----------
Q 003886 608 -------SSY-----SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM---------- 665 (789)
Q Consensus 608 -------~~~-----~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~---------- 665 (789)
..| ....++|+++||+|+++|+||.++.+.. ...++..+.+|+.++++|+..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~-----~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 256 PIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGF-----QTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSC-----CCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCc-----CCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 011 1234789999999999999996554322 2234445789999999999843
Q ss_pred -----CCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCC-------CCCcchhh----hhccCc
Q 003886 666 -----GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------DIPDWCYV----ESYGSK 729 (789)
Q Consensus 666 -----~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~-------~~~~~~~~----~~~~~~ 729 (789)
+ .+..||+++|+||||++++.+|+++|+.++++|+.+|+.++..++... ..+.+... ..+...
T Consensus 331 ~~v~q~-~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~ 409 (763)
T 1lns_A 331 HEIKAS-WANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRN 409 (763)
T ss_dssp CEECCT-TEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGG
T ss_pred cccccc-CCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhh
Confidence 3 345799999999999999999999999999999999998765543221 11111000 000000
Q ss_pred c---------------cccc-----CCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 730 G---------------KDSF-----TESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 730 ~---------------~~~~-----~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
. .+.+ ...+. ....+...++..++++|++|+|++||.+|.+||+.++.+++++|++
T Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~ 485 (763)
T 1lns_A 410 LDGADFLKGNAEYEKRLAEMTAALDRKSGD--YNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE 485 (763)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHCTTTCC--CCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT
T ss_pred cCcchhhhHHHHHHHHHHHHHhhhhhccCc--hhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc
Confidence 0 0000 00010 1123445677888999999999999999999999999999999975
No 58
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.73 E-value=3.7e-18 Score=178.26 Aligned_cols=192 Identities=16% Similarity=0.177 Sum_probs=134.1
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..+.++++.|. +.|+||++||++++ ...|......|+++||.|+++|+|| +|.+..... .......
T Consensus 14 ~g~~l~~~~~~p~------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~g~s~~~~~-~~~~~~~ 81 (290)
T 3ksr_A 14 GQDELSGTLLTPT------GMPGVLFVHGWGGS--QHHSLVRAREAVGLGCICMTFDLRG---HEGYASMRQ-SVTRAQN 81 (290)
T ss_dssp TTEEEEEEEEEEE------SEEEEEEECCTTCC--TTTTHHHHHHHHTTTCEEECCCCTT---SGGGGGGTT-TCBHHHH
T ss_pred CCeEEEEEEecCC------CCcEEEEeCCCCCC--cCcHHHHHHHHHHCCCEEEEeecCC---CCCCCCCcc-cccHHHH
Confidence 6789999999985 78999999998764 4567777889999999999999998 444432211 1111233
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 731 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (789)
.+|+.++++++.+++.+|.++|+|+|||+||++++.++.++| ++++++.+|.......+ ..+...+.. ....
T Consensus 82 ~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~---~~~~~~~~~---~~~~ 153 (290)
T 3ksr_A 82 LDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHW---DQPKVSLNA---DPDL 153 (290)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCT---TSBHHHHHH---STTH
T ss_pred HHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhh---hcccccccC---Chhh
Confidence 689999999999887788899999999999999999999887 78888888876432110 001100000 0000
Q ss_pred cccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCCC
Q 003886 732 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPFS 788 (789)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~~ 788 (789)
..+..... .+...++...+.++++|+|++||++|..||++++..+++.+++.
T Consensus 154 ~~~~~~~~-----~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~ 205 (290)
T 3ksr_A 154 MDYRRRAL-----APGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNA 205 (290)
T ss_dssp HHHTTSCC-----CGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTS
T ss_pred hhhhhhhh-----hhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccC
Confidence 00110000 00112223345678899999999999999999999999998753
No 59
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.73 E-value=3.1e-17 Score=163.56 Aligned_cols=163 Identities=20% Similarity=0.234 Sum_probs=124.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCC--CCCC-
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--GKVG- 648 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~--~~~~- 648 (789)
+|.++.++++.|.+ +.|+||++||++.......+....+.|+++||.|+++|+|| +|.+...... ....
T Consensus 20 ~g~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~~~~ 91 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLT---QEEEEIDLRTRHLRFDI 91 (223)
T ss_dssp TTEEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSC---HHHHHHHHHHCSSTTCH
T ss_pred CCeEEEEEEecCCC-----CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCC---cCCCCccchhhcccCcH
Confidence 78899999999862 68999999998765443345567788999999999999997 4443322111 0011
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccC
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 728 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~ 728 (789)
....+|+.++++++..++.+|.++++++|||+||.+++.++.++|++++++|+.+|..++.
T Consensus 92 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------- 152 (223)
T 2o2g_A 92 GLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------------------- 152 (223)
T ss_dssp HHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-------------------
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-------------------
Confidence 2225788999999998887899999999999999999999999999999999999865320
Q ss_pred ccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 729 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
...+.++++|+|+++|++|..+|... .+.++.+
T Consensus 153 -----------------------~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~ 185 (223)
T 2o2g_A 153 -----------------------PSALPHVKAPTLLIVGGYDLPVIAMN-EDALEQL 185 (223)
T ss_dssp -----------------------TTTGGGCCSCEEEEEETTCHHHHHHH-HHHHHHC
T ss_pred -----------------------HHHHhcCCCCEEEEEccccCCCCHHH-HHHHHhh
Confidence 02345678999999999999998554 4444444
No 60
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.72 E-value=4.6e-17 Score=179.84 Aligned_cols=191 Identities=13% Similarity=0.099 Sum_probs=129.0
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHH
Q 003886 575 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 654 (789)
Q Consensus 575 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D 654 (789)
.+.+.++.|+ ..++.|+||++||+++.. +......|+++||.|+++|+||.++.. ........+|
T Consensus 144 ~l~~~l~~P~---~~~~~P~Vv~~hG~~~~~----~~~~a~~La~~Gy~V~a~D~rG~g~~~--------~~~~~~~~~d 208 (422)
T 3k2i_A 144 RVRATLFLPP---GPGPFPGIIDIFGIGGGL----LEYRASLLAGHGFATLALAYYNFEDLP--------NNMDNISLEY 208 (422)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCTTCSC----CCHHHHHHHTTTCEEEEEECSSSTTSC--------SSCSCEETHH
T ss_pred cEEEEEEcCC---CCCCcCEEEEEcCCCcch----hHHHHHHHHhCCCEEEEEccCCCCCCC--------CCcccCCHHH
Confidence 5899999997 356789999999976642 233477899999999999999954432 2233456899
Q ss_pred HHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhh---cCCCCCcchhh-h--hccC
Q 003886 655 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---GTTDIPDWCYV-E--SYGS 728 (789)
Q Consensus 655 ~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~---~~~~~~~~~~~-~--~~~~ 728 (789)
+.++++++.++..+|.++|+|+|||+||++++.++.++|+ ++++|+.+|........ .....+...+. . ....
T Consensus 209 ~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
T 3k2i_A 209 FEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAF 287 (422)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEECT
T ss_pred HHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccCc
Confidence 9999999999888899999999999999999999999997 99999998876321100 00000000000 0 0000
Q ss_pred cccc---ccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHH-HHHHHHCC
Q 003886 729 KGKD---SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQVIYHIP 786 (789)
Q Consensus 729 ~~~~---~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~-~~l~~~l~ 786 (789)
.... .....+. .....+....+.++++|+|++||++|.++|.++. ..+++.|+
T Consensus 288 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~ 344 (422)
T 3k2i_A 288 SGLVDIVDIRNALV-----GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQ 344 (422)
T ss_dssp TSCEECTTCBCCCT-----TGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHhhhh-----hcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 0000 0000110 0112233345678899999999999999999866 56776654
No 61
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.72 E-value=3.2e-17 Score=180.13 Aligned_cols=199 Identities=17% Similarity=0.217 Sum_probs=131.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHH-HHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~-~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
+|..+.++++.+ ..++.|+||++||++.+ ...|.... ..+.++||.|+++|+|| +|.+..... .....
T Consensus 143 ~~~~l~~~~~~~----~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~g~~vi~~D~~G---~G~s~~~~~--~~~~~ 211 (405)
T 3fnb_A 143 EGELLPGYAIIS----EDKAQDTLIVVGGGDTS--REDLFYMLGYSGWEHDYNVLMVDLPG---QGKNPNQGL--HFEVD 211 (405)
T ss_dssp TTEEEEEEEECC----SSSCCCEEEEECCSSCC--HHHHHHHTHHHHHHTTCEEEEECCTT---STTGGGGTC--CCCSC
T ss_pred CCeEEEEEEEcC----CCCCCCEEEEECCCCCC--HHHHHHHHHHHHHhCCcEEEEEcCCC---CcCCCCCCC--CCCcc
Confidence 578899988853 34556999999996553 44444333 36678999999999998 454432222 22234
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcC-----CCCCcchhhhh
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDWCYVES 725 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~-----~~~~~~~~~~~ 725 (789)
..+|+.++++++..++ ++|+|+|||+||++++.++.++| +++++|+.+|+.++...... ...+.+.....
T Consensus 212 ~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~ 286 (405)
T 3fnb_A 212 ARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWG 286 (405)
T ss_dssp THHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhhhhCcHHHHHHH
Confidence 4788999999986653 78999999999999999999988 89999999999987544311 00111000000
Q ss_pred ccC-------------ccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 726 YGS-------------KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 726 ~~~-------------~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
... .....+...........+...++...+.++++|+|++||++|..||++++.++++.++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~ 360 (405)
T 3fnb_A 287 SKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFK 360 (405)
T ss_dssp -----CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred HHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhc
Confidence 000 0000001111112223344455555578899999999999999999999999999885
No 62
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.72 E-value=6.5e-17 Score=177.62 Aligned_cols=199 Identities=14% Similarity=0.125 Sum_probs=132.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..+.++++.|. ..++.|+||++||.++.. ...+......|+++||.|+++|+|| +|.+........ .
T Consensus 176 ~g~~l~~~~~~P~---~~~~~P~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~V~~~D~~G---~G~s~~~~~~~~----~ 244 (415)
T 3mve_A 176 EKGKITAHLHLTN---TDKPHPVVIVSAGLDSLQ-TDMWRLFRDHLAKHDIAMLTVDMPS---VGYSSKYPLTED----Y 244 (415)
T ss_dssp SSSEEEEEEEESC---SSSCEEEEEEECCTTSCG-GGGHHHHHHTTGGGTCEEEEECCTT---SGGGTTSCCCSC----T
T ss_pred CCEEEEEEEEecC---CCCCCCEEEEECCCCccH-HHHHHHHHHHHHhCCCEEEEECCCC---CCCCCCCCCCCC----H
Confidence 6788999999997 356789999999976531 2334445677889999999999998 444432111111 1
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhh--hcCCCCCcchhhhhccCc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM--VGTTDIPDWCYVESYGSK 729 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~--~~~~~~~~~~~~~~~~~~ 729 (789)
.....++++++...+.+|.++|+|+|||+||++++.++..+|++++++|+.+|+.+.... ......+. .+...+..
T Consensus 245 ~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 322 (415)
T 3mve_A 245 SRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPK-MYLDVLAS- 322 (415)
T ss_dssp THHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTSCH-HHHHHHHH-
T ss_pred HHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHhHH-HHHHHHHH-
Confidence 233456788887777788999999999999999999999889999999999998642111 00001111 01111100
Q ss_pred cccccCCCC--Chh-hHHHHHhcCcccc----CCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 730 GKDSFTESP--SVE-DLTRFHSKSPISH----ISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 730 ~~~~~~~~~--~~~-~~~~~~~~sp~~~----~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
..+.. ... ....+..+++... +.++++|+|++||++|.+||++++..+++..++
T Consensus 323 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~ 383 (415)
T 3mve_A 323 ----RLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTY 383 (415)
T ss_dssp ----HTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTBTT
T ss_pred ----HhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC
Confidence 01111 111 1122233333322 468899999999999999999999999886654
No 63
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.71 E-value=6.3e-17 Score=182.58 Aligned_cols=208 Identities=12% Similarity=0.096 Sum_probs=147.0
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch--h------------------h-HHHHHHHHHCCcEEE
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS--S------------------Y-SKSLAFLSSVGYSLL 625 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~--~------------------~-~~~~~~la~~Gy~V~ 625 (789)
.++..||.+|.+.++.|++ .+++|+||+.||.+...... . | ....+.|+++||+|+
T Consensus 45 ~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv 121 (560)
T 3iii_A 45 TVEMRDGEKLYINIFRPNK---DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVV 121 (560)
T ss_dssp EEECTTSCEEEEEEEECSS---SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEE
T ss_pred EEECCCCcEEEEEEEecCC---CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEE
Confidence 5677899999999999973 57899999999855532100 0 0 012578999999999
Q ss_pred EEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 626 IVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 626 ~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
.+|+||+++.+..+. .++..+.+|+.++++|+.+++++| .||+++|+|+||++++.+|+..|+.++|+|+.+|+
T Consensus 122 ~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~ 195 (560)
T 3iii_A 122 KVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGL 195 (560)
T ss_dssp EEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCC
T ss_pred EEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCc
Confidence 999999777665442 344567899999999999988777 89999999999999999999989999999999999
Q ss_pred cchhh-hhcCCCCCcchhhh--------hccC-cccc----ccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCC
Q 003886 706 CNLAL-MVGTTDIPDWCYVE--------SYGS-KGKD----SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL 771 (789)
Q Consensus 706 ~~~~~-~~~~~~~~~~~~~~--------~~~~-~~~~----~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~ 771 (789)
.|+.. ...........+.. .... ...+ .+...+..+ +.+...++ .+++|++|+|+++|-.|.
T Consensus 196 ~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d--~~W~~~~~--~~~~I~vPvl~v~Gw~D~ 271 (560)
T 3iii_A 196 NDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFD--DFWKQRQV--PLSQIKTPLLTCASWSTQ 271 (560)
T ss_dssp CBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSC--HHHHTTBC--CGGGCCSCEEEEEEGGGT
T ss_pred ccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcc--hHhhccCC--chhhCCCCEEEeCCcCCC
Confidence 99753 11111111110000 0000 0000 011111111 23444444 678999999999999998
Q ss_pred CCChHHHHHHHHHCCC
Q 003886 772 RVPVSNGLQVIYHIPF 787 (789)
Q Consensus 772 ~vp~~~~~~l~~~l~~ 787 (789)
.+...++.+.|++|+.
T Consensus 272 ~~~~~g~l~~y~~l~~ 287 (560)
T 3iii_A 272 GLHNRGSFEGFKQAAS 287 (560)
T ss_dssp TTTHHHHHHHHHHCCC
T ss_pred cccchhHHHHHHhccc
Confidence 7888888999998864
No 64
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.71 E-value=4.2e-16 Score=153.41 Aligned_cols=162 Identities=19% Similarity=0.229 Sum_probs=127.1
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH--HHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~--~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
.+|.+++++++.|.+ +.|+||++||++.+ ...|.. ....|+++||.|+++|+|| +|.+..... ...
T Consensus 11 ~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~--~~~ 78 (207)
T 3bdi_A 11 VNGTRVFQRKMVTDS-----NRRSIALFHGYSFT--SMDWDKADLFNNYSKIGYNVYAPDYPG---FGRSASSEK--YGI 78 (207)
T ss_dssp ETTEEEEEEEECCTT-----CCEEEEEECCTTCC--GGGGGGGTHHHHHHTTTEEEEEECCTT---STTSCCCTT--TCC
T ss_pred eCCcEEEEEEEeccC-----CCCeEEEECCCCCC--ccccchHHHHHHHHhCCCeEEEEcCCc---ccccCcccC--CCC
Confidence 478899999998863 67899999997764 456777 7889999999999999998 444421000 112
Q ss_pred cc-cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhcc
Q 003886 649 SQ-DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (789)
Q Consensus 649 ~~-~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~ 727 (789)
.. +.+++.+.+..++++ ++.++++++|||+||.+++.++.++|++++++|+.+|..... +
T Consensus 79 ~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------~----- 139 (207)
T 3bdi_A 79 DRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES------------L----- 139 (207)
T ss_dssp TTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG------------G-----
T ss_pred CcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc------------h-----
Confidence 23 578888888888876 456799999999999999999999999999999998863110 0
Q ss_pred CccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 728 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
...+.++++|+|+++|++|..+|++.+.++++.+++
T Consensus 140 ------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~ 175 (207)
T 3bdi_A 140 ------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIISG 175 (207)
T ss_dssp ------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHSTT
T ss_pred ------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcCC
Confidence 123456789999999999999999999999998854
No 65
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.70 E-value=8.6e-17 Score=178.69 Aligned_cols=194 Identities=12% Similarity=0.113 Sum_probs=127.6
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHH
Q 003886 575 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 654 (789)
Q Consensus 575 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D 654 (789)
.+.++++.|+ ..++.|+||++||+++.. +......|+++||.|+++|+||.++... ......++|
T Consensus 160 ~l~~~l~~P~---~~~~~P~Vv~lhG~~~~~----~~~~a~~La~~Gy~Vla~D~rG~~~~~~--------~~~~~~~~d 224 (446)
T 3hlk_A 160 RVRGTLFLPP---EPGPFPGIVDMFGTGGGL----LEYRASLLAGKGFAVMALAYYNYEDLPK--------TMETLHLEY 224 (446)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCSSCSC----CCHHHHHHHTTTCEEEEECCSSSTTSCS--------CCSEEEHHH
T ss_pred eEEEEEEeCC---CCCCCCEEEEECCCCcch----hhHHHHHHHhCCCEEEEeccCCCCCCCc--------chhhCCHHH
Confidence 5899999997 346789999999987642 2234778999999999999999544322 223356899
Q ss_pred HHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhh---cCCCCCcchh---hhhccC
Q 003886 655 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---GTTDIPDWCY---VESYGS 728 (789)
Q Consensus 655 ~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~---~~~~~~~~~~---~~~~~~ 728 (789)
+.++++++.++..+|.++|+|+|||+||++++.++.++|+ ++++|+.+|........ .....+...+ ......
T Consensus 225 ~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
T 3hlk_A 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTK 303 (446)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEECS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcccccc
Confidence 9999999999988899999999999999999999999987 99999998865321100 0000000000 000000
Q ss_pred ccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHH-HHHHHHCC
Q 003886 729 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQVIYHIP 786 (789)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~-~~l~~~l~ 786 (789)
.....+... ...............+.++++|+|++||++|.++|..+. ..+++.|+
T Consensus 304 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~ 360 (446)
T 3hlk_A 304 DGYADIVDV--LNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ 360 (446)
T ss_dssp SSCEECTTC--BCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHH
T ss_pred chHHHHHHH--HhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHH
Confidence 000000000 000000011122234678899999999999999999554 57776654
No 66
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.70 E-value=1.6e-17 Score=172.66 Aligned_cols=194 Identities=14% Similarity=0.138 Sum_probs=122.5
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHH---HHHHHHCCcEEEEEcC--CCCCCCCch------
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNY--RGSLGFGEE------ 638 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~---~~~la~~Gy~V~~~d~--rGs~G~G~~------ 638 (789)
...|..+...++.|++++ .+++|+||++||+++. ...|... .+.++++||.|+++|+ ||.++.|..
T Consensus 24 ~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~--~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g 100 (282)
T 3fcx_A 24 VELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCT--EQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFG 100 (282)
T ss_dssp TTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCC--SHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CC
T ss_pred hhcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCC--ccchhhcchHHHHhhcCCeEEEEeccccCcccccccccccccc
Confidence 446788999999998543 3689999999998775 3344433 5678899999999999 876654432
Q ss_pred ----hhccCCC-CCC--cccHHHHH-HHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhh
Q 003886 639 ----ALQSLPG-KVG--SQDVNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (789)
Q Consensus 639 ----~~~~~~~-~~~--~~~~~D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~ 710 (789)
+...... .+. .....++. ++++++.++..+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~ 180 (282)
T 3fcx_A 101 TGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180 (282)
T ss_dssp CCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGG
T ss_pred CCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCccc
Confidence 1111110 000 01123333 444555445447889999999999999999999999999999999999887432
Q ss_pred hhcCCCCCcch---hhhhccCccccccCCCCChhhHHHHHhcCcccc---CCCCCCCEEEEEeCCCCCCChHH--HHHHH
Q 003886 711 MVGTTDIPDWC---YVESYGSKGKDSFTESPSVEDLTRFHSKSPISH---ISKVKTPTIFLLGAQDLRVPVSN--GLQVI 782 (789)
Q Consensus 711 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~---~~~i~~P~Lii~G~~D~~vp~~~--~~~l~ 782 (789)
. .|. +...++. ....+...+|... +.++++|+|++||++|.+||..+ +.+++
T Consensus 181 ~-------~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 240 (282)
T 3fcx_A 181 C-------PWGKKAFSGYLGT-------------DQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240 (282)
T ss_dssp S-------HHHHHHHHHHHC----------------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHH
T ss_pred C-------chhHHHHHHhcCC-------------chhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHH
Confidence 1 111 0011111 0011223344333 44558999999999999997655 44666
Q ss_pred HHCC
Q 003886 783 YHIP 786 (789)
Q Consensus 783 ~~l~ 786 (789)
++|+
T Consensus 241 ~~l~ 244 (282)
T 3fcx_A 241 AACT 244 (282)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 67
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.69 E-value=6.2e-16 Score=158.92 Aligned_cols=199 Identities=14% Similarity=0.202 Sum_probs=129.2
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhH-HHHHHHHHCCcEEEEEcCCCCCCCCchhhccCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~-~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
.+...||..+++.++.|. ..++.|+||++||++... ....|. .....|++. |.|+++|+||++...
T Consensus 7 ~~~~~dg~~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~-------- 74 (275)
T 3h04_A 7 KVITKDAFALPYTIIKAK---NQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS-------- 74 (275)
T ss_dssp EEECTTSCEEEEEEECCS---SSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC--------
T ss_pred EEecCCcEEEEEEEEccC---CCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc--------
Confidence 456678999999999986 445789999999987322 222333 455667666 999999999853221
Q ss_pred CCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcc----
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW---- 720 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~---- 720 (789)
.....+|+.++++++.++ ++.++++|+|||+||++++.++.+ ++++++|+.+|..++............
T Consensus 75 ---~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 147 (275)
T 3h04_A 75 ---LDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIA 147 (275)
T ss_dssp ---HHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHH
T ss_pred ---cchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhccc
Confidence 123478999999999988 678899999999999999999998 789999999998865211100000000
Q ss_pred -----hhhhhccCccccccCCCCChhhHHH-------------HHh-------cC-ccccCCCCCCCEEEEEeCCCCCCC
Q 003886 721 -----CYVESYGSKGKDSFTESPSVEDLTR-------------FHS-------KS-PISHISKVKTPTIFLLGAQDLRVP 774 (789)
Q Consensus 721 -----~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-------~s-p~~~~~~i~~P~Lii~G~~D~~vp 774 (789)
.....+.. ............... +.. .. ....+.+++ |+|++||++|..||
T Consensus 148 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~ 224 (275)
T 3h04_A 148 QSINETMIAQLTS--PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVP 224 (275)
T ss_dssp TTSCHHHHHTTSC--SSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSC
T ss_pred ccchHHHHhcccC--CCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCC
Confidence 00000000 000000000000000 000 00 011136677 99999999999999
Q ss_pred hHHHHHHHHHCCC
Q 003886 775 VSNGLQVIYHIPF 787 (789)
Q Consensus 775 ~~~~~~l~~~l~~ 787 (789)
++++.++++.+++
T Consensus 225 ~~~~~~~~~~~~~ 237 (275)
T 3h04_A 225 VEESEHIMNHVPH 237 (275)
T ss_dssp THHHHHHHTTCSS
T ss_pred hHHHHHHHHhcCC
Confidence 9999999998865
No 68
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.69 E-value=3.9e-17 Score=178.61 Aligned_cols=141 Identities=11% Similarity=0.005 Sum_probs=105.2
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc------------hhhH----HHHHHHHHCCcEEEEEcCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL------------SSYS----KSLAFLSSVGYSLLIVNYR 630 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~------------~~~~----~~~~~la~~Gy~V~~~d~r 630 (789)
.+...+|..+.++++.|++. .++.|+||++||++++... ..|. ...+.|+++||+|+++|+|
T Consensus 96 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~r 173 (398)
T 3nuz_A 96 EFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNP 173 (398)
T ss_dssp EECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCT
T ss_pred EEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCC
Confidence 56677899999999999742 5689999999997663210 0111 4678999999999999999
Q ss_pred CCCCCCchhhcc----------------CCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCC
Q 003886 631 GSLGFGEEALQS----------------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 694 (789)
Q Consensus 631 Gs~G~G~~~~~~----------------~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~ 694 (789)
|.++.+...... ....++...+.|+.++++++.+++.+|.+||+|+|||+||++++.+++.. +
T Consensus 174 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~ 252 (398)
T 3nuz_A 174 AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-T 252 (398)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-T
T ss_pred CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-C
Confidence 855443222100 11122233457999999999999889999999999999999999988864 5
Q ss_pred ceeEEEEeCCccchhh
Q 003886 695 KFVAAAARNPLCNLAL 710 (789)
Q Consensus 695 ~~~a~v~~~pv~~~~~ 710 (789)
+++++|+.++++.+..
T Consensus 253 ~i~a~v~~~~~~~~~~ 268 (398)
T 3nuz_A 253 SIYAFVYNDFLCQTQE 268 (398)
T ss_dssp TCCEEEEESCBCCHHH
T ss_pred cEEEEEEecccccchh
Confidence 8999999877766543
No 69
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.69 E-value=7.3e-17 Score=176.12 Aligned_cols=207 Identities=11% Similarity=0.027 Sum_probs=129.8
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc------------hhhH----HHHHHHHHCCcEEEEEcCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL------------SSYS----KSLAFLSSVGYSLLIVNYR 630 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~------------~~~~----~~~~~la~~Gy~V~~~d~r 630 (789)
.+...+|..+.++++.|++. .++.|+||++||.++.... ..|. ...+.|+++||+|+++|+|
T Consensus 91 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~r 168 (391)
T 3g8y_A 91 EFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNA 168 (391)
T ss_dssp EECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCT
T ss_pred EEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCC
Confidence 56677899999999999742 5689999999997653210 0112 4678899999999999999
Q ss_pred CCCCCCchhhccC----------------CCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCC
Q 003886 631 GSLGFGEEALQSL----------------PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 694 (789)
Q Consensus 631 Gs~G~G~~~~~~~----------------~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~ 694 (789)
|.++.+....... ...++...+.|+.++++++.+++.+|.+||+|+|||+||++++.+++. ++
T Consensus 169 g~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~-~~ 247 (391)
T 3g8y_A 169 AAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL-DK 247 (391)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH-CT
T ss_pred CccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc-CC
Confidence 8554432211000 001111223789999999999988999999999999999999999886 46
Q ss_pred ceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCC-CCCEEEEEeCCCCCC
Q 003886 695 KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRV 773 (789)
Q Consensus 695 ~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~Lii~G~~D~~v 773 (789)
+++++|+.++++.+..........+..-...+.. ....+ .+.. ....+....+..+ ..|+||+||++|..|
T Consensus 248 ~i~a~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~--~p~~-----~~~~d~~~~~~~~ap~P~LiihG~~D~~v 319 (391)
T 3g8y_A 248 DIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPN-SIRHL--IPGY-----WRYFNFPDVVASLAPRPIIFTEGGLDRDF 319 (391)
T ss_dssp TCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSS-CGGGC--CTTG-----GGTCCHHHHHHTTTTSCEEECSCBCHHHH
T ss_pred ceeEEEEccCCCCcccchhhcccccccccccccc-cHHHh--CccH-----HhhCCHHHHHHhhcCCCEEEEcCCccHHH
Confidence 8999999998887643211000000000000000 00000 0000 0111111111112 369999999999988
Q ss_pred ChHHHHHHHHHCC
Q 003886 774 PVSNGLQVIYHIP 786 (789)
Q Consensus 774 p~~~~~~l~~~l~ 786 (789)
+...++++.+.
T Consensus 320 --~~~~~~~~~~g 330 (391)
T 3g8y_A 320 --RLVQSAYAASG 330 (391)
T ss_dssp --HHHHHHHHHTT
T ss_pred --HHHHHHHHHcC
Confidence 66777777654
No 70
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.68 E-value=3.1e-16 Score=161.23 Aligned_cols=151 Identities=17% Similarity=0.161 Sum_probs=120.3
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHH
Q 003886 577 EAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 656 (789)
Q Consensus 577 ~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~ 656 (789)
.+.++.|... ..++.|+||++||.+.. ...|......|+++||.|+++|+||.+ ... .....|+.
T Consensus 40 ~~~l~~p~~~-~~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g---~~~---------~~~~~d~~ 104 (262)
T 1jfr_A 40 GGTIYYPTST-ADGTFGAVVISPGFTAY--QSSIAWLGPRLASQGFVVFTIDTNTTL---DQP---------DSRGRQLL 104 (262)
T ss_dssp CEEEEEESCC-TTCCEEEEEEECCTTCC--GGGTTTHHHHHHTTTCEEEEECCSSTT---CCH---------HHHHHHHH
T ss_pred ceeEEecCCC-CCCCCCEEEEeCCcCCC--chhHHHHHHHHHhCCCEEEEeCCCCCC---CCC---------chhHHHHH
Confidence 3567777632 24678999999997664 456667788899999999999999843 221 12356888
Q ss_pred HHHHHHHH----cCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCcccc
Q 003886 657 TAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 732 (789)
Q Consensus 657 ~~i~~l~~----~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (789)
++++++.+ ...++.++++|+|||+||++++.++.++|+ ++++|+.+|...
T Consensus 105 ~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------------------- 158 (262)
T 1jfr_A 105 SALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------------------- 158 (262)
T ss_dssp HHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------
T ss_pred HHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-------------------------
Confidence 99999987 344678899999999999999999999987 899999877431
Q ss_pred ccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHH-HHHHHHHCCC
Q 003886 733 SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQVIYHIPF 787 (789)
Q Consensus 733 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~-~~~l~~~l~~ 787 (789)
...+.++++|+|++||++|..+|++. +.++++.+++
T Consensus 159 -------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~ 195 (262)
T 1jfr_A 159 -------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPG 195 (262)
T ss_dssp -------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCT
T ss_pred -------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhc
Confidence 12456778999999999999999998 9999999865
No 71
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.68 E-value=3.8e-15 Score=156.46 Aligned_cols=122 Identities=16% Similarity=0.338 Sum_probs=93.7
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..+...++.+.. ..++.|+||++||.+++ ...|......|+++||.|+++|+|| +|.+... ......
T Consensus 28 ~~~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~----~~~~~~ 96 (315)
T 4f0j_A 28 QGQPLSMAYLDVAP--KKANGRTILLMHGKNFC--AGTWERTIDVLADAGYRVIAVDQVG---FCKSSKP----AHYQYS 96 (315)
T ss_dssp TTEEEEEEEEEECC--SSCCSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC----SSCCCC
T ss_pred CCCCeeEEEeecCC--CCCCCCeEEEEcCCCCc--chHHHHHHHHHHHCCCeEEEeecCC---CCCCCCC----CccccC
Confidence 44445544444321 34567999999997764 5578888899999999999999998 4444321 112446
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++++.+.+..+++. ++.++++|+|||+||++++.++.++|++++++|+.+|..
T Consensus 97 ~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 149 (315)
T 4f0j_A 97 FQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149 (315)
T ss_dssp HHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcc
Confidence 78888888888877 566799999999999999999999999999999999864
No 72
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.68 E-value=2e-16 Score=170.82 Aligned_cols=129 Identities=20% Similarity=0.243 Sum_probs=98.2
Q ss_pred eeecCCCeeEEEEEEe-cCCC--------------------CCCCCCcEEEEEcCCCCCCCch---hhHHHHHHHHHC-C
Q 003886 567 NLTKGAQKPFEAIFVS-SSHK--------------------KDCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLSSV-G 621 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~-P~~~--------------------~~~~~~P~vv~~HGg~~~~~~~---~~~~~~~~la~~-G 621 (789)
.+...+| +.+.+|. |... ...++.|+||++|||++..... .|...+..|+++ |
T Consensus 68 ~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g 145 (365)
T 3ebl_A 68 IIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSK 145 (365)
T ss_dssp EEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHT
T ss_pred EecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCC
Confidence 4556677 5666776 7642 2346789999999988643322 356677788875 9
Q ss_pred cEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcC----CCCCc-cEEEEEcCccHHHHHHHHHhCCC--
Q 003886 622 YSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD-- 694 (789)
Q Consensus 622 y~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~~d~~-rv~l~G~S~GG~~a~~~~~~~p~-- 694 (789)
|+|+++|||+++++. ....++|+.++++|+.++. .+|++ ||+|+|+|+||++++.++.+.++
T Consensus 146 ~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~ 214 (365)
T 3ebl_A 146 GVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG 214 (365)
T ss_dssp SEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred CEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcC
Confidence 999999999865432 1234789999999999764 58998 99999999999999999987655
Q ss_pred -ceeEEEEeCCccch
Q 003886 695 -KFVAAAARNPLCNL 708 (789)
Q Consensus 695 -~~~a~v~~~pv~~~ 708 (789)
+++++|+.+|+++.
T Consensus 215 ~~~~g~vl~~p~~~~ 229 (365)
T 3ebl_A 215 VKVCGNILLNAMFGG 229 (365)
T ss_dssp CCCCEEEEESCCCCC
T ss_pred CceeeEEEEccccCC
Confidence 79999999998864
No 73
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.68 E-value=3.8e-16 Score=164.62 Aligned_cols=148 Identities=19% Similarity=0.207 Sum_probs=121.0
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHH
Q 003886 578 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLT 657 (789)
Q Consensus 578 ~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~ 657 (789)
+.++.|.. ..+.|+||++||+++. ...|......|+++||.|+++|+||. |.+. ....+|+.+
T Consensus 85 ~~~~~p~~---~~~~p~vv~~HG~~~~--~~~~~~~~~~la~~G~~vv~~d~~g~---g~s~---------~~~~~d~~~ 147 (306)
T 3vis_A 85 GTIYYPRE---NNTYGAIAISPGYTGT--QSSIAWLGERIASHGFVVIAIDTNTT---LDQP---------DSRARQLNA 147 (306)
T ss_dssp EEEEEESS---CSCEEEEEEECCTTCC--HHHHHHHHHHHHTTTEEEEEECCSST---TCCH---------HHHHHHHHH
T ss_pred eEEEeeCC---CCCCCEEEEeCCCcCC--HHHHHHHHHHHHhCCCEEEEecCCCC---CCCc---------chHHHHHHH
Confidence 56777763 3378999999997654 55777788899999999999999983 3322 123578899
Q ss_pred HHHHHHHc------CCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccc
Q 003886 658 AIDHVIDM------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 731 (789)
Q Consensus 658 ~i~~l~~~------~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (789)
+++++.+. ..+|.++|+|+|||+||++++.++.++|+ ++++|+.+|...
T Consensus 148 ~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------------ 202 (306)
T 3vis_A 148 ALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------------ 202 (306)
T ss_dssp HHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------------
T ss_pred HHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------------------
Confidence 99999887 66889999999999999999999999887 999999887432
Q ss_pred cccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChH-HHHHHHHHCCC
Q 003886 732 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVS-NGLQVIYHIPF 787 (789)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~-~~~~l~~~l~~ 787 (789)
...+.++++|+|++||++|..+|++ ++..+++.+++
T Consensus 203 --------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~ 239 (306)
T 3vis_A 203 --------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPS 239 (306)
T ss_dssp --------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCT
T ss_pred --------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhcc
Confidence 1235677899999999999999999 79999999876
No 74
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.68 E-value=8.1e-17 Score=167.26 Aligned_cols=197 Identities=12% Similarity=0.102 Sum_probs=126.3
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH---HHHHHHHCCcEEEEEcCCCCC-----------CC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSL-----------GF 635 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~Gy~V~~~d~rGs~-----------G~ 635 (789)
..+|..+...++.|++++..+++|+||++||+++.. ..|.. ....+++.||.|+++|.++.+ |.
T Consensus 25 ~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~ 102 (280)
T 3i6y_A 25 NTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSD--ENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQ 102 (280)
T ss_dssp TTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCS--SHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSST
T ss_pred cccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCCh--hHHhhcccHHHHHhhCCeEEEEeCCcccccccCccccccccc
Confidence 456889999999998766678899999999987653 34433 345677889999999987421 11
Q ss_pred CchhhccCCC-CC-Cccc-HHHHH-HHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhh
Q 003886 636 GEEALQSLPG-KV-GSQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 711 (789)
Q Consensus 636 G~~~~~~~~~-~~-~~~~-~~D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~ 711 (789)
|..+...... .+ .... ...+. +.++++.++..+ .+|++|+|||+||++++.++.++|++|+++|+.+|+.++...
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~ 181 (280)
T 3i6y_A 103 GAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNC 181 (280)
T ss_dssp TCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGS
T ss_pred CccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccC
Confidence 2221111110 00 0011 22232 445555454323 589999999999999999999999999999999998875321
Q ss_pred hcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCC--CCEEEEEeCCCCCCChHH-HHHHHHHCC
Q 003886 712 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSN-GLQVIYHIP 786 (789)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~vp~~~-~~~l~~~l~ 786 (789)
... ...+...++. ....+...+|...+.+++ +|+||+||++|.+||.+. +.+++++|+
T Consensus 182 ~~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~ 242 (280)
T 3i6y_A 182 PWG----QKAFTAYLGK-------------DTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAAS 242 (280)
T ss_dssp HHH----HHHHHHHHCS-------------CGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHH
T ss_pred chH----HHHHHHhcCC-------------chHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHH
Confidence 100 0000111111 011233445555555554 899999999999999855 777777765
No 75
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.68 E-value=1.5e-16 Score=169.01 Aligned_cols=186 Identities=18% Similarity=0.253 Sum_probs=124.1
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-chhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCCCcccH
Q 003886 575 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 652 (789)
Q Consensus 575 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~ 652 (789)
.+.++++.|. ..++.|+||++|||++... ...+...+..|+. .||.|+++|||+++++. ....+
T Consensus 66 ~i~~~~~~p~---~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----------~~~~~ 131 (322)
T 3fak_A 66 GCAAEWVRAP---GCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP-----------FPAAV 131 (322)
T ss_dssp TEEEEEEECT---TCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHHH
T ss_pred CeEEEEEeCC---CCCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-----------CCcHH
Confidence 3888899997 3467899999999886433 3355556667765 69999999999865432 23357
Q ss_pred HHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCc----eeEEEEeCCccchhhhhcCCCCCcchhhhhccC
Q 003886 653 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 728 (789)
Q Consensus 653 ~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~----~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~ 728 (789)
+|+.++++|+.++ .+|++||+|+|+|+||++++.++.+.+++ ++++|+.+|++++.... ..+ ......
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~-----~~~--~~~~~~ 203 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN-----DSF--KTRAEA 203 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC-----THH--HHTTTT
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCC-----cCH--HHhCcc
Confidence 9999999999998 58999999999999999999999876654 99999999998753211 000 000000
Q ss_pred ccccccCCCCCh-hhHHHH--------HhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 729 KGKDSFTESPSV-EDLTRF--------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 729 ~~~~~~~~~~~~-~~~~~~--------~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
..+...... .....| ...+|+...-....|+||+||+.|.. ..++.+++++|++
T Consensus 204 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~--~~~~~~~~~~l~~ 266 (322)
T 3fak_A 204 ---DPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVL--LDDSIKLDAKAKA 266 (322)
T ss_dssp ---CCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTT--HHHHHHHHHHHHH
T ss_pred ---CcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCcc--HHHHHHHHHHHHH
Confidence 000000000 000111 12344433222235999999999987 4678888887753
No 76
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.68 E-value=4.3e-16 Score=165.84 Aligned_cols=189 Identities=16% Similarity=0.206 Sum_probs=128.9
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
++...+| .+.++++.|.+ ...|+||++|||++.. ....|...+..|++ .||.|+++|||+++++.
T Consensus 67 ~~~~~~g-~i~~~~~~p~~----~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~-------- 133 (326)
T 3ga7_A 67 AVPTPYG-DVTTRLYSPQP----TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR-------- 133 (326)
T ss_dssp EECCTTS-CEEEEEEESSS----SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC--------
T ss_pred EeecCCC-CeEEEEEeCCC----CCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC--------
Confidence 4556677 89999999963 2349999999988432 23456667778887 89999999999865532
Q ss_pred CCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhCCCc------eeEEEEeCCccchhhhhcCC
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK------FVAAAARNPLCNLALMVGTT 715 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~p~~------~~a~v~~~pv~~~~~~~~~~ 715 (789)
....++|+.++++|+.++. .+|++||+|+|+|+||++++.++.+++++ ++++|+.+|+.+.....
T Consensus 134 ---~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~--- 207 (326)
T 3ga7_A 134 ---YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSV--- 207 (326)
T ss_dssp ---TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCH---
T ss_pred ---CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCCh---
Confidence 1234789999999999863 47899999999999999999999877654 99999999987642110
Q ss_pred CCCcchhhhhccCccccccCCCCChhhHHHHH---------hcCcc-----ccCCCCCCCEEEEEeCCCCCCChHHHHHH
Q 003886 716 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFH---------SKSPI-----SHISKVKTPTIFLLGAQDLRVPVSNGLQV 781 (789)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~sp~-----~~~~~i~~P~Lii~G~~D~~vp~~~~~~l 781 (789)
....+.. .+. ....+....+. ..+|. ..+.+..+|+||+||+.|.++ .++.++
T Consensus 208 ------~~~~~~~----~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~ 274 (326)
T 3ga7_A 208 ------SRRLFGG----AWD-GLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLL 274 (326)
T ss_dssp ------HHHHCCC----TTT-TCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHH
T ss_pred ------hHhhhcC----CCC-CCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHH
Confidence 0000000 000 00011111111 11222 124446679999999999998 478888
Q ss_pred HHHCCC
Q 003886 782 IYHIPF 787 (789)
Q Consensus 782 ~~~l~~ 787 (789)
+++|++
T Consensus 275 ~~~l~~ 280 (326)
T 3ga7_A 275 HQTLQA 280 (326)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887753
No 77
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.67 E-value=1.2e-16 Score=165.45 Aligned_cols=179 Identities=10% Similarity=0.139 Sum_probs=121.4
Q ss_pred CCCCcEEEEEcCCCCCC---CchhhHHHHHHH----HHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHH
Q 003886 589 CSCDPLIVVLHGGPHSV---SLSSYSKSLAFL----SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDH 661 (789)
Q Consensus 589 ~~~~P~vv~~HGg~~~~---~~~~~~~~~~~l----a~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~ 661 (789)
.++.|+||++|||++.. ....|......| ++.||.|+++|||++++.. ....++|+.+++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~-----------~~~~~~d~~~~~~~ 106 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-----------NPRNLYDAVSNITR 106 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-----------TTHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-----------CCcHHHHHHHHHHH
Confidence 56789999999987542 344677777777 5899999999999754311 12347899999999
Q ss_pred HHHcCCCCCccEEEEEcCccHHHHHHHHHhC-----------------CCceeEEEEeCCccchhhhhcCCCCCcchhhh
Q 003886 662 VIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----------------PDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 724 (789)
Q Consensus 662 l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-----------------p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~ 724 (789)
++++ ++.++++|+|||+||++++.++.++ |++++++|+.+|+.++................
T Consensus 107 l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 184 (273)
T 1vkh_A 107 LVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRL 184 (273)
T ss_dssp HHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHHH
T ss_pred HHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHHH
Confidence 9987 6788999999999999999999885 78999999999988765443211100000111
Q ss_pred hccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 725 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.++. ..+.+. ........+.. .....+++|+|++||++|..||++++.++++.+++
T Consensus 185 ~~~~-~~~~~~--~~~~~~~~~~~----~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~ 240 (273)
T 1vkh_A 185 AFPD-GIQMYE--EEPSRVMPYVK----KALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQD 240 (273)
T ss_dssp HCTT-CGGGCC--CCHHHHHHHHH----HHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHH
T ss_pred Hhcc-cccchh--hcccccChhhh----hcccccCCCEEEEecCCcCCCChHHHHHHHHHHHh
Confidence 1100 000000 00011111100 01223788999999999999999999999988753
No 78
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.67 E-value=9.4e-16 Score=158.30 Aligned_cols=121 Identities=20% Similarity=0.205 Sum_probs=94.6
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
.+|..++...+.|. +.|+||++||.+.+ ...|......|+++||.|+++|+|| +|.+.... .....
T Consensus 11 ~~g~~l~~~~~g~~------~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G---~G~s~~~~---~~~~~ 76 (286)
T 3qit_A 11 FGGNQICLCSWGSP------EHPVVLCIHGILEQ--GLAWQEVALPLAAQGYRVVAPDLFG---HGRSSHLE---MVTSY 76 (286)
T ss_dssp ETTEEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCCS---SGGGC
T ss_pred cCCceEEEeecCCC------CCCEEEEECCCCcc--cchHHHHHHHhhhcCeEEEEECCCC---CCCCCCCC---CCCCc
Confidence 47888888777543 46899999997764 5577788889999999999999998 44443211 11234
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
..+++.+.+..+++. ++.+++.++|||+||++++.++.++|++++++|+.+|...
T Consensus 77 ~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 131 (286)
T 3qit_A 77 SSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLP 131 (286)
T ss_dssp SHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred CHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCC
Confidence 567777777777776 4568899999999999999999999999999999998754
No 79
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.67 E-value=1.6e-16 Score=165.07 Aligned_cols=197 Identities=12% Similarity=0.092 Sum_probs=124.6
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH---HHHHHHHCCcEEEEEcCCCC--C---------CC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGS--L---------GF 635 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~Gy~V~~~d~rGs--~---------G~ 635 (789)
...|.++...++.|++++..+++|+||++||+++. ...|.. ..+.+++.||.|+++|.++. . |.
T Consensus 23 ~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~--~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~ 100 (280)
T 3ls2_A 23 VSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCT--DENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQ 100 (280)
T ss_dssp TTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCC--SHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSST
T ss_pred hhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCC--hhhhhcchhHHHHHhhCCeEEEEeCCccccccccccccccccc
Confidence 34678899999999987667899999999998764 334433 34567788999999997632 1 22
Q ss_pred CchhhccCCC-CC-Cccc-HHHHH-HHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhh
Q 003886 636 GEEALQSLPG-KV-GSQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 711 (789)
Q Consensus 636 G~~~~~~~~~-~~-~~~~-~~D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~ 711 (789)
|..+...... .+ +... ...+. +.+.++.+...+ .+|++|+|||+||++++.++.++|++|+++++.+|+.++...
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~ 179 (280)
T 3ls2_A 101 GAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINC 179 (280)
T ss_dssp TCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGS
T ss_pred CCccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccC
Confidence 2222111111 01 1112 22222 334444444223 489999999999999999999999999999999998875321
Q ss_pred hcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCC----CCCEEEEEeCCCCCCChHH-HHHHHHHCC
Q 003886 712 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV----KTPTIFLLGAQDLRVPVSN-GLQVIYHIP 786 (789)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i----~~P~Lii~G~~D~~vp~~~-~~~l~~~l~ 786 (789)
... ...+...++. ....+...+|...+.++ .+|+||+||++|.+||.+. +.+++++|+
T Consensus 180 ~~~----~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~ 242 (280)
T 3ls2_A 180 PWG----VKAFTGYLGA-------------DKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAK 242 (280)
T ss_dssp HHH----HHHHHHHHCS-------------CGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHH
T ss_pred cch----hhHHHhhcCc-------------hHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHH
Confidence 100 0000111111 01123344555555554 4599999999999999844 667776664
No 80
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.67 E-value=7.5e-16 Score=161.99 Aligned_cols=205 Identities=12% Similarity=0.118 Sum_probs=127.3
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCC
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~ 647 (789)
+...+|..++++.+.|.+. ..++.|+||++||.+.+ ...|......|+++||.|+++|+||.. |.+... ...+
T Consensus 12 i~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~--~~~~~~~~~~L~~~G~~Vi~~D~rGh~--G~S~~~--~~~~ 84 (305)
T 1tht_A 12 LRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARR--MDHFAGLAEYLSTNGFHVFRYDSLHHV--GLSSGS--IDEF 84 (305)
T ss_dssp EEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGG--GGGGHHHHHHHHTTTCCEEEECCCBCC------------CC
T ss_pred EEcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccC--chHHHHHHHHHHHCCCEEEEeeCCCCC--CCCCCc--ccce
Confidence 3455888999988877521 12356899999996653 557888888999999999999999842 433211 1122
Q ss_pred Cc-ccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchh--hh
Q 003886 648 GS-QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY--VE 724 (789)
Q Consensus 648 ~~-~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~--~~ 724 (789)
.. ...+|+.++++++.+. +.++++|+||||||++++.++.+ | +++++|+.++..++...........+.. ..
T Consensus 85 ~~~~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (305)
T 1tht_A 85 TMTTGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDYLSLPID 159 (305)
T ss_dssp CHHHHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCGGGSCGG
T ss_pred ehHHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhhhhcchh
Confidence 21 1246788888888743 45789999999999999999987 7 8999999888754322110000000000 00
Q ss_pred hccCccccccCCCC--ChhhHHHHHhc------CccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 725 SYGSKGKDSFTESP--SVEDLTRFHSK------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 725 ~~~~~~~~~~~~~~--~~~~~~~~~~~------sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
.+.. ... +.... ........... +....+.++++|+|++||++|..+|++.+.++++.++
T Consensus 160 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~ 227 (305)
T 1tht_A 160 ELPN-DLD-FEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIR 227 (305)
T ss_dssp GCCS-EEE-ETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCT
T ss_pred hCcc-ccc-ccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcC
Confidence 0000 000 00000 00001111111 1223578899999999999999999999999998774
No 81
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.66 E-value=2.4e-16 Score=163.44 Aligned_cols=198 Identities=11% Similarity=-0.002 Sum_probs=126.0
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH---HHHHHHHCCcEEEEEcCCCCCCCCc---------
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGE--------- 637 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~Gy~V~~~d~rGs~G~G~--------- 637 (789)
...|..+...++.|+++. .+++|+||++||+++. ...|.. ....+.+.||.|+++|+||.+....
T Consensus 23 ~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~--~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g 99 (278)
T 3e4d_A 23 ETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCT--HANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMG 99 (278)
T ss_dssp TTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCC--SHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSB
T ss_pred cccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCC--ccchhhcccHHHHHhhCCeEEEecCCcccCccccccccccccc
Confidence 446788999999998543 6789999999998764 334444 3345667799999999987332111
Q ss_pred ---hhhccCCC-C-CCcccHH-HHH-HHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhh
Q 003886 638 ---EALQSLPG-K-VGSQDVN-DVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (789)
Q Consensus 638 ---~~~~~~~~-~-~~~~~~~-D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~ 710 (789)
.+...... . ....... .+. ++++++.+...+|+++++|+|||+||++++.++.++|++|+++|+.+|+.++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 179 (278)
T 3e4d_A 100 KGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSS 179 (278)
T ss_dssp TTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGG
T ss_pred CCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccC
Confidence 00000000 0 0111222 222 366666666457789999999999999999999999999999999999887543
Q ss_pred hhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCC--CCCEEEEEeCCCCCCChHH-HHHHHHHCCC
Q 003886 711 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPVSN-GLQVIYHIPF 787 (789)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~Lii~G~~D~~vp~~~-~~~l~~~l~~ 787 (789)
... ....+...++. . ...+...+|...+.++ .+|+||+||++|..||.+. +.+++++|++
T Consensus 180 ~~~----~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 242 (278)
T 3e4d_A 180 ADW----SEPALEKYLGA---------D----RAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKG 242 (278)
T ss_dssp CTT----THHHHHHHHCS---------C----GGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTT
T ss_pred Ccc----chhhHHHhcCC---------c----HHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHH
Confidence 210 00001111111 0 1122334444444433 4699999999999998532 6777777764
No 82
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.66 E-value=8.7e-16 Score=166.27 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=95.4
Q ss_pred eeecCCCeeEEEEEEecCCCC--CCCCCcEEEEEcCCCCCCCchhhH------HHHHHHHHCCcEEEEEcCCCCCCCCch
Q 003886 567 NLTKGAQKPFEAIFVSSSHKK--DCSCDPLIVVLHGGPHSVSLSSYS------KSLAFLSSVGYSLLIVNYRGSLGFGEE 638 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~--~~~~~P~vv~~HGg~~~~~~~~~~------~~~~~la~~Gy~V~~~d~rGs~G~G~~ 638 (789)
.+...||..+.++.+.|.... +.++.|+||++||.+++. ..|. .....|+++||.|+++|+|| +|.+
T Consensus 31 ~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~--~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G---~G~S 105 (377)
T 1k8q_A 31 EVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA--TNWISNLPNNSLAFILADAGYDVWLGNSRG---NTWA 105 (377)
T ss_dssp EEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG--GGGSSSCTTTCHHHHHHHTTCEEEECCCTT---STTS
T ss_pred EeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch--hhhhcCCCcccHHHHHHHCCCCEEEecCCC---CCCC
Confidence 445678999998888764211 113679999999977653 3333 23448999999999999998 4443
Q ss_pred hhcc----CCC---CCCccc-HH-HHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCC---ceeEEEEeCCcc
Q 003886 639 ALQS----LPG---KVGSQD-VN-DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLC 706 (789)
Q Consensus 639 ~~~~----~~~---~~~~~~-~~-D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~---~~~a~v~~~pv~ 706 (789)
.... ... .+...+ .+ |+.+++++++++ .+.++++|+|||+||.+++.++.++|+ +++++|+.+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~ 183 (377)
T 1k8q_A 106 RRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVA 183 (377)
T ss_dssp CEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCS
T ss_pred CCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCch
Confidence 3210 000 111112 34 777889988776 356789999999999999999999998 899999999875
Q ss_pred c
Q 003886 707 N 707 (789)
Q Consensus 707 ~ 707 (789)
.
T Consensus 184 ~ 184 (377)
T 1k8q_A 184 T 184 (377)
T ss_dssp C
T ss_pred h
Confidence 4
No 83
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.66 E-value=9.7e-16 Score=164.90 Aligned_cols=125 Identities=18% Similarity=0.214 Sum_probs=98.7
Q ss_pred CeeEEEEEEecCCCC--------------CCCCCcEEEEEcCCCCCCCch---hhHHHHHHHH-HCCcEEEEEcCCCCCC
Q 003886 573 QKPFEAIFVSSSHKK--------------DCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLS-SVGYSLLIVNYRGSLG 634 (789)
Q Consensus 573 g~~l~~~~~~P~~~~--------------~~~~~P~vv~~HGg~~~~~~~---~~~~~~~~la-~~Gy~V~~~d~rGs~G 634 (789)
+..+.+.++.|++.. ..++.|+||++|||++..... .|......|+ ++||.|+++||||+++
T Consensus 80 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~ 159 (351)
T 2zsh_A 80 RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPE 159 (351)
T ss_dssp TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCC
Confidence 344777788887542 246789999999987643222 3666778888 7899999999999554
Q ss_pred CCchhhccCCCCCCcccHHHHHHHHHHHHHcC----CCCCc-cEEEEEcCccHHHHHHHHHhCCC---ceeEEEEeCCcc
Q 003886 635 FGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLC 706 (789)
Q Consensus 635 ~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~~d~~-rv~l~G~S~GG~~a~~~~~~~p~---~~~a~v~~~pv~ 706 (789)
+. ....++|+.++++++.++. .+|.+ ||+|+|||+||++++.++.++++ +++++|+.+|+.
T Consensus 160 ~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~ 228 (351)
T 2zsh_A 160 NP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMF 228 (351)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCC
T ss_pred CC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCcc
Confidence 21 1234789999999999864 47889 99999999999999999998888 899999999987
Q ss_pred ch
Q 003886 707 NL 708 (789)
Q Consensus 707 ~~ 708 (789)
+.
T Consensus 229 ~~ 230 (351)
T 2zsh_A 229 GG 230 (351)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 84
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.66 E-value=2.3e-16 Score=170.44 Aligned_cols=133 Identities=19% Similarity=0.137 Sum_probs=101.4
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-Cch--hhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 643 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~--~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~ 643 (789)
.+...+|..+.+.++.|.+ ..++.|+||++|||+... ... .|......|+++||.|+++||||.+|+...
T Consensus 86 ~~~~~~g~~l~~~v~~p~~--~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~----- 158 (361)
T 1jkm_A 86 TILGVDGNEITLHVFRPAG--VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH----- 158 (361)
T ss_dssp EEECTTSCEEEEEEEEETT--CCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE-----
T ss_pred eeecCCCCeEEEEEEeCCC--CCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCC-----
Confidence 4455677789999999974 223789999999987332 233 566677889889999999999996544211
Q ss_pred CCCCCcccHHHHHHHHHHHHHcC-CCCCccEEEEEcCccHHHHHHHHHh-----CCCceeEEEEeCCccch
Q 003886 644 PGKVGSQDVNDVLTAIDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQ-----APDKFVAAAARNPLCNL 708 (789)
Q Consensus 644 ~~~~~~~~~~D~~~~i~~l~~~~-~~d~~rv~l~G~S~GG~~a~~~~~~-----~p~~~~a~v~~~pv~~~ 708 (789)
..+...+.|+.++++|+.++. ..+.++|+|+|||+||++++.++.. +|++++++|+.+|+.+.
T Consensus 159 --~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 159 --HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227 (361)
T ss_dssp --CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred --CCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccc
Confidence 123345789999999998762 1123399999999999999999988 78899999999998875
No 85
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.66 E-value=5e-14 Score=150.80 Aligned_cols=281 Identities=5% Similarity=-0.016 Sum_probs=171.0
Q ss_pred ecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003886 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (789)
Q Consensus 102 ~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (789)
...||||+++.+...... . ......++.++.. .++.. .+... .....++|||||+++++....+ ..
T Consensus 46 ~~~s~dg~~l~~~~~~~~-~-~~~~~~v~~~d~~--~~~~~~~~~~~------~~~~~~~~s~dg~~l~v~~~~~---~~ 112 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSR-K-LDKGGVVYRLDPV--TLEVTQAIHND------LKPFGATINNTTQTLWFGNTVN---SA 112 (353)
T ss_dssp EEEETTTTEEEEEECCCT-T-TEESEEEEEECTT--TCCEEEEEEES------SCCCSEEEETTTTEEEEEETTT---TE
T ss_pred eEECCCCCEEEEEcCCCc-C-CCCCccEEEEcCC--CCeEEEEEecC------CCcceEEECCCCCEEEEEecCC---CE
Confidence 345799998855432211 0 1124577887652 22322 22221 2356789999999987765533 25
Q ss_pred EEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCccee
Q 003886 181 QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (789)
Q Consensus 181 ~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (789)
++.++ .+++..+.+.................++.|||||++|++....
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------------------------- 161 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG------------------------------- 161 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-------------------------------
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-------------------------------
Confidence 66666 5666656555432110000000012568999999987765422
Q ss_pred eCCcccccCCccCceEEEEEccCCceEeccCCC-CCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceE
Q 003886 260 EEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (789)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~-~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~ 338 (789)
....|+++|+.+++.... .+ .......++|+|||+. |++.. ....|+
T Consensus 162 -----------~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~s~dg~~----l~~~~---------------~~~~i~ 209 (353)
T 3vgz_A 162 -----------KESVIWVVDGGNIKLKTA--IQNTGKMSTGLALDSEGKR----LYTTN---------------ADGELI 209 (353)
T ss_dssp -----------SSCEEEEEETTTTEEEEE--ECCCCTTCCCCEEETTTTE----EEEEC---------------TTSEEE
T ss_pred -----------CCceEEEEcCCCCceEEE--ecCCCCccceEEECCCCCE----EEEEc---------------CCCeEE
Confidence 135799999999887655 23 2334678899999997 66654 123688
Q ss_pred EEecccccchhhhhhhhcCCCCCCCee-ecCC----CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCC
Q 003886 339 AVRVSLYKSEASELELKESSSEDLPVV-NLTE----SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (789)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~----~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~ 413 (789)
++|+ .+++.. .+.. ........+|+|||++|+..... ...|+++|..+
T Consensus 210 ~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------~~~v~~~d~~~ 262 (353)
T 3vgz_A 210 TIDT-----------------ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK----------AAEVLVVDTRN 262 (353)
T ss_dssp EEET-----------------TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS----------SSEEEEEETTT
T ss_pred EEEC-----------------CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC----------CCEEEEEECCC
Confidence 8997 444433 3322 12234457999999988665532 24699999877
Q ss_pred CCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeE
Q 003886 414 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS 493 (789)
Q Consensus 414 ~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~ 493 (789)
++... ... .. ....+.|+|||+++|++...+ ..|+.+|+.+++..............
T Consensus 263 ~~~~~-------~~~---~~-----------~~~~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~ 319 (353)
T 3vgz_A 263 GNILA-------KVA---AP-----------ESLAVLFNPARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDTPTHPNSL 319 (353)
T ss_dssp CCEEE-------EEE---CS-----------SCCCEEEETTTTEEEEEETTT--TEEEEEETTTTEEEEEEECCSEEEEE
T ss_pred CcEEE-------EEE---cC-----------CCceEEECCCCCEEEEEECCC--CeEEEEECCCCeEEEEEecCCCCCeE
Confidence 54321 111 00 123578999999887765333 36778899888877655544444556
Q ss_pred EeeecCCEEEEEEeC
Q 003886 494 LLTLDGDNIIAVSSS 508 (789)
Q Consensus 494 ~~s~dg~~l~~~~ss 508 (789)
.+++||+.++++..+
T Consensus 320 ~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEEEcc
Confidence 889999988877766
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.66 E-value=2.2e-14 Score=156.27 Aligned_cols=243 Identities=14% Similarity=0.106 Sum_probs=163.2
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
.+..++|||||++|++....+ ..+...+ ..++..+.+.....+ ..+.|||||++|++....
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v----------~~~~~spdg~~l~~~~~~----- 94 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHS---NDVSIIDTATNNVIATVPAGSSP----------QGVAVSPDGKQVYVTNMA----- 94 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGG---TEEEEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEETT-----
T ss_pred CcceEEECCCCCEEEEECCCC---CeEEEEECCCCeEEEEEECCCCc----------cceEECCCCCEEEEEECC-----
Confidence 467899999999997765332 1344333 456665555543333 789999999999876432
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (789)
...|++||+.+++.... ......+..++|+|||+. |
T Consensus 95 --------------------------------------~~~v~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l 130 (391)
T 1l0q_A 95 --------------------------------------SSTLSVIDTTSNTVAGT--VKTGKSPLGLALSPDGKK----L 130 (391)
T ss_dssp --------------------------------------TTEEEEEETTTTEEEEE--EECSSSEEEEEECTTSSE----E
T ss_pred --------------------------------------CCEEEEEECCCCeEEEE--EeCCCCcceEEECCCCCE----E
Confidence 25799999999987665 344456788999999998 7
Q ss_pred EEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCC
Q 003886 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (789)
Q Consensus 314 ~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~ 393 (789)
++++. ....|+++|+ .+++...............|+|||++|+.....+
T Consensus 131 ~~~~~--------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 131 YVTNN--------------GDKTVSVINT-----------------VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EEEET--------------TTTEEEEEET-----------------TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT
T ss_pred EEEeC--------------CCCEEEEEEC-----------------CCCcEEEEEecCCCcceEEECCCCCEEEEEeCCC
Confidence 66652 2337999998 4554443333334457889999999886665432
Q ss_pred CCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003886 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (789)
Q Consensus 394 ~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~ 473 (789)
..|++||+.++..... .. .. ..+..+.|+|||+.|++.........|+.+
T Consensus 180 ----------~~v~~~d~~~~~~~~~-------~~---~~----------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 180 ----------MSISVIDTVTNSVIDT-------VK---VE----------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp ----------TEEEEEETTTTEEEEE-------EE---CS----------SEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred ----------CEEEEEECCCCeEEEE-------Ee---cC----------CCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 3699999877543211 10 00 012356799999988877654355678888
Q ss_pred ECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 474 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 474 dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
|+.+++.......+.......++++|+.++++.+.. ..+.+.++.++
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~ 276 (391)
T 1l0q_A 230 DTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX---NTVSVIDTATN 276 (391)
T ss_dssp ETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTT
T ss_pred ECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC---CEEEEEECCCC
Confidence 998888766555444444567899999887776544 34777776543
No 87
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.66 E-value=3.5e-16 Score=154.87 Aligned_cols=155 Identities=10% Similarity=0.045 Sum_probs=109.6
Q ss_pred CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhcc-----C-CCCC----CcccHHHHHH
Q 003886 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQS-----L-PGKV----GSQDVNDVLT 657 (789)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~-----~-~~~~----~~~~~~D~~~ 657 (789)
...+.| ||++||.+.+ ...|......|+ .||.|+++|.++..+.+..+... . .+.. .....+++.+
T Consensus 13 ~~~~~p-vv~lHG~g~~--~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 88 (209)
T 3og9_A 13 RKDLAP-LLLLHSTGGD--EHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTD 88 (209)
T ss_dssp CTTSCC-EEEECCTTCC--TTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHH
T ss_pred CCCCCC-EEEEeCCCCC--HHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHH
Confidence 345778 9999997654 456666777776 78999999965322112222110 0 0001 0112455666
Q ss_pred HHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCC
Q 003886 658 AIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTES 737 (789)
Q Consensus 658 ~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (789)
.++.+.++..+|.++++|+|||+||++++.++.++|++++++|+.+|......
T Consensus 89 ~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------------- 141 (209)
T 3og9_A 89 EVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF--------------------------- 141 (209)
T ss_dssp HHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC---------------------------
T ss_pred HHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc---------------------------
Confidence 66666666557889999999999999999999999999999999988643100
Q ss_pred CChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 738 PSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 738 ~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.......++|+|++||++|.+||++++.++++.|++
T Consensus 142 --------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~ 177 (209)
T 3og9_A 142 --------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLED 177 (209)
T ss_dssp --------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHH
T ss_pred --------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHH
Confidence 011235678999999999999999999999988764
No 88
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.65 E-value=2.5e-16 Score=166.30 Aligned_cols=129 Identities=18% Similarity=0.211 Sum_probs=101.7
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHHHC-CcEEEEEcCCCCCCCCchhhccCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~~-Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
.+...+| .+.++++.|.+. .++.|+||++|||++.. ....|......|+++ ||.|+++||||.+++..
T Consensus 52 ~i~~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~------- 121 (310)
T 2hm7_A 52 DMDLPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKF------- 121 (310)
T ss_dssp EEEETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT-------
T ss_pred EeccCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCC-------
Confidence 3445556 899999999742 46789999999977432 344677778888875 99999999998654321
Q ss_pred CCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhCCC----ceeEEEEeCCccchh
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLA 709 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~p~----~~~a~v~~~pv~~~~ 709 (789)
....+|+.++++++.++. .+|.++|+|+|||+||++++.++.++|+ +++++|+.+|..+..
T Consensus 122 ----~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~ 189 (310)
T 2hm7_A 122 ----PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYD 189 (310)
T ss_dssp ----THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCC
T ss_pred ----CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCC
Confidence 234789999999998864 3678999999999999999999987765 699999999987653
No 89
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.65 E-value=2.7e-16 Score=159.42 Aligned_cols=181 Identities=19% Similarity=0.176 Sum_probs=119.1
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCC-CCcccHHHHHHHHHHHHHcCCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK-VGSQDVNDVLTAIDHVIDMGLA 668 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~~~ 668 (789)
++.|+||++||.+.+ ...|......|+++||.|+++|+||. |.+........ ......+|+.++++++..+
T Consensus 20 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~---g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~--- 91 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGS--PNDMNFMARALQRSGYGVYVPLFSGH---GTVEPLDILTKGNPDIWWAESSAAVAHMTAK--- 91 (251)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTTC---SSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT---
T ss_pred CCCceEEEeCCCCCC--HHHHHHHHHHHHHCCCEEEecCCCCC---CCCChhhhcCcccHHHHHHHHHHHHHHHHHh---
Confidence 356889999997664 55777888899999999999999984 43311100000 1111257788888888765
Q ss_pred CCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcc-hhhhhccCccccccCCCCCh-------
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW-CYVESYGSKGKDSFTESPSV------- 740 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------- 740 (789)
.++++|+|||+||++++.++.++|++++++++.+|......... +.+ .+...+. ......+..
T Consensus 92 -~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 162 (251)
T 3dkr_A 92 -YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLV----PGFLKYAEYMN----RLAGKSDESTQILAYL 162 (251)
T ss_dssp -CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHH----HHHHHHHHHHH----HHHTCCCCHHHHHHHH
T ss_pred -cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhh----HHHHHHHHHHH----hhcccCcchhhHHhhh
Confidence 57999999999999999999999999999999998865311000 000 0000000 000000000
Q ss_pred -hhHHHHHh--cCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 741 -EDLTRFHS--KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 741 -~~~~~~~~--~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.....+.. ......+.++++|+|+++|++|..+|++.+.++++.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 212 (251)
T 3dkr_A 163 PGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALIN 212 (251)
T ss_dssp HHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcC
Confidence 00111111 112345778899999999999999999999999999876
No 90
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.65 E-value=4.4e-15 Score=175.56 Aligned_cols=266 Identities=9% Similarity=0.107 Sum_probs=166.1
Q ss_pred CCCCCeEEEEecCCCC-CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCC
Q 003886 162 SPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 239 (789)
Q Consensus 162 SPdG~~la~~~~~~~~-~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 239 (789)
+|||++++|+++.++. ...+|.+. .+++.+.+++...-..+. ...+..++|||||++|||......
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDg~~la~~~~~~G--------- 147 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDG---TVALRGYAFSEDGEYFAYGLSASG--------- 147 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTS---CEEEEEEEECTTSSEEEEEEEETT---------
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCC---CEEEEEEEECCCCCEEEEEEcCCC---------
Confidence 4999999999876532 33677777 456666666542211110 012368999999999999876531
Q ss_pred CCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeec
Q 003886 240 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 319 (789)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~ 319 (789)
.....|+++|+++|+...+ +.....+..++|||||+. |+|++..
T Consensus 148 ------------------------------~~~~~i~v~d~~tg~~~~~--~~~~~~~~~~~wspDg~~----l~~~~~~ 191 (710)
T 2xdw_A 148 ------------------------------SDWVTIKFMKVDGAKELPD--VLERVKFSCMAWTHDGKG----MFYNAYP 191 (710)
T ss_dssp ------------------------------CSCEEEEEEETTTTEEEEE--EEEEECSCCEEECTTSSE----EEEEECC
T ss_pred ------------------------------CceEEEEEEECCCCCCCcc--cccCcccceEEEEeCCCE----EEEEEEC
Confidence 1235899999999988765 222333678999999999 9998854
Q ss_pred CCce-eeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe--eec-CC--CCCccCcceecCCCCEEEEEecCC
Q 003886 320 SETR-KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNL-TE--SISSAFFPRFSPDGKFLVFLSAKS 393 (789)
Q Consensus 320 ~~~~-~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~L-t~--~~~~~~~p~~SpDG~~la~~s~~~ 393 (789)
.... ..+.....++...||++++ .++.. +.+ +. +......+.|||||++|++.+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l-----------------~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 254 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVL-----------------GTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG 254 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS
T ss_pred CccccccccccccCCCCEEEEEEC-----------------CCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc
Confidence 3310 0011111234567999998 44432 222 22 123356899999999999998654
Q ss_pred CCCCCCccccceeEEeecCC------CC--CCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeC
Q 003886 394 SVDSGAHSATDSLHRIDWPT------NG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 465 (789)
Q Consensus 394 ~~~~g~~~~~~~L~~~d~~~------~~--~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~ 465 (789)
. ....+||++|+.+ +. .+.++... . .....|++||+.|+|.+..+
T Consensus 255 ~------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~---------------~------~~~~~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 255 C------DPVNRLWYCDLQQESNGITGILKWVKLIDNF---------------E------GEYDYVTNEGTVFTFKTNRH 307 (710)
T ss_dssp S------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSS---------------S------SCEEEEEEETTEEEEEECTT
T ss_pred C------CCccEEEEEECcccccccCCccceEEeeCCC---------------C------cEEEEEeccCCEEEEEECCC
Confidence 1 1146899999876 32 11111100 0 01225899999999998755
Q ss_pred C-eEEEEEEECCCCc---EEEecCCCC--CceeEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 466 S-SQVIISVNVSSGE---LLRITPAES--NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 466 ~-~~~l~~~dl~tg~---~~~lt~~~~--~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
+ ...|+.+|+++++ .+.++.... ......++ +++.++++..... -..|+++++.
T Consensus 308 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g-~~~l~~~~~~ 367 (710)
T 2xdw_A 308 SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDV-KNTLQLHDLA 367 (710)
T ss_dssp CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETT-EEEEEEEETT
T ss_pred CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECC-EEEEEEEECC
Confidence 3 6789999998875 466665543 22223444 4677777765543 3457777763
No 91
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.65 E-value=5e-16 Score=170.12 Aligned_cols=137 Identities=17% Similarity=0.104 Sum_probs=92.4
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc---------hhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCC
Q 003886 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL---------SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~---------~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
..+.|+++.|.+..+.+++|+||++||+++.... ..|......|+++||.|+++|+||.++.+........
T Consensus 61 ~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~ 140 (397)
T 3h2g_A 61 ATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLH 140 (397)
T ss_dssp EEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTC
T ss_pred EEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhh
Confidence 5799999999865556789999999998775322 1144567788999999999999995433211100000
Q ss_pred CCCCcccHHHHHHHHHHHHHc-CCCCCccEEEEEcCccHHHHHHHHHh-CC-----CceeEEEEeCCccchhh
Q 003886 645 GKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQ-AP-----DKFVAAAARNPLCNLAL 710 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~~~~-~p-----~~~~a~v~~~pv~~~~~ 710 (789)
......++.|..+++..+.++ +..|.++|+|+|||+||+++++++.. .+ ..+.+++..++..++..
T Consensus 141 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (397)
T 3h2g_A 141 SASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYALEQ 213 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccHHH
Confidence 000012355566666666554 44457899999999999999888632 22 26888888888887753
No 92
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.65 E-value=8.4e-16 Score=147.31 Aligned_cols=144 Identities=10% Similarity=0.110 Sum_probs=108.0
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
++.|+||++||.+.+.....+......|+++||.|+++|+|| +|.+.... ......+++.++++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g---~g~s~~~~----~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTD---LDARRDLG----QLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHH---HHTCGGGC----TTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCC---CCCCCCCC----CCCCHHHHHHHHHHHHHhcC--C
Confidence 467999999998765433344467788999999999999997 33332111 11112345555677776653 4
Q ss_pred CccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhc
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 749 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (789)
.++++++|||+||.+++.++.++| ++++|+.+|..+...+ +
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------~----------- 113 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------P----------- 113 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB--------------------------C-----------
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc--------------------------C-----------
Confidence 589999999999999999999887 9999999987643110 0
Q ss_pred CccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 750 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 750 sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
.+.++++|+|++||++|..+|++++.++++.+
T Consensus 114 ----~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 145 (176)
T 2qjw_A 114 ----ALDAAAVPISIVHAWHDELIPAADVIAWAQAR 145 (176)
T ss_dssp ----CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH
T ss_pred ----cccccCCCEEEEEcCCCCccCHHHHHHHHHhC
Confidence 05678899999999999999999999998876
No 93
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.65 E-value=8.9e-16 Score=175.67 Aligned_cols=207 Identities=14% Similarity=0.099 Sum_probs=143.3
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-hhHHHH-HHHHHCCcEEEEEcCCCCCCCCchhhccCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~-~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
.++..||..|.+.++.|. ..+++|+||+.||.+...... .|.... +.|+++||+|+.+|+||+++.+..+..
T Consensus 13 ~i~~~DG~~L~~~~~~P~---~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~--- 86 (587)
T 3i2k_A 13 MVPMRDGVRLAVDLYRPD---ADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP--- 86 (587)
T ss_dssp EEECTTSCEEEEEEEEEC---CSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT---
T ss_pred EEECCCCCEEEEEEEECC---CCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc---
Confidence 456678999999999997 346889999999854431111 122123 789999999999999997766544321
Q ss_pred CCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc-cchhhhh-cCCCCC----
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL-CNLALMV-GTTDIP---- 718 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv-~~~~~~~-~~~~~~---- 718 (789)
...+.+|+.++++|+.++++.+ .+|+++|+||||++++.++.++|+.++|+|+.++. .++..-. ......
T Consensus 87 ---~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG~~~~~~ 162 (587)
T 3i2k_A 87 ---HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGALSVEA 162 (587)
T ss_dssp ---TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTCCCCHHH
T ss_pred ---ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCCccccch
Confidence 2357899999999999887665 89999999999999999999989999999999998 7653211 111111
Q ss_pred --cchhhhhc-------------------------------cCccc-------------ccc-CCCCChhhHHHHHhcCc
Q 003886 719 --DWCYVESY-------------------------------GSKGK-------------DSF-TESPSVEDLTRFHSKSP 751 (789)
Q Consensus 719 --~~~~~~~~-------------------------------~~~~~-------------~~~-~~~~~~~~~~~~~~~sp 751 (789)
.|...... ....+ ..+ ...+ .....|.+.++
T Consensus 163 ~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~yw~~~s~ 240 (587)
T 3i2k_A 163 LLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHP--DNDESWQSISL 240 (587)
T ss_dssp HHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCC--SCCHHHHTTCC
T ss_pred HHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCC--CCChHHhcCCh
Confidence 12110000 00000 000 1111 11234667777
Q ss_pred cccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 752 ISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 752 ~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
...+++|++|+|+++|..|..+ ..+.++|++|+.
T Consensus 241 ~~~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~ 274 (587)
T 3i2k_A 241 FERLGGLATPALITAGWYDGFV--GESLRTFVAVKD 274 (587)
T ss_dssp HHHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTT
T ss_pred hhhhccCCCCEEEEccCCCccc--hHHHHHHHHHhh
Confidence 7889999999999999999864 457888988864
No 94
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.65 E-value=3.7e-16 Score=165.25 Aligned_cols=126 Identities=24% Similarity=0.233 Sum_probs=99.2
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~-~~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
.+...+| .+.++++.|. ..++.|+||++|||++. .....|...+..|++ .||.|+++||||.+.+.
T Consensus 55 ~i~~~~g-~~~~~~~~P~---~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~-------- 122 (313)
T 2wir_A 55 TIPGRGG-PIRARVYRPR---DGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHK-------- 122 (313)
T ss_dssp EEEETTE-EEEEEEEECS---CCSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCTTTSC--------
T ss_pred EeeCCCC-cEEEEEEecC---CCCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCCCCCC--------
Confidence 4455556 8999999997 34568999999998732 234567777888887 59999999999854321
Q ss_pred CCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhCCCc----eeEEEEeCCccc
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCN 707 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~p~~----~~a~v~~~pv~~ 707 (789)
.....+|+.++++++.+.. .+|+++|+|+|+|+||.+++.++.+++++ ++++|+.+|+.+
T Consensus 123 ---~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 189 (313)
T 2wir_A 123 ---FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVN 189 (313)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred ---CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccC
Confidence 1234789999999998752 26778999999999999999999887776 999999999887
No 95
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.65 E-value=7.5e-16 Score=154.98 Aligned_cols=176 Identities=16% Similarity=0.137 Sum_probs=126.3
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCC---------
Q 003886 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK--------- 646 (789)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~--------- 646 (789)
+..+++.|.+ +.|+||++||.+.+ ...|......|+++||.|+++|+|| +|.+........
T Consensus 13 ~~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~~~~~~~~ 82 (238)
T 1ufo_A 13 LSVLARIPEA-----PKALLLALHGLQGS--KEHILALLPGYAERGFLLLAFDAPR---HGEREGPPPSSKSPRYVEEVY 82 (238)
T ss_dssp EEEEEEEESS-----CCEEEEEECCTTCC--HHHHHHTSTTTGGGTEEEEECCCTT---STTSSCCCCCTTSTTHHHHHH
T ss_pred EEEEEEecCC-----CccEEEEECCCccc--chHHHHHHHHHHhCCCEEEEecCCC---CccCCCCCCcccccchhhhHH
Confidence 4445677752 77999999997653 4566666678888999999999998 343321111000
Q ss_pred -CCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhh
Q 003886 647 -VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (789)
Q Consensus 647 -~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~ 725 (789)
......+|+.++++++.+++. ++++++|||+||.+++.++.++|++++++++.++...... ...
T Consensus 83 ~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~-------~~~----- 147 (238)
T 1ufo_A 83 RVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL-------PQG----- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC-------CTT-----
T ss_pred HHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchh-------hhh-----
Confidence 011236788888888887652 7899999999999999999999999999988876532110 000
Q ss_pred ccCccccccCCCCChhhHHHHHhcCccccCCCC-CCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 726 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
+...+ +....+...++...+.++ ++|+|++||++|..+|++.+.++++.++
T Consensus 148 --------~~~~~--~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 199 (238)
T 1ufo_A 148 --------QVVED--PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALR 199 (238)
T ss_dssp --------CCCCC--HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHG
T ss_pred --------hccCC--cccchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHh
Confidence 00111 224555666777778888 8999999999999999999999999886
No 96
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=2.7e-15 Score=160.74 Aligned_cols=248 Identities=11% Similarity=0.053 Sum_probs=155.5
Q ss_pred ccEEEEeCCCCCeEEEEecCCC-----CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeec
Q 003886 155 GASAVVPSPSGSKLLVVRNPEN-----ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 228 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~-----~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~ 228 (789)
.+..|++ ||++|||+....+ ...+++.+. .+++.+++ ... ..+.|||||++|||++.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~----------~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENA----------TMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESC----------EEEEECTTSSEEEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccC----------CCeEECCCCCEEEEEEec
Confidence 3667888 9999999864321 134566666 45555444 223 689999999999998764
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCC
Q 003886 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 308 (789)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~ 308 (789)
.. ....+||++|+++|+.+.+. .... +..+.|||||+.
T Consensus 80 ~~---------------------------------------~~~~~l~~~~~~~g~~~~l~--~~~~-~~~~~wspdg~~ 117 (347)
T 2gop_A 80 EE---------------------------------------KKVSEIWVADLETLSSKKIL--EAKN-IRSLEWNEDSRK 117 (347)
T ss_dssp TT---------------------------------------TTEEEEEEEETTTTEEEEEE--EESE-EEEEEECTTSSE
T ss_pred cC---------------------------------------CCcceEEEEECCCCceEEEE--cCCC-ccceeECCCCCE
Confidence 31 02367999999999988883 3333 788999999999
Q ss_pred CccEEEEEeecCCce------------eeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe-eecCCCCCccC
Q 003886 309 LHQYLVFVGWSSETR------------KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAF 375 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~------------~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt~~~~~~~ 375 (789)
|+|.+...... ..|..+.......||++|+ .+++. +.|+. . ...
T Consensus 118 ----l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~-----------------~~~~~~~~l~~-~-~~~ 174 (347)
T 2gop_A 118 ----LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT-----------------ESEEVIEEFEK-P-RFS 174 (347)
T ss_dssp ----EEEEEECCCC---------CCCC---------CEEEEEEEET-----------------TTTEEEEEEEE-E-TTC
T ss_pred ----EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC-----------------CCCeEEeeecC-C-Ccc
Confidence 99987531100 0010011112357999998 66776 77776 4 678
Q ss_pred cceecCCCCEEEEEecCCCCCCCCccc-cceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC
Q 003886 376 FPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (789)
Q Consensus 376 ~p~~SpDG~~la~~s~~~~~~~g~~~~-~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (789)
.+.||||| |+|.+...... .... ..+||++| +++.+.++.. . .. ..++||
T Consensus 175 ~~~~spdg--~~~~~~~~~~~--~~~~~~~~l~~~d--~~~~~~l~~~-~--------------------~~--~~~spd 225 (347)
T 2gop_A 175 SGIWHRDK--IVVNVPHREII--PQYFKFWDIYIWE--DGKEEKMFEK-V--------------------SF--YAVDSD 225 (347)
T ss_dssp EEEEETTE--EEEEEECCCSS--CCSSCCEEEEEEE--TTEEEEEEEE-E--------------------SE--EEEEEC
T ss_pred cccCCCCe--EEEEEeccccc--ccccccccEEEeC--CCceEEeccC-c--------------------ce--eeECCC
Confidence 89999999 77776543100 0001 35799998 4433222211 0 01 124899
Q ss_pred CCEEEEEEEeC-----CeEEEEEEECCCCcEEEecCCCC-Ccee-EEeeecCCEEEEEEeCCCCCCeEEEEe
Q 003886 455 GCTMLLSSIWG-----SSQVIISVNVSSGELLRITPAES-NFSW-SLLTLDGDNIIAVSSSPVDVPQVKYGY 519 (789)
Q Consensus 455 g~~l~~~~~~~-----~~~~l~~~dl~tg~~~~lt~~~~-~~~~-~~~s~dg~~l~~~~ss~~~p~~i~~~~ 519 (789)
|++|++.+... ....||.+| +|+.++++.... .+.. ..|+ |+ ++++.+... ...|+ ++
T Consensus 226 g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~-~~~l~-~~ 290 (347)
T 2gop_A 226 GERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG-SVNLY-IW 290 (347)
T ss_dssp SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETT-EEEEE-EE
T ss_pred CCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCC-cEEEE-Ec
Confidence 99998887554 246899999 788888887643 3332 4566 65 665554443 34566 55
No 97
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.64 E-value=1.6e-15 Score=149.82 Aligned_cols=161 Identities=16% Similarity=0.267 Sum_probs=118.1
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH--HHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~--~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
.+|..++++.+.|. ..++.|+||++||++.+ ...|.. ....|+++||.|+++|+|| +|.+..........
T Consensus 14 ~~g~~l~~~~~~p~---~~~~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~ 85 (210)
T 1imj_A 14 VQGQALFFREALPG---SGQARFSVLLLHGIRFS--SETWQNLGTLHRLAQAGYRAVAIDLPG---LGHSKEAAAPAPIG 85 (210)
T ss_dssp ETTEEECEEEEECS---SSCCSCEEEECCCTTCC--HHHHHHHTHHHHHHHTTCEEEEECCTT---SGGGTTSCCSSCTT
T ss_pred eCCeEEEEEEeCCC---CCCCCceEEEECCCCCc--cceeecchhHHHHHHCCCeEEEecCCC---CCCCCCCCCcchhh
Confidence 37889999999886 34578999999997764 455665 4778999999999999998 55443322111111
Q ss_pred cc-cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhcc
Q 003886 649 SQ-DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (789)
Q Consensus 649 ~~-~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~ 727 (789)
.. ..+++.+.++.+ +.++++++|||+||.+++.++.++|++++++|+.+|......
T Consensus 86 ~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~----------------- 142 (210)
T 1imj_A 86 ELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI----------------- 142 (210)
T ss_dssp SCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS-----------------
T ss_pred hcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc-----------------
Confidence 11 114555555543 457899999999999999999999999999999998753100
Q ss_pred CccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 728 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
....+.++++|+|+++|++|. +|++.+.++ +.+++
T Consensus 143 -----------------------~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~~ 177 (210)
T 1imj_A 143 -----------------------NAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQLPN 177 (210)
T ss_dssp -----------------------CHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSSS
T ss_pred -----------------------cchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCCC
Confidence 011234678999999999999 999999988 76654
No 98
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.63 E-value=4.6e-16 Score=166.50 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=96.7
Q ss_pred eeEEEEEEecCCC-CCCCCCcEEEEEcCCCCCCCc---hhhHHHHHHHH-HCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 574 KPFEAIFVSSSHK-KDCSCDPLIVVLHGGPHSVSL---SSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 574 ~~l~~~~~~P~~~-~~~~~~P~vv~~HGg~~~~~~---~~~~~~~~~la-~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
..+.+.++.|++. ...++.|+||++|||++.... ..|...+..|+ +.||.|+++||||.+++. .
T Consensus 64 ~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~-----------~ 132 (338)
T 2o7r_A 64 HNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR-----------L 132 (338)
T ss_dssp TTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC-----------T
T ss_pred CCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC-----------C
Confidence 3466778888643 235788999999998854322 23666777887 789999999999854321 1
Q ss_pred cccHHHHHHHHHHHHHcC------CCCCccEEEEEcCccHHHHHHHHHhCCC--------ceeEEEEeCCccch
Q 003886 649 SQDVNDVLTAIDHVIDMG------LANPSKVTVVGGSHGGFLTTHLIGQAPD--------KFVAAAARNPLCNL 708 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~------~~d~~rv~l~G~S~GG~~a~~~~~~~p~--------~~~a~v~~~pv~~~ 708 (789)
...++|+.++++|+.++. .+|.+|++|+|||+||++++.++.++|+ +++++|+.+|+.+.
T Consensus 133 ~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~ 206 (338)
T 2o7r_A 133 PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGG 206 (338)
T ss_dssp THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCC
T ss_pred chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCC
Confidence 234789999999998762 2577899999999999999999998887 89999999998754
No 99
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.63 E-value=1.8e-15 Score=160.18 Aligned_cols=128 Identities=18% Similarity=0.249 Sum_probs=102.1
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHH-HCCcEEEEEcCCCCCCCCchhhccCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la-~~Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
++...+|..+.++++.|.+ ++.|+||++|||++.. ....+...+..|+ +.||.|+++|||+++++.
T Consensus 64 ~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-------- 131 (317)
T 3qh4_A 64 VVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP-------- 131 (317)
T ss_dssp EEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC--------
T ss_pred EecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC--------
Confidence 5566788899999999963 6789999999987533 2335666777777 569999999999865532
Q ss_pred CCCCcccHHHHHHHHHHHHHc---CCCCCccEEEEEcCccHHHHHHHHHhCCC----ceeEEEEeCCccchh
Q 003886 645 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLA 709 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~~~~~p~----~~~a~v~~~pv~~~~ 709 (789)
....++|+.++++|+.++ ..+|++||+|+|+|+||++++.++.++++ .++++++.+|+++..
T Consensus 132 ---~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 132 ---YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred ---CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 133478999999999885 34788999999999999999999987554 499999999998753
No 100
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.63 E-value=6.8e-15 Score=150.27 Aligned_cols=194 Identities=14% Similarity=0.160 Sum_probs=125.3
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCC
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~ 647 (789)
+...+|.+++....- +.|.||++||++.+ ...|......|+ +||.|+++|+|| +|.+....
T Consensus 7 ~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~-~~~~vi~~d~~G---~G~S~~~~----- 67 (262)
T 3r0v_A 7 VPSSDGTPIAFERSG--------SGPPVVLVGGALST--RAGGAPLAERLA-PHFTVICYDRRG---RGDSGDTP----- 67 (262)
T ss_dssp EECTTSCEEEEEEEE--------CSSEEEEECCTTCC--GGGGHHHHHHHT-TTSEEEEECCTT---STTCCCCS-----
T ss_pred EEcCCCcEEEEEEcC--------CCCcEEEECCCCcC--hHHHHHHHHHHh-cCcEEEEEecCC---CcCCCCCC-----
Confidence 455678888755442 24789999997764 456777777887 899999999998 55443211
Q ss_pred CcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcch--hhhh
Q 003886 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC--YVES 725 (789)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~--~~~~ 725 (789)
...++++.+.+..+++. ++ +++.++|||+||.+++.++.++| +++++|+.+|............ ..+. ....
T Consensus 68 -~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~ 141 (262)
T 3r0v_A 68 -PYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVP-PDYQTRLDAL 141 (262)
T ss_dssp -SCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCC-TTHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhh-hHHHHHHHHH
Confidence 34566777666666665 34 79999999999999999999999 9999999998764322111000 0000 0000
Q ss_pred ccC--------ccccccCCCCChhhHHHHH------------------------hcCccccCCCCCCCEEEEEeCCCCCC
Q 003886 726 YGS--------KGKDSFTESPSVEDLTRFH------------------------SKSPISHISKVKTPTIFLLGAQDLRV 773 (789)
Q Consensus 726 ~~~--------~~~~~~~~~~~~~~~~~~~------------------------~~sp~~~~~~i~~P~Lii~G~~D~~v 773 (789)
+.. .........+ .+..+.+. ...+...+.++++|+|+++|++|..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 220 (262)
T 3r0v_A 142 LAEGRRGDAVTYFMTEGVGVP-PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAW 220 (262)
T ss_dssp HHTTCHHHHHHHHHHHTSCCC-HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHH
T ss_pred hhccchhhHHHHHhhcccCCC-HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCC
Confidence 000 0000000111 11111111 01223457889999999999999999
Q ss_pred ChHHHHHHHHHCCC
Q 003886 774 PVSNGLQVIYHIPF 787 (789)
Q Consensus 774 p~~~~~~l~~~l~~ 787 (789)
|++.+.++.+.+++
T Consensus 221 ~~~~~~~~~~~~~~ 234 (262)
T 3r0v_A 221 IRHTAQELADTIPN 234 (262)
T ss_dssp HHHHHHHHHHHSTT
T ss_pred CHHHHHHHHHhCCC
Confidence 99999999998865
No 101
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.63 E-value=2.5e-16 Score=155.80 Aligned_cols=159 Identities=14% Similarity=0.086 Sum_probs=108.3
Q ss_pred CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHH---
Q 003886 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVID--- 664 (789)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~--- 664 (789)
..+..++||++||.+. ....|....+.|...|+.|++||.+|...|+..+..... .....+++..+.++.+++
T Consensus 18 ~~~a~~~Vv~lHG~G~--~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~ 93 (210)
T 4h0c_A 18 VQRAKKAVVMLHGRGG--TAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQ--QNQPALDSALALVGEVVAEIE 93 (210)
T ss_dssp TTTCSEEEEEECCTTC--CHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGG--GGTTHHHHHHHHHHHHHHHHH
T ss_pred cccCCcEEEEEeCCCC--CHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcc--cchHHHHHHHHHHHHHHHHHH
Confidence 3556799999999544 244555556677778999999999876555443322111 111223444444444332
Q ss_pred cCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHH
Q 003886 665 MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 744 (789)
Q Consensus 665 ~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (789)
...+|++||+|+|+|+||++++.++.++|++|+++|+.++....... .. .
T Consensus 94 ~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~--------------------------~~-~--- 143 (210)
T 4h0c_A 94 AQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL--------------------------AI-G--- 143 (210)
T ss_dssp HTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC--------------------------CG-G---
T ss_pred HhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh--------------------------hh-h---
Confidence 23489999999999999999999999999999999998874310000 00 0
Q ss_pred HHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 745 RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 745 ~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
. ......++|+|++||++|++||+++++++++.|++
T Consensus 144 ---~----~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~ 179 (210)
T 4h0c_A 144 ---N----YKGDFKQTPVFISTGNPDPHVPVSRVQESVTILED 179 (210)
T ss_dssp ---G----CCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHH
T ss_pred ---h----hhhhccCCceEEEecCCCCccCHHHHHHHHHHHHH
Confidence 0 00112357999999999999999999999998864
No 102
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=7.2e-15 Score=173.21 Aligned_cols=268 Identities=13% Similarity=0.102 Sum_probs=166.5
Q ss_pred EEEeCCCCCeEEEEecCCCC-CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 158 AVVPSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 158 ~~~~SPdG~~la~~~~~~~~-~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
.+.++|||++++|+++.++. ...+|.+. .+++.+.+++...-..+. ......++|||||++|||......
T Consensus 72 ~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~---~~~~~~~~~SPDG~~la~~~~~~G----- 143 (695)
T 2bkl_A 72 VSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDG---TVSLGTWAVSWDGKKVAFAQKPNA----- 143 (695)
T ss_dssp ECCCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSS---CEEEEEEEECTTSSEEEEEEEETT-----
T ss_pred CCCCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCC---CEEEEEEEECCCCCEEEEEECCCC-----
Confidence 34556999999999976532 45678777 566777777653211100 012378999999999999876431
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEE
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 315 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f 315 (789)
.....|+++|+++|+..... .........++|||||+. |+|
T Consensus 144 ----------------------------------~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~----l~~ 184 (695)
T 2bkl_A 144 ----------------------------------ADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKG----FYY 184 (695)
T ss_dssp ----------------------------------CSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSE----EEE
T ss_pred ----------------------------------CceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCE----EEE
Confidence 13478999999999875111 111222368999999999 999
Q ss_pred EeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe--eecCCC---CCccCcceecCCCCEEEEEe
Q 003886 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~Lt~~---~~~~~~p~~SpDG~~la~~s 390 (789)
++..... .+.....++...||++++ .++.. +.+... ......+.|||||++|++.+
T Consensus 185 ~~~d~~~--~~~~~~~~~~~~v~~~~l-----------------~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 185 EWLPTDP--SIKVDERPGYTTIRYHTL-----------------GTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp EECCCCT--TSCGGGGGGGCEEEEEET-----------------TSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEE
T ss_pred EEecCCC--CCccccCCCCCEEEEEEC-----------------CCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEE
Confidence 9864320 000111234557999998 44432 233222 23567899999999999988
Q ss_pred cCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeC-CeEE
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-SSQV 469 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~-~~~~ 469 (789)
.... ...+||++|..++..+.++.... ....+.| +||+ +|+.++.+ ....
T Consensus 246 ~~~~-------~~~~l~~~~~~~~~~~~l~~~~~--------------------~~~~~~~-~~g~-l~~~s~~~~~~~~ 296 (695)
T 2bkl_A 246 LRGW-------SENDVYWKRPGEKDFRLLVKGVG--------------------AKYEVHA-WKDR-FYVLTDEGAPRQR 296 (695)
T ss_dssp EETT-------TEEEEEEECTTCSSCEEEEECSS--------------------CCEEEEE-ETTE-EEEEECTTCTTCE
T ss_pred eCCC-------CceEEEEEcCCCCceEEeecCCC--------------------ceEEEEe-cCCc-EEEEECCCCCCCE
Confidence 6541 34579999876554433322110 1112334 7888 88887644 4678
Q ss_pred EEEEECCCCcE---EEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 470 IISVNVSSGEL---LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 470 l~~~dl~tg~~---~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
|+.+|+++++. +.++..........++..++.++++..... -..|+++++.
T Consensus 297 l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg-~~~l~~~~~~ 350 (695)
T 2bkl_A 297 VFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDA-TSEVRVATLK 350 (695)
T ss_dssp EEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETT-EEEEEEEETT
T ss_pred EEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECC-EEEEEEEeCC
Confidence 99999988763 666655422222234444677777765543 3467777754
No 103
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.63 E-value=1.2e-15 Score=156.99 Aligned_cols=183 Identities=17% Similarity=0.252 Sum_probs=120.2
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
+.|+||++||.+.+ ...|......|+++||.|+++|+|| +|.+...... .......+|+.++++++.++ .
T Consensus 39 ~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G---~G~s~~~~~~-~~~~~~~~d~~~~i~~l~~~----~ 108 (270)
T 3rm3_A 39 GPVGVLLVHGFTGT--PHSMRPLAEAYAKAGYTVCLPRLKG---HGTHYEDMER-TTFHDWVASVEEGYGWLKQR----C 108 (270)
T ss_dssp SSEEEEEECCTTCC--GGGTHHHHHHHHHTTCEEEECCCTT---CSSCHHHHHT-CCHHHHHHHHHHHHHHHHTT----C
T ss_pred CCeEEEEECCCCCC--hhHHHHHHHHHHHCCCEEEEeCCCC---CCCCcccccc-CCHHHHHHHHHHHHHHHHhh----C
Confidence 45999999997664 5567788889999999999999998 4443321111 11122257788888887665 6
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCC----CCcchhhhhccCcc----cc--ccCCCCCh
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----IPDWCYVESYGSKG----KD--SFTESPSV 740 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~----~~~~~~~~~~~~~~----~~--~~~~~~~~ 740 (789)
++++|+|||+||++++.++.++|+ ++++|+.+|..+......... ...+. ..+.... .. .+...+ .
T Consensus 109 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~ 184 (270)
T 3rm3_A 109 QTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYL--DSIGSDLKNPDVKELAYEKTP-T 184 (270)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEE--ECCCCCCSCTTCCCCCCSEEE-H
T ss_pred CcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHH--HHhCccccccchHhhcccccC-h
Confidence 789999999999999999999999 999999999776543321100 01110 0000000 00 000000 1
Q ss_pred hhHHHHHh--cCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 741 EDLTRFHS--KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 741 ~~~~~~~~--~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.....+.. ......+.++++|+|+++|++|..+|++.+.++++.+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 233 (270)
T 3rm3_A 185 ASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISS 233 (270)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCC
T ss_pred hHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCC
Confidence 11111110 112245778899999999999999999999999999875
No 104
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.63 E-value=2.4e-15 Score=151.02 Aligned_cols=159 Identities=14% Similarity=0.150 Sum_probs=113.1
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCC----------------CCCCchhhccC
Q 003886 580 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGS----------------LGFGEEALQSL 643 (789)
Q Consensus 580 ~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs----------------~G~G~~~~~~~ 643 (789)
++.|+ ..++.|+||++||.+.+ ...|......|+++||.|+++|.+|. .|+...
T Consensus 14 ~~~p~---~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~----- 83 (232)
T 1fj2_A 14 AIVPA---ARKATAAVIFLHGLGDT--GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPD----- 83 (232)
T ss_dssp EEECC---SSCCSEEEEEECCSSSC--HHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTT-----
T ss_pred cccCC---CCCCCceEEEEecCCCc--cchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcc-----
Confidence 44565 45678999999997663 45666677778778999999854430 001100
Q ss_pred CCCCCcc----cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCc
Q 003886 644 PGKVGSQ----DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD 719 (789)
Q Consensus 644 ~~~~~~~----~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~ 719 (789)
...... ..+|+.+.++++.+ ..+|.++++|+|||+||++++.++.++|++++++|+.+|........
T Consensus 84 -~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~------- 154 (232)
T 1fj2_A 84 -SQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------- 154 (232)
T ss_dssp -CCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-------
T ss_pred -cccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc-------
Confidence 001111 23556666666655 34788999999999999999999999999999999999976432110
Q ss_pred chhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 720 WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
+ .....+.++++|+|++||++|..+|++++.++++.++
T Consensus 155 ------------------~-----------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~ 192 (232)
T 1fj2_A 155 ------------------P-----------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLK 192 (232)
T ss_dssp ------------------C-----------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred ------------------c-----------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHH
Confidence 0 0012356788999999999999999999999988774
No 105
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.63 E-value=3.2e-15 Score=163.53 Aligned_cols=137 Identities=18% Similarity=0.165 Sum_probs=94.7
Q ss_pred eeecCCCeeEEEEEEecCC---CCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHH----HCCc---EEEEEcCCCCCCCC
Q 003886 567 NLTKGAQKPFEAIFVSSSH---KKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS----SVGY---SLLIVNYRGSLGFG 636 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~---~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la----~~Gy---~V~~~d~rGs~G~G 636 (789)
.+...+|..+++..+.|.+ ..+.++.|+||++||.+.+ ...|...+..|+ ..|| .|+++|+|| +|
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G---~G 98 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMS--KVVWEYYLPRLVAADAEGNYAIDKVLLIDQVN---HG 98 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCC--GGGGGGGGGGSCCCBTTTTEEEEEEEEECCTT---SH
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCc--HHHHHHHHHHHHHhhhhcCcceeEEEEEcCCC---CC
Confidence 4567789999999998863 1123456899999997764 456666677787 4589 999999998 66
Q ss_pred chhhccCCCCCCcccHHHHHHHHHHHHHc-C---CCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccch
Q 003886 637 EEALQSLPGKVGSQDVNDVLTAIDHVIDM-G---LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL 708 (789)
Q Consensus 637 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~---~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~ 708 (789)
.+.............+.+..+.+..+++. . .++..+++|+|||+||++++.++.++|++++++|+.+|....
T Consensus 99 ~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 174 (398)
T 2y6u_A 99 DSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVIT 174 (398)
T ss_dssp HHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC
T ss_pred CCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccc
Confidence 66543211011122343433333333332 1 134455999999999999999999999999999999987653
No 106
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.63 E-value=1.5e-14 Score=148.95 Aligned_cols=202 Identities=15% Similarity=0.229 Sum_probs=125.5
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCC
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~ 647 (789)
+...+|..++....-+ ...|+||++||.+.+ ...|......|++ +|.|+++|+|| +|.+....
T Consensus 9 ~~~~~g~~l~y~~~G~------~~~p~lvl~hG~~~~--~~~w~~~~~~L~~-~~~vi~~D~rG---~G~S~~~~----- 71 (266)
T 3om8_A 9 LATSDGASLAYRLDGA------AEKPLLALSNSIGTT--LHMWDAQLPALTR-HFRVLRYDARG---HGASSVPP----- 71 (266)
T ss_dssp EECTTSCEEEEEEESC------TTSCEEEEECCTTCC--GGGGGGGHHHHHT-TCEEEEECCTT---STTSCCCC-----
T ss_pred EeccCCcEEEEEecCC------CCCCEEEEeCCCccC--HHHHHHHHHHhhc-CcEEEEEcCCC---CCCCCCCC-----
Confidence 3455788887665533 235889999996654 5567777778875 79999999998 66554211
Q ss_pred CcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhh----------hhcCCCC
Q 003886 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----------MVGTTDI 717 (789)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~----------~~~~~~~ 717 (789)
+...++++.+.+..+++. +..+++.|+|||+||.+++.++.++|++++++|+.++...... .......
T Consensus 72 ~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (266)
T 3om8_A 72 GPYTLARLGEDVLELLDA--LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDM 149 (266)
T ss_dssp SCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSS
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccH
Confidence 123466666666666555 3457899999999999999999999999999999876432100 0000000
Q ss_pred Ccch---hhhhccCccc-------cc----cCCCCCh---hhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHH
Q 003886 718 PDWC---YVESYGSKGK-------DS----FTESPSV---EDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQ 780 (789)
Q Consensus 718 ~~~~---~~~~~~~~~~-------~~----~~~~~~~---~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~ 780 (789)
.... ....+..... +. +...... .....+...+....+.++++|+|+|+|++|..+|++.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~ 229 (266)
T 3om8_A 150 SETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGEL 229 (266)
T ss_dssp HHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHH
Confidence 0000 0000000000 00 0000000 0001111222334578899999999999999999999999
Q ss_pred HHHHCCCC
Q 003886 781 VIYHIPFS 788 (789)
Q Consensus 781 l~~~l~~~ 788 (789)
+.+.++++
T Consensus 230 l~~~ip~a 237 (266)
T 3om8_A 230 IAASIAGA 237 (266)
T ss_dssp HHHHSTTC
T ss_pred HHHhCCCC
Confidence 99998764
No 107
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=8.6e-15 Score=173.84 Aligned_cols=268 Identities=12% Similarity=0.120 Sum_probs=167.8
Q ss_pred EEEeCCCCCeEEEEecCCCC-CCeEEEEe-c---CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 158 AVVPSPSGSKLLVVRNPENE-SPIQFELW-S---QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 158 ~~~~SPdG~~la~~~~~~~~-~~~~~~i~-~---~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
.+.++|||++++|+++.++. ...+|.+. . +++.+.+++...-..+. +..+..++|||||++|||...+..
T Consensus 111 ~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDG~~la~~~~~~G-- 185 (741)
T 1yr2_A 111 FGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDG---ATALDAWAASDDGRLLAYSVQDGG-- 185 (741)
T ss_dssp ECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC-------EEEEEEEECTTSSEEEEEEEETT--
T ss_pred cCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCC---CEEEEeEEECCCCCEEEEEEcCCC--
Confidence 44556999999999976532 45678777 4 56667766643211110 012378999999999999876531
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (789)
.....|+++|+++|+.... .........++|||| +.
T Consensus 186 -------------------------------------~e~~~i~v~dl~tg~~~~~--~~~~~~~~~~~wspD-~~---- 221 (741)
T 1yr2_A 186 -------------------------------------SDWRTVKFVGVADGKPLAD--ELKWVKFSGLAWLGN-DA---- 221 (741)
T ss_dssp -------------------------------------CSEEEEEEEETTTCCEEEE--EEEEEESCCCEESTT-SE----
T ss_pred -------------------------------------CceEEEEEEECCCCCCCCc--cCCCceeccEEEECC-CE----
Confidence 0236799999999987654 222223468999999 98
Q ss_pred EEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe--eecCCC---CCccCcceecCCCCEEE
Q 003886 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLV 387 (789)
Q Consensus 313 l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~Lt~~---~~~~~~p~~SpDG~~la 387 (789)
|+|++..... +.+.....++...||++++ .++.. +.+... ......+.|||||++|+
T Consensus 222 l~~~~~~~~~-~~~~~~~~~~~~~v~~~~l-----------------gt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~ 283 (741)
T 1yr2_A 222 LLYSRFAEPK-EGQAFQALNYNQTVWLHRL-----------------GTPQSADQPVFATPELPKRGHGASVSSDGRWVV 283 (741)
T ss_dssp EEEEECCCC---------CCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEE
T ss_pred EEEEEecCcc-cccccccCCCCCEEEEEEC-----------------CCCchhCEEEeccCCCCeEEEEEEECCCCCEEE
Confidence 9998754321 1111122334567999998 33331 223222 12366899999999999
Q ss_pred EEecCCCCCCCCccccceeEEeecCCC--C-CCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTN--G-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 464 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~--~-~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~ 464 (789)
+.+.+.. ....+||++|+.++ + .+.++.... .. ...++|||+.|+|.++.
T Consensus 284 ~~~~~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~~--------------------~~-~~~~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 284 ITSSEGT------DPVNTVHVARVTNGKIGPVTALIPDLK--------------------AQ-WDFVDGVGDQLWFVSGD 336 (741)
T ss_dssp EEEECTT------CSCCEEEEEEEETTEECCCEEEECSSS--------------------SC-EEEEEEETTEEEEEECT
T ss_pred EEEEccC------CCcceEEEEECCCCCCcccEEecCCCC--------------------ce-EEEEeccCCEEEEEECC
Confidence 9986541 12468999999775 3 222221110 01 11356899999998876
Q ss_pred CC-eEEEEEEECCCC--cEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 465 GS-SQVIISVNVSSG--ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 465 ~~-~~~l~~~dl~tg--~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
.+ ...|+.+|++++ +.+.+++.... ....++..++.++++...... ..|+++++.
T Consensus 337 ~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg~-~~l~~~~~~ 394 (741)
T 1yr2_A 337 GAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDAK-SQVLAFDLD 394 (741)
T ss_dssp TCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETTE-EEEEEEETT
T ss_pred CCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEECCE-EEEEEEeCC
Confidence 53 678999999884 57777765442 223445557778777765443 457777753
No 108
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.62 E-value=2.2e-15 Score=150.98 Aligned_cols=153 Identities=15% Similarity=0.138 Sum_probs=110.9
Q ss_pred CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHH--CCcEEEEEcCCCCC----------------CCCchhhccCCCCCCc
Q 003886 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSL----------------GFGEEALQSLPGKVGS 649 (789)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~--~Gy~V~~~d~rGs~----------------G~G~~~~~~~~~~~~~ 649 (789)
..++.|+||++||++.+ ...|......|++ +||.|+++|++|.+ |+|.+. ....
T Consensus 20 ~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~------~~~~ 91 (226)
T 3cn9_A 20 APNADACIIWLHGLGAD--RTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR------AIDE 91 (226)
T ss_dssp CTTCCEEEEEECCTTCC--GGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT------CBCH
T ss_pred CCCCCCEEEEEecCCCC--hHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc------cccc
Confidence 55678999999997764 5567778888988 99999999987421 222110 1112
Q ss_pred ccHHHHHHHHHHHHHc---CCCCCccEEEEEcCccHHHHHHHHH-hCCCceeEEEEeCCccchhhhhcCCCCCcchhhhh
Q 003886 650 QDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (789)
Q Consensus 650 ~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~~~-~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~ 725 (789)
..+.+..+.+..+++. ..+|.++++|+|||+||++++.++. ++|++++++|+.+|..+.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~------------- 158 (226)
T 3cn9_A 92 DQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC-------------
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh-------------
Confidence 2234444444433332 2478899999999999999999999 9999999999999976532110
Q ss_pred ccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 726 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
+. ...++++|+|+++|++|..+|++++.++++.+++
T Consensus 159 ----------------------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~ 194 (226)
T 3cn9_A 159 ----------------------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQA 194 (226)
T ss_dssp ----------------------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred ----------------------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHH
Confidence 00 1145678999999999999999999999988763
No 109
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.62 E-value=3.3e-15 Score=158.52 Aligned_cols=127 Identities=17% Similarity=0.124 Sum_probs=98.8
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~-~~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
.+...+| .+.+.+|.|.+ .++.|+||++|||++. .....|...+..|++ .||.|+++||||.+.+.
T Consensus 69 ~i~~~~~-~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~-------- 136 (323)
T 3ain_A 69 TIPGSET-NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENK-------- 136 (323)
T ss_dssp EEECSSS-EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC--------
T ss_pred EecCCCC-eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCC--------
Confidence 3344455 89999999973 4678999999998743 234467777788886 49999999999854321
Q ss_pred CCCCcccHHHHHHHHHHHHHcCC-C-CCccEEEEEcCccHHHHHHHHHhCCCce---eEEEEeCCccch
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMGL-A-NPSKVTVVGGSHGGFLTTHLIGQAPDKF---VAAAARNPLCNL 708 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~~-~-d~~rv~l~G~S~GG~~a~~~~~~~p~~~---~a~v~~~pv~~~ 708 (789)
....++|+.++++++.+... + |.+||+|+|+|+||.+++.++.+++++. +++|+.+|+.+.
T Consensus 137 ---~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~ 202 (323)
T 3ain_A 137 ---FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSF 202 (323)
T ss_dssp ---TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSC
T ss_pred ---CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccC
Confidence 12347899999999988631 2 7899999999999999999998887766 899999998764
No 110
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.62 E-value=3.2e-13 Score=143.31 Aligned_cols=242 Identities=13% Similarity=0.136 Sum_probs=150.4
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCce-eEEEecCCCccccccCCCcccc-eeecCCCCEEEEEeecCCCCCC
Q 003886 158 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVPQTVHGSVYADGWFEG-ISWNSDETLIAYVAEEPSPSKP 234 (789)
Q Consensus 158 ~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~-~~~~~~~~~~~g~v~~d~~~~~-~~wSpDg~~la~~~~~~~~~~~ 234 (789)
.++|||||++|++....+ ..++.++ ..++. .+.+...... .. +.|||||++|+ +.....
T Consensus 44 ~~~~s~dg~~l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~----------~~~~~~s~dg~~l~-~~~~~~---- 105 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFC---QTLVQIETQLEPPKVVAIQEGQSS----------MADVDITPDDQFAV-TVTGLN---- 105 (331)
T ss_dssp EEEECSSSCEEEEEESTT---CEEEEEECSSSSCEEEEEEECSSC----------CCCEEECTTSSEEE-ECCCSS----
T ss_pred eEEEcCCCCEEEEEeCCC---CeEEEEECCCCceeEEecccCCCC----------ccceEECCCCCEEE-EecCCC----
Confidence 889999999888776543 2577666 45554 4444333333 34 89999999988 432210
Q ss_pred CccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003886 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (789)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~ 314 (789)
....|++||+++++.... ++.......++|+|||+. |+
T Consensus 106 ------------------------------------~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~----l~ 143 (331)
T 3u4y_A 106 ------------------------------------HPFNMQSYSFLKNKFIST--IPIPYDAVGIAISPNGNG----LI 143 (331)
T ss_dssp ------------------------------------SSCEEEEEETTTTEEEEE--EECCTTEEEEEECTTSSC----EE
T ss_pred ------------------------------------CcccEEEEECCCCCeEEE--EECCCCccceEECCCCCE----EE
Confidence 124899999999887655 334445678999999998 77
Q ss_pred EEeecCCceeeeeeeeccCCcc-eEEEecccccchhhhhhhhcCCCCCCCe----eecCCCCCccCcceecCCCCEEEEE
Q 003886 315 FVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~Lt~~~~~~~~p~~SpDG~~la~~ 389 (789)
++.... .. |+++++. ..+.. ..+..........+|||||++|++.
T Consensus 144 ~~~~~~--------------~~~i~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 144 LIDRSS--------------ANTVRRFKID----------------ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp EEEETT--------------TTEEEEEEEC----------------TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred EEecCC--------------CceEEEEEEC----------------CCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 665321 23 6666652 11221 1122223346778999999988776
Q ss_pred ecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEE
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (789)
.... ..|++||+.++.... .+..+.. . ..+..+.|+|||++||+... +...
T Consensus 194 ~~~~----------~~v~v~d~~~~~~~~-------~~~~~~~---~-------~~~~~~~~spdg~~l~v~~~--~~~~ 244 (331)
T 3u4y_A 194 NLIG----------NSIGILETQNPENIT-------LLNAVGT---N-------NLPGTIVVSRDGSTVYVLTE--STVD 244 (331)
T ss_dssp ETTT----------TEEEEEECSSTTSCE-------EEEEEEC---S-------SCCCCEEECTTSSEEEEECS--SEEE
T ss_pred eCCC----------CeEEEEECCCCcccc-------eeeeccC---C-------CCCceEEECCCCCEEEEEEc--CCCE
Confidence 6432 469999987755410 0010100 0 12456789999998876543 4556
Q ss_pred EEEEECCCCcEEEecC---C----CCC---ceeEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 470 IISVNVSSGELLRITP---A----ESN---FSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 470 l~~~dl~tg~~~~lt~---~----~~~---~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
|+.+|+.+++++.+.. . ... .....|++||+.|+++..... .+.+.++.
T Consensus 245 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~---~v~v~d~~ 303 (331)
T 3u4y_A 245 VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISR---ELKVFTIS 303 (331)
T ss_dssp EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTT---EEEEEETT
T ss_pred EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCC---cEEEEEec
Confidence 8889999998844321 1 110 112488999998877765433 36677754
No 111
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.61 E-value=3.2e-15 Score=157.34 Aligned_cols=131 Identities=19% Similarity=0.256 Sum_probs=97.8
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhh-HHHHHHHHHCCcEEEEEcCCCCC---------CC--Cc
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSL---------GF--GE 637 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~-~~~~~~la~~Gy~V~~~d~rGs~---------G~--G~ 637 (789)
..+|.++.++++.|.+. ..+.|+||++||+++. ...| ......++++||.|+++|+|+.. |+ |.
T Consensus 34 ~~~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~ 109 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGY--TPDRPVVVVQHGVLRN--GADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTA 109 (304)
T ss_dssp -CTTCCEEEEEEECTTC--CTTSCEEEEECCTTCC--HHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCT
T ss_pred CCCCceEEEEEEeCCCC--CCCCcEEEEeCCCCCC--HHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccc
Confidence 56788999999999743 3568999999998775 3445 44567788999999999999631 22 22
Q ss_pred hhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCC-ceeEEEEeC-Cccc
Q 003886 638 EALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARN-PLCN 707 (789)
Q Consensus 638 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~-~~~a~v~~~-pv~~ 707 (789)
+.. ........++|+.++++++.++..+|.++|+|+|||+||++++.++.++|+ +++++|+.+ |..+
T Consensus 110 s~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~ 178 (304)
T 3d0k_A 110 AGN---PRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYT 178 (304)
T ss_dssp TSC---BCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCC
T ss_pred cCC---CCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcccc
Confidence 211 011122345789999999998767899999999999999999999999985 788888665 5544
No 112
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.61 E-value=1.8e-15 Score=148.91 Aligned_cols=160 Identities=12% Similarity=0.069 Sum_probs=100.2
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHC--CcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~--Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
.|+|||+||...+..+.......+++.++ ||.|+++|++| +|+ +..+.++.++.+ .+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~---~g~----------------~~~~~l~~~~~~--~~ 60 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPP---YPA----------------EAAEMLESIVMD--KA 60 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCS---SHH----------------HHHHHHHHHHHH--HT
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCC---CHH----------------HHHHHHHHHHHh--cC
Confidence 38999999965543322223345567665 49999999987 443 223344444443 35
Q ss_pred CccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhc
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 749 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (789)
.++|+|+|+|+||++|+.++.++|+...+++...+..+........ ...+ .. .+.+. ....... ...
T Consensus 61 ~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~---~~~~~--~~~~~~~--~~~ 127 (202)
T 4fle_A 61 GQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGE---NQNP---YT---GQKYV--LESRHIY--DLK 127 (202)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEE---EECT---TT---CCEEE--ECHHHHH--HHH
T ss_pred CCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhh---hccc---cc---ccccc--chHHHHH--HHH
Confidence 6899999999999999999999998877777666544322111000 0000 00 00000 0111111 122
Q ss_pred CccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 750 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 750 sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
+....+.++++|+||+||++|.+||++++.++++..
T Consensus 128 ~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~~~~ 163 (202)
T 4fle_A 128 AMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYYTPC 163 (202)
T ss_dssp TTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHTTTS
T ss_pred hhhhhhhccCceEEEEEeCCCCCCCHHHHHHHhhCC
Confidence 344567889999999999999999999999988643
No 113
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.61 E-value=1.4e-15 Score=156.11 Aligned_cols=195 Identities=13% Similarity=0.103 Sum_probs=118.2
Q ss_pred CCCeeEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCchhhHH--HHHHH-HHCCcEEEEEcCCCCCCCCchhhccC
Q 003886 571 GAQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSK--SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSL 643 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~----~~~~~P~vv~~HGg~~~~~~~~~~~--~~~~l-a~~Gy~V~~~d~rGs~G~G~~~~~~~ 643 (789)
..|..+.+.++.|++++ +.+++|+||++||++++ ...|.. ....+ ++.||.|+.+|++++.. .... .
T Consensus 16 ~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~--~- 89 (263)
T 2uz0_A 16 VLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGN--HNSWLKRTNVERLLRGTNLIVVMPNTSNGWY-TDTQ--Y- 89 (263)
T ss_dssp TTTEEEEEEEEECC---------CCBCEEEEECCTTCC--TTHHHHHSCHHHHTTTCCCEEEECCCTTSTT-SBCT--T-
T ss_pred hhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCC--HHHHHhccCHHHHHhcCCeEEEEECCCCCcc-ccCC--C-
Confidence 46788999999998752 35789999999998764 344544 34444 45899999999987432 1100 0
Q ss_pred CCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcC-CCCCcch-
Q 003886 644 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-TDIPDWC- 721 (789)
Q Consensus 644 ~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~-~~~~~~~- 721 (789)
...+.....+|+.+.++.+..+..+|.++++|+|||+||++++.++. +|++|+++|+.+|..++..+... .......
T Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 2uz0_A 90 GFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPESQNLGSPAY 168 (263)
T ss_dssp SCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGGTTCSCHHH
T ss_pred cccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccccccccccchh
Confidence 00000111234444444443323468899999999999999999999 89999999999998865431100 0000000
Q ss_pred hhhhccCccccccCCCCChhhHHHHHhcCccccCCCCC--CCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 722 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
+...++. .. ...+...+|...+.++. +|+|++||++|..++ ++.+++++|+
T Consensus 169 ~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~ 221 (263)
T 2uz0_A 169 WRGVFGE---------IR---DWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLK 221 (263)
T ss_dssp HHHHHCC---------CS---CTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHH
T ss_pred HHHHcCC---------hh---hhccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHH
Confidence 0001111 00 00122344554555554 799999999999884 4677777765
No 114
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.61 E-value=5.1e-14 Score=165.64 Aligned_cols=265 Identities=9% Similarity=0.025 Sum_probs=170.1
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC----
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN---- 176 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~---- 176 (789)
...+||||+++||+.+.. +.....|+++++.+ ++..+.+... .....++|| ||+.|+|++..+.
T Consensus 133 ~~~~SpDg~~lAy~~~~~----G~~~~~i~v~dl~t--g~~~~~~~~~-----~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLA----GSDWREIHLMDVES--KQPLETPLKD-----VKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp EEEECTTSSEEEEEEECS----SCCEEEEEEEETTT--CSEEEEEEEE-----EESCCCEEE-TTTEEEEEESSCCC---
T ss_pred EEEECCCCCEEEEEEecC----CCceEEEEEEECCC--CCCCccccCC-----ceeccEEEe-CCCEEEEEEecCccccc
Confidence 346789999999987642 34457899988743 3333322111 113578999 9999999987642
Q ss_pred -----CCCeEEEEec-CCc--eeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCc
Q 003886 177 -----ESPIQFELWS-QSQ--LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDK 248 (789)
Q Consensus 177 -----~~~~~~~i~~-~~~--~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (789)
...+++.... +++ ...+....... +.++.++.|||||++|++.+....
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~------~~~~~~~~~SpDg~~l~~~~~~~~------------------ 256 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ------HHRYVGATVTEDDRFLLISAANST------------------ 256 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGG------CCSEEEEEECTTSCEEEEEEESSS------------------
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCC------CeEEEEEEEcCCCCEEEEEEccCC------------------
Confidence 2345655542 222 23333322201 112357899999999999765431
Q ss_pred CCCCCCCcceeeCCcccccCCccCceEEEEEccCC--ceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeee
Q 003886 249 DCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG--EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLG 326 (789)
Q Consensus 249 ~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g--~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g 326 (789)
...+||++|++++ +.+.+. ........+ |++||++ |+|.++...
T Consensus 257 ----------------------~~~~i~~~d~~~~~~~~~~l~--~~~~~~~~~-~~~~g~~----l~~~t~~~~----- 302 (693)
T 3iuj_A 257 ----------------------SGNRLYVKDLSQENAPLLTVQ--GDLDADVSL-VDNKGST----LYLLTNRDA----- 302 (693)
T ss_dssp ----------------------SCCEEEEEETTSTTCCCEEEE--CSSSSCEEE-EEEETTE----EEEEECTTC-----
T ss_pred ----------------------CCcEEEEEECCCCCCceEEEe--CCCCceEEE-EeccCCE----EEEEECCCC-----
Confidence 2258999999876 566663 332222333 8999999 999986543
Q ss_pred eeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe---eecCCCCCccCcceecCCCCEEEEEecCCCCCCCCcccc
Q 003886 327 IKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV---VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSAT 403 (789)
Q Consensus 327 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~ 403 (789)
....|+.+|+ +++.. +.|+.+..... .|||+|++|++...++ +.
T Consensus 303 ------~~~~l~~~d~-----------------~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~--------g~ 349 (693)
T 3iuj_A 303 ------PNRRLVTVDA-----------------ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD--------AT 349 (693)
T ss_dssp ------TTCEEEEEET-----------------TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET--------TE
T ss_pred ------CCCEEEEEeC-----------------CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEEC--------Ce
Confidence 2347999998 44433 56666654443 9999999999988765 35
Q ss_pred ceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe-CCeEEEEEEECCCCcEEE
Q 003886 404 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLR 482 (789)
Q Consensus 404 ~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~-~~~~~l~~~dl~tg~~~~ 482 (789)
.+|+++|+.++..+.+..... ..+..+.+++|++.|+|.... .....||.+|+.+++.+.
T Consensus 350 ~~l~~~d~~g~~~~~l~~p~~-------------------~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 350 ARVEQFDYEGKRVREVALPGL-------------------GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL 410 (693)
T ss_dssp EEEEEECTTSCEEEEECCSSS-------------------SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE
T ss_pred eEEEEEECCCCeeEEeecCCC-------------------ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE
Confidence 689999987644322211100 012244577899988887654 345689999999999888
Q ss_pred ecCCC
Q 003886 483 ITPAE 487 (789)
Q Consensus 483 lt~~~ 487 (789)
+....
T Consensus 411 l~~~~ 415 (693)
T 3iuj_A 411 YRASA 415 (693)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 76543
No 115
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.61 E-value=1.4e-14 Score=149.22 Aligned_cols=119 Identities=18% Similarity=0.239 Sum_probs=83.3
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCC
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~ 647 (789)
+...||..++...+- ..|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+... .
T Consensus 3 ~~~~~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~ 64 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWG--------SGKPVLFSHGWLLD--ADMWEYQMEYLSSRGYRTIAFDRRG---FGRSDQP-----W 64 (271)
T ss_dssp EECTTSCEEEEEEES--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTT---STTSCCC-----S
T ss_pred EEcCCCCEEEEEccC--------CCCeEEEECCCCCc--HHHHHHHHHHHHhCCceEEEecCCC---CccCCCC-----C
Confidence 455678887654432 23568899997664 5678778889999999999999998 5554321 1
Q ss_pred CcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHh-CCCceeEEEEeCCcc
Q 003886 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLC 706 (789)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~-~p~~~~a~v~~~pv~ 706 (789)
...+++++.+.+..+++. ++.+++.|+||||||++++.++++ .|++++++|+.++..
T Consensus 65 ~~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~ 122 (271)
T 3ia2_A 65 TGNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVT 122 (271)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCC
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCC
Confidence 123345555555555444 355789999999999866665554 589999999988653
No 116
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.61 E-value=8.9e-15 Score=155.38 Aligned_cols=130 Identities=20% Similarity=0.207 Sum_probs=100.3
Q ss_pred eeecCCCe-eEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccC
Q 003886 567 NLTKGAQK-PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSL 643 (789)
Q Consensus 567 ~~~~~~g~-~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~ 643 (789)
.+...+|. .+.++++.|++ ..++.|+||++|||++.. ....|...+..|++ .||.|+++||||.+...
T Consensus 55 ~i~~~~g~~~l~~~~~~P~~--~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~------- 125 (323)
T 1lzl_A 55 SAPGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT------- 125 (323)
T ss_dssp EECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC-------
T ss_pred EecCCCCCceeEEEEEecCC--CCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCC-------
Confidence 44556776 79999999963 346789999999987432 34456667777876 59999999999854321
Q ss_pred CCCCCcccHHHHHHHHHHHHHc---CCCCCccEEEEEcCccHHHHHHHHHhCCC----ceeEEEEeCCccchh
Q 003886 644 PGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLA 709 (789)
Q Consensus 644 ~~~~~~~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~~~~~p~----~~~a~v~~~pv~~~~ 709 (789)
.....+|+.++++++.+. ..+|+++|+|+|||+||++++.++.++++ .++++|+.+|+.+..
T Consensus 126 ----~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 194 (323)
T 1lzl_A 126 ----FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDR 194 (323)
T ss_dssp ----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTT
T ss_pred ----CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCC
Confidence 123478999999999874 23678899999999999999999987665 499999999988753
No 117
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.61 E-value=1.5e-14 Score=149.73 Aligned_cols=102 Identities=22% Similarity=0.325 Sum_probs=78.0
Q ss_pred cEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCcc
Q 003886 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (789)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (789)
|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+.... ....++++.+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~~-----~~~~~~~~a~dl~~~l~~--l~~~~ 91 (277)
T 1brt_A 24 QPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRG---FGQSSQPT-----TGYDYDTFAADLNTVLET--LDLQD 91 (277)
T ss_dssp SEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCCS-----SCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CeEEEECCCCCc--HHHHHHHHHHHhhCCCEEEEeCCCC---CCCCCCCC-----CCccHHHHHHHHHHHHHH--hCCCc
Confidence 448999997764 5678888889999999999999998 56554211 123455555555555544 34578
Q ss_pred EEEEEcCccHHHHHHHHHhCCC-ceeEEEEeCCcc
Q 003886 673 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLC 706 (789)
Q Consensus 673 v~l~G~S~GG~~a~~~~~~~p~-~~~a~v~~~pv~ 706 (789)
+.|+|||+||.+++.++.++|+ +++++|+.++..
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~ 126 (277)
T 1brt_A 92 AVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLE 126 (277)
T ss_dssp EEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCC
T ss_pred eEEEEECccHHHHHHHHHHcCcceEEEEEEecCcC
Confidence 9999999999999999999998 999999998743
No 118
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.61 E-value=1.1e-14 Score=153.61 Aligned_cols=192 Identities=16% Similarity=0.172 Sum_probs=122.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++..... +.|+||++||++.+ ...|......|++ ||.|+++|+|| +|.+.. ......
T Consensus 56 ~~~~~~~~~~g--------~~p~vv~lhG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G---~G~S~~-----~~~~~~ 116 (314)
T 3kxp_A 56 GRITLNVREKG--------SGPLMLFFHGITSN--SAVFEPLMIRLSD-RFTTIAVDQRG---HGLSDK-----PETGYE 116 (314)
T ss_dssp SSCEEEEEEEC--------CSSEEEEECCTTCC--GGGGHHHHHTTTT-TSEEEEECCTT---STTSCC-----CSSCCS
T ss_pred CCEEEEEEecC--------CCCEEEEECCCCCC--HHHHHHHHHHHHc-CCeEEEEeCCC---cCCCCC-----CCCCCC
Confidence 56666654432 26899999997764 4567777777776 69999999998 444331 122345
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhh--------cCCC--CCcch
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV--------GTTD--IPDWC 721 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~--------~~~~--~~~~~ 721 (789)
++++.+.+..+++. ++.++++|+|||+||++++.++.++|++++++|+.+|........ .... ...+.
T Consensus 117 ~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (314)
T 3kxp_A 117 ANDYADDIAGLIRT--LARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIK 194 (314)
T ss_dssp HHHHHHHHHHHHHH--HTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHH
T ss_pred HHHHHHHHHHHHHH--hCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHH
Confidence 67777777777665 345799999999999999999999999999999998865331110 0000 00000
Q ss_pred hhhhccCccccccCCCCChhhHHHHH---------------------------hcCccccCCCCCCCEEEEEeCCCCCCC
Q 003886 722 YVESYGSKGKDSFTESPSVEDLTRFH---------------------------SKSPISHISKVKTPTIFLLGAQDLRVP 774 (789)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~sp~~~~~~i~~P~Lii~G~~D~~vp 774 (789)
....+. ...+... ..+....+. ..+....+.++++|+|+++|++|..+|
T Consensus 195 ~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~ 270 (314)
T 3kxp_A 195 AVEAYL---AGRYPNI-PADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVS 270 (314)
T ss_dssp HHHHHH---HHHSTTS-CHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSC
T ss_pred HHHHHH---HhhcccC-chHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCC
Confidence 000000 0000000 011111111 113344467899999999999999999
Q ss_pred hHHHHHHHHHCCCC
Q 003886 775 VSNGLQVIYHIPFS 788 (789)
Q Consensus 775 ~~~~~~l~~~l~~~ 788 (789)
++.+.++++.+++.
T Consensus 271 ~~~~~~~~~~~~~~ 284 (314)
T 3kxp_A 271 AAALAKTSRLRPDL 284 (314)
T ss_dssp HHHHHHHHHHCTTS
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999988653
No 119
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.61 E-value=3.5e-15 Score=157.57 Aligned_cols=126 Identities=20% Similarity=0.248 Sum_probs=98.0
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCchhhHHHHHHHHHC-CcEEEEEcCCCCCCCCchhhccCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~-~~~~~~~~~~~~la~~-Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
.+...+| .+.+.++.|.+ ..+.|+||++||+++. .....|......|+++ ||.|+++||||.+++.
T Consensus 52 ~i~~~~g-~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~-------- 119 (311)
T 2c7b_A 52 HIPVSGG-SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK-------- 119 (311)
T ss_dssp EEEETTE-EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSC--------
T ss_pred EecCCCC-cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCC--------
Confidence 3445556 89999999973 4467999999998732 1344677777888875 9999999999854421
Q ss_pred CCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhCCC----ceeEEEEeCCccc
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCN 707 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~p~----~~~a~v~~~pv~~ 707 (789)
.....+|+.++++++.+.. .+|+++|+|+|||+||++++.++.++|+ +++++|+.+|+.+
T Consensus 120 ---~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 186 (311)
T 2c7b_A 120 ---FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVN 186 (311)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred ---CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccC
Confidence 1234789999999998752 3677899999999999999999987665 5999999999887
No 120
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.60 E-value=6.7e-16 Score=160.63 Aligned_cols=197 Identities=12% Similarity=0.094 Sum_probs=121.9
Q ss_pred ecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH---HHHHHHHCCcEEEEEcCC--CCC---------C
Q 003886 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYR--GSL---------G 634 (789)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~Gy~V~~~d~r--Gs~---------G 634 (789)
....|.++...++.|++++ .+++|+||++||+++.. ..|.. ....+++.||.|+++|.+ |.. |
T Consensus 29 s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G 105 (283)
T 4b6g_A 29 AQTLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTE--QNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLG 105 (283)
T ss_dssp ETTTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCS--HHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSB
T ss_pred chhhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEEecccccccccccccccccc
Confidence 3446788999999998654 67899999999987653 34422 345677889999999964 432 2
Q ss_pred CCchhhccCCC-CC-Cccc-HHHHH-HHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhh
Q 003886 635 FGEEALQSLPG-KV-GSQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (789)
Q Consensus 635 ~G~~~~~~~~~-~~-~~~~-~~D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~ 710 (789)
+|.++...... .+ +... ...+. +.+.++.+. +-+.+|++|+|||+||++++.++.++|++|+++++.+|+++...
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~ 184 (283)
T 4b6g_A 106 QSAGFYLNATEQPWAANYQMYDYILNELPRLIEKH-FPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSL 184 (283)
T ss_dssp TTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHH-SCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGG
T ss_pred CCCcccccCccCcccchhhHHHHHHHHHHHHHHHh-CCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCcccccc
Confidence 33332211111 11 1112 22222 234444333 22468999999999999999999999999999999999886532
Q ss_pred hhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCC--CCCEEEEEeCCCCCCChH-HHHHHHHHCC
Q 003886 711 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPVS-NGLQVIYHIP 786 (789)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~Lii~G~~D~~vp~~-~~~~l~~~l~ 786 (789)
.... ...+...++. ....+...+|...+.++ .+|+||+||++|.+++.. ++.+++++|+
T Consensus 185 ~~~~----~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~ 246 (283)
T 4b6g_A 185 VPWG----EKAFTAYLGK-------------DREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCR 246 (283)
T ss_dssp SHHH----HHHHHHHHCS-------------CGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHH
T ss_pred Ccch----hhhHHhhcCC-------------chHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHH
Confidence 1000 0000111111 00122334444444333 459999999999999872 2677777664
No 121
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.60 E-value=2e-15 Score=150.89 Aligned_cols=165 Identities=15% Similarity=0.101 Sum_probs=115.1
Q ss_pred CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccC-CCCC----
Q 003886 573 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL-PGKV---- 647 (789)
Q Consensus 573 g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~-~~~~---- 647 (789)
+.+++..++.|. ..+.|+||++||++.+ ...|......|++ ||.|+++|.++..+.|..+.... .+..
T Consensus 15 ~~~l~~~~~~~~----~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~ 87 (223)
T 3b5e_A 15 DLAFPYRLLGAG----KESRECLFLLHGSGVD--ETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKS 87 (223)
T ss_dssp SSSSCEEEESTT----SSCCCEEEEECCTTBC--TTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred CCCceEEEeCCC----CCCCCEEEEEecCCCC--HHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHH
Confidence 344555555553 2344999999997664 4466666777765 99999999876322222221100 0000
Q ss_pred CcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhcc
Q 003886 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (789)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~ 727 (789)
.....+++.+.++++.++..+|.++++|+|||+||.+++.++.++|++++++|+.+|.....
T Consensus 88 ~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------------ 149 (223)
T 3b5e_A 88 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------ 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc------------------
Confidence 01124566777777777644788999999999999999999999999999999999865310
Q ss_pred CccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 728 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
. + .....+++|+|++||++|..||++++. +++.++
T Consensus 150 ~---------~--------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~ 184 (223)
T 3b5e_A 150 H---------V--------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLS 184 (223)
T ss_dssp S---------C--------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHH
T ss_pred c---------c--------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHH
Confidence 0 0 122346789999999999999999999 888775
No 122
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.60 E-value=8e-15 Score=150.96 Aligned_cols=199 Identities=17% Similarity=0.245 Sum_probs=123.1
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++...+-|. +.+.|.||++||.+.+ ...|......|++ +|.|+++|+|| +|.+.... ....
T Consensus 10 ~g~~l~y~~~g~~----~~~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~D~~G---~G~S~~~~-----~~~~ 74 (266)
T 2xua_A 10 NGTELHYRIDGER----HGNAPWIVLSNSLGTD--LSMWAPQVAALSK-HFRVLRYDTRG---HGHSEAPK-----GPYT 74 (266)
T ss_dssp SSSEEEEEEESCS----SSCCCEEEEECCTTCC--GGGGGGGHHHHHT-TSEEEEECCTT---STTSCCCS-----SCCC
T ss_pred CCEEEEEEEcCCc----cCCCCeEEEecCccCC--HHHHHHHHHHHhc-CeEEEEecCCC---CCCCCCCC-----CCCC
Confidence 6777876665432 1125889999996654 5567777777865 59999999998 56554211 1234
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchh---hhhc------CCCCCcch-
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---LMVG------TTDIPDWC- 721 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~---~~~~------~~~~~~~~- 721 (789)
++++.+.+..+++. +..+++.|+|||+||.+++.+|.++|++++++|+.++..... .+.. ........
T Consensus 75 ~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (266)
T 2xua_A 75 IEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALAD 152 (266)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHH
Confidence 56666666666554 345689999999999999999999999999999998754210 0000 00000000
Q ss_pred -h-hhhccCcc-----------ccccCCCCChhh----HHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 003886 722 -Y-VESYGSKG-----------KDSFTESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYH 784 (789)
Q Consensus 722 -~-~~~~~~~~-----------~~~~~~~~~~~~----~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~ 784 (789)
. ...+.... .+.+... .... ...+...+....+.++++|+|+++|++|..+|++.+.++.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~ 231 (266)
T 2xua_A 153 AVLPRWFTADYMEREPVVLAMIRDVFVHT-DKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQA 231 (266)
T ss_dssp HHHHHHSCHHHHHHCHHHHHHHHHHHHTS-CHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHHHHHcCcccccCCHHHHHHHHHHHhhC-CHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHh
Confidence 0 00000000 0000000 0000 011122334445778999999999999999999999999998
Q ss_pred CCCC
Q 003886 785 IPFS 788 (789)
Q Consensus 785 l~~~ 788 (789)
+++.
T Consensus 232 ~~~~ 235 (266)
T 2xua_A 232 IAGA 235 (266)
T ss_dssp STTC
T ss_pred CCCC
Confidence 8753
No 123
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.60 E-value=6e-15 Score=152.15 Aligned_cols=187 Identities=16% Similarity=0.244 Sum_probs=118.7
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
...|+||++||.+.+ ...|......|++ +|.|+++|+|| +|.+... ......++++.+.+..+++. .+
T Consensus 13 ~~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~----~~~~~~~~~~a~dl~~~l~~--l~ 80 (268)
T 3v48_A 13 ADAPVVVLISGLGGS--GSYWLPQLAVLEQ-EYQVVCYDQRG---TGNNPDT----LAEDYSIAQMAAELHQALVA--AG 80 (268)
T ss_dssp TTCCEEEEECCTTCC--GGGGHHHHHHHHT-TSEEEECCCTT---BTTBCCC----CCTTCCHHHHHHHHHHHHHH--TT
T ss_pred CCCCEEEEeCCCCcc--HHHHHHHHHHHhh-cCeEEEECCCC---CCCCCCC----ccccCCHHHHHHHHHHHHHH--cC
Confidence 346889999997664 5678777777754 69999999998 5655321 11234577777777777765 34
Q ss_pred CccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhc-----------CCCCCcchhh--------hhccCc-
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TTDIPDWCYV--------ESYGSK- 729 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~-----------~~~~~~~~~~--------~~~~~~- 729 (789)
.+++.|+|||+||.+++.++.++|++++++|+.++......... ......+... ..+...
T Consensus 81 ~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (268)
T 3v48_A 81 IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARA 160 (268)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTH
T ss_pred CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhccc
Confidence 57899999999999999999999999999999987543210000 0000000000 000000
Q ss_pred ------cccccCCCCChh----hHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCCC
Q 003886 730 ------GKDSFTESPSVE----DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPFS 788 (789)
Q Consensus 730 ------~~~~~~~~~~~~----~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~~ 788 (789)
............ ....+...+....+.++++|+|+|+|++|..+|++.+.++.+.++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~~ 229 (268)
T 3v48_A 161 PRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDS 229 (268)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSSE
T ss_pred ccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCcC
Confidence 000000000001 11112233334457889999999999999999999999999988753
No 124
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.60 E-value=1.1e-14 Score=148.50 Aligned_cols=196 Identities=17% Similarity=0.206 Sum_probs=117.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....-+ ..|.||++||.+++ ....|......|+++||.|+++|+|| +|.+... ...+....
T Consensus 10 ~g~~l~~~~~g~-------~~~~vvllHG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~--~~~~~~~~ 76 (254)
T 2ocg_A 10 NGVQLHYQQTGE-------GDHAVLLLPGMLGS-GETDFGPQLKNLNKKLFTVVAWDPRG---YGHSRPP--DRDFPADF 76 (254)
T ss_dssp TTEEEEEEEEEC-------CSEEEEEECCTTCC-HHHHCHHHHHHSCTTTEEEEEECCTT---STTCCSS--CCCCCTTH
T ss_pred CCEEEEEEEecC-------CCCeEEEECCCCCC-CccchHHHHHHHhhCCCeEEEECCCC---CCCCCCC--CCCCChHH
Confidence 566666443321 23679999996653 13457777788888999999999998 5554321 11111111
Q ss_pred H-HHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhh-----hhcCCCCCcchh--h
Q 003886 652 V-NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----MVGTTDIPDWCY--V 723 (789)
Q Consensus 652 ~-~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~-----~~~~~~~~~~~~--~ 723 (789)
+ +++.++++++.+. +.+++.|+|||+||.+++.+|.++|++++++|+.++...... +........|.. .
T Consensus 77 ~~~~~~~~~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T 2ocg_A 77 FERDAKDAVDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTR 153 (254)
T ss_dssp HHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhH
Confidence 2 2333444444333 457899999999999999999999999999999987532110 000111111100 0
Q ss_pred h----hccCccccccCCCCChhh-HHHHHhc-------CccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCCC
Q 003886 724 E----SYGSKGKDSFTESPSVED-LTRFHSK-------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPFS 788 (789)
Q Consensus 724 ~----~~~~~~~~~~~~~~~~~~-~~~~~~~-------sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~~ 788 (789)
. .++...... .+.. ...+... .....+.++++|+|+++|++|..+|++.+..+++.+++.
T Consensus 154 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 225 (254)
T 2ocg_A 154 KPLEALYGYDYFAR-----TCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGS 225 (254)
T ss_dssp HHHHHHHCHHHHHH-----HHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTC
T ss_pred HHHHHHhcchhhHH-----HHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCCC
Confidence 0 000000000 0000 0011110 112346789999999999999999999999999988753
No 125
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.59 E-value=7.3e-15 Score=155.96 Aligned_cols=183 Identities=18% Similarity=0.216 Sum_probs=119.8
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCCCc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~ 649 (789)
+|.++ +.|.+ .....|+||++|||++.. ....|......|+. .||.|+++|||++++.. ..
T Consensus 66 ~g~~~----~~p~~--~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----------~~ 128 (322)
T 3k6k_A 66 GGVPC----IRQAT--DGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENP-----------FP 128 (322)
T ss_dssp TTEEE----EEEEC--TTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSC-----------TT
T ss_pred CCEeE----EecCC--CCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCC-----------Cc
Confidence 56555 45652 233445599999987533 33456666777775 49999999999865421 23
Q ss_pred ccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCc----eeEEEEeCCccchhhhhcCCCCCcchhhhh
Q 003886 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (789)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~----~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~ 725 (789)
..++|+.++++|+.++ .+|.++|+|+|+|+||.+++.++.+++++ ++++|+.+|++++.... ..+...
T Consensus 129 ~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~-------~~~~~~ 200 (322)
T 3k6k_A 129 AAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSR-------WSNSNL 200 (322)
T ss_dssp HHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCS-------HHHHHT
T ss_pred hHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCc-------cchhhc
Confidence 3578999999999998 47899999999999999999999887665 99999999998753210 000000
Q ss_pred ccCccccccCCCCChhhH----HHH--------HhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 726 YGSKGKDSFTESPSVEDL----TRF--------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~----~~~--------~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
... ... ...... ..| ...+|+....+..+|+||+||++|.. ..++.+++++|+.
T Consensus 201 ~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~--~~~~~~~~~~l~~ 266 (322)
T 3k6k_A 201 ADR----DFL--AEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL--LSDSTTLAERAGA 266 (322)
T ss_dssp GGG----CSS--SCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT--HHHHHHHHHHHHH
T ss_pred cCC----CCc--CCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc--HHHHHHHHHHHHH
Confidence 000 000 000000 111 12344444334447999999999987 4688888887753
No 126
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.59 E-value=5.8e-15 Score=151.23 Aligned_cols=188 Identities=13% Similarity=0.084 Sum_probs=117.1
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
..|+||++||.+.+ ...|......|++ ||.|+++|+|| +|.+...... .....+++++.+.+..+++. ++.
T Consensus 19 ~~p~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~D~~G---~G~S~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTD--QSAWNRILPFFLR-DYRVVLYDLVC---AGSVNPDFFD-FRRYTTLDPYVDDLLHILDA--LGI 89 (269)
T ss_dssp CSSEEEEECCTTCC--GGGGTTTGGGGTT-TCEEEEECCTT---STTSCGGGCC-TTTCSSSHHHHHHHHHHHHH--TTC
T ss_pred CCCEEEEEeCCCCc--HHHHHHHHHHHhC-CcEEEEEcCCC---CCCCCCCCCC-ccccCcHHHHHHHHHHHHHh--cCC
Confidence 45899999997764 4566666677877 99999999998 5554321111 11122455666666666655 456
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCC-CCc--ch-hhhhccC-------ccccccCCCCC
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD-IPD--WC-YVESYGS-------KGKDSFTESPS 739 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~-~~~--~~-~~~~~~~-------~~~~~~~~~~~ 739 (789)
+++.|+|||+||++++.++.++|++++++|+.+|............ ... .. ....... ...........
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADV 169 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSC
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCC
Confidence 7999999999999999999999999999999998643211000000 000 00 0000000 00000000000
Q ss_pred hh-------------------hHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 740 VE-------------------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 740 ~~-------------------~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.+ ....+...+....+.++++|+|+++|++|..+|++.+..+++.+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 236 (269)
T 4dnp_A 170 PAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGG 236 (269)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSS
T ss_pred hhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCC
Confidence 00 1111223344556788999999999999999999999999998875
No 127
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.59 E-value=1.4e-14 Score=149.79 Aligned_cols=119 Identities=20% Similarity=0.241 Sum_probs=86.3
Q ss_pred ecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
...+|..++...+-|. ..|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+.... .
T Consensus 5 ~~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~vi~~D~~G---~G~S~~~~-----~ 68 (276)
T 1zoi_A 5 TTKDGVQIFYKDWGPR------DAPVIHFHHGWPLS--ADDWDAQLLFFLAHGYRVVAHDRRG---HGRSSQVW-----D 68 (276)
T ss_dssp ECTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCCS-----S
T ss_pred ECCCCcEEEEEecCCC------CCCeEEEECCCCcc--hhHHHHHHHHHHhCCCEEEEecCCC---CCCCCCCC-----C
Confidence 4457777776555432 24789999997664 5678888889999999999999998 55553211 1
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPL 705 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-p~~~~a~v~~~pv 705 (789)
...++++.+.+..+++. ++.+++.|+|||+||.+++.++.++ |++++++|+.++.
T Consensus 69 ~~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 124 (276)
T 1zoi_A 69 GHDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAV 124 (276)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCC
T ss_pred CCCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCC
Confidence 23455555545444443 3456899999999999999977776 9999999999864
No 128
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.59 E-value=5.4e-15 Score=146.81 Aligned_cols=153 Identities=14% Similarity=0.105 Sum_probs=109.9
Q ss_pred CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHH--CCcEEEEEcCCCC-----C-----------CCCchhhccCCCCCCc
Q 003886 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGS-----L-----------GFGEEALQSLPGKVGS 649 (789)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~--~Gy~V~~~d~rGs-----~-----------G~G~~~~~~~~~~~~~ 649 (789)
..++.|+||++||.+.+ ...|......|++ +||.|+++|++|. . |+|.+. ....
T Consensus 10 ~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~------~~~~ 81 (218)
T 1auo_A 10 AKPADACVIWLHGLGAD--RYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR------SISL 81 (218)
T ss_dssp SSCCSEEEEEECCTTCC--TTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC------EECH
T ss_pred CCCCCcEEEEEecCCCC--hhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc------ccch
Confidence 45678999999997764 4567777888988 9999999997641 1 111110 0111
Q ss_pred cc----HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHH-hCCCceeEEEEeCCccchhhhhcCCCCCcchhhh
Q 003886 650 QD----VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 724 (789)
Q Consensus 650 ~~----~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~-~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~ 724 (789)
.. .+++.+.++++.+ ..++.++++++|||+||++++.++. ++|++++++|+.+|..... ..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~------~~~------ 148 (218)
T 1auo_A 82 EELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF------GDE------ 148 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC------CTT------
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc------hhh------
Confidence 12 3444445555544 2478889999999999999999999 9999999999999976430 000
Q ss_pred hccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 725 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
. . ....++++|+|++||++|..||++++.++++.+++
T Consensus 149 ---~----------~-------------~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~ 185 (218)
T 1auo_A 149 ---L----------E-------------LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKS 185 (218)
T ss_dssp ---C----------C-------------CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHT
T ss_pred ---h----------h-------------hhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHh
Confidence 0 0 01135678999999999999999999999998864
No 129
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.59 E-value=2.1e-14 Score=150.45 Aligned_cols=121 Identities=15% Similarity=0.148 Sum_probs=87.2
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHH-HHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~-~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~ 649 (789)
.+|..++...+-+. ..|.||++||.+.+ ...|.... ..|+++||.|+++|+|| +|.+.... +. ...
T Consensus 8 ~~g~~l~y~~~G~~------~~~~vvllHG~~~~--~~~w~~~~~~~L~~~G~~vi~~D~rG---~G~S~~~~-~~-~~~ 74 (298)
T 1q0r_A 8 SGDVELWSDDFGDP------ADPALLLVMGGNLS--ALGWPDEFARRLADGGLHVIRYDHRD---TGRSTTRD-FA-AHP 74 (298)
T ss_dssp ETTEEEEEEEESCT------TSCEEEEECCTTCC--GGGSCHHHHHHHHTTTCEEEEECCTT---STTSCCCC-TT-TSC
T ss_pred cCCeEEEEEeccCC------CCCeEEEEcCCCCC--ccchHHHHHHHHHhCCCEEEeeCCCC---CCCCCCCC-CC-cCC
Confidence 36777776555332 34789999997764 45666544 78999999999999998 55543200 01 112
Q ss_pred ccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
..++++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.++..
T Consensus 75 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 75 YGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGG 129 (298)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccC
Confidence 3456666666655554 456789999999999999999999999999999988754
No 130
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.59 E-value=1.9e-14 Score=149.38 Aligned_cols=117 Identities=20% Similarity=0.268 Sum_probs=83.1
Q ss_pred ecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
.+.+|..++.... + ..|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+... ..
T Consensus 12 ~~~~g~~l~y~~~-------G-~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~ 73 (281)
T 3fob_A 12 ENQAPIEIYYEDH-------G-TGKPVVLIHGWPLS--GRSWEYQVPALVEAGYRVITYDRRG---FGKSSQP-----WE 73 (281)
T ss_dssp ETTEEEEEEEEEE-------S-SSEEEEEECCTTCC--GGGGTTTHHHHHHTTEEEEEECCTT---STTSCCC-----SS
T ss_pred CCCCceEEEEEEC-------C-CCCeEEEECCCCCc--HHHHHHHHHHHHhCCCEEEEeCCCC---CCCCCCC-----cc
Confidence 3456666653322 1 23668899998764 5567777888999999999999998 5655321 12
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHh-CCCceeEEEEeCCc
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPL 705 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~-~p~~~~a~v~~~pv 705 (789)
...++++.+.+..+++. ++.+++.|+|||+||.+++.+++. +|++++++|+.++.
T Consensus 74 ~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~ 129 (281)
T 3fob_A 74 GYEYDTFTSDLHQLLEQ--LELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAV 129 (281)
T ss_dssp CCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred ccCHHHHHHHHHHHHHH--cCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCC
Confidence 23456666666666665 456789999999999877766554 58999999998865
No 131
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.59 E-value=7e-15 Score=151.26 Aligned_cols=186 Identities=15% Similarity=0.203 Sum_probs=118.2
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
+.|+||++||++.+ ...|......|++ ||.|+++|+|| +|.+... .......++++.+.+..+++. ++.
T Consensus 22 ~~~~vv~~HG~~~~--~~~~~~~~~~L~~-~~~vi~~d~~G---~G~s~~~---~~~~~~~~~~~~~~~~~~~~~--l~~ 90 (278)
T 3oos_A 22 EGPPLCVTHLYSEY--NDNGNTFANPFTD-HYSVYLVNLKG---CGNSDSA---KNDSEYSMTETIKDLEAIREA--LYI 90 (278)
T ss_dssp SSSEEEECCSSEEC--CTTCCTTTGGGGG-TSEEEEECCTT---STTSCCC---SSGGGGSHHHHHHHHHHHHHH--TTC
T ss_pred CCCeEEEEcCCCcc--hHHHHHHHHHhhc-CceEEEEcCCC---CCCCCCC---CCcccCcHHHHHHHHHHHHHH--hCC
Confidence 35789999997764 3345555667777 99999999998 4544321 112234567777777777776 456
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCC-----Ccchh----hhhccC-------------
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-----PDWCY----VESYGS------------- 728 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~-----~~~~~----~~~~~~------------- 728 (789)
+++.|+|||+||.+++.++.++|++++++|+.+|............. ..... ...+..
T Consensus 91 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (278)
T 3oos_A 91 NKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSR 170 (278)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHH
T ss_pred CeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHHH
Confidence 79999999999999999999999999999999998762111100000 00000 000000
Q ss_pred ----------ccccccCCCC-----ChhhHHHHH-----hcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 729 ----------KGKDSFTESP-----SVEDLTRFH-----SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 729 ----------~~~~~~~~~~-----~~~~~~~~~-----~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.....+...+ .......+. ..+....+.++++|+|+++|++|..+|++.+.++++.+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 249 (278)
T 3oos_A 171 EWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPN 249 (278)
T ss_dssp HHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTT
T ss_pred HHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCCC
Confidence 0000000000 001112222 2233345788999999999999999999999999998864
No 132
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.59 E-value=2.1e-14 Score=147.13 Aligned_cols=108 Identities=19% Similarity=0.254 Sum_probs=83.5
Q ss_pred CCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCC
Q 003886 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (789)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (789)
....|+||++||.+.+ ...|......|+++||.|+++|+|| +|.+.... .....+++..+.+..+++.- -
T Consensus 9 ~~~~~~vvllHG~~~~--~~~~~~~~~~l~~~g~~v~~~D~~G---~G~S~~~~----~~~~~~~~~~~~~~~~l~~l-~ 78 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHG--AWCWYKIVALMRSSGHNVTALDLGA---SGINPKQA----LQIPNFSDYLSPLMEFMASL-P 78 (267)
T ss_dssp -CCCCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTCSCCG----GGCCSHHHHHHHHHHHHHTS-C
T ss_pred CCCCCeEEEECCCCCC--cchHHHHHHHHHhcCCeEEEecccc---CCCCCCcC----CccCCHHHHHHHHHHHHHhc-C
Confidence 3567899999997764 5678888889999999999999998 55543221 11234666666666666652 1
Q ss_pred CCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
+.+++.|+|||+||.+++.++.++|++++++|+.++..
T Consensus 79 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 116 (267)
T 3sty_A 79 ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLM 116 (267)
T ss_dssp TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCC
T ss_pred CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCC
Confidence 46899999999999999999999999999999998854
No 133
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.59 E-value=1.3e-14 Score=151.96 Aligned_cols=116 Identities=18% Similarity=0.268 Sum_probs=87.4
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....- +.|+||++||.+.+ ...|......|.++||.|+++|+|| +|.+... .....
T Consensus 17 ~g~~l~~~~~g--------~~~~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~S~~~-----~~~~~ 78 (309)
T 3u1t_A 17 EGATIAYVDEG--------SGQPVLFLHGNPTS--SYLWRNIIPYVVAAGYRAVAPDLIG---MGDSAKP-----DIEYR 78 (309)
T ss_dssp TTEEEEEEEEE--------CSSEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCCC-----SSCCC
T ss_pred CCeEEEEEEcC--------CCCEEEEECCCcch--hhhHHHHHHHHHhCCCEEEEEccCC---CCCCCCC-----CcccC
Confidence 67777654432 25789999997764 5567777778888999999999998 5554321 11345
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
++++.+.+..+++. ++.+++.|+|||+||++++.++.++|++++++|+.+|...
T Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 132 (309)
T 3u1t_A 79 LQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVP 132 (309)
T ss_dssp HHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCT
T ss_pred HHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCC
Confidence 66777766666665 3457899999999999999999999999999999987543
No 134
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.59 E-value=6e-14 Score=144.75 Aligned_cols=117 Identities=17% Similarity=0.216 Sum_probs=84.7
Q ss_pred ecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
+..+|..++...+- +.|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+... ..
T Consensus 4 ~~~~g~~l~y~~~g--------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~ 65 (274)
T 1a8q_A 4 TTRDGVEIFYKDWG--------QGRPVVFIHGWPLN--GDAWQDQLKAVVDAGYRGIAHDRRG---HGHSTPV-----WD 65 (274)
T ss_dssp ECTTSCEEEEEEEC--------SSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SS
T ss_pred EccCCCEEEEEecC--------CCceEEEECCCcch--HHHHHHHHHHHHhCCCeEEEEcCCC---CCCCCCC-----CC
Confidence 44567777543331 24679999997664 5678778889999999999999998 5554321 11
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPL 705 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-p~~~~a~v~~~pv 705 (789)
...++++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++.
T Consensus 66 ~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (274)
T 1a8q_A 66 GYDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAI 121 (274)
T ss_dssp CCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCcHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCC
Confidence 23455555555555554 4557899999999999999877665 8999999999864
No 135
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.58 E-value=1.7e-14 Score=155.13 Aligned_cols=140 Identities=18% Similarity=0.124 Sum_probs=90.9
Q ss_pred ecCCC--eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc-hh-----hHHHHHHHH-HCCcEEEEEcCCCCCCCCchh
Q 003886 569 TKGAQ--KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SS-----YSKSLAFLS-SVGYSLLIVNYRGSLGFGEEA 639 (789)
Q Consensus 569 ~~~~g--~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~-----~~~~~~~la-~~Gy~V~~~d~rGs~G~G~~~ 639 (789)
++.+| ..+.|+++.|.+. .++.|+|++.||....... .+ .......|+ ++||+|+++||||.++.+...
T Consensus 51 ~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~ 128 (377)
T 4ezi_A 51 QSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTL 128 (377)
T ss_dssp ECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSS
T ss_pred ECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCC
Confidence 34445 5688999999852 4679999999997743211 11 112445688 999999999999965543311
Q ss_pred hccCCCCCCcccHHHHHHHHHHHHHc-CCCCCccEEEEEcCccHHHHHHHHHhCC----C-ceeEEEEeCCccchhh
Q 003886 640 LQSLPGKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAP----D-KFVAAAARNPLCNLAL 710 (789)
Q Consensus 640 ~~~~~~~~~~~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~~~~~p----~-~~~a~v~~~pv~~~~~ 710 (789)
.....+.....++.|...++..+.+. +..+.+||+++|||+||+++++++..+| + .++++++.++..|+..
T Consensus 129 ~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~ 205 (377)
T 4ezi_A 129 HPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEE 205 (377)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHH
Confidence 11100000111233444444444333 4346799999999999999999988654 3 6899999999888754
No 136
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.58 E-value=7.1e-15 Score=151.56 Aligned_cols=172 Identities=13% Similarity=-0.006 Sum_probs=115.3
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-----hhHHHHHHHHHC----CcEEEEEcCCCCCCCCchhhc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----SYSKSLAFLSSV----GYSLLIVNYRGSLGFGEEALQ 641 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-----~~~~~~~~la~~----Gy~V~~~d~rGs~G~G~~~~~ 641 (789)
.+|..+.+.++.|+++...+++|+||++||+++..... .+......|+++ ||.|+.+|+++.+. + .
T Consensus 41 ~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~-~--~-- 115 (268)
T 1jjf_A 41 ATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGP-G--I-- 115 (268)
T ss_dssp TTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCT-T--C--
T ss_pred ccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCc-c--c--
Confidence 35788999999999876678899999999987643211 122345677776 59999999997421 1 0
Q ss_pred cCCCCCCcccHHH-HHHHHHHHHHcCCC--CCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCC
Q 003886 642 SLPGKVGSQDVND-VLTAIDHVIDMGLA--NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIP 718 (789)
Q Consensus 642 ~~~~~~~~~~~~D-~~~~i~~l~~~~~~--d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~ 718 (789)
...+. ...++ +.++++++.++..+ |.+|++|+|||+||++++.++.++|++|+++++.+|..++..
T Consensus 116 --~~~~~-~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~-------- 184 (268)
T 1jjf_A 116 --ADGYE-NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYP-------- 184 (268)
T ss_dssp --SCHHH-HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCC--------
T ss_pred --cccHH-HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCc--------
Confidence 00110 11233 44566777665434 889999999999999999999999999999999999764311
Q ss_pred cchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCC-CEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 719 DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~-P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
+ ...+.. .. .. ...+. |+|++||++|..||. +.++++.|+
T Consensus 185 -~--~~~~~~---------~~-~~-------------~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~ 225 (268)
T 1jjf_A 185 -N--ERLFPD---------GG-KA-------------AREKLKLLFIACGTNDSLIGF--GQRVHEYCV 225 (268)
T ss_dssp -H--HHHCTT---------TT-HH-------------HHHHCSEEEEEEETTCTTHHH--HHHHHHHHH
T ss_pred -h--hhhcCc---------ch-hh-------------hhhcCceEEEEecCCCCCccH--HHHHHHHHH
Confidence 0 000100 00 00 01223 499999999999985 566766664
No 137
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.58 E-value=2.7e-14 Score=147.49 Aligned_cols=119 Identities=18% Similarity=0.265 Sum_probs=86.0
Q ss_pred ecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
+..+|..++...+-|. +.|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+.... .
T Consensus 4 ~~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~-----~ 67 (275)
T 1a88_A 4 TTSDGTNIFYKDWGPR------DGLPVVFHHGWPLS--ADDWDNQMLFFLSHGYRVIAHDRRG---HGRSDQPS-----T 67 (275)
T ss_dssp ECTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCCS-----S
T ss_pred EccCCCEEEEEEcCCC------CCceEEEECCCCCc--hhhHHHHHHHHHHCCceEEEEcCCc---CCCCCCCC-----C
Confidence 4457777776555432 34789999997664 5578778889999999999999998 55543211 1
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPL 705 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-p~~~~a~v~~~pv 705 (789)
...++++.+.+..+++. ++.+++.|+|||+||++++.++.++ |++++++|+.++.
T Consensus 68 ~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 123 (275)
T 1a88_A 68 GHDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123 (275)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCC
T ss_pred CCCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCC
Confidence 23455555555555444 3456899999999999999877776 9999999999864
No 138
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.58 E-value=2.7e-14 Score=147.28 Aligned_cols=118 Identities=19% Similarity=0.295 Sum_probs=85.2
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCC
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~ 647 (789)
++..+|..++....- ..|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+... .
T Consensus 3 ~~~~~g~~l~y~~~g--------~~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~-----~ 64 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG--------SGQPIVFSHGWPLN--ADSWESQMIFLAAQGYRVIAHDRRG---HGRSSQP-----W 64 (273)
T ss_dssp EECTTSCEEEEEEES--------CSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----S
T ss_pred EecCCCcEEEEEEcC--------CCCEEEEECCCCCc--HHHHhhHHhhHhhCCcEEEEECCCC---CCCCCCC-----C
Confidence 344577777543321 24679999997664 5678778889999999999999998 5554321 1
Q ss_pred CcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 003886 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPL 705 (789)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-p~~~~a~v~~~pv 705 (789)
....++++.+.+..+++. ++.+++.|+|||+||.+++.++.++ |++++++|+.++.
T Consensus 65 ~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (273)
T 1a8s_A 65 SGNDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAV 121 (273)
T ss_dssp SCCSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEccc
Confidence 123455555555555554 4567899999999999999877665 8999999999864
No 139
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.58 E-value=6.5e-15 Score=150.11 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=109.8
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEE--cCCCCCCCCchhhccC-CCCCC----cccHHHHHHHHHHH
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEALQSL-PGKVG----SQDVNDVLTAIDHV 662 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~--d~rGs~G~G~~~~~~~-~~~~~----~~~~~D~~~~i~~l 662 (789)
++.|+||++||++.+ ...|......|++ +|.|+++ |++|.++++ +.... .+... ...++|+.+.++++
T Consensus 60 ~~~p~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 134 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGD--ENQFFDFGARLLP-QATILSPVGDVSEHGAAR--FFRRTGEGVYDMVDLERATGKMADFIKAN 134 (251)
T ss_dssp TTSCEEEEECCTTCC--HHHHHHHHHHHST-TSEEEEECCSEEETTEEE--SSCBCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCC--HhHHHHHHHhcCC-CceEEEecCCcCCCCCcc--cccCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 578999999997754 5566667777766 4999999 676633221 10000 01111 11256777778877
Q ss_pred HHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhh
Q 003886 663 IDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED 742 (789)
Q Consensus 663 ~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (789)
.++. +.++++|+|||+||++++.++.++|++++++|+.+|..+...
T Consensus 135 ~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-------------------------------- 180 (251)
T 2r8b_A 135 REHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------------- 180 (251)
T ss_dssp HHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC--------------------------------
T ss_pred Hhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc--------------------------------
Confidence 7763 789999999999999999999999999999999999764210
Q ss_pred HHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 743 LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 743 ~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
......+++|+|++||++|..||++++.++++.++
T Consensus 181 ---------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~ 215 (251)
T 2r8b_A 181 ---------KISPAKPTRRVLITAGERDPICPVQLTKALEESLK 215 (251)
T ss_dssp ---------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHH
T ss_pred ---------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHH
Confidence 01234568899999999999999999999999886
No 140
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.58 E-value=3.1e-14 Score=148.29 Aligned_cols=186 Identities=18% Similarity=0.289 Sum_probs=113.7
Q ss_pred CcEEEEEcCCC-CCCCchhhHHHH-HHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 592 DPLIVVLHGGP-HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 592 ~P~vv~~HGg~-~~~~~~~~~~~~-~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
.|.||++||.+ ++.....|.... ..|++. |.|+++|+|| +|.+.... . ....++++.+.+..+++. ++
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~---~-~~~~~~~~a~dl~~~l~~--l~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPG---FNKSDAVV---M-DEQRGLVNARAVKGLMDA--LD 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTT---STTSCCCC---C-SSCHHHHHHHHHHHHHHH--TT
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCC---CCCCCCCC---C-cCcCHHHHHHHHHHHHHH--hC
Confidence 36899999964 333344666666 777765 9999999998 66554211 1 123566666666666665 45
Q ss_pred CccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCC------------CCcchhhhh----ccCc--cc
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYVES----YGSK--GK 731 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~------------~~~~~~~~~----~~~~--~~ 731 (789)
.+++.|+|||+||.+++.+|.++|++++++|+.+|............ .+.+..... +... ..
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 182 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGC
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccC
Confidence 67899999999999999999999999999999987542100000000 000000000 0000 00
Q ss_pred -----c-ccC-CCCChhhHHHHH---------hcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 732 -----D-SFT-ESPSVEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 732 -----~-~~~-~~~~~~~~~~~~---------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
+ ++. ..........+. ..+....+.++++|+|+++|++|..+|++.+.++.+.+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~ 254 (286)
T 2puj_A 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD 254 (286)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSS
T ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCCC
Confidence 0 000 000000001111 1122345778999999999999999999999999998875
No 141
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.57 E-value=1.9e-12 Score=140.83 Aligned_cols=245 Identities=11% Similarity=0.113 Sum_probs=156.4
Q ss_pred ecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003886 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (789)
Q Consensus 102 ~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (789)
..++|||++++++.. ....|+++++. .++........ ..+...+|||||++|++....+ ..+
T Consensus 37 ~~~s~dg~~l~~~~~--------~d~~i~v~d~~--~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~~---~~v 98 (391)
T 1l0q_A 37 AVISPDGTKVYVANA--------HSNDVSIIDTA--TNNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMAS---STL 98 (391)
T ss_dssp EEECTTSSEEEEEEG--------GGTEEEEEETT--TTEEEEEEECS-----SSEEEEEECTTSSEEEEEETTT---TEE
T ss_pred EEECCCCCEEEEECC--------CCCeEEEEECC--CCeEEEEEECC-----CCccceEECCCCCEEEEEECCC---CEE
Confidence 345799998866432 23467777752 22222221122 3577899999999998875432 234
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
..++ ..++....+...... ..+.|+|||++|++....
T Consensus 99 ~v~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~~~~~~-------------------------------- 136 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVKTGKSP----------LGLALSPDGKKLYVTNNG-------------------------------- 136 (391)
T ss_dssp EEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEETT--------------------------------
T ss_pred EEEECCCCeEEEEEeCCCCc----------ceEEECCCCCEEEEEeCC--------------------------------
Confidence 4444 455555555433333 689999999998776432
Q ss_pred CCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEE
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (789)
...|++||+.+++.... ......+..+.|+|||+. |++++. ....|+++
T Consensus 137 -----------~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~dg~~----l~~~~~--------------~~~~v~~~ 185 (391)
T 1l0q_A 137 -----------DKTVSVINTVTKAVINT--VSVGRSPKGIAVTPDGTK----VYVANF--------------DSMSISVI 185 (391)
T ss_dssp -----------TTEEEEEETTTTEEEEE--EECCSSEEEEEECTTSSE----EEEEET--------------TTTEEEEE
T ss_pred -----------CCEEEEEECCCCcEEEE--EecCCCcceEEECCCCCE----EEEEeC--------------CCCEEEEE
Confidence 36799999999887655 333445678999999997 766542 22368999
Q ss_pred ecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcc
Q 003886 341 RVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 420 (789)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t 420 (789)
|+ .+++..............+|+|||++|+..+... ....|++||+.+++...
T Consensus 186 d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~--------~~~~v~~~d~~~~~~~~-- 238 (391)
T 1l0q_A 186 DT-----------------VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK--------YFNTVSMIDTGTNKITA-- 238 (391)
T ss_dssp ET-----------------TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS--------SCCEEEEEETTTTEEEE--
T ss_pred EC-----------------CCCeEEEEEecCCCccceEECCCCCEEEEEecCc--------CCCcEEEEECCCCeEEE--
Confidence 98 4555444433444567789999999988777421 12469999987654321
Q ss_pred cceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003886 421 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (789)
Q Consensus 421 ~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt 484 (789)
... .. ..+..+.|+|||+.|+++...++ .|..+|+.++++....
T Consensus 239 -----~~~---~~----------~~~~~~~~s~dg~~l~~s~~~d~--~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 239 -----RIP---VG----------PDPAGIAVTPDGKKVYVALSFXN--TVSVIDTATNTITATM 282 (391)
T ss_dssp -----EEE---CC----------SSEEEEEECTTSSEEEEEETTTT--EEEEEETTTTEEEEEE
T ss_pred -----EEe---cC----------CCccEEEEccCCCEEEEEcCCCC--EEEEEECCCCcEEEEE
Confidence 111 00 01235689999998887765454 4666788888876543
No 142
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.57 E-value=5.5e-14 Score=146.14 Aligned_cols=201 Identities=17% Similarity=0.199 Sum_probs=117.1
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~-~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~ 649 (789)
.+|..++....-+ ...|+||++||.+ +......|......|++. |.|+++|+|| +|.+.... . ..
T Consensus 14 ~~g~~l~y~~~g~------~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~--~--~~ 79 (285)
T 1c4x_A 14 SGTLASHALVAGD------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIG---FGQSEYPE--T--YP 79 (285)
T ss_dssp CTTSCEEEEEESC------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTT---STTSCCCS--S--CC
T ss_pred ECCEEEEEEecCC------CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCC---CCCCCCCC--C--cc
Confidence 3566676543321 2347799999964 322344666666777665 9999999998 55543211 1 02
Q ss_pred ccHHHH----HHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchh--------hhhcCCCC
Q 003886 650 QDVNDV----LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA--------LMVGTTDI 717 (789)
Q Consensus 650 ~~~~D~----~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~--------~~~~~~~~ 717 (789)
..++++ .+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|..... .+......
T Consensus 80 ~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 157 (285)
T 1c4x_A 80 GHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYAD 157 (285)
T ss_dssp SSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGS
T ss_pred cchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhcc
Confidence 345555 5555555554 345789999999999999999999999999999998754210 00000000
Q ss_pred CcchhhhhccCccccccCCC--C------------ChhhHHHHHh------------cCccccCCCCCCCEEEEEeCCCC
Q 003886 718 PDWCYVESYGSKGKDSFTES--P------------SVEDLTRFHS------------KSPISHISKVKTPTIFLLGAQDL 771 (789)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~------------~sp~~~~~~i~~P~Lii~G~~D~ 771 (789)
+.+.....+........... . .......+.. ......+.++++|+|+++|++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 237 (285)
T 1c4x_A 158 PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDR 237 (285)
T ss_dssp CCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCS
T ss_pred ccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCe
Confidence 00000000000000000000 0 0000010000 01123467899999999999999
Q ss_pred CCChHHHHHHHHHCCC
Q 003886 772 RVPVSNGLQVIYHIPF 787 (789)
Q Consensus 772 ~vp~~~~~~l~~~l~~ 787 (789)
.+|++.+..+++.+++
T Consensus 238 ~~p~~~~~~~~~~~~~ 253 (285)
T 1c4x_A 238 IVPLDTSLYLTKHLKH 253 (285)
T ss_dssp SSCTHHHHHHHHHCSS
T ss_pred eeCHHHHHHHHHhCCC
Confidence 9999999999998865
No 143
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.57 E-value=8.9e-15 Score=152.50 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=87.1
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....-+ ...|+||++||++.+ ...|......|+ +||.|+++|+|| +|.+.... ....
T Consensus 18 ~g~~l~~~~~g~------~~~~~vl~lHG~~~~--~~~~~~~~~~l~-~~~~v~~~d~~G---~G~s~~~~-----~~~~ 80 (299)
T 3g9x_A 18 LGERMHYVDVGP------RDGTPVLFLHGNPTS--SYLWRNIIPHVA-PSHRCIAPDLIG---MGKSDKPD-----LDYF 80 (299)
T ss_dssp TTEEEEEEEESC------SSSCCEEEECCTTCC--GGGGTTTHHHHT-TTSCEEEECCTT---STTSCCCC-----CCCC
T ss_pred CCeEEEEEecCC------CCCCEEEEECCCCcc--HHHHHHHHHHHc-cCCEEEeeCCCC---CCCCCCCC-----Cccc
Confidence 677777655533 235789999997764 456666667774 699999999998 55443211 1345
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++++.+.+..+++. ++.+++.|+|||+||++++.++.++|++++++|+.++..
T Consensus 81 ~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 133 (299)
T 3g9x_A 81 FDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIR 133 (299)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCc
Confidence 77777777777776 456789999999999999999999999999999988544
No 144
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.57 E-value=2e-14 Score=146.45 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=80.4
Q ss_pred cEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCcc
Q 003886 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (789)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (789)
|+||++||.+.+ ...|......|+++||.|+++|+|| +|.+.... .....+++..+.+..+++.-.. .++
T Consensus 5 ~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~----~~~~~~~~~~~~l~~~l~~l~~-~~~ 74 (258)
T 3dqz_A 5 HHFVLVHNAYHG--AWIWYKLKPLLESAGHRVTAVELAA---SGIDPRPI----QAVETVDEYSKPLIETLKSLPE-NEE 74 (258)
T ss_dssp CEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSSCG----GGCCSHHHHHHHHHHHHHTSCT-TCC
T ss_pred CcEEEECCCCCc--cccHHHHHHHHHhCCCEEEEecCCC---CcCCCCCC----CccccHHHhHHHHHHHHHHhcc-cCc
Confidence 899999997764 5567778889999999999999998 55443211 1123566666666666665211 378
Q ss_pred EEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 673 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 673 v~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
+.|+|||+||++++.++.++|++++++|+.+|..
T Consensus 75 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 108 (258)
T 3dqz_A 75 VILVGFSFGGINIALAADIFPAKIKVLVFLNAFL 108 (258)
T ss_dssp EEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCC
T ss_pred eEEEEeChhHHHHHHHHHhChHhhcEEEEecCCC
Confidence 9999999999999999999999999999998854
No 145
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.57 E-value=1.1e-14 Score=145.57 Aligned_cols=151 Identities=13% Similarity=0.142 Sum_probs=111.4
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEE--cCCCCCCCCchhh--ccCCCCCC----cccHHHHHHHHHH
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEAL--QSLPGKVG----SQDVNDVLTAIDH 661 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~--d~rGs~G~G~~~~--~~~~~~~~----~~~~~D~~~~i~~ 661 (789)
++.|+||++||++.. ...|......|++ ||.|+++ |++| +|.+.. ....+.+. ..+++++.+.+++
T Consensus 36 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~~~d~~g---~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGN--ELDLLPLAEIVDS-EASVLSVRGNVLE---NGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDE 109 (226)
T ss_dssp TTSCEEEEECCTTCC--TTTTHHHHHHHHT-TSCEEEECCSEEE---TTEEESSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCC--hhHHHHHHHHhcc-CceEEEecCcccC---CcchhhccccCccCcChhhHHHHHHHHHHHHHH
Confidence 578999999997764 4567777778877 9999999 7766 333211 00011111 1124456666766
Q ss_pred HHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChh
Q 003886 662 VIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVE 741 (789)
Q Consensus 662 l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (789)
+.++..++.++++++|||+||++++.++.++|++++++|+.+|......
T Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------- 158 (226)
T 2h1i_A 110 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------------- 158 (226)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------------
T ss_pred HHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------------
Confidence 6777667889999999999999999999999999999999998753210
Q ss_pred hHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 742 DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 742 ~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
......+++|+|+++|++|..+|++.+.++++.+++
T Consensus 159 ----------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~ 194 (226)
T 2h1i_A 159 ----------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLEN 194 (226)
T ss_dssp ----------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHT
T ss_pred ----------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHh
Confidence 011234578999999999999999999999998864
No 146
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.57 E-value=7.2e-15 Score=151.54 Aligned_cols=186 Identities=14% Similarity=0.214 Sum_probs=117.3
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCc
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (789)
.|+||++||.+.+ ...|......|++ ||.|+++|+|| +|.+..... .......++++.+.+..+++. ++.+
T Consensus 28 ~~~vv~lHG~~~~--~~~~~~~~~~l~~-g~~v~~~d~~G---~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~ 98 (282)
T 3qvm_A 28 EKTVLLAHGFGCD--QNMWRFMLPELEK-QFTVIVFDYVG---SGQSDLESF-STKRYSSLEGYAKDVEEILVA--LDLV 98 (282)
T ss_dssp SCEEEEECCTTCC--GGGGTTTHHHHHT-TSEEEECCCTT---STTSCGGGC-CTTGGGSHHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHhc-CceEEEEecCC---CCCCCCCCC-CccccccHHHHHHHHHHHHHH--cCCC
Confidence 3899999997664 4567667778877 99999999998 444433221 111222566777777766665 3568
Q ss_pred cEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcC--CCCC----------------cch--hhh-hccCcc
Q 003886 672 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT--TDIP----------------DWC--YVE-SYGSKG 730 (789)
Q Consensus 672 rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~--~~~~----------------~~~--~~~-~~~~~~ 730 (789)
+++|+|||+||.+++.++.++|++++++|+.+|.......... .... .|. +.. .+....
T Consensus 99 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T 3qvm_A 99 NVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH 178 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTS
T ss_pred ceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCcc
Confidence 9999999999999999999999999999999987542111000 0000 000 000 000000
Q ss_pred --------ccccCCCCChhh----HHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 731 --------KDSFTESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 731 --------~~~~~~~~~~~~----~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.+.+... .... .......+....+.++++|+|+++|++|..+|++.+.++.+.+++
T Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 246 (282)
T 3qvm_A 179 SSELIGELSGSFCTT-DPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPN 246 (282)
T ss_dssp CHHHHHHHHHHHHHS-CHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSSS
T ss_pred chhhHHHHHHHHhcC-CcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCC
Confidence 0000000 0000 011112233455788999999999999999999999999998865
No 147
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.57 E-value=6.1e-13 Score=154.26 Aligned_cols=299 Identities=16% Similarity=0.121 Sum_probs=176.1
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (789)
.||||+++++... ..+.++++. ++.....++... ..+...+|||||++||..+..+ ...
T Consensus 26 ~spdg~~l~~~~~----------~~v~l~~~~-~~~~~~~~~~h~-----~~v~~~~~spdg~~lasg~~d~-----~v~ 84 (611)
T 1nr0_A 26 NTPAGDKIQYCNG----------TSVYTVPVG-SLTDTEIYTEHS-----HQTTVAKTSPSGYYCASGDVHG-----NVR 84 (611)
T ss_dssp ECTTSSEEEEEET----------TEEEEEETT-CSSCCEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----EEE
T ss_pred eCCCCCEEEeCCC----------CEEEEecCC-CcccCeEecCCC-----CceEEEEECCCCcEEEEEeCCC-----CEE
Confidence 4799999998631 145555552 222233344333 4588999999999999887654 567
Q ss_pred Eec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC--CCCCccCCCCCCCCCCcCCCCCCCccee
Q 003886 184 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP--SKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (789)
Q Consensus 184 i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (789)
+|+ .++......+. ...+.| ..++|||||++|+.++.+... ....|+. .........+........|
T Consensus 85 lWd~~~~~~~~~~~~~-~~~~~v------~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f 155 (611)
T 1nr0_A 85 IWDTTQTTHILKTTIP-VFSGPV------KDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVDF 155 (611)
T ss_dssp EEESSSTTCCEEEEEE-CSSSCE------EEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEEE
T ss_pred EeECCCCcceeeEeec-ccCCce------EEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEEE
Confidence 773 23322222221 122333 799999999999987764321 1122331 2222233445555566778
Q ss_pred eCCccc-ccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceE
Q 003886 260 EEDWGE-TYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (789)
Q Consensus 260 ~~d~g~-~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~ 338 (789)
.|+... ..++..+..|.+||..+++..... ......+..++|+|||+. |+..+. +..|.
T Consensus 156 ~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~~----las~s~---------------D~~i~ 215 (611)
T 1nr0_A 156 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGSL----FASTGG---------------DGTIV 215 (611)
T ss_dssp CSSSSCEEEEEETTSCEEEEETTTBEEEEEE-CCCSSCEEEEEECTTSSE----EEEEET---------------TSCEE
T ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeEeeee-ccccCceEEEEECCCCCE----EEEEEC---------------CCcEE
Confidence 888543 455667788999998887654431 223346789999999997 776652 33677
Q ss_pred EEecccccchhhhhhhhcCCCCCCCe-eecC-------CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEee
Q 003886 339 AVRVSLYKSEASELELKESSSEDLPV-VNLT-------ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 410 (789)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt-------~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d 410 (789)
++|+ .+++. ..+. .+.+.+...+|||||++|+..+.+. .+.+||
T Consensus 216 lwd~-----------------~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~-----------~v~lWd 267 (611)
T 1nr0_A 216 LYNG-----------------VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-----------TIKIWN 267 (611)
T ss_dssp EEET-----------------TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-----------EEEEEE
T ss_pred EEEC-----------------CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC-----------eEEEEe
Confidence 8886 33332 3332 4566788899999999998777553 588899
Q ss_pred cCCCCCCCccc-c------e---------------eeEEeeeeccCCC---CCccccccCCCCCccccCCCEEEEEEEeC
Q 003886 411 WPTNGNFSSLE-K------I---------------VDVIPVVQCAEGD---CFPGLYSSSILSNPWLSDGCTMLLSSIWG 465 (789)
Q Consensus 411 ~~~~~~~~~t~-~------~---------------~~v~~~~~~~~~~---~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~ 465 (789)
+.++....... . . +..+.++...... .+.| +...+..+.|+|||+.| +++..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-h~~~v~~l~~spdg~~l-~s~s~D 345 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-HNKAITALSSSADGKTL-FSADAE 345 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEE-EEEETT
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-CCCCEEEEEEeCCCCEE-EEEeCC
Confidence 87654321000 0 0 0000111100000 0001 11234567899999966 555556
Q ss_pred CeEEEEEEECCCCcEEEec
Q 003886 466 SSQVIISVNVSSGELLRIT 484 (789)
Q Consensus 466 ~~~~l~~~dl~tg~~~~lt 484 (789)
+... .+|+.+++..++.
T Consensus 346 ~~v~--~Wd~~~~~~~~~~ 362 (611)
T 1nr0_A 346 GHIN--SWDISTGISNRVF 362 (611)
T ss_dssp SCEE--EEETTTCCEEECS
T ss_pred CcEE--EEECCCCceeeec
Confidence 6554 4578888877664
No 148
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.57 E-value=4.8e-14 Score=147.35 Aligned_cols=121 Identities=12% Similarity=0.211 Sum_probs=89.6
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
.+|.+++....- +.|.||++||.+.+ ...|......|++ ||.|+++|+|| +|.+............
T Consensus 20 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~v~~~D~~G---~G~S~~~~~~~~~~~~ 85 (306)
T 3r40_A 20 TSSGRIFARVGG--------DGPPLLLLHGFPQT--HVMWHRVAPKLAE-RFKVIVADLPG---YGWSDMPESDEQHTPY 85 (306)
T ss_dssp CTTCCEEEEEEE--------CSSEEEEECCTTCC--GGGGGGTHHHHHT-TSEEEEECCTT---STTSCCCCCCTTCGGG
T ss_pred eCCEEEEEEEcC--------CCCeEEEECCCCCC--HHHHHHHHHHhcc-CCeEEEeCCCC---CCCCCCCCCCcccCCC
Confidence 367777655432 34789999998764 4567777788877 99999999998 5554322211111234
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
.++++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|...
T Consensus 86 ~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 140 (306)
T 3r40_A 86 TKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPT 140 (306)
T ss_dssp SHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCH
T ss_pred CHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCC
Confidence 567777777777766 4567899999999999999999999999999999997543
No 149
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.56 E-value=3.2e-14 Score=147.91 Aligned_cols=196 Identities=17% Similarity=0.201 Sum_probs=116.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-chhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
+|..++....- ..|.||++||.+.+.. ...|......| +.||.|+++|+|| +|.+.... . ...
T Consensus 13 ~g~~l~y~~~G--------~g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G---~G~S~~~~---~-~~~ 76 (282)
T 1iup_A 13 AGVLTNYHDVG--------EGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVG---FGFTDRPE---N-YNY 76 (282)
T ss_dssp TTEEEEEEEEC--------CSSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTT---STTSCCCT---T-CCC
T ss_pred CCEEEEEEecC--------CCCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCC---CCCCCCCC---C-CCC
Confidence 56666544321 2367999999543222 22455555666 6789999999998 56543211 1 123
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccch-------hhhhcCCCCCcchhh
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-------ALMVGTTDIPDWCYV 723 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~-------~~~~~~~~~~~~~~~ 723 (789)
.+++..+.+..+++. ++.+++.|+|||+||.+++.+|.++|++++++|+.+|.... ...... .+.....
T Consensus 77 ~~~~~a~dl~~~l~~--l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 152 (282)
T 1iup_A 77 SKDSWVDHIIGIMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY--TPSIENM 152 (282)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTC--CSCHHHH
T ss_pred CHHHHHHHHHHHHHH--hCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcC--CCcHHHH
Confidence 466666666666665 34578999999999999999999999999999999875421 000000 0000000
Q ss_pred ----hhccCc-------ccc-cc--CCCCCh-hhHHHH--------Hh-c-CccccCCCCCCCEEEEEeCCCCCCChHHH
Q 003886 724 ----ESYGSK-------GKD-SF--TESPSV-EDLTRF--------HS-K-SPISHISKVKTPTIFLLGAQDLRVPVSNG 778 (789)
Q Consensus 724 ----~~~~~~-------~~~-~~--~~~~~~-~~~~~~--------~~-~-sp~~~~~~i~~P~Lii~G~~D~~vp~~~~ 778 (789)
..+... ..+ ++ ...+.. .....+ .+ . .....+.++++|+|+++|++|..+|++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~ 232 (282)
T 1iup_A 153 RNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSS 232 (282)
T ss_dssp HHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHH
T ss_pred HHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHH
Confidence 000000 000 00 000000 000000 00 0 01135678999999999999999999999
Q ss_pred HHHHHHCCC
Q 003886 779 LQVIYHIPF 787 (789)
Q Consensus 779 ~~l~~~l~~ 787 (789)
.++.+.+++
T Consensus 233 ~~~~~~~~~ 241 (282)
T 1iup_A 233 LRLGELIDR 241 (282)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHhCCC
Confidence 999988865
No 150
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.56 E-value=4.2e-14 Score=147.33 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=87.7
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-hhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
..+|..++....-|+ ..|.||++||.+.+ .. .|......| +.||.|+++|+|| +|.+... +....
T Consensus 9 ~~~g~~l~~~~~G~~------~~~~vvllHG~~~~--~~~~w~~~~~~L-~~~~~vi~~Dl~G---~G~S~~~--~~~~~ 74 (286)
T 2yys_A 9 PVGEAELYVEDVGPV------EGPALFVLHGGPGG--NAYVLREGLQDY-LEGFRVVYFDQRG---SGRSLEL--PQDPR 74 (286)
T ss_dssp ECSSCEEEEEEESCT------TSCEEEEECCTTTC--CSHHHHHHHGGG-CTTSEEEEECCTT---STTSCCC--CSCGG
T ss_pred eECCEEEEEEeecCC------CCCEEEEECCCCCc--chhHHHHHHHHh-cCCCEEEEECCCC---CCCCCCC--ccCcc
Confidence 346777876655442 34789999998775 45 677777777 5689999999998 5554320 11111
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
...++++.+.+..+++. ++.+++.|+|||+||.+++.++.++|+ ++++|+.+|..+
T Consensus 75 ~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~ 130 (286)
T 2yys_A 75 LFTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVN 130 (286)
T ss_dssp GCCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCB
T ss_pred cCcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccC
Confidence 23466666666666665 345789999999999999999999999 999999998653
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.56 E-value=7.6e-13 Score=140.41 Aligned_cols=258 Identities=8% Similarity=-0.017 Sum_probs=147.7
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEE-EEeCCCCCeEEEEecCCCCCC
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASA-VVPSPSGSKLLVVRNPENESP 179 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~-~~~SPdG~~la~~~~~~~~~~ 179 (789)
....+|||+++.+.... ...++.+++.+..-....++.. ..... ++|||||++|+ +....++..
T Consensus 44 ~~~~s~dg~~l~~~~~~--------~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~-~~~~~~~~~ 108 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDF--------CQTLVQIETQLEPPKVVAIQEG------QSSMADVDITPDDQFAV-TVTGLNHPF 108 (331)
T ss_dssp EEEECSSSCEEEEEEST--------TCEEEEEECSSSSCEEEEEEEC------SSCCCCEEECTTSSEEE-ECCCSSSSC
T ss_pred eEEEcCCCCEEEEEeCC--------CCeEEEEECCCCceeEEecccC------CCCccceEECCCCCEEE-EecCCCCcc
Confidence 44467999977554321 2377887763321102222222 23445 89999999998 544332222
Q ss_pred eEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcce
Q 003886 180 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (789)
Q Consensus 180 ~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (789)
.++.++ ..++..+.+...... ..+.|||||++|++.....
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~~~----------~~~~~spdg~~l~~~~~~~----------------------------- 149 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPYDA----------VGIAISPNGNGLILIDRSS----------------------------- 149 (331)
T ss_dssp EEEEEETTTTEEEEEEECCTTE----------EEEEECTTSSCEEEEEETT-----------------------------
T ss_pred cEEEEECCCCCeEEEEECCCCc----------cceEECCCCCEEEEEecCC-----------------------------
Confidence 565555 456655555443333 6899999999877654421
Q ss_pred eeCCcccccCCccCce-EEEEEccCC-ce----EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeecc
Q 003886 259 WEEDWGETYAGKRQPS-LFVININSG-EV----QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYN 332 (789)
Q Consensus 259 ~~~d~g~~~~~~~~~~-l~v~d~~~g-~~----~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~ 332 (789)
.. |.+|+++.. .+ ... .........++|+|||+. |+++..
T Consensus 150 --------------~~~i~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~spdg~~----l~v~~~-------------- 195 (331)
T 3u4y_A 150 --------------ANTVRRFKIDADGVLFDTGQEF--ISGGTRPFNITFTPDGNF----AFVANL-------------- 195 (331)
T ss_dssp --------------TTEEEEEEECTTCCEEEEEEEE--ECSSSSEEEEEECTTSSE----EEEEET--------------
T ss_pred --------------CceEEEEEECCCCcEeecCCcc--ccCCCCccceEECCCCCE----EEEEeC--------------
Confidence 23 566665432 22 111 123334678899999997 666552
Q ss_pred CCcceEEEecccccchhhhhhhhcCCCCCCC----eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEE
Q 003886 333 RPCALYAVRVSLYKSEASELELKESSSEDLP----VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR 408 (789)
Q Consensus 333 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~ 408 (789)
....|+++|+ .+++ ...+.. ......++|||||++|++.... ...|++
T Consensus 196 ~~~~v~v~d~-----------------~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~----------~~~i~~ 247 (331)
T 3u4y_A 196 IGNSIGILET-----------------QNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTES----------TVDVFN 247 (331)
T ss_dssp TTTEEEEEEC-----------------SSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSS----------EEEEEE
T ss_pred CCCeEEEEEC-----------------CCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcC----------CCEEEE
Confidence 2236888887 4444 334433 3456789999999988665532 235999
Q ss_pred eecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC
Q 003886 409 IDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA 486 (789)
Q Consensus 409 ~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~ 486 (789)
+|+.+++...+.. +..-+. .... .......+.|+|||++|+++....+ .|..+|+.+..+..+...
T Consensus 248 ~d~~~~~~~~~~~----~~~~~~--~~~~----~~~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~~~~~~~~~ 313 (331)
T 3u4y_A 248 FNQLSGTLSFVKS----FGHGLL--IDPR----PLFGANQMALNKTETKLFISANISR--ELKVFTISGKVVGYVAGI 313 (331)
T ss_dssp EETTTTEEEEEEE----EECCCC--CCCG----GGTTCCCEEECTTSSEEEEEETTTT--EEEEEETTSCEEEECTTC
T ss_pred EECCCCceeeecc----cccccc--cCCC----CcccccceEECCCCCEEEEecCCCC--cEEEEEecCCcccceecc
Confidence 9988755422110 000000 0000 0011134689999999887765444 456667777766665443
No 152
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.56 E-value=6.9e-14 Score=140.90 Aligned_cols=180 Identities=13% Similarity=0.235 Sum_probs=113.9
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHH------
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVI------ 663 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~------ 663 (789)
++.|+||++||.+.+ ...|. ....|+ +||.|+++|+|| +|.+.. .....+++..+.+..++
T Consensus 14 ~~~~~vv~~hG~~~~--~~~~~-~~~~l~-~g~~v~~~d~~g---~g~s~~------~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCN--LKIFG-ELEKYL-EDYNCILLDLKG---HGESKG------QCPSTVYGYIDNVANFITNSEVT 80 (245)
T ss_dssp TCSCEEEEECCTTCC--GGGGT-TGGGGC-TTSEEEEECCTT---STTCCS------CCCSSHHHHHHHHHHHHHHCTTT
T ss_pred CCCCEEEEEeCCccc--HHHHH-HHHHHH-hCCEEEEecCCC---CCCCCC------CCCcCHHHHHHHHHHHHHhhhhH
Confidence 357899999997764 44555 555555 899999999998 444321 11234566666666555
Q ss_pred HcCCCCCccEEEEEcCccHHHHHHHHHh-CCCceeEEEEeCCccchhhhh-------cCCCCCcchhhhhccC---c---
Q 003886 664 DMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMV-------GTTDIPDWCYVESYGS---K--- 729 (789)
Q Consensus 664 ~~~~~d~~rv~l~G~S~GG~~a~~~~~~-~p~~~~a~v~~~pv~~~~~~~-------~~~~~~~~~~~~~~~~---~--- 729 (789)
+. ++ +++|+|||+||.+++.++.+ +|+ ++++|+.+|........ .......+........ .
T Consensus 81 ~~--~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (245)
T 3e0x_A 81 KH--QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSE 155 (245)
T ss_dssp TT--CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHH
T ss_pred hh--cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHH
Confidence 33 33 89999999999999999999 999 99999999976541110 0000000000000000 0
Q ss_pred -cccccCCCCC--hhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 730 -GKDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 730 -~~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
....+...+. ..........+....+.++++|+|+++|++|..+|++.+.++++.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 216 (245)
T 3e0x_A 156 KYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVEN 216 (245)
T ss_dssp HHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSS
T ss_pred HHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC
Confidence 0000011000 011122233455566788999999999999999999999999998865
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.56 E-value=3.1e-13 Score=144.72 Aligned_cols=266 Identities=11% Similarity=0.130 Sum_probs=147.0
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (789)
.||||+ + |..+.. .....++++++.. ++...+... .........++|||||++|++....+ +.-.+|.
T Consensus 47 ~spdg~-l-~~~~~~-----~~~~~v~~~~~~~--g~~~~~~~~--~~~~~~p~~~a~spdg~~l~~~~~~~-~~v~v~~ 114 (347)
T 3hfq_A 47 LSAKDC-L-YSVDKE-----DDEGGIAAWQIDG--QTAHKLNTV--VAPGTPPAYVAVDEARQLVYSANYHK-GTAEVMK 114 (347)
T ss_dssp ECTTCE-E-EEEEEE-----TTEEEEEEEEEET--TEEEEEEEE--EEESCCCSEEEEETTTTEEEEEETTT-TEEEEEE
T ss_pred EccCCe-E-EEEEec-----CCCceEEEEEecC--CcEEEeeee--ecCCCCCEEEEECCCCCEEEEEeCCC-CEEEEEE
Confidence 469998 5 443321 1245778887733 232333220 00113466789999999998876433 3333444
Q ss_pred EecCCceeEEEecCCCccccc--cCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeC
Q 003886 184 LWSQSQLEKEFHVPQTVHGSV--YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 261 (789)
Q Consensus 184 i~~~~~~~~~~~~~~~~~g~v--~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (789)
+..++....+........+.. -.......+.|||||+ |+. +..
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v-~~~--------------------------------- 159 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAV-IDL--------------------------------- 159 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEE-EET---------------------------------
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEE-EeC---------------------------------
Confidence 444455444443321111110 0001125689999999 444 322
Q ss_pred CcccccCCccCceEEEEEcc-CCceEecc--CCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceE
Q 003886 262 DWGETYAGKRQPSLFVININ-SGEVQAVK--GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (789)
Q Consensus 262 d~g~~~~~~~~~~l~v~d~~-~g~~~~l~--~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~ 338 (789)
....|++|+++ +|+...+. ..........++|+|||+. |+++... ...|+
T Consensus 160 ---------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~~~--------------~~~v~ 212 (347)
T 3hfq_A 160 ---------GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY----AFLAGEL--------------SSQIA 212 (347)
T ss_dssp ---------TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE----EEEEETT--------------TTEEE
T ss_pred ---------CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE----EEEEeCC--------------CCEEE
Confidence 22578888887 66654331 0222234567899999997 6665421 12455
Q ss_pred EEecccccchhhhhhhhcCCCCCCCeeec---CCCC------CccCcceecCCCCEEEEEecCCCCCCCCccccceeEEe
Q 003886 339 AVRVSLYKSEASELELKESSSEDLPVVNL---TESI------SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (789)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~L---t~~~------~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~ 409 (789)
++++.. .+++.+.+ .... .....++|||||++|+...... ..|.+|
T Consensus 213 v~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~----------~~v~v~ 267 (347)
T 3hfq_A 213 SLKYDT---------------QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY----------NTLAVF 267 (347)
T ss_dssp EEEEET---------------TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT----------TEEEEE
T ss_pred EEEecC---------------CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC----------CEEEEE
Confidence 555420 23332221 1111 2355689999999886655332 358888
Q ss_pred ecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003886 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (789)
Q Consensus 410 d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt 484 (789)
|+..++.. ..+..... .. ..+..+.|+|||++|++.....+...+|.+|..+|+++.+.
T Consensus 268 ~~~~~g~~-------~~~~~~~~--~~-------~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 268 AVTADGHL-------TLIQQIST--EG-------DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EECGGGCE-------EEEEEEEC--SS-------SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EECCCCcE-------EEeEEEec--CC-------CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 87643211 11111110 00 12346789999998887766668888999999999988764
No 154
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.56 E-value=2.5e-14 Score=145.58 Aligned_cols=179 Identities=20% Similarity=0.311 Sum_probs=108.7
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc-HHHHHHHHHHHHHcCCCCC
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD-VNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~-~~D~~~~i~~l~~~~~~d~ 670 (789)
.|.||++||.+++ ...|......|+++||.|+++|+|| +|.+.... ..+...+ .+|+.++++++.+.+ .
T Consensus 16 ~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---hG~s~~~~--~~~~~~~~~~d~~~~~~~l~~~~---~ 85 (247)
T 1tqh_A 16 ERAVLLLHGFTGN--SADVRMLGRFLESKGYTCHAPIYKG---HGVPPEEL--VHTGPDDWWQDVMNGYEFLKNKG---Y 85 (247)
T ss_dssp SCEEEEECCTTCC--THHHHHHHHHHHHTTCEEEECCCTT---SSSCHHHH--TTCCHHHHHHHHHHHHHHHHHHT---C
T ss_pred CcEEEEECCCCCC--hHHHHHHHHHHHHCCCEEEecccCC---CCCCHHHh--cCCCHHHHHHHHHHHHHHHHHcC---C
Confidence 4679999997654 4567777888999999999999998 45432211 1111111 345666666666553 4
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccch---hhhhcCCCCCcchhhhhc----cC------ccccccCCC
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL---ALMVGTTDIPDWCYVESY----GS------KGKDSFTES 737 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~---~~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~ 737 (789)
+++.|+|||+||.+++.++.++| ++++|+.++.... ...... . ..+...+ .. ...+.+...
T Consensus 86 ~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (247)
T 1tqh_A 86 EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEG--V--LEYAREYKKREGKSEEQIEQEMEKFKQT 159 (247)
T ss_dssp CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHH--H--HHHHHHHHHHHTCCHHHHHHHHHHHTTS
T ss_pred CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHH--H--HHHHHHhhcccccchHHHHhhhhcccCC
Confidence 68999999999999999999988 8888765432210 000000 0 0000000 00 000000000
Q ss_pred C--ChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 738 P--SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 738 ~--~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
+ .......+. .+....+.++++|+|++||++|..+|++.+.++++.+++
T Consensus 160 ~~~~~~~~~~~~-~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~ 210 (247)
T 1tqh_A 160 PMKTLKALQELI-ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIES 210 (247)
T ss_dssp CCTTHHHHHHHH-HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCC
T ss_pred CHHHHHHHHHHH-HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCC
Confidence 0 001111111 122345778999999999999999999999999998875
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.56 E-value=4.2e-13 Score=142.38 Aligned_cols=261 Identities=11% Similarity=0.018 Sum_probs=154.2
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCC-CccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~-~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
...++|||||+++++....+ ..++.++ .+++..+.+.... ..++ .....+.|||||++|++.......
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~-- 105 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS---ESLVKIDLVTGETLGRIDLSTPEERV-----KSLFGAALSPDGKTLAIYESPVRL-- 105 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT---TEEEEEETTTCCEEEEEECCBTTEEE-----ECTTCEEECTTSSEEEEEEEEEEE--
T ss_pred ccceEEcCCCCEEEEEeCCC---CeEEEEECCCCCeEeeEEcCCccccc-----ccccceEECCCCCEEEEEeccccc--
Confidence 56789999999987766432 3466666 4566555555432 0000 012689999999998886432100
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (789)
.++|.. .....|+++|+++++.... ......+..++|+|||+. |
T Consensus 106 --------------------------~~~~~~----~~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l 149 (337)
T 1pby_B 106 --------------------------ELTHFE----VQPTRVALYDAETLSRRKA--FEAPRQITMLAWARDGSK----L 149 (337)
T ss_dssp --------------------------CSSCEE----ECCCEEEEEETTTTEEEEE--EECCSSCCCEEECTTSSC----E
T ss_pred --------------------------cccccc----ccCceEEEEECCCCcEEEE--EeCCCCcceeEECCCCCE----E
Confidence 000000 0236899999999876654 233345678899999998 7
Q ss_pred EEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCC
Q 003886 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (789)
Q Consensus 314 ~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~ 393 (789)
++.. ..|+++|+ .+++...............|+|||+.|++.....
T Consensus 150 ~~~~-----------------~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 195 (337)
T 1pby_B 150 YGLG-----------------RDLHVMDP-----------------EAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195 (337)
T ss_dssp EEES-----------------SSEEEEET-----------------TTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTT
T ss_pred EEeC-----------------CeEEEEEC-----------------CCCcEeeeeeccccCCCceeCCCccEEeeeccCC
Confidence 7762 15899998 5555433222222233558999999876554332
Q ss_pred CCC----------CC---CccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEE
Q 003886 394 SVD----------SG---AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 460 (789)
Q Consensus 394 ~~~----------~g---~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~ 460 (789)
... .+ +......|+++|+.+++...+ .+.. . ...+..+.|+|||++|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~-----~~~~---~----------~~~~~~~~~s~dg~~l~~ 257 (337)
T 1pby_B 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR-----EVRI---M----------DVFYFSTAVNPAKTRAFG 257 (337)
T ss_dssp TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE-----EEEE---C----------SSCEEEEEECTTSSEEEE
T ss_pred CceeeeeeccccccccccccccccceEEEeCCCCCceEe-----ecCC---C----------CCceeeEEECCCCCEEEE
Confidence 100 00 000112588899877554211 0000 0 011235689999998876
Q ss_pred EEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 461 SSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 461 ~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
. ...|+.+|+.+++...............++++|+.+++. .. ...|.++++.++
T Consensus 258 ~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~---~~~i~v~d~~~~ 311 (337)
T 1pby_B 258 A-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-GA---LGDLAAYDAETL 311 (337)
T ss_dssp E-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-SB---SSEEEEEETTTC
T ss_pred e-----CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE-cC---CCcEEEEECcCC
Confidence 6 357889999988876554433333456889999987765 22 356888887644
No 156
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.56 E-value=8.1e-15 Score=152.17 Aligned_cols=198 Identities=15% Similarity=0.150 Sum_probs=122.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHH---HHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
.|..+..+ +.|.+ .|+||++||++.......|.. ..+.+++.||+|+++|++++.++.. +... ..+
T Consensus 21 ~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~-~~~~---~~~ 89 (280)
T 1r88_A 21 MGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTN-WEQD---GSK 89 (280)
T ss_dssp TTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSB-CSSC---TTC
T ss_pred cCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCC-CCCC---CCC
Confidence 57788888 77863 389999999854333445543 3456778899999999987554421 1110 111
Q ss_pred cccHHH-H-HHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhc
Q 003886 649 SQDVND-V-LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 726 (789)
Q Consensus 649 ~~~~~D-~-~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~ 726 (789)
...+ + .+.+.++.++-.+|+++++|+|+||||++++.++.++|++|+++|+.+|..++........+... . ...
T Consensus 90 --~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~-~-~~~ 165 (280)
T 1r88_A 90 --QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAG-M-QQF 165 (280)
T ss_dssp --BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHH-H-HHH
T ss_pred --cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHHH-h-hhc
Confidence 2222 1 23444444433477889999999999999999999999999999999998764321100000000 0 000
Q ss_pred cCccccccCCCCChhhHHHHHhcCccccCCCC---CCCEEEEE----eCCCCC-------CChHHHHHHHHHCCC
Q 003886 727 GSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLL----GAQDLR-------VPVSNGLQVIYHIPF 787 (789)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~Lii~----G~~D~~-------vp~~~~~~l~~~l~~ 787 (789)
+......+.+.+ ....+.+.+|..++.++ ..|++|+| |++|.. |+.+++.+++++|++
T Consensus 166 ~~~~~~~~~g~~---~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~ 237 (280)
T 1r88_A 166 GGVDTNGMWGAP---QLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRS 237 (280)
T ss_dssp HCCCTHHHHCCG---GGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhcCCC---chhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHH
Confidence 000000001111 01234456676655554 57999999 999984 689999999998853
No 157
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.55 E-value=1.2e-14 Score=151.73 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=81.6
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....-+ +.+.|.||++||++++. ..|......+++.||.|+++|+|| +|.+.... .....
T Consensus 13 ~g~~l~~~~~g~-----~~~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~----~~~~~ 78 (293)
T 1mtz_A 13 NGIYIYYKLCKA-----PEEKAKLMTMHGGPGMS--HDYLLSLRDMTKEGITVLFYDQFG---CGRSEEPD----QSKFT 78 (293)
T ss_dssp TTEEEEEEEECC-----SSCSEEEEEECCTTTCC--SGGGGGGGGGGGGTEEEEEECCTT---STTSCCCC----GGGCS
T ss_pred CCEEEEEEEECC-----CCCCCeEEEEeCCCCcc--hhHHHHHHHHHhcCcEEEEecCCC---CccCCCCC----CCccc
Confidence 566665544322 12337899999976642 223333445567899999999998 55543211 11234
Q ss_pred HHHHHHHHHHHHHcCCC-CCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccch
Q 003886 652 VNDVLTAIDHVIDMGLA-NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL 708 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~-d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~ 708 (789)
++++.+.+..+++. + +.+++.|+|||+||.+++.+|.++|++++++|+.+|....
T Consensus 79 ~~~~~~dl~~~~~~--l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 134 (293)
T 1mtz_A 79 IDYGVEEAEALRSK--LFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV 134 (293)
T ss_dssp HHHHHHHHHHHHHH--HHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBH
T ss_pred HHHHHHHHHHHHHH--hcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccCh
Confidence 55555555555544 2 3468999999999999999999999999999999987653
No 158
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.55 E-value=1.7e-14 Score=147.96 Aligned_cols=185 Identities=17% Similarity=0.152 Sum_probs=111.0
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
+.|.||++||.+.+ ...|......|++ +||.|+++|+|| +|.+..... ...+++.+.+..+++.- .+
T Consensus 20 ~~~~vv~lhG~~~~--~~~~~~~~~~l~~~~g~~v~~~d~~G---~G~s~~~~~------~~~~~~~~~~~~~l~~~-~~ 87 (272)
T 3fsg_A 20 SGTPIIFLHGLSLD--KQSTCLFFEPLSNVGQYQRIYLDLPG---MGNSDPISP------STSDNVLETLIEAIEEI-IG 87 (272)
T ss_dssp CSSEEEEECCTTCC--HHHHHHHHTTSTTSTTSEEEEECCTT---STTCCCCSS------CSHHHHHHHHHHHHHHH-HT
T ss_pred CCCeEEEEeCCCCc--HHHHHHHHHHHhccCceEEEEecCCC---CCCCCCCCC------CCHHHHHHHHHHHHHHH-hC
Confidence 35789999997664 5567666667776 799999999998 554432211 34444444444444331 24
Q ss_pred CccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhcc----Ccccccc---CCCCChhh
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG----SKGKDSF---TESPSVED 742 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~ 742 (789)
.+++.|+|||+||.+++.++.++|++++++|+.+|.....................+. ......+ ........
T Consensus 88 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (272)
T 3fsg_A 88 ARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQA 167 (272)
T ss_dssp TCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHHH
T ss_pred CCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCch
Confidence 5789999999999999999999999999999999875332111100000000000000 0000000 00000000
Q ss_pred H-------------------HHHHhc-----CccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 743 L-------------------TRFHSK-----SPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 743 ~-------------------~~~~~~-----sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
. ..+... .+...+.++++|+|+++|++|..+|++.+.++.+.+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 236 (272)
T 3fsg_A 168 WHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNEN 236 (272)
T ss_dssp HHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCTT
T ss_pred hHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcCC
Confidence 0 001100 01113578899999999999999999999999988764
No 159
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.55 E-value=6.7e-14 Score=146.18 Aligned_cols=119 Identities=21% Similarity=0.306 Sum_probs=84.2
Q ss_pred CC-eeEEEEEEecCCCCCCCCCcEEEEEcCC-CCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCc
Q 003886 572 AQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGG-PHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (789)
Q Consensus 572 ~g-~~l~~~~~~P~~~~~~~~~P~vv~~HGg-~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~ 649 (789)
+| ..++....- .++.|.||++||. |+......|......|++. |.|+++|+|| +|.+.... . ..
T Consensus 21 ~g~~~l~y~~~G------~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~~---~-~~ 86 (291)
T 2wue_A 21 DGPLKLHYHEAG------VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPG---YGHSDKRA---E-HG 86 (291)
T ss_dssp SSEEEEEEEEEC------TTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTT---STTSCCCS---C-CS
T ss_pred CCcEEEEEEecC------CCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCC---CCCCCCCC---C-CC
Confidence 67 677654432 1234689999996 3333344666666777665 9999999998 66554211 1 12
Q ss_pred ccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
..++++.+.+..+++. ++.+++.|+|||+||.+++.+|.++|++++++|+.+|..
T Consensus 87 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 141 (291)
T 2wue_A 87 QFNRYAAMALKGLFDQ--LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGG 141 (291)
T ss_dssp SHHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSS
T ss_pred cCHHHHHHHHHHHHHH--hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCC
Confidence 3466666666666554 345789999999999999999999999999999998754
No 160
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.55 E-value=4.6e-14 Score=148.39 Aligned_cols=119 Identities=23% Similarity=0.223 Sum_probs=87.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
++..++.+..-+ ...|+||++||++.+ ...|......|++ ||.|+++|+||.+|. +... .....
T Consensus 53 ~~~~~~~~~~g~------~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-g~~vi~~D~~G~gG~--s~~~-----~~~~~ 116 (306)
T 2r11_A 53 RFGQTHVIASGP------EDAPPLVLLHGALFS--STMWYPNIADWSS-KYRTYAVDIIGDKNK--SIPE-----NVSGT 116 (306)
T ss_dssp TTEEEEEEEESC------TTSCEEEEECCTTTC--GGGGTTTHHHHHH-HSEEEEECCTTSSSS--CEEC-----SCCCC
T ss_pred CCceEEEEeeCC------CCCCeEEEECCCCCC--HHHHHHHHHHHhc-CCEEEEecCCCCCCC--CCCC-----CCCCC
Confidence 455666555332 246899999998764 4557667778877 999999999985333 2211 11234
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccch
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL 708 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~ 708 (789)
.+++.+.+..+++. ++.+++.|+|||+||++++.++.++|++++++|+.+|....
T Consensus 117 ~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 171 (306)
T 2r11_A 117 RTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETF 171 (306)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBT
T ss_pred HHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCcccc
Confidence 66767666666665 45578999999999999999999999999999999997653
No 161
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.55 E-value=2.6e-14 Score=151.92 Aligned_cols=116 Identities=17% Similarity=0.257 Sum_probs=92.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHH-HCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHH
Q 003886 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (789)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la-~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~ 653 (789)
+.++++.|.+ ++.|+||++|||++.. ....|......|+ +.||.|+++||||+++... ...++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~-----------~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI-----------DDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCH-----------HHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCc-----------hHHHH
Confidence 5667788862 5679999999987532 3445666667776 5699999999998654221 23478
Q ss_pred HHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCc----eeEEEEeCCccch
Q 003886 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNL 708 (789)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~----~~a~v~~~pv~~~ 708 (789)
|+.+++++++++ ++.++|+|+|||+||++++.++.++|++ ++++|+.+|+.+.
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~ 205 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDA 205 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECccccc
Confidence 999999999988 7889999999999999999999887766 9999999998765
No 162
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.55 E-value=1.4e-13 Score=144.18 Aligned_cols=118 Identities=18% Similarity=0.191 Sum_probs=86.6
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHH
Q 003886 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (789)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~ 653 (789)
..++....-|. ...|.||++||.+.+ ...|......|++.||.|+++|+|| +|.+.... ......++
T Consensus 33 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~~~---~~~~~~~~ 99 (297)
T 2xt0_A 33 LRMHYVDEGPR-----DAEHTFLCLHGEPSW--SFLYRKMLPVFTAAGGRVVAPDLFG---FGRSDKPT---DDAVYTFG 99 (297)
T ss_dssp CCEEEEEESCT-----TCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCEES---CGGGCCHH
T ss_pred eEEEEEEccCC-----CCCCeEEEECCCCCc--ceeHHHHHHHHHhCCcEEEEeCCCC---CCCCCCCC---CcccCCHH
Confidence 67776554331 114789999997764 5677777889999999999999998 66654221 11123455
Q ss_pred HHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++..
T Consensus 100 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~ 150 (297)
T 2xt0_A 100 FHRRSLLAFLDA--LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL 150 (297)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCC
T ss_pred HHHHHHHHHHHH--hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCC
Confidence 665555555554 345789999999999999999999999999999998743
No 163
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.55 E-value=1.1e-14 Score=153.77 Aligned_cols=124 Identities=22% Similarity=0.239 Sum_probs=95.2
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CchhhHHHHHHHH-HCCcEEEEEcCCCCCCCCchhhccCCC
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPG 645 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la-~~Gy~V~~~d~rGs~G~G~~~~~~~~~ 645 (789)
+...+| .+.+.+| +. .++.|+||++|||++.. ....|......|+ +.||.|+++||||.+.+.
T Consensus 61 i~~~~g-~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~--------- 125 (311)
T 1jji_A 61 IKGRNG-DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK--------- 125 (311)
T ss_dssp EEETTE-EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC---------
T ss_pred ecCCCC-cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCC---------
Confidence 344455 7888888 42 45789999999987422 2346667778888 689999999999854321
Q ss_pred CCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhCCCc----eeEEEEeCCccch
Q 003886 646 KVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNL 708 (789)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~p~~----~~a~v~~~pv~~~ 708 (789)
.....+|+.++++++.+.. .+|+++|+|+|||+||++++.++.+++++ ++++|+.+|+.+.
T Consensus 126 --~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (311)
T 1jji_A 126 --FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp --TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred --CCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCC
Confidence 1234788999999988752 36778999999999999999999877665 9999999998875
No 164
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.55 E-value=6.9e-14 Score=146.31 Aligned_cols=180 Identities=12% Similarity=0.000 Sum_probs=115.7
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc-----hhhHHHHHHHHHCC----cEEEEEcCCCCCCCCc
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-----SSYSKSLAFLSSVG----YSLLIVNYRGSLGFGE 637 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-----~~~~~~~~~la~~G----y~V~~~d~rGs~G~G~ 637 (789)
.+.+.++ .+.++++.|+++++.+++|+||++||+++.... ..+......|+++| |+|+++|++|+.+.+.
T Consensus 45 ~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~ 123 (297)
T 1gkl_A 45 TYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQ 123 (297)
T ss_dssp EEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTT
T ss_pred EEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchH
Confidence 4455555 899999999988777899999999998764321 11234556777764 9999999987433222
Q ss_pred hhhccCCCCCCcccHHHHHHHHHHHHHcCC------------CCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 638 EALQSLPGKVGSQDVNDVLTAIDHVIDMGL------------ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 638 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~------------~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
.+ .....+| .+.++.++.. .|+++++|+|+|+||++++.++.++|++|+++++.+|.
T Consensus 124 ~~--------~~~~~~~---l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~ 192 (297)
T 1gkl_A 124 NF--------YQEFRQN---VIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 192 (297)
T ss_dssp TH--------HHHHHHT---HHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred HH--------HHHHHHH---HHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccc
Confidence 11 1111233 3444444321 36788999999999999999999999999999999997
Q ss_pred cchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 706 CNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
..+... .. . .......+... ..+.....++++.+|++|.. ..++.+++++|
T Consensus 193 ~~~~~~---------~~-~--------------~~~~~~~~~~~---~~~~~~~~~l~~~~G~~D~~--~~~~~~l~~~L 243 (297)
T 1gkl_A 193 YWYGNS---------PQ-D--------------KANSIAEAINR---SGLSKREYFVFAATGSEDIA--YANMNPQIEAM 243 (297)
T ss_dssp CCBSSS---------HH-H--------------HHHHHHHHHHH---HTCCTTSCEEEEEEETTCTT--HHHHHHHHHHH
T ss_pred cccCCc---------cc-h--------------hhhHHHHHHhh---ccCCcCcEEEEEEeCCCccc--chhHHHHHHHH
Confidence 532100 00 0 00111111111 12333445677789999976 45788888887
Q ss_pred CC
Q 003886 786 PF 787 (789)
Q Consensus 786 ~~ 787 (789)
++
T Consensus 244 ~~ 245 (297)
T 1gkl_A 244 KA 245 (297)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 165
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.54 E-value=6.5e-14 Score=155.91 Aligned_cols=121 Identities=19% Similarity=0.233 Sum_probs=87.0
Q ss_pred eeecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCC
Q 003886 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (789)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~ 646 (789)
.+.+.+|..++.... +..|+||++||++.+ ...|......|+++||.|+++|+|| +|.+...
T Consensus 7 ~~~~~dG~~l~y~~~--------G~gp~VV~lHG~~~~--~~~~~~l~~~La~~Gy~Vi~~D~rG---~G~S~~~----- 68 (456)
T 3vdx_A 7 GQENSTSIDLYYEDH--------GTGVPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRG---FGQSSQP----- 68 (456)
T ss_dssp EEETTEEEEEEEEEE--------SSSEEEEEECCTTCC--GGGGTTHHHHHHHHTEEEEEECCTT---STTSCCC-----
T ss_pred cccccCCeEEEEEEe--------CCCCEEEEECCCCCc--HHHHHHHHHHHHHCCcEEEEECCCC---CCCCCCC-----
Confidence 345567777763322 145899999998764 4567777889999999999999998 4544321
Q ss_pred CCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-CCceeEEEEeCCccc
Q 003886 647 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCN 707 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-p~~~~a~v~~~pv~~ 707 (789)
.....+++..+.+..+++. ++.++++|+|||+||++++.+++++ |++++++|+.+|...
T Consensus 69 ~~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~ 128 (456)
T 3vdx_A 69 TTGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEP 128 (456)
T ss_dssp SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCS
T ss_pred CCCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccc
Confidence 1123455555555544444 3567899999999999888888876 899999999998764
No 166
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.54 E-value=3.3e-12 Score=135.32 Aligned_cols=266 Identities=11% Similarity=0.057 Sum_probs=162.9
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (789)
++|||+.++... ...+.++++..... ...+...........+...+|+|||++|+.....+ .+.
T Consensus 59 ~~~~~~~l~~~~----------dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~ 122 (337)
T 1gxr_A 59 ISNPTRHVYTGG----------KGCVKVWDISHPGN-KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS-----TLS 122 (337)
T ss_dssp ECSSSSEEEEEC----------BSEEEEEETTSTTC-CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-----EEE
T ss_pred EecCCcEEEEcC----------CCeEEEEECCCCCc-eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCC-----cEE
Confidence 468998887642 23566666643322 11111100000114578899999999999876543 455
Q ss_pred Ee--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeC
Q 003886 184 LW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 261 (789)
Q Consensus 184 i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (789)
+| ..++........ ...+.+ ..+.|+||++.|+....+
T Consensus 123 ~~d~~~~~~~~~~~~~-~~~~~i------~~~~~~~~~~~l~~~~~d--------------------------------- 162 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELT-SSAPAC------YALAISPDSKVCFSCCSD--------------------------------- 162 (337)
T ss_dssp EEECCCC--EEEEEEE-CSSSCE------EEEEECTTSSEEEEEETT---------------------------------
T ss_pred EEECCCCCcceeeecc-cCCCce------EEEEECCCCCEEEEEeCC---------------------------------
Confidence 55 233322222221 111122 689999999988876432
Q ss_pred CcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEe
Q 003886 262 DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVR 341 (789)
Q Consensus 262 d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d 341 (789)
..|.+||+.+++..... ......+..+.|+|||+. |+..+ ....|+++|
T Consensus 163 -----------g~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~---------------~dg~i~~~d 211 (337)
T 1gxr_A 163 -----------GNIAVWDLHNQTLVRQF-QGHTDGASCIDISNDGTK----LWTGG---------------LDNTVRSWD 211 (337)
T ss_dssp -----------SCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEE
T ss_pred -----------CcEEEEeCCCCceeeee-ecccCceEEEEECCCCCE----EEEEe---------------cCCcEEEEE
Confidence 46889999888765442 223446788999999987 77655 234688889
Q ss_pred cccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCccc
Q 003886 342 VSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 421 (789)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~ 421 (789)
+ .+++..........+...+|||||+.|+..+.+. .|++||+.++....+..
T Consensus 212 ~-----------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-----------~i~~~~~~~~~~~~~~~ 263 (337)
T 1gxr_A 212 L-----------------REGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS-----------NVEVLHVNKPDKYQLHL 263 (337)
T ss_dssp T-----------------TTTEEEEEEECSSCEEEEEECTTSSEEEEEETTS-----------CEEEEETTSSCEEEECC
T ss_pred C-----------------CCCceEeeecCCCceEEEEECCCCCEEEEEcCCC-----------cEEEEECCCCCeEEEcC
Confidence 8 4444443334455678899999999998777543 58999987754321110
Q ss_pred ceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCE
Q 003886 422 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDN 501 (789)
Q Consensus 422 ~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~ 501 (789)
. ...+..+.|+|||+.|+ ++..++ .|..+|+.+++...............++++++.
T Consensus 264 ~--------------------~~~v~~~~~~~~~~~l~-~~~~dg--~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 320 (337)
T 1gxr_A 264 H--------------------ESCVLSLKFAYCGKWFV-STGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISVDDKY 320 (337)
T ss_dssp C--------------------SSCEEEEEECTTSSEEE-EEETTS--EEEEEETTTCCEEEEEECSSCEEEEEECTTSCE
T ss_pred C--------------------ccceeEEEECCCCCEEE-EecCCC--cEEEEECCCCeEEEEecCCCcEEEEEECCCCCE
Confidence 0 01244678999999664 444455 455567778877655444444555678888887
Q ss_pred EEEEEe
Q 003886 502 IIAVSS 507 (789)
Q Consensus 502 l~~~~s 507 (789)
|+....
T Consensus 321 l~~~~~ 326 (337)
T 1gxr_A 321 IVTGSG 326 (337)
T ss_dssp EEEEET
T ss_pred EEEecC
Confidence 665543
No 167
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.54 E-value=4.5e-15 Score=153.68 Aligned_cols=185 Identities=15% Similarity=0.140 Sum_probs=120.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHH-HHCC---cEEEEEcCCCCCCCCc-----hhhcc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFL-SSVG---YSLLIVNYRGSLGFGE-----EALQS 642 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~l-a~~G---y~V~~~d~rGs~G~G~-----~~~~~ 642 (789)
.|.++..+++.|+++++.+++|+|+++||++.......+......+ ++.| ++|+.+|++++..++. ++...
T Consensus 28 ~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~ 107 (275)
T 2qm0_A 28 EGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPS 107 (275)
T ss_dssp TCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSS
T ss_pred CCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCC
Confidence 6788999999999887778999999999965311111222222222 3567 9999999987543321 11100
Q ss_pred C-----C--------CCCC-cccHHHHH--HHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 643 L-----P--------GKVG-SQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 643 ~-----~--------~~~~-~~~~~D~~--~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
. + ...+ ...+.+.+ +.+.++.++..+|+++++|+|||+||++++.++.++|++|+++++.+|..
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 108 VISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred CccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 0 0 0111 11233322 34455555545788999999999999999999999999999999999986
Q ss_pred chhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 707 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
.+.... +.. ..+.+.... ......+|++|+||+.|..++..++.+++++|
T Consensus 188 ~~~~~~-------------~~~-------------~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L 237 (275)
T 2qm0_A 188 WWNNKS-------------VLE-------------KEENLIIEL---NNAKFETGVFLTVGSLEREHMVVGANELSERL 237 (275)
T ss_dssp THHHHG-------------GGG-------------GTTHHHHHH---HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHH
T ss_pred eeChHH-------------HHH-------------HHHHHHhhh---cccCCCceEEEEeCCcccchhhHHHHHHHHHH
Confidence 432110 000 000111100 13455689999999999999999999999998
No 168
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.54 E-value=3e-14 Score=146.01 Aligned_cols=148 Identities=16% Similarity=0.133 Sum_probs=110.3
Q ss_pred EEEEecCCCCC-CCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHH
Q 003886 578 AIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 656 (789)
Q Consensus 578 ~~~~~P~~~~~-~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~ 656 (789)
+.++.|..... +++.|+||++||++++ ...|......|+++||.|+++|+||+. ...|+.
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~~~~~~ 94 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAG--PSTYAGLLSHWASHGFVVAAAETSNAG-----------------TGREML 94 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCC--GGGGHHHHHHHHHHTCEEEEECCSCCT-----------------TSHHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCC--chhHHHHHHHHHhCCeEEEEecCCCCc-----------------cHHHHH
Confidence 67788864211 3478999999997764 567777888999999999999999630 123555
Q ss_pred HHHHHHHHc---------CCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhcc
Q 003886 657 TAIDHVIDM---------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (789)
Q Consensus 657 ~~i~~l~~~---------~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~ 727 (789)
.+++++.+. ..+|.++++|+|||+||++++.++ .+++++++|+.+|....
T Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~------------------- 153 (258)
T 2fx5_A 95 ACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG------------------- 153 (258)
T ss_dssp HHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-------------------
T ss_pred HHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-------------------
Confidence 666666543 236778999999999999999887 35689999998774320
Q ss_pred CccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHH-HHHHHHHC
Q 003886 728 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQVIYHI 785 (789)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~-~~~l~~~l 785 (789)
.+. ....+.++++|+|++||++|..+|+.. +.++++..
T Consensus 154 ---------~~~-----------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 192 (258)
T 2fx5_A 154 ---------LGH-----------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA 192 (258)
T ss_dssp ---------TTC-----------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC
T ss_pred ---------ccc-----------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc
Confidence 000 012456788999999999999999986 88888874
No 169
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.54 E-value=4.1e-14 Score=147.25 Aligned_cols=184 Identities=16% Similarity=0.222 Sum_probs=115.4
Q ss_pred CCcEEEEEcCCCCCCCchhhH-HHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~-~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
+.|+||++||.+.+ ...|. .....|+++||.|+++|+|| +|.+... .....+++.+.+..+++. ++
T Consensus 42 ~~~~vv~lHG~~~~--~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~s~~~------~~~~~~~~~~~~~~~l~~--l~ 108 (293)
T 3hss_A 42 TGDPVVFIAGRGGA--GRTWHPHQVPAFLAAGYRCITFDNRG---IGATENA------EGFTTQTMVADTAALIET--LD 108 (293)
T ss_dssp SSEEEEEECCTTCC--GGGGTTTTHHHHHHTTEEEEEECCTT---SGGGTTC------CSCCHHHHHHHHHHHHHH--HT
T ss_pred CCCEEEEECCCCCc--hhhcchhhhhhHhhcCCeEEEEccCC---CCCCCCc------ccCCHHHHHHHHHHHHHh--cC
Confidence 45889999997764 45565 46778889999999999998 4554321 123456666666655554 34
Q ss_pred CccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhc------------CCCCC-cchhhhh-ccCccccccC
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------------TTDIP-DWCYVES-YGSKGKDSFT 735 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~------------~~~~~-~~~~~~~-~~~~~~~~~~ 735 (789)
.+++.|+|||+||.+++.++.++|++++++|+.+|......... ....+ .+..... ........+.
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (293)
T 3hss_A 109 IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLN 188 (293)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHT
T ss_pred CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccccc
Confidence 57899999999999999999999999999999998754311100 00000 0000000 0000000000
Q ss_pred ---------------CCCChhhHHHHH----hcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 736 ---------------ESPSVEDLTRFH----SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 736 ---------------~~~~~~~~~~~~----~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
............ ..+....+.++++|+|+++|++|..+|++.+.++.+.+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~ 259 (293)
T 3hss_A 189 DDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPN 259 (293)
T ss_dssp CHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTT
T ss_pred ccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC
Confidence 000000000000 1122334678999999999999999999999999998865
No 170
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.54 E-value=3.2e-13 Score=139.63 Aligned_cols=119 Identities=14% Similarity=0.170 Sum_probs=89.5
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc-hhh-HHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSY-SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~-~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
.+|.++ .+|.|. . ++.|+||++|||++.... ..+ ......+++.||.|+++|||+.+.+ .+
T Consensus 12 ~~~~~~--~~y~p~---~-~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~--~~--------- 74 (274)
T 2qru_A 12 ANGATV--TIYPTT---T-EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT--KI--------- 74 (274)
T ss_dssp TTSCEE--EEECCS---S-SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS--CH---------
T ss_pred cCCeeE--EEEcCC---C-CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC--CC---------
Confidence 355555 467775 2 568999999999864332 233 3455677888999999999985432 11
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHH---hCCCceeEEEEeCCccc
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLCN 707 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~---~~p~~~~a~v~~~pv~~ 707 (789)
...++|+.++++|+.++.. +.++|+|+|+|+||.+++.++. ..+.+++++++.+|..+
T Consensus 75 p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~ 135 (274)
T 2qru_A 75 DHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTD 135 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSC
T ss_pred cHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccc
Confidence 2348999999999998742 2789999999999999999887 35678999999988877
No 171
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.54 E-value=2.5e-12 Score=137.59 Aligned_cols=240 Identities=12% Similarity=0.045 Sum_probs=151.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEec-CCCccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~-~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
.++...+||||+ +|+..+..+ .+.+| ..++....... ..+..+.| ..++|||||++|+..+.+
T Consensus 83 ~~v~~~~~s~d~-~l~~~s~dg-----~v~lWd~~~~~~~~~~~~~~~~H~~~V------~~v~~spdg~~l~sgs~d-- 148 (344)
T 4gqb_B 83 AGVADLTWVGER-GILVASDSG-----AVELWELDENETLIVSKFCKYEHDDIV------STVSVLSSGTQAVSGSKD-- 148 (344)
T ss_dssp SCEEEEEEETTT-EEEEEETTS-----EEEEEEECTTSSCEEEEEEEECCSSCE------EEEEECTTSSEEEEEETT--
T ss_pred CCEEEEEEeCCC-eEEEEECCC-----EEEEEeccCCCceeEeeccccCCCCCE------EEEEECCCCCEEEEEeCC--
Confidence 358889999996 555554433 45666 33443333322 12222334 789999999999876543
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCc
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
..|.+||+.+++..... ......+..+.|+||++.
T Consensus 149 ------------------------------------------~~i~iwd~~~~~~~~~~-~~h~~~V~~~~~~~~~~~-- 183 (344)
T 4gqb_B 149 ------------------------------------------ICIKVWDLAQQVVLSSY-RAHAAQVTCVAASPHKDS-- 183 (344)
T ss_dssp ------------------------------------------SCEEEEETTTTEEEEEE-CCCSSCEEEEEECSSCTT--
T ss_pred ------------------------------------------CeEEEEECCCCcEEEEE-cCcCCceEEEEecCCCCC--
Confidence 46889999998765441 223446788999999988
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCC--CCCccCcceecCCCCE-E
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE--SISSAFFPRFSPDGKF-L 386 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~--~~~~~~~p~~SpDG~~-l 386 (789)
++.++. .+..|.++|+ .+++ ...+.. ........+|+|++.. |
T Consensus 184 --~l~s~s--------------~D~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 184 --VFLSCS--------------EDNRILLWDT-----------------RCPKPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp --EEEEEE--------------TTSCEEEEET-----------------TSSSCEEECC----CCCEEEEEECSSCTTEE
T ss_pred --ceeeec--------------cccccccccc-----------------cccceeeeeecceeeccceeeeecCCCCcce
Confidence 766552 2236888888 3333 344432 2334667899997654 4
Q ss_pred EEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCC
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (789)
+..+.+ ..|.+||+.+++......+. ...+..+.|+|||..+++++..++
T Consensus 231 ~sg~~d-----------g~v~~wd~~~~~~~~~~~~h-------------------~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 231 VFGDEN-----------GTVSLVDTKSTSCVLSSAVH-------------------SQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp EEEETT-----------SEEEEEESCC--CCEEEECC-------------------SSCEEEEEECSSSSCCEEEEETTS
T ss_pred EEeccC-----------CcEEEEECCCCcEEEEEcCC-------------------CCCEEEEEEccCCCeEEEEEeCCC
Confidence 444433 25899999876543211111 113446789999987777877777
Q ss_pred eEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEee
Q 003886 467 SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (789)
Q Consensus 467 ~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~ 520 (789)
...|| |+.++++.++......+....|+|+++.++++++...+ |.+-++
T Consensus 281 ~i~vw--d~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~---v~~w~v 329 (344)
T 4gqb_B 281 SLAVL--DSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ---VVHHVV 329 (344)
T ss_dssp CEEEE--CTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSC---EEEEEC
T ss_pred eEEEE--ECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe---EEEEEC
Confidence 66665 88889887775544455566889999988888776554 444444
No 172
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.54 E-value=1.5e-13 Score=143.22 Aligned_cols=186 Identities=16% Similarity=0.249 Sum_probs=111.6
Q ss_pred cEEEEEcCCC-CCCCchhhHHHH-HHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 593 PLIVVLHGGP-HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 593 P~vv~~HGg~-~~~~~~~~~~~~-~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
|.||++||.+ +......|.... ..|++ +|.|+++|+|| +|.+.... .....++++.+.+..+++. ++.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G---~G~S~~~~----~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPG---WGKSDSVV----NSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTT---STTSCCCC----CSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCC---CCCCCCCC----ccccCHHHHHHHHHHHHHH--hCC
Confidence 4899999964 222234555555 56665 49999999998 55543211 1134567777777766665 455
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCC------------CCcchhhhhccCccccccCCCC
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYVESYGSKGKDSFTESP 738 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 738 (789)
+++.|+|||+||.+++.++.++|++++++|+.+|............ .+.+.....+............
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 7899999999999999999999999999999987542100000000 0000000000000000000000
Q ss_pred -------------ChhhHHHHH---------hcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCCC
Q 003886 739 -------------SVEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPFS 788 (789)
Q Consensus 739 -------------~~~~~~~~~---------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~~ 788 (789)
.......+. ..+....+.++++|+|+++|++|..+|++.+.++.+.+++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 258 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGS 258 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCCc
Confidence 000001010 01122356789999999999999999999999999988653
No 173
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.54 E-value=4.6e-13 Score=139.46 Aligned_cols=260 Identities=10% Similarity=0.076 Sum_probs=179.9
Q ss_pred CCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC---------
Q 003886 106 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--------- 176 (789)
Q Consensus 106 pdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--------- 176 (789)
.||.+|.|+... ....|+.++. ++.+.++|+... +--++|+|++|+|+....+
T Consensus 23 ~~g~~iy~~n~~-------d~~~ly~~~~--dg~~~~~l~~~~---------~~~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 23 ESDGEVFFSNTN-------DNGRLYAMNI--DGSNIHKLSNDT---------AMYINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp EETTEEEEEEGG-------GTTEEEEEET--TSCSCEEEEEEE---------EEEEEECSSEEEEEEECC------CCSS
T ss_pred EeCCEEEEEeCC-------CCceEEEEcC--CCCCCEEccCCc---------eeeEEEcCCEEEEEECCCCcccccceec
Confidence 688899887432 1347888764 555667775432 3457899999999987642
Q ss_pred -CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCC
Q 003886 177 -ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 254 (789)
Q Consensus 177 -~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (789)
....|+.+. ++++..++... .+..|+|+|++|+|+.....
T Consensus 85 ~n~~~Iy~i~~dg~~~~~l~~~--------------~~~~~s~~g~~Iy~~~~~~~------------------------ 126 (302)
T 3s25_A 85 YDRNSLCRIKRNGHGSTVLDPD--------------PCIYASLIGNYIYYLHYDTQ------------------------ 126 (302)
T ss_dssp CCSEEEEEEETTSCCCEEEECS--------------CEEEEEEETTEEEEEEESSS------------------------
T ss_pred cCCCeEEEEeCCCCcceEeecC--------------CccEEEEeCCEEEEEeecCC------------------------
Confidence 134678888 44444444331 24579999999999852110
Q ss_pred CcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCC
Q 003886 255 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRP 334 (789)
Q Consensus 255 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~ 334 (789)
....|+++++++...++|+ .... ..|+|+|+. |+|+.. ..
T Consensus 127 ----------------~~~~Iy~~~~dGs~~~~lt--~~~~----~~~~~~g~~----iy~t~~--------------g~ 166 (302)
T 3s25_A 127 ----------------TATSLYRIRIDGEEKKKIK--NHYL----FTCNTSDRY----FYYNNP--------------KN 166 (302)
T ss_dssp ----------------SCEEEEEEETTSCCCEEEE--SSCC----CCSEEETTE----EEEECT--------------TT
T ss_pred ----------------CCceEEEEECCCCCeEEEe--CCCc----eEeeEECCE----EEEEeC--------------CC
Confidence 3478999999988888883 3322 356899999 999873 12
Q ss_pred cceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 335 CALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 335 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
..||++++ +++..++|..+.. ..| ++|+|++|+|+.... ..+|++++++++
T Consensus 167 ~~Iy~~~l-----------------~g~~~~~l~~~~~--~~~-~~P~g~~iy~t~~~~---------~~~I~~~~ldG~ 217 (302)
T 3s25_A 167 GQLYRYDT-----------------ASQSEALFYDCNC--YKP-VVLDDTNVYYMDVNR---------DNAIVHVNINNP 217 (302)
T ss_dssp CCEEEEET-----------------TTTEEEEEECSCE--EEE-EEEETTEEEEEEGGG---------TTEEEEECSSSC
T ss_pred ceEEEEEC-----------------CCCCEEEEeCCCc--cce-eeecCCEEEEEEcCC---------CcEEEEEECCCC
Confidence 37999998 6777777765422 345 569999999987543 257999999987
Q ss_pred CCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEE
Q 003886 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSL 494 (789)
Q Consensus 415 ~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~ 494 (789)
..+.++... .+.|+|+|+.|||..... ...|+++++++...++|+... ...
T Consensus 218 ~~~~Lt~~~------------------------~~~~~~~g~~Iy~~~~~~-~~~i~~~~~DG~~r~~l~~~~----~~~ 268 (302)
T 3s25_A 218 NPVVLTEAN------------------------IEHYNVYGSLIFYQRGGD-NPALCVVKNDGTGFKELAKGE----FCN 268 (302)
T ss_dssp CCEECSCSC------------------------EEEEEEETTEEEEEECSS-SCEEEEEETTSCCCEEEEESC----EEE
T ss_pred CeEEEeCCC------------------------cceEEECCCEEEEEECCC-CcEEEEEECCCCccEEeeCCc----cce
Confidence 766554321 124789999998875443 378999999888888887653 236
Q ss_pred eeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 495 LTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 495 ~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
+++.+++|+++...... |++..+..
T Consensus 269 i~i~~d~Iy~td~~~~~---i~~~~~dG 293 (302)
T 3s25_A 269 INVTSQYVYFTDFVSNK---EYCTSTQN 293 (302)
T ss_dssp EEECSSEEEEEETTTCC---EEEEESSS
T ss_pred EEEeCCEEEEEECCCCe---EEEEECCC
Confidence 78899999998754432 77776543
No 174
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.54 E-value=1.9e-14 Score=151.38 Aligned_cols=204 Identities=13% Similarity=0.117 Sum_probs=124.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHH---HHHHHHCCcEEEEEcCCCCCCCCchhhcc-CCCCC
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNYRGSLGFGEEALQS-LPGKV 647 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~---~~~la~~Gy~V~~~d~rGs~G~G~~~~~~-~~~~~ 647 (789)
.+..+..+ +.|. .+++|+||++||++.......|... .+.+++.||.|+++|++++.+|....... ..+..
T Consensus 19 ~~~~i~v~-~~p~----~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~ 93 (304)
T 1sfr_A 19 MGRDIKVQ-FQSG----GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGC 93 (304)
T ss_dssp TTEEEEEE-EECC----STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEE
T ss_pred CCCceEEE-ECCC----CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCcccccccc
Confidence 35667766 4453 2679999999998543334455443 35677889999999998765443211000 00000
Q ss_pred CcccHHHH--HHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcch-h-h
Q 003886 648 GSQDVNDV--LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC-Y-V 723 (789)
Q Consensus 648 ~~~~~~D~--~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~-~-~ 723 (789)
+....++. .+.+.++.++-.++.++++|+|+||||++++.++.++|++|+++|+.+|..++..... .... . .
T Consensus 94 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~----~~~~~~~~ 169 (304)
T 1sfr_A 94 QTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMG----PTLIGLAM 169 (304)
T ss_dssp ECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTH----HHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccch----hhhhhHhh
Confidence 12233333 2344444443336778999999999999999999999999999999999876432100 0000 0 0
Q ss_pred hhccCccccccCCCCChhhHHHHHhcCccccCCCC---CCCEEEEEeCCCC--------------CCChHHHHHHHHHCC
Q 003886 724 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQVIYHIP 786 (789)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~Lii~G~~D~--------------~vp~~~~~~l~~~l~ 786 (789)
...+....+.+.+.+. ...+...+|...+.++ ++|++|+||++|. .++..++.+++++|+
T Consensus 170 ~~~~~~~~~~~~g~~~---~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~ 246 (304)
T 1sfr_A 170 GDAGGYKASDMWGPKE---DPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYN 246 (304)
T ss_dssp HHTTSCCHHHHHCSTT---STHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccchHHhcCCcc---hhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHHHHHHHHH
Confidence 0000000000011111 1245666776655554 5899999999998 678899999999886
Q ss_pred C
Q 003886 787 F 787 (789)
Q Consensus 787 ~ 787 (789)
+
T Consensus 247 ~ 247 (304)
T 1sfr_A 247 A 247 (304)
T ss_dssp H
T ss_pred h
Confidence 4
No 175
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.54 E-value=9.8e-14 Score=149.62 Aligned_cols=130 Identities=14% Similarity=0.158 Sum_probs=88.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-----------hhHHHHH---HHHHCCcEEEEEcCCCCCCCCc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------SYSKSLA---FLSSVGYSLLIVNYRGSLGFGE 637 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-----------~~~~~~~---~la~~Gy~V~~~d~rGs~G~G~ 637 (789)
+|..++....-+. ...+.|+||++||.+.+.... .|...+. .|+++||.|+++|+||. ++|.
T Consensus 29 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~-~~G~ 104 (366)
T 2pl5_A 29 SPVVIAYETYGTL---SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGG-CKGS 104 (366)
T ss_dssp SSEEEEEEEEECC---CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTC-SSSS
T ss_pred cCceeeEEeccCc---CCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCc-ccCC
Confidence 4566666555443 223468999999987764311 3444332 45578999999999983 1232
Q ss_pred hhhccCCCC--------CCcccHHHHHHHHHHHHHcCCCCCccE-EEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 638 EALQSLPGK--------VGSQDVNDVLTAIDHVIDMGLANPSKV-TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 638 ~~~~~~~~~--------~~~~~~~D~~~~i~~l~~~~~~d~~rv-~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
+........ .....++++.+.+..+++. ++.+++ .|+|||+||.+++.++.++|++++++|+.+|...
T Consensus 105 s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 181 (366)
T 2pl5_A 105 SGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAE 181 (366)
T ss_dssp SSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSB
T ss_pred CCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCcc
Confidence 221110000 0124577877777777776 456788 8999999999999999999999999999998754
No 176
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.53 E-value=3.2e-12 Score=136.62 Aligned_cols=249 Identities=12% Similarity=0.120 Sum_probs=157.2
Q ss_pred ccEEEEeCCCCCeEEEEecCCC---CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPEN---ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~---~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
+...++|||||++|++...... ....++.++ .+++..+.+...... ..+.|+|||++|++....
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~-- 109 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKP----------FGATINNTTQTLWFGNTV-- 109 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCC----------CSEEEETTTTEEEEEETT--
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCc----------ceEEECCCCCEEEEEecC--
Confidence 3567899999999977664321 133566666 566666666654444 689999999987765332
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC--------CccceEEE
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS--------LSVGQVVW 302 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~--------~~~~~~~w 302 (789)
...|+++|+++++.......... .....++|
T Consensus 110 -----------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (353)
T 3vgz_A 110 -----------------------------------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA 148 (353)
T ss_dssp -----------------------------------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE
T ss_pred -----------------------------------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE
Confidence 25799999998886443111111 12467899
Q ss_pred eeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCee-ecCCCCCccCcceecC
Q 003886 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTESISSAFFPRFSP 381 (789)
Q Consensus 303 SPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~~~~~~~~p~~Sp 381 (789)
+|||+. +++.... ....|+++|+ ++++.. .+...........|||
T Consensus 149 s~dg~~----l~~~~~~-------------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 149 DDATNT----VYISGIG-------------KESVIWVVDG-----------------GNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp ETTTTE----EEEEEES-------------SSCEEEEEET-----------------TTTEEEEEECCCCTTCCCCEEET
T ss_pred CCCCCE----EEEEecC-------------CCceEEEEcC-----------------CCCceEEEecCCCCccceEEECC
Confidence 999997 6665522 1236999998 555544 3432334467889999
Q ss_pred CCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEE
Q 003886 382 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 461 (789)
Q Consensus 382 DG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~ 461 (789)
||++|++.... ..|+++|..+++... ... ...... . .....+.|+|||+.+|+.
T Consensus 195 dg~~l~~~~~~-----------~~i~~~d~~~~~~~~-------~~~---~~~~~~-~----~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 195 EGKRLYTTNAD-----------GELITIDTADNKILS-------RKK---LLDDGK-E----HFFINISLDTARQRAFIT 248 (353)
T ss_dssp TTTEEEEECTT-----------SEEEEEETTTTEEEE-------EEE---CCCSSS-C----CCEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCeEEE-------EEE---cCCCCC-C----cccceEEECCCCCEEEEE
Confidence 99998776532 368999987754321 111 000000 0 012246899999988776
Q ss_pred EEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 462 SIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 462 ~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
.. +...|+.+|+.+++.......... ....++++|+.++++.... ..+.+++..+
T Consensus 249 ~~--~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~ 303 (353)
T 3vgz_A 249 DS--KAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQA---GKVSVIDAKS 303 (353)
T ss_dssp ES--SSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTT---TEEEEEETTT
T ss_pred eC--CCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCC---CeEEEEECCC
Confidence 43 335688889988887654433322 3468899999877766443 3477777653
No 177
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.53 E-value=6.9e-14 Score=144.81 Aligned_cols=102 Identities=21% Similarity=0.286 Sum_probs=77.4
Q ss_pred cEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCcc
Q 003886 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (789)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (789)
|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+.... ....++++.+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~~-----~~~~~~~~~~dl~~~l~~--l~~~~ 91 (279)
T 1hkh_A 24 QPVVLIHGYPLD--GHSWERQTRELLAQGYRVITYDRRG---FGGSSKVN-----TGYDYDTFAADLHTVLET--LDLRD 91 (279)
T ss_dssp EEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTT---STTSCCCS-----SCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CcEEEEcCCCch--hhHHhhhHHHHHhCCcEEEEeCCCC---CCCCCCCC-----CCCCHHHHHHHHHHHHHh--cCCCc
Confidence 459999997664 5678888889999999999999998 55543211 123355555555555444 34578
Q ss_pred EEEEEcCccHHHHHHHHHhCCC-ceeEEEEeCCcc
Q 003886 673 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLC 706 (789)
Q Consensus 673 v~l~G~S~GG~~a~~~~~~~p~-~~~a~v~~~pv~ 706 (789)
+.|+|||+||.+++.++.++|+ +++++|+.++..
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~ 126 (279)
T 1hkh_A 92 VVLVGFSMGTGELARYVARYGHERVAKLAFLASLE 126 (279)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCC
T ss_pred eEEEEeChhHHHHHHHHHHcCccceeeEEEEccCC
Confidence 9999999999999999999998 999999998743
No 178
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.52 E-value=1.3e-13 Score=145.39 Aligned_cols=118 Identities=19% Similarity=0.247 Sum_probs=87.5
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHH
Q 003886 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (789)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~ 653 (789)
..++....-|. .+.|.||++||.+.+ ...|......|++.||.|+++|+|| +|.+.... ......++
T Consensus 34 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~~~---~~~~y~~~ 100 (310)
T 1b6g_A 34 LRAHYLDEGNS-----DAEDVFLCLHGEPTW--SYLYRKMIPVFAESGARVIAPDFFG---FGKSDKPV---DEEDYTFE 100 (310)
T ss_dssp CEEEEEEEECT-----TCSCEEEECCCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCEES---CGGGCCHH
T ss_pred eEEEEEEeCCC-----CCCCEEEEECCCCCc--hhhHHHHHHHHHhCCCeEEEeCCCC---CCCCCCCC---CcCCcCHH
Confidence 77776555432 114789999997764 5577777889999999999999998 66654321 11123466
Q ss_pred HHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++.+.+..+++. ++.+++.|+|||+||++++.+|.++|++++++|+.++..
T Consensus 101 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~ 151 (310)
T 1b6g_A 101 FHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXL 151 (310)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEecccc
Confidence 666655555554 345789999999999999999999999999999998743
No 179
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.52 E-value=1.4e-13 Score=146.49 Aligned_cols=126 Identities=18% Similarity=0.252 Sum_probs=84.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
+|..++....-+.+ .+.+.+.||++||++++ ...|......|++ .||.|+++|+|| +|.+.... .......
T Consensus 36 ~g~~l~y~~~G~~~--~~~~g~plvllHG~~~~--~~~w~~~~~~l~~~~~~~Via~D~rG---~G~S~~~~-~~~~~~~ 107 (330)
T 3nwo_A 36 GDHETWVQVTTPEN--AQPHALPLIVLHGGPGM--AHNYVANIAALADETGRTVIHYDQVG---CGNSTHLP-DAPADFW 107 (330)
T ss_dssp TTEEEEEEEECCSS--CCTTCCCEEEECCTTTC--CSGGGGGGGGHHHHHTCCEEEECCTT---STTSCCCT-TSCGGGC
T ss_pred cCcEEEEEEecCcc--CCCCCCcEEEECCCCCC--chhHHHHHHHhccccCcEEEEECCCC---CCCCCCCC-CCccccc
Confidence 67778777766531 11112358889998775 3456555666765 699999999998 55543210 0111122
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
..+++.+.+..+++. ++.+++.|+|||+||++++.+|.++|++++++|+.++...
T Consensus 108 ~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~ 162 (330)
T 3nwo_A 108 TPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPAS 162 (330)
T ss_dssp CHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSB
T ss_pred cHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcc
Confidence 344444444444443 2457899999999999999999999999999999887543
No 180
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.52 E-value=5.1e-13 Score=147.57 Aligned_cols=290 Identities=10% Similarity=-0.013 Sum_probs=174.1
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecC--CCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP--QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~--~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
+..++||| ++.+++....+ + .+...+ .+++..+.+... ....+.+ ..+.|+|||+.++....+...
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~-~--~i~~~d~~~g~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~s~~~d~~v- 193 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLED-E--GMDVLDINSGQTVRLSPPEKYKKKLGFV------ETISIPEHNELWVSQMQANAV- 193 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTS-S--SEEEEETTTCCEEEECCCHHHHTTCCEE------EEEEEGGGTEEEEEEGGGTEE-
T ss_pred ceEEEEeC-CCeEEEEeCCC-C--eEEEEECCCCeEeeecCcccccccCCce------eEEEEcCCCEEEEEECCCCEE-
Confidence 55788999 66666665432 1 244444 445554433321 1222223 689999999877665544322
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCc-cCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK-RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~-~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (789)
..|+............+........|.++....+... ....|++||+.+++.... ......+..++|+|||+.
T Consensus 194 -~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~g~~--- 267 (433)
T 3bws_A 194 -HVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK--TDKIGLPRGLLLSKDGKE--- 267 (433)
T ss_dssp -EEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE--CCCCSEEEEEEECTTSSE---
T ss_pred -EEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE--ecCCCCceEEEEcCCCCE---
Confidence 1233222221111222333344556788755554333 567899999999887665 444556788999999997
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEec
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~ 391 (789)
|++.+...... ...+..|+++|+ .+++.............++|+|||+.|++...
T Consensus 268 -l~~~~~~~~~~-------~~~dg~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 268 -LYIAQFSASNQ-------ESGGGRLGIYSM-----------------DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp -EEEEEEESCTT-------CSCCEEEEEEET-----------------TTTEEEEEEEEEECEEEEEECSSTTEEEEEET
T ss_pred -EEEEECCCCcc-------ccCCCeEEEEEC-----------------CCCcEEeeccCCCCcceEEECCCCCEEEEEec
Confidence 77766422110 012347899998 45554444333345677899999998877754
Q ss_pred CCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCe----
Q 003886 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS---- 467 (789)
Q Consensus 392 ~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~---- 467 (789)
.+ ..|++||+.+++... ... .. ..+..+.|+|||+.|++.....+.
T Consensus 323 ~~----------~~v~v~d~~~~~~~~-------~~~---~~----------~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 323 CC----------SKIEVYDLKEKKVQK-------SIP---VF----------DKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp TT----------TEEEEEETTTTEEEE-------EEE---CS----------SSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred CC----------CEEEEEECCCCcEEE-------Eec---CC----------CCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 43 369999987644321 111 00 123467899999988776654332
Q ss_pred --------EEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEee
Q 003886 468 --------QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (789)
Q Consensus 468 --------~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~ 520 (789)
..|+.+|+.+++...............++++|+.+++..+... .+.+.++
T Consensus 373 ~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~---~i~v~~~ 430 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDH---QIRVYRR 430 (433)
T ss_dssp TTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTT---EEEEEEE
T ss_pred cccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCC---eEEEEEe
Confidence 3799999999987766555444556688999998876654332 3555554
No 181
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.52 E-value=5.4e-14 Score=160.66 Aligned_cols=120 Identities=20% Similarity=0.324 Sum_probs=88.2
Q ss_pred ecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCC
Q 003886 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (789)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~ 648 (789)
+..+|..++....- +.|+||++||++++ ...|......|+++||.|+++|+|| +|.+... ....
T Consensus 243 ~~~dg~~l~~~~~g--------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~D~~G---~G~S~~~---~~~~ 306 (555)
T 3i28_A 243 TVKPRVRLHFVELG--------SGPAVCLCHGFPES--WYSWRYQIPALAQAGYRVLAMDMKG---YGESSAP---PEIE 306 (555)
T ss_dssp EEETTEEEEEEEEC--------SSSEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTSCCC---SCGG
T ss_pred EeCCCcEEEEEEcC--------CCCEEEEEeCCCCc--hhHHHHHHHHHHhCCCEEEEecCCC---CCCCCCC---CCcc
Confidence 33478777744331 45899999998764 5567778889999999999999998 5544321 1112
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
....+++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+.+|..
T Consensus 307 ~~~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 362 (555)
T 3i28_A 307 EYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 362 (555)
T ss_dssp GGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cccHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCC
Confidence 33355555555555554 355789999999999999999999999999999988753
No 182
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.52 E-value=1.5e-13 Score=138.71 Aligned_cols=160 Identities=14% Similarity=0.085 Sum_probs=107.6
Q ss_pred CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHC-----CcEEEEEcCCCC------CCCCchhhccC----CCCCCcccH
Q 003886 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-----GYSLLIVNYRGS------LGFGEEALQSL----PGKVGSQDV 652 (789)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~-----Gy~V~~~d~rGs------~G~G~~~~~~~----~~~~~~~~~ 652 (789)
..+++|+||++||.+.+ ...|......|+.+ ||.|+++|.++. ++.+..+.... ........+
T Consensus 19 ~~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 96 (239)
T 3u0v_A 19 AGRHSASLIFLHGSGDS--GQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESI 96 (239)
T ss_dssp SSCCCEEEEEECCTTCC--HHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHH
T ss_pred CCCCCcEEEEEecCCCc--hhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhH
Confidence 35678999999996653 55676677777765 699999998642 11111111100 001111234
Q ss_pred HHHHHHHHHHHHc---CCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCc
Q 003886 653 NDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 729 (789)
Q Consensus 653 ~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~ 729 (789)
+++.+.+..+++. ..+|.++++|+|||+||++++.++.++|++++++|+.+|..+....
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------ 158 (239)
T 3u0v_A 97 DVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------ 158 (239)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH------------------
Confidence 4545555544432 3378999999999999999999999999999999999987642110
Q ss_pred cccccCCCCChhhHHHHHhcCccccCCCCCCC-EEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 730 GKDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
...... .....+| +|++||++|..||++++.++++.|+
T Consensus 159 ------------~~~~~~-------~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~ 197 (239)
T 3u0v_A 159 ------------VYQALQ-------KSNGVLPELFQCHGTADELVLHSWAEETNSMLK 197 (239)
T ss_dssp ------------HHHHHH-------HCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred ------------HHHHHH-------hhccCCCCEEEEeeCCCCccCHHHHHHHHHHHH
Confidence 000010 1234556 9999999999999999999998875
No 183
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.51 E-value=8.7e-14 Score=148.06 Aligned_cols=102 Identities=25% Similarity=0.331 Sum_probs=77.0
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCc
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (789)
.|+||++||.+.+ ...|......| ||.|+++|+|| +|.+... .......+++.+.+..+++. ++.+
T Consensus 81 ~~~vv~~hG~~~~--~~~~~~~~~~l---g~~Vi~~D~~G---~G~S~~~----~~~~~~~~~~a~dl~~~l~~--l~~~ 146 (330)
T 3p2m_A 81 APRVIFLHGGGQN--AHTWDTVIVGL---GEPALAVDLPG---HGHSAWR----EDGNYSPQLNSETLAPVLRE--LAPG 146 (330)
T ss_dssp CCSEEEECCTTCC--GGGGHHHHHHS---CCCEEEECCTT---STTSCCC----SSCBCCHHHHHHHHHHHHHH--SSTT
T ss_pred CCeEEEECCCCCc--cchHHHHHHHc---CCeEEEEcCCC---CCCCCCC----CCCCCCHHHHHHHHHHHHHH--hCCC
Confidence 4789999997764 44565554444 99999999998 4544311 11234566666666666665 4567
Q ss_pred cEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 672 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 672 rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
++.|+|||+||.+++.++.++|++++++|+.+|...
T Consensus 147 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 182 (330)
T 3p2m_A 147 AEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPS 182 (330)
T ss_dssp CCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHH
T ss_pred CcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCc
Confidence 899999999999999999999999999999998654
No 184
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.51 E-value=8.1e-14 Score=135.56 Aligned_cols=149 Identities=16% Similarity=0.126 Sum_probs=104.6
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHH-HHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLA-FLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~-~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
..|+||++||.+++.. ..|..... .|+++||.|+++|+|.+.. .+.+++.+.+..+++. +
T Consensus 3 g~p~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~--~- 63 (192)
T 1uxo_A 3 GTKQVYIIHGYRASST-NHWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHT--L- 63 (192)
T ss_dssp -CCEEEEECCTTCCTT-STTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGG--C-
T ss_pred CCCEEEEEcCCCCCcc-hhHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHh--c-
Confidence 3588999999776522 15655554 6889999999999983211 1355666666555554 3
Q ss_pred CccEEEEEcCccHHHHHHHHHhCCC--ceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHH
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH 747 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~p~--~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (789)
.+++.++|||+||.+++.++.++|+ +++++|+.+|...... .+... ..+...+. +
T Consensus 64 ~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~--------~~~~~--------~~~~~~~~--~----- 120 (192)
T 1uxo_A 64 HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLP--------TLQML--------DEFTQGSF--D----- 120 (192)
T ss_dssp CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCT--------TCGGG--------GGGTCSCC--C-----
T ss_pred cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccc--------cchhh--------hhhhhcCC--C-----
Confidence 5789999999999999999999999 9999999998754211 01000 01111110 0
Q ss_pred hcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 748 SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 748 ~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
...+.++++|+|+++|++|..+|++.+.++++.+
T Consensus 121 ----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 154 (192)
T 1uxo_A 121 ----HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI 154 (192)
T ss_dssp ----HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT
T ss_pred ----HHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc
Confidence 1223456789999999999999999999999877
No 185
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.51 E-value=2.7e-13 Score=141.86 Aligned_cols=196 Identities=16% Similarity=0.139 Sum_probs=115.6
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~-~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
+|..++....- ..|.||++||.+ ++.....|......|++. |.|+++|+|| +|.+. .. . ...
T Consensus 24 ~g~~l~y~~~g--------~g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G---~G~S~-~~--~--~~~ 86 (296)
T 1j1i_A 24 GGVETRYLEAG--------KGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLG---FGKTA-KP--D--IEY 86 (296)
T ss_dssp TTEEEEEEEEC--------CSSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTT---STTSC-CC--S--SCC
T ss_pred CCEEEEEEecC--------CCCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCC---CCCCC-CC--C--CCC
Confidence 67766643221 236799999964 322334565566677655 9999999998 55543 11 1 123
Q ss_pred cHHHHHHHHHHHHHcCCCCC-ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhc-CCC----CCcchhhh
Q 003886 651 DVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-TTD----IPDWCYVE 724 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~-~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~-~~~----~~~~~~~~ 724 (789)
.+++..+.+..+++. +.. +++.|+|||+||.+++.++.++|++++++|+.+|......... ... .+.+....
T Consensus 87 ~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 1j1i_A 87 TQDRRIRHLHDFIKA--MNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMV 164 (296)
T ss_dssp CHHHHHHHHHHHHHH--SCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHH
T ss_pred CHHHHHHHHHHHHHh--cCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHH
Confidence 456666655555554 334 7899999999999999999999999999999988642110000 000 00000000
Q ss_pred hccCccccccCCCCChhh-------------HHHHH---h--------cCccccCCCCCCCEEEEEeCCCCCCChHHHHH
Q 003886 725 SYGSKGKDSFTESPSVED-------------LTRFH---S--------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQ 780 (789)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~-------------~~~~~---~--------~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~ 780 (789)
.+....... ......+. ...+. . ......+.++++|+|+++|++|..+|++.+.+
T Consensus 165 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~ 243 (296)
T 1j1i_A 165 HLVKALTND-GFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYK 243 (296)
T ss_dssp HHHHHHSCT-TCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHHhccC-cccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHH
Confidence 000000000 00000000 00010 0 11223467899999999999999999999999
Q ss_pred HHHHCCC
Q 003886 781 VIYHIPF 787 (789)
Q Consensus 781 l~~~l~~ 787 (789)
+.+.+++
T Consensus 244 ~~~~~~~ 250 (296)
T 1j1i_A 244 FLDLIDD 250 (296)
T ss_dssp HHHHCTT
T ss_pred HHHHCCC
Confidence 9988864
No 186
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.51 E-value=5.1e-12 Score=136.01 Aligned_cols=270 Identities=13% Similarity=0.069 Sum_probs=148.1
Q ss_pred eEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC--CCCeEEEEec-CCceeEEEecCCCcccc
Q 003886 127 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--ESPIQFELWS-QSQLEKEFHVPQTVHGS 203 (789)
Q Consensus 127 ~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--~~~~~~~i~~-~~~~~~~~~~~~~~~g~ 203 (789)
..++++.++...++..+++.. .......++|||||++|++....++ +.-.+|.+.. +++...+........
T Consensus 27 ~~i~~~~~d~~~g~~~~~~~~----~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~-- 100 (361)
T 3scy_A 27 KGIYTFRFNEETGESLPLSDA----EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA-- 100 (361)
T ss_dssp CEEEEEEEETTTCCEEEEEEE----ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS--
T ss_pred CCEEEEEEeCCCCCEEEeecc----cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC--
Confidence 456666565554544444322 1134566899999999988877522 3334455553 366665554432110
Q ss_pred ccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccC-
Q 003886 204 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS- 282 (789)
Q Consensus 204 v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~- 282 (789)
....+++ ||++|+.+... ...|.+|++..
T Consensus 101 -----~p~~~~~--dg~~l~~~~~~-------------------------------------------~~~v~~~~~~~~ 130 (361)
T 3scy_A 101 -----DPCYLTT--NGKNIVTANYS-------------------------------------------GGSITVFPIGQD 130 (361)
T ss_dssp -----CEEEEEE--CSSEEEEEETT-------------------------------------------TTEEEEEEBCTT
T ss_pred -----CcEEEEE--CCCEEEEEECC-------------------------------------------CCEEEEEEeCCC
Confidence 0024455 88877765321 24577777753
Q ss_pred CceEecc---CCCC---------CCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhh
Q 003886 283 GEVQAVK---GIPK---------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 350 (789)
Q Consensus 283 g~~~~l~---~~~~---------~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 350 (789)
+.+..+. ...+ ...+..++|+|||+. |+++... ...|+++++..
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~~--------------~~~v~v~~~~~------ 186 (361)
T 3scy_A 131 GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY----LLADDLG--------------TDQIHKFNINP------ 186 (361)
T ss_dssp SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE----EEEEETT--------------TTEEEEEEECT------
T ss_pred CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE----EEEEeCC--------------CCEEEEEEEcC------
Confidence 2222110 0000 112356899999997 7665421 12455565521
Q ss_pred hhhhhcCCCCCC----C-e-------eecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCC
Q 003886 351 ELELKESSSEDL----P-V-------VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 418 (789)
Q Consensus 351 ~~~~~~~~~~~~----~-~-------~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~ 418 (789)
.++ + . ............++|||||++|++..... ..|.+||+.++....
T Consensus 187 ---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 187 ---------NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG----------GTVIAFRYADGMLDE 247 (361)
T ss_dssp ---------TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------CEEEEEEEETTEEEE
T ss_pred ---------CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC----------CeEEEEEecCCceEE
Confidence 222 1 1 11122233456789999999887666332 358888887543211
Q ss_pred cccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe-CCeEEEEEEECCCCcEEEecC--CCCCceeEEe
Q 003886 419 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLRITP--AESNFSWSLL 495 (789)
Q Consensus 419 ~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~-~~~~~l~~~dl~tg~~~~lt~--~~~~~~~~~~ 495 (789)
+..+...+. .+. ....+.|+|||++||++... .+...+|.++..+|+.+.+.. .........|
T Consensus 248 -------~~~~~~~~~--~~~-----~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~ 313 (361)
T 3scy_A 248 -------IQTVAADTV--NAQ-----GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFII 313 (361)
T ss_dssp -------EEEEESCSS--CCC-----CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEE
T ss_pred -------eEEEecCCC--CCC-----CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEE
Confidence 111111111 011 12367899999988776655 567788888777887655432 1222344689
Q ss_pred eecCCEEEEEEeCC
Q 003886 496 TLDGDNIIAVSSSP 509 (789)
Q Consensus 496 s~dg~~l~~~~ss~ 509 (789)
++||++|++.....
T Consensus 314 spdg~~l~~~~~~~ 327 (361)
T 3scy_A 314 TPNGKYLLVACRDT 327 (361)
T ss_dssp CTTSCEEEEEETTT
T ss_pred CCCCCEEEEEECCC
Confidence 99999887766443
No 187
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.51 E-value=2.6e-14 Score=147.82 Aligned_cols=165 Identities=17% Similarity=0.180 Sum_probs=112.5
Q ss_pred EEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHC--CcEEEEEcCC---CCCCCCchhhcc--CCCCCCcc-
Q 003886 579 IFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYR---GSLGFGEEALQS--LPGKVGSQ- 650 (789)
Q Consensus 579 ~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~--Gy~V~~~d~r---Gs~G~G~~~~~~--~~~~~~~~- 650 (789)
+...|. .+++++|+||++||.+. ....|....+.|+.+ ++.+++++-+ ...|.|..|... ........
T Consensus 55 y~~~p~--~~~~~~plVI~LHG~G~--~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~ 130 (285)
T 4fhz_A 55 FGRRGA--APGEATSLVVFLHGYGA--DGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAA 130 (285)
T ss_dssp EEEEES--CTTCCSEEEEEECCTTB--CHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHH
T ss_pred eecCCC--CCCCCCcEEEEEcCCCC--CHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchh
Confidence 344454 26788999999999554 345565556667653 8899998843 123345443210 00000011
Q ss_pred ------cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhh
Q 003886 651 ------DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 724 (789)
Q Consensus 651 ------~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~ 724 (789)
...++.+.++.++++..+|++||+|+|+|+||++++.++.++|++|+++|+.++....
T Consensus 131 ~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~---------------- 194 (285)
T 4fhz_A 131 AEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA---------------- 194 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC----------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC----------------
Confidence 1345556666666666699999999999999999999999999999999988774210
Q ss_pred hccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 725 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.+... ...+.++|+|++||++|.+||++++.++++.|++
T Consensus 195 ---------------~~~~~---------~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~ 233 (285)
T 4fhz_A 195 ---------------PERLA---------EEARSKPPVLLVHGDADPVVPFADMSLAGEALAE 233 (285)
T ss_dssp ---------------HHHHH---------HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred ---------------chhhh---------hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHH
Confidence 01100 1123467999999999999999999999998864
No 188
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.51 E-value=2.9e-12 Score=136.23 Aligned_cols=259 Identities=10% Similarity=0.032 Sum_probs=145.3
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (789)
++|||+++++.... ...+.+++++...++...+...+.. ......+|||||++|++....+ +.-.+|.
T Consensus 45 ~spdg~~l~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~-~~i~~~d 112 (343)
T 1ri6_A 45 VSPDKRYLYVGVRP--------EFRVLAYRIAPDDGALTFAAESALP---GSLTHISTDHQGQFVFVGSYNA-GNVSVTR 112 (343)
T ss_dssp ECTTSSEEEEEETT--------TTEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred ECCCCCEEEEeecC--------CCeEEEEEecCCCCceeeccccccC---CCCcEEEEcCCCCEEEEEecCC-CeEEEEE
Confidence 46999988665321 1355666664333333333211110 2466789999999998776533 2222333
Q ss_pred EecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCc
Q 003886 184 LWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW 263 (789)
Q Consensus 184 i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 263 (789)
+. .+...+....... +.. ...+.|||||++|+....
T Consensus 113 ~~-~~~~~~~~~~~~~-~~~------~~~~~~s~dg~~l~~~~~------------------------------------ 148 (343)
T 1ri6_A 113 LE-DGLPVGVVDVVEG-LDG------CHSANISPDNRTLWVPAL------------------------------------ 148 (343)
T ss_dssp EE-TTEEEEEEEEECC-CTT------BCCCEECTTSSEEEEEEG------------------------------------
T ss_pred CC-CCccccccccccC-CCC------ceEEEECCCCCEEEEecC------------------------------------
Confidence 32 3332222222111 111 268999999998876532
Q ss_pred ccccCCccCceEEEEEccC-CceEecc----CCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceE
Q 003886 264 GETYAGKRQPSLFVININS-GEVQAVK----GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (789)
Q Consensus 264 g~~~~~~~~~~l~v~d~~~-g~~~~l~----~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~ 338 (789)
....|++||+.+ ++...+. .......+..++|+|||+. |+++... ...|+
T Consensus 149 -------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~----l~~~~~~--------------~~~i~ 203 (343)
T 1ri6_A 149 -------KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY----AYCVNEL--------------NSSVD 203 (343)
T ss_dssp -------GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE----EEEEETT--------------TTEEE
T ss_pred -------CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE----EEEEeCC--------------CCEEE
Confidence 125689999887 7654221 0222335567899999997 6666421 22577
Q ss_pred EEecccccchhhhhhhhcCCCCCCCee---e---cCCC---CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEe
Q 003886 339 AVRVSLYKSEASELELKESSSEDLPVV---N---LTES---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (789)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~~---~---Lt~~---~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~ 409 (789)
++++.. .+++.+ . +... ......++|||||++|++....+ ..|.+|
T Consensus 204 ~~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~----------~~i~v~ 258 (343)
T 1ri6_A 204 VWELKD---------------PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA----------SLITVF 258 (343)
T ss_dssp EEESSC---------------TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT----------TEEEEE
T ss_pred EEEecC---------------CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC----------CEEEEE
Confidence 777621 122221 1 1111 11234589999999886554322 368888
Q ss_pred ecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003886 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (789)
Q Consensus 410 d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt 484 (789)
|+...... ...+...... ..+..+.|+|||+.|++.....+...+|.+|..+|+.+.+.
T Consensus 259 d~~~~~~~------~~~~~~~~~~----------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 259 SVSEDGSV------LSKEGFQPTE----------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp EECTTSCC------EEEEEEEECS----------SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred EEcCCCCc------eEEeeeecCC----------CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 88632111 0011111100 12456789999998877665678888999999888876653
No 189
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.50 E-value=4.5e-14 Score=157.00 Aligned_cols=114 Identities=23% Similarity=0.316 Sum_probs=81.0
Q ss_pred CCcEEEEEcCCCCCCCchh-hHHHHH---HHHHCCcEEEEEcCCCCCCCCchhhccC-C--CC---C----CcccHHHHH
Q 003886 591 CDPLIVVLHGGPHSVSLSS-YSKSLA---FLSSVGYSLLIVNYRGSLGFGEEALQSL-P--GK---V----GSQDVNDVL 656 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~-~~~~~~---~la~~Gy~V~~~d~rGs~G~G~~~~~~~-~--~~---~----~~~~~~D~~ 656 (789)
+.|+||++||.+++..... |..... .|++.||.|+++|+||+ |+|.+..... + +. + ....++|+.
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~-~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a 186 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGS-PFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDV 186 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTC-SSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHH
T ss_pred CCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCC-CCCCCCCCCCCcccccccccccccccccHHHHH
Confidence 4689999999877643321 444332 46678999999999984 3454432110 0 00 1 124577777
Q ss_pred HHHHHHHHcCCCCCcc-EEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 657 TAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 657 ~~i~~l~~~~~~d~~r-v~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
+.+..+++. ++.++ ++|+|||+||++++.++.++|++++++|+.++...
T Consensus 187 ~dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~ 236 (444)
T 2vat_A 187 RIHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCR 236 (444)
T ss_dssp HHHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSB
T ss_pred HHHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEecccc
Confidence 777777765 34567 99999999999999999999999999999998654
No 190
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.50 E-value=1.2e-12 Score=150.37 Aligned_cols=264 Identities=18% Similarity=0.131 Sum_probs=164.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
..+...+|||||+.|+.....+ .+.+| ..++..+.+.. ....+ ..+.|+|||+.|+....+....
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~-----~i~~w~~~~~~~~~~~~---~~~~v------~~~~~s~~g~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQHLQTLTG---HSSSV------WGVAFSPDGQTIASASDDKTVK 369 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECC---CSSCE------EEEEECTTSSEEEEEETTSEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCeeEEEeC---CCCCE------EEEEECCCCCEEEEEeCCCEEE
Confidence 4577889999999999876553 45677 33333222221 11122 6899999999999877654322
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (789)
.|+. ..........+........|++|.....++..+..|.+||..+.....+ ......+..++|+||++.
T Consensus 370 --~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~d~~~---- 440 (577)
T 2ymu_A 370 --LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVWGVAFSPDDQT---- 440 (577)
T ss_dssp --EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEE--ECCSSCEEEEEECTTSSE----
T ss_pred --EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEe--cCCCCCeEEEEECCCCCE----
Confidence 2221 1111111222333344556788855555556678899999766555555 233446778999999997
Q ss_pred EEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecC
Q 003886 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (789)
Q Consensus 313 l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~ 392 (789)
|+..+. +..|.++|+ .+.....+..+...+...+|||||+.|+..+.+
T Consensus 441 l~~~~~---------------d~~v~~w~~-----------------~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 441 IASASD---------------DKTVKLWNR-----------------NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp EEEEET---------------TSEEEEEET-----------------TSCEEEEEECCSSCEEEEEECTTSCEEEEEETT
T ss_pred EEEEcC---------------CCEEEEEEC-----------------CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 776652 235777886 555667777777778889999999999877654
Q ss_pred CCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003886 393 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (789)
Q Consensus 393 ~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (789)
. .|.+||..+.....+. + +...+..+.|+|||+.| +++..++...||
T Consensus 489 ~-----------~i~iw~~~~~~~~~~~-~-------------------h~~~v~~l~~s~dg~~l-~s~~~dg~v~lw- 535 (577)
T 2ymu_A 489 K-----------TVKLWNRNGQLLQTLT-G-------------------HSSSVRGVAFSPDGQTI-ASASDDKTVKLW- 535 (577)
T ss_dssp S-----------EEEEEETTSCEEEEEE-C-------------------CSSCEEEEEECTTSSCE-EEEETTSEEEEE-
T ss_pred C-----------EEEEEcCCCCEEEEEe-C-------------------CCCCEEEEEEcCCCCEE-EEEECcCEEEEE-
Confidence 3 5888985431111110 0 11134567899999965 556666655555
Q ss_pred EECCCCcEEEecCCCCCceeEEeeecCCEEEEEE
Q 003886 473 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 473 ~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ 506 (789)
|..+..+..+......+....|++||+.|+...
T Consensus 536 -d~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 536 -NRNGQLLQTLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp -CTTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred -eCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 654444444544344455568899998876543
No 191
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.50 E-value=6.7e-13 Score=157.19 Aligned_cols=254 Identities=11% Similarity=0.099 Sum_probs=158.1
Q ss_pred CCCCCeEEEEecCCCCC-CeEEEEec---CCc---eeEEEecCC--CccccccCCCcccceeec-CCCCEEEEEeecCCC
Q 003886 162 SPSGSKLLVVRNPENES-PIQFELWS---QSQ---LEKEFHVPQ--TVHGSVYADGWFEGISWN-SDETLIAYVAEEPSP 231 (789)
Q Consensus 162 SPdG~~la~~~~~~~~~-~~~~~i~~---~~~---~~~~~~~~~--~~~g~v~~d~~~~~~~wS-pDg~~la~~~~~~~~ 231 (789)
.|+|.+++|.+..+++. ..++.... .+. .+.+++... ..|+. -....++|| |||++|||+.....
T Consensus 123 ~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~----~~~~~~~~S~PDG~~lAy~~~~~G- 197 (751)
T 2xe4_A 123 YVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAF----CDVMEVKPAPPEHDLVAFSVDMSG- 197 (751)
T ss_dssp EEETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSC----CEEEEEEECTTTTCEEEEEEESSS-
T ss_pred eEECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCe----EEEeeeEecCCCCCEEEEEEeCCC-
Confidence 37999999998876443 33444444 443 344444311 11111 023679999 99999999876431
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCC-ceEeccCCCCCCccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g-~~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
.....|+++|+++| +. +. ..-......++|||||+.
T Consensus 198 --------------------------------------~~~~~l~v~dl~~g~~~--l~-~~~~~~~~~~~WspDg~~-- 234 (751)
T 2xe4_A 198 --------------------------------------NEVYTIEFKRISDPSQT--IA-DKVSGTNGEIVWGPDHTS-- 234 (751)
T ss_dssp --------------------------------------SSCEEEEEEETTCTTCC--CC-CCEEEECSCCEECSSTTE--
T ss_pred --------------------------------------CceEEEEEEECCCCCEe--CC-ccccCceeeEEEecCCCE--
Confidence 12357999999998 62 21 000112468999999999
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe--eecC--CCCCccCcceecCCCCEE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLT--ESISSAFFPRFSPDGKFL 386 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~Lt--~~~~~~~~p~~SpDG~~l 386 (789)
|+|+..... .++..||++++ .++.. +.+. ........+.|||||++|
T Consensus 235 --l~y~~~d~~----------~~~~~v~~~~l-----------------gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l 285 (751)
T 2xe4_A 235 --LFYVTKDET----------LRENKVWRHVM-----------------GKLQSEDVCLYEEHNPLFSAFMYKAADTNTL 285 (751)
T ss_dssp --EEEEEECTT----------CCEEEEEEEET-----------------TSCGGGCEEEEECCCTTCEEEEEECTTSSEE
T ss_pred --EEEEEECCC----------CCCCEEEEEEC-----------------CCCchhcEEEEecCCCceEEEEEECCCCCEE
Confidence 999975321 12347999998 44322 2332 222345678999999999
Q ss_pred EEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC---CCEEEEEEE
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD---GCTMLLSSI 463 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D---g~~l~~~~~ 463 (789)
+|.+... ...+||++|+.++.... .+..+... .....|++| |+.|+|.++
T Consensus 286 ~~~~~~~--------~~~~l~~~d~~~~~~~~------~~~~l~~~-------------~~~~~~s~~~~~g~~l~~~t~ 338 (751)
T 2xe4_A 286 CIGSQSP--------ETAEVHLLDLRKGNAHN------TLEIVRPR-------------EKGVRYDVQMHGTSHLVILTN 338 (751)
T ss_dssp EEEEECS--------SCEEEEEEESSSCTTCC------CEEESSCC-------------CTTCCEEEEEETTTEEEEEEC
T ss_pred EEEecCC--------CCceEEEEECCCCCCCc------eeEEeecC-------------CCCceEEEeeeeCCEEEEEeC
Confidence 9998653 35689999998752111 00111100 113346666 889999987
Q ss_pred eC--CeEEEEEEECCC-CcEEE-ecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEee
Q 003886 464 WG--SSQVIISVNVSS-GELLR-ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (789)
Q Consensus 464 ~~--~~~~l~~~dl~t-g~~~~-lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~ 520 (789)
.+ +..+||.+++++ ++.+. +...........++.+++.|++...... ...|+++++
T Consensus 339 ~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g-~~~l~~~dl 398 (751)
T 2xe4_A 339 EGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG-LTRIWTMMA 398 (751)
T ss_dssp TTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT-EEEEEEEEC
T ss_pred CCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC-EEEEEEEec
Confidence 65 678999999976 45555 5444433344567777888887775443 456888875
No 192
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.50 E-value=5.5e-14 Score=152.02 Aligned_cols=116 Identities=14% Similarity=0.145 Sum_probs=80.1
Q ss_pred CCCcEEEEEcCCCCCCCc----------h-hhHHHH---HHHHHCCcEEEEEcCCCCC--------CCCchhhccCCC--
Q 003886 590 SCDPLIVVLHGGPHSVSL----------S-SYSKSL---AFLSSVGYSLLIVNYRGSL--------GFGEEALQSLPG-- 645 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~----------~-~~~~~~---~~la~~Gy~V~~~d~rGs~--------G~G~~~~~~~~~-- 645 (789)
.+.|+||++||.+++... . .|.... ..|.+.||.|+++|+||.+ ++|.+......+
T Consensus 40 ~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~ 119 (377)
T 3i1i_A 40 ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDE 119 (377)
T ss_dssp TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSB
T ss_pred CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCCc
Confidence 456999999998776332 0 133333 4666889999999999742 122211110001
Q ss_pred ---CCCcccHHHHHHHHHHHHHcCCCCCccEE-EEEcCccHHHHHHHHHhCCCceeEEEE-eCCccc
Q 003886 646 ---KVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAA-RNPLCN 707 (789)
Q Consensus 646 ---~~~~~~~~D~~~~i~~l~~~~~~d~~rv~-l~G~S~GG~~a~~~~~~~p~~~~a~v~-~~pv~~ 707 (789)
.+....++|+.+.+..+++. ++.+++. |+|||+||.+++.+|.++|++++++|+ .++...
T Consensus 120 ~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (377)
T 3i1i_A 120 YAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQN 184 (377)
T ss_dssp CGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBC
T ss_pred ccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCc
Confidence 01234678888888888876 4567886 999999999999999999999999999 665443
No 193
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.50 E-value=4.8e-13 Score=137.49 Aligned_cols=105 Identities=20% Similarity=0.233 Sum_probs=79.2
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
+..|.||++||.+++ ...|......|+++||.|+++|+|| +|.+.... .....++++.+.+..+++. ++
T Consensus 8 ~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~----~~~~~~~~~a~dl~~~l~~--l~ 76 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLG--AWIWYKLKPLLESAGHKVTAVDLSA---AGINPRRL----DEIHTFRDYSEPLMEVMAS--IP 76 (264)
T ss_dssp -CCCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSCCG----GGCCSHHHHHHHHHHHHHH--SC
T ss_pred CCCCeEEEECCCccc--cchHHHHHHHHHhCCCEEEEeecCC---CCCCCCCc----ccccCHHHHHHHHHHHHHH--hC
Confidence 456889999997754 4567778889999999999999998 55543210 0113456666655555554 22
Q ss_pred -CccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 670 -PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 670 -~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
.+++.|+||||||++++.++.++|++++++|+.++.
T Consensus 77 ~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~ 113 (264)
T 2wfl_A 77 PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAM 113 (264)
T ss_dssp TTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSC
T ss_pred CCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeec
Confidence 468999999999999999999999999999998864
No 194
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.6e-11 Score=131.70 Aligned_cols=282 Identities=11% Similarity=0.012 Sum_probs=173.8
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
.++|||+.++... ..+.+.++++.. +.....+.... ..+..++|+|||++|+.....+ .+
T Consensus 39 ~~s~~~~~l~~~~---------~dg~i~vwd~~~-~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~~dg-----~i 98 (369)
T 3zwl_B 39 KYNKEGDLLFSCS---------KDSSASVWYSLN-GERLGTLDGHT-----GTIWSIDVDCFTKYCVTGSADY-----SI 98 (369)
T ss_dssp EECTTSCEEEEEE---------SSSCEEEEETTT-CCEEEEECCCS-----SCEEEEEECTTSSEEEEEETTT-----EE
T ss_pred EEcCCCCEEEEEe---------CCCEEEEEeCCC-chhhhhhhhcC-----CcEEEEEEcCCCCEEEEEeCCC-----eE
Confidence 4578998876543 233566666532 22223333222 4588999999999999876654 45
Q ss_pred EEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 183 ELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 183 ~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
.+| ..++....+.....+ ..+.|+|||+.|+....+..
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~l~~~~~~~~------------------------------ 138 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPV----------KRVEFSPCGNYFLAILDNVM------------------------------ 138 (369)
T ss_dssp EEEETTTCCEEEEEECSSCE----------EEEEECTTSSEEEEEECCBT------------------------------
T ss_pred EEEECCCCcEEEEeecCCCe----------EEEEEccCCCEEEEecCCcc------------------------------
Confidence 666 345555555433333 78999999999988755410
Q ss_pred CCcccccCCccCceEEEEEccCCce------------EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeee
Q 003886 261 EDWGETYAGKRQPSLFVININSGEV------------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK 328 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~------------~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~ 328 (789)
.....|.+||+.++.. ..+........+..++|+|||+. |+..+
T Consensus 139 ---------~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~----------- 194 (369)
T 3zwl_B 139 ---------KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY----IIAGH----------- 194 (369)
T ss_dssp ---------TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE----EEEEE-----------
T ss_pred ---------CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE----EEEEc-----------
Confidence 0235677777765532 11211122226778899999997 66654
Q ss_pred eeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEE
Q 003886 329 YCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR 408 (789)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~ 408 (789)
....|+++|+.. .......+..+...+....|+|||+.|+..+.+. .|++
T Consensus 195 ----~dg~i~i~d~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~v 244 (369)
T 3zwl_B 195 ----KDGKISKYDVSN---------------NYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDT-----------NSFL 244 (369)
T ss_dssp ----TTSEEEEEETTT---------------TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----------EEEE
T ss_pred ----CCCEEEEEECCC---------------CcEeEEEEecCCCceeEEEECCCCCEEEEecCCc-----------eEEE
Confidence 233688888720 1234456666677788999999999998776543 5999
Q ss_pred eecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCC-----------eEEEEEEECCC
Q 003886 409 IDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS-----------SQVIISVNVSS 477 (789)
Q Consensus 409 ~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~-----------~~~l~~~dl~t 477 (789)
||+.++....... .. ..+..+.|+|+++.+++....++ ...+..+|+.+
T Consensus 245 ~d~~~~~~~~~~~----------~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 245 VDVSTLQVLKKYE----------TD----------CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp EETTTCCEEEEEE----------CS----------SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred EECCCCceeeeec----------CC----------CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 9987754321110 00 12346689999998876654331 22577788888
Q ss_pred CcEEEecCC-CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 478 GELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 478 g~~~~lt~~-~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
++....... ...+....|+++++.|+....+ ..+.+.++..
T Consensus 305 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~ 346 (369)
T 3zwl_B 305 EEEIGRVQGHFGPLNTVAISPQGTSYASGGED----GFIRLHHFEK 346 (369)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETT----SEEEEEEECH
T ss_pred CcchhheecccCcEEEEEECCCCCEEEEEcCC----CeEEEEECcc
Confidence 876655443 3345556888988876655432 2366666643
No 195
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.49 E-value=1.8e-13 Score=139.73 Aligned_cols=100 Identities=22% Similarity=0.229 Sum_probs=73.4
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
..|.||++||.+.+ ...|......|++. |.|+++|+|| +|.+.... ...++++.+.+..+++. ++.
T Consensus 15 ~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~~------~~~~~~~a~dl~~~l~~--l~~ 80 (255)
T 3bf7_A 15 NNSPIVLVHGLFGS--LDNLGVLARDLVND-HNIIQVDVRN---HGLSPREP------VMNYPAMAQDLVDTLDA--LQI 80 (255)
T ss_dssp CCCCEEEECCTTCC--TTTTHHHHHHHTTT-SCEEEECCTT---STTSCCCS------CCCHHHHHHHHHHHHHH--HTC
T ss_pred CCCCEEEEcCCccc--HhHHHHHHHHHHhh-CcEEEecCCC---CCCCCCCC------CcCHHHHHHHHHHHHHH--cCC
Confidence 45779999997764 45677777788765 9999999998 55553211 12344444444444443 234
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCC
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 704 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~p 704 (789)
+++.|+|||+||.+++.++.++|++++++|+.++
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 114 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDI 114 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcC
Confidence 6899999999999999999999999999998753
No 196
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.49 E-value=5.8e-14 Score=136.96 Aligned_cols=147 Identities=12% Similarity=0.070 Sum_probs=99.3
Q ss_pred CCcEEEEEcCCCCCCC-chhhHH-HHHHHHHC-CcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCC
Q 003886 591 CDPLIVVLHGGPHSVS-LSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~-~~~~~~-~~~~la~~-Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (789)
+.|+||++||++++.. ...|.. ....|+++ ||.|+++|+||..+ . +....++.+++.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~---------------~---~~~~~~~~~~~~-- 62 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT---------------A---RESIWLPFMETE-- 62 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT---------------C---CHHHHHHHHHHT--
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc---------------c---cHHHHHHHHHHH--
Confidence 5689999999877532 234544 56778877 99999999997311 0 123344445554
Q ss_pred CCC-ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHH
Q 003886 668 ANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRF 746 (789)
Q Consensus 668 ~d~-~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (789)
++. +++.|+|||+||++++.++.++| ++++|+.+|...... .. .... ..+...+. .
T Consensus 63 l~~~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~--------~~--~~~~-----~~~~~~~~--~---- 119 (194)
T 2qs9_A 63 LHCDEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLG--------DE--NERA-----SGYFTRPW--Q---- 119 (194)
T ss_dssp SCCCTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTT--------CH--HHHH-----TSTTSSCC--C----
T ss_pred hCcCCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccc--------hh--hhHH-----Hhhhcccc--c----
Confidence 333 78999999999999999999998 999999998754210 00 0000 00100110 0
Q ss_pred HhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 747 HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 747 ~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
...+.++.+|+|+++|++|..+|++.+.++++.+
T Consensus 120 -----~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~ 153 (194)
T 2qs9_A 120 -----WEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL 153 (194)
T ss_dssp -----HHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH
T ss_pred -----HHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc
Confidence 1112335679999999999999999999998876
No 197
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.49 E-value=6e-14 Score=146.03 Aligned_cols=120 Identities=18% Similarity=0.119 Sum_probs=85.7
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
.+|..++....- +.|+||++||.+.+ ...|......|++ +|.|+++|+|| +|.+..... ......
T Consensus 15 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~vi~~D~~G---~G~S~~~~~-~~~~~~ 79 (297)
T 2qvb_A 15 IAGKRMAYIDEG--------KGDAIVFQHGNPTS--SYLWRNIMPHLEG-LGRLVACDLIG---MGASDKLSP-SGPDRY 79 (297)
T ss_dssp ETTEEEEEEEES--------SSSEEEEECCTTCC--GGGGTTTGGGGTT-SSEEEEECCTT---STTSCCCSS-CSTTSS
T ss_pred ECCEEEEEEecC--------CCCeEEEECCCCch--HHHHHHHHHHHhh-cCeEEEEcCCC---CCCCCCCCC-ccccCc
Confidence 367777654432 24899999997764 4456656666765 49999999998 554432111 011224
Q ss_pred cHHHHHHHHHHHHHcCCCCC-ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 651 DVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~-~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
..+++.+.+..+++. ++. +++.++|||+||.+++.++.++|++++++|+.+|...
T Consensus 80 ~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 135 (297)
T 2qvb_A 80 SYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVT 135 (297)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCS
T ss_pred CHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccC
Confidence 566766666666665 455 7899999999999999999999999999999998653
No 198
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.48 E-value=2.8e-12 Score=135.82 Aligned_cols=269 Identities=13% Similarity=0.082 Sum_probs=164.4
Q ss_pred cccEEEEeCCC----CCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEee
Q 003886 154 TGASAVVPSPS----GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (789)
Q Consensus 154 ~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~ 227 (789)
..+...+|+|+ |+.|+..+..+ ...+|+ .++......+ .+..+.| ..+.|+|++..++..+.
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs~D~-----~v~vW~~~~~~~~~~~~l-~gh~~~v------~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGSLDD-----LVKVWKWRDERLDLQWSL-EGHQLGV------VSVDISHTLPIAASSSL 100 (321)
T ss_dssp SCEEEEEEC-------CEEEEEETTS-----CEEEEEEETTEEEEEEEE-CCCSSCE------EEEEECSSSSEEEEEET
T ss_pred CcEEEEEEecCCCCCCCEEEEEcCCC-----CEEEEECCCCCeeeeeee-ccCCCCE------EEEEECCCCCEEEEEeC
Confidence 45889999986 55677665543 355662 2332222222 2222333 78999999999888776
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003886 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (789)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (789)
+.... .|+.....................|.++....+++.....|.+||+.+++..... ......+..++|+|||+
T Consensus 101 D~~i~--lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 101 DAHIR--LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGK 177 (321)
T ss_dssp TSEEE--EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSS
T ss_pred CCcEE--EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCC
Confidence 65432 3432222211112222233335678888666666667789999999988765431 22334567899999999
Q ss_pred CCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecCCCCEE
Q 003886 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFL 386 (789)
Q Consensus 308 ~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~~l 386 (789)
. |+..+ .+..|.++|+ .++ ....+..+...+...+|||||+.|
T Consensus 178 ~----lasg~---------------~dg~i~iwd~-----------------~~~~~~~~~~~h~~~v~~l~~spd~~~l 221 (321)
T 3ow8_A 178 Y----LASGA---------------IDGIINIFDI-----------------ATGKLLHTLEGHAMPIRSLTFSPDSQLL 221 (321)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCCCEEEECTTSCEE
T ss_pred E----EEEEc---------------CCCeEEEEEC-----------------CCCcEEEEEcccCCceeEEEEcCCCCEE
Confidence 7 77665 2336888898 444 345666677778999999999998
Q ss_pred EEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCC
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (789)
+..+.+. .|.+||+.++.......+ ....+..+.|+|||+.| +++..++
T Consensus 222 ~s~s~dg-----------~i~iwd~~~~~~~~~~~~-------------------h~~~v~~~~~sp~~~~l-~s~s~D~ 270 (321)
T 3ow8_A 222 VTASDDG-----------YIKIYDVQHANLAGTLSG-------------------HASWVLNVAFCPDDTHF-VSSSSDK 270 (321)
T ss_dssp EEECTTS-----------CEEEEETTTCCEEEEECC-------------------CSSCEEEEEECTTSSEE-EEEETTS
T ss_pred EEEcCCC-----------eEEEEECCCcceeEEEcC-------------------CCCceEEEEECCCCCEE-EEEeCCC
Confidence 8776543 489999876543211000 01123467899999865 5556566
Q ss_pred eEEEEEEECCCCcEEEecCC-CCCceeEEeeecCCEEEEEE
Q 003886 467 SQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 467 ~~~l~~~dl~tg~~~~lt~~-~~~~~~~~~s~dg~~l~~~~ 506 (789)
...|| |+.+++....... ...+....|+++++.|+...
T Consensus 271 ~v~iw--d~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 271 SVKVW--DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp CEEEE--ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEE--eCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 55555 7777776554333 33455567888888766444
No 199
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.48 E-value=1.9e-12 Score=139.87 Aligned_cols=239 Identities=15% Similarity=0.128 Sum_probs=141.3
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCcc---eecccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEE
Q 003886 120 LLANKRKKFMLSTVISKENENSVTFQWAPFPV---EMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEF 194 (789)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~---~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~ 194 (789)
+........+.++.+.........+....+.. ....+...+|||||++||..+...+ ..+.+|+ .++....+
T Consensus 97 l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d---~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 97 ITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVP---AIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSS---CEEEEEETTTTEEEEEE
T ss_pred EEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCC---CEEEEeECCCCcEEEEe
Confidence 44444555666666644433222222111100 0022567899999999998764322 3567773 44443333
Q ss_pred ecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCce
Q 003886 195 HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS 274 (789)
Q Consensus 195 ~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~ 274 (789)
... +.| ..++|||||+.|+..+. ..
T Consensus 174 ~~~----~~V------~~v~fspdg~~l~s~s~---------------------------------------------~~ 198 (365)
T 4h5i_A 174 ETR----GEV------KDLHFSTDGKVVAYITG---------------------------------------------SS 198 (365)
T ss_dssp ECS----SCC------CEEEECTTSSEEEEECS---------------------------------------------SC
T ss_pred CCC----Cce------EEEEEccCCceEEeccc---------------------------------------------ee
Confidence 322 233 78999999999988642 23
Q ss_pred EEEEEccCCceEe-ccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhh
Q 003886 275 LFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELE 353 (789)
Q Consensus 275 l~v~d~~~g~~~~-l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~ 353 (789)
+.+|+..+++... .........+..++|+|||+. ++..+.... ....++.+++....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~----l~~~s~d~~-----------~~~~i~~~~~~~~~------- 256 (365)
T 4h5i_A 199 LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV----LIAASLKKG-----------KGIVLTKISIKSGN------- 256 (365)
T ss_dssp EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE----EEEEEESSS-----------CCEEEEEEEEETTE-------
T ss_pred EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE----EEEEecCCc-----------ceeEEeecccccce-------
Confidence 5667766665432 211223345778999999998 777664322 11246666652100
Q ss_pred hhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCc-ccceeeEEeeeec
Q 003886 354 LKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-LEKIVDVIPVVQC 432 (789)
Q Consensus 354 ~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~-t~~~~~v~~~~~~ 432 (789)
........+..+...+...+|||||++||..+.+. .|.+||+.+++.... ..+.
T Consensus 257 -----~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----------~V~iwd~~~~~~~~~~~~gH--------- 311 (365)
T 4h5i_A 257 -----TSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-----------SIALVKLKDLSMSKIFKQAH--------- 311 (365)
T ss_dssp -----EEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----------CEEEEETTTTEEEEEETTSS---------
T ss_pred -----ecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----------EEEEEECCCCcEEEEecCcc---------
Confidence 00112334556666788899999999999887653 489999887553211 1111
Q ss_pred cCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003886 433 AEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (789)
Q Consensus 433 ~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~d 474 (789)
...+..++|||||++| ++++.++..+||.+.
T Consensus 312 ----------~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 312 ----------SFAITEVTISPDSTYV-ASVSAANTIHIIKLP 342 (365)
T ss_dssp ----------SSCEEEEEECTTSCEE-EEEETTSEEEEEECC
T ss_pred ----------cCCEEEEEECCCCCEE-EEEeCCCeEEEEEcC
Confidence 1234577899999855 677888888888764
No 200
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.48 E-value=3.1e-13 Score=143.69 Aligned_cols=160 Identities=11% Similarity=0.131 Sum_probs=108.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhH-------HHHHHHHHCCcEEEEEcCCCCCCCCchhhcc------
Q 003886 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQS------ 642 (789)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~-------~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~------ 642 (789)
+...++.|.+ .+.|.||++||++.+ ...|. .....|+++||.|+++|+||.+..+......
T Consensus 50 ~~~~~~~p~~----~~~~~vvl~HG~g~~--~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~ 123 (328)
T 1qlw_A 50 MYVRYQIPQR----AKRYPITLIHGCCLT--GMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLG 123 (328)
T ss_dssp EEEEEEEETT----CCSSCEEEECCTTCC--GGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTT
T ss_pred EEEEEEccCC----CCCccEEEEeCCCCC--CCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccccccc
Confidence 4555666752 234679999997754 44565 3678899999999999999843222111000
Q ss_pred -------------------------------CCC-CCCcccHHH------------------HHHHHHHHHHcCCCCCcc
Q 003886 643 -------------------------------LPG-KVGSQDVND------------------VLTAIDHVIDMGLANPSK 672 (789)
Q Consensus 643 -------------------------------~~~-~~~~~~~~D------------------~~~~i~~l~~~~~~d~~r 672 (789)
..+ .+....+++ +.+++..++++ + ++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~--~~ 199 (328)
T 1qlw_A 124 KAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK--L--DG 199 (328)
T ss_dssp SSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH--H--TS
T ss_pred ccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHH--h--CC
Confidence 000 000000223 55666666665 2 38
Q ss_pred EEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCcc
Q 003886 673 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI 752 (789)
Q Consensus 673 v~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 752 (789)
+.++|||+||.+++.++.++|++++++|+.+|... . .+.
T Consensus 200 ~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-----------------------------~------------~~~ 238 (328)
T 1qlw_A 200 TVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-----------------------------P------------KPE 238 (328)
T ss_dssp EEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-----------------------------C------------CGG
T ss_pred ceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-----------------------------C------------CHH
Confidence 99999999999999999999999999999987530 0 001
Q ss_pred ccCCCCCCCEEEEEeCCCCCCCh-----HHHHHHHHHCC
Q 003886 753 SHISKVKTPTIFLLGAQDLRVPV-----SNGLQVIYHIP 786 (789)
Q Consensus 753 ~~~~~i~~P~Lii~G~~D~~vp~-----~~~~~l~~~l~ 786 (789)
.....+++|+|++||++|..+|+ +++.++++.++
T Consensus 239 ~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~ 277 (328)
T 1qlw_A 239 DVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALN 277 (328)
T ss_dssp GCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHH
T ss_pred HHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHH
Confidence 11223578999999999999997 99999988875
No 201
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.48 E-value=8.1e-13 Score=142.25 Aligned_cols=122 Identities=20% Similarity=0.316 Sum_probs=90.8
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
.+|..++....-|+ +...|+||++||.+.+ ...|......|+++||.|+++|+|| +|.+... ......
T Consensus 10 ~~g~~l~y~~~G~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~vi~~d~~g---~g~s~~~---~~~~~~ 77 (356)
T 2e3j_A 10 CRGTRIHAVADSPP----DQQGPLVVLLHGFPES--WYSWRHQIPALAGAGYRVVAIDQRG---YGRSSKY---RVQKAY 77 (356)
T ss_dssp ETTEEEEEEEECCT----TCCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCCC---CSGGGG
T ss_pred cCCeEEEEEEecCC----CCCCCEEEEECCCCCc--HHHHHHHHHHHHHcCCEEEEEcCCC---CCCCCCC---Cccccc
Confidence 36788887776653 2356899999997764 4567677888999999999999998 4443321 111123
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
.++++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+.++..
T Consensus 78 ~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 78 RIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp SHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 455666655555554 456799999999999999999999999999999988654
No 202
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.48 E-value=4.3e-12 Score=135.91 Aligned_cols=286 Identities=14% Similarity=0.167 Sum_probs=166.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
.+...+|||||+.||..+..+ .+.+| .++..........+..+.| ..++|||||+.||..+.+....
T Consensus 18 ~v~~l~~sp~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~~h~~~v------~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSEGHQRTV------RKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTS-----CEEEEEEETTEEEEEEEECSSCSSCE------EEEEECTTSSEEEEEETTSCEE
T ss_pred cEEEEEECCCCCEEEEEcCCC-----eEEEEEcCCCcceeeeeeccccCCcE------EEEEECCCCCEEEEEECCCcEE
Confidence 477899999999999876553 45566 2332222222222333334 7899999999999888766433
Q ss_pred CCCccCCCCC--CCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCce----EeccCCCCCCccceEEEeeCC
Q 003886 233 KPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV----QAVKGIPKSLSVGQVVWAPLN 306 (789)
Q Consensus 233 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~----~~l~~~~~~~~~~~~~wSPDg 306 (789)
.|...... .......+...+....|.++....+++..+..|.+||+.+++. ..+ ......+..++|+|||
T Consensus 87 --iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 87 --IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL--NSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp --EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE--CCCCSCEEEEEECSSS
T ss_pred --EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe--cCcCCCeEEEEECCCC
Confidence 23321111 1112233444455667888866666667788999999987642 223 2233457789999999
Q ss_pred CCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC---eeecCCCCCccCcceecCCC
Q 003886 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDG 383 (789)
Q Consensus 307 ~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~Lt~~~~~~~~p~~SpDG 383 (789)
+. |+..+. +..|.++|+ .++. ...+..+...+...+|||||
T Consensus 163 ~~----l~s~s~---------------d~~i~~w~~-----------------~~~~~~~~~~~~~h~~~v~~l~~sp~g 206 (345)
T 3fm0_A 163 EL----LASASY---------------DDTVKLYRE-----------------EEDDWVCCATLEGHESTVWSLAFDPSG 206 (345)
T ss_dssp SC----EEEEET---------------TSCEEEEEE-----------------ETTEEEEEEEECCCSSCEEEEEECTTS
T ss_pred CE----EEEEeC---------------CCcEEEEEe-----------------cCCCEEEEEEecCCCCceEEEEECCCC
Confidence 98 777663 224666665 2222 34566677778899999999
Q ss_pred CEEEEEecCCCCCCCCccccceeEEeecCCCCC-CCccc-ce---eeEEeeeeccCCCCCccccccCCCCCccccCCCEE
Q 003886 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLE-KI---VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 458 (789)
Q Consensus 384 ~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~-~~~t~-~~---~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l 458 (789)
++|+..+.+. .|.+||....+. ..+.. .. ...+.. +.+.....+..+.|++++..|
T Consensus 207 ~~l~s~s~D~-----------~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~h~~~v~~v~~~~~~~~l 267 (345)
T 3fm0_A 207 QRLASCSDDR-----------TVRIWRQYLPGNEQGVACSGSDPSWKCICT--------LSGFHSRTIYDIAWCQLTGAL 267 (345)
T ss_dssp SEEEEEETTS-----------CEEEEEEECTTCTTCCCCC---CEEEEEEE--------ECSSCSSCEEEEEECTTTCCE
T ss_pred CEEEEEeCCC-----------eEEEeccccCCCCccceeeccCCccceeEE--------ecCCCCCcEEEEEEecCCCEE
Confidence 9998877553 377777532221 11110 00 001110 011111234567899999855
Q ss_pred EEEEEeCCeEEEEEEECCCCc------E-EEecCC-CCCceeEEeeecCCEEEEEEeCCCC
Q 003886 459 LLSSIWGSSQVIISVNVSSGE------L-LRITPA-ESNFSWSLLTLDGDNIIAVSSSPVD 511 (789)
Q Consensus 459 ~~~~~~~~~~~l~~~dl~tg~------~-~~lt~~-~~~~~~~~~s~dg~~l~~~~ss~~~ 511 (789)
+++..++...+|.++..... . ..+... ...+....|+|++..++++++....
T Consensus 268 -~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 268 -ATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp -EEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred -EEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 56666777778876542211 1 111122 2244556788887666666665544
No 203
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.48 E-value=2.8e-13 Score=146.75 Aligned_cols=131 Identities=12% Similarity=0.119 Sum_probs=87.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-------hhHHHHH---HHHHCCcEEEEEcCCC-CCCCCchhh
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-------SYSKSLA---FLSSVGYSLLIVNYRG-SLGFGEEAL 640 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-------~~~~~~~---~la~~Gy~V~~~d~rG-s~G~G~~~~ 640 (789)
+|..++....-+. ...+.|+||++||.+.+.... .|..... .|+++||.|+++|+|| .++......
T Consensus 42 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 42 SYINVAYQTYGTL---NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CSEEEEEEEESCC---CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred cceeEEEEecccc---cccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcc
Confidence 4555554444332 222368999999987764320 1544442 3668899999999998 333221100
Q ss_pred -ccC-C----CCCCcccHHHHHHHHHHHHHcCCCCCccEE-EEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 641 -QSL-P----GKVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 641 -~~~-~----~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~-l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
... . ..+....++|+.+.+..+++. ++.+++. |+|||+||.+++.+|.++|++++++|+.+|...
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 190 (377)
T 2b61_A 119 INPQTGKPYGSQFPNIVVQDIVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIY 190 (377)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSS
T ss_pred cCccccccccccCCcccHHHHHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCcc
Confidence 000 0 001134678888888888776 4567888 999999999999999999999999999998643
No 204
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.48 E-value=1.3e-12 Score=137.91 Aligned_cols=119 Identities=18% Similarity=0.294 Sum_probs=82.0
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
.+|..++....-+. ..|.||++||++++.....+ ...+...||.|+++|+|| +|.+... ......
T Consensus 22 ~~g~~l~~~~~g~~------~g~~vvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G---~G~S~~~---~~~~~~ 86 (317)
T 1wm1_A 22 GDGHRIYWELSGNP------NGKPAVFIHGGPGGGISPHH---RQLFDPERYKVLLFDQRG---CGRSRPH---ASLDNN 86 (317)
T ss_dssp SSSCEEEEEEEECT------TSEEEEEECCTTTCCCCGGG---GGGSCTTTEEEEEECCTT---STTCBST---TCCTTC
T ss_pred CCCcEEEEEEcCCC------CCCcEEEECCCCCcccchhh---hhhccccCCeEEEECCCC---CCCCCCC---cccccc
Confidence 36777764443221 23668999998765322222 223445799999999998 5555321 111223
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
..+++.+.+..+++. ++.+++.|+|||+||.+++.+|.++|++++++|+.++..
T Consensus 87 ~~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 140 (317)
T 1wm1_A 87 TTWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 140 (317)
T ss_dssp SHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cHHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCC
Confidence 466666666666665 456789999999999999999999999999999988653
No 205
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.48 E-value=1.3e-11 Score=131.08 Aligned_cols=246 Identities=16% Similarity=0.131 Sum_probs=138.7
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
.+..++|||||++|++....+ +.-.+|.+. .+++...+..... ++.+ ..++|||||++|++....
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~s~dg~~l~~~~~~----- 104 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPE-FRVLAYRIAPDDGALTFAAESAL--PGSL------THISTDHQGQFVFVGSYN----- 104 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEEC--SSCC------SEEEECTTSSEEEEEETT-----
T ss_pred CCceEEECCCCCEEEEeecCC-CeEEEEEecCCCCceeecccccc--CCCC------cEEEEcCCCCEEEEEecC-----
Confidence 466789999999998877643 222333343 2455444433321 1112 689999999988776432
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCC---ceEeccCCCCCCccceEEEeeCCCCCc
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG---EVQAVKGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g---~~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
...|.+||+..+ +.... ......+..++|+|||+.
T Consensus 105 --------------------------------------~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~-- 142 (343)
T 1ri6_A 105 --------------------------------------AGNVSVTRLEDGLPVGVVDV--VEGLDGCHSANISPDNRT-- 142 (343)
T ss_dssp --------------------------------------TTEEEEEEEETTEEEEEEEE--ECCCTTBCCCEECTTSSE--
T ss_pred --------------------------------------CCeEEEEECCCCcccccccc--ccCCCCceEEEECCCCCE--
Confidence 256888888433 33333 233345678899999997
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCC-CCeee-----cCC-CCCccCcceecCCC
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVN-----LTE-SISSAFFPRFSPDG 383 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~-----Lt~-~~~~~~~p~~SpDG 383 (789)
|++.... ...|+++|+ .+ +.... +.. ........+|+|||
T Consensus 143 --l~~~~~~--------------~~~v~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 143 --LWVPALK--------------QDRICLFTV-----------------SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp --EEEEEGG--------------GTEEEEEEE-----------------CTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred --EEEecCC--------------CCEEEEEEe-----------------cCCCceeeecccccccCCCCCcceEEECCCC
Confidence 6554411 226888887 33 43321 221 12245568899999
Q ss_pred CEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEE
Q 003886 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 463 (789)
Q Consensus 384 ~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~ 463 (789)
++|++..... ..+.+||++....... ...... ..+. .+.+ ......+.|+|||+.|+++..
T Consensus 190 ~~l~~~~~~~----------~~i~~~~~~~~~g~~~---~~~~~~--~~~~--~~~~--~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 190 QYAYCVNELN----------SSVDVWELKDPHGNIE---CVQTLD--MMPE--NFSD--TRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp SEEEEEETTT----------TEEEEEESSCTTSCCE---EEEEEE--CSCT--TCCS--CCCEEEEEECTTSSEEEEEET
T ss_pred CEEEEEeCCC----------CEEEEEEecCCCCcEE---EEeecc--ccCc--cccc--cCCccceEECCCCCEEEEEec
Confidence 9887766332 3688888854211100 000011 0010 0100 001224789999998877665
Q ss_pred eCCeEEEEEEECCCCcEEEec--CCCCCceeEEeeecCCEEEEEEeC
Q 003886 464 WGSSQVIISVNVSSGELLRIT--PAESNFSWSLLTLDGDNIIAVSSS 508 (789)
Q Consensus 464 ~~~~~~l~~~dl~tg~~~~lt--~~~~~~~~~~~s~dg~~l~~~~ss 508 (789)
..+...+|.++..+++.+.+. ..........++++|+.+++....
T Consensus 251 ~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 251 TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTT
T ss_pred CCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCC
Confidence 556666665554466555442 222223456889999887766543
No 206
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.48 E-value=2.5e-12 Score=149.06 Aligned_cols=186 Identities=10% Similarity=0.012 Sum_probs=112.0
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (789)
..||||++++-.. ..+.+.++++....... ..+.... +.+...+|||||++||...... +....
T Consensus 66 ~~spdg~~lasg~---------~d~~v~lWd~~~~~~~~~~~~~~~~-----~~v~~v~fs~dg~~l~~~~~~~-~~~~~ 130 (611)
T 1nr0_A 66 KTSPSGYYCASGD---------VHGNVRIWDTTQTTHILKTTIPVFS-----GPVKDISWDSESKRIAAVGEGR-ERFGH 130 (611)
T ss_dssp EECTTSSEEEEEE---------TTSEEEEEESSSTTCCEEEEEECSS-----SCEEEEEECTTSCEEEEEECCS-SCSEE
T ss_pred EECCCCcEEEEEe---------CCCCEEEeECCCCcceeeEeecccC-----CceEEEEECCCCCEEEEEECCC-CceeE
Confidence 3479999886532 23456677663221111 1122222 4588999999999999876543 22234
Q ss_pred EEEecCCceeEEEecCCCccccccCCCcccceeecCCCCE-EEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 182 FELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL-IAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
..+|+.++....+ .+..+.| ..+.|+||++. |+..+.+.... .|+....+.......+..++....|+
T Consensus 131 v~~wd~~~~~~~l---~gh~~~v------~~v~f~p~~~~~l~s~s~D~~v~--lwd~~~~~~~~~l~~H~~~V~~v~fs 199 (611)
T 1nr0_A 131 VFLFDTGTSNGNL---TGQARAM------NSVDFKPSRPFRIISGSDDNTVA--IFEGPPFKFKSTFGEHTKFVHSVRYN 199 (611)
T ss_dssp EEETTTCCBCBCC---CCCSSCE------EEEEECSSSSCEEEEEETTSCEE--EEETTTBEEEEEECCCSSCEEEEEEC
T ss_pred EEEeeCCCCccee---cCCCCCc------eEEEECCCCCeEEEEEeCCCeEE--EEECCCCeEeeeeccccCceEEEEEC
Confidence 5566554432221 1222233 78999999974 77766665432 33322222222334566666677899
Q ss_pred CCcccccCCccCceEEEEEccCCceEeccCC------CCCCccceEEEeeCCCCCccEEEEEee
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQAVKGI------PKSLSVGQVVWAPLNEGLHQYLVFVGW 318 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~------~~~~~~~~~~wSPDg~~~~~~l~f~~~ 318 (789)
+|.....++..+..|.+||+.+++....... .....+..++|+|||+. |+..+.
T Consensus 200 pdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~----l~s~s~ 259 (611)
T 1nr0_A 200 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK----IASASA 259 (611)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE----EEEEET
T ss_pred CCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE----EEEEeC
Confidence 9865556677788999999988876543100 22346778999999998 776663
No 207
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.48 E-value=6.1e-14 Score=144.38 Aligned_cols=105 Identities=15% Similarity=0.217 Sum_probs=75.9
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
+.|+||++||.+.+ ...|......|.++||.|+++|+|| +|.+.... .......++++.+.+..+++. ++.
T Consensus 23 ~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~ 93 (279)
T 4g9e_A 23 EGAPLLMIHGNSSS--GAIFAPQLEGEIGKKWRVIAPDLPG---HGKSTDAI--DPDRSYSMEGYADAMTEVMQQ--LGI 93 (279)
T ss_dssp CEEEEEEECCTTCC--GGGGHHHHHSHHHHHEEEEEECCTT---STTSCCCS--CHHHHSSHHHHHHHHHHHHHH--HTC
T ss_pred CCCeEEEECCCCCc--hhHHHHHHhHHHhcCCeEEeecCCC---CCCCCCCC--CcccCCCHHHHHHHHHHHHHH--hCC
Confidence 56889999997764 5567777777777899999999998 44433110 011223466666666666665 345
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
+++.|+|||+||.+++.++.++|+ +.++|+.++.
T Consensus 94 ~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~ 127 (279)
T 4g9e_A 94 ADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTP 127 (279)
T ss_dssp CCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCC
T ss_pred CceEEEEECchHHHHHHHHhhCCc-ceeEEEecCC
Confidence 689999999999999999999998 5666555543
No 208
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.47 E-value=3.6e-12 Score=139.72 Aligned_cols=267 Identities=12% Similarity=0.090 Sum_probs=159.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
..+...+|||||++|+.....+ .+.+| ..++....+.. ..+.+ ..+.|+|||+.|+..+.+....
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~---~~~~v------~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENG-----ELRLWNKTGALLNVLNF---HRAPI------VSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECC---CCSCE------EEEEECTTSSEEEEEETTCCEE
T ss_pred CceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCeeeeccC---CCccE------EEEEECCCCCEEEEEecCCeEE
Confidence 3688999999999999876543 34555 44444443331 11222 7899999999999877654322
Q ss_pred CCCccCCCCCCCCCCcCCCC---------------CCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCcc
Q 003886 233 KPTFSLGSTKGGSSDKDCNS---------------WKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSV 297 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~ 297 (789)
.|+............... ......|.++ +..+.+..+..|++||+.+++..... ......+
T Consensus 175 --iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~-~~~~~~i 250 (425)
T 1r5m_A 175 --LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKL-IGHHGPI 250 (425)
T ss_dssp --EEETTTTEEEEEECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEE-CCCSSCE
T ss_pred --EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeee-ccCCCce
Confidence 232211111111111111 1334556665 44556666789999999987654331 2334467
Q ss_pred ceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcc
Q 003886 298 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFP 377 (789)
Q Consensus 298 ~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p 377 (789)
..++|+||++. |+..+ ....|+++|+. .......+..+...+...
T Consensus 251 ~~~~~~~~~~~----l~~~~---------------~d~~i~i~d~~----------------~~~~~~~~~~~~~~i~~~ 295 (425)
T 1r5m_A 251 SVLEFNDTNKL----LLSAS---------------DDGTLRIWHGG----------------NGNSQNCFYGHSQSIVSA 295 (425)
T ss_dssp EEEEEETTTTE----EEEEE---------------TTSCEEEECSS----------------SBSCSEEECCCSSCEEEE
T ss_pred EEEEECCCCCE----EEEEc---------------CCCEEEEEECC----------------CCccceEecCCCccEEEE
Confidence 88999999997 66655 23368888872 223345566566778899
Q ss_pred eecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCE
Q 003886 378 RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 457 (789)
Q Consensus 378 ~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~ 457 (789)
.|+||| .|+..+.+ ..|++||+.++...... .. ....+..+.|+|||+.
T Consensus 296 ~~~~~~-~l~~~~~d-----------~~i~i~d~~~~~~~~~~----------~~---------~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 296 SWVGDD-KVISCSMD-----------GSVRLWSLKQNTLLALS----------IV---------DGVPIFAGRISQDGQK 344 (425)
T ss_dssp EEETTT-EEEEEETT-----------SEEEEEETTTTEEEEEE----------EC---------TTCCEEEEEECTTSSE
T ss_pred EECCCC-EEEEEeCC-----------CcEEEEECCCCcEeEec----------cc---------CCccEEEEEEcCCCCE
Confidence 999999 66655543 36999998765432110 00 0012346789999986
Q ss_pred EEEEEEeCCeEEEEEEECCCCc--------------------E-EEecCCCC--CceeEEeeecCCEEEEEEe
Q 003886 458 MLLSSIWGSSQVIISVNVSSGE--------------------L-LRITPAES--NFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 458 l~~~~~~~~~~~l~~~dl~tg~--------------------~-~~lt~~~~--~~~~~~~s~dg~~l~~~~s 507 (789)
|+ ++..++...+| |+.+++ . ..+..... .+....|+++++.|+....
T Consensus 345 l~-~~~~dg~i~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 345 YA-VAFMDGQVNVY--DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS 414 (425)
T ss_dssp EE-EEETTSCEEEE--ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES
T ss_pred EE-EEECCCeEEEE--ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec
Confidence 64 45555555555 555555 3 33333322 4555678888886655443
No 209
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.47 E-value=4.8e-13 Score=140.89 Aligned_cols=119 Identities=18% Similarity=0.281 Sum_probs=81.8
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
.+|..++....-+. +.|.||++||++++.....+ ...+...||.|+++|+|| +|.+.... .....
T Consensus 19 ~~g~~l~y~~~G~~------~g~pvvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G---~G~S~~~~---~~~~~ 83 (313)
T 1azw_A 19 DDRHTLYFEQCGNP------HGKPVVMLHGGPGGGCNDKM---RRFHDPAKYRIVLFDQRG---SGRSTPHA---DLVDN 83 (313)
T ss_dssp SSSCEEEEEEEECT------TSEEEEEECSTTTTCCCGGG---GGGSCTTTEEEEEECCTT---STTSBSTT---CCTTC
T ss_pred CCCCEEEEEecCCC------CCCeEEEECCCCCccccHHH---HHhcCcCcceEEEECCCC---CcCCCCCc---ccccc
Confidence 36667765444321 23668999998765322221 223445799999999998 66553211 11223
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
..+++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++..
T Consensus 84 ~~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 84 TTWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp CHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 466666666666665 455789999999999999999999999999999988753
No 210
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.47 E-value=5.9e-13 Score=143.42 Aligned_cols=288 Identities=9% Similarity=0.039 Sum_probs=163.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCC-CeEEEEec--CCceeE-EEecCCCccccccCCCcccceeecCCCCEEEEEeecC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENES-PIQFELWS--QSQLEK-EFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 229 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~-~~~~~i~~--~~~~~~-~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~ 229 (789)
..+.+.+|||||++||..+.....- ..-..+|. .+.... +.......++.| ..++|+||++.|+ .+.+.
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V------~~~~~s~d~~~l~-~s~dg 115 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGV------TDVAWVSEKGILV-ASDSG 115 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCE------EEEEEETTTEEEE-EETTS
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCE------EEEEEcCCCCEEE-EECCC
Confidence 3588999999999999877542100 11233442 221110 000001111222 7899999997554 44444
Q ss_pred CCCCCCccCCCCCCCCC----CcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeC
Q 003886 230 SPSKPTFSLGSTKGGSS----DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 305 (789)
Q Consensus 230 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPD 305 (789)
.. ..|+....+.... ...+...+....|.++....+++..+..|.+||+.+++..... ......+..++|+|+
T Consensus 116 ~v--~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AV--ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY-NAHSSEVNCVAACPG 192 (357)
T ss_dssp CE--EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTT
T ss_pred EE--EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEccC
Confidence 32 2444322221111 1134444556678888666666777889999999998765441 223446778999999
Q ss_pred CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe-eec--CCCCCccCcceecCC
Q 003886 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL--TESISSAFFPRFSPD 382 (789)
Q Consensus 306 g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~L--t~~~~~~~~p~~SpD 382 (789)
++. ++.++. .+..|.++|+ .+++. ..+ ......+...+|+|+
T Consensus 193 ~~~----~~~s~~--------------~dg~v~~wd~-----------------~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 193 KDT----IFLSCG--------------EDGRILLWDT-----------------RKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp CSS----CEEEEE--------------TTSCEEECCT-----------------TSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred CCc----eeeeec--------------cCCceEEEEC-----------------CCCceeeeeeeccccccccchhhhhc
Confidence 986 555542 2236888887 33332 222 233445678899999
Q ss_pred CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEE
Q 003886 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 462 (789)
Q Consensus 383 G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~ 462 (789)
+..++.....+ ..|++||+.++......... ...+..+.|+||++.+++++
T Consensus 238 ~~~~la~g~~d----------~~i~~wd~~~~~~~~~~~~~-------------------~~~v~~l~~sp~~~~~lasg 288 (357)
T 4g56_B 238 KDDTFACGDET----------GNVSLVNIKNPDSAQTSAVH-------------------SQNITGLAYSYHSSPFLASI 288 (357)
T ss_dssp STTEEEEEESS----------SCEEEEESSCGGGCEEECCC-------------------SSCEEEEEECSSSSCCEEEE
T ss_pred ccceEEEeecc----------cceeEEECCCCcEeEEEecc-------------------ceeEEEEEEcCCCCCEEEEE
Confidence 76544433222 25899998775442111110 01244678999998777777
Q ss_pred EeCCeEEEEEEECCCCcEEEecCCCCCceeEEeee-cCCEEEEEEeCCCCCCeEEEEeec
Q 003886 463 IWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL-DGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 463 ~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~-dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
..++...|| |+.++++.+.......+....|+| +++. +++.+.... |.+.++.
T Consensus 289 s~D~~i~iw--d~~~~~~~~~~~H~~~V~~vafsP~d~~~-l~s~s~Dg~---v~iW~~~ 342 (357)
T 4g56_B 289 SEDCTVAVL--DADFSEVFRDLSHRDFVTGVAWSPLDHSK-FTTVGWDHK---VLHHHLP 342 (357)
T ss_dssp ETTSCEEEE--CTTSCEEEEECCCSSCEEEEEECSSSTTE-EEEEETTSC---EEEEECC
T ss_pred eCCCEEEEE--ECCCCcEeEECCCCCCEEEEEEeCCCCCE-EEEEcCCCe---EEEEECC
Confidence 776665555 788898877665444455567887 5554 445554433 5555553
No 211
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.47 E-value=2.1e-13 Score=142.36 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=86.9
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCc
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~ 649 (789)
..+|..++....- +.|+||++||.+.+ ...|......|++. |.|+++|+|| +|.+..... .....
T Consensus 15 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~~-~~~~~ 79 (302)
T 1mj5_A 15 EIKGRRMAYIDEG--------TGDPILFQHGNPTS--SYLWRNIMPHCAGL-GRLIACDLIG---MGDSDKLDP-SGPER 79 (302)
T ss_dssp EETTEEEEEEEES--------CSSEEEEECCTTCC--GGGGTTTGGGGTTS-SEEEEECCTT---STTSCCCSS-CSTTS
T ss_pred EECCEEEEEEEcC--------CCCEEEEECCCCCc--hhhhHHHHHHhccC-CeEEEEcCCC---CCCCCCCCC-CCccc
Confidence 3467777654432 24889999997764 44566566667655 8999999998 554432110 01222
Q ss_pred ccHHHHHHHHHHHHHcCCCCC-ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 650 QDVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~-~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
..++++.+.+..+++. ++. +++.|+|||+||.+++.++.++|++++++|+.+|...
T Consensus 80 ~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 136 (302)
T 1mj5_A 80 YAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAM 136 (302)
T ss_dssp SCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCS
T ss_pred ccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCC
Confidence 4577777777777665 345 7899999999999999999999999999999998653
No 212
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.47 E-value=5.2e-13 Score=138.66 Aligned_cols=120 Identities=17% Similarity=0.252 Sum_probs=84.6
Q ss_pred eecCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCC
Q 003886 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (789)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~ 647 (789)
+...+|..++...+-+.+ +.|.||++||.+.+ ...|......|++ ||.|+++|+|| +|.+.... ..
T Consensus 10 ~~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~~---~~ 75 (285)
T 3bwx_A 10 WTSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTRN--ARDFEDLATRLAG-DWRVLCPEMRG---RGDSDYAK---DP 75 (285)
T ss_dssp EECTTSCEEEEEEECBCT-----TSCCEEEECCTTCC--GGGGHHHHHHHBB-TBCEEEECCTT---BTTSCCCS---SG
T ss_pred eecCCCceEEEEEcCCCC-----CCCcEEEECCCCcc--hhhHHHHHHHhhc-CCEEEeecCCC---CCCCCCCC---Cc
Confidence 445578888877665431 25779999997764 5677777778876 89999999998 55543211 11
Q ss_pred CcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeC
Q 003886 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN 703 (789)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 703 (789)
....++++.+.+..+++. +..+++.|+|||+||.+++.+|.++|++++++|+.+
T Consensus 76 ~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 129 (285)
T 3bwx_A 76 MTYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLND 129 (285)
T ss_dssp GGCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred cccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEec
Confidence 123344444444444443 234689999999999999999999999999999865
No 213
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.47 E-value=6.5e-13 Score=137.22 Aligned_cols=103 Identities=20% Similarity=0.253 Sum_probs=79.3
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC-C
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN-P 670 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d-~ 670 (789)
.|.||++||.+.+ ...|......|+++||.|+++|+|| +|.+.... .....++++.+.+..+++. ++ .
T Consensus 4 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~rVia~Dl~G---~G~S~~~~----~~~~~~~~~a~dl~~~l~~--l~~~ 72 (273)
T 1xkl_A 4 GKHFVLVHGACHG--GWSWYKLKPLLEAAGHKVTALDLAA---SGTDLRKI----EELRTLYDYTLPLMELMES--LSAD 72 (273)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEECCCTT---STTCCCCG----GGCCSHHHHHHHHHHHHHT--SCSS
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHHhCCCEEEEecCCC---CCCCccCc----ccccCHHHHHHHHHHHHHH--hccC
Confidence 4789999997764 4567778889999999999999998 55543110 1123466666666666665 33 4
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
+++.|+||||||++++.++.++|++++++|+.++.
T Consensus 73 ~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~ 107 (273)
T 1xkl_A 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAF 107 (273)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCEEEEecCHHHHHHHHHHHhChHhheEEEEEecc
Confidence 78999999999999999999999999999998864
No 214
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.46 E-value=1.8e-12 Score=135.51 Aligned_cols=117 Identities=20% Similarity=0.347 Sum_probs=86.2
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....- ..|.||++||.+.+ ...|......|++. |.|+++|+|| +|.+... .........
T Consensus 17 ~g~~l~y~~~G--------~g~~lvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~-~~~~~~~~~ 81 (294)
T 1ehy_A 17 PDVKIHYVREG--------AGPTLLLLHGWPGF--WWEWSKVIGPLAEH-YDVIVPDLRG---FGDSEKP-DLNDLSKYS 81 (294)
T ss_dssp SSCEEEEEEEE--------CSSEEEEECCSSCC--GGGGHHHHHHHHTT-SEEEEECCTT---STTSCCC-CTTCGGGGC
T ss_pred CCEEEEEEEcC--------CCCEEEEECCCCcc--hhhHHHHHHHHhhc-CEEEecCCCC---CCCCCCC-ccccccCcC
Confidence 56666654321 24789999997764 56788788888776 9999999998 6655421 000011345
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
++++.+.+..+++. +..+++.|+|||+||.+++.+|.++|++++++|+.++.
T Consensus 82 ~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 133 (294)
T 1ehy_A 82 LDKAADDQAALLDA--LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPI 133 (294)
T ss_dssp HHHHHHHHHHHHHH--TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCS
T ss_pred HHHHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCC
Confidence 67777777766665 44578999999999999999999999999999999863
No 215
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.46 E-value=3.4e-13 Score=138.20 Aligned_cols=185 Identities=16% Similarity=0.139 Sum_probs=113.7
Q ss_pred CCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCC
Q 003886 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (789)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (789)
..+.|+||++||++.+ ...|......|++. |.|+++|+|| +|.+.... ...+++++.+.+..+++. +
T Consensus 17 ~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~-~~v~~~d~~G---~G~s~~~~-----~~~~~~~~~~~~~~~l~~--~ 83 (267)
T 3fla_A 17 PDARARLVCLPHAGGS--ASFFFPLAKALAPA-VEVLAVQYPG---RQDRRHEP-----PVDSIGGLTNRLLEVLRP--F 83 (267)
T ss_dssp TTCSEEEEEECCTTCC--GGGGHHHHHHHTTT-EEEEEECCTT---SGGGTTSC-----CCCSHHHHHHHHHHHTGG--G
T ss_pred CCCCceEEEeCCCCCC--chhHHHHHHHhccC-cEEEEecCCC---CCCCCCCC-----CCcCHHHHHHHHHHHHHh--c
Confidence 4567999999997664 56777777777655 9999999998 66554221 123466666666666554 3
Q ss_pred CCccEEEEEcCccHHHHHHHHHhCCCc----eeEEEEeCCccchhhhhcC-CCCCcchhhhhccCcc-c-cccCCCCC--
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGT-TDIPDWCYVESYGSKG-K-DSFTESPS-- 739 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~~~p~~----~~a~v~~~pv~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~-- 739 (789)
+.+++.|+|||+||++++.++.++|++ ++++|+.++.......... .......+...+.... . ......+.
T Consensus 84 ~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
T 3fla_A 84 GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPELL 163 (267)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHH
T ss_pred CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHHH
Confidence 568899999999999999999999986 8899988765421111000 0000000000000000 0 00000000
Q ss_pred -------hhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 740 -------VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 740 -------~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.........+.... ..++++|+|+++|++|..+|++.+..+.+.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 217 (267)
T 3fla_A 164 AMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG 217 (267)
T ss_dssp HHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS
T ss_pred HHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC
Confidence 00111111222211 267899999999999999999999998887765
No 216
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.46 E-value=9.6e-13 Score=139.13 Aligned_cols=115 Identities=20% Similarity=0.260 Sum_probs=84.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....-+ ++.|.||++||.+.+ ...|......|++. |.|+++|+|| +|.+... . ....
T Consensus 15 ~g~~l~y~~~G~------g~~~pvvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~---~--~~~~ 77 (316)
T 3afi_E 15 LGSSMAYRETGA------QDAPVVLFLHGNPTS--SHIWRNILPLVSPV-AHCIAPDLIG---FGQSGKP---D--IAYR 77 (316)
T ss_dssp TTEEEEEEEESC------TTSCEEEEECCTTCC--GGGGTTTHHHHTTT-SEEEEECCTT---STTSCCC---S--SCCC
T ss_pred CCEEEEEEEeCC------CCCCeEEEECCCCCc--hHHHHHHHHHHhhC-CEEEEECCCC---CCCCCCC---C--CCCC
Confidence 566665544321 223589999998774 55677777778654 9999999998 6665321 1 1345
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
++++.+.+..+++. ++.+++.|+|||+||.+++.+|.++|++++++|+.++.
T Consensus 78 ~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 129 (316)
T 3afi_E 78 FFDHVRYLDAFIEQ--RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFI 129 (316)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHH--cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccC
Confidence 67777777766665 44578999999999999999999999999999998763
No 217
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.46 E-value=4.3e-12 Score=139.03 Aligned_cols=295 Identities=7% Similarity=0.047 Sum_probs=167.7
Q ss_pred cCCCCCceEEEEEeec--hhhcccceeEEEEEEeecCCCC-ccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCC
Q 003886 103 SGNGNGTQAMFSISQP--NLLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 179 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 179 (789)
.+||||+.+.++-+.. .+........+.++++...... ........ ..+..++|||||++|+.....+
T Consensus 19 ~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg---- 89 (416)
T 2pm9_A 19 AWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVD-----SKFNDLDWSHNNKIIAGALDNG---- 89 (416)
T ss_dssp CBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCS-----SCEEEEEECSSSSCEEEEESSS----
T ss_pred eeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecC-----CceEEEEECCCCCeEEEEccCC----
Confidence 3579998554543110 0011123456677766433211 11111111 4588999999999999876543
Q ss_pred eEEEEecCCc----eeEEEecCCCccccccCCCcccceeecCC-CCEEEEEeecCCCCCCCccCCCCC------CC---C
Q 003886 180 IQFELWSQSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIAYVAEEPSPSKPTFSLGSTK------GG---S 245 (789)
Q Consensus 180 ~~~~i~~~~~----~~~~~~~~~~~~g~v~~d~~~~~~~wSpD-g~~la~~~~~~~~~~~~~~~~~~~------~~---~ 245 (789)
...+|+-.. ...+..+. ...+.| ..+.|+|| ++.|+..+.+.... .|+..... .. .
T Consensus 90 -~v~vw~~~~~~~~~~~~~~~~-~h~~~v------~~~~~~~~~~~~l~s~~~dg~v~--iwd~~~~~~~~~~~~~~~~~ 159 (416)
T 2pm9_A 90 -SLELYSTNEANNAINSMARFS-NHSSSV------KTVKFNAKQDNVLASGGNNGEIF--IWDMNKCTESPSNYTPLTPG 159 (416)
T ss_dssp -CEEEECCSSTTSCCCEEEECC-CSSSCC------CEEEECSSSTTBEEEECSSSCEE--BCBTTTTSSCTTTCCCBCCC
T ss_pred -eEEEeecccccccccchhhcc-CCccce------EEEEEcCCCCCEEEEEcCCCeEE--EEECCCCccccccccccccc
Confidence 355662111 11222221 222233 78999999 77777776655432 34322222 11 1
Q ss_pred CCcCCCCCCCcceeeCCccc-ccCCccCceEEEEEccCCceEeccCCCC-----CCccceEEEeeCCCCCccEEEEEeec
Q 003886 246 SDKDCNSWKGQGDWEEDWGE-TYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGLHQYLVFVGWS 319 (789)
Q Consensus 246 ~~~~~~~~~~~~~~~~d~g~-~~~~~~~~~l~v~d~~~g~~~~l~~~~~-----~~~~~~~~wSPDg~~~~~~l~f~~~~ 319 (789)
....+........|.++.+. .+++..+..|.+||+.+++......... ...+..++|+|||+. +++++..
T Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~l~~~~~ 235 (416)
T 2pm9_A 160 QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST----RVATATG 235 (416)
T ss_dssp CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT----EEEEEEC
T ss_pred cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCC----EEEEEEC
Confidence 11234444556678887433 3445567889999999887654421221 456789999999976 6666532
Q ss_pred CCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCC-CCeeecC-CCCCccCcceecC-CCCEEEEEecCCCCC
Q 003886 320 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLT-ESISSAFFPRFSP-DGKFLVFLSAKSSVD 396 (789)
Q Consensus 320 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt-~~~~~~~~p~~Sp-DG~~la~~s~~~~~~ 396 (789)
.. ....|+++|+. .. .....+. .+...+...+||| ||+.|+..+.+.
T Consensus 236 d~-----------~~~~i~~~d~~----------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg--- 285 (416)
T 2pm9_A 236 SD-----------NDPSILIWDLR----------------NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN--- 285 (416)
T ss_dssp CS-----------SSCCCCEEETT----------------STTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS---
T ss_pred CC-----------CCceEEEEeCC----------------CCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC---
Confidence 21 11257788872 21 2334455 5667788999999 899888776542
Q ss_pred CCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECC
Q 003886 397 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 476 (789)
Q Consensus 397 ~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~ 476 (789)
.|++||+.+++.... + .. ....+..+.|+||+..+++++..++...|| |+.
T Consensus 286 --------~v~~wd~~~~~~~~~---------~-~~---------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw--~~~ 336 (416)
T 2pm9_A 286 --------TVLLWNPESAEQLSQ---------F-PA---------RGNWCFKTKFAPEAPDLFACASFDNKIEVQ--TLQ 336 (416)
T ss_dssp --------EEEEECSSSCCEEEE---------E-EC---------SSSCCCCEEECTTCTTEEEECCSSSEEEEE--ESC
T ss_pred --------CEEEeeCCCCcccee---------e-cC---------CCCceEEEEECCCCCCEEEEEecCCcEEEE--Ecc
Confidence 599999877543211 0 00 012356788999995466666666666665 444
Q ss_pred CCc
Q 003886 477 SGE 479 (789)
Q Consensus 477 tg~ 479 (789)
+++
T Consensus 337 ~~~ 339 (416)
T 2pm9_A 337 NLT 339 (416)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 218
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.46 E-value=3.6e-12 Score=134.96 Aligned_cols=279 Identities=9% Similarity=0.010 Sum_probs=170.1
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~ 234 (789)
.+..++|||||+.+++....+ .+ ..+......+..... ...+.| ..++|+|||+.|+... +.. ..
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~----~~-~~~~~~~~~~~~~~~-~h~~~v------~~~~~~~~~~~l~~~~-dg~--i~ 75 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPD----AL-IGPGIPRHARQINTL-NHGEVV------CAVTISNPTRHVYTGG-KGC--VK 75 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTT----SS-SSTTCCSEEEEEEEE-CCSSCC------CEEEECSSSSEEEEEC-BSE--EE
T ss_pred ceeEEEECCCCCEEEeecCCC----cE-eccccCCccccceec-cCCCce------EEEEEecCCcEEEEcC-CCe--EE
Confidence 477899999999998765433 11 223222222222211 112223 7899999999999876 432 22
Q ss_pred CccCCCCCCCCCCc-----CCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccC-CCCCCccceEEEeeCCCC
Q 003886 235 TFSLGSTKGGSSDK-----DCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEG 308 (789)
Q Consensus 235 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~-~~~~~~~~~~~wSPDg~~ 308 (789)
.|+........... .+........|.++....+.+..+..|.+||+.+++...... ......+..+.|+||++.
T Consensus 76 iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 155 (337)
T 1gxr_A 76 VWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKV 155 (337)
T ss_dssp EEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSE
T ss_pred EEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCE
Confidence 34432222221111 233344456788876555666667899999999887322210 223345678999999987
Q ss_pred CccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecCCCCEEE
Q 003886 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLV 387 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~~la 387 (789)
|+..+ ....|+++|+ .++ ....+..+...+....|+|||+.|+
T Consensus 156 ----l~~~~---------------~dg~v~~~d~-----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 199 (337)
T 1gxr_A 156 ----CFSCC---------------SDGNIAVWDL-----------------HNQTLVRQFQGHTDGASCIDISNDGTKLW 199 (337)
T ss_dssp ----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ----EEEEe---------------CCCcEEEEeC-----------------CCCceeeeeecccCceEEEEECCCCCEEE
Confidence 66655 2336888888 333 3455666667788999999999988
Q ss_pred EEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCe
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 467 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~ 467 (789)
..+.+. .|++||+.++..... ... ...+..+.|+|||+.|++. ..++
T Consensus 200 ~~~~dg-----------~i~~~d~~~~~~~~~----------~~~----------~~~v~~~~~s~~~~~l~~~-~~~~- 246 (337)
T 1gxr_A 200 TGGLDN-----------TVRSWDLREGRQLQQ----------HDF----------TSQIFSLGYCPTGEWLAVG-MESS- 246 (337)
T ss_dssp EEETTS-----------EEEEEETTTTEEEEE----------EEC----------SSCEEEEEECTTSSEEEEE-ETTS-
T ss_pred EEecCC-----------cEEEEECCCCceEee----------ecC----------CCceEEEEECCCCCEEEEE-cCCC-
Confidence 776442 599999877543211 000 0123467899999977544 4344
Q ss_pred EEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 468 QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 468 ~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
.++.+|+.+++...+...........++++++.++....+ ..+.+.++..
T Consensus 247 -~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~ 296 (337)
T 1gxr_A 247 -NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD----NLLNAWRTPY 296 (337)
T ss_dssp -CEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT----SEEEEEETTT
T ss_pred -cEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCC----CcEEEEECCC
Confidence 3666688888887776655556667888988876654432 2466666543
No 219
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.46 E-value=7.6e-12 Score=143.70 Aligned_cols=264 Identities=18% Similarity=0.151 Sum_probs=164.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
..+...+|+|||+.|+.....+ .+.+| ..++..+... +..+.| ..++|+|||+.|+..+.+...+
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~-----~i~~w~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDK-----TVKLWNRNGQLLQTLT---GHSSSV------WGVAFSPDGQTIASASDDKTVK 328 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEEC---CCSSCE------EEEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEe---cCCCCe------EEEEECCCCCEEEEEeCCCeEE
Confidence 4577899999999998876654 35666 4444444332 222222 6899999999999887665432
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (789)
.|+... ........+........|.++......+.....|.+||..+.....+ ......+..++|+|||+.
T Consensus 329 --~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~dg~~---- 399 (577)
T 2ymu_A 329 --LWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVRGVAFSPDGQT---- 399 (577)
T ss_dssp --EEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEE--ECCSSCEEEEEECTTSSC----
T ss_pred --EEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEe--cCCCCCeEEEEECCCCCE----
Confidence 233211 11111112222223456777755555566678899999766555666 233456778999999998
Q ss_pred EEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecC
Q 003886 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (789)
Q Consensus 313 l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~ 392 (789)
|+..+. +..|.++|. .+.....+..+...+...+|||||+.|+..+.+
T Consensus 400 l~~~~~---------------d~~v~~~~~-----------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 400 IASASD---------------DKTVKLWNR-----------------NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EEEEET---------------TSEEEEECT-----------------TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEeC---------------CCEEEEEeC-----------------CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 887662 235777776 455566777777778889999999999877754
Q ss_pred CCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003886 393 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (789)
Q Consensus 393 ~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (789)
. .|.+||..+.....+.. ....+..+.|+|||+.| +++..++...||
T Consensus 448 ~-----------~v~~w~~~~~~~~~~~~--------------------~~~~v~~~~~spd~~~l-as~~~d~~i~iw- 494 (577)
T 2ymu_A 448 K-----------TVKLWNRNGQLLQTLTG--------------------HSSSVRGVAFSPDGQTI-ASASDDKTVKLW- 494 (577)
T ss_dssp S-----------EEEEEETTSCEEEEEEC--------------------CSSCEEEEEECTTSCEE-EEEETTSEEEEE-
T ss_pred C-----------EEEEEECCCCEEEEEcC--------------------CCCCEEEEEEcCCCCEE-EEEeCCCEEEEE-
Confidence 3 58888864321111100 01124467899999865 455556655555
Q ss_pred EECCCCcEEEecCCCCCceeEEeeecCCEEEEEE
Q 003886 473 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 473 ~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ 506 (789)
|..+..++.+......+....|+++|+.|+...
T Consensus 495 -~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 495 -NRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp -ETTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred -cCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 664444455554444555668899998776544
No 220
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.46 E-value=4e-13 Score=138.26 Aligned_cols=102 Identities=17% Similarity=0.257 Sum_probs=78.3
Q ss_pred cEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCcc
Q 003886 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (789)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (789)
|.||++||.+.+ ...|......|++. |.|+++|+|| +|.+.... . . ...++++.+.+..+++. ++.++
T Consensus 17 ~~vvllHG~~~~--~~~~~~~~~~L~~~-~~vi~~Dl~G---~G~S~~~~--~-~-~~~~~~~~~dl~~~l~~--l~~~~ 84 (269)
T 2xmz_A 17 QVLVFLHGFLSD--SRTYHNHIEKFTDN-YHVITIDLPG---HGEDQSSM--D-E-TWNFDYITTLLDRILDK--YKDKS 84 (269)
T ss_dssp EEEEEECCTTCC--GGGGTTTHHHHHTT-SEEEEECCTT---STTCCCCT--T-S-CCCHHHHHHHHHHHHGG--GTTSE
T ss_pred CeEEEEcCCCCc--HHHHHHHHHHHhhc-CeEEEecCCC---CCCCCCCC--C-C-ccCHHHHHHHHHHHHHH--cCCCc
Confidence 469999997764 45676677778765 9999999998 55544211 1 0 23566777766666665 45678
Q ss_pred EEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 673 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 673 v~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
+.|+|||+||.+++.+|.++|++++++|+.++..
T Consensus 85 ~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 118 (269)
T 2xmz_A 85 ITLFGYSMGGRVALYYAINGHIPISNLILESTSP 118 (269)
T ss_dssp EEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCS
T ss_pred EEEEEECchHHHHHHHHHhCchheeeeEEEcCCc
Confidence 9999999999999999999999999999998754
No 221
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.45 E-value=7e-13 Score=135.66 Aligned_cols=103 Identities=18% Similarity=0.195 Sum_probs=79.1
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC-C
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN-P 670 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d-~ 670 (789)
.|.||++||.+++ ...|......|+++||.|+++|+|| +|.+.... .....+++..+.+..+++. ++ .
T Consensus 3 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~----~~~~~~~~~a~dl~~~l~~--l~~~ 71 (257)
T 3c6x_A 3 FAHFVLIHTICHG--AWIWHKLKPLLEALGHKVTALDLAA---SGVDPRQI----EEIGSFDEYSEPLLTFLEA--LPPG 71 (257)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSCCG----GGCCSHHHHTHHHHHHHHT--SCTT
T ss_pred CCcEEEEcCCccC--cCCHHHHHHHHHhCCCEEEEeCCCC---CCCCCCCc----ccccCHHHHHHHHHHHHHh--cccc
Confidence 3679999997754 5568778889999999999999998 55543110 1123466666666666665 32 4
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
+++.|+||||||++++.++.++|++++++|+.++.
T Consensus 72 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~ 106 (257)
T 3c6x_A 72 EKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSV 106 (257)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCeEEEEECcchHHHHHHHHhCchhhheEEEEecc
Confidence 68999999999999999999999999999998764
No 222
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.7e-11 Score=136.29 Aligned_cols=262 Identities=12% Similarity=0.036 Sum_probs=150.2
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec-CCceeEEEec---CCCccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHV---PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~-~~~~~~~~~~---~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
.+..++|||||++|+++...+ +.-.+|.+.. .++..+.+.. ...+ ..+.|+|||+.|+....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v----------~~~~~sp~~~~l~~~~~--- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKRFCFSKRP----------NAISIAEDDTTVIIADK--- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEEEECSSCE----------EEEEECTTSSEEEEEET---
T ss_pred ceEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeecccCCCCc----------eEEEEcCCCCEEEEEeC---
Confidence 478899999999986555432 3333333331 4555554432 2222 68999999999988633
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEe--ccC-CCCCCccceEEEeeC--
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA--VKG-IPKSLSVGQVVWAPL-- 305 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~--l~~-~~~~~~~~~~~wSPD-- 305 (789)
...+++|++.+++... +.. ......+..++|+||
T Consensus 170 -----------------------------------------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 208 (450)
T 2vdu_B 170 -----------------------------------------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSD 208 (450)
T ss_dssp -----------------------------------------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTT
T ss_pred -----------------------------------------CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCC
Confidence 2568899988776542 100 112345778999999
Q ss_pred -CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eee-cCCCCCccCcceecCC
Q 003886 306 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN-LTESISSAFFPRFSPD 382 (789)
Q Consensus 306 -g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-Lt~~~~~~~~p~~SpD 382 (789)
++. |+..+ ....|+++|+ .++. ... +..+...+..++|| |
T Consensus 209 ~~~~----l~s~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~h~~~v~~~~~s-d 251 (450)
T 2vdu_B 209 GHQF----IITSD---------------RDEHIKISHY-----------------PQCFIVDKWLFGHKHFVSSICCG-K 251 (450)
T ss_dssp SCEE----EEEEE---------------TTSCEEEEEE-----------------SCTTCEEEECCCCSSCEEEEEEC-S
T ss_pred CCcE----EEEEc---------------CCCcEEEEEC-----------------CCCceeeeeecCCCCceEEEEEC-C
Confidence 776 65554 2236888887 3333 334 55667778999999 9
Q ss_pred CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccC--CCCC----ccccccCCCCCccccCCC
Q 003886 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE--GDCF----PGLYSSSILSNPWLSDGC 456 (789)
Q Consensus 383 G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~--~~~f----~g~~~~~~~~~~ws~Dg~ 456 (789)
|++|+..+.+ ..|.+||+.++...........+..+..... ...| .......+..+.|+||++
T Consensus 252 ~~~l~s~~~d-----------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 252 DYLLLSAGGD-----------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp TTEEEEEESS-----------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred CCEEEEEeCC-----------CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 9999877744 2699999988654211110000000000000 0000 000112345678999999
Q ss_pred EEEEEEEeCCeEEEEEE-ECCCCcEEEe--cCCCCCceeEEeeecCCEEEEEEeCCCCCC------eEEEEeec
Q 003886 457 TMLLSSIWGSSQVIISV-NVSSGELLRI--TPAESNFSWSLLTLDGDNIIAVSSSPVDVP------QVKYGYFV 521 (789)
Q Consensus 457 ~l~~~~~~~~~~~l~~~-dl~tg~~~~l--t~~~~~~~~~~~s~dg~~l~~~~ss~~~p~------~i~~~~~~ 521 (789)
.|++....++...||.+ +..+++++.+ ......+....+++ +.++++..+...|. .+|.++..
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 88766546676777766 3333333322 22223333345555 56777777766664 67766644
No 223
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.45 E-value=4e-13 Score=140.21 Aligned_cols=114 Identities=11% Similarity=0.169 Sum_probs=86.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....- ..|+||++||++.+ ...|......|+++ |.|+++|+|| +|.+... .....
T Consensus 18 ~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~-----~~~~~ 78 (301)
T 3kda_A 18 DGVKLHYVKGG--------QGPLVMLVHGFGQT--WYEWHQLMPELAKR-FTVIAPDLPG---LGQSEPP-----KTGYS 78 (301)
T ss_dssp TTEEEEEEEEE--------SSSEEEEECCTTCC--GGGGTTTHHHHTTT-SEEEEECCTT---STTCCCC-----SSCSS
T ss_pred CCeEEEEEEcC--------CCCEEEEECCCCcc--hhHHHHHHHHHHhc-CeEEEEcCCC---CCCCCCC-----CCCcc
Confidence 67777755442 35789999998765 56677778888888 9999999998 5554322 12334
Q ss_pred HHHHHHHHHHHHHcCCCCCcc-EEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 652 VNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~r-v~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++++.+.+..+++. ++.++ +.|+|||+||.+++.++.++|++++++|+.+|..
T Consensus 79 ~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 132 (301)
T 3kda_A 79 GEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPI 132 (301)
T ss_dssp HHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCC
Confidence 66666666666654 34567 9999999999999999999999999999999853
No 224
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.45 E-value=1.5e-11 Score=131.46 Aligned_cols=244 Identities=14% Similarity=0.087 Sum_probs=133.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEec---CCCccccccCCCcccceeecCCCCEEEEEeecC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV---PQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 229 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~---~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~ 229 (789)
.....++|||||+ |+++...+ +...++.+. .+++.+.+... .... ..++|||||++|++....
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p----------~~~a~spdg~~l~~~~~~- 106 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKED-DEGGIAAWQIDGQTAHKLNTVVAPGTPP----------AYVAVDEARQLVYSANYH- 106 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEET-TEEEEEEEEEETTEEEEEEEEEEESCCC----------SEEEEETTTTEEEEEETT-
T ss_pred CCcceEEEccCCe-EEEEEecC-CCceEEEEEecCCcEEEeeeeecCCCCC----------EEEEECCCCCEEEEEeCC-
Confidence 3456789999999 76665431 223454444 45555444432 1222 679999999988876432
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEcc-CCceEeccC--CCC--------CCccc
Q 003886 230 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVKG--IPK--------SLSVG 298 (789)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~~~~l~~--~~~--------~~~~~ 298 (789)
...|.+|++. +|+.+.+.. ..+ ...+.
T Consensus 107 ------------------------------------------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~ 144 (347)
T 3hfq_A 107 ------------------------------------------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH 144 (347)
T ss_dssp ------------------------------------------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE
T ss_pred ------------------------------------------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce
Confidence 2456777763 444433310 110 11345
Q ss_pred eEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec---CCC-CCcc
Q 003886 299 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL---TES-ISSA 374 (789)
Q Consensus 299 ~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L---t~~-~~~~ 374 (789)
.++|+|||+ +++... ....|+++++. .++....+ ... ....
T Consensus 145 ~~~~spdg~-----l~v~~~--------------~~~~v~~~~~~----------------~~g~~~~~~~~~~~~g~~p 189 (347)
T 3hfq_A 145 YTDLTPDNR-----LAVIDL--------------GSDKVYVYNVS----------------DAGQLSEQSVLTMEAGFGP 189 (347)
T ss_dssp EEEECTTSC-----EEEEET--------------TTTEEEEEEEC----------------TTSCEEEEEEEECCTTCCE
T ss_pred EEEECCCCc-----EEEEeC--------------CCCEEEEEEEC----------------CCCcEEEeeeEEcCCCCCC
Confidence 689999998 444331 12257777772 13433322 111 1234
Q ss_pred CcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCC--CCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccc
Q 003886 375 FFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 452 (789)
Q Consensus 375 ~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~--~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws 452 (789)
...+|||||++|++..... ..+.+|+++. +.... +..+...+. .+.+. .....+.|+
T Consensus 190 ~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~~~g~~~~-------~~~~~~~~~--~~~~~--~~~~~i~~s 248 (347)
T 3hfq_A 190 RHLVFSPDGQYAFLAGELS----------SQIASLKYDTQTGAFTQ-------LGIVKTIPA--DYTAH--NGAAAIRLS 248 (347)
T ss_dssp EEEEECTTSSEEEEEETTT----------TEEEEEEEETTTTEEEE-------EEEEESSCT--TCCSC--CEEEEEEEC
T ss_pred ceEEECCCCCEEEEEeCCC----------CEEEEEEecCCCCceEE-------eeeeeecCC--CCCCC--CcceeEEEC
Confidence 5679999999887765433 3566676653 22110 111110110 01000 012357899
Q ss_pred cCCCEEEEEEEeCCeEEEEEEECCCCcEEEec---CCCCCceeEEeeecCCEEEEEEeCC
Q 003886 453 SDGCTMLLSSIWGSSQVIISVNVSSGELLRIT---PAESNFSWSLLTLDGDNIIAVSSSP 509 (789)
Q Consensus 453 ~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt---~~~~~~~~~~~s~dg~~l~~~~ss~ 509 (789)
|||++||++....+...+|.++. +|+.+.+. ..........|++||++|++.....
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTA-DGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECG-GGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTT
T ss_pred CCCCEEEEEeCCCCEEEEEEECC-CCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCC
Confidence 99999988766666666776653 34444332 2122234568999999887666543
No 225
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.44 E-value=1e-12 Score=139.96 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=78.5
Q ss_pred CCcEEEEEcCCCCCCCc-hhhHHHHHHHHHCCcEEEEEcCCC-CCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCC
Q 003886 591 CDPLIVVLHGGPHSVSL-SSYSKSLAFLSSVGYSLLIVNYRG-SLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~-~~~~~~~~~la~~Gy~V~~~d~rG-s~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (789)
..|+||++||.+.+... ..|......| +.||.|+++|+|. ..|+|.+.. ....+|+.+.++++.+. +
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~--------~~~~~d~~~~~~~l~~~--l 105 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDH--------AHDAEDVDDLIGILLRD--H 105 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCH--------HHHHHHHHHHHHHHHHH--S
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCccc--------cCcHHHHHHHHHHHHHH--c
Confidence 46889999996654222 2345556667 7899999996531 133665432 12367888889988875 5
Q ss_pred CCccEEEEEcCccHHHHHHHHH--hCCCceeEEEEeCCccc
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIG--QAPDKFVAAAARNPLCN 707 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~--~~p~~~~a~v~~~pv~~ 707 (789)
+.+++.|+||||||++++.++. .+|++++++|+.+|..+
T Consensus 106 ~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 106 CMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp CCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred CCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 6789999999999999999998 57999999999988653
No 226
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.44 E-value=3.3e-13 Score=139.19 Aligned_cols=187 Identities=16% Similarity=0.177 Sum_probs=110.2
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCc
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (789)
.|.||++||.+.+ ...|......|++ +|.|+++|+|| +|.+...... ......+++..+.+..+++. ++.+
T Consensus 20 ~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~~~~-~~~~~~~~~~a~dl~~~l~~--l~~~ 90 (271)
T 1wom_A 20 KASIMFAPGFGCD--QSVWNAVAPAFEE-DHRVILFDYVG---SGHSDLRAYD-LNRYQTLDGYAQDVLDVCEA--LDLK 90 (271)
T ss_dssp SSEEEEECCTTCC--GGGGTTTGGGGTT-TSEEEECCCSC---CSSSCCTTCC-TTGGGSHHHHHHHHHHHHHH--TTCS
T ss_pred CCcEEEEcCCCCc--hhhHHHHHHHHHh-cCeEEEECCCC---CCCCCCCccc-ccccccHHHHHHHHHHHHHH--cCCC
Confidence 3789999996654 4566666667765 69999999998 5554321100 01112455555555555554 3457
Q ss_pred cEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhh----hhcCCCCCcc-hhhhhccC-------ccccccCCC-C
Q 003886 672 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----MVGTTDIPDW-CYVESYGS-------KGKDSFTES-P 738 (789)
Q Consensus 672 rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~----~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~-~ 738 (789)
++.|+|||+||.+++.++.++|++++++|+.++...... +......... .....+.. ......... .
T Consensus 91 ~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (271)
T 1wom_A 91 ETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPD 170 (271)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTT
T ss_pred CeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 899999999999999999999999999999987521100 0000000000 00000000 000000000 0
Q ss_pred ChhhHHH-------------------HHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 739 SVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 739 ~~~~~~~-------------------~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
..+..+. ....+....+.++++|+|+++|++|..+|++.+..+.+.+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~ 238 (271)
T 1wom_A 171 RPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPY 238 (271)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSSS
T ss_pred chHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCCC
Confidence 0000000 011122234678999999999999999999999999888765
No 227
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.44 E-value=2.5e-12 Score=136.18 Aligned_cols=235 Identities=14% Similarity=0.111 Sum_probs=150.6
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEec-CCCccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~-~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
..+....|+|++..++..+... .+.+|+ .++..+.+.. ...+ ..+.|||||+.|+..+.+..
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~-----~i~lWd~~~~~~~~~~~~~~~~~----------~~~~~spdg~~l~~g~~dg~ 145 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDA-----HIRLWDLENGKQIKSIDAGPVDA----------WTLAFSPDSQYLATGTHVGK 145 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCTTCC----------CCEEECTTSSEEEEECTTSE
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCEEEEEeCCCccE----------EEEEECCCCCEEEEEcCCCc
Confidence 4588899999999998776554 566773 4444433332 1122 67999999999998765543
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCc
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
.. .|.............+........|.++.....++..+..|.+||+.+++..... ......+..++|+|||+.
T Consensus 146 v~--i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spd~~~-- 220 (321)
T 3ow8_A 146 VN--IFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL-- 220 (321)
T ss_dssp EE--EEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCCCEEEECTTSCE--
T ss_pred EE--EEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-cccCCceeEEEEcCCCCE--
Confidence 21 2222211111111222333445678888666666667889999999998765431 223446789999999997
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEe
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s 390 (789)
|+..+ .+..|.++|+. .......+..+...+...+|+|||+.|+..+
T Consensus 221 --l~s~s---------------~dg~i~iwd~~----------------~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 221 --LVTAS---------------DDGYIKIYDVQ----------------HANLAGTLSGHASWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp --EEEEC---------------TTSCEEEEETT----------------TCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred --EEEEc---------------CCCeEEEEECC----------------CcceeEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 66655 22368888872 2334456777777788999999999988777
Q ss_pred cCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEE
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (789)
.+. .|.+||+.++.......+. ...+..+.|+|||+.| +++..++...|
T Consensus 268 ~D~-----------~v~iwd~~~~~~~~~~~~h-------------------~~~v~~v~~s~~g~~l-~s~~~d~~i~v 316 (321)
T 3ow8_A 268 SDK-----------SVKVWDVGTRTCVHTFFDH-------------------QDQVWGVKYNGNGSKI-VSVGDDQEIHI 316 (321)
T ss_dssp TTS-----------CEEEEETTTTEEEEEECCC-------------------SSCEEEEEECTTSSEE-EEEETTCCEEE
T ss_pred CCC-----------cEEEEeCCCCEEEEEEcCC-------------------CCcEEEEEECCCCCEE-EEEeCCCeEEE
Confidence 543 5899998765432110000 0124467899999866 56666777777
Q ss_pred EE
Q 003886 471 IS 472 (789)
Q Consensus 471 ~~ 472 (789)
|.
T Consensus 317 wd 318 (321)
T 3ow8_A 317 YD 318 (321)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 228
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.44 E-value=1.1e-13 Score=148.82 Aligned_cols=108 Identities=13% Similarity=0.191 Sum_probs=80.1
Q ss_pred CCcEEEEEcCCCCCCCchhhH----------------HHHHHHHHCCcEEEEEcCCCCCCCCchhhccC--CC---CCC-
Q 003886 591 CDPLIVVLHGGPHSVSLSSYS----------------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL--PG---KVG- 648 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~----------------~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~--~~---~~~- 648 (789)
+.|+||++||++++ ...|. .....|+++||.|+++|+|| +|.+..... .+ .+.
T Consensus 49 ~~~~vv~~hG~~~~--~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~~~~~~~~~~~~~~ 123 (354)
T 2rau_A 49 GNDAVLILPGTWSS--GEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRT---HYVPPFLKDRQLSFTANWGW 123 (354)
T ss_dssp CEEEEEEECCTTCC--HHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGG---GGCCTTCCGGGGGGGTTCSH
T ss_pred CCCEEEEECCCCCC--ccccccccccccccccccchhhHHHHHHhCCCEEEEecCCC---CCCCCcccccccccccCCcH
Confidence 56899999998765 33222 56788999999999999998 333321100 00 111
Q ss_pred cccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 003886 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPL 705 (789)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-p~~~~a~v~~~pv 705 (789)
...++|+.++++++.++ .+.++++++|||+||++++.++.++ |++++++|+.++.
T Consensus 124 ~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~ 179 (354)
T 2rau_A 124 STWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGG 179 (354)
T ss_dssp HHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCS
T ss_pred HHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccc
Confidence 12257888888888776 4568999999999999999999998 9999999999654
No 229
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.44 E-value=2.1e-13 Score=148.39 Aligned_cols=141 Identities=21% Similarity=0.211 Sum_probs=100.3
Q ss_pred CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCc--------------hhhccCCCCCCc----
Q 003886 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGE--------------EALQSLPGKVGS---- 649 (789)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~--------------~~~~~~~~~~~~---- 649 (789)
.++++|+||++||+++. ...|...++.|+++||.|+++|+||.++... .+.. .....+.
T Consensus 94 ~~~~~P~Vv~~HG~~~~--~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~ 170 (383)
T 3d59_A 94 PGEKYPLVVFSHGLGAF--RTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLY-LRTLKQEEETH 170 (383)
T ss_dssp CSSCEEEEEEECCTTCC--TTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEE-CCCCCHHHHHH
T ss_pred cCCCCCEEEEcCCCCCC--chHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeee-ccccCcccchh
Confidence 34689999999998764 4567778899999999999999998543210 0000 0000011
Q ss_pred -------ccHHHHHHHHHHHHH--------------------cCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEe
Q 003886 650 -------QDVNDVLTAIDHVID--------------------MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAAR 702 (789)
Q Consensus 650 -------~~~~D~~~~i~~l~~--------------------~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~ 702 (789)
...+|+.++++++.+ +..+|.+||+++|||+||++++.++.+.+ +++++|+.
T Consensus 171 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~ 249 (383)
T 3d59_A 171 IRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIAL 249 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEe
Confidence 114688889999876 45578899999999999999999988755 79999998
Q ss_pred CCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCC
Q 003886 703 NPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRV 773 (789)
Q Consensus 703 ~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v 773 (789)
+|... +... ..+.++++|+|++||++|..+
T Consensus 250 ~~~~~------------------------------p~~~-----------~~~~~i~~P~Lii~g~~D~~~ 279 (383)
T 3d59_A 250 DAWMF------------------------------PLGD-----------EVYSRIPQPLFFINSEYFQYP 279 (383)
T ss_dssp SCCCT------------------------------TCCG-----------GGGGSCCSCEEEEEETTTCCH
T ss_pred CCccC------------------------------CCch-----------hhhccCCCCEEEEecccccch
Confidence 87421 0000 123577899999999999854
No 230
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.43 E-value=4.3e-12 Score=132.10 Aligned_cols=235 Identities=13% Similarity=0.172 Sum_probs=161.4
Q ss_pred eCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCC
Q 003886 161 PSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 239 (789)
Q Consensus 161 ~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 239 (789)
++++|++|+|....+ ..+++.+. ++...++++... .--+++||++|+|+.....+...
T Consensus 21 ~~~~g~~iy~~n~~d--~~~ly~~~~dg~~~~~l~~~~--------------~~~i~~~g~~Iyy~~~~~~~~~~----- 79 (302)
T 3s25_A 21 FCESDGEVFFSNTND--NGRLYAMNIDGSNIHKLSNDT--------------AMYINADKNYVYYVRNNNQKITS----- 79 (302)
T ss_dssp EEEETTEEEEEEGGG--TTEEEEEETTSCSCEEEEEEE--------------EEEEEECSSEEEEEEECC----------
T ss_pred EEEeCCEEEEEeCCC--CceEEEEcCCCCCCEEccCCc--------------eeeEEEcCCEEEEEECCCCcccc-----
Confidence 568999999986542 35799999 455666666531 23468999999999875421100
Q ss_pred CCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeec
Q 003886 240 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 319 (789)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~ 319 (789)
..+....+..|+++++++++.+.|. ... ...|+|+|++ |+|+...
T Consensus 80 -------------------------~~~~~~n~~~Iy~i~~dg~~~~~l~--~~~----~~~~s~~g~~----Iy~~~~~ 124 (302)
T 3s25_A 80 -------------------------QTFFSYDRNSLCRIKRNGHGSTVLD--PDP----CIYASLIGNY----IYYLHYD 124 (302)
T ss_dssp --------------------------CCSSCCSEEEEEEETTSCCCEEEE--CSC----EEEEEEETTE----EEEEEES
T ss_pred -------------------------cceeccCCCeEEEEeCCCCcceEee--cCC----ccEEEEeCCE----EEEEeec
Confidence 0000113468999999999888773 221 2379999999 9998621
Q ss_pred CCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCC
Q 003886 320 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 399 (789)
Q Consensus 320 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~ 399 (789)
.. ....||++++ ++...++|+.+.. +.|+|+|+.|+|++..
T Consensus 125 ~~-----------~~~~Iy~~~~-----------------dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g------- 165 (302)
T 3s25_A 125 TQ-----------TATSLYRIRI-----------------DGEEKKKIKNHYL----FTCNTSDRYFYYNNPK------- 165 (302)
T ss_dssp SS-----------SCEEEEEEET-----------------TSCCCEEEESSCC----CCSEEETTEEEEECTT-------
T ss_pred CC-----------CCceEEEEEC-----------------CCCCeEEEeCCCc----eEeeEECCEEEEEeCC-------
Confidence 11 2237999998 6777888887643 5689999999999752
Q ss_pred ccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc
Q 003886 400 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 479 (789)
Q Consensus 400 ~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~ 479 (789)
..+|++++++++..+.+..+. . ..++.|+++.||++....+ ..|++++++++.
T Consensus 166 ---~~~Iy~~~l~g~~~~~l~~~~----------------------~-~~~~~P~g~~iy~t~~~~~-~~I~~~~ldG~~ 218 (302)
T 3s25_A 166 ---NGQLYRYDTASQSEALFYDCN----------------------C-YKPVVLDDTNVYYMDVNRD-NAIVHVNINNPN 218 (302)
T ss_dssp ---TCCEEEEETTTTEEEEEECSC----------------------E-EEEEEEETTEEEEEEGGGT-TEEEEECSSSCC
T ss_pred ---CceEEEEECCCCCEEEEeCCC----------------------c-cceeeecCCEEEEEEcCCC-cEEEEEECCCCC
Confidence 247999999876543332111 0 1135599999998754433 789999999999
Q ss_pred EEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 480 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 480 ~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
.+.|+.... ..++++++.|++...... ..|+..++.+.
T Consensus 219 ~~~Lt~~~~----~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~ 256 (302)
T 3s25_A 219 PVVLTEANI----EHYNVYGSLIFYQRGGDN--PALCVVKNDGT 256 (302)
T ss_dssp CEECSCSCE----EEEEEETTEEEEEECSSS--CEEEEEETTSC
T ss_pred eEEEeCCCc----ceEEECCCEEEEEECCCC--cEEEEEECCCC
Confidence 888875432 458999999987654432 68999988754
No 231
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.43 E-value=6.6e-12 Score=134.11 Aligned_cols=268 Identities=12% Similarity=0.074 Sum_probs=163.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
+.+....|||||++|+..+..+ ...+|+ .++....+... .+. ...+.|||||+.|+..+.+...
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~~~~~---~~~------v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDG-----KLIIWDSYTTNKVHAIPLR---SSW------VMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTT-----EEEEEETTTCCEEEEEECS---SSC------EEEEEECTTSSEEEEEETTCEE
T ss_pred CceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCcceEeecC---Ccc------EEEEEECCCCCEEEEEeCCCeE
Confidence 4588899999999999877654 567773 33333333321 112 2689999999999987765432
Q ss_pred CCCCccCCCCCCC----CCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003886 232 SKPTFSLGSTKGG----SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (789)
Q Consensus 232 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (789)
. .|+....... .....+........|.++ +..+++..+..|.+||+.+++..... ......+..++|+||++
T Consensus 122 ~--iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 122 S--IYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp E--EEETTTCSBSCEEEEEEECCSSCEEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSS
T ss_pred E--EEECccCCCcceeEEEecCCCccEEEEEECCC-CcEEEEECCCcEEEEECCCCcEEEEE-cCCCCceEEEEECCCCC
Confidence 2 2322111100 011122233333445554 34556667789999999988765441 22344678899999998
Q ss_pred CCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecCCCCEE
Q 003886 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFL 386 (789)
Q Consensus 308 ~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~~l 386 (789)
. |+..+ .+..|.++|+ .++ ....+..+...+...+|+|||+.|
T Consensus 198 ~----l~sg~---------------~d~~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 198 L----FVSGA---------------CDASAKLWDV-----------------REGMCRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------TTCSEEEEECCCSSCEEEEEECTTSSEE
T ss_pred E----EEEEe---------------CCCcEEEEEC-----------------CCCeeEEEEcCCcCCEEEEEEcCCCCEE
Confidence 6 65554 2336888887 333 345666677778899999999998
Q ss_pred EEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCC
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (789)
+..+.+. .|.+||+.++..... ... ... ...+..+.|+|||+.| +++..++
T Consensus 242 ~s~s~d~-----------~v~iwd~~~~~~~~~----------~~~--~~~-----~~~v~~~~~s~~g~~l-~~g~~d~ 292 (340)
T 1got_B 242 ATGSDDA-----------TCRLFDLRADQELMT----------YSH--DNI-----ICGITSVSFSKSGRLL-LAGYDDF 292 (340)
T ss_dssp EEEETTS-----------CEEEEETTTTEEEEE----------ECC--TTC-----CSCEEEEEECTTSSEE-EEEETTS
T ss_pred EEEcCCC-----------cEEEEECCCCcEEEE----------Ecc--CCc-----ccceEEEEECCCCCEE-EEECCCC
Confidence 8777543 589999876433110 000 000 0123467899999855 5555555
Q ss_pred eEEEEEEECCCCcEEEecCC-CCCceeEEeeecCCEEEEEE
Q 003886 467 SQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 467 ~~~l~~~dl~tg~~~~lt~~-~~~~~~~~~s~dg~~l~~~~ 506 (789)
. |..+|+.+++....... ...+....++++|..|+...
T Consensus 293 ~--i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 293 N--CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp E--EEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred e--EEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 5 44557767765544333 33455567888887665443
No 232
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.43 E-value=1.2e-12 Score=126.06 Aligned_cols=134 Identities=18% Similarity=0.182 Sum_probs=98.9
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCc---EEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCC
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy---~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (789)
.|+||++||.+.+ ...|......|+++|| .|+++|++| +|.+.. ...+++.+.++.++++ .
T Consensus 3 ~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~~~~v~~~d~~g---~g~s~~---------~~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGGA--SFNFAGIKSYLVSQGWSRDKLYAVDFWD---KTGTNY---------NNGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEECCCSC---TTCCHH---------HHHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCCC--HhHHHHHHHHHHHcCCCCccEEEEecCC---CCCchh---------hhHHHHHHHHHHHHHH--c
Confidence 5789999997764 5677778889999998 699999998 333221 2356666666666665 3
Q ss_pred CCccEEEEEcCccHHHHHHHHHhC--CCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHH
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRF 746 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~~~--p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (789)
+.+++.++|||+||.+++.++.++ |++++++|+.+|....... ..+ +.
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~--------------------~~~---~~------- 116 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG--------------------KAL---PG------- 116 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS--------------------BCC---CC-------
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc--------------------ccC---CC-------
Confidence 567899999999999999999987 8899999999987542110 000 00
Q ss_pred HhcCccccCCCCCCCEEEEEeCCCCCCChHHH
Q 003886 747 HSKSPISHISKVKTPTIFLLGAQDLRVPVSNG 778 (789)
Q Consensus 747 ~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~ 778 (789)
.....++|+|++||++|..||++.+
T Consensus 117 -------~~~~~~~p~l~i~G~~D~~v~~~~~ 141 (181)
T 1isp_A 117 -------TDPNQKILYTSIYSSADMIVMNYLS 141 (181)
T ss_dssp -------SCTTCCCEEEEEEETTCSSSCHHHH
T ss_pred -------CCCccCCcEEEEecCCCcccccccc
Confidence 0012357999999999999999854
No 233
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.43 E-value=1.5e-12 Score=138.20 Aligned_cols=120 Identities=21% Similarity=0.307 Sum_probs=84.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....- +.|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+..... .......
T Consensus 19 ~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~~-~~~~~~~ 84 (328)
T 2cjp_A 19 NGLNMHLAELG--------EGPTILFIHGFPEL--WYSWRHQMVYLAERGYRAVAPDLRG---YGDTTGAPL-NDPSKFS 84 (328)
T ss_dssp TTEEEEEEEEC--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTT---STTCBCCCT-TCGGGGS
T ss_pred CCcEEEEEEcC--------CCCEEEEECCCCCc--hHHHHHHHHHHHHCCcEEEEECCCC---CCCCCCcCc-CCccccc
Confidence 57666654331 24789999998764 5678778888999999999999998 565542200 1112233
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
++++.+.+..+++.-..+.+++.|+|||+||.+++.+|.++|++++++|+.++.
T Consensus 85 ~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 85 ILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 455444444444431112578999999999999999999999999999998753
No 234
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.43 E-value=9.3e-12 Score=133.98 Aligned_cols=131 Identities=13% Similarity=0.044 Sum_probs=80.4
Q ss_pred CCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec-----
Q 003886 293 KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL----- 367 (789)
Q Consensus 293 ~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L----- 367 (789)
.......++|||||+. |+++. .. ...|+++++ .++..+.+
T Consensus 209 ~~~~~~~~~~spdg~~----l~v~~-~~-------------~~~v~v~~~-----------------~~g~~~~~~~~~~ 253 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKF----AYLIN-EI-------------GGTVIAFRY-----------------ADGMLDEIQTVAA 253 (361)
T ss_dssp TTCCEEEEEECTTSSE----EEEEE-TT-------------TCEEEEEEE-----------------ETTEEEEEEEEES
T ss_pred CCCCCeEEEEcCCCCE----EEEEc-CC-------------CCeEEEEEe-----------------cCCceEEeEEEec
Confidence 3445668999999996 65554 21 235777776 33333222
Q ss_pred -CCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecC--CCCCCCcccceeeEEeeeeccCCCCCcccccc
Q 003886 368 -TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 444 (789)
Q Consensus 368 -t~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~--~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~ 444 (789)
..+......++|||||++|+...... ...|.+|+++ ++....+ ..... . .
T Consensus 254 ~~~~~~~~~~i~~spdg~~l~v~~~~~---------~~~i~v~~~~~~~g~~~~~--------~~~~~---g-------~ 306 (361)
T 3scy_A 254 DTVNAQGSGDIHLSPDGKYLYASNRLK---------ADGVAIFKVDETNGTLTKV--------GYQLT---G-------I 306 (361)
T ss_dssp CSSCCCCEEEEEECTTSSEEEEEECSS---------SCEEEEEEECTTTCCEEEE--------EEEEC---S-------S
T ss_pred CCCCCCCcccEEECCCCCEEEEECCCC---------CCEEEEEEEcCCCCcEEEe--------eEecC---C-------C
Confidence 11122345789999999886554330 2357777764 3332111 11100 0 1
Q ss_pred CCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecC
Q 003886 445 SILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 485 (789)
Q Consensus 445 ~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~ 485 (789)
.+..+.|+|||++|++.....+...+|.+|..+|+++.+..
T Consensus 307 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 347 (361)
T 3scy_A 307 HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKK 347 (361)
T ss_dssp CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSC
T ss_pred CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecce
Confidence 23467899999988877666788899999999999887753
No 235
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.42 E-value=3.9e-13 Score=139.53 Aligned_cols=202 Identities=13% Similarity=0.062 Sum_probs=118.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHH---HHHHHHCCcEEEEEcCCCCCCCCchhhccCC-CCC
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-GKV 647 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~---~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~-~~~ 647 (789)
.+..+..+ .|+.+ .|+||++||.+.......|... .+.+++.||.|+++|.+|+.++......... +..
T Consensus 16 ~~~~~~v~--~~p~~-----~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~ 88 (280)
T 1dqz_A 16 MGRDIKVQ--FQGGG-----PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQN 88 (280)
T ss_dssp TTEEEEEE--EECCS-----SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCC
T ss_pred cCceeEEE--EcCCC-----CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCcccccc
Confidence 34556554 34422 2589999998542233455432 3467788999999998865444321100000 000
Q ss_pred CcccHHHH--HHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcch--hh
Q 003886 648 GSQDVNDV--LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC--YV 723 (789)
Q Consensus 648 ~~~~~~D~--~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~--~~ 723 (789)
....+.+. .+.+.++.++-.++.++++|+||||||++++.++.++|++|+++|+.+|..++.... ...+. +.
T Consensus 89 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~----~~~~~~~~~ 164 (280)
T 1dqz_A 89 YTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESW----WPTLIGLAM 164 (280)
T ss_dssp SCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTT----HHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcc----hhhhHHHHh
Confidence 12233332 234444444323677899999999999999999999999999999999987643210 00000 00
Q ss_pred hhccCccccccCCCCChhhHHHHHhcCccccCCCC---CCCEEEEEeCCCC--------------CCChHHHHHHHHHCC
Q 003886 724 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQVIYHIP 786 (789)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~Lii~G~~D~--------------~vp~~~~~~l~~~l~ 786 (789)
...+......+.+.+. ...+.+.+|..++.++ .+|++|.||++|. .++..++.+++++|+
T Consensus 165 ~~~~~~~~~~~~g~~~---~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~ 241 (280)
T 1dqz_A 165 NDSGGYNANSMWGPSS---DPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYA 241 (280)
T ss_dssp HHTTSCCHHHHHCSTT---SHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCcCHHHhcCCCC---chhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHHHHHHHH
Confidence 0000000000011111 1345566777655554 5799999999997 578899999999886
Q ss_pred C
Q 003886 787 F 787 (789)
Q Consensus 787 ~ 787 (789)
.
T Consensus 242 ~ 242 (280)
T 1dqz_A 242 A 242 (280)
T ss_dssp H
T ss_pred h
Confidence 3
No 236
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.42 E-value=1.5e-12 Score=132.95 Aligned_cols=116 Identities=14% Similarity=0.204 Sum_probs=86.1
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++....-+ ...|+||++||.+.+ ...|......|++ +|.|+++|+|| +|.+... .....
T Consensus 7 ~g~~l~~~~~g~------~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G---~G~S~~~-----~~~~~ 69 (264)
T 3ibt_A 7 NGTLMTYSESGD------PHAPTLFLLSGWCQD--HRLFKNLAPLLAR-DFHVICPDWRG---HDAKQTD-----SGDFD 69 (264)
T ss_dssp TTEECCEEEESC------SSSCEEEEECCTTCC--GGGGTTHHHHHTT-TSEEEEECCTT---CSTTCCC-----CSCCC
T ss_pred CCeEEEEEEeCC------CCCCeEEEEcCCCCc--HhHHHHHHHHHHh-cCcEEEEcccc---CCCCCCC-----ccccC
Confidence 566666444432 245899999997765 4567777777754 59999999998 5554422 22335
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-CCceeEEEEeCCcc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLC 706 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-p~~~~a~v~~~pv~ 706 (789)
++++.+.+..+++. ++.+++.|+|||+||.+++.++.++ |++++++|+.+|..
T Consensus 70 ~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 70 SQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 66666666666665 4557899999999999999999999 99999999998765
No 237
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.41 E-value=1.9e-11 Score=128.47 Aligned_cols=269 Identities=14% Similarity=0.177 Sum_probs=160.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||||++|+.....+ .+.+|+ +++..+.+.. ..+.| ..+.|+|||+.|+..+.+...
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~---h~~~v------~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADK-----LIKIWGAYDGKFEKTISG---HKLGI------SDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECC---CSSCE------EEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEEECCCCCEEEEeeCCC-----eEEEEeCCCcccchhhcc---CCCce------EEEEEcCCCCEEEEECCCCEE
Confidence 3578899999999999876554 456673 4444443321 12222 789999999999988766533
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (789)
. .|+............+........|.++....+++..+..|.+||+.+++..... ......+..+.|+|||+.
T Consensus 90 ~--vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~--- 163 (312)
T 4ery_A 90 K--IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSL--- 163 (312)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE---
T ss_pred E--EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcEEEEEEcCCCCE---
Confidence 2 3333222222222233344445567777655566667789999999988754431 233446788999999997
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecC-CCCCccCcceecCCCCEEEEE
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLT-ESISSAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt-~~~~~~~~p~~SpDG~~la~~ 389 (789)
|+..+ ....|.++|+ .+++ ...+. .........+|+|||++|+..
T Consensus 164 -l~~~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 164 -IVSSS---------------YDGLCRIWDT-----------------ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCSSCCCEEEEEECTTSSEEEEE
T ss_pred -EEEEe---------------CCCcEEEEEC-----------------CCCceeeEEeccCCCceEEEEECCCCCEEEEE
Confidence 66555 2236888887 3333 33333 233456778999999998877
Q ss_pred ecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccc-cCCCEEEEEEEeCCeE
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGSSQ 468 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws-~Dg~~l~~~~~~~~~~ 468 (789)
+.+. .|.+||+.++.......+. .... ......|+ ++++ +++++..++.
T Consensus 211 ~~d~-----------~i~iwd~~~~~~~~~~~~~----------~~~~-------~~~~~~~~~~~~~-~l~sg~~dg~- 260 (312)
T 4ery_A 211 TLDN-----------TLKLWDYSKGKCLKTYTGH----------KNEK-------YCIFANFSVTGGK-WIVSGSEDNL- 260 (312)
T ss_dssp ETTT-----------EEEEEETTTTEEEEEECSS----------CCSS-------SCCCEEEECSSSC-EEEECCTTSC-
T ss_pred cCCC-----------eEEEEECCCCcEEEEEEec----------CCce-------EEEEEEEEeCCCc-EEEEECCCCE-
Confidence 6442 5999998765432110000 0000 01122344 4555 5555555554
Q ss_pred EEEEEECCCCcEEEecCCC-CCceeEEeeecCCEEEEEE
Q 003886 469 VIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 469 ~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~ 506 (789)
|..+|+.+++.......+ ..+....++++++.++...
T Consensus 261 -i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 261 -VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp -EEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred -EEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEE
Confidence 455578788766554443 3344457788887665544
No 238
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.41 E-value=1.1e-13 Score=144.00 Aligned_cols=105 Identities=15% Similarity=0.234 Sum_probs=79.7
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCc
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (789)
.|+||++||.+.......|......|+ +||.|+++|+|| +|.+... ......++++.+.+..+++. +..+
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G---~G~S~~~----~~~~~~~~~~~~~l~~~l~~--~~~~ 110 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPN---SGYSPVS----NQANVGLRDWVNAILMIFEH--FKFQ 110 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTT---STTSCCC----CCTTCCHHHHHHHHHHHHHH--SCCS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCC---CCCCCCC----CcccccHHHHHHHHHHHHHH--hCCC
Confidence 389999997434333456666666676 699999999998 5554311 12234577777777777776 3456
Q ss_pred cEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 672 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 672 rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++.|+|||+||.+++.++.++|++++++|+.+|..
T Consensus 111 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 145 (292)
T 3l80_A 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTT 145 (292)
T ss_dssp EEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCC
T ss_pred CeEEEEEchhHHHHHHHHHhCchheeeEEEECCCC
Confidence 99999999999999999999999999999999654
No 239
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.40 E-value=1.4e-12 Score=133.15 Aligned_cols=94 Identities=23% Similarity=0.330 Sum_probs=71.4
Q ss_pred EEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccE
Q 003886 594 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKV 673 (789)
Q Consensus 594 ~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv 673 (789)
.||++||.+.+ ...|......|+ .+|.|+++|+|| +|.+... ...+++++. +.+.+. ++ +++
T Consensus 15 ~vvllHG~~~~--~~~w~~~~~~L~-~~~~vi~~Dl~G---~G~S~~~------~~~~~~~~~---~~l~~~--l~-~~~ 76 (258)
T 1m33_A 15 HLVLLHGWGLN--AEVWRCIDEELS-SHFTLHLVDLPG---FGRSRGF------GALSLADMA---EAVLQQ--AP-DKA 76 (258)
T ss_dssp EEEEECCTTCC--GGGGGGTHHHHH-TTSEEEEECCTT---STTCCSC------CCCCHHHHH---HHHHTT--SC-SSE
T ss_pred eEEEECCCCCC--hHHHHHHHHHhh-cCcEEEEeeCCC---CCCCCCC------CCcCHHHHH---HHHHHH--hC-CCe
Confidence 79999997654 556776777776 589999999998 5655422 123454443 444443 45 789
Q ss_pred EEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 674 TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 674 ~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
.|+|||+||.+++.+|.++|++++++|+.++.
T Consensus 77 ~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 108 (258)
T 1m33_A 77 IWLGWSLGGLVASQIALTHPERVRALVTVASS 108 (258)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred EEEEECHHHHHHHHHHHHhhHhhceEEEECCC
Confidence 99999999999999999999999999998764
No 240
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.40 E-value=2.3e-12 Score=133.72 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=83.6
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchh-hHH-----HHHHHHHCCcEEEEEcCCCCCCCCchhhccCC
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSK-----SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 644 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~~-----~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~ 644 (789)
.+|..++....-+. ....|+||++||.+.+ ... |.. ....|++ +|.|+++|+|| +|.+.... +
T Consensus 18 ~~~~~l~y~~~G~~----~~~~p~vvllHG~~~~--~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G---~G~s~~~~-~ 86 (286)
T 2qmq_A 18 TPYGSVTFTVYGTP----KPKRPAIFTYHDVGLN--YKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPG---MEEGAPVF-P 86 (286)
T ss_dssp ETTEEEEEEEESCC----CTTCCEEEEECCTTCC--HHHHHHHHHTSHHHHHHHT-TSCEEEEECTT---TSTTCCCC-C
T ss_pred cCCeEEEEEeccCC----CCCCCeEEEeCCCCCC--chhhhhhhhhhchhHHHhc-CCCEEEecCCC---CCCCCCCC-C
Confidence 36777766555332 2256899999997765 222 332 4556655 69999999998 44332111 1
Q ss_pred CCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
.......++++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|..
T Consensus 87 ~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 87 LGYQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp TTCCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 111112466666666555554 345689999999999999999999999999999999865
No 241
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.40 E-value=6.1e-11 Score=127.92 Aligned_cols=268 Identities=12% Similarity=0.080 Sum_probs=135.4
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCE-EEEEeecCCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL-IAYVAEEPSPSK 233 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~-la~~~~~~~~~~ 233 (789)
.....+|||||++|+..... .-.+|.+..+++..++..... +|.. ..+.|||||++ ++|++.....
T Consensus 41 ~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~g~~~~~~~~~~--~g~~------~~~~~spdg~~l~~~~~~~~~~-- 107 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK---KWSSFAVKSPTEIVHEASHPI--GGHP------RANDADTNTRAIFLLAAKQPPY-- 107 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT---EEEEEEEEETTEEEEEEEEEC--CSSG------GGGCTTSCCEEEEEEECSSTTC--
T ss_pred CCcEEEECCCCCEEEEEccc---eEEEEEECCCCCEEEeeEeec--CCCC------ccEEECCCCCEEEEEEecCCcc--
Confidence 35678999999988765543 222233322565554433221 1111 56899999997 4555431100
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEcc-CCceEe-ccCC--CCCCccceEEEeeCCCCC
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQA-VKGI--PKSLSVGQVVWAPLNEGL 309 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~~~~-l~~~--~~~~~~~~~~wSPDg~~~ 309 (789)
..+.. +.+. ....+.+|+++ .|+... +... .....+..++|||||+.
T Consensus 108 -----------------------~~~~~---~~~~--~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~- 158 (365)
T 1jof_A 108 -----------------------AVYAN---PFYK--FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY- 158 (365)
T ss_dssp -----------------------CEEEE---EESS--SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE-
T ss_pred -----------------------eeccc---eeec--CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE-
Confidence 00000 0000 12456777775 355432 2101 12335678999999996
Q ss_pred ccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCC-CCCeeec---C--CCCCccCcceecCCC
Q 003886 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-DLPVVNL---T--ESISSAFFPRFSPDG 383 (789)
Q Consensus 310 ~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~L---t--~~~~~~~~p~~SpDG 383 (789)
|+ +++.. ...|+++++ + +++.+.+ . .+.......+|||||
T Consensus 159 ---l~-~~~~~-------------~~~v~~~~~-----------------~~~g~~~~~~~~~~~~~g~~p~~~~~spdg 204 (365)
T 1jof_A 159 ---LY-SADLT-------------ANKLWTHRK-----------------LASGEVELVGSVDAPDPGDHPRWVAMHPTG 204 (365)
T ss_dssp ---EE-EEETT-------------TTEEEEEEE-----------------CTTSCEEEEEEEECSSTTCCEEEEEECTTS
T ss_pred ---EE-EEcCC-------------CCEEEEEEE-----------------CCCCCEEEeeeEecCCCCCCCCEeEECCCC
Confidence 64 44322 126888887 3 4444322 1 112345677999999
Q ss_pred CEEEEEecCCCCCCCCccccceeEEeecC--CCCCCCcccceeeEEeeeeccCCCCCcccc-----ccCCCCCc-cccCC
Q 003886 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLY-----SSSILSNP-WLSDG 455 (789)
Q Consensus 384 ~~la~~s~~~~~~~g~~~~~~~L~~~d~~--~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~-----~~~~~~~~-ws~Dg 455 (789)
++|+...... ..+.+++++ ++..... . ..+... +. .+.|.- ......+. |+|||
T Consensus 205 ~~l~v~~~~~----------~~v~v~~~~~~~g~~~~~---~-~~~~~~--~~--~~~g~~~~~~~~~~~~~i~~~spdG 266 (365)
T 1jof_A 205 NYLYALMEAG----------NRICEYVIDPATHMPVYT---H-HSFPLI--PP--GIPDRDPETGKGLYRADVCALTFSG 266 (365)
T ss_dssp SEEEEEETTT----------TEEEEEEECTTTCCEEEE---E-EEEESS--CT--TCCCBCTTTSSBSEEEEEEEECTTS
T ss_pred CEEEEEECCC----------CeEEEEEEeCCCCcEEEc---c-ceEEcC--CC--CcCCcccccccccccccEEEECCCC
Confidence 9987665432 245555543 3332100 0 001111 00 000000 00123568 99999
Q ss_pred CEEEEEEEeCC-----eEEEEEEECCCCcEEEe---cC-CCCCceeEEeee---cCCEEEEEEeCCCCCCeEEEEee
Q 003886 456 CTMLLSSIWGS-----SQVIISVNVSSGELLRI---TP-AESNFSWSLLTL---DGDNIIAVSSSPVDVPQVKYGYF 520 (789)
Q Consensus 456 ~~l~~~~~~~~-----~~~l~~~dl~tg~~~~l---t~-~~~~~~~~~~s~---dg~~l~~~~ss~~~p~~i~~~~~ 520 (789)
++||++..... ...+|.++. +|+++++ .. .........++| ||++|++...... .+.+++.
T Consensus 267 ~~l~v~~~~~~~~~~~~i~v~~~~~-~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~---~v~v~~~ 339 (365)
T 1jof_A 267 KYMFASSRANKFELQGYIAGFKLRD-CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEG---WLEIYRW 339 (365)
T ss_dssp SEEEEEEEESSTTSCCEEEEEEECT-TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSC---EEEEEEE
T ss_pred CEEEEECCCCCCCCCCeEEEEEECC-CCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCC---eEEEEEE
Confidence 98876554443 455665543 6777652 11 122233457899 7888766544322 3555544
No 242
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.40 E-value=2.3e-12 Score=125.20 Aligned_cols=136 Identities=13% Similarity=0.140 Sum_probs=98.1
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
+.|.||++||.+.+.. ..|......+...+ +.++++| ++ ..++++..+.+..+++. .+
T Consensus 16 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~~---~~v~~~~---~~------------~~~~~~~~~~~~~~~~~--~~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD-EHWQSHWERRFPHW---QRIRQRE---WY------------QADLDRWVLAIRRELSV--CT- 73 (191)
T ss_dssp TTCEEEEECCTTCCCT-TSHHHHHHHHCTTS---EECCCSC---CS------------SCCHHHHHHHHHHHHHT--CS-
T ss_pred CCceEEEECCCCCCch-hhHHHHHHHhcCCe---EEEeccC---CC------------CcCHHHHHHHHHHHHHh--cC-
Confidence 4588999999876531 34444433332333 4556665 21 23466667777666665 34
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcC
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKS 750 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 750 (789)
+++.|+|||+||.+++.++.++|++++++|+.+|....... + +.
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--------------~-----------~~----------- 117 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE--------------I-----------DD----------- 117 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT--------------C-----------TT-----------
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc--------------C-----------cc-----------
Confidence 79999999999999999999999999999999997653210 0 00
Q ss_pred ccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHC
Q 003886 751 PISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHI 785 (789)
Q Consensus 751 p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l 785 (789)
...+.++++|+|+++|++|..+|++.+.++++.+
T Consensus 118 -~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~ 151 (191)
T 3bdv_A 118 -RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW 151 (191)
T ss_dssp -TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH
T ss_pred -ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc
Confidence 0346788999999999999999999999998865
No 243
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.40 E-value=1.3e-12 Score=138.29 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=83.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++.... ..++.|.||++||.+.+ ...|......|++. |.|+++|+|| +|.+... ..+...
T Consensus 29 ~g~~l~y~~~------G~g~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---hG~S~~~----~~~~~~ 92 (318)
T 2psd_A 29 LDSFINYYDS------EKHAENAVIFLHGNATS--SYLWRHVVPHIEPV-ARCIIPDLIG---MGKSGKS----GNGSYR 92 (318)
T ss_dssp TTEEEEEEEC------CSCTTSEEEEECCTTCC--GGGGTTTGGGTTTT-SEEEEECCTT---STTCCCC----TTSCCS
T ss_pred CCeEEEEEEc------CCCCCCeEEEECCCCCc--HHHHHHHHHHhhhc-CeEEEEeCCC---CCCCCCC----CCCccC
Confidence 5666654332 12234689999997764 45666666667654 7999999998 6655321 112245
Q ss_pred HHHHHHHHHHHHHcCCCCC-ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCC
Q 003886 652 VNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 704 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~-~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~p 704 (789)
++++.+.+..+++. ++. +++.|+||||||.+++.+|.++|++++++|+.++
T Consensus 93 ~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~ 144 (318)
T 2psd_A 93 LLDHYKYLTAWFEL--LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMES 144 (318)
T ss_dssp HHHHHHHHHHHHTT--SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred HHHHHHHHHHHHHh--cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEecc
Confidence 77777777777776 445 7899999999999999999999999999999764
No 244
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.39 E-value=6.6e-13 Score=139.14 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=81.5
Q ss_pred CCCCcEEEEEcCCCCCCCchhhHHHHHHHHHC--CcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcC
Q 003886 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 666 (789)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~--Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 666 (789)
....|.||++||.+.+ ...|......|+++ ||.|+++|+|| +|.+... ....++++.+.+..+++..
T Consensus 33 ~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~g~~vi~~D~~G---~G~s~~~------~~~~~~~~~~~l~~~~~~~ 101 (302)
T 1pja_A 33 RASYKPVIVVHGLFDS--SYSFRHLLEYINETHPGTVVTVLDLFD---GRESLRP------LWEQVQGFREAVVPIMAKA 101 (302)
T ss_dssp --CCCCEEEECCTTCC--GGGGHHHHHHHHHHSTTCCEEECCSSC---SGGGGSC------HHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCeEEEECCCCCC--hhHHHHHHHHHHhcCCCcEEEEeccCC---Cccchhh------HHHHHHHHHHHHHHHhhcC
Confidence 3456789999997664 55788888899988 99999999998 4554321 1234677777777777663
Q ss_pred CCCCccEEEEEcCccHHHHHHHHHhCCC-ceeEEEEeCCcc
Q 003886 667 LANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLC 706 (789)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~~~~~p~-~~~a~v~~~pv~ 706 (789)
.+++.|+|||+||.+++.++.++|+ +++++|+.++..
T Consensus 102 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 139 (302)
T 1pja_A 102 ---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 139 (302)
T ss_dssp ---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred ---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCc
Confidence 4789999999999999999999999 799999998754
No 245
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.39 E-value=4.4e-11 Score=128.22 Aligned_cols=245 Identities=13% Similarity=0.152 Sum_probs=150.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||||++|+.....+ .+.+| ..++....+.. ..+.| ..+.|+|||+.|+..+.+
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~---h~~~v------~~~~~~~~~~~l~s~~~d--- 95 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDS-----SASVWYSLNGERLGTLDG---HTGTI------WSIDVDCFTKYCVTGSAD--- 95 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSS-----CEEEEETTTCCEEEEECC---CSSCE------EEEEECTTSSEEEEEETT---
T ss_pred ceEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCchhhhhhhh---cCCcE------EEEEEcCCCCEEEEEeCC---
Confidence 4588999999999999876543 35566 34444443321 22222 789999999999876432
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (789)
..|.+||+.+++.... ......+..+.|+|||+.
T Consensus 96 -----------------------------------------g~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~--- 129 (369)
T 3zwl_B 96 -----------------------------------------YSIKLWDVSNGQCVAT--WKSPVPVKRVEFSPCGNY--- 129 (369)
T ss_dssp -----------------------------------------TEEEEEETTTCCEEEE--EECSSCEEEEEECTTSSE---
T ss_pred -----------------------------------------CeEEEEECCCCcEEEE--eecCCCeEEEEEccCCCE---
Confidence 5799999998887655 335556789999999997
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCC--ccCcceecCCCCEEEEE
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~--~~~~p~~SpDG~~la~~ 389 (789)
|+..+.... .....|+++|+......... ..........+....+ .+...+|+|||+.|+..
T Consensus 130 -l~~~~~~~~----------~~~g~i~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 130 -FLAILDNVM----------KNPGSINIYEIERDSATHEL-----TKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp -EEEEECCBT----------TBCCEEEEEEEEECTTTCCE-----EEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred -EEEecCCcc----------CCCCEEEEEEecCCccceee-----cccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 777653210 01235666666211000000 0001112223333333 67888999999998876
Q ss_pred ecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEE
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (789)
+.+ ..|++||+.++... ...... ....+..+.|+||++.|+. +..++ .
T Consensus 194 ~~d-----------g~i~i~d~~~~~~~---------~~~~~~---------~~~~v~~~~~~~~~~~l~~-~~~d~--~ 241 (369)
T 3zwl_B 194 HKD-----------GKISKYDVSNNYEY---------VDSIDL---------HEKSISDMQFSPDLTYFIT-SSRDT--N 241 (369)
T ss_dssp ETT-----------SEEEEEETTTTTEE---------EEEEEC---------CSSCEEEEEECTTSSEEEE-EETTS--E
T ss_pred cCC-----------CEEEEEECCCCcEe---------EEEEec---------CCCceeEEEECCCCCEEEE-ecCCc--e
Confidence 644 25999998763221 000000 0013446789999996654 44444 4
Q ss_pred EEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCC
Q 003886 470 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 509 (789)
Q Consensus 470 l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~ 509 (789)
|..+|+.+++...............++++++.+++...+.
T Consensus 242 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 242 SFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC
T ss_pred EEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCC
Confidence 6667888888776655555556678899999887776544
No 246
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.39 E-value=3.4e-11 Score=128.62 Aligned_cols=291 Identities=9% Similarity=-0.009 Sum_probs=166.7
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCcccee--ecCCcceecccEEEEeCCC---CCeEEEEecCCCC
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQ--WAPFPVEMTGASAVVPSPS---GSKLLVVRNPENE 177 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt--~~~~~~~~~~~~~~~~SPd---G~~la~~~~~~~~ 177 (789)
.++|||..++...+.. +..+.+.++++.+. +...+. ... ..+...+|+|+ |+.|+.....+
T Consensus 25 ~~~p~~~~l~~~~s~~-----~~d~~v~iw~~~~~--~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~l~~~~~dg-- 90 (357)
T 3i2n_A 25 KWVPCSAKFVTMGNFA-----RGTGVIQLYEIQHG--DLKLLREIEKA-----KPIKCGTFGATSLQQRYLATGDFGG-- 90 (357)
T ss_dssp EECTTSSEEEEEEC-------CCCEEEEEEEECSS--SEEEEEEEEES-----SCEEEEECTTCCTTTCCEEEEETTS--
T ss_pred EEcCCCceEEEecCcc-----CCCcEEEEEeCCCC--cccceeeeccc-----CcEEEEEEcCCCCCCceEEEecCCC--
Confidence 4579998776553220 12456777776433 222221 122 45889999999 68888776543
Q ss_pred CCeEEEEec--CCc-eeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCC
Q 003886 178 SPIQFELWS--QSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 254 (789)
Q Consensus 178 ~~~~~~i~~--~~~-~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (789)
.+.+|+ .++ ....+.. ..+.|..-.+...++||||++.|+..+.+
T Consensus 91 ---~i~iwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~s~~~~~l~~~~~d-------------------------- 138 (357)
T 3i2n_A 91 ---NLHIWNLEAPEMPVYSVKG---HKEIINAIDGIGGLGIGEGAPEIVTGSRD-------------------------- 138 (357)
T ss_dssp ---CEEEECTTSCSSCSEEECC---CSSCEEEEEEESGGGCC-CCCEEEEEETT--------------------------
T ss_pred ---eEEEEeCCCCCccEEEEEe---cccceEEEeeccccccCCCccEEEEEeCC--------------------------
Confidence 355662 333 3333321 11222111111233689999998876443
Q ss_pred CcceeeCCcccccCCccCceEEEEEccCCc--eEeccCCCC--CCccceEE----EeeCCCCCccEEEEEeecCCceeee
Q 003886 255 GQGDWEEDWGETYAGKRQPSLFVININSGE--VQAVKGIPK--SLSVGQVV----WAPLNEGLHQYLVFVGWSSETRKLG 326 (789)
Q Consensus 255 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~--~~~l~~~~~--~~~~~~~~----wSPDg~~~~~~l~f~~~~~~~~~~g 326 (789)
..|.+||+.+++ ...+..... ...+..+. |+||++. |+..+
T Consensus 139 ------------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----l~~~~--------- 187 (357)
T 3i2n_A 139 ------------------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERV----VCAGY--------- 187 (357)
T ss_dssp ------------------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCE----EEEEE---------
T ss_pred ------------------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCE----EEEEc---------
Confidence 468888888765 333421111 12444555 7899987 66655
Q ss_pred eeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecC---CCCEEEEEecCCCCCCCCcccc
Q 003886 327 IKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP---DGKFLVFLSAKSSVDSGAHSAT 403 (789)
Q Consensus 327 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp---DG~~la~~s~~~~~~~g~~~~~ 403 (789)
....|+++|+ .+++......+...+....|+| +|+.|+..+.+.
T Consensus 188 ------~d~~i~i~d~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg---------- 234 (357)
T 3i2n_A 188 ------DNGDIKLFDL-----------------RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEG---------- 234 (357)
T ss_dssp ------TTSEEEEEET-----------------TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTT----------
T ss_pred ------cCCeEEEEEC-----------------ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCC----------
Confidence 2336888998 5555555555666788999999 999988776442
Q ss_pred ceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc----
Q 003886 404 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE---- 479 (789)
Q Consensus 404 ~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~---- 479 (789)
.|++||+.++....... ...... ....+..+.|+|+++.+++++..++...+|.++.....
T Consensus 235 -~i~i~d~~~~~~~~~~~----~~~~~~----------~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 235 -KFHVFDMRTQHPTKGFA----SVSEKA----------HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp -EEEEEEEEEEETTTEEE----EEEEEC----------CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred -eEEEEeCcCCCccccee----eeccCC----------CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 58889987644321100 000000 01134567899999877788888888888877642211
Q ss_pred --------------EEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 480 --------------LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 480 --------------~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
+..+......+....|+++++.++++.+... .+.+.++.
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~---~i~iw~~~ 352 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ---TVRVLIVT 352 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTS---EEEEEEEC
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCC---cEEEEECC
Confidence 2223333334455678888888876665443 35565554
No 247
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.39 E-value=2.2e-11 Score=131.43 Aligned_cols=198 Identities=15% Similarity=0.106 Sum_probs=127.9
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (789)
.||||++++..... ..+.+.++++.+ +.....+. .. +.+...+|||||++|+..++.. +..
T Consensus 141 fSpDg~~la~as~~-------~d~~i~iwd~~~-~~~~~~~~-~~-----~~V~~v~fspdg~~l~s~s~~~-----~~~ 201 (365)
T 4h5i_A 141 ISREGTVAAIASSK-------VPAIMRIIDPSD-LTEKFEIE-TR-----GEVKDLHFSTDGKVVAYITGSS-----LEV 201 (365)
T ss_dssp ECTTSSCEEEEESC-------SSCEEEEEETTT-TEEEEEEE-CS-----SCCCEEEECTTSSEEEEECSSC-----EEE
T ss_pred EcCCCCEEEEEECC-------CCCEEEEeECCC-CcEEEEeC-CC-----CceEEEEEccCCceEEecccee-----EEE
Confidence 47999998765432 345677777632 22122221 22 4588899999999999886543 555
Q ss_pred Ee-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCC
Q 003886 184 LW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEED 262 (789)
Q Consensus 184 i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 262 (789)
+| ..++...... ...... .+..++|||||+.++..+.+..
T Consensus 202 ~~~~~~~~~~~~~-~~~~~~------~v~~v~fspdg~~l~~~s~d~~-------------------------------- 242 (365)
T 4h5i_A 202 ISTVTGSCIARKT-DFDKNW------SLSKINFIADDTVLIAASLKKG-------------------------------- 242 (365)
T ss_dssp EETTTCCEEEEEC-CCCTTE------EEEEEEEEETTEEEEEEEESSS--------------------------------
T ss_pred EEeccCcceeeee-cCCCCC------CEEEEEEcCCCCEEEEEecCCc--------------------------------
Confidence 66 3443322221 112211 2378999999999998776532
Q ss_pred cccccCCccCceEEEEEccCCceEecc--C-CCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEE
Q 003886 263 WGETYAGKRQPSLFVININSGEVQAVK--G-IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 339 (789)
Q Consensus 263 ~g~~~~~~~~~~l~v~d~~~g~~~~l~--~-~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~ 339 (789)
....++.|++..+....+. . ......+..++|||||+. |+..+. +..|.+
T Consensus 243 --------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~----lasgs~---------------D~~V~i 295 (365)
T 4h5i_A 243 --------KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL----AVLASN---------------DNSIAL 295 (365)
T ss_dssp --------CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE----EEEEET---------------TSCEEE
T ss_pred --------ceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCc----eEEEcC---------------CCEEEE
Confidence 2245777887766543210 0 122335778999999997 776662 336888
Q ss_pred EecccccchhhhhhhhcCCCCCCCe-ee-cCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 340 VRVSLYKSEASELELKESSSEDLPV-VN-LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 340 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~-Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
+|+ .+++. .. +..+...+...+|||||++||..+.+. .|.+||++.+
T Consensus 296 wd~-----------------~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~-----------tvrvw~ip~~ 344 (365)
T 4h5i_A 296 VKL-----------------KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN-----------TIHIIKLPLN 344 (365)
T ss_dssp EET-----------------TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS-----------EEEEEECCTT
T ss_pred EEC-----------------CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC-----------eEEEEEcCCC
Confidence 898 55543 34 456778899999999999999888664 5889998754
No 248
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.39 E-value=1.8e-11 Score=133.57 Aligned_cols=264 Identities=16% Similarity=0.096 Sum_probs=149.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCcc-c--------cccCCCcccceeecCCCCEE
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVH-G--------SVYADGWFEGISWNSDETLI 222 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~-g--------~v~~d~~~~~~~wSpDg~~l 222 (789)
..+...+|||||++||...+. ...+| .+++....+....... . ..-.+..+..+.|||||+.|
T Consensus 65 ~~V~~v~fspdg~~la~g~~~------~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCNK------TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp SCCCEEEECTTSSEEEEECBS------CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CEEEEEEECCCCCEEEEEcCC------cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 347789999999999986532 13445 3444333332110000 0 00001124689999999999
Q ss_pred EEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEE
Q 003886 223 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW 302 (789)
Q Consensus 223 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~w 302 (789)
|..+.+.... .|+....+.......+...+....|.++....+++..+..|.+||+.+++.... ......+..++|
T Consensus 139 ~s~~~d~~i~--iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~ 214 (393)
T 1erj_A 139 ATGAEDRLIR--IWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT--LSIEDGVTTVAV 214 (393)
T ss_dssp EEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEE
T ss_pred EEEcCCCeEE--EEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE--EEcCCCcEEEEE
Confidence 9887765432 344322222222333444455667888866666777788999999999876544 233445778899
Q ss_pred ee-CCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeec-------CCCCCc
Q 003886 303 AP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL-------TESISS 373 (789)
Q Consensus 303 SP-Dg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~L-------t~~~~~ 373 (789)
+| ||+. |+..+. +..|.++|+ .++. ...+ ..+...
T Consensus 215 ~~~~~~~----l~~~s~---------------d~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 215 SPGDGKY----IAAGSL---------------DRAVRVWDS-----------------ETGFLVERLDSENESGTGHKDS 258 (393)
T ss_dssp CSTTCCE----EEEEET---------------TSCEEEEET-----------------TTCCEEEEEC------CCCSSC
T ss_pred ECCCCCE----EEEEcC---------------CCcEEEEEC-----------------CCCcEEEeecccccCCCCCCCC
Confidence 99 7776 665542 235777787 3333 2233 344556
Q ss_pred cCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccc--ee-eEEeeeeccCCCCCccccccCCCCCc
Q 003886 374 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK--IV-DVIPVVQCAEGDCFPGLYSSSILSNP 450 (789)
Q Consensus 374 ~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~--~~-~v~~~~~~~~~~~f~g~~~~~~~~~~ 450 (789)
+...+|+|||+.|+..+.+. .|.+||+.+......... .. ....+. | ....+..+.
T Consensus 259 v~~v~~~~~g~~l~s~s~d~-----------~v~~wd~~~~~~~~~~~~~~~~~~~~~~~---------~-h~~~v~~~~ 317 (393)
T 1erj_A 259 VYSVVFTRDGQSVVSGSLDR-----------SVKLWNLQNANNKSDSKTPNSGTCEVTYI---------G-HKDFVLSVA 317 (393)
T ss_dssp EEEEEECTTSSEEEEEETTS-----------EEEEEEC---------------CEEEEEE---------C-CSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCC-----------EEEEEECCCCCCcccccCCCCCcceEEEe---------c-ccCcEEEEE
Confidence 78899999999988766443 588999876433211000 00 000000 0 011234678
Q ss_pred cccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC
Q 003886 451 WLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE 487 (789)
Q Consensus 451 ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~ 487 (789)
|+++++.| +++..++. +..+|+.+++.......+
T Consensus 318 ~~~~~~~l-~sgs~D~~--v~iwd~~~~~~~~~l~~h 351 (393)
T 1erj_A 318 TTQNDEYI-LSGSKDRG--VLFWDKKSGNPLLMLQGH 351 (393)
T ss_dssp ECGGGCEE-EEEETTSE--EEEEETTTCCEEEEEECC
T ss_pred ECCCCCEE-EEEeCCCe--EEEEECCCCeEEEEECCC
Confidence 99999865 45555554 555688888766544433
No 249
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.38 E-value=2.5e-10 Score=123.86 Aligned_cols=275 Identities=11% Similarity=0.090 Sum_probs=164.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
+.+...+|||||++|+..+..+ ...+|+ .++....+.. .... ...++|+|||+.||..+.+...
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~---h~~~------v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDG-----RLIVWNALTSQKTHAIKL---HCPW------VMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEEC---CCTT------CCCCEECTTSSEEEECCSSSCC
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCccceEEec---CCCC------EEEEEECCCCCEEEEeeCCCcE
Confidence 4588999999999999877654 577884 3433333322 1112 2789999999999988766543
Q ss_pred CCCCccCCCC-------CCCCCCcCCCCCCCcceeeCCccc-ccCCccCceEEEEEccCCceEeccCC----CCCCccce
Q 003886 232 SKPTFSLGST-------KGGSSDKDCNSWKGQGDWEEDWGE-TYAGKRQPSLFVININSGEVQAVKGI----PKSLSVGQ 299 (789)
Q Consensus 232 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~g~-~~~~~~~~~l~v~d~~~g~~~~l~~~----~~~~~~~~ 299 (789)
. .|+.... ........+........|.++.+. .+++..+..|.+||+.+++.....+. .....+..
T Consensus 133 ~--iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 133 S--IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp E--EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred E--EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 3 2322111 111223344445555566665433 45566778999999999876544211 11234667
Q ss_pred EEEee-CCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcce
Q 003886 300 VVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPR 378 (789)
Q Consensus 300 ~~wSP-Dg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~ 378 (789)
+.|+| +++. |+..+ .+..|.++|+.. .......+..+.+.+...+
T Consensus 211 ~~~~~~~~~~----l~sgs---------------~D~~v~~wd~~~---------------~~~~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 211 LSINSLNANM----FISGS---------------CDTTVRLWDLRI---------------TSRAVRTYHGHEGDINSVK 256 (380)
T ss_dssp EEECSSSCCE----EEEEE---------------TTSCEEEEETTT---------------TCCCCEEECCCSSCCCEEE
T ss_pred EEeecCCCCE----EEEEE---------------CCCeEEEEECCC---------------CCcceEEECCcCCCeEEEE
Confidence 88877 6654 44443 233677888721 2234556777778899999
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEE
Q 003886 379 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 458 (789)
Q Consensus 379 ~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l 458 (789)
|+|||+.|+..+.+. .|.+||+.++......... ....+... ..+..+.|+|+|+.|
T Consensus 257 ~~p~~~~l~s~s~D~-----------~i~lwd~~~~~~~~~~~~~-------~~~~~~~~-----~~v~~~~~s~~g~~l 313 (380)
T 3iz6_a 257 FFPDGQRFGTGSDDG-----------TCRLFDMRTGHQLQVYNRE-------PDRNDNEL-----PIVTSVAFSISGRLL 313 (380)
T ss_dssp ECTTSSEEEEECSSS-----------CEEEEETTTTEEEEEECCC-------CSSSCCSS-----CSCSEEEECSSSSEE
T ss_pred EecCCCeEEEEcCCC-----------eEEEEECCCCcEEEEeccc-------cccccccc-----CceEEEEECCCCCEE
Confidence 999999988777553 5899998875432111000 00000001 124567899999965
Q ss_pred EEEEEeCCeEEEEEEECCCCcEEEec----C-CCCCceeEEeeecCCEEEE
Q 003886 459 LLSSIWGSSQVIISVNVSSGELLRIT----P-AESNFSWSLLTLDGDNIIA 504 (789)
Q Consensus 459 ~~~~~~~~~~~l~~~dl~tg~~~~lt----~-~~~~~~~~~~s~dg~~l~~ 504 (789)
+++..++. |+.+|+.+++...-. . ....+....|+++|+.|+.
T Consensus 314 -~~g~~dg~--i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 314 -FAGYSNGD--CYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp -EEECTTSC--EEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred -EEEECCCC--EEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence 45544554 555677777654322 2 2224455688999886543
No 250
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.38 E-value=3.5e-11 Score=129.28 Aligned_cols=269 Identities=13% Similarity=0.086 Sum_probs=163.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||||++|+..+.++ ...+|+ .++....+.... . +...+.|||||+.|+....+...
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg-----~v~vWd~~~~~~~~~~~~~~---~------~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDG-----KVIVWDSFTTNKEHAVTMPC---T------WVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEEEEEECSS---S------CCCEEEECTTSSEEEEESTTSEE
T ss_pred CeEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCCcceEEecCC---C------CEEEEEECCCCCEEEEeeCCCCE
Confidence 4588999999999999877654 577784 333333333221 1 23789999999999987665432
Q ss_pred CCCCccCCCCCC------CCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeC
Q 003886 232 SKPTFSLGSTKG------GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 305 (789)
Q Consensus 232 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPD 305 (789)
. .|....... ......+........|.++....+++..+..|.+||+++++..... ......+..+.|+|+
T Consensus 131 ~--v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 131 S--VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF-HGHGADVLCLDLAPS 207 (354)
T ss_dssp E--EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECCC
T ss_pred E--EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEEEEEEeC
Confidence 2 222111100 0111123334445567777656667777889999999998765431 122334567788774
Q ss_pred --CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCCCCccCcceecCC
Q 003886 306 --NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD 382 (789)
Q Consensus 306 --g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpD 382 (789)
|+. |+..+ .+..|.++|+ .+++ ...+..+...+...+|+||
T Consensus 208 ~~g~~----l~sgs---------------~Dg~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~ 251 (354)
T 2pbi_B 208 ETGNT----FVSGG---------------CDKKAMVWDM-----------------RSGQCVQAFETHESDVNSVRYYPS 251 (354)
T ss_dssp SSCCE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCCCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEeCC
Confidence 554 55444 2336888898 4444 4556666777889999999
Q ss_pred CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEE
Q 003886 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 462 (789)
Q Consensus 383 G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~ 462 (789)
|+.|+..+.+. .+.+||+.++..... .... ... ..+..+.|+|||+.| +++
T Consensus 252 ~~~l~s~s~D~-----------~v~lwd~~~~~~~~~----------~~~~-~~~------~~~~~~~~s~~g~~l-~~g 302 (354)
T 2pbi_B 252 GDAFASGSDDA-----------TCRLYDLRADREVAI----------YSKE-SII------FGASSVDFSLSGRLL-FAG 302 (354)
T ss_dssp SSEEEEEETTS-----------CEEEEETTTTEEEEE----------ECCT-TCC------SCEEEEEECTTSSEE-EEE
T ss_pred CCEEEEEeCCC-----------eEEEEECCCCcEEEE----------EcCC-Ccc------cceeEEEEeCCCCEE-EEE
Confidence 99988777543 488999876432110 0000 000 123356799999855 555
Q ss_pred EeCCeEEEEEEECCCCcEEEec-CCCCCceeEEeeecCCEEEEEE
Q 003886 463 IWGSSQVIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 463 ~~~~~~~l~~~dl~tg~~~~lt-~~~~~~~~~~~s~dg~~l~~~~ 506 (789)
..++...+| |+.+++..... .....+....|+++|+.|+...
T Consensus 303 ~~d~~i~vw--d~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 303 YNDYTINVW--DVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp ETTSCEEEE--ETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred ECCCcEEEE--ECCCCceEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 555555554 77677654443 3334555668899988766544
No 251
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1e-12 Score=133.13 Aligned_cols=166 Identities=19% Similarity=0.180 Sum_probs=103.1
Q ss_pred CCcEEEEEcCCCCCCCchhhH----HHHHHHHHCCcEEEEEcCCCCC------------------CCCch--hhccCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYS----KSLAFLSSVGYSLLIVNYRGSL------------------GFGEE--ALQSLPGK 646 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~----~~~~~la~~Gy~V~~~d~rGs~------------------G~G~~--~~~~~~~~ 646 (789)
+.|.||++||.+.+ ...|. .....|.++||.|+.+|+++.. |+|.. +.. .
T Consensus 4 ~~~~vl~lHG~g~~--~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~----~ 77 (243)
T 1ycd_A 4 QIPKLLFLHGFLQN--GKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFY----H 77 (243)
T ss_dssp CCCEEEEECCTTCC--HHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSC----C
T ss_pred cCceEEEeCCCCcc--HHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCccccc----C
Confidence 56899999996664 44443 3455677789999999998321 11211 110 0
Q ss_pred CCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCC------CceeEEEEeCCccchhhhhcCCCCCcc
Q 003886 647 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP------DKFVAAAARNPLCNLALMVGTTDIPDW 720 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p------~~~~a~v~~~pv~~~~~~~~~~~~~~~ 720 (789)
....+..|+.++++++.+....+..+++|+|||+||.+++.++.+++ ..++++++.++........ ...
T Consensus 78 ~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---~~~-- 152 (243)
T 1ycd_A 78 SEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---EHP-- 152 (243)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT---TST--
T ss_pred CCCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc---ccc--
Confidence 11112345666666665542234568999999999999999988642 2577888877764321110 000
Q ss_pred hhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 721 CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
+. . .+. .. + ......+.++++|+|++||++|.+||++++.++++.++
T Consensus 153 ------~~--~-~~~-----~~---~--~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~ 199 (243)
T 1ycd_A 153 ------GE--L-RIT-----EK---F--RDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYL 199 (243)
T ss_dssp ------TC--E-EEC-----GG---G--TTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred ------cc--c-ccc-----hh---H--HHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhh
Confidence 00 0 000 00 0 01122456789999999999999999999999988764
No 252
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.37 E-value=3.2e-11 Score=129.06 Aligned_cols=304 Identities=11% Similarity=0.030 Sum_probs=163.4
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (789)
.-.++|||+.++... ..+.+.++++.+............. ...+...+|||||++||..+...
T Consensus 21 ~l~~sp~g~~las~~---------~D~~i~iw~~~~~~~~~~~~~~~~h---~~~v~~~~~sp~g~~l~s~s~D~----- 83 (345)
T 3fm0_A 21 FLAWNPAGTLLASCG---------GDRRIRIWGTEGDSWICKSVLSEGH---QRTVRKVAWSPCGNYLASASFDA----- 83 (345)
T ss_dssp EEEECTTSSCEEEEE---------TTSCEEEEEEETTEEEEEEEECSSC---SSCEEEEEECTTSSEEEEEETTS-----
T ss_pred EEEECCCCCEEEEEc---------CCCeEEEEEcCCCcceeeeeecccc---CCcEEEEEECCCCCEEEEEECCC-----
Confidence 335679999887542 2334555555332110011110110 14588899999999999877653
Q ss_pred EEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCC---CCCCcCCCCCCC
Q 003886 181 QFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG---GSSDKDCNSWKG 255 (789)
Q Consensus 181 ~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 255 (789)
...+|+ .+....+..+. +..+.| ..++|+|||+.|+..+.+.... .|+...... ......+.....
T Consensus 84 ~v~iw~~~~~~~~~~~~~~-~h~~~v------~~v~~sp~~~~l~s~s~D~~v~--iwd~~~~~~~~~~~~~~~h~~~v~ 154 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLE-GHENEV------KSVAWAPSGNLLATCSRDKSVW--VWEVDEEDEYECVSVLNSHTQDVK 154 (345)
T ss_dssp CEEEEEECCC-EEEEEEEC-CCSSCE------EEEEECTTSSEEEEEETTSCEE--EEEECTTSCEEEEEEECCCCSCEE
T ss_pred cEEEEEccCCCeEEEEEcc-CCCCCc------eEEEEeCCCCEEEEEECCCeEE--EEECCCCCCeEEEEEecCcCCCeE
Confidence 345562 23222222222 222333 7899999999999888766432 333221111 011122333344
Q ss_pred cceeeCCcccccCCccCceEEEEEccCCceE---eccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeecc
Q 003886 256 QGDWEEDWGETYAGKRQPSLFVININSGEVQ---AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYN 332 (789)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~---~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~ 332 (789)
...|.++.....++..+..|.+||..+++.. .+ ......+..++|+|||+. |+..+.+
T Consensus 155 ~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~--~~h~~~v~~l~~sp~g~~----l~s~s~D------------- 215 (345)
T 3fm0_A 155 HVVWHPSQELLASASYDDTVKLYREEEDDWVCCATL--EGHESTVWSLAFDPSGQR----LASCSDD------------- 215 (345)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECTTSSE----EEEEETT-------------
T ss_pred EEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe--cCCCCceEEEEECCCCCE----EEEEeCC-------------
Confidence 5668888655556666788999999887643 33 223446789999999997 7766632
Q ss_pred CCcceEEEecccccchhhhhhhhcCCCCC-CCeeecCC-CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEee
Q 003886 333 RPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 410 (789)
Q Consensus 333 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt~-~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d 410 (789)
..|.+++............ ...... .....+.. +...+...+|+|+|..|+..+.+. .+.+|+
T Consensus 216 --~~v~iW~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----------~i~vw~ 280 (345)
T 3fm0_A 216 --RTVRIWRQYLPGNEQGVAC--SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDD-----------AIRVFQ 280 (345)
T ss_dssp --SCEEEEEEECTTCTTCCCC--C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTS-----------CEEEEE
T ss_pred --CeEEEeccccCCCCcccee--eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCC-----------eEEEEE
Confidence 2344444310000000000 000000 00112222 345577899999999998877553 477777
Q ss_pred cCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003886 411 WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (789)
Q Consensus 411 ~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~d 474 (789)
..++....... ........ .. +...+..+.|+|++..+++++..++...||.+.
T Consensus 281 ~~~~~~~~~~~-~~~~~~~~-~~--------h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 281 EDPNSDPQQPT-FSLTAHLH-QA--------HSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp ECTTSCTTSCC-EEEEEEET-TS--------SSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred eCCCCCcceee-EEEEeeec-cc--------ccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 76543211100 00000000 00 112355778999987677888888888888764
No 253
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.37 E-value=3e-10 Score=123.02 Aligned_cols=290 Identities=9% Similarity=0.001 Sum_probs=163.9
Q ss_pred EecCCCCC-ceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCC-CCCeEEEEecCCCCC
Q 003886 101 FNSGNGNG-TQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENES 178 (789)
Q Consensus 101 ~~~~spdg-~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~ 178 (789)
.-.++||| +.++... ..+.+.++++... .....+..... ...+...+||| +++.|+.....+
T Consensus 78 ~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~-~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d~--- 141 (383)
T 3ei3_B 78 SLEWHPTHPTTVAVGS---------KGGDIILWDYDVQ-NKTSFIQGMGP---GDAITGMKFNQFNTNQLFVSSIRG--- 141 (383)
T ss_dssp EEEECSSCTTEEEEEE---------BTSCEEEEETTST-TCEEEECCCST---TCBEEEEEEETTEEEEEEEEETTT---
T ss_pred EEEECCCCCCEEEEEc---------CCCeEEEEeCCCc-ccceeeecCCc---CCceeEEEeCCCCCCEEEEEeCCC---
Confidence 33457888 5554432 2345666666322 11122221111 14588999999 677777765543
Q ss_pred CeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcc
Q 003886 179 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (789)
Q Consensus 179 ~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (789)
.+.+| ..+...+.+.......+. +..+.|+||++.|+..+.
T Consensus 142 --~i~iwd~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~~~~~------------------------------ 183 (383)
T 3ei3_B 142 --ATTLRDFSGSVIQVFAKTDSWDYW------YCCVDVSVSRQMLATGDS------------------------------ 183 (383)
T ss_dssp --EEEEEETTSCEEEEEECCCCSSCC------EEEEEEETTTTEEEEEET------------------------------
T ss_pred --EEEEEECCCCceEEEeccCCCCCC------eEEEEECCCCCEEEEECC------------------------------
Confidence 45667 334333333322222122 378999999998887543
Q ss_pred eeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcce
Q 003886 258 DWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (789)
Q Consensus 258 ~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l 337 (789)
+..|.+||+.+.....+ ......+..++|+|+++. +++++. .+..|
T Consensus 184 --------------d~~i~i~d~~~~~~~~~--~~h~~~v~~~~~~~~~~~----~l~s~~--------------~d~~i 229 (383)
T 3ei3_B 184 --------------TGRLLLLGLDGHEIFKE--KLHKAKVTHAEFNPRCDW----LMATSS--------------VDATV 229 (383)
T ss_dssp --------------TSEEEEEETTSCEEEEE--ECSSSCEEEEEECSSCTT----EEEEEE--------------TTSEE
T ss_pred --------------CCCEEEEECCCCEEEEe--ccCCCcEEEEEECCCCCC----EEEEEe--------------CCCEE
Confidence 25799999966556666 233456789999999996 666552 23368
Q ss_pred EEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecC-CCCEEEEEecCCCCCCCCccccceeEEeecCCCCC
Q 003886 338 YAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp-DG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
.++|+.... ..+.......+...+...+|+| ||+.|+..+.+. .|.+||+.++..
T Consensus 230 ~iwd~~~~~-------------~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~-----------~i~iwd~~~~~~ 285 (383)
T 3ei3_B 230 KLWDLRNIK-------------DKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRN-----------EIRVYSSYDWSK 285 (383)
T ss_dssp EEEEGGGCC-------------STTCEEEEEECSSCEEEEEECTTTSCEEEEEESSS-----------EEEEEETTBTTS
T ss_pred EEEeCCCCC-------------cccceEEEecCCCceEEEEEcCCCCCEEEEEcCCC-----------cEEEEECCCCcc
Confidence 888873100 1133333335667788999999 999998777543 699999987654
Q ss_pred CCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEE------eCCeEEEEEEECCCCcEEEecCC---C
Q 003886 417 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI------WGSSQVIISVNVSSGELLRITPA---E 487 (789)
Q Consensus 417 ~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~------~~~~~~l~~~dl~tg~~~~lt~~---~ 487 (789)
......... . .+. +. ......|+|++..+.+... ......|..+|+.+++....... .
T Consensus 286 ~~~~~~~~~--~--------~~~--~~-~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~ 352 (383)
T 3ei3_B 286 PDQIIIHPH--R--------QFQ--HL-TPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAA 352 (383)
T ss_dssp CSEEEECCB--C--------CCT--TS-CCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBC
T ss_pred ccccccccc--c--------ccc--cc-cceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCC
Confidence 321111000 0 000 00 1112356666654433221 11234566778888876544332 2
Q ss_pred CCceeEEeeecCCEEEEEEeCCCCCCeEEEEee
Q 003886 488 SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (789)
Q Consensus 488 ~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~ 520 (789)
.......|+++++.|+.. ++ ..|.+.++
T Consensus 353 ~~~~~~~~s~~g~~l~s~-sd----~~i~iw~~ 380 (383)
T 3ei3_B 353 GIISLNKFSPTGDVLASG-MG----FNILIWNR 380 (383)
T ss_dssp SCCCEEEECTTSSEEEEE-ET----TEEEEEEC
T ss_pred ceEEEEEEecCccEEEEe-cC----CcEEEEec
Confidence 233444789999877555 32 34666554
No 254
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.36 E-value=7.2e-12 Score=134.84 Aligned_cols=295 Identities=12% Similarity=0.031 Sum_probs=159.9
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
..||||++++-..... .......+++++....... ..+..... ....++...+|||||+.|+ .+.. + .+
T Consensus 49 ~fSpDG~~las~s~d~---~~~wd~~v~~~~~~~~~~~-~~~~~~~~-~~~~~V~~~~~s~d~~~l~-~s~d--g---~v 117 (357)
T 4g56_B 49 RYRRDGALLLAASSLS---SRTWGGSIWVFKDPEGAPN-ESLCTAGV-QTEAGVTDVAWVSEKGILV-ASDS--G---AV 117 (357)
T ss_dssp EECSSSCEEEEEECSS---SSSCCEEEEEESSCC---C-GGGCSEEE-ECSSCEEEEEEETTTEEEE-EETT--S---CE
T ss_pred EECCCCCEEEEEcCCC---CccccCeEEEEECCCCCcc-eeEecccC-CCCCCEEEEEEcCCCCEEE-EECC--C---EE
Confidence 3479999886543211 1112456777765322111 11110000 0014588999999997664 3332 2 25
Q ss_pred EEec--CCceeEEEecC-CCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCccee
Q 003886 183 ELWS--QSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (789)
Q Consensus 183 ~i~~--~~~~~~~~~~~-~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (789)
.+|+ .++........ .+..+.| ..++|||||+.|+..+.+.... .|+............+...+....|
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V------~~v~~spdg~~l~sgs~dg~v~--iwd~~~~~~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIV------KTLSVFSDGTQAVSGGKDFSVK--VWDLSQKAVLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp EEC--------CCCCEEECCCSSCE------EEEEECSSSSEEEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEeeccccceeEEEeeccCCCCCCE------EEEEECCCCCEEEEEeCCCeEE--EEECCCCcEEEEEcCCCCCEEEEEE
Confidence 5662 22221111111 1122233 7899999999999887765432 3433222222222333344444567
Q ss_pred eCCcccc-cCCccCceEEEEEccCCceEecc-CCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcce
Q 003886 260 EEDWGET-YAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (789)
Q Consensus 260 ~~d~g~~-~~~~~~~~l~v~d~~~g~~~~l~-~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l 337 (789)
.++.... .+...+..|.+||+.+++..... .......+..++|+||+.. ++.++. ....|
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~----~la~g~--------------~d~~i 251 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD----TFACGD--------------ETGNV 251 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT----EEEEEE--------------SSSCE
T ss_pred ccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc----eEEEee--------------cccce
Confidence 6664333 34555678999999888754431 1223345678999999887 666653 22368
Q ss_pred EEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCE-EEEEecCCCCCCCCccccceeEEeecCCCCC
Q 003886 338 YAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~-la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
+++|+. .......+..+...+...+|||||+. |+..+.+ ..|++||+.+++.
T Consensus 252 ~~wd~~----------------~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D-----------~~i~iwd~~~~~~ 304 (357)
T 4g56_B 252 SLVNIK----------------NPDSAQTSAVHSQNITGLAYSYHSSPFLASISED-----------CTVAVLDADFSEV 304 (357)
T ss_dssp EEEESS----------------CGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT-----------SCEEEECTTSCEE
T ss_pred eEEECC----------------CCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC-----------CEEEEEECCCCcE
Confidence 888872 23345566666777889999999865 5555533 2589999877543
Q ss_pred CCcccceeeEEeeeeccCCCCCccccccCCCCCcccc-CCCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003886 417 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (789)
Q Consensus 417 ~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~-Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~l 483 (789)
.... +. ...+..++|+| |++ +++++..++...+|.++. .++...+
T Consensus 305 ~~~~-~H-------------------~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~~-~~~~~~~ 350 (357)
T 4g56_B 305 FRDL-SH-------------------RDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLPS-EGRTENL 350 (357)
T ss_dssp EEEC-CC-------------------SSCEEEEEECSSSTT-EEEEEETTSCEEEEECC---------
T ss_pred eEEC-CC-------------------CCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECCC-CCccccc
Confidence 2111 10 11244678998 777 456777777777776543 3444333
No 255
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.06 E-value=5.4e-14 Score=146.77 Aligned_cols=109 Identities=17% Similarity=0.330 Sum_probs=77.4
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
+.|+||++||.+.+ ...|......|+ +||.|+++|+|| +|.+..............+++.+.+..+++. ++.
T Consensus 24 ~~p~vv~lHG~~~~--~~~~~~~~~~l~-~g~~v~~~D~~G---~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~--l~~ 95 (304)
T 3b12_A 24 SGPALLLLHGFPQN--LHMWARVAPLLA-NEYTVVCADLRG---YGGSSKPVGAPDHANYSFRAMASDQRELMRT--LGF 95 (304)
Confidence 45789999997764 446666777787 899999999998 5554432110001222344444444444443 345
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccc
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~ 707 (789)
+++.|+|||+||.+++.++.++|++++++|+.+|...
T Consensus 96 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (304)
T 3b12_A 96 ERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132 (304)
Confidence 6899999999999999999999999999999998654
No 256
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.35 E-value=2e-12 Score=133.95 Aligned_cols=184 Identities=10% Similarity=0.011 Sum_probs=107.3
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
..|.||++||.+++ ...|......|++ ||.|+++|+|| +|.+... .....++++.+.+..+++.- .+.
T Consensus 50 ~~~~lvllHG~~~~--~~~~~~l~~~L~~-~~~v~~~D~~G---~G~S~~~-----~~~~~~~~~a~~~~~~l~~~-~~~ 117 (280)
T 3qmv_A 50 APLRLVCFPYAGGT--VSAFRGWQERLGD-EVAVVPVQLPG---RGLRLRE-----RPYDTMEPLAEAVADALEEH-RLT 117 (280)
T ss_dssp CSEEEEEECCTTCC--GGGGTTHHHHHCT-TEEEEECCCTT---SGGGTTS-----CCCCSHHHHHHHHHHHHHHT-TCS
T ss_pred CCceEEEECCCCCC--hHHHHHHHHhcCC-CceEEEEeCCC---CCCCCCC-----CCCCCHHHHHHHHHHHHHHh-CCC
Confidence 34889999997764 5567777778876 99999999998 6655322 12234556555555555441 145
Q ss_pred ccEEEEEcCccHHHHHHHHHhCCCcee----EEEEeCCccchhhhh-cCCCCCcchhh---hhccCcccc-----ccCCC
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQAPDKFV----AAAARNPLCNLALMV-GTTDIPDWCYV---ESYGSKGKD-----SFTES 737 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~p~~~~----a~v~~~pv~~~~~~~-~~~~~~~~~~~---~~~~~~~~~-----~~~~~ 737 (789)
+++.|+|||+||.+++.++.++|++++ .+++.++........ .........+. ..++..... .+...
T Consensus 118 ~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (280)
T 3qmv_A 118 HDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDR 197 (280)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCT
T ss_pred CCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHH
Confidence 789999999999999999999887766 666654332110000 00000000000 000000000 00000
Q ss_pred CC---hhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 738 PS---VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 738 ~~---~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.. .........+.+ ..+.++++|+|+++|++|..+|++.+..+.+.++.
T Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 249 (280)
T 3qmv_A 198 RLPVLRADLRACERYDW-HPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTG 249 (280)
T ss_dssp THHHHHHHHHHHHTCCC-CCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSS
T ss_pred HHHHHHHHHHHHHhccc-cCCCceecCeEEEEecCCCCcChHHHHHHHHhcCC
Confidence 00 001111112211 22578899999999999999999999888877654
No 257
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.35 E-value=1.9e-11 Score=146.69 Aligned_cols=239 Identities=9% Similarity=-0.001 Sum_probs=148.5
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (789)
.-.++|||++++.... .+.+.++++. .+.....++... +.+..++|||||++|+.....+
T Consensus 18 ~i~~sp~~~~la~~~~---------~g~v~iwd~~-~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg----- 77 (814)
T 3mkq_A 18 GIDFHPTEPWVLTTLY---------SGRVEIWNYE-TQVEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDF----- 77 (814)
T ss_dssp EEEECSSSSEEEEEET---------TSEEEEEETT-TTEEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTS-----
T ss_pred EEEECCCCCEEEEEeC---------CCEEEEEECC-CCceEEEEecCC-----CcEEEEEEeCCCCEEEEEeCCC-----
Confidence 3356799998887532 2356666652 222233444333 4588999999999999987643
Q ss_pred EEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCC-CCCCCCcCCCCCCCcc
Q 003886 181 QFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQG 257 (789)
Q Consensus 181 ~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 257 (789)
.+.+| ..++....+.. ..+.| ..+.|||||++|+..+.+.... .|+.... ........+.......
T Consensus 78 ~i~vw~~~~~~~~~~~~~---~~~~v------~~~~~s~~~~~l~~~~~dg~i~--vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEA---HPDYI------RSIAVHPTKPYVLSGSDDLTVK--LWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp EEEEEETTTCCEEEEEEC---CSSCE------EEEEECSSSSEEEEEETTSEEE--EEEGGGTSEEEEEEECCSSCEEEE
T ss_pred eEEEEECCCCcEEEEEec---CCCCE------EEEEEeCCCCEEEEEcCCCEEE--EEECCCCceEEEEEcCCCCcEEEE
Confidence 45666 34444433332 11222 7899999999999877654332 2332111 1111222333444556
Q ss_pred eeeC-CcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEee--CCCCCccEEEEEeecCCceeeeeeeeccCC
Q 003886 258 DWEE-DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP--LNEGLHQYLVFVGWSSETRKLGIKYCYNRP 334 (789)
Q Consensus 258 ~~~~-d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP--Dg~~~~~~l~f~~~~~~~~~~g~~~~~~~~ 334 (789)
.|.+ +....+++..+..|.+||+.+++............+..+.|+| ||+. |+..+ ..
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----l~~~~---------------~d 207 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY----MITAS---------------DD 207 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE----EEEEC---------------TT
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE----EEEEe---------------CC
Confidence 7888 5444455666789999999877543331122335677899999 8886 66554 22
Q ss_pred cceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 335 CALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 335 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
..|.++|+. .......+..+...+...+|+|||+.|+..+.+. .|++||+.++
T Consensus 208 g~i~~~d~~----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------~v~vwd~~~~ 260 (814)
T 3mkq_A 208 LTIKIWDYQ----------------TKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG-----------TLKIWNSSTY 260 (814)
T ss_dssp SEEEEEETT----------------TTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS-----------CEEEEETTTC
T ss_pred CEEEEEECC----------------CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC-----------eEEEEECCCC
Confidence 368888872 2233455666667788999999999888776543 4889998775
Q ss_pred CC
Q 003886 415 GN 416 (789)
Q Consensus 415 ~~ 416 (789)
..
T Consensus 261 ~~ 262 (814)
T 3mkq_A 261 KV 262 (814)
T ss_dssp SE
T ss_pred cE
Confidence 43
No 258
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.35 E-value=3.8e-11 Score=128.19 Aligned_cols=272 Identities=8% Similarity=0.028 Sum_probs=157.8
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
.++|||+.++-. ...+.+.++++.. +.....+.... ..+...+|||+|++|+.....+ ..
T Consensus 62 ~~s~d~~~l~s~---------s~Dg~v~iWd~~~-~~~~~~~~~~~-----~~v~~~~~s~~~~~l~s~~~d~-----~v 121 (340)
T 1got_B 62 HWGTDSRLLLSA---------SQDGKLIIWDSYT-TNKVHAIPLRS-----SWVMTCAYAPSGNYVACGGLDN-----IC 121 (340)
T ss_dssp EECTTSSEEEEE---------ETTTEEEEEETTT-CCEEEEEECSS-----SCEEEEEECTTSSEEEEEETTC-----EE
T ss_pred EECCCCCEEEEE---------eCCCcEEEEECCC-CCcceEeecCC-----ccEEEEEECCCCCEEEEEeCCC-----eE
Confidence 346888766532 2234566666532 22222222222 4577889999999999876543 45
Q ss_pred EEec--CCc-eeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCccee
Q 003886 183 ELWS--QSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (789)
Q Consensus 183 ~i~~--~~~-~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (789)
.+|+ .++ ..+......+..+.+ ..+.|+|+++ |+..+.+.... .|+............+........|
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v------~~~~~~~~~~-l~s~s~d~~i~--~wd~~~~~~~~~~~~h~~~v~~~~~ 192 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYL------SCCRFLDDNQ-IVTSSGDTTCA--LWDIETGQQTTTFTGHTGDVMSLSL 192 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCE------EEEEEEETTE-EEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEECccCCCcceeEEEecCCCccE------EEEEECCCCc-EEEEECCCcEE--EEECCCCcEEEEEcCCCCceEEEEE
Confidence 6662 211 112221111222233 6889999986 66665554322 3443222222222334444445667
Q ss_pred eCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEE
Q 003886 260 EEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 339 (789)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~ 339 (789)
.++....+++..+..|.+||+.+++..... ......+..++|+|||+. |+..+ .+..|.+
T Consensus 193 ~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~----l~s~s---------------~d~~v~i 252 (340)
T 1got_B 193 APDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESDINAICFFPNGNA----FATGS---------------DDATCRL 252 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCeeEEEE-cCCcCCEEEEEEcCCCCE----EEEEc---------------CCCcEEE
Confidence 777555556667889999999988765431 233446788999999987 66655 2336788
Q ss_pred EecccccchhhhhhhhcCCCCCCC-eeecCCC--CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCC
Q 003886 340 VRVSLYKSEASELELKESSSEDLP-VVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 340 ~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~--~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
+|+ .++. ...+... ...+...+|||||+.|+..+.+ ..|.+||+.++..
T Consensus 253 wd~-----------------~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----------~~i~vwd~~~~~~ 304 (340)
T 1got_B 253 FDL-----------------RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-----------FNCNVWDALKADR 304 (340)
T ss_dssp EET-----------------TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------SEEEEEETTTCCE
T ss_pred EEC-----------------CCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC-----------CeEEEEEcccCcE
Confidence 887 3332 2233222 2346788999999998876644 2599999876443
Q ss_pred CCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003886 417 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (789)
Q Consensus 417 ~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (789)
.....+ +...+..+.|+|||+.| +++..++...||
T Consensus 305 ~~~~~~-------------------h~~~v~~~~~s~dg~~l-~s~s~D~~i~iW 339 (340)
T 1got_B 305 AGVLAG-------------------HDNRVSCLGVTDDGMAV-ATGSWDSFLKIW 339 (340)
T ss_dssp EEEEEC-------------------CSSCEEEEEECTTSSCE-EEEETTSCEEEE
T ss_pred eeEeec-------------------CCCcEEEEEEcCCCCEE-EEEcCCccEEec
Confidence 211000 01134467899999855 566677777776
No 259
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.35 E-value=3.2e-11 Score=132.41 Aligned_cols=273 Identities=7% Similarity=0.015 Sum_probs=157.8
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
.....|+|||++|+.....+ .+.+|+-......... ....+.| ..+.|+|||+.|+..+.+.... .
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~-~~h~~~v------~~~~~~~~~~~l~s~s~d~~i~--i 165 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEG-----DIKVLDSNFNLQREID-QAHVSEI------TKLKFFPSGEALISSSQDMQLK--I 165 (420)
T ss_dssp EEEEEECSSSCEEEEEETTS-----CEEEECTTSCEEEEET-TSSSSCE------EEEEECTTSSEEEEEETTSEEE--E
T ss_pred eEEEEEecCCCEEEEEECCC-----CEEEEeCCCcceeeec-ccccCcc------EEEEECCCCCEEEEEeCCCeEE--E
Confidence 44567999999999886653 4567732222222221 1222333 7899999999998887665332 3
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCC--C--------------------
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP--K-------------------- 293 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~--~-------------------- 293 (789)
|+............+........|.++....+++..+..|.+||+.+++........ .
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 245 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEI 245 (420)
T ss_dssp EETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGG
T ss_pred EeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeec
Confidence 443333333333445555556778888666666777888999999988765441110 0
Q ss_pred -CCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecC-CC
Q 003886 294 -SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLT-ES 370 (789)
Q Consensus 294 -~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt-~~ 370 (789)
...+..+.|+|||+. |+..+ ....|.++|+ .++. ...+. .+
T Consensus 246 ~~~~v~~~~~s~~~~~----l~~~~---------------~dg~i~i~d~-----------------~~~~~~~~~~~~~ 289 (420)
T 3vl1_A 246 STSKKNNLEFGTYGKY----VIAGH---------------VSGVITVHNV-----------------FSKEQTIQLPSKF 289 (420)
T ss_dssp CCCCCCTTCSSCTTEE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCTT
T ss_pred ccCcccceEEcCCCCE----EEEEc---------------CCCeEEEEEC-----------------CCCceeEEccccc
Confidence 123445677888886 65554 2336888887 3333 33343 34
Q ss_pred CCccCcceecCCCC-EEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCC
Q 003886 371 ISSAFFPRFSPDGK-FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 449 (789)
Q Consensus 371 ~~~~~~p~~SpDG~-~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~ 449 (789)
...+...+|+|||+ .|+..+.+ ..|++||+.+++..... +. .... ..+..
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~d-----------g~i~vwd~~~~~~~~~~-----~~----~~~~--------~~v~~- 340 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYEN-----------GMLAQWDLRSPECPVGE-----FL----INEG--------TPINN- 340 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETT-----------SEEEEEETTCTTSCSEE-----EE----ESTT--------SCEEE-
T ss_pred CCCceeEEEeCCCCCEEEEEeCC-----------CeEEEEEcCCCcCchhh-----hh----ccCC--------CCceE-
Confidence 56788999999999 66555533 36999999875431100 00 0000 01122
Q ss_pred ccccCCCEEEEEEEeCCeEEEEEEECCC--------CcEEEecCCCCCceeEEeeecCC---EEEEEEeC
Q 003886 450 PWLSDGCTMLLSSIWGSSQVIISVNVSS--------GELLRITPAESNFSWSLLTLDGD---NIIAVSSS 508 (789)
Q Consensus 450 ~ws~Dg~~l~~~~~~~~~~~l~~~dl~t--------g~~~~lt~~~~~~~~~~~s~dg~---~l~~~~ss 508 (789)
.+.++++ +++++..++...+|.+.... .....+......+....|++++. .++++.+.
T Consensus 341 ~~~~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~ 409 (420)
T 3vl1_A 341 VYFAAGA-LFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKN 409 (420)
T ss_dssp EEEETTE-EEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETT
T ss_pred EEeCCCC-EEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCC
Confidence 3556776 55666666666666554311 11223333333445567888887 67766653
No 260
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.34 E-value=5e-11 Score=131.51 Aligned_cols=290 Identities=11% Similarity=0.000 Sum_probs=165.9
Q ss_pred EEeCCCCCeEEEEecCCC------------CCCeEEEEec-CCceeEEEe--cCCCccccccCCCcccceeecCCCCEEE
Q 003886 159 VVPSPSGSKLLVVRNPEN------------ESPIQFELWS-QSQLEKEFH--VPQTVHGSVYADGWFEGISWNSDETLIA 223 (789)
Q Consensus 159 ~~~SPdG~~la~~~~~~~------------~~~~~~~i~~-~~~~~~~~~--~~~~~~g~v~~d~~~~~~~wSpDg~~la 223 (789)
|.|+|+++.++++..... +...++.++. ++....+.. ..... ..++|+| +++++
T Consensus 69 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~-~~~~~ 137 (433)
T 3bws_A 69 PVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQP----------KSVRFID-NTRLA 137 (433)
T ss_dssp ECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCB----------CCCEESS-SSEEE
T ss_pred eeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCc----------eEEEEeC-CCeEE
Confidence 449999888877654321 1124555542 232222222 22222 5799999 45566
Q ss_pred EEeecCCCCCCCccCCCCCCCC-----CCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccc
Q 003886 224 YVAEEPSPSKPTFSLGSTKGGS-----SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVG 298 (789)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~ 298 (789)
++..... ....|+........ ....+........|.++....+.+.....|++||+++++..... ......+.
T Consensus 138 ~~~~~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~ 215 (433)
T 3bws_A 138 IPLLEDE-GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSK 215 (433)
T ss_dssp EEBTTSS-SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEE
T ss_pred EEeCCCC-eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-cCCCCCee
Confidence 6543321 11223322211111 01112222223456555333334445688999999988765441 22334677
Q ss_pred eEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcce
Q 003886 299 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPR 378 (789)
Q Consensus 299 ~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~ 378 (789)
.++|+|||+. +++++.. ...|+++|+ .+++..............+
T Consensus 216 ~~~~~~~~~~----l~~~~~~--------------~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~ 260 (433)
T 3bws_A 216 ILLYDPIRDL----VYCSNWI--------------SEDISVIDR-----------------KTKLEIRKTDKIGLPRGLL 260 (433)
T ss_dssp EEEEETTTTE----EEEEETT--------------TTEEEEEET-----------------TTTEEEEECCCCSEEEEEE
T ss_pred EEEEcCCCCE----EEEEecC--------------CCcEEEEEC-----------------CCCcEEEEecCCCCceEEE
Confidence 8999999997 6655521 236899998 4555444444444578899
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEE
Q 003886 379 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 458 (789)
Q Consensus 379 ~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l 458 (789)
|+|||+.|+..+....... .....|++||+.+++........ ..+..+.|+|||+.+
T Consensus 261 ~~~~g~~l~~~~~~~~~~~---~~dg~i~~~d~~~~~~~~~~~~~--------------------~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQE---SGGGRLGIYSMDKEKLIDTIGPP--------------------GNKRHIVSGNTENKI 317 (433)
T ss_dssp ECTTSSEEEEEEEESCTTC---SCCEEEEEEETTTTEEEEEEEEE--------------------ECEEEEEECSSTTEE
T ss_pred EcCCCCEEEEEECCCCccc---cCCCeEEEEECCCCcEEeeccCC--------------------CCcceEEECCCCCEE
Confidence 9999999888775431100 02347999998875432111000 012356899999988
Q ss_pred EEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCC-----------CeEEEEeec
Q 003886 459 LLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDV-----------PQVKYGYFV 521 (789)
Q Consensus 459 ~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p-----------~~i~~~~~~ 521 (789)
+++...++ .|+.+|+.+++...............++++|+.++........+ ..+++.++.
T Consensus 318 ~~~~~~~~--~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 318 YVSDMCCS--KIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp EEEETTTT--EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred EEEecCCC--EEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 88765555 56667888888766555444455668899999887777654432 256666654
No 261
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.34 E-value=6.9e-12 Score=126.83 Aligned_cols=168 Identities=10% Similarity=0.067 Sum_probs=102.7
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHH--CCcEEEEEcCCCCCC------CCchhhccCCCC-
Q 003886 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSLG------FGEEALQSLPGK- 646 (789)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~--~Gy~V~~~d~rGs~G------~G~~~~~~~~~~- 646 (789)
+...++.|+ .+.+++||++||.+.. ...+......|.. .++.+++|+-.-.+. .|..|.......
T Consensus 25 l~y~ii~P~----~~~~~~VI~LHG~G~~--~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~ 98 (246)
T 4f21_A 25 MNYELMEPA----KQARFCVIWLHGLGAD--GHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDA 98 (246)
T ss_dssp CCEEEECCS----SCCCEEEEEEEC--CC--CCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC--
T ss_pred cCceEeCCC----CcCCeEEEEEcCCCCC--HHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccc
Confidence 556678885 3456899999996553 3344444444432 368889887531100 011111110000
Q ss_pred ------CCcccHHHHHHHHHHH----HHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCC
Q 003886 647 ------VGSQDVNDVLTAIDHV----IDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD 716 (789)
Q Consensus 647 ------~~~~~~~D~~~~i~~l----~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~ 716 (789)
.....+.+..+.++.+ .+. .+|.+||.++|+|+||++++.++.++|++|+++|+.++........
T Consensus 99 ~~~~~~~d~~~i~~~~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~---- 173 (246)
T 4f21_A 99 NSLNRVVDVEGINSSIAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNF---- 173 (246)
T ss_dssp -CGGGGSCCC-CHHHHHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHH----
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccc----
Confidence 0011122333333333 333 3899999999999999999999999999999999998854211100
Q ss_pred CCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 717 IPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
.. +. .....++|+|++||++|++||++.+.++++.|++
T Consensus 174 ----------~~-------------------~~----~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~ 211 (246)
T 4f21_A 174 ----------KG-------------------KI----TSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKV 211 (246)
T ss_dssp ----------ST-------------------TC----CGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHT
T ss_pred ----------cc-------------------cc----cccccCCchhhcccCCCCccCHHHHHHHHHHHHH
Confidence 00 00 0112357999999999999999999999998864
No 262
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.34 E-value=6.5e-11 Score=124.14 Aligned_cols=264 Identities=12% Similarity=0.081 Sum_probs=158.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||||++|+.....+ ...+|+ .++..+.+... .+.+ ..+.|+||++.|+..+.+...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg-----~v~lWd~~~~~~~~~~~~~---~~~v------~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVELWNYETQVEVRSIQVT---ETPV------RAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECC---SSCE------EEEEEEGGGTEEEEEETTSEE
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCceeEEeecc---CCcE------EEEEEeCCCCEEEEECCCCEE
Confidence 4588999999999999876554 567773 34333333321 1122 689999999999988776543
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCc-eEeccCCCCCCccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~-~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
+ .|+............+........|.++....+++..+..|.+||+.++. ..... ......+..++|+|++..
T Consensus 80 ~--vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~-- 154 (304)
T 2ynn_A 80 R--VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPS-- 154 (304)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE-CCCCSCEEEEEECTTCTT--
T ss_pred E--EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh-cccCCcEEEEEECCCCCC--
Confidence 3 34433333223334455556667788886666677778899999998873 33321 233446788999995443
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecC-CCCCccCcceecC--CCCEEE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSP--DGKFLV 387 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~Sp--DG~~la 387 (789)
++.++. .+..|.++|+. .......+. .....+....|+| |+++|+
T Consensus 155 --~l~sgs--------------~D~~v~iwd~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (304)
T 2ynn_A 155 --TFASGC--------------LDRTVKVWSLG----------------QSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (304)
T ss_dssp --EEEEEE--------------TTSEEEEEETT----------------CSSCSEEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred --EEEEEe--------------CCCeEEEEECC----------------CCCccceeccCCcCcEEEEEEEEcCCCCEEE
Confidence 444442 22367788872 222222332 2334455667765 788887
Q ss_pred EEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCe
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 467 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~ 467 (789)
..+.+. .|.+||+.++.......+. ...+....|+|+++. ++++..++.
T Consensus 203 s~s~D~-----------~i~iWd~~~~~~~~~~~~h-------------------~~~v~~~~~~p~~~~-l~s~s~Dg~ 251 (304)
T 2ynn_A 203 TASDDL-----------TIKIWDYQTKSCVATLEGH-------------------MSNVSFAVFHPTLPI-IISGSEDGT 251 (304)
T ss_dssp EEETTS-----------EEEEEETTTTEEEEEEECC-------------------SSCEEEEEECSSSSE-EEEEETTSC
T ss_pred EEcCCC-----------eEEEEeCCCCccceeeCCC-------------------CCCEEEEEECCCCCE-EEEEcCCCe
Confidence 766543 5999998775432110000 012345679999984 466666666
Q ss_pred EEEEEEECCCCcEEEecCCC-CCceeEEeeecCCE
Q 003886 468 QVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDN 501 (789)
Q Consensus 468 ~~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~ 501 (789)
..|| |+.+++..+....+ .......++++++.
T Consensus 252 i~iW--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 252 LKIW--NSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (304)
T ss_dssp EEEE--ETTTCCEEEEECCSSSSEEEEEECTTCGG
T ss_pred EEEE--ECCCCceeeeccCCCccEEEEEECCCCCc
Confidence 6665 77788776554433 23333455676654
No 263
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.34 E-value=1.1e-10 Score=124.91 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=129.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||||++|+..+..+ .+.+|+ .++..+.+. +..+.| ..+.|+||++.++.++..
T Consensus 128 ~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~~~~~~~~~---~h~~~V------~~~~~~~~~~~~l~s~s~--- 190 (344)
T 4gqb_B 128 DIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQQVVLSSYR---AHAAQV------TCVAASPHKDSVFLSCSE--- 190 (344)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSSCE------EEEEECSSCTTEEEEEET---
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEc---CcCCce------EEEEecCCCCCceeeecc---
Confidence 4588999999999999876654 466773 444333332 222333 789999999765544322
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
+..|.+||+.+++.... ........+..++|+|++..
T Consensus 191 ----------------------------------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-- 228 (344)
T 4gqb_B 191 ----------------------------------------DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE-- 228 (344)
T ss_dssp ----------------------------------------TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTT--
T ss_pred ----------------------------------------ccccccccccccceeeeeecceeeccceeeeecCCCCc--
Confidence 25688999998875443 21122334678999998877
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCE-EEEE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF-LVFL 389 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~-la~~ 389 (789)
++.++. .+..|.++|+. .+.....+..+...+...+|||||.. |+..
T Consensus 229 --~l~sg~--------------~dg~v~~wd~~----------------~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 229 --VFVFGD--------------ENGTVSLVDTK----------------STSCVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp --EEEEEE--------------TTSEEEEEESC----------------C--CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred --ceEEec--------------cCCcEEEEECC----------------CCcEEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 666552 22368888872 33345677777778889999999964 5555
Q ss_pred ecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEE
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (789)
+.+. .|++||+.+++...+ .+ +...+..+.|+|||+.|+.++..++...
T Consensus 277 s~D~-----------~i~vwd~~~~~~~~~-~~-------------------H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 277 SEDC-----------SLAVLDSSLSELFRS-QA-------------------HRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp ETTS-----------CEEEECTTCCEEEEE-CC-------------------CSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred eCCC-----------eEEEEECCCCcEEEE-cC-------------------CCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 5432 589999877543211 01 1113456789999998888888888777
Q ss_pred EEEEE
Q 003886 470 IISVN 474 (789)
Q Consensus 470 l~~~d 474 (789)
+|.++
T Consensus 326 ~w~v~ 330 (344)
T 4gqb_B 326 HHVVP 330 (344)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 264
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.34 E-value=2.2e-13 Score=151.98 Aligned_cols=208 Identities=16% Similarity=0.167 Sum_probs=125.3
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-hhHHHHHHHHHCC-cEEEEEcCC-CCCCCCchhhccCCCC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVG-YSLLIVNYR-GSLGFGEEALQSLPGK 646 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~~~la~~G-y~V~~~d~r-Gs~G~G~~~~~~~~~~ 646 (789)
+.|+.. ..++.|.. ..+++|+||++|||++..... .+......|+++| ++|+.+||| |..|++...... ...
T Consensus 79 ~edcL~--l~v~~P~~--~~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~ 153 (489)
T 1qe3_A 79 SEDCLY--VNVFAPDT--PSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAY 153 (489)
T ss_dssp CSCCCE--EEEEEECS--SCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTS
T ss_pred CCCCCE--EEEEeCCC--CCCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcccccc-ccC
Confidence 345544 45777864 234589999999988543222 2222356677665 999999999 544565432110 112
Q ss_pred CCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhC--CCceeEEEEeCCccchhhhhcCCCCCcch
Q 003886 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWC 721 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~--p~~~~a~v~~~pv~~~~~~~~~~~~~~~~ 721 (789)
.+...+.|+.++++|+.++. ..|++||+|+|+|+||++++.++... +++|+++|+.+|..++........ ....
T Consensus 154 ~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~-~~~~ 232 (489)
T 1qe3_A 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAAS-TAAA 232 (489)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHH-HHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHH-HHHH
Confidence 33445889999999998862 36999999999999999999887753 478999999999764321110000 0001
Q ss_pred hhhhccCc--cccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCC
Q 003886 722 YVESYGSK--GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 722 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~ 786 (789)
+...++.. .++++...+..+. +...+++.+......|.+++++..|..+.+++..+++++.+
T Consensus 233 ~~~~~g~~~~~~~~Lr~~~~~~l---~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~ 296 (489)
T 1qe3_A 233 FLQVLGINESQLDRLHTVAAEDL---LKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGA 296 (489)
T ss_dssp HHHHHTCCTTCGGGGGTSCHHHH---HHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTT
T ss_pred HHHHcCCCHHHHHHHHcCCHHHH---HHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCC
Confidence 11222221 2333333332221 11222222222334456778888888888888888887654
No 265
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.33 E-value=1.8e-11 Score=133.37 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=88.2
Q ss_pred eeecCCCee--EEEEEEecCCCCCCCCCcEEEEEcCCCCCC--Cchh----------------hH-HHHHHH-HHCCcEE
Q 003886 567 NLTKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV--SLSS----------------YS-KSLAFL-SSVGYSL 624 (789)
Q Consensus 567 ~~~~~~g~~--l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~--~~~~----------------~~-~~~~~l-a~~Gy~V 624 (789)
..++.+|.+ ..+.++.|.+. ..+.|+|.+.||..+.. ...+ +. ..+..+ +++||+|
T Consensus 81 ~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~V 158 (462)
T 3guu_A 81 RTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYV 158 (462)
T ss_dssp EEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEE
T ss_pred EEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEE
Confidence 345566754 78899999853 23589999999954421 1111 11 234566 8999999
Q ss_pred EEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCC-CCccEEEEEcCccHHHHHHHHHhC----CC-ceeE
Q 003886 625 LIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA-NPSKVTVVGGSHGGFLTTHLIGQA----PD-KFVA 698 (789)
Q Consensus 625 ~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-d~~rv~l~G~S~GG~~a~~~~~~~----p~-~~~a 698 (789)
+++||+|. |..+.. +..+..++.+.++.+.+...+ ...+++++|||+||..+++++... |+ .+++
T Consensus 159 v~~Dy~G~---G~~y~~------~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g 229 (462)
T 3guu_A 159 VSSDHEGF---KAAFIA------GYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVG 229 (462)
T ss_dssp EEECTTTT---TTCTTC------HHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEecCCCC---CCcccC------CcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEE
Confidence 99999984 332211 112223445555554443223 358999999999999999987753 33 6899
Q ss_pred EEEeCCccchhhh
Q 003886 699 AAARNPLCNLALM 711 (789)
Q Consensus 699 ~v~~~pv~~~~~~ 711 (789)
+++.++..|+...
T Consensus 230 ~~~~~~p~dl~~~ 242 (462)
T 3guu_A 230 ASHGGTPVSAKDT 242 (462)
T ss_dssp EEEESCCCBHHHH
T ss_pred EEEecCCCCHHHH
Confidence 9999998887443
No 266
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.32 E-value=3.8e-10 Score=121.28 Aligned_cols=250 Identities=11% Similarity=0.099 Sum_probs=144.0
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCC-CccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENE-NSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
++|||+.++... ....+.++++.+... ....+.... ..+...+|+|||+.|+.....+ .+
T Consensus 16 ~s~~~~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~~~~~dg-----~i 76 (372)
T 1k8k_C 16 WNKDRTQIAICP---------NNHEVHIYEKSGNKWVQVHELKEHN-----GQVTGVDWAPDSNRIVTCGTDR-----NA 76 (372)
T ss_dssp ECTTSSEEEEEC---------SSSEEEEEEEETTEEEEEEEEECCS-----SCEEEEEEETTTTEEEEEETTS-----CE
T ss_pred ECCCCCEEEEEe---------CCCEEEEEeCCCCcEEeeeeecCCC-----CcccEEEEeCCCCEEEEEcCCC-----eE
Confidence 468999887642 234566666633210 222333232 4588899999999999876543 24
Q ss_pred EEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 183 ELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 183 ~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
.+| ..++........ ...+.+ ..+.|+|||+.|+....+
T Consensus 77 ~vwd~~~~~~~~~~~~~-~~~~~v------~~~~~~~~~~~l~~~~~d-------------------------------- 117 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVIL-RINRAA------RCVRWAPNEKKFAVGSGS-------------------------------- 117 (372)
T ss_dssp EEEEEETTEEEEEEECC-CCSSCE------EEEEECTTSSEEEEEETT--------------------------------
T ss_pred EEEECCCCeeeeeEEee-cCCCce------eEEEECCCCCEEEEEeCC--------------------------------
Confidence 445 344433333321 112222 789999999998886433
Q ss_pred CCcccccCCccCceEEEEEccCCc----eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcc
Q 003886 261 EDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA 336 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~----~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~ 336 (789)
..|.+||+.+++ ...+. ......+..+.|+||++. |+..+. ...
T Consensus 118 ------------~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~~---------------dg~ 165 (372)
T 1k8k_C 118 ------------RVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVL----LAAGSC---------------DFK 165 (372)
T ss_dssp ------------SSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSE----EEEEET---------------TSC
T ss_pred ------------CEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCE----EEEEcC---------------CCC
Confidence 457888888776 23331 223456789999999987 666552 235
Q ss_pred eEEEecccccchh-hhhhhhcC-CCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 337 LYAVRVSLYKSEA-SELELKES-SSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 337 l~~~d~~~~~~~~-~~~~~~~~-~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
|+++|+....... ........ .........+..+...+....|+|||+.|+..+.+. .|.+||+.++
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~ 234 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-----------TVCLADADKK 234 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT-----------EEEEEEGGGT
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC-----------EEEEEECCCC
Confidence 7777752100000 00000000 001233445556666788999999999888777543 5999998765
Q ss_pred CCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEEC
Q 003886 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 475 (789)
Q Consensus 415 ~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl 475 (789)
......... ...+..+.|+|||+.| +.+ .++...+|.++.
T Consensus 235 ~~~~~~~~~-------------------~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 235 MAVATLASE-------------------TLPLLAVTFITESSLV-AAG-HDCFPVLFTYDS 274 (372)
T ss_dssp TEEEEEECS-------------------SCCEEEEEEEETTEEE-EEE-TTSSCEEEEEET
T ss_pred ceeEEEccC-------------------CCCeEEEEEecCCCEE-EEE-eCCeEEEEEccC
Confidence 432110000 0123467899999744 444 566777777664
No 267
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.32 E-value=8.3e-11 Score=148.04 Aligned_cols=236 Identities=12% Similarity=0.041 Sum_probs=153.2
Q ss_pred cccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEec
Q 003886 209 WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 288 (789)
Q Consensus 209 ~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l 288 (789)
....+.|||||+.|+....+.... .|+............+........|+++.....++..+..|.+||+.+++...+
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~--i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIK--IIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCE--EEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC
T ss_pred cEEEEEEcCCCCEEEEEcCCCCEE--EEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 346889999999999887665322 233322222223334455556677888866666666788999999999987766
Q ss_pred cCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecC
Q 003886 289 KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT 368 (789)
Q Consensus 289 ~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt 368 (789)
......+..+.|+||++ ++..+ ....|+++|+. .+.....+.
T Consensus 1041 --~~~~~~v~~~~~~~~~~-----l~~~~---------------~dg~v~vwd~~----------------~~~~~~~~~ 1082 (1249)
T 3sfz_A 1041 --QAHQETVKDFRLLQDSR-----LLSWS---------------FDGTVKVWNVI----------------TGRIERDFT 1082 (1249)
T ss_dssp --BCCSSCEEEEEECSSSE-----EEEEE---------------SSSEEEEEETT----------------TTCCCEEEE
T ss_pred --ecCCCcEEEEEEcCCCc-----EEEEE---------------CCCcEEEEECC----------------CCceeEEEc
Confidence 34455678899999876 44444 12368888882 333455677
Q ss_pred CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCC
Q 003886 369 ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 448 (789)
Q Consensus 369 ~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~ 448 (789)
.+.+.+...+|||||+.|+..+.+. .+.+||+.++.......+.. ..+..
T Consensus 1083 ~~~~~v~~~~~s~d~~~l~s~s~d~-----------~v~iwd~~~~~~~~~l~~h~-------------------~~v~~ 1132 (1249)
T 3sfz_A 1083 CHQGTVLSCAISSDATKFSSTSADK-----------TAKIWSFDLLSPLHELKGHN-------------------GCVRC 1132 (1249)
T ss_dssp CCSSCCCCEEECSSSSSCEEECCSS-----------CCCEECSSSSSCSBCCCCCS-------------------SCEEE
T ss_pred ccCCcEEEEEECCCCCEEEEEcCCC-----------cEEEEECCCcceeeeeccCC-------------------CcEEE
Confidence 7777889999999999998777543 48889987765432211110 12346
Q ss_pred CccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec----------CCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEE
Q 003886 449 NPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT----------PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYG 518 (789)
Q Consensus 449 ~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt----------~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~ 518 (789)
+.|+|||+.| +++..++...+ +|+.+|+..... ...+.+....|++||..++... ..+.+.
T Consensus 1133 ~~~s~dg~~l-at~~~dg~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~------g~v~vw 1203 (1249)
T 3sfz_A 1133 SAFSLDGILL-ATGDDNGEIRI--WNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG------GYLKWW 1203 (1249)
T ss_dssp EEECSSSSEE-EEEETTSCCCE--EESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES------SSEEEB
T ss_pred EEECCCCCEE-EEEeCCCEEEE--EECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC------CeEEEE
Confidence 6899999865 45555555444 477777654322 1222345568999999886542 357777
Q ss_pred eeccc
Q 003886 519 YFVDK 523 (789)
Q Consensus 519 ~~~~~ 523 (789)
++.++
T Consensus 1204 d~~~g 1208 (1249)
T 3sfz_A 1204 NVATG 1208 (1249)
T ss_dssp CSSSC
T ss_pred ECCCC
Confidence 76544
No 268
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.32 E-value=1.1e-10 Score=128.21 Aligned_cols=266 Identities=12% Similarity=0.071 Sum_probs=165.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||+|+.|+..+..+ .+.+| ..++..+.+.. ..+.| ..++|+|||+.|+..+.+...
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~---h~~~V------~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDA-----TIKVWDYETGDFERTLKG---HTDSV------QDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSS-----CEEEEETTTCCCCEEECC---CSSCE------EEEEECTTSSEEEEEETTSCC
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEec---cCCcE------EEEEEcCCCCEEEEEeCCCeE
Confidence 4588899999999998876654 45667 34444444332 22233 789999999999988877654
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (789)
. .|+............+........|.++....+++..+..|.+||+.+++..... ......+..+.|+|||+.
T Consensus 175 ~--iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~g~~--- 248 (410)
T 1vyh_C 175 K--LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTL--- 248 (410)
T ss_dssp C--EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSE---
T ss_pred E--EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-eCCCccEEEEEECCCCCE---
Confidence 3 4443222222233334444445678887655666777899999999988754331 223345678899999986
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCCCCccCcceecCC--------
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD-------- 382 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpD-------- 382 (789)
|+..+ .+..|.++|+ .++. ...+..+...+....|+|+
T Consensus 249 -l~s~s---------------~D~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 249 -IASCS---------------NDQTVRVWVV-----------------ATKECKAELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred -EEEEc---------------CCCeEEEEEC-----------------CCCceeeEecCCCceEEEEEEcCcccccchhh
Confidence 66555 2236778887 3333 3456666667788889987
Q ss_pred ------------CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCc
Q 003886 383 ------------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 450 (789)
Q Consensus 383 ------------G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ 450 (789)
|+.|+..+.+ ..|.+||+.++.......+. ...+..+.
T Consensus 296 ~~~~~~~~~~~~g~~l~sgs~D-----------~~i~iwd~~~~~~~~~~~~h-------------------~~~v~~v~ 345 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLSGSRD-----------KTIKMWDVSTGMCLMTLVGH-------------------DNWVRGVL 345 (410)
T ss_dssp CCSCC-------CCEEEEEETT-----------SEEEEEETTTTEEEEEEECC-------------------SSCEEEEE
T ss_pred hccccccccCCCCCEEEEEeCC-----------CeEEEEECCCCceEEEEECC-------------------CCcEEEEE
Confidence 5566655543 35999998775432110000 01234668
Q ss_pred cccCCCEEEEEEEeCCeEEEEEEECCCCcE-EEecCCCCCceeEEeeecCCEEEEE
Q 003886 451 WLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAV 505 (789)
Q Consensus 451 ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~-~~lt~~~~~~~~~~~s~dg~~l~~~ 505 (789)
|+|+|+.| +++..++...+| |+.+++. ..+......+....|++++..|+..
T Consensus 346 ~~~~g~~l-~s~s~D~~i~vw--d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 346 FHSGGKFI-LSCADDKTLRVW--DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398 (410)
T ss_dssp ECSSSSCE-EEEETTTEEEEE--CCTTSCCCEEEECCSSCEEEEEECSSSSCEEEE
T ss_pred EcCCCCEE-EEEeCCCeEEEE--ECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEE
Confidence 99999865 566666655555 6666654 3343333344555777877765543
No 269
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.31 E-value=1.2e-10 Score=123.94 Aligned_cols=260 Identities=9% Similarity=0.059 Sum_probs=143.5
Q ss_pred EEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCC--CccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 159 VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 159 ~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~--~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
++++++++.++.....+ +++.++ .+++..+.+.... .. ..+.|||||+.+++...
T Consensus 5 ~~~~~~~~~~v~~~~~~----~v~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~~~v~~~-------- 62 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPN----NLHVVDVASDTVYKSCVMPDKFGP----------GTAMMAPDNRTAYVLNN-------- 62 (349)
T ss_dssp CCCCTTCEEEEEEETTT----EEEEEETTTTEEEEEEECSSCCSS----------CEEEECTTSSEEEEEET--------
T ss_pred ccccCCCEEEEEeCCCC----eEEEEECCCCcEEEEEecCCCCCC----------ceeEECCCCCEEEEEeC--------
Confidence 46788877665544332 566666 5666666665543 33 68999999987766532
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCC-----CCccceEEEeeCCCCCc
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~-----~~~~~~~~wSPDg~~~~ 310 (789)
....|++||+.+++......... ...+..++|+|||+.
T Consensus 63 -----------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-- 105 (349)
T 1jmx_B 63 -----------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE-- 105 (349)
T ss_dssp -----------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE--
T ss_pred -----------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCE--
Confidence 23679999999887654311111 123578899999998
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCee---ecCCCCCccCcceecCCCCEEE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV---NLTESISSAFFPRFSPDGKFLV 387 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~Lt~~~~~~~~p~~SpDG~~la 387 (789)
|++......... ..+ ......|+++|+ .+++.. ............+|||||+ |+
T Consensus 106 --l~~~~~~~~~~~--~~~-~~~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 106 --VYATVNPTQRLN--DHY-VVKPPRLEVFST-----------------ADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp --EEEEEEEEEECS--SCE-EECCCEEEEEEG-----------------GGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred --EEEEcccccccc--ccc-ccCCCeEEEEEC-----------------CCccccceeeeccCCCcccceeECCCCc-EE
Confidence 777653210000 000 011347999998 332211 1111222456677999999 54
Q ss_pred EEecCCCCCCCCccccceeEEeecCCCCCCCc-cccee------------------------eEEeeeeccCCC------
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-LEKIV------------------------DVIPVVQCAEGD------ 436 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~-t~~~~------------------------~v~~~~~~~~~~------ 436 (789)
. ... .|+++|..+++.... ..... ....+...+...
T Consensus 163 ~-~~~------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 163 V-AGP------------DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp E-ESS------------SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred E-ccC------------cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 4 311 288888877654211 10100 000000000000
Q ss_pred -CCccc-----------------cccCCCCCcccc-CCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeee
Q 003886 437 -CFPGL-----------------YSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL 497 (789)
Q Consensus 437 -~f~g~-----------------~~~~~~~~~ws~-Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~ 497 (789)
...++ .........|+| ||+.+++. ...|+.+|+.+++...............+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 304 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKAANLDHTYYCVAFDK 304 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECS
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEEEcCCCCccceEECC
Confidence 00000 000123456789 99988766 4478999999998765543333334568899
Q ss_pred cCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 498 DGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 498 dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
+|+.|+.. ... ..+.+++..+
T Consensus 305 dg~~l~~~-~~~---~~v~v~d~~~ 325 (349)
T 1jmx_B 305 KGDKLYLG-GTF---NDLAVFNPDT 325 (349)
T ss_dssp SSSCEEEE-SBS---SEEEEEETTT
T ss_pred CCCEEEEe-cCC---CeEEEEeccc
Confidence 99988763 221 5677877654
No 270
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.31 E-value=2e-12 Score=140.87 Aligned_cols=179 Identities=12% Similarity=0.086 Sum_probs=115.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcE----EEEEcCCCCCCCCchhhccCCCCC
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS----LLIVNYRGSLGFGEEALQSLPGKV 647 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~----V~~~d~rGs~G~G~~~~~~~~~~~ 647 (789)
.|.....++|.|.++. .+++|+|+++||+.+... ..+...++.|+++|+. |+++|++|+.++..++ .
T Consensus 178 ~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~-~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~----~--- 248 (403)
T 3c8d_A 178 LKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQS-MPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHEL----P--- 248 (403)
T ss_dssp TTEEEEEEEEEC------CCCCEEEESSHHHHHHT-SCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHS----S---
T ss_pred cCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhc-CcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccC----C---
Confidence 5677889999998653 578999999999543111 1233456788888875 9999997622111111 1
Q ss_pred CcccHHHH--HHHHHHHHHcC--CCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccchhhhhcCCCCCcchhh
Q 003886 648 GSQDVNDV--LTAIDHVIDMG--LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 723 (789)
Q Consensus 648 ~~~~~~D~--~~~i~~l~~~~--~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~ 723 (789)
......+. .+++.++.++. ..|+++++|+|+|+||++++.++.++|++|+++++.+|...+.... +
T Consensus 249 ~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~---~------- 318 (403)
T 3c8d_A 249 CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG---G------- 318 (403)
T ss_dssp SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT---S-------
T ss_pred ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC---C-------
Confidence 11223332 24666766642 2588999999999999999999999999999999999986432110 0
Q ss_pred hhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 724 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
. +.....+.+.. . .......|++|+||+.|..+ ..++.+++++|+.
T Consensus 319 ----~---------~~~~~~~~~~~-~---~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~ 364 (403)
T 3c8d_A 319 ----Q---------QEGVLLEKLKA-G---EVSAEGLRIVLEAGIREPMI-MRANQALYAQLHP 364 (403)
T ss_dssp ----S---------SCCHHHHHHHT-T---SSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGG
T ss_pred ----C---------cHHHHHHHHHh-c---cccCCCceEEEEeeCCCchh-HHHHHHHHHHHHh
Confidence 0 00011111211 1 12455678999999998654 6889999999874
No 271
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.31 E-value=4.7e-13 Score=148.13 Aligned_cols=183 Identities=15% Similarity=0.232 Sum_probs=120.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
..+...+|||||++||..+..+ ...+|+... .+.... .+..+ ....+..++|||||+.||..+.+....
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-----~V~iwd~~~--~l~~l~--~~~~~-~~~sv~svafSPDG~~LAsgs~DGtVk- 154 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-----NVSVFKDNK--MLTNLD--SKGNL-SSRTYHCFEWNPIESSIVVGNEDGELQ- 154 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-----CEEEEETTE--EEEECC--CSSCS-TTTCEEEEEECSSSSCEEEEETTSEEE-
T ss_pred CcEEEEEECCCCCEEEEEeCCC-----cEEEEeCCc--eeeecc--CCCcc-ccccEEEEEEcCCCCEEEEEcCCCEEE-
Confidence 4588999999999999887764 456674322 222222 11110 111237899999999999998876543
Q ss_pred CCccCCCCCCC-------CCC----cCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceE----eccCCCCCCccc
Q 003886 234 PTFSLGSTKGG-------SSD----KDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ----AVKGIPKSLSVG 298 (789)
Q Consensus 234 ~~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~----~l~~~~~~~~~~ 298 (789)
.|+...+... ... .++..|+....|+||. ..+...+..+++||+.+++.. .+. ......+.
T Consensus 155 -IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~-~~h~~~V~ 230 (588)
T 2j04_A 155 -FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ-NASRRKIT 230 (588)
T ss_dssp -EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-CCCSSCCC
T ss_pred -EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-ccccCcEE
Confidence 4443332210 111 3456788889999995 677777899999999988742 242 12335788
Q ss_pred eEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec-CCCCCccCcc
Q 003886 299 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFP 377 (789)
Q Consensus 299 ~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L-t~~~~~~~~p 377 (789)
.++|+ |+. |+.++. ..|.++|+ .++....+ ..+...+...
T Consensus 231 svaFs--g~~----LASa~~----------------~tIkLWd~-----------------~~~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 231 DLKIV--DYK----VVLTCP----------------GYVHKIDL-----------------KNYSISSLKTGSLENFHII 271 (588)
T ss_dssp CEEEE--TTE----EEEECS----------------SEEEEEET-----------------TTTEEEEEECSCCSCCCEE
T ss_pred EEEEE--CCE----EEEEeC----------------CeEEEEEC-----------------CCCeEEEEEcCCCceEEEE
Confidence 99999 555 665541 26888887 55666333 3666778889
Q ss_pred ee--cCCCCEEEEEe
Q 003886 378 RF--SPDGKFLVFLS 390 (789)
Q Consensus 378 ~~--SpDG~~la~~s 390 (789)
.| ||||+.|+...
T Consensus 272 a~~~s~d~~~La~a~ 286 (588)
T 2j04_A 272 PLNHEKESTILLMSN 286 (588)
T ss_dssp EETTCSSCEEEEECS
T ss_pred EeeeCCCCCEEEEEc
Confidence 99 99998776544
No 272
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.31 E-value=1.4e-10 Score=121.86 Aligned_cols=274 Identities=13% Similarity=0.055 Sum_probs=155.9
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
.++|||++++... ..+.+.++++.. +.....+.... ..+...+|||||++|+.....+ .+
T Consensus 30 ~~s~~~~~l~s~~---------~dg~i~iw~~~~-~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~~d~-----~i 89 (312)
T 4ery_A 30 KFSPNGEWLASSS---------ADKLIKIWGAYD-GKFEKTISGHK-----LGISDVAWSSDSNLLVSASDDK-----TL 89 (312)
T ss_dssp EECTTSSEEEEEE---------TTSCEEEEETTT-CCEEEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----EE
T ss_pred EECCCCCEEEEee---------CCCeEEEEeCCC-cccchhhccCC-----CceEEEEEcCCCCEEEEECCCC-----EE
Confidence 3578998776542 223455555422 22122232222 4578899999999999876654 56
Q ss_pred EEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 183 ELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 183 ~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
.+|+ .++....+.. ..+.+ ..+.|+||++.|+..+.+.... .|+............+........|.
T Consensus 90 ~vwd~~~~~~~~~~~~---~~~~v------~~~~~~~~~~~l~s~~~d~~i~--iwd~~~~~~~~~~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKG---HSNYV------FCCNFNPQSNLIVSGSFDESVR--IWDVKTGKCLKTLPAHSDPVSAVHFN 158 (312)
T ss_dssp EEEETTTCCEEEEEEC---CSSCE------EEEEECSSSSEEEEEETTSCEE--EEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEECCCCcEEEEEcC---CCCCE------EEEEEcCCCCEEEEEeCCCcEE--EEECCCCEEEEEecCCCCcEEEEEEc
Confidence 6773 3443333332 11222 6889999999998887665432 34332222222222233333445677
Q ss_pred CCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEE
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (789)
++....+++..+..|.+||+.+++............+..++|+|||+. |+..+ ....|.++
T Consensus 159 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iw 219 (312)
T 4ery_A 159 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY----ILAAT---------------LDNTLKLW 219 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE----EEEEE---------------TTTEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE----EEEEc---------------CCCeEEEE
Confidence 775555566677899999999887543310222335677899999997 77655 22368888
Q ss_pred ecccccchhhhhhhhcCCCCCCC-eeecCCCCC--ccCcceec-CCCCEEEEEecCCCCCCCCccccceeEEeecCCCCC
Q 003886 341 RVSLYKSEASELELKESSSEDLP-VVNLTESIS--SAFFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~--~~~~p~~S-pDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
|+ .+++ ...+..+.. ......++ ++|+.|+..+.+ ..|++||+.+++.
T Consensus 220 d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----------g~i~vwd~~~~~~ 271 (312)
T 4ery_A 220 DY-----------------SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-----------NLVYIWNLQTKEI 271 (312)
T ss_dssp ET-----------------TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-----------SCEEEEETTTCCE
T ss_pred EC-----------------CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-----------CEEEEEECCCchh
Confidence 87 3333 334443322 22334455 567766654433 3599999877543
Q ss_pred CCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEE-eCCeEEEEEE
Q 003886 417 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISV 473 (789)
Q Consensus 417 ~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~-~~~~~~l~~~ 473 (789)
.....+.. ..+..+.|+|+++.++..+. .++...+|..
T Consensus 272 ~~~~~~h~-------------------~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 272 VQKLQGHT-------------------DVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp EEEECCCS-------------------SCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred hhhhhccC-------------------CcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 21111110 12345689999986644332 3566677754
No 273
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.30 E-value=4.8e-11 Score=131.01 Aligned_cols=274 Identities=11% Similarity=0.052 Sum_probs=164.3
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (789)
++|||+.++-. ...+.+.++++.+. .....+.... ..+...+|+|+|+.|+..+... .+.
T Consensus 116 ~~p~~~~l~s~---------s~Dg~i~vwd~~~~-~~~~~l~~h~-----~~V~~v~~~~~~~~l~sgs~D~-----~i~ 175 (410)
T 1vyh_C 116 FHPVFSVMVSA---------SEDATIKVWDYETG-DFERTLKGHT-----DSVQDISFDHSGKLLASCSADM-----TIK 175 (410)
T ss_dssp ECSSSSEEEEE---------ESSSCEEEEETTTC-CCCEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----CCC
T ss_pred EcCCCCEEEEE---------eCCCeEEEEECCCC-cEEEEEeccC-----CcEEEEEEcCCCCEEEEEeCCC-----eEE
Confidence 45676655432 23456677776332 2222333222 4588899999999998776543 345
Q ss_pred Eec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeC
Q 003886 184 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 261 (789)
Q Consensus 184 i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (789)
+|+ +++..+ .+ .+..+.| ..+.|+|||+.|+..+.+.... .|+............+..+.....+.+
T Consensus 176 iwd~~~~~~~~--~~-~~h~~~V------~~v~~~p~~~~l~s~s~D~~i~--~wd~~~~~~~~~~~~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 176 LWDFQGFECIR--TM-HGHDHNV------SSVSIMPNGDHIVSASRDKTIK--MWEVQTGYCVKTFTGHREWVRMVRPNQ 244 (410)
T ss_dssp EEETTSSCEEE--CC-CCCSSCE------EEEEECSSSSEEEEEETTSEEE--EEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EEeCCCCceeE--EE-cCCCCCE------EEEEEeCCCCEEEEEeCCCeEE--EEECCCCcEEEEEeCCCccEEEEEECC
Confidence 553 233222 22 1222223 7899999999998887665432 344322222223334555555566777
Q ss_pred CcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCC----------------ccEEEEEeecCCceee
Q 003886 262 DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGL----------------HQYLVFVGWSSETRKL 325 (789)
Q Consensus 262 d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~----------------~~~l~f~~~~~~~~~~ 325 (789)
+.....++..+..|.+||+.+++..... ......+..+.|+|++... +..|+..+
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs-------- 315 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVATKECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS-------- 315 (410)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--------
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe--------
Confidence 7544556667789999999988765431 2334467788999974210 00033333
Q ss_pred eeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccc
Q 003886 326 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 404 (789)
Q Consensus 326 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~ 404 (789)
.+..|.++|+ .++ ....+..+...+....|+|+|++|+..+.+.
T Consensus 316 -------~D~~i~iwd~-----------------~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~----------- 360 (410)
T 1vyh_C 316 -------RDKTIKMWDV-----------------STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK----------- 360 (410)
T ss_dssp -------TTSEEEEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTT-----------
T ss_pred -------CCCeEEEEEC-----------------CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCC-----------
Confidence 3346888898 333 4456666777788899999999988766442
Q ss_pred eeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003886 405 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (789)
Q Consensus 405 ~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (789)
.|.+||+.++......... ...+..+.|+|++..| +++..++...+|.
T Consensus 361 ~i~vwd~~~~~~~~~~~~h-------------------~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 361 TLRVWDYKNKRCMKTLNAH-------------------EHFVTSLDFHKTAPYV-VTGSVDQTVKVWE 408 (410)
T ss_dssp EEEEECCTTSCCCEEEECC-------------------SSCEEEEEECSSSSCE-EEEETTSEEEEEC
T ss_pred eEEEEECCCCceEEEEcCC-------------------CCcEEEEEEcCCCCEE-EEEeCCCcEEEEe
Confidence 5999998765432111110 1124467899999854 6777778777774
No 274
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.2e-10 Score=127.46 Aligned_cols=290 Identities=14% Similarity=0.115 Sum_probs=168.2
Q ss_pred cccEEEEeCCCCC-eEEEEecCCCCCCeEEEEe---cCCc------eeEEEecCCCcccccc-CCCcccceeecCCCCEE
Q 003886 154 TGASAVVPSPSGS-KLLVVRNPENESPIQFELW---SQSQ------LEKEFHVPQTVHGSVY-ADGWFEGISWNSDETLI 222 (789)
Q Consensus 154 ~~~~~~~~SPdG~-~la~~~~~~~~~~~~~~i~---~~~~------~~~~~~~~~~~~g~v~-~d~~~~~~~wSpDg~~l 222 (789)
+.+...+|||||+ +||.....+ .-.+|.+. ..++ ....+..+...|...- ..+.+..+.|||||+.|
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNS--VARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBT--EEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred CceEEEEECCCCCcEEEEecCCc--eEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 3578899999999 888776542 23344441 1222 1222222111110000 01123799999999999
Q ss_pred EEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCc------
Q 003886 223 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLS------ 296 (789)
Q Consensus 223 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~------ 296 (789)
+....+.... .|+ ...........+........|.++....++...+..|.+||+.+++..... ......
T Consensus 124 ~~~~~dg~i~--i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~ 199 (425)
T 1r5m_A 124 VTGVENGELR--LWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF-ELKETGGSSINA 199 (425)
T ss_dssp EEEETTSCEE--EEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE-CCC---------
T ss_pred EEEeCCCeEE--EEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe-eccccCccceee
Confidence 9887665322 233 111111222233444445678887655666667789999999988765432 111111
Q ss_pred ---------cceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec
Q 003886 297 ---------VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL 367 (789)
Q Consensus 297 ---------~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L 367 (789)
+..+.|+|++. ++..+ ....|+++|+. .......+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~-----~~~~~---------------~~g~i~~~d~~----------------~~~~~~~~ 243 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDK-----FVIPG---------------PKGAIFVYQIT----------------EKTPTGKL 243 (425)
T ss_dssp ------CCCBSCCEEEETTE-----EEEEC---------------GGGCEEEEETT----------------CSSCSEEE
T ss_pred ccccCCcceeeEEEEcCCCE-----EEEEc---------------CCCeEEEEEcC----------------CCceeeee
Confidence 67889999854 44443 22368889982 22334456
Q ss_pred CCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCC
Q 003886 368 TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 447 (789)
Q Consensus 368 t~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~ 447 (789)
..+...+...+|+|||+.|+..+.+. .|++||+.++......... ...+.
T Consensus 244 ~~~~~~i~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~-------------------~~~i~ 293 (425)
T 1r5m_A 244 IGHHGPISVLEFNDTNKLLLSASDDG-----------TLRIWHGGNGNSQNCFYGH-------------------SQSIV 293 (425)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTS-----------CEEEECSSSBSCSEEECCC-------------------SSCEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCC-----------EEEEEECCCCccceEecCC-------------------CccEE
Confidence 56667788899999999888776443 5899998775432111100 01234
Q ss_pred CCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC-CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 448 SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 448 ~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~-~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
.+.|+||+ +++++..++ .|..+|+.+++....... ...+....++++++.|+....+ ..+.+.++...
T Consensus 294 ~~~~~~~~--~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~~~~~~ 362 (425)
T 1r5m_A 294 SASWVGDD--KVISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD----GQVNVYDLKKL 362 (425)
T ss_dssp EEEEETTT--EEEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT----SCEEEEECHHH
T ss_pred EEEECCCC--EEEEEeCCC--cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC----CeEEEEECCCC
Confidence 67899999 445555555 455668878876655443 3345556788988877655433 23777776543
No 275
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.29 E-value=3.4e-12 Score=132.00 Aligned_cols=183 Identities=14% Similarity=0.095 Sum_probs=108.3
Q ss_pred eecCC-CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHH-CCcEEEEEcCCCCCCC-----Cchhh
Q 003886 568 LTKGA-QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGF-----GEEAL 640 (789)
Q Consensus 568 ~~~~~-g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~-----G~~~~ 640 (789)
+.+.. |..+..++++|+++++.+++|+|+++||+... ........+.|++ .+..|+.+++++...+ +.++.
T Consensus 18 ~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~--~~~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~~d~~ 95 (278)
T 2gzs_A 18 FDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVM--DRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYT 95 (278)
T ss_dssp EECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHH--HHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTC
T ss_pred EEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHH--HHHHHHHHHHhccCCCeEEEEEcCCCCCcCcccccccccC
Confidence 34443 67899999999988777889998777774321 1111123345554 6788888998753211 11121
Q ss_pred ccC--------C----CCCCcccHHHHHHH-----HHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeC
Q 003886 641 QSL--------P----GKVGSQDVNDVLTA-----IDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN 703 (789)
Q Consensus 641 ~~~--------~----~~~~~~~~~D~~~~-----i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 703 (789)
... . ...+ ...+..+. +.++.++..+|++|++|+|+|+||+++++++.+ |++|+++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s 172 (278)
T 2gzs_A 96 PAAESRKTDLHSGRFSRKSG--GSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSAS 172 (278)
T ss_dssp CGGGGTTCSCC-----CCCC--CHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEES
T ss_pred CCCccccccccccCcCCCcC--CHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEeC
Confidence 110 0 0011 12222222 233334444788899999999999999999999 99999999999
Q ss_pred CccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCCCC--------Ch
Q 003886 704 PLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRV--------PV 775 (789)
Q Consensus 704 pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v--------p~ 775 (789)
|...+... ..........+ . ..-..|++|.||+.|..+ +.
T Consensus 173 ~~~~~~~~-----------------------------~~~~~~~~~~~--~-~~~~~~i~l~~G~~d~~~~~~~~~~~~~ 220 (278)
T 2gzs_A 173 PSLGRGYD-----------------------------ALLSRVTAVEP--L-QFCTKHLAIMEGSATQGDNRETHAVGVL 220 (278)
T ss_dssp GGGSTTHH-----------------------------HHHHHHHTSCT--T-TTTTCEEEEEECCC-----------CHH
T ss_pred cchhcCcc-----------------------------hHHHHHHHhhc--c-CCCCCcEEEEecCccccccccchhhhhH
Confidence 87532110 00000011110 0 112458999999999875 47
Q ss_pred HHHHHHHHHCCC
Q 003886 776 SNGLQVIYHIPF 787 (789)
Q Consensus 776 ~~~~~l~~~l~~ 787 (789)
.++.+++++|++
T Consensus 221 ~~~~~~~~~L~~ 232 (278)
T 2gzs_A 221 SKIHTTLTILKD 232 (278)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 899999988864
No 276
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.29 E-value=7e-11 Score=141.64 Aligned_cols=264 Identities=10% Similarity=0.047 Sum_probs=163.3
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
+.+...+|||||++||+....+ ...+| ..++..+.+.. ..+.| ..+.|||||++|+..+.+...
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g-----~v~iwd~~~~~~~~~~~~---~~~~v------~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVEIWNYETQVEVRSIQV---TETPV------RAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEEC---CSSCE------EEEEEEGGGTEEEEEETTSEE
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEECCCCceEEEEec---CCCcE------EEEEEeCCCCEEEEEeCCCeE
Confidence 4588999999999999987543 46677 34444444332 12223 789999999999998775432
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCC-ceEeccCCCCCCccceEEEee-CCCCC
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAP-LNEGL 309 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g-~~~~l~~~~~~~~~~~~~wSP-Dg~~~ 309 (789)
. .|+...+........+........|.++....+++..+..|.+||+.++ ...... ......+..++|+| |++.
T Consensus 80 ~--vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~- 155 (814)
T 3mkq_A 80 R--VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPST- 155 (814)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE-ECCSSCEEEEEEETTEEEE-
T ss_pred E--EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE-cCCCCcEEEEEEEcCCCCE-
Confidence 2 3433222222223334445556678888655666667789999999887 333321 23344678899999 7776
Q ss_pred ccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCC-CCccCcceecC--CCCEE
Q 003886 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES-ISSAFFPRFSP--DGKFL 386 (789)
Q Consensus 310 ~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~-~~~~~~p~~Sp--DG~~l 386 (789)
|+..+ ....|+++|+. .......+..+ ...+....|+| ||+.|
T Consensus 156 ---l~~~~---------------~dg~v~vwd~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 156 ---FASGC---------------LDRTVKVWSLG----------------QSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp ---EEEEE---------------TTSEEEEEETT----------------CSSCSEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred ---EEEEe---------------CCCeEEEEECC----------------CCcceeEEecCCCCCEEEEEEEECCCCCEE
Confidence 66555 23368888872 22233333333 36688899999 99988
Q ss_pred EEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCC
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (789)
+..+.+ ..|.+||+.++..... ... ....+..+.|+|||+.| +++..++
T Consensus 202 ~~~~~d-----------g~i~~~d~~~~~~~~~----------~~~---------~~~~v~~~~~~~~~~~l-~~~~~dg 250 (814)
T 3mkq_A 202 ITASDD-----------LTIKIWDYQTKSCVAT----------LEG---------HMSNVSFAVFHPTLPII-ISGSEDG 250 (814)
T ss_dssp EEECTT-----------SEEEEEETTTTEEEEE----------EEC---------CSSCEEEEEECSSSSEE-EEEETTS
T ss_pred EEEeCC-----------CEEEEEECCCCcEEEE----------EcC---------CCCCEEEEEEcCCCCEE-EEEeCCC
Confidence 776644 2599999876443111 000 00124467899999955 4555555
Q ss_pred eEEEEEEECCCCcEEEecCCC-CCceeEEeeecCCEE
Q 003886 467 SQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNI 502 (789)
Q Consensus 467 ~~~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l 502 (789)
.. ..+|+.+++.......+ .......+++++..+
T Consensus 251 ~v--~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 251 TL--KIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp CE--EEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred eE--EEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 44 44577787765544333 344455678887754
No 277
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.29 E-value=5.5e-10 Score=117.95 Aligned_cols=242 Identities=12% Similarity=0.134 Sum_probs=141.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||||++|+..+... .+.+|+ .++..+.+. +..+.| ..+.|+|+++.|+..+.+...
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~-----~v~~wd~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~l~s~s~D~~i 131 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDK-----TLRLWDVATGETYQRFV---GHKSDV------MSVDIDKKASMIISGSRDKTI 131 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CCSSCE------EEEEECTTSCEEEEEETTSCE
T ss_pred ccEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCCeeEEEc---cCCCcE------EEEEEcCCCCEEEEEeCCCeE
Confidence 4578889999999999877654 567773 444433332 122223 789999999999988877644
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCc------ccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeC
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW------GETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 305 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~------g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPD 305 (789)
. .|+.. .........+..+.....|.+.. ...+++..+..|.+||+.+++..... ......+..++|+||
T Consensus 132 ~--vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 132 K--VWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF-IGHNSNINTLTASPD 207 (319)
T ss_dssp E--EEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE-CCCCSCEEEEEECTT
T ss_pred E--EEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee-cCCCCcEEEEEEcCC
Confidence 3 23321 11111112233333333444421 12344556788999999887755431 233446788999999
Q ss_pred CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCCCCccCcceecCCCC
Q 003886 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGK 384 (789)
Q Consensus 306 g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~ 384 (789)
|+. |+..+ .+..|.++|+ .+++ ...+. ....+...+|||||+
T Consensus 208 g~~----l~s~~---------------~dg~i~iwd~-----------------~~~~~~~~~~-~~~~v~~~~~sp~~~ 250 (319)
T 3frx_A 208 GTL----IASAG---------------KDGEIMLWNL-----------------AAKKAMYTLS-AQDEVFSLAFSPNRY 250 (319)
T ss_dssp SSE----EEEEE---------------TTCEEEEEET-----------------TTTEEEEEEE-CCSCEEEEEECSSSS
T ss_pred CCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEec-CCCcEEEEEEcCCCC
Confidence 997 77665 2336888887 3443 33443 334578899999999
Q ss_pred EEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe
Q 003886 385 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 464 (789)
Q Consensus 385 ~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~ 464 (789)
.|+..... .+.+|+++++... ....... ..+.......+..++|+|||+.| +++..
T Consensus 251 ~la~~~~~------------~i~v~~~~~~~~~----------~~~~~~~-~~~~~~~~~~v~~~~~spdg~~l-~sg~~ 306 (319)
T 3frx_A 251 WLAAATAT------------GIKVFSLDPQYLV----------DDLRPEF-AGYSKAAEPHAVSLAWSADGQTL-FAGYT 306 (319)
T ss_dssp EEEEEETT------------EEEEEEETTEEEE----------EEECCCC-TTCCGGGCCCEEEEEECTTSSEE-EEEET
T ss_pred EEEEEcCC------------CcEEEEeCcCeee----------eccCccc-cccccCcCcceeEEEECCCCCEE-EEeec
Confidence 88765532 2677776553211 0000000 00000011123467899999966 56667
Q ss_pred CCeEEEEEEE
Q 003886 465 GSSQVIISVN 474 (789)
Q Consensus 465 ~~~~~l~~~d 474 (789)
++...||.+.
T Consensus 307 Dg~i~vWd~~ 316 (319)
T 3frx_A 307 DNVIRVWQVM 316 (319)
T ss_dssp TSCEEEEEEE
T ss_pred CceEEEEEEe
Confidence 7777787665
No 278
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.28 E-value=3.2e-10 Score=121.11 Aligned_cols=249 Identities=12% Similarity=0.079 Sum_probs=138.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||+|+.|+..+..+ ...+|+ .++..+.+.. ..+.| ..+.|||||+.|+..+.+...
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~---h~~~v------~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDK-----TLRLWDLRTGTTYKRFVG---HQSEV------YSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTS-----EEEEEETTSSCEEEEEEC---CCSCE------EEEEECSSTTEEEEEETTSCE
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEEEcC---CCCcE------EEEEECCCCCEEEEEcCCCEE
Confidence 4578899999999998776554 567773 4444333321 12223 789999999999988766543
Q ss_pred CCCCccCCCCC--CCCCCcCCCCCCCcceeeCCcc----------cccCCccCceEEEEEccCCceEeccCCCCCCccce
Q 003886 232 SKPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDWG----------ETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQ 299 (789)
Q Consensus 232 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~g----------~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~ 299 (789)
. .|+..... .......+..+.....|.++.. ...++..+..|.+||........+ ......+..
T Consensus 143 ~--~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~--~~h~~~v~~ 218 (343)
T 2xzm_R 143 K--LWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTF--KAHESNVNH 218 (343)
T ss_dssp E--EEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEE--ECCSSCEEE
T ss_pred E--EEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEE--cCccccceE
Confidence 3 33321100 0011112333444445655531 223344567899999544333344 233446788
Q ss_pred EEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCccee
Q 003886 300 VVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 379 (789)
Q Consensus 300 ~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~ 379 (789)
++|+|||+. |+..+ .+..|.++|+. ..............+...+|
T Consensus 219 ~~~s~~g~~----l~sgs---------------~dg~v~iwd~~----------------~~~~~~~~~~~~~~v~~v~~ 263 (343)
T 2xzm_R 219 LSISPNGKY----IATGG---------------KDKKLLIWDIL----------------NLTYPQREFDAGSTINQIAF 263 (343)
T ss_dssp EEECTTSSE----EEEEE---------------TTCEEEEEESS----------------CCSSCSEEEECSSCEEEEEE
T ss_pred EEECCCCCE----EEEEc---------------CCCeEEEEECC----------------CCcccceeecCCCcEEEEEE
Confidence 999999997 77665 23367788862 11222111122334778999
Q ss_pred cCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEE
Q 003886 380 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 459 (789)
Q Consensus 380 SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~ 459 (789)
||||+.|+... +. .+.+||+.++....+..-... .+... ....+ ....+..++|+|||+.|
T Consensus 264 sp~~~~la~~~-d~-----------~v~iw~~~~~~~~~~~~~~~~--~~~~~---~~~~~-~~~~v~~~~~sp~g~~l- 324 (343)
T 2xzm_R 264 NPKLQWVAVGT-DQ-----------GVKIFNLMTQSKAPVCTIEAE--PITKA---EGQKG-KNPQCTSLAWNALGKKL- 324 (343)
T ss_dssp CSSSCEEEEEE-SS-----------CEEEEESSSCCSCSEEECCCC--SGGGB---TTBCC-SCCCEEEEEECSSSCCE-
T ss_pred CCCCCEEEEEC-CC-----------CEEEEEeCCCCCCceEEeecC--cchhh---hhhcC-CCCceEEEEECCCCCeE-
Confidence 99998776433 21 388899877544221000000 00000 00000 01123467899999865
Q ss_pred EEEEeCCeEEEEEEE
Q 003886 460 LSSIWGSSQVIISVN 474 (789)
Q Consensus 460 ~~~~~~~~~~l~~~d 474 (789)
+++..++...+|.++
T Consensus 325 ~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 325 FAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEETTSEEEEEEEE
T ss_pred EEecCCceEEEEEEE
Confidence 566677777777654
No 279
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.28 E-value=4.9e-11 Score=130.57 Aligned_cols=292 Identities=15% Similarity=0.147 Sum_probs=163.3
Q ss_pred ccEEEEeCCCCCeEEEEecCCC------CCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEe
Q 003886 155 GASAVVPSPSGSKLLVVRNPEN------ESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 226 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~------~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~ 226 (789)
.+...+|||||+.++++....+ .....+.+| ..++..+.... ....+ .+..+.|||||+.|+...
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~------~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDS------KFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSS------CEEEEEECSSSSCEEEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCC------ceEEEEECCCCCeEEEEc
Confidence 3667899999995555542211 111234455 22221111111 01112 237999999999999887
Q ss_pred ecCCCCCCCccCCC----CCCCCCCcCCCCCCCcceeeCCc-ccccCCccCceEEEEEccCCc------eEe-ccC-CCC
Q 003886 227 EEPSPSKPTFSLGS----TKGGSSDKDCNSWKGQGDWEEDW-GETYAGKRQPSLFVININSGE------VQA-VKG-IPK 293 (789)
Q Consensus 227 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~-g~~~~~~~~~~l~v~d~~~g~------~~~-l~~-~~~ 293 (789)
.+.... .|+... .........+........|.++. ...+++..+..|.+||+.+++ ... +.. ...
T Consensus 87 ~dg~v~--vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 87 DNGSLE--LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp SSSCEE--EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred cCCeEE--EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 765432 333222 11112233445555667788873 344455567889999998876 221 100 122
Q ss_pred CCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCC--
Q 003886 294 SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTES-- 370 (789)
Q Consensus 294 ~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~-- 370 (789)
...+..++|+||+.. +++++. ....|.++|+ .+++ ...+...
T Consensus 165 ~~~v~~~~~~~~~~~----~l~~~~--------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~ 209 (416)
T 2pm9_A 165 VDEVISLAWNQSLAH----VFASAG--------------SSNFASIWDL-----------------KAKKEVIHLSYTSP 209 (416)
T ss_dssp SCCCCEEEECSSCTT----EEEEES--------------SSSCEEEEET-----------------TTTEEEEEECCCCC
T ss_pred CCCeeEEEeCCCCCc----EEEEEc--------------CCCCEEEEEC-----------------CCCCcceEEecccc
Confidence 346779999999666 666652 2236888887 3333 3344433
Q ss_pred ----CCccCcceecCCCCE-EEEEecCCCCCCCCccccceeEEeecCCCCCC-Cccc-ceeeEEeeeeccCCCCCccccc
Q 003886 371 ----ISSAFFPRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLE-KIVDVIPVVQCAEGDCFPGLYS 443 (789)
Q Consensus 371 ----~~~~~~p~~SpDG~~-la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~-~~t~-~~~~v~~~~~~~~~~~f~g~~~ 443 (789)
...+...+|+|||+. |+..+.+. ....|++||+.++... .... .. .
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~--------~~~~i~~~d~~~~~~~~~~~~~~~-------------------~ 262 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSD--------NDPSILIWDLRNANTPLQTLNQGH-------------------Q 262 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCS--------SSCCCCEEETTSTTSCSBCCCSCC-------------------S
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCC--------CCceEEEEeCCCCCCCcEEeecCc-------------------c
Confidence 456788999999854 44444331 1126899998875321 1111 11 0
Q ss_pred cCCCCCcccc-CCCEEEEEEEeCCeEEEEEEECCCCcEEEecC-CCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 444 SSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 444 ~~~~~~~ws~-Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~-~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
..+..+.|+| |++. ++++..++. |..+|+.+++...... ....+....|++++..++++.+... .+.+.++.
T Consensus 263 ~~v~~~~~s~~~~~~-l~s~~~dg~--v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~---~i~iw~~~ 336 (416)
T 2pm9_A 263 KGILSLDWCHQDEHL-LLSSGRDNT--VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN---KIEVQTLQ 336 (416)
T ss_dssp SCEEEEEECSSCSSC-EEEEESSSE--EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS---EEEEEESC
T ss_pred CceeEEEeCCCCCCe-EEEEeCCCC--EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCC---cEEEEEcc
Confidence 1244678999 7764 455555555 4555777776654433 3334455688999855555555443 36666665
Q ss_pred cc
Q 003886 522 DK 523 (789)
Q Consensus 522 ~~ 523 (789)
..
T Consensus 337 ~~ 338 (416)
T 2pm9_A 337 NL 338 (416)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 280
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.28 E-value=1.4e-10 Score=122.80 Aligned_cols=228 Identities=11% Similarity=0.018 Sum_probs=136.9
Q ss_pred eEEEEe-cCCceeEEEecCC---CccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCC
Q 003886 180 IQFELW-SQSQLEKEFHVPQ---TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (789)
Q Consensus 180 ~~~~i~-~~~~~~~~~~~~~---~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (789)
.+..++ .+++..+.+.... .. ..++|||||++|++....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~--------------------------- 54 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTP----------MVPMVAPGGRIAYATVNK--------------------------- 54 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCC----------CCEEECTTSSEEEEEETT---------------------------
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCc----------cceEEcCCCCEEEEEeCC---------------------------
Confidence 455555 4566665555443 23 689999999988776432
Q ss_pred cceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC----CccceEEEeeCCCCCccEEEEEeecCCceeeeeeeec
Q 003886 256 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS----LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCY 331 (789)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~----~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~ 331 (789)
...|++||+.+++.......... ..+..++|+|||+. |++........+... .
T Consensus 55 ----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~----l~~~~~~~~~~~~~~---~ 111 (337)
T 1pby_B 55 ----------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT----LAIYESPVRLELTHF---E 111 (337)
T ss_dssp ----------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSE----EEEEEEEEEECSSCE---E
T ss_pred ----------------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCE----EEEEecccccccccc---c
Confidence 25799999998886543111111 14668999999997 776642100000000 0
Q ss_pred cCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeec
Q 003886 332 NRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 411 (789)
Q Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~ 411 (789)
.....|+++|+ .+++.............+.|||||++|++.+ ..|+++|+
T Consensus 112 ~~~~~i~v~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-------------~~i~~~d~ 161 (337)
T 1pby_B 112 VQPTRVALYDA-----------------ETLSRRKAFEAPRQITMLAWARDGSKLYGLG-------------RDLHVMDP 161 (337)
T ss_dssp ECCCEEEEEET-----------------TTTEEEEEEECCSSCCCEEECTTSSCEEEES-------------SSEEEEET
T ss_pred ccCceEEEEEC-----------------CCCcEEEEEeCCCCcceeEECCCCCEEEEeC-------------CeEEEEEC
Confidence 02347999998 4554433222234467789999999987762 14999998
Q ss_pred CCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeE---------------------EE
Q 003886 412 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ---------------------VI 470 (789)
Q Consensus 412 ~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~---------------------~l 470 (789)
.+++... ... .. . ......|+|||+.+++.....+.. .|
T Consensus 162 ~~~~~~~-------~~~---~~---~-------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 162 EAGTLVE-------DKP---IQ---S-------WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TTTEEEE-------EEC---ST---T-------TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCcEee-------eee---cc---c-------cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 7754321 011 00 0 012347899998776554333222 68
Q ss_pred EEEECCCCcEEEecCC--CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 471 ISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 471 ~~~dl~tg~~~~lt~~--~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
+.+|+.+++...+... ........+++||+.+++. . ..|+++++.++
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~-----~~v~~~d~~~~ 270 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-Y-----NVLESFDLEKN 270 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-E-----SEEEEEETTTT
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-C-----CeEEEEECCCC
Confidence 8999999987644322 1223346889999987766 1 46888886543
No 281
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.28 E-value=3.3e-10 Score=119.67 Aligned_cols=268 Identities=12% Similarity=0.115 Sum_probs=156.2
Q ss_pred cccEEEEeCCCC-CeEEEEecCCCCCCeEEEEec---CC-ceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeec
Q 003886 154 TGASAVVPSPSG-SKLLVVRNPENESPIQFELWS---QS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 228 (789)
Q Consensus 154 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~i~~---~~-~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~ 228 (789)
+.+...+|||++ +.|+..+..+ ...+|+ .. ........-.+..+.| ..+.|+|||++|+..+.+
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~-----~v~~W~~~~~~~~~~~~~~~~~~h~~~v------~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDK-----TLISWKLTGDDQKFGVPVRSFKGHSHIV------QDCTLTADGAYALSASWD 86 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTS-----EEEEEEEEEETTEEEEEEEEEECCSSCE------EEEEECTTSSEEEEEETT
T ss_pred ceEEEEEccCCCccEEEEecCCc-----cEEEecCCCCCccccccceEEeCCcccE------EEEEECCCCCEEEEEeCC
Confidence 457889999977 5666555443 445552 11 1111111111222233 789999999999988876
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC-
Q 003886 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE- 307 (789)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~- 307 (789)
...+ .|+............+........|.++....+++..+..|.+||+.+.....+ ......+..+.|+|+++
T Consensus 87 ~~v~--~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~--~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 87 KTLR--LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATL--LGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp SEEE--EEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEE--CCCSSCEEEEEECCC---
T ss_pred CEEE--EEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE--eccCCcEEEEEEccCCCC
Confidence 6433 344322222222233444444556777755556666788999999987777666 33444677889998543
Q ss_pred -----CCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecC
Q 003886 308 -----GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSP 381 (789)
Q Consensus 308 -----~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~Sp 381 (789)
. |+..+ .+..|.++|+ .+. ....+..+...+...+|||
T Consensus 163 ~~~~~~----l~s~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~h~~~v~~~~~sp 206 (319)
T 3frx_A 163 DDDSVT----IISAG---------------NDKMVKAWNL-----------------NQFQIEADFIGHNSNINTLTASP 206 (319)
T ss_dssp ---CCE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCCSCEEEEEECT
T ss_pred CCCccE----EEEEe---------------CCCEEEEEEC-----------------CcchhheeecCCCCcEEEEEEcC
Confidence 3 44333 2336888887 333 3445666777788999999
Q ss_pred CCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEE
Q 003886 382 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 461 (789)
Q Consensus 382 DG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~ 461 (789)
||++|+..+.+. .|.+||+.++...... ... ..+..+.|+||+..|+..
T Consensus 207 ~g~~l~s~~~dg-----------~i~iwd~~~~~~~~~~----------~~~----------~~v~~~~~sp~~~~la~~ 255 (319)
T 3frx_A 207 DGTLIASAGKDG-----------EIMLWNLAAKKAMYTL----------SAQ----------DEVFSLAFSPNRYWLAAA 255 (319)
T ss_dssp TSSEEEEEETTC-----------EEEEEETTTTEEEEEE----------ECC----------SCEEEEEECSSSSEEEEE
T ss_pred CCCEEEEEeCCC-----------eEEEEECCCCcEEEEe----------cCC----------CcEEEEEEcCCCCEEEEE
Confidence 999998777543 5999998775432110 000 123467899999866543
Q ss_pred EEeCCeEEEEEEECCCCcEEE-ecCC--------CCCceeEEeeecCCEEEEEEe
Q 003886 462 SIWGSSQVIISVNVSSGELLR-ITPA--------ESNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 462 ~~~~~~~~l~~~dl~tg~~~~-lt~~--------~~~~~~~~~s~dg~~l~~~~s 507 (789)
. .....+| +++++.... +... ........|++||+.|+....
T Consensus 256 -~-~~~i~v~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 256 -T-ATGIKVF--SLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp -E-TTEEEEE--EETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred -c-CCCcEEE--EeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeec
Confidence 3 3334455 444444332 2211 112234578999998765543
No 282
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.28 E-value=2.8e-10 Score=125.89 Aligned_cols=267 Identities=9% Similarity=0.063 Sum_probs=143.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCce---------eEEEecCCCccc------cccCCCcccceeec
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQL---------EKEFHVPQTVHG------SVYADGWFEGISWN 216 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~---------~~~~~~~~~~~g------~v~~d~~~~~~~wS 216 (789)
..+...+|||||++||.....+ .+.+|+ .++. .....+. +... .+-.++.+..+.|+
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGG-----RVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTS-----EEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEEC
T ss_pred CcEEEEEECCCCCEEEEEcCCC-----eEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEc
Confidence 4588999999999999876543 455562 2220 0111111 1110 00000223789999
Q ss_pred CCC--CEEEEEeecCCCCCCCccCCCCC-----------CC-----------------------------CCCcCCCCCC
Q 003886 217 SDE--TLIAYVAEEPSPSKPTFSLGSTK-----------GG-----------------------------SSDKDCNSWK 254 (789)
Q Consensus 217 pDg--~~la~~~~~~~~~~~~~~~~~~~-----------~~-----------------------------~~~~~~~~~~ 254 (789)
|++ ..|+..+.+.... .|+..... .+ .....+....
T Consensus 103 ~~~~~~~l~s~s~d~~i~--iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIK--LWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp CCCSSSEEEEEECSSCEE--EEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred CCCCcceEEEeCCCCeEE--EEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 998 7788777665432 22211000 00 0012344445
Q ss_pred CcceeeCCcccccCCccCceEEEEEccC-CceEecc---C---CCCCCccceEEEeeCCCCCccEEEEEeecCCceeeee
Q 003886 255 GQGDWEEDWGETYAGKRQPSLFVININS-GEVQAVK---G---IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGI 327 (789)
Q Consensus 255 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~-g~~~~l~---~---~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~ 327 (789)
....|.++.....++ .+..|.+||+.+ ++...+. . ......+..++|+|||.. +++++.
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~----~l~s~~--------- 246 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN----TFVYSS--------- 246 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT----EEEEEE---------
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc----EEEEEe---------
Confidence 566788875444455 688999999983 4333210 0 122335778999999944 444442
Q ss_pred eeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-----eeecCCCCC------------ccCcceecCCCCEEEEEe
Q 003886 328 KYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESIS------------SAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 328 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~Lt~~~~------------~~~~p~~SpDG~~la~~s 390 (789)
.+..|.++|+ .++. ...+..+.. .+...+|||||++|+..+
T Consensus 247 -----~dg~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 247 -----SKGTIRLCDM-----------------RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp -----TTSCEEEEET-----------------TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred -----CCCeEEEEEC-----------------cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee
Confidence 2236888887 3332 345554443 688899999999988665
Q ss_pred cCCCCCCCCccccceeEEeecCC-CCCCCcccceeeEEeee-eccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeE
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVV-QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~-~~~~~~t~~~~~v~~~~-~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (789)
. ..|.+||+.. +...........+..-. ......+ ......+.|+|||+.| +++..++.
T Consensus 305 ~------------~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----i~~~~~~~~s~~~~~l-~s~s~dg~- 365 (447)
T 3dw8_B 305 Y------------LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC-----IFDKFECCWNGSDSVV-MTGSYNNF- 365 (447)
T ss_dssp S------------SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG-----GGCCCCEEECTTSSEE-EEECSTTE-
T ss_pred C------------CeEEEEeCCCCccccceeeccccccccccccccccc-----cccceEEEECCCCCEE-EEeccCCE-
Confidence 3 3599999876 33221111110000000 0000000 0012247899999976 55555554
Q ss_pred EEEEEECCCCcEEEec
Q 003886 469 VIISVNVSSGELLRIT 484 (789)
Q Consensus 469 ~l~~~dl~tg~~~~lt 484 (789)
|+.+|+.+++...+.
T Consensus 366 -v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 366 -FRMFDRNTKRDITLE 380 (447)
T ss_dssp -EEEEETTTCCEEEEE
T ss_pred -EEEEEcCCCcceeee
Confidence 555688888876543
No 283
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.27 E-value=2.8e-10 Score=122.14 Aligned_cols=270 Identities=12% Similarity=0.043 Sum_probs=152.9
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
.++|||++++-. ...+.+.+++.... .....++... ..+...+|||||+.||.....+ ..
T Consensus 71 ~~s~d~~~l~s~---------s~Dg~v~vWd~~~~-~~~~~~~~~~-----~~v~~~~~sp~g~~lasg~~d~-----~i 130 (354)
T 2pbi_B 71 DWCKDKRRIVSS---------SQDGKVIVWDSFTT-NKEHAVTMPC-----TWVMACAYAPSGCAIACGGLDN-----KC 130 (354)
T ss_dssp EECTTSSEEEEE---------ETTSEEEEEETTTC-CEEEEEECSS-----SCCCEEEECTTSSEEEEESTTS-----EE
T ss_pred EECCCCCEEEEE---------eCCCeEEEEECCCC-CcceEEecCC-----CCEEEEEECCCCCEEEEeeCCC-----CE
Confidence 346788766432 23446666664222 2122222222 3477899999999998765443 34
Q ss_pred EEec---C---C--ceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCC
Q 003886 183 ELWS---Q---S--QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 254 (789)
Q Consensus 183 ~i~~---~---~--~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (789)
.+|. . + .....+.. ..+. +..++|+||++.|+..+.+.... .|+............+....
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~---h~~~------v~~~~~~~~~~~l~t~s~D~~v~--lwd~~~~~~~~~~~~h~~~v 199 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAM---HTNY------LSACSFTNSDMQILTASGDGTCA--LWDVESGQLLQSFHGHGADV 199 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEE---CSSC------EEEEEECSSSSEEEEEETTSEEE--EEETTTCCEEEEEECCSSCE
T ss_pred EEEEEeccccccccccceeeec---cCCc------EEEEEEeCCCCEEEEEeCCCcEE--EEeCCCCeEEEEEcCCCCCe
Confidence 4441 1 0 11111111 1122 27899999999999887765432 34332222211222222222
Q ss_pred CcceeeC--CcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeecc
Q 003886 255 GQGDWEE--DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYN 332 (789)
Q Consensus 255 ~~~~~~~--d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~ 332 (789)
....+.+ +....+++..+..|.+||+.+++..... ......+..++|+|||+. |+..+.
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~----l~s~s~-------------- 260 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF-ETHESDVNSVRYYPSGDA----FASGSD-------------- 260 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE----EEEEET--------------
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCeEEEEEeCCCCE----EEEEeC--------------
Confidence 2233433 2223445556789999999988765441 233446789999999987 666552
Q ss_pred CCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCC--CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEe
Q 003886 333 RPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (789)
Q Consensus 333 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~--~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~ 409 (789)
+..|.++|+ ..+. ...+... ........|||||+.|+..+.+. .|.+|
T Consensus 261 -D~~v~lwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~-----------~i~vw 311 (354)
T 2pbi_B 261 -DATCRLYDL-----------------RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY-----------TINVW 311 (354)
T ss_dssp -TSCEEEEET-----------------TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-----------CEEEE
T ss_pred -CCeEEEEEC-----------------CCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC-----------cEEEE
Confidence 236778887 3332 2223222 22456789999999887766443 59999
Q ss_pred ecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003886 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (789)
Q Consensus 410 d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (789)
|+.++.......+ +...+..+.|+|||+.| +++..++...||
T Consensus 312 d~~~~~~~~~l~~-------------------h~~~v~~l~~spdg~~l-~sgs~D~~v~vW 353 (354)
T 2pbi_B 312 DVLKGSRVSILFG-------------------HENRVSTLRVSPDGTAF-CSGSWDHTLRVW 353 (354)
T ss_dssp ETTTCSEEEEECC-------------------CSSCEEEEEECTTSSCE-EEEETTSEEEEE
T ss_pred ECCCCceEEEEEC-------------------CCCcEEEEEECCCCCEE-EEEcCCCCEEec
Confidence 9876543211101 01134567899999855 566777777776
No 284
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.27 E-value=1.9e-10 Score=127.32 Aligned_cols=280 Identities=14% Similarity=0.113 Sum_probs=160.0
Q ss_pred cccEEEEeCCC-CCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecC-CCCEEEEEeecC
Q 003886 154 TGASAVVPSPS-GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 229 (789)
Q Consensus 154 ~~~~~~~~SPd-G~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSp-Dg~~la~~~~~~ 229 (789)
..+...+|||+ ++.||..+..+ .+.+|+ .++....... .+..+.| ..+.|+| |++.|+..+.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~-~gH~~~V------~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG-IGAGGSI------TGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTS-----CEEEECSSCCSCCEEECC-CSSSCCC------CEEEECSSCTTEEEEECSSS
T ss_pred CCEEEEEEeCCCCCEEEEEeCCC-----EEEEEECCCCCceeEEEc-cCCCCCE------EEEEEeCCCCCEEEEEeCCC
Confidence 34889999995 56677665443 466773 3333333332 2333444 8999998 788888777765
Q ss_pred CCCCCCccCCCCCC--CCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003886 230 SPSKPTFSLGSTKG--GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (789)
Q Consensus 230 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (789)
... .|+...... .........+.....|.++....+++..+..|.+||+.+..+..+. .....+..++|+|+++
T Consensus 188 ~v~--iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~--~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 188 TTR--LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLR--MHKKKVTHVALNPCCD 263 (435)
T ss_dssp CEE--EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSB--CCSSCEEEEEECTTCS
T ss_pred EEE--EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEe--cccceEEeeeecCCCc
Confidence 433 333211100 0011112233445567777655556667789999999877666552 3344678899999999
Q ss_pred CCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEE
Q 003886 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 387 (789)
Q Consensus 308 ~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la 387 (789)
. ++.++.. +..|.++|+.... ..........+...+...+|||||++|+
T Consensus 264 ~----~~~s~s~--------------d~~v~iwd~~~~~-------------~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 264 W----FLATASV--------------DQTVKIWDLRQVR-------------GKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp S----EEEEEET--------------TSBCCEEETTTCC-------------SSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred e----EEEEecC--------------cceeeEEeccccc-------------ccceEEEeeeccccccceeECCCCCeeE
Confidence 8 7766632 2356677762100 1111222234455678899999999998
Q ss_pred EEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCC-
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS- 466 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~- 466 (789)
..+.+. .|.+||+.++........ .... .+. + .......|++++..+++....++
T Consensus 313 s~~~D~-----------~i~iwd~~~~~~~~~~~~---------~~~~-~~~--~-~~~~~~~~~~~~~~~~~~~~~d~~ 368 (435)
T 4e54_B 313 TTDQKS-----------EIRVYSASQWDCPLGLIP---------HPHR-HFQ--H-LTPIKAAWHPRYNLIVVGRYPDPN 368 (435)
T ss_dssp EEESSS-----------CEEEEESSSSSSEEEECC---------CCCC-CCS--S-SCCCBCEECSSSSCEEEECCCCTT
T ss_pred EEcCCC-----------EEEEEECCCCccceEEec---------cccc-ccc--c-ceeEEEEEcCCCCEEEEEEcCCCC
Confidence 777543 589999877543211000 0000 000 0 01234567888776655433221
Q ss_pred --------eEEEEEEECCCCcEEEecC-CCC--CceeEEeeecCCEEEE
Q 003886 467 --------SQVIISVNVSSGELLRITP-AES--NFSWSLLTLDGDNIIA 504 (789)
Q Consensus 467 --------~~~l~~~dl~tg~~~~lt~-~~~--~~~~~~~s~dg~~l~~ 504 (789)
...|..+|..+|+...... .+. ..+...|+++|..|+.
T Consensus 369 ~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~las 417 (435)
T 4e54_B 369 FKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLAS 417 (435)
T ss_dssp SCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEE
T ss_pred eEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEE
Confidence 2346677888888765433 222 2233468899887653
No 285
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.27 E-value=2.5e-10 Score=123.17 Aligned_cols=255 Identities=13% Similarity=0.033 Sum_probs=130.4
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeE-EEEec-------C-
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKL-LVVRN-------P- 174 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~l-a~~~~-------~- 174 (789)
.+|||++++ +.+. . .+..+++..+ ++..++...+.. +....++|||||++| +++.+ .
T Consensus 47 ~spdg~~l~-~~~~-------~--~v~~~~~~~~-g~~~~~~~~~~~---g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 47 FDHERKNIY-GAAM-------K--KWSSFAVKSP-TEIVHEASHPIG---GHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp ECTTSSEEE-EEEB-------T--EEEEEEEEET-TEEEEEEEEECC---SSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred ECCCCCEEE-EEcc-------c--eEEEEEECCC-CCEEEeeEeecC---CCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 469998774 3322 1 4556665322 222222211100 123347899999974 45543 1
Q ss_pred ----CCCCCeEEEEecCCceeEEEec-CCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcC
Q 003886 175 ----ENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 249 (789)
Q Consensus 175 ----~~~~~~~~~i~~~~~~~~~~~~-~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (789)
.++.-.+|.+..+++..+.+.. ...... ...++.|||||++|+.. ..
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~spdG~~l~~~-~~--------------------- 164 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENT------GIHGMVFDPTETYLYSA-DL--------------------- 164 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTC------CEEEEEECTTSSEEEEE-ET---------------------
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCC------cceEEEECCCCCEEEEE-cC---------------------
Confidence 2233334444434555443332 100000 12689999999987553 21
Q ss_pred CCCCCCcceeeCCcccccCCccCceEEEEEcc-CCceEeccC--CCC-CCccceEEEeeCCCCCccEEEEEeecCCceee
Q 003886 250 CNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVKG--IPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 325 (789)
Q Consensus 250 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~~~~l~~--~~~-~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~ 325 (789)
....|++||++ +|+.+.+.. .+. ...+..++|||||+. |++.. +.+
T Consensus 165 ---------------------~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~-~~~---- 214 (365)
T 1jof_A 165 ---------------------TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY----LYALM-EAG---- 214 (365)
T ss_dssp ---------------------TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE----EEEEE-TTT----
T ss_pred ---------------------CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE----EEEEE-CCC----
Confidence 22578999998 787654311 121 345678899999997 65554 211
Q ss_pred eeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCee-------ecCCC-CC---------ccCcce-ecCCCCEEE
Q 003886 326 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-------NLTES-IS---------SAFFPR-FSPDGKFLV 387 (789)
Q Consensus 326 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------~Lt~~-~~---------~~~~p~-~SpDG~~la 387 (789)
....+|.++. ++++.. .+..+ .+ ....++ |||||++|+
T Consensus 215 -------~~v~v~~~~~-----------------~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 215 -------NRICEYVIDP-----------------ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp -------TEEEEEEECT-----------------TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred -------CeEEEEEEeC-----------------CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 1113444443 233321 12111 11 355688 999999885
Q ss_pred EEecCCCCCCCCccccceeEEeecC-CCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcccc---CCCEEEEEEE
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWP-TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS---DGCTMLLSSI 463 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~-~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~---Dg~~l~~~~~ 463 (789)
++++.. . ......|.+|++. ++.... +....... . .....+.|+| ||++|++...
T Consensus 271 -v~~~~~---~-~~~~~~i~v~~~~~~g~~~~-------~~~~~~~~--~-------~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 271 -ASSRAN---K-FELQGYIAGFKLRDCGSIEK-------QLFLSPTP--T-------SGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp -EEEEES---S-TTSCCEEEEEEECTTSCEEE-------EEEEEECS--S-------CCTTCCCEEECTTCTTEEEEECS
T ss_pred -EECCCC---C-CCCCCeEEEEEECCCCCEEE-------eeeeeecC--C-------CCcccceecCCCcCCCEEEEEEc
Confidence 443321 0 0011268888875 322211 00001000 0 1234678899 8998876655
Q ss_pred eCCeEEEEEEEC
Q 003886 464 WGSSQVIISVNV 475 (789)
Q Consensus 464 ~~~~~~l~~~dl 475 (789)
..+...+|.++.
T Consensus 330 ~~~~v~v~~~~~ 341 (365)
T 1jof_A 330 QEGWLEIYRWKD 341 (365)
T ss_dssp SSCEEEEEEEET
T ss_pred CCCeEEEEEEch
Confidence 556777887774
No 286
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.27 E-value=4.9e-11 Score=124.31 Aligned_cols=119 Identities=14% Similarity=0.209 Sum_probs=81.5
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~ 650 (789)
.+|..++.... +..|.||++||.+.+ ...|......|+ .+|.|+++|+|| +|.+............
T Consensus 12 ~~~~~~~~~~~--------g~g~~~vllHG~~~~--~~~w~~~~~~l~-~~~~vi~~Dl~G---~G~s~~~~~~~~~~~~ 77 (291)
T 3qyj_A 12 TTEARINLVKA--------GHGAPLLLLHGYPQT--HVMWHKIAPLLA-NNFTVVATDLRG---YGDSSRPASVPHHINY 77 (291)
T ss_dssp CSSCEEEEEEE--------CCSSEEEEECCTTCC--GGGGTTTHHHHT-TTSEEEEECCTT---STTSCCCCCCGGGGGG
T ss_pred cCCeEEEEEEc--------CCCCeEEEECCCCCC--HHHHHHHHHHHh-CCCEEEEEcCCC---CCCCCCCCCCcccccc
Confidence 35666764432 134679999998764 556666666664 589999999998 5654422111111123
Q ss_pred cHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
..+++.+.+..+++. +..+++.++|||+||.++..++.++|++++++|+.++.
T Consensus 78 ~~~~~~~~~~~~~~~--l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (291)
T 3qyj_A 78 SKRVMAQDQVEVMSK--LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIA 130 (291)
T ss_dssp SHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred CHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCC
Confidence 455555544444444 34568999999999999999999999999999998754
No 287
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.2e-10 Score=128.90 Aligned_cols=251 Identities=10% Similarity=0.014 Sum_probs=145.7
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
.++.+.+|||||+.||..+.+. ... + ++..+.+ .+..+.| ..++||||| .+. .
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~-----TV~-d--~~~~~~l---~gh~~~v------~~V~FsPdg-------~~~---~ 68 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDI-----SIG-Q--PKYAKDI---NCNSKNL------FHVKEFPLE-------FEN---K 68 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSE-----EEE-E--ECCCSCC---SSBGGGT------EEEEEECCC-------CCC---T
T ss_pred ccEEEEEECCCCCEEEEEcCCc-----eee-c--cccccee---cCCCccE------EEEEECCCC-------Ccc---e
Confidence 4688999999999999865542 222 2 2111111 1222233 689999999 111 1
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-----CccceEEEeeCCCC
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-----LSVGQVVWAPLNEG 308 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-----~~~~~~~wSPDg~~ 308 (789)
..+........... .+..++....|+||+....+......+.+||.++ ....+ . .+ ..+..++|||||+.
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l--~-~~~~~~~~sv~svafSPDG~~ 143 (588)
T 2j04_A 69 LDFELAQQNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNL--D-SKGNLSSRTYHCFEWNPIESS 143 (588)
T ss_dssp TTTSCCCSSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEEC--C-CSSCSTTTCEEEEEECSSSSC
T ss_pred EEEEeCCCceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeec--c-CCCccccccEEEEEEcCCCCE
Confidence 11221111111111 2356666788999976666667788899999654 33333 2 22 24779999999998
Q ss_pred CccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC--------eeec----CCCCCccCc
Q 003886 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP--------VVNL----TESISSAFF 376 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--------~~~L----t~~~~~~~~ 376 (789)
|+..+. +..|.++|+ .++. ...+ ..+...+..
T Consensus 144 ----LAsgs~---------------DGtVkIWd~-----------------~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 144 ----IVVGNE---------------DGELQFFSI-----------------RKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp ----EEEEET---------------TSEEEEEEC-----------------CCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred ----EEEEcC---------------CCEEEEEEC-----------------CCCccccccceeeeeeecccccccccEEE
Confidence 887762 336777777 3332 2444 334457899
Q ss_pred ceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCC
Q 003886 377 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 456 (789)
Q Consensus 377 p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~ 456 (789)
.+||||| |+..+.+ ..+++||+.++....+.. .+.. . ....+..+.|+ |+
T Consensus 188 VawSPdg--Laass~D-----------~tVrlWd~~~~~~~~~~~---tL~~----~--------h~~~V~svaFs--g~ 237 (588)
T 2j04_A 188 IVWYEDV--LVAALSN-----------NSVFSMTVSASSHQPVSR---MIQN----A--------SRRKITDLKIV--DY 237 (588)
T ss_dssp EEEETTE--EEEEETT-----------CCEEEECCCSSSSCCCEE---EEEC----C--------CSSCCCCEEEE--TT
T ss_pred EEEcCCc--EEEEeCC-----------CeEEEEECCCCcccccee---eecc----c--------ccCcEEEEEEE--CC
Confidence 9999999 5544433 258999987755321000 0000 0 11246678899 46
Q ss_pred EEEEEEEeCCeEEEEEEECCCCcEEEec-CCCCCceeEEe--eecCCEEEEEE
Q 003886 457 TMLLSSIWGSSQVIISVNVSSGELLRIT-PAESNFSWSLL--TLDGDNIIAVS 506 (789)
Q Consensus 457 ~l~~~~~~~~~~~l~~~dl~tg~~~~lt-~~~~~~~~~~~--s~dg~~l~~~~ 506 (789)
.|+ ++. . ..+..+|+.+++...+. .....+....+ ++++..++...
T Consensus 238 ~LA-Sa~-~--~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 238 KVV-LTC-P--GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp EEE-EEC-S--SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred EEE-EEe-C--CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 554 433 3 35666788888885554 33334555678 88875554443
No 288
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.27 E-value=1e-11 Score=136.38 Aligned_cols=279 Identities=10% Similarity=0.004 Sum_probs=160.5
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
...++|||||++|+.....+ ...+|+....... .. ...++ ......|+|||++|+..+.+.... .
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~-----~v~i~d~~~~~~~-~~-~~~~~------~~~~~~~~~~~~~l~~~~~dg~i~--i 123 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDG-----HDFLFNTIIRDGS-KM-LKRAD------YTAVDTAKLQMRRFILGTTEGDIK--V 123 (420)
T ss_dssp CTTCEEEEEETTEEEEEETT-----EEEEEECCSEETT-TT-SCSCC------EEEEEEECSSSCEEEEEETTSCEE--E
T ss_pred ccceeeeecCCeEEEEEcCC-----cEEEEEeccccee-eE-EecCC------ceEEEEEecCCCEEEEEECCCCEE--E
Confidence 34578999999999887654 4556632111110 00 01111 114557999999999887665432 3
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceE-eccCCCCCCccceEEEeeCCCCCccEEE
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~-~l~~~~~~~~~~~~~wSPDg~~~~~~l~ 314 (789)
|+............+........|.++....+++..+..|.+||+.+++.. .+ ......+..++|+|||+. |+
T Consensus 124 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~----l~ 197 (420)
T 3vl1_A 124 LDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL--IGHRATVTDIAIIDRGRN----VL 197 (420)
T ss_dssp ECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE--ECCSSCEEEEEEETTTTE----EE
T ss_pred EeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE--cCCCCcEEEEEEcCCCCE----EE
Confidence 332222222222344455556678888666666777889999999887654 34 233456789999999997 77
Q ss_pred EEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCC------------------------
Q 003886 315 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE------------------------ 369 (789)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~------------------------ 369 (789)
..+. +..|.++|+. +++ ...+..
T Consensus 198 s~~~---------------d~~v~iwd~~-----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 245 (420)
T 3vl1_A 198 SASL---------------DGTIRLWECG-----------------TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEI 245 (420)
T ss_dssp EEET---------------TSCEEEEETT-----------------TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGG
T ss_pred EEcC---------------CCcEEEeECC-----------------CCceeEEeecCCCCCCCccEEEEecCCcceeeec
Confidence 6552 2246666662 221 111211
Q ss_pred CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCC
Q 003886 370 SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 449 (789)
Q Consensus 370 ~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~ 449 (789)
....+...+|||||+.|+..+.+. .|++||+.++........ . +...+..+
T Consensus 246 ~~~~v~~~~~s~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~~--------------~----~~~~v~~~ 296 (420)
T 3vl1_A 246 STSKKNNLEFGTYGKYVIAGHVSG-----------VITVHNVFSKEQTIQLPS--------------K----FTCSCNSL 296 (420)
T ss_dssp CCCCCCTTCSSCTTEEEEEEETTS-----------CEEEEETTTCCEEEEECC--------------T----TSSCEEEE
T ss_pred ccCcccceEEcCCCCEEEEEcCCC-----------eEEEEECCCCceeEEccc--------------c----cCCCceeE
Confidence 124567789999999988766543 499999877543211000 0 11134567
Q ss_pred ccccCCCEEEEEEEeCCeEEEEEEECCCCc--EEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 450 PWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 450 ~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~--~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
.|+|+++.+++++..++.. ..+|+.+++ +..+...........++++++ ++++.+... .+.+.++..
T Consensus 297 ~~~~~~~~~l~~g~~dg~i--~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~---~v~iw~~~~ 365 (420)
T 3vl1_A 297 TVDGNNANYIYAGYENGML--AQWDLRSPECPVGEFLINEGTPINNVYFAAGA-LFVSSGFDT---SIKLDIISD 365 (420)
T ss_dssp EECSSCTTEEEEEETTSEE--EEEETTCTTSCSEEEEESTTSCEEEEEEETTE-EEEEETTTE---EEEEEEECC
T ss_pred EEeCCCCCEEEEEeCCCeE--EEEEcCCCcCchhhhhccCCCCceEEEeCCCC-EEEEecCCc---cEEEEeccC
Confidence 8999998555666666654 555776664 344443233222334556665 444444332 355556543
No 289
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.26 E-value=3.2e-11 Score=130.39 Aligned_cols=233 Identities=10% Similarity=0.056 Sum_probs=134.2
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~ 234 (789)
.+...+|||||++||..... +.-.+|.+. .+....+..+ ....+.| ..+.|+|||+.|+..+.+
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d--~~i~iw~~~-~~~~~~~~~~-~~h~~~v------~~~~~s~~~~~l~s~s~d------ 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT--NQVELYEQD-GNGWKHARTF-SDHDKIV------TCVDWAPKSNRIVTCSQD------ 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS--SCBCEEEEE-TTEEEECCCB-CCCSSCE------EEEEECTTTCCEEEEETT------
T ss_pred cEEEEEECCCCCEEEEecCC--CEEEEEEcc-CCceEEEEEE-ecCCceE------EEEEEeCCCCEEEEEeCC------
Confidence 47788999999999876443 223333333 2211222122 1222233 789999999999886543
Q ss_pred CccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCc----eEeccCCCCCCccceEEEeeCCCCCc
Q 003886 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~----~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
..|.+||+.+++ ...+ ......+..+.|+|||+.
T Consensus 77 --------------------------------------~~v~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~-- 114 (377)
T 3dwl_C 77 --------------------------------------RNAYVYEKRPDGTWKQTLVL--LRLNRAATFVRWSPNEDK-- 114 (377)
T ss_dssp --------------------------------------SSEEEC------CCCCEEEC--CCCSSCEEEEECCTTSSC--
T ss_pred --------------------------------------CeEEEEEcCCCCceeeeeEe--cccCCceEEEEECCCCCE--
Confidence 468889988876 3333 334456789999999998
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC----eeecCC-CCCccCcceecCCCCE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNLTE-SISSAFFPRFSPDGKF 385 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~Lt~-~~~~~~~p~~SpDG~~ 385 (789)
|+..+. ...|.++|+ .++. .+.+.. +...+...+|+|||+.
T Consensus 115 --l~~~~~---------------d~~i~iwd~-----------------~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 115 --FAVGSG---------------ARVISVCYF-----------------EQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp --CEEEES---------------SSCEEECCC----------------------CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred --EEEEec---------------CCeEEEEEE-----------------CCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 877662 235778887 3332 456665 6777889999999999
Q ss_pred EEEEecCCCCCCCCccccceeEEeecCCCCCCCccc--------ceeeEEeeeeccCCCCCccccccCCCCCccccCCCE
Q 003886 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE--------KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 457 (789)
Q Consensus 386 la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~--------~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~ 457 (789)
|+..+.+. .|++||+..++...... ......... . ....+..+.|+|||+.
T Consensus 161 l~~~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 161 LAAGCADR-----------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--P--------SGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EEEEESSS-----------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--C--------CSSSEEEEEECTTSSC
T ss_pred EEEEeCCC-----------EEEEEEEEecccCCCccccccccccchhhhhhcc--c--------CCceEEEEEECCCCCE
Confidence 98877553 48888886533211000 001111111 0 1123457789999995
Q ss_pred EEEEEEeCCeEEEEEEECCCCcE-----EEecCCCCCceeEEeeecCCEEE
Q 003886 458 MLLSSIWGSSQVIISVNVSSGEL-----LRITPAESNFSWSLLTLDGDNII 503 (789)
Q Consensus 458 l~~~~~~~~~~~l~~~dl~tg~~-----~~lt~~~~~~~~~~~s~dg~~l~ 503 (789)
| +++..++...|| |+.+++. ..+......+....|+++++.|+
T Consensus 220 l-~~~~~d~~i~iw--d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 267 (377)
T 3dwl_C 220 L-AYAGHDSSVTIA--YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVA 267 (377)
T ss_dssp E-EEEETTTEEC-C--EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEE
T ss_pred E-EEEeCCCcEEEE--ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEE
Confidence 5 455556655555 5556653 23333333455568889887554
No 290
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.25 E-value=6.2e-11 Score=149.23 Aligned_cols=267 Identities=11% Similarity=0.023 Sum_probs=161.1
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
..+|||+.++.... .+.+.++++... .....+.... ..+...+|||||++|+..+..+ .+
T Consensus 968 ~~sp~g~~l~~g~~---------~g~i~i~d~~~~-~~~~~~~~h~-----~~v~~l~~s~dg~~l~s~~~dg-----~i 1027 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDE---------DGAIKIIELPNN-RVFSSGVGHK-----KAVRHIQFTADGKTLISSSEDS-----VI 1027 (1249)
T ss_dssp EECTTSSEEEEEET---------TSCCEEEETTTT-SCEEECCCCS-----SCCCCEEECSSSSCEEEECSSS-----BE
T ss_pred EEcCCCCEEEEEcC---------CCCEEEEEcCCC-ceeeecccCC-----CceEEEEECCCCCEEEEEcCCC-----EE
Confidence 35788887766432 234555555222 1112222222 4577899999999999876543 45
Q ss_pred EEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 183 ELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 183 ~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
.+|+ .++..... ...+. ...+.|+||++.+ ..+
T Consensus 1028 ~vwd~~~~~~~~~~----~~~~~------v~~~~~~~~~~l~-~~~---------------------------------- 1062 (1249)
T 3sfz_A 1028 QVWNWQTGDYVFLQ----AHQET------VKDFRLLQDSRLL-SWS---------------------------------- 1062 (1249)
T ss_dssp EEEETTTTEEECCB----CCSSC------EEEEEECSSSEEE-EEE----------------------------------
T ss_pred EEEECCCCceEEEe----cCCCc------EEEEEEcCCCcEE-EEE----------------------------------
Confidence 6663 33322211 11122 2789999988643 332
Q ss_pred CCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEE
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (789)
.+..|.+||+.+++..... ......+..++|+|||+. |+..+. +..|+++
T Consensus 1063 ----------~dg~v~vwd~~~~~~~~~~-~~~~~~v~~~~~s~d~~~----l~s~s~---------------d~~v~iw 1112 (1249)
T 3sfz_A 1063 ----------FDGTVKVWNVITGRIERDF-TCHQGTVLSCAISSDATK----FSSTSA---------------DKTAKIW 1112 (1249)
T ss_dssp ----------SSSEEEEEETTTTCCCEEE-ECCSSCCCCEEECSSSSS----CEEECC---------------SSCCCEE
T ss_pred ----------CCCcEEEEECCCCceeEEE-cccCCcEEEEEECCCCCE----EEEEcC---------------CCcEEEE
Confidence 2257999999988754331 223446788999999998 877662 2357777
Q ss_pred ecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcc
Q 003886 341 RVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 420 (789)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t 420 (789)
|+. .......+..+.+.+...+|||||+.|+..+.+. .|++||+.++......
T Consensus 1113 d~~----------------~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg-----------~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A 1113 SFD----------------LLSPLHELKGHNGCVRCSAFSLDGILLATGDDNG-----------EIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp CSS----------------SSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTS-----------CCCEEESSSSCCCCCC
T ss_pred ECC----------------CcceeeeeccCCCcEEEEEECCCCCEEEEEeCCC-----------EEEEEECCCCceEEEe
Confidence 772 3334556666777788999999999998877543 4889999876653221
Q ss_pred cceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC-CCceeEEeeecC
Q 003886 421 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDG 499 (789)
Q Consensus 421 ~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg 499 (789)
.... ... ... .....+..+.|+|||+.|+.. ++ .+..+|+.+|+.......+ ..+....|++||
T Consensus 1166 ~~~~-~~~--------~~~-~~~~~v~~l~fs~dg~~l~s~---~g--~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg 1230 (1249)
T 3sfz_A 1166 APIS-VEE--------GTA-THGGWVTDVCFSPDSKTLVSA---GG--YLKWWNVATGDSSQTFYTNGTNLKKIHVSPDF 1230 (1249)
T ss_dssp CCCC-----------------CCSCCCEEEECTTSSCEEEE---SS--SEEEBCSSSCBCCCCCCCSSCCCCCCEECSSS
T ss_pred cccc-ccc--------ccc-ccCceEEEEEECCCCCEEEEC---CC--eEEEEECCCCceeeeeeccCCcccEEEECCCC
Confidence 1000 000 000 011245678999999977543 24 4566677788765443322 234456889999
Q ss_pred CEEEEEE
Q 003886 500 DNIIAVS 506 (789)
Q Consensus 500 ~~l~~~~ 506 (789)
+.++...
T Consensus 1231 ~~l~~~~ 1237 (1249)
T 3sfz_A 1231 RTYVTVD 1237 (1249)
T ss_dssp CCEEEEC
T ss_pred CEEEEec
Confidence 8776543
No 291
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.25 E-value=5.3e-11 Score=128.60 Aligned_cols=211 Identities=13% Similarity=0.086 Sum_probs=116.1
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCC-CCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
++|||++++... ..+.+.++++.... .....+.... ..+...+|||||++|+..+..+ .+
T Consensus 19 ~s~~g~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~s~~~~~l~s~s~d~-----~v 79 (377)
T 3dwl_C 19 FNSQRTEFVTTT---------ATNQVELYEQDGNGWKHARTFSDHD-----KIVTCVDWAPKSNRIVTCSQDR-----NA 79 (377)
T ss_dssp ECSSSSEEECCC---------SSSCBCEEEEETTEEEECCCBCCCS-----SCEEEEEECTTTCCEEEEETTS-----SE
T ss_pred ECCCCCEEEEec---------CCCEEEEEEccCCceEEEEEEecCC-----ceEEEEEEeCCCCEEEEEeCCC-----eE
Confidence 468998776532 22345555553321 1122332222 4588999999999999887543 35
Q ss_pred EEec--CCc-eeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCccee
Q 003886 183 ELWS--QSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (789)
Q Consensus 183 ~i~~--~~~-~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (789)
.+|+ .++ ........ ...+.| ..+.|+|||+.|+..+.+
T Consensus 80 ~vwd~~~~~~~~~~~~~~-~~~~~v------~~~~~~~~~~~l~~~~~d------------------------------- 121 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVLL-RLNRAA------TFVRWSPNEDKFAVGSGA------------------------------- 121 (377)
T ss_dssp EEC------CCCCEEECC-CCSSCE------EEEECCTTSSCCEEEESS-------------------------------
T ss_pred EEEEcCCCCceeeeeEec-ccCCce------EEEEECCCCCEEEEEecC-------------------------------
Confidence 5662 222 11222221 122223 789999999999886543
Q ss_pred eCCcccccCCccCceEEEEEccCCc----eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCc
Q 003886 260 EEDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (789)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~----~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~ 335 (789)
..|.+||+.+++ ...+. .+....+..++|+|||+. |+..+. +.
T Consensus 122 -------------~~i~iwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l~~~~~---------------d~ 168 (377)
T 3dwl_C 122 -------------RVISVCYFEQENDWWVSKHLK-RPLRSTILSLDWHPNNVL----LAAGCA---------------DR 168 (377)
T ss_dssp -------------SCEEECCC-----CCCCEEEC-SSCCSCEEEEEECTTSSE----EEEEES---------------SS
T ss_pred -------------CeEEEEEECCcccceeeeEee-cccCCCeEEEEEcCCCCE----EEEEeC---------------CC
Confidence 457788888775 34452 113456789999999987 776652 22
Q ss_pred ceEEEecccccchhhh-hhhhcCCCCCCC-eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCC
Q 003886 336 ALYAVRVSLYKSEASE-LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (789)
Q Consensus 336 ~l~~~d~~~~~~~~~~-~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~ 413 (789)
.|+++|+......... ..........++ ...+ .+...+...+|||||++|+..+.+. .|.+||+.+
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~-----------~i~iwd~~~ 236 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS-----------SVTIAYPSA 236 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT-----------EEC-CEECS
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC-----------cEEEEECCC
Confidence 4666665210000000 000000000111 2233 5566688899999999998877543 588999887
Q ss_pred CCC
Q 003886 414 NGN 416 (789)
Q Consensus 414 ~~~ 416 (789)
+..
T Consensus 237 ~~~ 239 (377)
T 3dwl_C 237 PEQ 239 (377)
T ss_dssp TTS
T ss_pred CCC
Confidence 654
No 292
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.24 E-value=5.6e-10 Score=121.93 Aligned_cols=229 Identities=12% Similarity=0.067 Sum_probs=139.0
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCC-------ceeEEEecCCCccccccCCCcccceeecCCCC-EE
Q 003886 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQS-------QLEKEFHVPQTVHGSVYADGWFEGISWNSDET-LI 222 (789)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~--~~~-------~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~-~l 222 (789)
+.+...+||| +|+.|+..+..+ .+.+| ..+ +....+.. ..+.| ..+.|+|||+ .|
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg-----~v~vw~~~~~~~~~~~~~~~~~~~~---h~~~v------~~~~~~p~~~~~l 147 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDC-----TVMVWEIPDGGLVLPLREPVITLEG---HTKRV------GIVAWHPTAQNVL 147 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTS-----EEEEEECCTTCCSSCBCSCSEEEEC---CSSCE------EEEEECSSBTTEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCC-----eEEEEEccCCCCccccCCceEEecC---CCCeE------EEEEECcCCCCEE
Confidence 4688999999 888888876543 45556 222 22222221 11222 7899999995 45
Q ss_pred EEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccC-CCCCCccceEE
Q 003886 223 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVV 301 (789)
Q Consensus 223 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~-~~~~~~~~~~~ 301 (789)
+..+. +..|.+||+.+++...... ......+..++
T Consensus 148 ~s~~~--------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 148 LSAGC--------------------------------------------DNVILVWDVGTGAAVLTLGPDVHPDTIYSVD 183 (402)
T ss_dssp EEEET--------------------------------------------TSCEEEEETTTTEEEEEECTTTCCSCEEEEE
T ss_pred EEEcC--------------------------------------------CCEEEEEECCCCCccEEEecCCCCCceEEEE
Confidence 44322 2568999999887654410 12334678999
Q ss_pred EeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeec-CCCCCc-cCcce
Q 003886 302 WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL-TESISS-AFFPR 378 (789)
Q Consensus 302 wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~L-t~~~~~-~~~p~ 378 (789)
|+|||+. |+..+ .+..|+++|+ .+++ ...+ ..+.+. .....
T Consensus 184 ~~~~~~~----l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 184 WSRDGAL----ICTSC---------------RDKRVRVIEP-----------------RKGTVVAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp ECTTSSC----EEEEE---------------TTSEEEEEET-----------------TTTEEEEEEECSSCSSSCCEEE
T ss_pred ECCCCCE----EEEEe---------------cCCcEEEEeC-----------------CCCceeeeeccCCCCCcceEEE
Confidence 9999998 77766 2346888998 3333 3344 344433 67899
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEE
Q 003886 379 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 458 (789)
Q Consensus 379 ~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l 458 (789)
|+|||+.|+...... ....|.+||+.++...... ..+ . ....+..+.|+|||+.|
T Consensus 228 ~~~~~~~l~~g~~~~--------~d~~i~iwd~~~~~~~~~~------~~~---~--------~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 228 FVSEGKILTTGFSRM--------SERQVALWDTKHLEEPLSL------QEL---D--------TSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp ECSTTEEEEEEECTT--------CCEEEEEEETTBCSSCSEE------EEC---C--------CCSSCEEEEEETTTTEE
T ss_pred EcCCCcEEEEeccCC--------CCceEEEEcCccccCCceE------Eec---c--------CCCceeEEEEcCCCCEE
Confidence 999999777653211 1246999998775431100 000 0 00134567899999988
Q ss_pred EEEEEeCCeEEEEEEECCCCc--EEEecCC--CCCceeEEeeecCCEEE
Q 003886 459 LLSSIWGSSQVIISVNVSSGE--LLRITPA--ESNFSWSLLTLDGDNII 503 (789)
Q Consensus 459 ~~~~~~~~~~~l~~~dl~tg~--~~~lt~~--~~~~~~~~~s~dg~~l~ 503 (789)
++++..++...+| |+.+++ +..+... ........|++++..++
T Consensus 283 ~~~g~~dg~i~i~--d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 283 YLCGKGDSSIRYF--EITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EEEETTCSCEEEE--EECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred EEEEcCCCeEEEE--EecCCCcceEeecccccCCcccceEEecccccce
Confidence 7776556666665 445665 4444322 23344567888877543
No 293
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.22 E-value=2e-09 Score=124.27 Aligned_cols=279 Identities=12% Similarity=0.119 Sum_probs=160.7
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCC---CCccceeecCCcceecc-cEEEEeCC--CCCeEEEEecCCCC
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN---ENSVTFQWAPFPVEMTG-ASAVVPSP--SGSKLLVVRNPENE 177 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~lt~~~~~~~~~~-~~~~~~SP--dG~~la~~~~~~~~ 177 (789)
+||||+++++..+ ..+.++++.+.. .....+.... .. +...+||| ||++||.....+
T Consensus 26 ~spdg~~l~~~~~----------~~v~v~~~~~~~~~~~~~~~~~~h~-----~~~v~~~~~sp~~~~~~l~s~~~dg-- 88 (615)
T 1pgu_A 26 YDPTTNAIAYPCG----------KSAFVRCLDDGDSKVPPVVQFTGHG-----SSVVTTVKFSPIKGSQYLCSGDESG-- 88 (615)
T ss_dssp EETTTTEEEEEET----------TEEEEEECCSSCCSSCSEEEECTTT-----TSCEEEEEECSSTTCCEEEEEETTS--
T ss_pred ECCCCCEEEEecC----------CeEEEEECCCCCCccccceEEecCC-----CceEEEEEECcCCCCCEEEEecCCC--
Confidence 4699999988641 246666664221 2223333333 45 78999999 999999876643
Q ss_pred CCeEEEEec--CC------ceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcC
Q 003886 178 SPIQFELWS--QS------QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 249 (789)
Q Consensus 178 ~~~~~~i~~--~~------~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (789)
.+.+|+ .+ +......+. ...+.+ ..+.|||||+.|+....+..
T Consensus 89 ---~v~vw~~~~~~~~~~~~~~~~~~~~-~~~~~v------~~~~~s~~~~~l~~~~~~~~------------------- 139 (615)
T 1pgu_A 89 ---KVIVWGWTFDKESNSVEVNVKSEFQ-VLAGPI------SDISWDFEGRRLCVVGEGRD------------------- 139 (615)
T ss_dssp ---EEEEEEEEEEGGGTEEEEEEEEEEE-CCSSCE------EEEEECTTSSEEEEEECCSS-------------------
T ss_pred ---EEEEEeCCCCcccccccccccchhh-cccccE------EEEEEeCCCCEEEEeccCCC-------------------
Confidence 355552 22 112222221 112222 78999999999998765431
Q ss_pred CCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeee
Q 003886 250 CNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 329 (789)
Q Consensus 250 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~ 329 (789)
....|++|| .+.....+ ......+..+.|+||++. +++++.
T Consensus 140 ---------------------~~~~v~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~----~l~~~~----------- 180 (615)
T 1pgu_A 140 ---------------------NFGVFISWD-SGNSLGEV--SGHSQRINACHLKQSRPM----RSMTVG----------- 180 (615)
T ss_dssp ---------------------CSEEEEETT-TCCEEEEC--CSCSSCEEEEEECSSSSC----EEEEEE-----------
T ss_pred ---------------------CccEEEEEE-CCCcceee--ecCCccEEEEEECCCCCc----EEEEEe-----------
Confidence 225677777 23334444 233446788999999996 666552
Q ss_pred eccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCC---ccCcceecCC-CCEEEEEecCCCCCCCCccccce
Q 003886 330 CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS---SAFFPRFSPD-GKFLVFLSAKSSVDSGAHSATDS 405 (789)
Q Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~---~~~~p~~SpD-G~~la~~s~~~~~~~g~~~~~~~ 405 (789)
....|.++|+. .......+..+.. .+...+|+|| |++|+..+.+. .
T Consensus 181 ---~d~~v~vwd~~----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----------~ 230 (615)
T 1pgu_A 181 ---DDGSVVFYQGP----------------PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----------K 230 (615)
T ss_dssp ---TTTEEEEEETT----------------TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----------C
T ss_pred ---CCCcEEEEeCC----------------CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC-----------e
Confidence 23368888872 2233455655655 6888999999 99888777543 5
Q ss_pred eEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecC
Q 003886 406 LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 485 (789)
Q Consensus 406 L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~ 485 (789)
|++||+.+++...... .... . ....+..+.|+ |++.|+ ++..++. |..+|+.+++......
T Consensus 231 i~vwd~~~~~~~~~~~---------~~~~--~----~~~~v~~~~~~-~~~~l~-~~~~d~~--i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIE---------DDQE--P----VQGGIFALSWL-DSQKFA-TVGADAT--IRVWDVTTSKCVQKWT 291 (615)
T ss_dssp EEEEETTTCCEEEECC---------BTTB--C----CCSCEEEEEES-SSSEEE-EEETTSE--EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCCEeEEec---------cccc--c----cCCceEEEEEc-CCCEEE-EEcCCCc--EEEEECCCCcEEEEEc
Confidence 9999987755421110 0000 0 01124466788 888664 4444444 5556777777655433
Q ss_pred CC-----CCceeEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 486 AE-----SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 486 ~~-----~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
.. .......+ ++++.++....+. .+.+.++.
T Consensus 292 ~~~~~~~~~~~~~~~-~~~~~l~~~~~~g----~i~~~d~~ 327 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVA-TGNGRIISLSLDG----TLNFYELG 327 (615)
T ss_dssp CCTTCGGGCEEEEEE-EETTEEEEEETTS----CEEEEETT
T ss_pred CCCCcccCceeEEEe-CCCCeEEEEECCC----CEEEEECC
Confidence 22 11122233 3666665554332 25555543
No 294
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=99.22 E-value=1.4e-10 Score=121.92 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=84.9
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchh-hH-HHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHH
Q 003886 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (789)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~-~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~ 653 (789)
+.+.++.|.++.. ...+.||++||...+ ... |. .....|+++||.|+++|+|| +|.... ....+
T Consensus 16 l~~~i~~p~~~~~-~~~~~VvllHG~~~~--~~~~~~~~l~~~L~~~G~~v~~~d~~g---~g~~~~--------~~~~~ 81 (317)
T 1tca_A 16 LDAGLTCQGASPS-SVSKPILLVPGTGTT--GPQSFDSNWIPLSTQLGYTPCWISPPP---FMLNDT--------QVNTE 81 (317)
T ss_dssp HHHTEEETTBCTT-SCSSEEEEECCTTCC--HHHHHTTTHHHHHHTTTCEEEEECCTT---TTCSCH--------HHHHH
T ss_pred HhheeeCCCCCCC-CCCCeEEEECCCCCC--cchhhHHHHHHHHHhCCCEEEEECCCC---CCCCcH--------HHHHH
Confidence 4445666765532 345678999997664 333 66 67788999999999999987 332211 12356
Q ss_pred HHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCC---CceeEEEEeCCccc
Q 003886 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCN 707 (789)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p---~~~~a~v~~~pv~~ 707 (789)
++.+.+++++++ .+.+++.|+|||+||.++.+++.+++ ++++++|+.+|...
T Consensus 82 ~l~~~i~~~~~~--~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 82 YMVNAITALYAG--SGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHHHH--TTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHH--hCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 788888888876 34578999999999999999888765 78999999988643
No 295
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.22 E-value=1.1e-09 Score=121.76 Aligned_cols=175 Identities=13% Similarity=0.065 Sum_probs=106.8
Q ss_pred ceEEEEEcc--CCceEec-cCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchh
Q 003886 273 PSLFVININ--SGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 349 (789)
Q Consensus 273 ~~l~v~d~~--~g~~~~l-~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 349 (789)
..|.+||+. +++.... ........+..++|+|||+. |+..+ ....++.+++
T Consensus 125 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~----l~~~~---------------~~g~v~~~~~------- 178 (450)
T 2vdu_B 125 KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT----VIIAD---------------KFGDVYSIDI------- 178 (450)
T ss_dssp TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEET-------
T ss_pred CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE----EEEEe---------------CCCcEEEEec-------
Confidence 578899988 6655443 11122345678999999997 76665 2336888887
Q ss_pred hhhhhhcCCCCCCCe-----eecCCCCCccCcceecCC---CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCc-c
Q 003886 350 SELELKESSSEDLPV-----VNLTESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-L 420 (789)
Q Consensus 350 ~~~~~~~~~~~~~~~-----~~Lt~~~~~~~~p~~SpD---G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~-t 420 (789)
.++.. ..+..+...+...+|||| |++|+..+.+. .|++||+.++..... .
T Consensus 179 ----------~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----------~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 179 ----------NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----------HIKISHYPQCFIVDKWL 237 (450)
T ss_dssp ----------TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS-----------CEEEEEESCTTCEEEEC
T ss_pred ----------CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC-----------cEEEEECCCCceeeeee
Confidence 22222 245555667888999999 88887766442 589999877543211 1
Q ss_pred cceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC--------------
Q 003886 421 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-------------- 486 (789)
Q Consensus 421 ~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~-------------- 486 (789)
.+. ...+..+.|+ ||+.|+ ++..++ .|..+|+.+++.......
T Consensus 238 ~~h-------------------~~~v~~~~~s-d~~~l~-s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 238 FGH-------------------KHFVSSICCG-KDYLLL-SAGGDD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp CCC-------------------SSCEEEEEEC-STTEEE-EEESSS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC
T ss_pred cCC-------------------CCceEEEEEC-CCCEEE-EEeCCC--eEEEEECCCCcEeeeecchhhhhhhhhhcccc
Confidence 010 0123466899 998664 444444 456668888875543321
Q ss_pred ------------CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEee
Q 003886 487 ------------ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (789)
Q Consensus 487 ------------~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~ 520 (789)
...+....++++++.+++..... ..|.+.++
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d---~~i~iw~~ 337 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT---KCIIILEM 337 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTC---SEEEEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCC---CeEEEEEe
Confidence 11233456777787776665333 33666665
No 296
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.22 E-value=2.5e-09 Score=116.74 Aligned_cols=262 Identities=14% Similarity=0.129 Sum_probs=155.7
Q ss_pred ceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccc
Q 003886 125 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHG 202 (789)
Q Consensus 125 ~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g 202 (789)
..+.+.++++.+ ++...+.... ....+...+|||||++|+.....+ .+.+|+ .++..+.+. ...+
T Consensus 111 ~d~~v~lw~~~~--~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~---~~~~ 177 (401)
T 4aez_A 111 LERNVYVWNADS--GSVSALAETD---ESTYVASVKWSHDGSFLSVGLGNG-----LVDIYDVESQTKLRTMA---GHQA 177 (401)
T ss_dssp ETTEEEEEETTT--CCEEEEEECC---TTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC---CCSS
T ss_pred CCCeEEEeeCCC--CcEeEeeecC---CCCCEEEEEECCCCCEEEEECCCC-----eEEEEECcCCeEEEEec---CCCC
Confidence 344677777632 2322222211 014588999999999999877543 355663 344333332 2222
Q ss_pred cccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccC
Q 003886 203 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 282 (789)
Q Consensus 203 ~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~ 282 (789)
.+ ..++| +++.|+..+. +..|.+||+..
T Consensus 178 ~v------~~~~~--~~~~l~~~~~--------------------------------------------dg~i~i~d~~~ 205 (401)
T 4aez_A 178 RV------GCLSW--NRHVLSSGSR--------------------------------------------SGAIHHHDVRI 205 (401)
T ss_dssp CE------EEEEE--ETTEEEEEET--------------------------------------------TSEEEEEETTS
T ss_pred ce------EEEEE--CCCEEEEEcC--------------------------------------------CCCEEEEeccc
Confidence 22 67888 4566665432 35788999874
Q ss_pred -Cc-eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCC
Q 003886 283 -GE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 360 (789)
Q Consensus 283 -g~-~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 360 (789)
+. ...+ ......+..+.|+|||+. |+..+ .+..|+++|+ .
T Consensus 206 ~~~~~~~~--~~~~~~v~~~~~~~~~~~----l~s~~---------------~d~~v~iwd~-----------------~ 247 (401)
T 4aez_A 206 ANHQIGTL--QGHSSEVCGLAWRSDGLQ----LASGG---------------NDNVVQIWDA-----------------R 247 (401)
T ss_dssp SSCEEEEE--ECCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET-----------------T
T ss_pred CcceeeEE--cCCCCCeeEEEEcCCCCE----EEEEe---------------CCCeEEEccC-----------------C
Confidence 33 3333 233456788999999987 66655 2336888898 3
Q ss_pred CC-CeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCc
Q 003886 361 DL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 439 (789)
Q Consensus 361 ~~-~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~ 439 (789)
++ ....+..+...+...+|+|+|+.++...... ....|++||+.++...... ...
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs--------~d~~i~i~d~~~~~~~~~~----------~~~------ 303 (401)
T 4aez_A 248 SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT--------MDKQIHFWNAATGARVNTV----------DAG------ 303 (401)
T ss_dssp CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT--------TTCEEEEEETTTCCEEEEE----------ECS------
T ss_pred CCCccEEecCCcceEEEEEECCCCCCEEEEecCC--------CCCEEEEEECCCCCEEEEE----------eCC------
Confidence 33 3445666777889999999998887765311 1246999998875432111 000
Q ss_pred cccccCCCCCccccCCCEEEEEEE-eCCeEEEEEEECCCCcEEEe---cCCCCCceeEEeeecCCEEEEEEeCCCCCCeE
Q 003886 440 GLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISVNVSSGELLRI---TPAESNFSWSLLTLDGDNIIAVSSSPVDVPQV 515 (789)
Q Consensus 440 g~~~~~~~~~~ws~Dg~~l~~~~~-~~~~~~l~~~dl~tg~~~~l---t~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i 515 (789)
..+..+.|+|||+.++..+. .++...+| |+.+++...+ ......+....+++++..|+....+ ..|
T Consensus 304 ----~~v~~~~~s~~~~~l~~~~g~~dg~i~v~--~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d----g~i 373 (401)
T 4aez_A 304 ----SQVTSLIWSPHSKEIMSTHGFPDNNLSIW--SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD----ENL 373 (401)
T ss_dssp ----SCEEEEEECSSSSEEEEEECTTTCEEEEE--EEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT----SEE
T ss_pred ----CcEEEEEECCCCCeEEEEeecCCCcEEEE--ecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC----CcE
Confidence 12446789999997765532 34555555 4446655543 2333344556889998876654332 246
Q ss_pred EEEeeccc
Q 003886 516 KYGYFVDK 523 (789)
Q Consensus 516 ~~~~~~~~ 523 (789)
.+.++.++
T Consensus 374 ~iw~~~~~ 381 (401)
T 4aez_A 374 KFWRVYDG 381 (401)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 66666543
No 297
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.21 E-value=3.4e-09 Score=120.36 Aligned_cols=303 Identities=8% Similarity=-0.012 Sum_probs=165.5
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCC-ccceeecCCcceecccEEEEeCC----CCCeEEEEecCCCCC
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSP----SGSKLLVVRNPENES 178 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~SP----dG~~la~~~~~~~~~ 178 (789)
.||||++++.. +. ...|.++++.....+ ...+..+ ......+||| ||++|+.....+
T Consensus 186 ~spdg~~l~v~-~~--------d~~V~v~D~~~~t~~~~~~i~~g------~~p~~va~sp~~~~dg~~l~v~~~~~--- 247 (543)
T 1nir_A 186 MSASGRYLLVI-GR--------DARIDMIDLWAKEPTKVAEIKIG------IEARSVESSKFKGYEDRYTIAGAYWP--- 247 (543)
T ss_dssp ECTTSCEEEEE-ET--------TSEEEEEETTSSSCEEEEEEECC------SEEEEEEECCSTTCTTTEEEEEEEES---
T ss_pred ECCCCCEEEEE-CC--------CCeEEEEECcCCCCcEEEEEecC------CCcceEEeCCCcCCCCCEEEEEEccC---
Confidence 57898877443 21 145777766211111 1122211 3467889999 999987765432
Q ss_pred CeEEEEe-cCCceeEEEecCCC-ccccccC-CCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCC
Q 003886 179 PIQFELW-SQSQLEKEFHVPQT-VHGSVYA-DGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (789)
Q Consensus 179 ~~~~~i~-~~~~~~~~~~~~~~-~~g~v~~-d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (789)
.++.+++ .+++..+.+..... ..+..|. +.....+.+|||++.+++...
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~---------------------------- 299 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK---------------------------- 299 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET----------------------------
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC----------------------------
Confidence 2344444 45555555554211 0000011 112367899999987765432
Q ss_pred cceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCc
Q 003886 256 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (789)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~ 335 (789)
....|++||..+++...+..++.......+.|+|||++ ++..+ .. ..
T Consensus 300 ---------------~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~----l~va~-~~-------------~~ 346 (543)
T 1nir_A 300 ---------------ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRY----FMTAA-NN-------------SN 346 (543)
T ss_dssp ---------------TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCE----EEEEE-GG-------------GT
T ss_pred ---------------CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCE----EEEEe-cC-------------CC
Confidence 23679999988765322110222334667899999997 54443 21 22
Q ss_pred ceEEEecccccchhhhhhhhcCCCCCCCeee-cCCCC--CccCcce-ecCCCCEEEEEecCCCCCCCCccccceeEEeec
Q 003886 336 ALYAVRVSLYKSEASELELKESSSEDLPVVN-LTESI--SSAFFPR-FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 411 (789)
Q Consensus 336 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-Lt~~~--~~~~~p~-~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~ 411 (789)
.|.++|+ .++++.. +..+. ....... ++||+..++.+.... ...|.+||.
T Consensus 347 ~v~v~D~-----------------~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~---------d~~V~v~d~ 400 (543)
T 1nir_A 347 KVAVIDS-----------------KDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG---------DGSISLIGT 400 (543)
T ss_dssp EEEEEET-----------------TTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS---------SSEEEEEEC
T ss_pred eEEEEEC-----------------CCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC---------CceEEEEEe
Confidence 6888998 5555443 32211 1112233 478876664443321 236889998
Q ss_pred CCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeC----CeEEEEEEECCCCcEE-Ee---
Q 003886 412 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG----SSQVIISVNVSSGELL-RI--- 483 (789)
Q Consensus 412 ~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~----~~~~l~~~dl~tg~~~-~l--- 483 (789)
++.+.... ...++..+.... .....+.++|||+.|++..... ....|.++|+++++.. .+
T Consensus 401 ~~~~~~~~---~~~~v~~l~~~g---------~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v 468 (543)
T 1nir_A 401 DPKNHPQY---AWKKVAELQGQG---------GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI 468 (543)
T ss_dssp CTTTCTTT---BTSEEEEEECSC---------SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECH
T ss_pred CCCCCchh---cCeEEEEEEcCC---------CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeec
Confidence 77332110 012222222211 1234567899999887654211 1346888898887754 32
Q ss_pred ------cCCCCCceeEEeeecCCEEEEEEeCC-CCCCeEEEEeeccc
Q 003886 484 ------TPAESNFSWSLLTLDGDNIIAVSSSP-VDVPQVKYGYFVDK 523 (789)
Q Consensus 484 ------t~~~~~~~~~~~s~dg~~l~~~~ss~-~~p~~i~~~~~~~~ 523 (789)
...........|+++|+.++++.-+. .....|.++|..+.
T Consensus 469 ~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 469 AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp HHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred hhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 12222344568999999998876433 34567888886654
No 298
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.21 E-value=1e-11 Score=140.40 Aligned_cols=132 Identities=23% Similarity=0.259 Sum_probs=96.3
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchh-hHHHHHHHH-HCCcEEEEEcCC-CCCCCCchhhccCCCC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLS-SVGYSLLIVNYR-GSLGFGEEALQSLPGK 646 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~~~~~~la-~~Gy~V~~~d~r-Gs~G~G~~~~~~~~~~ 646 (789)
+.|++.+. ++.|......++.|+||++|||+....... |. ...|+ +.|++|+.+||| |..|++........
T Consensus 95 ~edcl~ln--v~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~--~~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~-- 168 (542)
T 2h7c_A 95 SEDCLYLN--IYTPADLTKKNRLPVMVWIHGGGLMVGAASTYD--GLALAAHENVVVVTIQYRLGIWGFFSTGDEHSR-- 168 (542)
T ss_dssp ESCCCEEE--EEECSCTTSCCCEEEEEEECCSTTTSCCSTTSC--CHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC--
T ss_pred CCCCcEEE--EEECCCCCCCCCCCEEEEECCCcccCCCccccC--HHHHHhcCCEEEEecCCCCccccCCCCCcccCc--
Confidence 34665554 778876545578999999999886543332 22 22344 589999999999 65555543322223
Q ss_pred CCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHh--CCCceeEEEEeCCccch
Q 003886 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLCNL 708 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~--~p~~~~a~v~~~pv~~~ 708 (789)
+...+.|+.++++|+.++. ..|++||+|+|+|+||+++..++.. .+.+|+++|+.+|....
T Consensus 169 -~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 169 -GNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp -CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred -cchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 3334789999999998752 3799999999999999999998875 35799999999997654
No 299
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.21 E-value=1.6e-09 Score=116.27 Aligned_cols=249 Identities=8% Similarity=0.061 Sum_probs=144.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+...+|||||+.|++....+ .+.+| ..++...+..+. ...+.| ..+.|+|||+.|+..+.+
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~-~h~~~v------~~~~~~~~~~~l~~~~~d--- 73 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNH-----EVHIYEKSGNKWVQVHELK-EHNGQV------TGVDWAPDSNRIVTCGTD--- 73 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSS-----EEEEEEEETTEEEEEEEEE-CCSSCE------EEEEEETTTTEEEEEETT---
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----EEEEEeCCCCcEEeeeeec-CCCCcc------cEEEEeCCCCEEEEEcCC---
Confidence 3578899999999999875443 34555 344311222221 122222 789999999999876432
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEecc-CCCCCCccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~-~~~~~~~~~~~~wSPDg~~~~ 310 (789)
..|.+||+.+++..... -......+..+.|+|||+.
T Consensus 74 -----------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-- 110 (372)
T 1k8k_C 74 -----------------------------------------RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK-- 110 (372)
T ss_dssp -----------------------------------------SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSE--
T ss_pred -----------------------------------------CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCE--
Confidence 46889999888743221 0233446789999999987
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC----eeec-CCCCCccCcceecCCCCE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNL-TESISSAFFPRFSPDGKF 385 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~L-t~~~~~~~~p~~SpDG~~ 385 (789)
|+..+. ...|+++|+ ..+. ...+ ..+...+...+|+|||+.
T Consensus 111 --l~~~~~---------------d~~v~i~d~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 111 --FAVGSG---------------SRVISICYF-----------------EQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp --EEEEET---------------TSSEEEEEE-----------------ETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred --EEEEeC---------------CCEEEEEEe-----------------cCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 766652 235666666 2222 2233 334566888999999999
Q ss_pred EEEEecCCCCCCCCccccceeEEeecCCCCCCCccc--------ceeeEEeeeeccCCCCCccccccCCCCCccccCCCE
Q 003886 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE--------KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 457 (789)
Q Consensus 386 la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~--------~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~ 457 (789)
|+..+.+. .|++||+.......... .......... + ....+..+.|+||++.
T Consensus 157 l~~~~~dg-----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~v~~~~~~~~~~~ 216 (372)
T 1k8k_C 157 LAAGSCDF-----------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--------S-SCGWVHGVCFSANGSR 216 (372)
T ss_dssp EEEEETTS-----------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--------C-CSSCEEEEEECSSSSE
T ss_pred EEEEcCCC-----------CEEEEEcccccccccccccccccccchhhheEecC--------C-CCCeEEEEEECCCCCE
Confidence 88776543 48888865322110000 0000111000 0 0113456789999986
Q ss_pred EEEEEEeCCeEEEEEEECCCCcEEEecCC-CCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 458 MLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 458 l~~~~~~~~~~~l~~~dl~tg~~~~lt~~-~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
|+ ++..++. |..+|+.+++....... ...+....+++++..++ +. ... .+.+.++..
T Consensus 217 l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~---~i~i~~~~~ 274 (372)
T 1k8k_C 217 VA-WVSHDST--VCLADADKKMAVATLASETLPLLAVTFITESSLVA-AG-HDC---FPVLFTYDS 274 (372)
T ss_dssp EE-EEETTTE--EEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEE-EE-TTS---SCEEEEEET
T ss_pred EE-EEeCCCE--EEEEECCCCceeEEEccCCCCeEEEEEecCCCEEE-EE-eCC---eEEEEEccC
Confidence 64 4455554 55557767765544333 33455567888887544 33 222 255556544
No 300
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.21 E-value=6.1e-10 Score=131.06 Aligned_cols=278 Identities=13% Similarity=0.105 Sum_probs=155.7
Q ss_pred cceeEEEEEEeecCCCC----ccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecC
Q 003886 124 KRKKFMLSTVISKENEN----SVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVP 197 (789)
Q Consensus 124 ~~~~~l~~~~~~~~~~~----~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~ 197 (789)
...+.+.++++...... .+.++.+. ..+...+|||||++|+..+..+ .+.+|+ .+...+.+.
T Consensus 402 s~D~~i~~W~~~~~~~~~~~~~~~~~~h~-----~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~~~~~~~~~-- 469 (694)
T 3dm0_A 402 SRDKSIILWKLTKDDKAYGVAQRRLTGHS-----HFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAAGVSTRRFV-- 469 (694)
T ss_dssp ETTSEEEEEECCCSTTCSCEEEEEEECCS-----SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE--
T ss_pred eCCCcEEEEEccCCCcccccccceecCCC-----CcEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCcceeEEe--
Confidence 34456777776443221 12333333 4578899999999999876654 567773 343333332
Q ss_pred CCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCC---CCCCCcCCCCCCCcceeeCCcc--cccCCccC
Q 003886 198 QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTK---GGSSDKDCNSWKGQGDWEEDWG--ETYAGKRQ 272 (789)
Q Consensus 198 ~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~g--~~~~~~~~ 272 (789)
++.+.| ..+.|||||+.|+..+.+.... .|+..... .......+..+.....|.++.. ...++..+
T Consensus 470 -~h~~~v------~~~~~s~~~~~l~s~s~D~~i~--iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 540 (694)
T 3dm0_A 470 -GHTKDV------LSVAFSLDNRQIVSASRDRTIK--LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 540 (694)
T ss_dssp -CCSSCE------EEEEECTTSSCEEEEETTSCEE--EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred -CCCCCE------EEEEEeCCCCEEEEEeCCCEEE--EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC
Confidence 222223 7899999999999888776543 23321100 0011123444455566777642 23455567
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (789)
..|.+||+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 541 ~~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~----l~sg~---------------~Dg~i~iwd~---------- 590 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSL----CASGG---------------KDGVVLLWDL---------- 590 (694)
T ss_dssp SCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSBCEEEET----------
T ss_pred CeEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCE----EEEEe---------------CCCeEEEEEC----------
Confidence 88999999988765441 233446788999999997 76655 2336888887
Q ss_pred hhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCccc-ceeeEEeeee
Q 003886 353 ELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE-KIVDVIPVVQ 431 (789)
Q Consensus 353 ~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~-~~~~v~~~~~ 431 (789)
.+++..........+...+|||||..|+.... ..|.+||+.++....... ..........
T Consensus 591 -------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 651 (694)
T 3dm0_A 591 -------AEGKKLYSLEANSVIHALCFSPNRYWLCAATE------------HGIKIWDLESKSIVEDLKVDLKAEAEKAD 651 (694)
T ss_dssp -------TTTEEEECCBCSSCEEEEEECSSSSEEEEEET------------TEEEEEETTTTEEEEEECCCCC-------
T ss_pred -------CCCceEEEecCCCcEEEEEEcCCCcEEEEEcC------------CCEEEEECCCCCChhhhcccccccccccc
Confidence 34433222223445778899999987765442 248999988754321100 0000000000
Q ss_pred ccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003886 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (789)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~ 473 (789)
......... ....+..+.|+|||+.| +++..++...||.+
T Consensus 652 ~~~~~~~~~-~~~~~~~l~~spdg~~l-~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 652 NSGPAATKR-KVIYCTSLNWSADGSTL-FSGYTDGVIRVWGI 691 (694)
T ss_dssp ----------CCCCEEEEEECTTSSEE-EEEETTSEEEEEEC
T ss_pred ccccccCCc-eeEEeeeEEEcCCCCEE-EEEcCCCeEEEEec
Confidence 000000000 00012356799999965 56777777777754
No 301
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.21 E-value=1.3e-09 Score=116.42 Aligned_cols=272 Identities=11% Similarity=0.015 Sum_probs=155.9
Q ss_pred ccEEEEe-----CC-CCCeEEEEecCCCCCCeEEEEec--CCc-----eeEEEecCCCccccccCCCcccceeecCCCCE
Q 003886 155 GASAVVP-----SP-SGSKLLVVRNPENESPIQFELWS--QSQ-----LEKEFHVPQTVHGSVYADGWFEGISWNSDETL 221 (789)
Q Consensus 155 ~~~~~~~-----SP-dG~~la~~~~~~~~~~~~~~i~~--~~~-----~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~ 221 (789)
.+...+| +| ||+.|+..+.++ ...+|+ .++ ......+ .+..+.| ..+.|+||++.
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~-----~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~V------~~~~~~~~~~~ 90 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDK-----TVMIWKLYEEEQNGYFGIPHKAL-TGHNHFV------SDLALSQENCF 90 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTS-----CEEEEEECSSCCSSBSEEEEEEE-CCCSSCE------EEEEECSSTTE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCC-----EEEEEECCcCCcccccccccchh-ccCCCce------EEEEECCCCCE
Confidence 4677788 77 999998776543 345552 111 1111112 1222333 78999999999
Q ss_pred EEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCC-CCCCccceE
Q 003886 222 IAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGI-PKSLSVGQV 300 (789)
Q Consensus 222 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~-~~~~~~~~~ 300 (789)
|+..+.+...+ .|+............+........|.++....+++..+..|.+||+.+......... .....+..+
T Consensus 91 l~s~s~D~~v~--lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 91 AISSSWDKTLR--LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEEEETTSEEE--EEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEE
T ss_pred EEEEcCCCcEE--EEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeee
Confidence 98877665433 344332222223334555555677888866666677788999999985544433111 223356788
Q ss_pred EEeeCCCCC------ccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCcc
Q 003886 301 VWAPLNEGL------HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSA 374 (789)
Q Consensus 301 ~wSPDg~~~------~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~ 374 (789)
.|+|+++.. ...|+..+ .+..|.++|. .......+..+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~---------------~d~~i~iwd~-----------------~~~~~~~~~~h~~~v 216 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVG---------------WDGRLKVWNT-----------------NFQIRYTFKAHESNV 216 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEE---------------TTSEEEEEET-----------------TTEEEEEEECCSSCE
T ss_pred eeccccccccccCCCCCEEEEEc---------------CCCEEEEEcC-----------------CCceeEEEcCccccc
Confidence 999998420 00144333 2235777775 444445566666778
Q ss_pred CcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC
Q 003886 375 FFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (789)
Q Consensus 375 ~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (789)
...+|||||++|+..+.+. .|.+||+............ ...+..+.|+||
T Consensus 217 ~~~~~s~~g~~l~sgs~dg-----------~v~iwd~~~~~~~~~~~~~-------------------~~~v~~v~~sp~ 266 (343)
T 2xzm_R 217 NHLSISPNGKYIATGGKDK-----------KLLIWDILNLTYPQREFDA-------------------GSTINQIAFNPK 266 (343)
T ss_dssp EEEEECTTSSEEEEEETTC-----------EEEEEESSCCSSCSEEEEC-------------------SSCEEEEEECSS
T ss_pred eEEEECCCCCEEEEEcCCC-----------eEEEEECCCCcccceeecC-------------------CCcEEEEEECCC
Confidence 8899999999998777543 5899998443221110000 012346789999
Q ss_pred CCEEEEEEEeCCeEEEEEEECCCCcEE---EecC----------C-CCCceeEEeeecCCEEEEEE
Q 003886 455 GCTMLLSSIWGSSQVIISVNVSSGELL---RITP----------A-ESNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 455 g~~l~~~~~~~~~~~l~~~dl~tg~~~---~lt~----------~-~~~~~~~~~s~dg~~l~~~~ 506 (789)
++.+. .+ .++. +..+|+.+++.. .+.. . ........|+++|+.|+...
T Consensus 267 ~~~la-~~-~d~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 267 LQWVA-VG-TDQG--VKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp SCEEE-EE-ESSC--EEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CCEEE-EE-CCCC--EEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 97553 33 3444 444566555432 2221 1 11234457888888766544
No 302
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=2.9e-09 Score=114.47 Aligned_cols=247 Identities=12% Similarity=0.109 Sum_probs=147.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCC--CCEEEEEeecC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEP 229 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpD--g~~la~~~~~~ 229 (789)
..+...+|||||++||.....+ .+.+|+ .+....+..+. ...+.| ..+.|+|+ ++.|+..+.+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~-~h~~~v------~~~~~~~~~~~~~l~s~~~d- 78 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDK-----TIKIFEVEGETHKLIDTLT-GHEGPV------WRVDWAHPKFGTILASCSYD- 78 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTS-----CEEEEEEETTEEEEEEEEC-CCSSCE------EEEEECCGGGCSEEEEEETT-
T ss_pred ccEEEEEEcCCCCEEEEEECCC-----cEEEEecCCCcceeeeEec-CCCCcE------EEEEeCCCCCCCEEEEeccC-
Confidence 4588999999999999876543 345552 22222222221 222333 78999988 8888776443
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccC-CCCCCccceEEEeeC--C
Q 003886 230 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPL--N 306 (789)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~-~~~~~~~~~~~wSPD--g 306 (789)
..|.+||+.+++...+.. ......+..+.|+|+ +
T Consensus 79 -------------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 115 (379)
T 3jrp_A 79 -------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 115 (379)
T ss_dssp -------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred -------------------------------------------CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC
Confidence 568899999886322210 233456789999999 7
Q ss_pred CCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecC-----
Q 003886 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP----- 381 (789)
Q Consensus 307 ~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp----- 381 (789)
+. |+..+ ....|.++|+... .......+..+...+..+.|+|
T Consensus 116 ~~----l~~~~---------------~d~~i~v~d~~~~--------------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 116 PL----LLVAS---------------SDGKVSVVEFKEN--------------GTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp SE----EEEEE---------------TTSEEEEEECCTT--------------SCCCEEEEECCTTCEEEEEECCCC---
T ss_pred CE----EEEec---------------CCCcEEEEecCCC--------------CceeeEEecCCCCceEEEEEcCccccc
Confidence 76 66655 2336788887210 1123344556666788999999
Q ss_pred --------CCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcccc
Q 003886 382 --------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 453 (789)
Q Consensus 382 --------DG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~ 453 (789)
||+.|+..+.+. .|++||+.++.... ........ ....+..+.|+|
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~------~~~~~~~~---------h~~~v~~~~~sp 216 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLEG---------HSDWVRDVAWSP 216 (379)
T ss_dssp -------CTTCEEEEEETTS-----------CEEEEEEETTTTEE------EEEEEECC---------CSSCEEEEEECC
T ss_pred cccccCCCCCCEEEEEeCCC-----------eEEEEEecCCCcce------eeEEEEec---------ccCcEeEEEECC
Confidence 799888777543 58899987644310 01111100 011345678999
Q ss_pred CC--CEEEEEEEeCCeEEEEEEECCCCc---EEEecC---CCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 454 DG--CTMLLSSIWGSSQVIISVNVSSGE---LLRITP---AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 454 Dg--~~l~~~~~~~~~~~l~~~dl~tg~---~~~lt~---~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
|+ ..+++++..++...+|.++ +++ ...+.. ....+....|+++++.|+....+ . .+.+.++.
T Consensus 217 ~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-g---~i~iw~~~ 286 (379)
T 3jrp_A 217 TVLLRSYLASVSQDRTCIIWTQD--NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD-N---KVTLWKEN 286 (379)
T ss_dssp CCSSSEEEEEEETTSCEEEEEES--STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS-S---SEEEEEEE
T ss_pred CCCCCCeEEEEeCCCEEEEEeCC--CCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC-C---cEEEEeCC
Confidence 93 3466677777776676554 442 233322 22234556889999877665542 2 25555544
No 303
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.20 E-value=1.9e-09 Score=117.42 Aligned_cols=248 Identities=12% Similarity=0.059 Sum_probs=141.8
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
.++|||+.++... ..+.+.++++... .....+.... ..+...+|+|||++|+..+..+ ..
T Consensus 130 ~~s~dg~~l~s~~---------~d~~i~iwd~~~~-~~~~~~~~h~-----~~v~~~~~~p~~~~l~s~s~d~-----~v 189 (393)
T 1erj_A 130 CFSPDGKFLATGA---------EDRLIRIWDIENR-KIVMILQGHE-----QDIYSLDYFPSGDKLVSGSGDR-----TV 189 (393)
T ss_dssp EECTTSSEEEEEE---------TTSCEEEEETTTT-EEEEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----EE
T ss_pred EECCCCCEEEEEc---------CCCeEEEEECCCC-cEEEEEccCC-----CCEEEEEEcCCCCEEEEecCCC-----cE
Confidence 4579999886532 2345666665321 1112222222 4588899999999998876554 56
Q ss_pred EEec--CCceeEEEecCCCccccccCCCcccceeecC-CCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCccee
Q 003886 183 ELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (789)
Q Consensus 183 ~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (789)
.+|+ .++....+.....+ ..+.|+| ||+.|+..+.+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~l~~~s~d------------------------------- 228 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSIEDGV----------TTVAVSPGDGKYIAAGSLD------------------------------- 228 (393)
T ss_dssp EEEETTTTEEEEEEECSSCE----------EEEEECSTTCCEEEEEETT-------------------------------
T ss_pred EEEECCCCeeEEEEEcCCCc----------EEEEEECCCCCEEEEEcCC-------------------------------
Confidence 6773 44444433332222 6899999 89888876443
Q ss_pred eCCcccccCCccCceEEEEEccCCceEe-ccC-----CCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccC
Q 003886 260 EEDWGETYAGKRQPSLFVININSGEVQA-VKG-----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 333 (789)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~~~~-l~~-----~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~ 333 (789)
..|.+||+.+++... +.. ......+..++|+|||+. |+..+.
T Consensus 229 -------------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~----l~s~s~--------------- 276 (393)
T 1erj_A 229 -------------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS----VVSGSL--------------- 276 (393)
T ss_dssp -------------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE----EEEEET---------------
T ss_pred -------------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE----EEEEeC---------------
Confidence 468888988876543 210 112335778999999997 665542
Q ss_pred CcceEEEecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecC
Q 003886 334 PCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (789)
Q Consensus 334 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~ 412 (789)
+..|.++|+....... .......+ ....+..+...+...+|+|||++|+..+.+. .|++||+.
T Consensus 277 d~~v~~wd~~~~~~~~-----~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----------~v~iwd~~ 340 (393)
T 1erj_A 277 DRSVKLWNLQNANNKS-----DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-----------GVLFWDKK 340 (393)
T ss_dssp TSEEEEEEC--------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-----------EEEEEETT
T ss_pred CCEEEEEECCCCCCcc-----cccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC-----------eEEEEECC
Confidence 2356677763110000 00000111 1234455666678899999999988766443 58999988
Q ss_pred CCCCCCccccee-eEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003886 413 TNGNFSSLEKIV-DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (789)
Q Consensus 413 ~~~~~~~t~~~~-~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~d 474 (789)
++.......+.. .+..+.. .....|+|+++ +++++..++...||.+.
T Consensus 341 ~~~~~~~l~~h~~~v~~v~~--------------~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 341 SGNPLLMLQGHRNSVISVAV--------------ANGSSLGPEYN-VFATGSGDCKARIWKYK 388 (393)
T ss_dssp TCCEEEEEECCSSCEEEEEE--------------CSSCTTCTTCE-EEEEEETTSEEEEEEEE
T ss_pred CCeEEEEECCCCCCEEEEEe--------------cCCcCcCCCCC-EEEEECCCCcEEECccc
Confidence 765422111111 1111000 01224566776 55777888888888765
No 304
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.20 E-value=1.9e-09 Score=114.66 Aligned_cols=113 Identities=12% Similarity=0.065 Sum_probs=65.8
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCc--cccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTV--HGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~--~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
....++|||||+++++.... ..+++.++ .+++....+...... ++. ....+.|||||++|++...+...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~t~~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~~~ 115 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNH---YGDIYGIDLDTCKNTFHANLSSVPGEVGR-----SMYSFAISPDGKEVYATVNPTQR 115 (349)
T ss_dssp SSCEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEESCCSTTEEEE-----CSSCEEECTTSSEEEEEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCC---CCcEEEEeCCCCcEEEEEEcccccccccc-----cccceEECCCCCEEEEEcccccc
Confidence 36688999999988776532 23566666 456555555542210 000 11688999999999887654110
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEecc-CCCCCCccceEEEeeCCC
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNE 307 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~-~~~~~~~~~~~~wSPDg~ 307 (789)
.. ..| ......|++||+++++..... .......+..++|+|||+
T Consensus 116 ~~-----------------------~~~---------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 116 LN-----------------------DHY---------VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp CS-----------------------SCE---------EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred cc-----------------------ccc---------ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 00 000 002368999999886543221 011223466788999997
No 305
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.20 E-value=1.8e-10 Score=120.70 Aligned_cols=235 Identities=9% Similarity=0.014 Sum_probs=143.1
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
..+|||+.++-.. ..+.+.++++.+ +.....+.... ..+...+|+|||++|+..+... .+
T Consensus 20 ~fsp~~~~l~s~~---------~dg~v~lWd~~~-~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~s~d~-----~i 79 (304)
T 2ynn_A 20 DFHPTEPWVLTTL---------YSGRVELWNYET-QVEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDF-----RI 79 (304)
T ss_dssp EECSSSSEEEEEE---------TTSEEEEEETTT-TEEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTS-----EE
T ss_pred EECCCCCEEEEEc---------CCCcEEEEECCC-CceeEEeeccC-----CcEEEEEEeCCCCEEEEECCCC-----EE
Confidence 3468998776432 234566666532 22222333222 3477889999999999877654 56
Q ss_pred EEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCC-CCCCCCcCCCCCCCccee
Q 003886 183 ELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQGDW 259 (789)
Q Consensus 183 ~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 259 (789)
.+|+ .++....+.. ..+.| ..++|+||++.|+..+.+.... .|+.... ........+........|
T Consensus 80 ~vwd~~~~~~~~~~~~---h~~~v------~~~~~~~~~~~l~sgs~D~~v~--lWd~~~~~~~~~~~~~h~~~v~~v~~ 148 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEA---HPDYI------RSIAVHPTKPYVLSGSDDLTVK--LWNWENNWALEQTFEGHEHFVMCVAF 148 (304)
T ss_dssp EEEETTTCCEEEEEEC---CSSCE------EEEEECSSSSEEEEEETTSCEE--EEEGGGTTEEEEEECCCCSCEEEEEE
T ss_pred EEEECCCCcEEEEEeC---CCCcE------EEEEEcCCCCEEEEECCCCeEE--EEECCCCcchhhhhcccCCcEEEEEE
Confidence 6773 4444333321 22223 7899999999999887776543 3332111 111122334444455667
Q ss_pred eCCcc-cccCCccCceEEEEEccCCceE-eccCCCCCCccceEEEee--CCCCCccEEEEEeecCCceeeeeeeeccCCc
Q 003886 260 EEDWG-ETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAP--LNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (789)
Q Consensus 260 ~~d~g-~~~~~~~~~~l~v~d~~~g~~~-~l~~~~~~~~~~~~~wSP--Dg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~ 335 (789)
.|+-+ ...++..+..|.+||+.+++.. .+. ......+..+.|+| |++. |+..+ .+.
T Consensus 149 ~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~----l~s~s---------------~D~ 208 (304)
T 2ynn_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPY----MITAS---------------DDL 208 (304)
T ss_dssp CTTCTTEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCE----EEEEE---------------TTS
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCE----EEEEc---------------CCC
Confidence 77433 3455666789999999776532 221 22233556778887 5554 55444 233
Q ss_pred ceEEEecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 336 ALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 336 ~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
.|.++|+ .++ ....+..+...+....|+|+|+.|+..+.+. .|.+||..++
T Consensus 209 ~i~iWd~-----------------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg-----------~i~iWd~~~~ 260 (304)
T 2ynn_A 209 TIKIWDY-----------------QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG-----------TLKIWNSSTY 260 (304)
T ss_dssp EEEEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS-----------CEEEEETTTC
T ss_pred eEEEEeC-----------------CCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC-----------eEEEEECCCC
Confidence 6888887 333 3556777777788899999999888777553 5899998775
Q ss_pred CC
Q 003886 415 GN 416 (789)
Q Consensus 415 ~~ 416 (789)
+.
T Consensus 261 ~~ 262 (304)
T 2ynn_A 261 KV 262 (304)
T ss_dssp CE
T ss_pred ce
Confidence 43
No 306
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.20 E-value=3.2e-08 Score=106.60 Aligned_cols=258 Identities=10% Similarity=0.027 Sum_probs=142.3
Q ss_pred EEEeCCCCCeEEEEecC------CCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 158 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 158 ~~~~SPdG~~la~~~~~------~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
.+++||||++|++.... +.....+..++ ...+....+.+....+.. ....-..+.|||||++|++.....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~--~g~~p~~~~~spDG~~l~v~n~~~- 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFD--VGPYSWMNANTPNNADLLFFQFAA- 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccc--cCCCccceEECCCCCEEEEEecCC-
Confidence 88999999999876531 11123455555 445555555443110000 000114789999999988764321
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCCCC
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGL 309 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~~~ 309 (789)
...|.++| +++++... ...+ +.+...|+++.
T Consensus 147 -----------------------------------------~~~v~viD-~t~~~~~~~i~~~-----~~~~~~~~~~~- 178 (373)
T 2mad_H 147 -----------------------------------------GPAVGLVV-QGGSSDDQLLSSP-----TCYHIHPGAPS- 178 (373)
T ss_pred -----------------------------------------CCeEEEEE-CCCCEEeEEcCCC-----ceEEEEeCCCc-
Confidence 25799999 99886533 2122 12556788876
Q ss_pred ccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec------CCCCCccCcceecCCC
Q 003886 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL------TESISSAFFPRFSPDG 383 (789)
Q Consensus 310 ~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L------t~~~~~~~~p~~SpDG 383 (789)
.++.... ...+..++. . +...... .........|.+++|+
T Consensus 179 ---~~~~~~~--------------dg~~~~vd~-~----------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 179 ---TFYLLCA--------------QGGLAKTDH-A----------------GGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred ---eEEEEcC--------------CCCEEEEEC-C----------------CcEEEEEeccccccCCcceeecceeEecC
Confidence 5443321 124555554 1 1111011 1111123457889999
Q ss_pred CEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeecc-CC-CCCccccccCCCCCccccCCCEEEEE
Q 003886 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA-EG-DCFPGLYSSSILSNPWLSDGCTMLLS 461 (789)
Q Consensus 384 ~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~-~~-~~f~g~~~~~~~~~~ws~Dg~~l~~~ 461 (789)
..++|.+.. .+++++|+.++....+. . ..+.... .. ...|+ ....+.+++|++++|+.
T Consensus 225 ~~~~~~~~~-----------~~v~vid~~~~~~~v~~-~----~~~~~~~~~~~~~~p~----g~~~~~~s~d~~~lyV~ 284 (373)
T 2mad_H 225 GRIVWPVYS-----------GKILQADISAAGATNKA-P----IDALSGGRKADTWRPG----GWQQVAYLKSSDGIYLL 284 (373)
T ss_pred CEEEEEcCC-----------ceEEEEeccCCcceEee-e----eeecCCcccccceecC----ceEeEEECCCCCEEEEE
Confidence 998888732 26999998765432111 0 0000000 00 00110 11125678999999887
Q ss_pred EEeC-------CeEEEEEEECCCCcE-EEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 462 SIWG-------SSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 462 ~~~~-------~~~~l~~~dl~tg~~-~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
.... ....|+.+|++++++ .++.-.. ......+++||+.++|+..... ..+.++|..+.
T Consensus 285 ~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~--~~V~ViD~~t~ 351 (373)
T 2mad_H 285 TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGT--EVLHIYDAGAG 351 (373)
T ss_pred eccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCC--CeEEEEECCCC
Confidence 6432 235799999999887 4554333 3445689999996666654222 35888887654
No 307
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.18 E-value=8.5e-10 Score=120.50 Aligned_cols=183 Identities=13% Similarity=0.127 Sum_probs=113.3
Q ss_pred ceEEEEEccCCc--------eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEeccc
Q 003886 273 PSLFVININSGE--------VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 344 (789)
Q Consensus 273 ~~l~v~d~~~g~--------~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 344 (789)
..|.+||+.++. ...+ ......+..+.|+|||+. +++++. .+..|+++|+
T Consensus 104 g~v~vw~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~----~l~s~~--------------~dg~i~iwd~-- 161 (402)
T 2aq5_A 104 CTVMVWEIPDGGLVLPLREPVITL--EGHTKRVGIVAWHPTAQN----VLLSAG--------------CDNVILVWDV-- 161 (402)
T ss_dssp SEEEEEECCTTCCSSCBCSCSEEE--ECCSSCEEEEEECSSBTT----EEEEEE--------------TTSCEEEEET--
T ss_pred CeEEEEEccCCCCccccCCceEEe--cCCCCeEEEEEECcCCCC----EEEEEc--------------CCCEEEEEEC--
Confidence 568889988763 2333 223446788999999976 666653 2236888898
Q ss_pred ccchhhhhhhhcCCCCCCC-eeec--CCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCccc
Q 003886 345 YKSEASELELKESSSEDLP-VVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 421 (789)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~-~~~L--t~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~ 421 (789)
.+++ ...+ ..+...+...+|+|||+.|+..+.+. .|++||+.++....
T Consensus 162 ---------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~iwd~~~~~~~~--- 212 (402)
T 2aq5_A 162 ---------------GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK-----------RVRVIEPRKGTVVA--- 212 (402)
T ss_dssp ---------------TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS-----------EEEEEETTTTEEEE---
T ss_pred ---------------CCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC-----------cEEEEeCCCCceee---
Confidence 3333 4455 55667788999999999998877543 59999987744321
Q ss_pred ceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcE--EEec-CCCCCceeEEeeec
Q 003886 422 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL--LRIT-PAESNFSWSLLTLD 498 (789)
Q Consensus 422 ~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~--~~lt-~~~~~~~~~~~s~d 498 (789)
. ....... ..+..+.|+|||+.|+..........|..+|+.+++. .... ..........++++
T Consensus 213 ------~-~~~~~~~-------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 213 ------E-KDRPHEG-------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp ------E-EECSSCS-------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred ------e-eccCCCC-------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 0 0000000 1135678999987554332223455677778877553 2222 22233455688999
Q ss_pred CCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 499 GDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 499 g~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
++.++.+.+... .|.+.++..+
T Consensus 279 ~~~l~~~g~~dg---~i~i~d~~~~ 300 (402)
T 2aq5_A 279 TNIVYLCGKGDS---SIRYFEITSE 300 (402)
T ss_dssp TTEEEEEETTCS---CEEEEEECSS
T ss_pred CCEEEEEEcCCC---eEEEEEecCC
Confidence 998877765443 3777776543
No 308
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.18 E-value=3.3e-10 Score=123.07 Aligned_cols=284 Identities=10% Similarity=0.020 Sum_probs=156.5
Q ss_pred ceeEEEEEEeecCCC-----CccceeecCCcceecccEEEEeCCC----C---CeEEEEecCCCCCCeEEEEecCCce--
Q 003886 125 RKKFMLSTVISKENE-----NSVTFQWAPFPVEMTGASAVVPSPS----G---SKLLVVRNPENESPIQFELWSQSQL-- 190 (789)
Q Consensus 125 ~~~~l~~~~~~~~~~-----~~~~lt~~~~~~~~~~~~~~~~SPd----G---~~la~~~~~~~~~~~~~~i~~~~~~-- 190 (789)
..+.+.++++..... ....+.... ..+....|+|+ | +.|+.....+ .-.+|.+. .++.
T Consensus 34 ~dg~i~iw~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~g~~~~~l~s~~~dg--~i~iw~~~-~~~~~~ 105 (397)
T 1sq9_A 34 GDGYLKVWDNKLLDNENPKDKSYSHFVHK-----SGLHHVDVLQAIERDAFELCLVATTSFSG--DLLFYRIT-REDETK 105 (397)
T ss_dssp TTSEEEEEESBCCTTCCGGGGEEEEECCT-----TCEEEEEEEEEEETTTEEEEEEEEEETTS--CEEEEEEE-ECTTTC
T ss_pred CCCEEEEEECCCcccccCCCcceEEecCC-----CcEEEEEEecccccCCccccEEEEEcCCC--CEEEEEcc-CCcccc
Confidence 345677777644321 112222222 45788999999 9 9988876543 22233332 2332
Q ss_pred ---eEEEecCCCc--cccccCCCcccceeec----CCCCE-EEEEeecCCCCCCCccCCC------CCCCC-----CC--
Q 003886 191 ---EKEFHVPQTV--HGSVYADGWFEGISWN----SDETL-IAYVAEEPSPSKPTFSLGS------TKGGS-----SD-- 247 (789)
Q Consensus 191 ---~~~~~~~~~~--~g~v~~d~~~~~~~wS----pDg~~-la~~~~~~~~~~~~~~~~~------~~~~~-----~~-- 247 (789)
.+.+...... .+.| ..+.|+ ||++. |+..+.+.... .|+... ..... ..
T Consensus 106 ~~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~~~~l~~~~~dg~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~ 177 (397)
T 1sq9_A 106 KVIFEKLDLLDSDMKKHSF------WALKWGASNDRLLSHRLVATDVKGTTY--IWKFHPFADESNSLTLNWSPTLELQG 177 (397)
T ss_dssp CEEEEEECCSCTTGGGSCE------EEEEEECCC----CEEEEEEETTSCEE--EEEEESSSSHHHHTTTCCCCEEEEEE
T ss_pred cccceeecccccccCCCcE------EEEEEeeccCCCCceEEEEEeCCCcEE--EEeCCccccccccceeeccCcceeee
Confidence 2222211000 1233 789999 99999 87776654322 233222 11111 11
Q ss_pred -----cCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCC-------CCccceEEEeeCCCCCccEEEE
Q 003886 248 -----KDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-------SLSVGQVVWAPLNEGLHQYLVF 315 (789)
Q Consensus 248 -----~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~-------~~~~~~~~wSPDg~~~~~~l~f 315 (789)
..+........|.++. ..+++..+..|.+||+.+++.... ... ...+..++|+|||+. |+.
T Consensus 178 ~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~h~~~~~~i~~i~~~~~~~~----l~~ 250 (397)
T 1sq9_A 178 TVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYN--FESQHSMINNSNSIRSVKFSPQGSL----LAI 250 (397)
T ss_dssp EECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEE--EECCC---CCCCCEEEEEECSSTTE----EEE
T ss_pred eeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEE--EeccccccccCCccceEEECCCCCE----EEE
Confidence 1234445566788886 666666788999999998876544 222 556789999999997 766
Q ss_pred EeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCC-------------CCCccCcceecCC
Q 003886 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-------------SISSAFFPRFSPD 382 (789)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-------------~~~~~~~p~~SpD 382 (789)
.+... ....|+++|+. .......+.. +...+....|+||
T Consensus 251 ~~~d~------------~~g~i~i~d~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 251 AHDSN------------SFGCITLYETE----------------FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp EEEET------------TEEEEEEEETT----------------TCCEEEEECBC--------CCBSBSSCEEEEEECSS
T ss_pred EecCC------------CCceEEEEECC----------------CCcccceeccCcccccccccccccCCcEEEEEECCC
Confidence 55210 01368888872 2223444544 5567888999999
Q ss_pred CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCcc------ccccCCCCCccccCCC
Q 003886 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG------LYSSSILSNPWLSDGC 456 (789)
Q Consensus 383 G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g------~~~~~~~~~~ws~Dg~ 456 (789)
|++|+..+.+ ..|++||+.+++........ .... ....+ ...| +....+..+.|+|||+
T Consensus 303 ~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~--~~~~-~~~~~-~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 303 GETLCSAGWD-----------GKLRFWDVKTKERITTLNMH--CDDI-EIEED-ILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp SSEEEEEETT-----------SEEEEEETTTTEEEEEEECC--GGGC-SSGGG-CCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred CCEEEEEeCC-----------CeEEEEEcCCCceeEEEecc--cCcc-cchhh-hhccccccccccCCceeEEEeccccc
Confidence 9998877644 26999998775432110000 0000 00000 0000 0022456788999984
Q ss_pred ---------EEEEEEEeCCeEEEEEEE
Q 003886 457 ---------TMLLSSIWGSSQVIISVN 474 (789)
Q Consensus 457 ---------~l~~~~~~~~~~~l~~~d 474 (789)
.+++++..++...+|.++
T Consensus 368 ~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 368 RSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp SBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred cccccccccceEEEecCCCcEEEEEcC
Confidence 366777777777777654
No 309
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.18 E-value=2.4e-09 Score=111.69 Aligned_cols=237 Identities=12% Similarity=0.164 Sum_probs=138.3
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec-CC---ceeEEEecCCCccccccCCCcccceeecCC--CCEEEEEee
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-QS---QLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAE 227 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~-~~---~~~~~~~~~~~~~g~v~~d~~~~~~~wSpD--g~~la~~~~ 227 (789)
..+...+|||||++||..+.++ ...+|+ .+ +....+. +..+.| ..+.|+|+ |+.||..+.
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~-----~v~iw~~~~~~~~~~~~l~---gH~~~V------~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDK-----TIKIFEVEGETHKLIDTLT---GHEGPV------WRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEEBCSSCBCCCEEEC---CCSSCE------EEEEECCGGGCSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEecCCCCcEEEEEEc---cccCCe------EEEEecCCCcCCEEEEEcC
Confidence 3578899999999999877553 355662 21 2222221 222333 78999874 888877654
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccC-CCCCCccceEEEeeC-
Q 003886 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPL- 305 (789)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~-~~~~~~~~~~~wSPD- 305 (789)
+ ..|.+||+.+++...+.. ......+..++|+|+
T Consensus 76 D--------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 111 (297)
T 2pm7_B 76 D--------------------------------------------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE 111 (297)
T ss_dssp T--------------------------------------------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG
T ss_pred C--------------------------------------------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC
Confidence 3 568899998875322210 223446789999998
Q ss_pred -CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCC--
Q 003886 306 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPD-- 382 (789)
Q Consensus 306 -g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpD-- 382 (789)
|+. |+..+ .+..|.++|+... .......+..+...+...+|+|+
T Consensus 112 ~g~~----l~s~s---------------~d~~v~~wd~~~~--------------~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 112 YGPM----LLVAS---------------SDGKVSVVEFKEN--------------GTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp GCSE----EEEEE---------------TTSEEEEEEBCSS--------------SCBCCEEEECCSSCEEEEEECCCC-
T ss_pred CCcE----EEEEE---------------CCCcEEEEEecCC--------------CceeeeeeecccCccceEeecCCcc
Confidence 665 55544 2235777777210 01113345556666788899997
Q ss_pred -----------CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcc
Q 003886 383 -----------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 451 (789)
Q Consensus 383 -----------G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~w 451 (789)
|+.|+..+.+. .|.+||+.++.... ....... | ....+..+.|
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~-----------~v~lwd~~~~~~~~------~~~~~l~--------~-H~~~V~~v~~ 212 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLE--------G-HSDWVRDVAW 212 (297)
T ss_dssp -----------CCEEEEEETTS-----------CEEEEEEETTTTEE------EEEEEEC--------C-CSSCEEEEEE
T ss_pred cccccCCCCCCcceEEEEcCCC-----------cEEEEEEcCCCceE------EEEEEec--------C-CCCceEEEEE
Confidence 56777666443 48888886644210 0010000 0 1113456789
Q ss_pred ccCC--CEEEEEEEeCCeEEEEEEECCCCcE-EEec--CC-CCCceeEEeeecCCEEEEEEe
Q 003886 452 LSDG--CTMLLSSIWGSSQVIISVNVSSGEL-LRIT--PA-ESNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 452 s~Dg--~~l~~~~~~~~~~~l~~~dl~tg~~-~~lt--~~-~~~~~~~~~s~dg~~l~~~~s 507 (789)
+|++ ..+++++..++...||.++...+.. ..+. .. ...+....|+++|+.|+....
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 9996 4566777888888888665432322 2222 11 223444678999887765544
No 310
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.16 E-value=3.9e-10 Score=122.27 Aligned_cols=121 Identities=16% Similarity=0.202 Sum_probs=94.2
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHC---------CcEEEEEcCCCCCCCCchhhc
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV---------GYSLLIVNYRGSLGFGEEALQ 641 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~---------Gy~V~~~d~rGs~G~G~~~~~ 641 (789)
-+|..++...+.+. ....|.||++||.+++ ...|......|++. ||.|+++|++| +|.+...
T Consensus 75 i~g~~i~~~~~~~~----~~~~~plll~HG~~~s--~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G---~G~S~~~ 145 (388)
T 4i19_A 75 IDGATIHFLHVRSP----EPDATPMVITHGWPGT--PVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPG---FGLSGPL 145 (388)
T ss_dssp ETTEEEEEEEECCS----STTCEEEEEECCTTCC--GGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTT---SGGGCCC
T ss_pred ECCeEEEEEEccCC----CCCCCeEEEECCCCCC--HHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCC---CCCCCCC
Confidence 37889987777653 3356789999998875 56777778888776 99999999998 6655422
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 642 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 642 ~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
.. ....++++.+.+..++++ ++.+++.++|||+||++++.++.++|++++++|+.+|..
T Consensus 146 ~~----~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 146 KS----AGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp SS----CCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred CC----CCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 11 133577888877777776 455789999999999999999999999999999998643
No 311
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.16 E-value=6.1e-08 Score=105.12 Aligned_cols=259 Identities=13% Similarity=0.078 Sum_probs=142.9
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCC---CEEEEEee
Q 003886 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDE---TLIAYVAE 227 (789)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg---~~la~~~~ 227 (789)
..+...+|+| +++.|+.....+ .+.+| ..++........... ..+.|+|++ ..|+....
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 164 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDK-----TLKVWDTNTLQTADVFNFEETV----------YSHHMSPVSTKHCLVAVGTR 164 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTS-----EEEEEETTTTEEEEEEECSSCE----------EEEEECSSCSSCCEEEEEES
T ss_pred CcEEEEEEccCCCcEEEEEeCCC-----eEEEeeCCCCccceeccCCCce----------eeeEeecCCCCCcEEEEEcC
Confidence 4588899999 666777665443 46667 345555555443333 677888854 36665432
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003886 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (789)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (789)
...|.+||+.+++..... ......+..++|+|+++
T Consensus 165 --------------------------------------------~~~v~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 165 --------------------------------------------GPKVQLCDLKSGSCSHIL-QGHRQEILAVSWSPRYD 199 (408)
T ss_dssp --------------------------------------------SSSEEEEESSSSCCCEEE-CCCCSCEEEEEECSSCT
T ss_pred --------------------------------------------CCeEEEEeCCCcceeeee-cCCCCcEEEEEECCCCC
Confidence 256899999887654331 23344678899999999
Q ss_pred CCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEE
Q 003886 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 387 (789)
Q Consensus 308 ~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la 387 (789)
. +++++.. ...|+++|+......-.................+..+...+...+|+|||++|+
T Consensus 200 ~----ll~~~~~--------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 261 (408)
T 4a11_B 200 Y----ILATASA--------------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL 261 (408)
T ss_dssp T----EEEEEET--------------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEE
T ss_pred c----EEEEEcC--------------CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEE
Confidence 8 7777632 235777776311000000000000000001111234455678899999999998
Q ss_pred EEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccc-cCCCEEEEEEEeCC
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGS 466 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws-~Dg~~l~~~~~~~~ 466 (789)
..+.+. .|.+||+.++........... . ... ......+. ..+..+++. ..++
T Consensus 262 ~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~--~-------~~~------~~~~~~~~~~~~~~~~~~-~~~~ 314 (408)
T 4a11_B 262 TVGTDN-----------RMRLWNSSNGENTLVNYGKVC--N-------NSK------KGLKFTVSCGCSSEFVFV-PYGS 314 (408)
T ss_dssp EEETTS-----------CEEEEETTTCCBCCCCCCCCC--C-------CCS------SCCCCEECCSSSSCEEEE-EETT
T ss_pred EecCCC-----------eEEEEECCCCccceecccccc--c-------ccc------ccceeEEecCCCceEEEE-ecCC
Confidence 777543 599999987665322111100 0 000 00111222 223334444 3444
Q ss_pred eEEEEEEECCCCcEEEecCCC-CCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 467 SQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 467 ~~~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
.|..+|+.+++.......+ ..+....|+++++.|+.... .. .|.+.++...
T Consensus 315 --~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg---~i~iw~~~~~ 366 (408)
T 4a11_B 315 --TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSR-DC---NILAWVPSLY 366 (408)
T ss_dssp --EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEET-TS---CEEEEEECC-
T ss_pred --EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECC-CC---eEEEEeCCCC
Confidence 5666788888776655433 34555688999887664443 32 3666776543
No 312
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.15 E-value=3.6e-09 Score=115.45 Aligned_cols=238 Identities=12% Similarity=0.100 Sum_probs=150.7
Q ss_pred EEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCC
Q 003886 157 SAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (789)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~ 234 (789)
....||+ +.++.....+ .+.+| ..++..+..... ..+.| ..++|+|||+.|+..+.+
T Consensus 97 ~~~~~s~--~~l~~~~~d~-----~v~lw~~~~~~~~~~~~~~--~~~~v------~~v~~s~~~~~l~~~~~d------ 155 (401)
T 4aez_A 97 NLLDWSN--LNVVAVALER-----NVYVWNADSGSVSALAETD--ESTYV------ASVKWSHDGSFLSVGLGN------ 155 (401)
T ss_dssp BCEEECT--TSEEEEEETT-----EEEEEETTTCCEEEEEECC--TTCCE------EEEEECTTSSEEEEEETT------
T ss_pred EEEeecC--CCEEEEECCC-----eEEEeeCCCCcEeEeeecC--CCCCE------EEEEECCCCCEEEEECCC------
Confidence 3466775 4455554433 35566 455555555442 11222 789999999998886432
Q ss_pred CccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003886 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (789)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~ 314 (789)
..|.+||+.+++..... ......+..+.| +++. |+
T Consensus 156 --------------------------------------g~i~iwd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~ 190 (401)
T 4aez_A 156 --------------------------------------GLVDIYDVESQTKLRTM-AGHQARVGCLSW--NRHV----LS 190 (401)
T ss_dssp --------------------------------------SCEEEEETTTCCEEEEE-CCCSSCEEEEEE--ETTE----EE
T ss_pred --------------------------------------CeEEEEECcCCeEEEEe-cCCCCceEEEEE--CCCE----EE
Confidence 46889999888754432 233446677888 4454 44
Q ss_pred EEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCC
Q 003886 315 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSS 394 (789)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~ 394 (789)
..+ ....|+++|+.. .......+..+...+....|+|||+.|+..+.+.
T Consensus 191 ~~~---------------~dg~i~i~d~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~- 239 (401)
T 4aez_A 191 SGS---------------RSGAIHHHDVRI---------------ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN- 239 (401)
T ss_dssp EEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred EEc---------------CCCCEEEEeccc---------------CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC-
Confidence 444 234688888721 2233556666777888999999999988877543
Q ss_pred CCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003886 395 VDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (789)
Q Consensus 395 ~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~d 474 (789)
.|++||+.++........ ....+..+.|+|++..+++++.......|..+|
T Consensus 240 ----------~v~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 240 ----------VVQIWDARSSIPKFTKTN-------------------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp ----------CEEEEETTCSSEEEEECC-------------------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEE
T ss_pred ----------eEEEccCCCCCccEEecC-------------------CcceEEEEEECCCCCCEEEEecCCCCCEEEEEE
Confidence 599999876443210000 012356788999998887776532344577778
Q ss_pred CCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 475 VSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 475 l~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
+.+++...............++++++.++.+..... ..+.+.+...
T Consensus 291 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~d--g~i~v~~~~~ 336 (401)
T 4aez_A 291 AATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPD--NNLSIWSYSS 336 (401)
T ss_dssp TTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTT--CEEEEEEEET
T ss_pred CCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCC--CcEEEEecCC
Confidence 888887666555555666788999998877654332 2466666654
No 313
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.15 E-value=1.9e-08 Score=107.31 Aligned_cols=252 Identities=12% Similarity=0.041 Sum_probs=139.7
Q ss_pred cccEEEEeCCC----CCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecC-CCCEEEEEe
Q 003886 154 TGASAVVPSPS----GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVA 226 (789)
Q Consensus 154 ~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSp-Dg~~la~~~ 226 (789)
..+...+|||+ |+.|+.....+ .+.+|+ .++....+.. ..+.| ..+.|+| |++.|+..+
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~---~~~~i------~~~~~~~~~~~~l~s~~ 135 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHYVG---HGNAI------NELKFHPRDPNLLLSVS 135 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEEES---CCSCE------EEEEECSSCTTEEEEEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeeecC---CCCcE------EEEEECCCCCCEEEEEe
Confidence 45788999999 66777766543 566773 4444444331 12222 7899999 888887754
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccC--CCCCCccceEEEee
Q 003886 227 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSVGQVVWAP 304 (789)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~--~~~~~~~~~~~wSP 304 (789)
.+ ..|.+||+.+++...... ......+..+.|+|
T Consensus 136 ~d--------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 136 KD--------------------------------------------HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TT--------------------------------------------SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CC--------------------------------------------CeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 32 568999999887655410 12344678999999
Q ss_pred CCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhh----hhcC-CC-------CCCCeeecCCCCC
Q 003886 305 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELE----LKES-SS-------EDLPVVNLTESIS 372 (789)
Q Consensus 305 Dg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~----~~~~-~~-------~~~~~~~Lt~~~~ 372 (789)
||+. |+..+. ...|+++|+........... .++. .. .......+..+..
T Consensus 172 ~~~~----l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 172 LGEK----IMSCGM---------------DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp TSSE----EEEEET---------------TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred CCCE----EEEecC---------------CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 9997 766652 23677777732211000000 0000 00 0001111222455
Q ss_pred ccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCC--ccccee--eEEeeeeccCCCCCccccccCCCC
Q 003886 373 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS--SLEKIV--DVIPVVQCAEGDCFPGLYSSSILS 448 (789)
Q Consensus 373 ~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~--~t~~~~--~v~~~~~~~~~~~f~g~~~~~~~~ 448 (789)
.+...+|+ |+.|+..+.+ ..|.+||+.++.... +..... ........ ....+..
T Consensus 233 ~v~~~~~~--~~~l~~~~~d-----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~ 290 (366)
T 3k26_A 233 YVDCVRWL--GDLILSKSCE-----------NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY---------SQCDIWY 290 (366)
T ss_dssp CCCEEEEE--TTEEEEECSS-----------SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC---------SSCCSSC
T ss_pred eEEEEEEc--CCEEEEEecC-----------CEEEEEeCCCccccccccccCCcchheeccccc---------cCCcEEE
Confidence 67788888 6777665543 358999987654321 111110 11111110 1123567
Q ss_pred CccccC--CCEEEEEEEeCCeEEEEEEECCCCc-----EEEecCC--CCCceeEEeeecCCEEEEEEe
Q 003886 449 NPWLSD--GCTMLLSSIWGSSQVIISVNVSSGE-----LLRITPA--ESNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 449 ~~ws~D--g~~l~~~~~~~~~~~l~~~dl~tg~-----~~~lt~~--~~~~~~~~~s~dg~~l~~~~s 507 (789)
+.|+|| |+.| +++..++. |..+|+.+++ ...+... ...+....|+++++.|+....
T Consensus 291 ~~~s~~~~~~~l-~~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 291 MRFSMDFWQKML-ALGNQVGK--LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp CCCEECTTSSEE-EEECTTSC--EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EEEcCCCCCcEE-EEEecCCc--EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC
Confidence 889999 8855 45555554 4455666664 2234433 234555688888887665543
No 314
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.14 E-value=7.1e-09 Score=109.66 Aligned_cols=288 Identities=12% Similarity=0.015 Sum_probs=152.2
Q ss_pred cccEEEEeCCC-CCeEEEEecCCCCCCeEEEEecCCc-eeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPS-GSKLLVVRNPENESPIQFELWSQSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPd-G~~la~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
+.+...+|||+ |+.||..+.+ +.-.+|.+..... .......-.+..+.| ..+.|+|||+.|+..+.+...
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D--~~i~vWd~~~~~~~~~~~~~~l~~h~~~V------~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRD--KTIIMWKLTRDETNYGIPQRALRGHSHFV------SDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETT--SCEEEEEECCSSSCSEEEEEEECCCSSCE------EEEEECTTSSEEEEEETTSEE
T ss_pred CCEEEEEEeCCCCCEEEEEcCC--CeEEEEECCCCCcccceeeEEEeCCCCCE------EEEEECCCCCEEEEEcccccc
Confidence 45889999998 4667666543 2222333332111 111111111222233 789999999999887765432
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (789)
. .|......................+.++....+++..+..+.+||+.+..............+..+.|++++..
T Consensus 111 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--- 185 (340)
T 4aow_A 111 R--LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN--- 185 (340)
T ss_dssp E--EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS---
T ss_pred e--EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC---
Confidence 1 11111110000000111111122234443333444456788899987765544421222345678899999876
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEec
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~ 391 (789)
.++++-. .+..|.++|+. .......+..+...+...+|||||+.|+..+.
T Consensus 186 -~~~~s~~-------------~d~~i~i~d~~----------------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 186 -PIIVSCG-------------WDKLVKVWNLA----------------NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp -CEEEEEE-------------TTSCEEEEETT----------------TTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred -cEEEEEc-------------CCCEEEEEECC----------------CCceeeEecCCCCcEEEEEECCCCCEEEEEeC
Confidence 4443311 22368888872 22334556666777888999999999887665
Q ss_pred CCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003886 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (789)
Q Consensus 392 ~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (789)
+. .|.+||+.+.......... ..+....|+|++. ++.. ..++. |.
T Consensus 236 Dg-----------~i~iwd~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~-~~~~-~~d~~--i~ 280 (340)
T 4aow_A 236 DG-----------QAMLWDLNEGKHLYTLDGG--------------------DIINALCFSPNRY-WLCA-ATGPS--IK 280 (340)
T ss_dssp TC-----------EEEEEETTTTEEEEEEECS--------------------SCEEEEEECSSSS-EEEE-EETTE--EE
T ss_pred CC-----------eEEEEEeccCceeeeecCC--------------------ceEEeeecCCCCc-eeec-cCCCE--EE
Confidence 43 5899998764432110000 0133557888876 4333 34444 45
Q ss_pred EEECCCCcEEEecC----------CCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 472 SVNVSSGELLRITP----------AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 472 ~~dl~tg~~~~lt~----------~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
.+|+.++....-.. ....+....|+++|+.|+... .... |.+.++.++
T Consensus 281 iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs-~Dg~---v~iW~~~tG 338 (340)
T 4aow_A 281 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY-TDNL---VRVWQVTIG 338 (340)
T ss_dssp EEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE-TTSC---EEEEEEEC-
T ss_pred EEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe-CCCE---EEEEeCCCc
Confidence 55776665433221 112334457888888766543 3332 666666554
No 315
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.13 E-value=1.7e-10 Score=118.28 Aligned_cols=104 Identities=20% Similarity=0.285 Sum_probs=75.0
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
..|.||++||.+++ ...|......|++.||.|+++|+|| +|.+.... ..+++++.+.+..+++.-.++.
T Consensus 15 ~~~~vvllHG~~~~--~~~w~~~~~~L~~~~~~vi~~Dl~G---hG~S~~~~------~~~~~~~a~~l~~~l~~l~~~~ 83 (264)
T 1r3d_A 15 RTPLVVLVHGLLGS--GADWQPVLSHLARTQCAALTLDLPG---HGTNPERH------CDNFAEAVEMIEQTVQAHVTSE 83 (264)
T ss_dssp TBCEEEEECCTTCC--GGGGHHHHHHHTTSSCEEEEECCTT---CSSCC-------------CHHHHHHHHHHHTTCCTT
T ss_pred CCCcEEEEcCCCCC--HHHHHHHHHHhcccCceEEEecCCC---CCCCCCCC------ccCHHHHHHHHHHHHHHhCcCC
Confidence 34889999997664 5678888888876899999999998 55543211 1234555555555555422222
Q ss_pred ccEEEEEcCccHHHHHH---HHHhCCCceeEEEEeCCc
Q 003886 671 SKVTVVGGSHGGFLTTH---LIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~---~~~~~p~~~~a~v~~~pv 705 (789)
.++.|+||||||.+++. ++.++|++++++|+.++.
T Consensus 84 ~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 84 VPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH 121 (264)
T ss_dssp SEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCC
T ss_pred CceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCC
Confidence 23999999999999999 878899999999998764
No 316
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.12 E-value=1.3e-08 Score=107.84 Aligned_cols=277 Identities=6% Similarity=-0.104 Sum_probs=152.6
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCC--ccceeecCCcceecccEEEEeCCCCC-eEEEEecCCCCCC
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN--SVTFQWAPFPVEMTGASAVVPSPSGS-KLLVVRNPENESP 179 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~SPdG~-~la~~~~~~~~~~ 179 (789)
.++|||+.++... ....+.++++...... ...+.... ..+...+|+|+|+ +|+.....+
T Consensus 18 ~~s~~~~~l~~~~---------~d~~v~iw~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~dg---- 79 (342)
T 1yfq_A 18 KIIPSKSLLLITS---------WDGSLTVYKFDIQAKNVDLLQSLRYK-----HPLLCCNFIDNTDLQIYVGTVQG---- 79 (342)
T ss_dssp EEEGGGTEEEEEE---------TTSEEEEEEEETTTTEEEEEEEEECS-----SCEEEEEEEESSSEEEEEEETTS----
T ss_pred EEcCCCCEEEEEc---------CCCeEEEEEeCCCCccccceeeeecC-----CceEEEEECCCCCcEEEEEcCCC----
Confidence 3468888776542 2346666666443211 22222222 4588899999999 888776543
Q ss_pred eEEEEe-c-CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcc
Q 003886 180 IQFELW-S-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (789)
Q Consensus 180 ~~~~i~-~-~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (789)
.+.+| . .......+.. ....+.| ..+.|+| ++.|+..+.+
T Consensus 80 -~i~~wd~~~~~~~~~~~~-~~~~~~v------~~l~~~~-~~~l~s~~~d----------------------------- 121 (342)
T 1yfq_A 80 -EILKVDLIGSPSFQALTN-NEANLGI------CRICKYG-DDKLIAASWD----------------------------- 121 (342)
T ss_dssp -CEEEECSSSSSSEEECBS-CCCCSCE------EEEEEET-TTEEEEEETT-----------------------------
T ss_pred -eEEEEEeccCCceEeccc-cCCCCce------EEEEeCC-CCEEEEEcCC-----------------------------
Confidence 35556 3 3322222111 0022223 7899999 8888775432
Q ss_pred eeeCCcccccCCccCceEEEEEccC---------CceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeee
Q 003886 258 DWEEDWGETYAGKRQPSLFVININS---------GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK 328 (789)
Q Consensus 258 ~~~~d~g~~~~~~~~~~l~v~d~~~---------g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~ 328 (789)
..|.+||+.+ ++.... ......+..+.|+|++ |+..+
T Consensus 122 ---------------~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~------l~~~~----------- 167 (342)
T 1yfq_A 122 ---------------GLIEVIDPRNYGDGVIAVKNLNSNN--TKVKNKIFTMDTNSSR------LIVGM----------- 167 (342)
T ss_dssp ---------------SEEEEECHHHHTTBCEEEEESCSSS--SSSCCCEEEEEECSSE------EEEEE-----------
T ss_pred ---------------CeEEEEcccccccccccccCCeeeE--EeeCCceEEEEecCCc------EEEEe-----------
Confidence 5688888876 543333 2344467788999875 34333
Q ss_pred eeccCCcceEEEecccccchhhhhhhhcCCCCC-CC---eeecCCCCCccCcceecC-CCCEEEEEecCCCCCCCCcccc
Q 003886 329 YCYNRPCALYAVRVSLYKSEASELELKESSSED-LP---VVNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSAT 403 (789)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~---~~~Lt~~~~~~~~p~~Sp-DG~~la~~s~~~~~~~g~~~~~ 403 (789)
....|+++|+ .+ +. ..........+...+|+| ||+.|+..+.+.
T Consensus 168 ----~d~~i~i~d~-----------------~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg---------- 216 (342)
T 1yfq_A 168 ----NNSQVQWFRL-----------------PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG---------- 216 (342)
T ss_dssp ----STTEEEEEES-----------------SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS----------
T ss_pred ----CCCeEEEEEC-----------------CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC----------
Confidence 2236888887 32 21 223334455678899999 999888777542
Q ss_pred ceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003886 404 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (789)
Q Consensus 404 ~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~l 483 (789)
.+.+|++..++.......... ........... -....+..+.|+||++.| +++..++. |..+|+.+++....
T Consensus 217 -~i~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l-~~~~~dg~--i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 217 -RVAVEFFDDQGDDYNSSKRFA-FRCHRLNLKDT---NLAYPVNSIEFSPRHKFL-YTAGSDGI--ISCWNLQTRKKIKN 288 (342)
T ss_dssp -EEEEEECCTTCCSTTCTTCEE-EECCCCCTTCC---SSCCCEEEEEECTTTCCE-EEEETTSC--EEEEETTTTEEEEE
T ss_pred -cEEEEEEcCCCccccccccee-eeccccccccc---ccceeEEEEEEcCCCCEE-EEecCCce--EEEEcCccHhHhhh
Confidence 578888776511000000000 00000000000 000134567899999866 45554554 55568888886655
Q ss_pred cCCC-CCceeEEeeecCCEEEEEEeCC
Q 003886 484 TPAE-SNFSWSLLTLDGDNIIAVSSSP 509 (789)
Q Consensus 484 t~~~-~~~~~~~~s~dg~~l~~~~ss~ 509 (789)
...+ .. ....++++++.|+....+.
T Consensus 289 ~~~~h~~-~v~~~~~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 289 FAKFNED-SVVKIACSDNILCLATSDD 314 (342)
T ss_dssp CCCCSSS-EEEEEEECSSEEEEEEECT
T ss_pred hhcccCC-CceEecCCCCeEEEEecCC
Confidence 5443 32 2223338888777666544
No 317
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.12 E-value=4.9e-09 Score=113.42 Aligned_cols=205 Identities=9% Similarity=0.051 Sum_probs=130.2
Q ss_pred cccEEEEeCCCC-CeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecC-CCCEEEEEeecC
Q 003886 154 TGASAVVPSPSG-SKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 229 (789)
Q Consensus 154 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSp-Dg~~la~~~~~~ 229 (789)
..+...+|||+| +.|+.....+ .+.+| ..++....... .+..+.| ..+.|+| |++.|+..+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~-~~h~~~v------~~~~~~~~~~~~l~s~~~-- 139 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGG-----DIILWDYDVQNKTSFIQG-MGPGDAI------TGMKFNQFNTNQLFVSSI-- 139 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTS-----CEEEEETTSTTCEEEECC-CSTTCBE------EEEEEETTEEEEEEEEET--
T ss_pred CCEEEEEECCCCCCEEEEEcCCC-----eEEEEeCCCcccceeeec-CCcCCce------eEEEeCCCCCCEEEEEeC--
Confidence 358889999999 7887766543 35666 33444444432 1222333 7899999 6676666533
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCC-CCCccceEEEeeCCCC
Q 003886 230 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEG 308 (789)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~-~~~~~~~~~wSPDg~~ 308 (789)
+..|.+||+.++....+.... ....+..++|+||++.
T Consensus 140 ------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 177 (383)
T 3ei3_B 140 ------------------------------------------RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQM 177 (383)
T ss_dssp ------------------------------------------TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTE
T ss_pred ------------------------------------------CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCE
Confidence 257899999987766663222 1245779999999997
Q ss_pred CccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCC-EEE
Q 003886 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGK-FLV 387 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~-~la 387 (789)
|+..+ .+..|+++|+ .+.....+..+...+...+|+|+|+ .|+
T Consensus 178 ----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 178 ----LATGD---------------STGRLLLLGL-----------------DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp ----EEEEE---------------TTSEEEEEET-----------------TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred ----EEEEC---------------CCCCEEEEEC-----------------CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 76655 2347889997 5556677777777889999999999 555
Q ss_pred EEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcccc-CCCEEEEEEEeCC
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGS 466 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~-Dg~~l~~~~~~~~ 466 (789)
..+.+ ..|.+||+.+...... ....... ...+..+.|+| ||+.|+ ++..++
T Consensus 222 s~~~d-----------~~i~iwd~~~~~~~~~------~~~~~~~----------~~~v~~~~~s~~~~~~l~-~~~~d~ 273 (383)
T 3ei3_B 222 TSSVD-----------ATVKLWDLRNIKDKNS------YIAEMPH----------EKPVNAAYFNPTDSTKLL-TTDQRN 273 (383)
T ss_dssp EEETT-----------SEEEEEEGGGCCSTTC------EEEEEEC----------SSCEEEEEECTTTSCEEE-EEESSS
T ss_pred EEeCC-----------CEEEEEeCCCCCcccc------eEEEecC----------CCceEEEEEcCCCCCEEE-EEcCCC
Confidence 54433 2589999876432110 1111110 11345678999 998664 444455
Q ss_pred eEEEEEEECCCCcE
Q 003886 467 SQVIISVNVSSGEL 480 (789)
Q Consensus 467 ~~~l~~~dl~tg~~ 480 (789)
. |..+|+.+++.
T Consensus 274 ~--i~iwd~~~~~~ 285 (383)
T 3ei3_B 274 E--IRVYSSYDWSK 285 (383)
T ss_dssp E--EEEEETTBTTS
T ss_pred c--EEEEECCCCcc
Confidence 4 55557666543
No 318
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.12 E-value=9.3e-10 Score=119.32 Aligned_cols=281 Identities=9% Similarity=-0.014 Sum_probs=148.7
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
.++|||++++-. ...+.+.++++.+. .....+.... ..+...+|||||++||..... +...+|
T Consensus 73 ~~sp~~~~l~s~---------s~D~~v~iWd~~~~-~~~~~~~~h~-----~~v~~~~~s~~g~~las~~~d--~~v~iw 135 (380)
T 3iz6_a 73 DWTPEKNWIVSA---------SQDGRLIVWNALTS-QKTHAIKLHC-----PWVMECAFAPNGQSVACGGLD--SACSIF 135 (380)
T ss_dssp EECTTSSCEEEE---------ETTSEEEEEETTTT-EEEEEEECCC-----TTCCCCEECTTSSEEEECCSS--SCCEEE
T ss_pred EEcCCCCEEEEE---------eCCCeEEEEECCCC-ccceEEecCC-----CCEEEEEECCCCCEEEEeeCC--CcEEEE
Confidence 356788766432 23456667665222 2222222222 346778999999999875443 333344
Q ss_pred EEecCCce---eEEEecCCCccccccCCCcccceeecCCCC-EEEEEeecCCCCCCCccCCCCCCCCC-----CcCCCCC
Q 003886 183 ELWSQSQL---EKEFHVPQTVHGSVYADGWFEGISWNSDET-LIAYVAEEPSPSKPTFSLGSTKGGSS-----DKDCNSW 253 (789)
Q Consensus 183 ~i~~~~~~---~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 253 (789)
.+...... ........+..+.+ ..+.|+|++. .|+..+.+.... .|+......... ...+...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v------~~~~~~~~~~~~l~s~s~D~~i~--~wd~~~~~~~~~~~~~~~~~h~~~ 207 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYA------SSCQYVPDQETRLITGSGDQTCV--LWDVTTGQRISIFGSEFPSGHTAD 207 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCC------CCCBCCSSSSSCEEEECTTSCEE--EECTTTCCEEEEECCCSSSSCCSC
T ss_pred ECCCCccccCCccceeeccCCCcce------EEEEEecCCCCEEEEECCCCcEE--EEEcCCCcEEEEeecccCCCCccC
Confidence 33311100 00011111222233 6788999754 566666555432 343222211100 0112222
Q ss_pred CCcceeeC-CcccccCCccCceEEEEEccC-Cc-eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeee
Q 003886 254 KGQGDWEE-DWGETYAGKRQPSLFVININS-GE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 330 (789)
Q Consensus 254 ~~~~~~~~-d~g~~~~~~~~~~l~v~d~~~-g~-~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~ 330 (789)
.....|.+ +....+++..+..|.+||+.. ++ ...+ ......+..++|+|||+. |+..+
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----l~s~s------------- 268 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY--HGHEGDINSVKFFPDGQR----FGTGS------------- 268 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE--CCCSSCCCEEEECTTSSE----EEEEC-------------
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE--CCcCCCeEEEEEecCCCe----EEEEc-------------
Confidence 22233433 322334455678899999863 33 3344 233446789999999997 76665
Q ss_pred ccCCcceEEEecccccchhhhhhhhcCCCCCCCe-eecCCC-------CCccCcceecCCCCEEEEEecCCCCCCCCccc
Q 003886 331 YNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES-------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSA 402 (789)
Q Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt~~-------~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~ 402 (789)
.+..|.++|+ .++.. ..+... ...+...+|||||+.|+..+.+
T Consensus 269 --~D~~i~lwd~-----------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---------- 319 (380)
T 3iz6_a 269 --DDGTCRLFDM-----------------RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---------- 319 (380)
T ss_dssp --SSSCEEEEET-----------------TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT----------
T ss_pred --CCCeEEEEEC-----------------CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC----------
Confidence 2336778887 33332 222211 1236778999999988766543
Q ss_pred cceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003886 403 TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (789)
Q Consensus 403 ~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~ 473 (789)
..|++||..+++... .+..... -....+..+.|+|||+.| +++..++...||.+
T Consensus 320 -g~i~vwd~~~~~~~~---------~~~~~~~------~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 320 -GDCYVWDTLLAEMVL---------NLGTLQN------SHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAF 373 (380)
T ss_dssp -SCEEEEETTTCCEEE---------EECCSCS------SCCCCCCEEEECSSSSEE-EEECTTSCEEEEEC
T ss_pred -CCEEEEECCCCceEE---------EEecccC------CCCCceEEEEECCCCCEE-EEeeCCCCEEEEec
Confidence 259999987654321 0000000 011245678899999955 67777777777754
No 319
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.12 E-value=7.4e-11 Score=124.48 Aligned_cols=178 Identities=13% Similarity=0.091 Sum_probs=109.9
Q ss_pred CCeeEEEEEEecCCCCC-CCCCcEEEEEcCCCCCCCchhhHHHHHHHHH------CCcEEEEEcCCCCCCCCchhhccC-
Q 003886 572 AQKPFEAIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQSL- 643 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~-~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~------~Gy~V~~~d~rGs~G~G~~~~~~~- 643 (789)
-|.....++++|+++++ .+++|+|+++||... ..........++. .+++||.+++.. +..++....
T Consensus 22 l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~---f~~~~~~~~~l~~~~~~~~~~~IvV~i~~~~---R~~dytp~~~ 95 (331)
T 3gff_A 22 LKETREYVIALPEGYAQSLEAYPVVYLLDGEDQ---FDHMASLLQFLSQGTMPQIPKVIIVGIHNTN---RMRDYTPTHT 95 (331)
T ss_dssp TTEEEEEEEECCTTGGGSCCCEEEEEESSHHHH---HHHHHHHHHHHTCSSSCSSCCCEEEEECCSS---HHHHSCSSCC
T ss_pred CCCeEEEEEEeCCCCCCCCCCccEEEEecChhh---hHHHHHHHHHHHhhhhcCCCCEEEEEECCCC---cccccCCCcc
Confidence 36778899999998865 688999999999311 0111112334443 358899988621 111111000
Q ss_pred ----CC---------CCCcccHHHHH--HHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCccch
Q 003886 644 ----PG---------KVGSQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL 708 (789)
Q Consensus 644 ----~~---------~~~~~~~~D~~--~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~~~ 708 (789)
.+ ..+.....+.+ +.+.++.++..++..| +|+|||+||+++++++.++|++|+++++.+|...+
T Consensus 96 ~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~ 174 (331)
T 3gff_A 96 LVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWF 174 (331)
T ss_dssp SBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTT
T ss_pred ccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhhheeeEeCchhcC
Confidence 00 11122233322 3455665554466555 79999999999999999999999999999997532
Q ss_pred hhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeCCCC-------CCChHHHHHH
Q 003886 709 ALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL-------RVPVSNGLQV 781 (789)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~-------~vp~~~~~~l 781 (789)
... .. .+...... ........|+++.||+.|. .++...+.++
T Consensus 175 ~~~------------~~--------------~~~~~~~~-----~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l 223 (331)
T 3gff_A 175 DSP------------HY--------------LTLLEERV-----VKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAF 223 (331)
T ss_dssp TTT------------HH--------------HHHHHHHH-----HHCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHH
T ss_pred ChH------------HH--------------HHHHHHHh-----hcccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHH
Confidence 100 00 01111111 1112245799999999998 6788888999
Q ss_pred HHHCCC
Q 003886 782 IYHIPF 787 (789)
Q Consensus 782 ~~~l~~ 787 (789)
+++|+.
T Consensus 224 ~~~Lk~ 229 (331)
T 3gff_A 224 ADKLTK 229 (331)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988863
No 320
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.12 E-value=9.7e-10 Score=110.80 Aligned_cols=179 Identities=13% Similarity=0.062 Sum_probs=108.6
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCc--EEEEEcCCCCC-----CCCchh-hcc-----CCCC-CCc--ccHHHH
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY--SLLIVNYRGSL-----GFGEEA-LQS-----LPGK-VGS--QDVNDV 655 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy--~V~~~d~rGs~-----G~G~~~-~~~-----~~~~-~~~--~~~~D~ 655 (789)
.+.||++||..+ ....|......|++.|| .|+.+|.++.+ |..... .+. ...+ .+. ...+++
T Consensus 6 ~~pvvliHG~~~--~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 6 TTATLFLHGYGG--SERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CEEEEEECCTTC--CGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCcEEEECCCCC--ChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 466888999655 46788888999999996 58888877421 111000 000 0000 111 125677
Q ss_pred HHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCC-----ceeEEEEeCCccchhhhhcCCCCCcchhhhhccCcc
Q 003886 656 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 730 (789)
Q Consensus 656 ~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (789)
.++++++.++ .+.+++.++||||||.+++.++.++|+ +++.+|+.++..+...... +.+.. ..+..
T Consensus 84 ~~~i~~l~~~--~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~--~~~~~---~~~~~-- 154 (249)
T 3fle_A 84 KEVLSQLKSQ--FGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMN--ENVNE---IIVDK-- 154 (249)
T ss_dssp HHHHHHHHHT--TCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTS--SCTTT---SCBCT--
T ss_pred HHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCccccc--CCcch---hhhcc--
Confidence 7788888776 355799999999999999999998763 7899998886554221110 00000 00000
Q ss_pred ccccCCCCCh--hhHHHHHhcCccccCCCCCCCEEEEEeC------CCCCCChHHHHHHHHHCCC
Q 003886 731 KDSFTESPSV--EDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 731 ~~~~~~~~~~--~~~~~~~~~sp~~~~~~i~~P~Lii~G~------~D~~vp~~~~~~l~~~l~~ 787 (789)
.+.|.. .....+.+. ...+.+.++|+|.|+|+ .|.+||...++.+...+++
T Consensus 155 ----~g~p~~~~~~~~~l~~~--~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~ 213 (249)
T 3fle_A 155 ----QGKPSRMNAAYRQLLSL--YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRG 213 (249)
T ss_dssp ----TCCBSSCCHHHHHTGGG--HHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTT
T ss_pred ----cCCCcccCHHHHHHHHH--HhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhh
Confidence 111110 112222111 22345567899999998 7999999999877666654
No 321
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.12 E-value=3.3e-09 Score=112.50 Aligned_cols=246 Identities=10% Similarity=0.040 Sum_probs=143.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCc----eeEEEecCCCccccccCCCcccceeecCCCC-EEEEEe
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSDET-LIAYVA 226 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~----~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~-~la~~~ 226 (789)
..+...+|||||++|+.....+ .+.+| ..++ ........ +.| ..+.|+|||+ .|+..+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~-----~v~iw~~~~~~~~~~~~~~~~~~----~~v------~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDG-----SLTVYKFDIQAKNVDLLQSLRYK----HPL------LCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTS-----EEEEEEEETTTTEEEEEEEEECS----SCE------EEEEEEESSSEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCC-----eEEEEEeCCCCccccceeeeecC----Cce------EEEEECCCCCcEEEEEc
Confidence 4588999999999998876543 34455 2333 22222222 222 7899999999 888764
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEc-cCCceEeccCCCCCCccceEEEeeC
Q 003886 227 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI-NSGEVQAVKGIPKSLSVGQVVWAPL 305 (789)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~-~~g~~~~l~~~~~~~~~~~~~wSPD 305 (789)
.+ ..|.+||+ .+++...+.+......+..+.|+|
T Consensus 77 ~d--------------------------------------------g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~- 111 (342)
T 1yfq_A 77 VQ--------------------------------------------GEILKVDLIGSPSFQALTNNEANLGICRICKYG- 111 (342)
T ss_dssp TT--------------------------------------------SCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-
T ss_pred CC--------------------------------------------CeEEEEEeccCCceEeccccCCCCceEEEEeCC-
Confidence 32 56899999 988887773211455678999999
Q ss_pred CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCCCCccCcceecCCCC
Q 003886 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGK 384 (789)
Q Consensus 306 g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~ 384 (789)
++. |+..+ .+..|+++|+....... ....++ ...+. ....+....|+|++
T Consensus 112 ~~~----l~s~~---------------~d~~i~iwd~~~~~~~~--------~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 112 DDK----LIAAS---------------WDGLIEVIDPRNYGDGV--------IAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp TTE----EEEEE---------------TTSEEEEECHHHHTTBC--------EEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred CCE----EEEEc---------------CCCeEEEEccccccccc--------ccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 775 66554 23368888872100000 000022 22233 45567889999998
Q ss_pred EEEEEecCCCCCCCCccccceeEEeecCC-CCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcccc-CCCEEEEEE
Q 003886 385 FLVFLSAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSS 462 (789)
Q Consensus 385 ~la~~s~~~~~~~g~~~~~~~L~~~d~~~-~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~-Dg~~l~~~~ 462 (789)
|+..+.+ ..|++||+.+ +....... . .. ....+..+.|+| |++.+ +++
T Consensus 163 -l~~~~~d-----------~~i~i~d~~~~~~~~~~~~------~---~~--------~~~~i~~i~~~~~~~~~l-~~~ 212 (342)
T 1yfq_A 163 -LIVGMNN-----------SQVQWFRLPLCEDDNGTIE------E---SG--------LKYQIRDVALLPKEQEGY-ACS 212 (342)
T ss_dssp -EEEEEST-----------TEEEEEESSCCTTCCCEEE------E---CS--------CSSCEEEEEECSGGGCEE-EEE
T ss_pred -EEEEeCC-----------CeEEEEECCccccccceee------e---cC--------CCCceeEEEECCCCCCEE-EEE
Confidence 5554433 3699999876 33211000 0 00 001234668999 99855 555
Q ss_pred EeCCeEEEEEEECC-----CCcEEEecCCCC---------CceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 463 IWGSSQVIISVNVS-----SGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 463 ~~~~~~~l~~~dl~-----tg~~~~lt~~~~---------~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
..++...||.++.. ......+..... .+....++++++.|+.... .. .+.+.++.+
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg---~i~vwd~~~ 282 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS-DG---IISCWNLQT 282 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET-TS---CEEEEETTT
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC-Cc---eEEEEcCcc
Confidence 66777778777654 123333332211 3445578888887654443 22 367777654
No 322
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.12 E-value=2.3e-08 Score=106.56 Aligned_cols=162 Identities=9% Similarity=-0.002 Sum_probs=104.9
Q ss_pred cceeecC--CCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEec
Q 003886 211 EGISWNS--DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 288 (789)
Q Consensus 211 ~~~~wSp--Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l 288 (789)
..+.|+| +|+.|+..+.+ ..|.+||+.+++...+
T Consensus 129 ~~~~~~~~~~~~~l~s~s~d--------------------------------------------g~i~~wd~~~~~~~~~ 164 (343)
T 3lrv_A 129 IYMYGHNEVNTEYFIWADNR--------------------------------------------GTIGFQSYEDDSQYIV 164 (343)
T ss_dssp EEEECCC---CCEEEEEETT--------------------------------------------CCEEEEESSSSCEEEE
T ss_pred EEEEcCCCCCCCEEEEEeCC--------------------------------------------CcEEEEECCCCcEEEE
Confidence 7899999 99988876543 5688999999887554
Q ss_pred cCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-e-ee
Q 003886 289 KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-V-VN 366 (789)
Q Consensus 289 ~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~-~~ 366 (789)
........+..++|+|||+. |+..+ .+..|.++|+ .+++ . ..
T Consensus 165 ~~~~~~~~i~~~~~~pdg~~----lasg~---------------~dg~i~iwd~-----------------~~~~~~~~~ 208 (343)
T 3lrv_A 165 HSAKSDVEYSSGVLHKDSLL----LALYS---------------PDGILDVYNL-----------------SSPDQASSR 208 (343)
T ss_dssp ECCCSSCCCCEEEECTTSCE----EEEEC---------------TTSCEEEEES-----------------SCTTSCCEE
T ss_pred EecCCCCceEEEEECCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCCCCccE
Confidence 21223335789999999986 55544 2336888888 3333 3 45
Q ss_pred cCC-CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccC
Q 003886 367 LTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 445 (789)
Q Consensus 367 Lt~-~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~ 445 (789)
+.. +...+...+|||||++|+..+.. .|.+||+.++........... ..+ .
T Consensus 209 ~~~~h~~~v~~l~fs~~g~~l~s~~~~------------~v~iwd~~~~~~~~~~~~~~~----------~~~------~ 260 (343)
T 3lrv_A 209 FPVDEEAKIKEVKFADNGYWMVVECDQ------------TVVCFDLRKDVGTLAYPTYTI----------PEF------K 260 (343)
T ss_dssp CCCCTTSCEEEEEECTTSSEEEEEESS------------BEEEEETTSSTTCBSSCCCBC--------------------
T ss_pred EeccCCCCEEEEEEeCCCCEEEEEeCC------------eEEEEEcCCCCcceeeccccc----------ccc------c
Confidence 665 66788999999999998877721 499999987544211110000 000 1
Q ss_pred CC--CCccccCCCEEEEEEEeCCeEEEEEEECCCCcE
Q 003886 446 IL--SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL 480 (789)
Q Consensus 446 ~~--~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~ 480 (789)
+. .+.|+|+|+.|+..+..++...||.++......
T Consensus 261 ~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~ 297 (343)
T 3lrv_A 261 TGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNW 297 (343)
T ss_dssp -CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSE
T ss_pred ccceEEEECCCCCEEEEecCCCCcEEEEEEcccccce
Confidence 11 378999999776544336777888776444333
No 323
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.11 E-value=2.5e-10 Score=118.62 Aligned_cols=117 Identities=19% Similarity=0.198 Sum_probs=91.2
Q ss_pred CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcC--------CCCCCCCchhhc--c
Q 003886 573 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQ--S 642 (789)
Q Consensus 573 g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~--------rGs~G~G~~~~~--~ 642 (789)
...+...+++|.+ ..++.|+||.+||+... ..+||+|+.+++ +|+.|+|. |.+ .
T Consensus 89 s~~~~~~i~lP~~--~~~p~Pvii~i~~~~~~-------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~ 152 (375)
T 3pic_A 89 SISFTVTITYPSS--GTAPYPAIIGYGGGSLP-------------APAGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYG 152 (375)
T ss_dssp EEEEEEEEECCSS--SCSSEEEEEEETTCSSC-------------CCTTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred eeEEEEEEECCCC--CCCCccEEEEECCCccc-------------cCCCeEEEEecccccccccCCCCcccee-cccccC
Confidence 3568899999974 34788999999984221 357999999997 66667776 331 1
Q ss_pred CCCCCCcccH--HHHHHHHHHHHHcC--CCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 643 LPGKVGSQDV--NDVLTAIDHVIDMG--LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 643 ~~~~~~~~~~--~D~~~~i~~l~~~~--~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
....+|.... -++..+++||..++ .||++||+|+|||+||..++++++.. +||+++|..++..
T Consensus 153 ~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~ 219 (375)
T 3pic_A 153 SSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGA 219 (375)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCT
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCC
Confidence 1234554433 58999999999988 89999999999999999999999986 5999999988644
No 324
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.11 E-value=2.7e-09 Score=115.82 Aligned_cols=259 Identities=12% Similarity=0.064 Sum_probs=145.8
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCc------eeEEEecCCCccccccCCCcccceeecCC----C--
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ------LEKEFHVPQTVHGSVYADGWFEGISWNSD----E-- 219 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~------~~~~~~~~~~~~g~v~~d~~~~~~~wSpD----g-- 219 (789)
..+...+|+| +.|+..+..+ .+.+| ..++ ....+.. ..+.| ..+.|+|| |
T Consensus 17 ~~i~~~~~~~--~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~---h~~~v------~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCSGDG-----YLKVWDNKLLDNENPKDKSYSHFV---HKSGL------HHVDVLQAIERDAFE 80 (397)
T ss_dssp SCEEEEEECS--SEEEEEETTS-----EEEEEESBCCTTCCGGGGEEEEEC---CTTCE------EEEEEEEEEETTTEE
T ss_pred cCeEEEEecC--CeEEEEcCCC-----EEEEEECCCcccccCCCcceEEec---CCCcE------EEEEEecccccCCcc
Confidence 4588899999 6777765543 45566 3333 2222221 11222 78999999 9
Q ss_pred -CEEEEEeecCCCCCCCccCCCCCC-----CCCCcCC-----CCCCCcceee----CCccc-ccCCccCceEEEEEccC-
Q 003886 220 -TLIAYVAEEPSPSKPTFSLGSTKG-----GSSDKDC-----NSWKGQGDWE----EDWGE-TYAGKRQPSLFVININS- 282 (789)
Q Consensus 220 -~~la~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~----~d~g~-~~~~~~~~~l~v~d~~~- 282 (789)
+.|+..+.+.... .|+...... ......+ ........|. ++... .+++..+..|.+||+.+
T Consensus 81 ~~~l~s~~~dg~i~--iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 81 LCLVATTSFSGDLL--FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEEEEETTSCEE--EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred ccEEEEEcCCCCEE--EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 8888877655332 333222211 1111222 1334456788 77655 56666778999999987
Q ss_pred -----CceE------eccC-----CCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEeccccc
Q 003886 283 -----GEVQ------AVKG-----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYK 346 (789)
Q Consensus 283 -----g~~~------~l~~-----~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 346 (789)
++.. .+.+ ......+..+.|+||| . |+..+ ....|+++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~----l~~~~---------------~dg~i~i~d~---- 214 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L----IATGF---------------NNGTVQISEL---- 214 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E----EEEEC---------------TTSEEEEEET----
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e----EEEEe---------------CCCcEEEEEC----
Confidence 4432 2211 1124467789999999 8 88766 2336888887
Q ss_pred chhhhhhhhcCCCCCCC-eeecCC---C---CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCc
Q 003886 347 SEASELELKESSSEDLP-VVNLTE---S---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS 419 (789)
Q Consensus 347 ~~~~~~~~~~~~~~~~~-~~~Lt~---~---~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~ 419 (789)
.+++ ...+.. + ...+...+|+|||+.|+..+.+. ....|.+||+.++.....
T Consensus 215 -------------~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--------~~g~i~i~d~~~~~~~~~ 273 (397)
T 1sq9_A 215 -------------STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--------SFGCITLYETEFGERIGS 273 (397)
T ss_dssp -------------TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--------TEEEEEEEETTTCCEEEE
T ss_pred -------------CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--------CCceEEEEECCCCcccce
Confidence 3333 344444 4 66788999999999988777541 114699999877543211
Q ss_pred ccceeeEEeeeeccCCCCCcc-ccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecC
Q 003886 420 LEKIVDVIPVVQCAEGDCFPG-LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 485 (789)
Q Consensus 420 t~~~~~v~~~~~~~~~~~f~g-~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~ 485 (789)
..... .+....... .....+..+.|+||++.| +++..++ .|..+|+.+++......
T Consensus 274 ~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg--~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 274 LSVPT-------HSSQASLGEFAHSSWVMSLSFNDSGETL-CSAGWDG--KLRFWDVKTKERITTLN 330 (397)
T ss_dssp ECBC---------------CCBSBSSCEEEEEECSSSSEE-EEEETTS--EEEEEETTTTEEEEEEE
T ss_pred eccCc-------ccccccccccccCCcEEEEEECCCCCEE-EEEeCCC--eEEEEEcCCCceeEEEe
Confidence 11000 000000000 001234567899999965 4445455 45556887877655443
No 325
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.11 E-value=2.8e-09 Score=125.34 Aligned_cols=246 Identities=11% Similarity=0.029 Sum_probs=148.1
Q ss_pred cccEEEEeCCCCCe-EEEEecCCCCCCeEEEEec---CCce--eEEEecCCCccccccCCCcccceeecCCCCEEEEEee
Q 003886 154 TGASAVVPSPSGSK-LLVVRNPENESPIQFELWS---QSQL--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (789)
Q Consensus 154 ~~~~~~~~SPdG~~-la~~~~~~~~~~~~~~i~~---~~~~--~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~ 227 (789)
..+...+|+|++.. |+..+..+ .+.+|+ .... .....+ .++.+.| ..+.|||||+.|+..+.
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~-----~i~~W~~~~~~~~~~~~~~~~-~~h~~~v------~~v~~s~~g~~l~sgs~ 450 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDK-----SIILWKLTKDDKAYGVAQRRL-TGHSHFV------EDVVLSSDGQFALSGSW 450 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTS-----EEEEEECCCSTTCSCEEEEEE-ECCSSCE------EEEEECTTSSEEEEEET
T ss_pred ceeEEEEecCCCCCEEEEEeCCC-----cEEEEEccCCCccccccccee-cCCCCcE------EEEEECCCCCEEEEEeC
Confidence 45888999998754 54444432 456662 1111 111111 1222223 78999999999998877
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccC--CCCCCccceEEEeeC
Q 003886 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSVGQVVWAPL 305 (789)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~--~~~~~~~~~~~wSPD 305 (789)
+...+ .|+............+...+....|+++....+++..+..|.+||..+.....+.. ......+..+.|+|+
T Consensus 451 Dg~v~--vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 451 DGELR--LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp TSEEE--EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred CCcEE--EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 65433 34432222222233444445566788887666777778899999987665544420 112234678999999
Q ss_pred CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecCCCC
Q 003886 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGK 384 (789)
Q Consensus 306 g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~ 384 (789)
+... +++++. .+..|.++|+ .++ ....+..+.+.+...+|||||+
T Consensus 529 ~~~~---~l~s~s--------------~d~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~v~~spdg~ 574 (694)
T 3dm0_A 529 TLQP---TIVSAS--------------WDKTVKVWNL-----------------SNCKLRSTLAGHTGYVSTVAVSPDGS 574 (694)
T ss_dssp SSSC---EEEEEE--------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CCcc---eEEEEe--------------CCCeEEEEEC-----------------CCCcEEEEEcCCCCCEEEEEEeCCCC
Confidence 8430 444432 2336888887 333 3456777777889999999999
Q ss_pred EEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe
Q 003886 385 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 464 (789)
Q Consensus 385 ~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~ 464 (789)
.|+..+.+. .|.+||+.++......... ..+..++|+||+..|. .+.
T Consensus 575 ~l~sg~~Dg-----------~i~iwd~~~~~~~~~~~~~--------------------~~v~~~~~sp~~~~l~-~~~- 621 (694)
T 3dm0_A 575 LCASGGKDG-----------VVLLWDLAEGKKLYSLEAN--------------------SVIHALCFSPNRYWLC-AAT- 621 (694)
T ss_dssp EEEEEETTS-----------BCEEEETTTTEEEECCBCS--------------------SCEEEEEECSSSSEEE-EEE-
T ss_pred EEEEEeCCC-----------eEEEEECCCCceEEEecCC--------------------CcEEEEEEcCCCcEEE-EEc-
Confidence 988777543 5899998775432110000 1234568999987553 333
Q ss_pred CCeEEEEEEECCCCcEEE
Q 003886 465 GSSQVIISVNVSSGELLR 482 (789)
Q Consensus 465 ~~~~~l~~~dl~tg~~~~ 482 (789)
++. |..+|+.+++...
T Consensus 622 ~~~--i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 622 EHG--IKIWDLESKSIVE 637 (694)
T ss_dssp TTE--EEEEETTTTEEEE
T ss_pred CCC--EEEEECCCCCChh
Confidence 333 6667887877544
No 326
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.10 E-value=7.9e-09 Score=109.32 Aligned_cols=248 Identities=15% Similarity=0.107 Sum_probs=134.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
..+....|||||++|+...... ...+|. .+............ .....++|+++.|+..+.+...
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~s~s~d~~~ 152 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDG-----TLRLWDLTTGTTTRRFVGHTKD---------VLSVAFSSDNRQIVSGSRDKTI 152 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC---------EEEEEECTTSSCEEEEETTSCE
T ss_pred CCEEEEEECCCCCEEEEEcccc-----cceEEeecccceeeeecCCCCc---------eeEEEEeecCccceeecCCCeE
Confidence 4588899999999999876654 455553 22222222221111 1567899999999887765432
Q ss_pred CCCCccCCCCC-CCCCCcCCCCCCCcceeeCCcccc--cCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCC
Q 003886 232 SKPTFSLGSTK-GGSSDKDCNSWKGQGDWEEDWGET--YAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 308 (789)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~g~~--~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~ 308 (789)
. .|+..... .......+........|.++.... ..+..+..|.+||+.+++..... ......+..++|+|||+.
T Consensus 153 ~--~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~-~~h~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 153 K--LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH-IGHTGYLNTVTVSPDGSL 229 (340)
T ss_dssp E--EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSE
T ss_pred E--EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe-cCCCCcEEEEEECCCCCE
Confidence 2 22211100 001111122222223344432221 23345678999999988765442 233446788999999997
Q ss_pred CccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEE
Q 003886 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 388 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~ 388 (789)
|+..+ .+..|.++|+ .+............+....|+|++..++-
T Consensus 230 ----l~s~s---------------~Dg~i~iwd~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 273 (340)
T 4aow_A 230 ----CASGG---------------KDGQAMLWDL-----------------NEGKHLYTLDGGDIINALCFSPNRYWLCA 273 (340)
T ss_dssp ----EEEEE---------------TTCEEEEEET-----------------TTTEEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred ----EEEEe---------------CCCeEEEEEe-----------------ccCceeeeecCCceEEeeecCCCCceeec
Confidence 66554 2336788887 33333222223345778899999875543
Q ss_pred EecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeE
Q 003886 389 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (789)
Q Consensus 389 ~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (789)
+.+ ..|.+||+.++......... .... ...+ ....+..+.|+|||+.| +++..++..
T Consensus 274 -~~d-----------~~i~iwd~~~~~~~~~~~~~--~~~~-------~~~~-h~~~v~~l~~s~dg~~l-~sgs~Dg~v 330 (340)
T 4aow_A 274 -ATG-----------PSIKIWDLEGKIIVDELKQE--VIST-------SSKA-EPPQCTSLAWSADGQTL-FAGYTDNLV 330 (340)
T ss_dssp -EET-----------TEEEEEETTTTEEEEEECCC----------------C-CCCCEEEEEECTTSSEE-EEEETTSCE
T ss_pred -cCC-----------CEEEEEECCCCeEEEecccc--ceee-------eccC-CCCCEEEEEECCCCCEE-EEEeCCCEE
Confidence 322 25899998764332110000 0000 0000 11134567899999865 566667777
Q ss_pred EEEEEECCCCc
Q 003886 469 VIISVNVSSGE 479 (789)
Q Consensus 469 ~l~~~dl~tg~ 479 (789)
.||.+. +|+
T Consensus 331 ~iW~~~--tGt 339 (340)
T 4aow_A 331 RVWQVT--IGT 339 (340)
T ss_dssp EEEEEE--C--
T ss_pred EEEeCC--CcC
Confidence 776554 664
No 327
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.10 E-value=7.3e-11 Score=131.93 Aligned_cols=134 Identities=19% Similarity=0.204 Sum_probs=94.2
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-hhHHHHHHHHHCC-cEEEEEcCC-CCCCCCchhhccC--C
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVG-YSLLIVNYR-GSLGFGEEALQSL--P 644 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~~~la~~G-y~V~~~d~r-Gs~G~G~~~~~~~--~ 644 (789)
+.|+..+. ++.|. ...++.|+||++|||+...... ........|+++| ++|+.+||| |..||+....... .
T Consensus 81 ~edcl~l~--v~~P~--~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~ 156 (498)
T 2ogt_A 81 SEDGLYLN--IWSPA--ADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAY 156 (498)
T ss_dssp BSCCCEEE--EEESC--SSSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGG
T ss_pred CCCCcEEE--EEecC--CCCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccc
Confidence 44666565 56775 2456799999999998543222 2222356777776 999999999 3334544321100 1
Q ss_pred CCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhC--CCceeEEEEeCCccc
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 707 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~--p~~~~a~v~~~pv~~ 707 (789)
...+...+.|+.++++|+.++. ..|++||+|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 157 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 157 AQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 2234455899999999998862 36899999999999999999888753 458999999999764
No 328
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.10 E-value=5.5e-10 Score=112.58 Aligned_cols=163 Identities=12% Similarity=0.124 Sum_probs=102.6
Q ss_pred cEEEEEcCCCCCCCchhhHHHHHHHHHCC---cEEEEEcCCCCCCCCchhhc-------c-----CCCC-CC----cccH
Q 003886 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVG---YSLLIVNYRGSLGFGEEALQ-------S-----LPGK-VG----SQDV 652 (789)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G---y~V~~~d~rGs~G~G~~~~~-------~-----~~~~-~~----~~~~ 652 (789)
+.||++||.++ ....|......|++.| +.|+.+|.++. |.+..... . ...+ -+ ....
T Consensus 5 ~pvv~iHG~~~--~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~-G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 5 APVIMVPGSSA--SQNRFDSLITELGKETPKKHSVLKLTVQTD-GTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp CCEEEECCCGG--GHHHHHHHHHHHHHHSSSCCCEEEEEECTT-SCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCEEEECCCCC--CHHHHHHHHHHHHhcCCCCceEEEEEEecC-CeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 45778999655 3667888888998876 67887776641 12111000 0 0000 11 1124
Q ss_pred HHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-----CCceeEEEEeCCccchhhhhcCCCCCcchhhhhcc
Q 003886 653 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (789)
Q Consensus 653 ~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-----p~~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~ 727 (789)
+++.++++++.++ .+.+++.++||||||.++..++.++ +++++.+|+.++..+-... . +.
T Consensus 82 ~~l~~~~~~l~~~--~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~----~-~~-------- 146 (250)
T 3lp5_A 82 VWLNTAFKALVKT--YHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMEST----S-TT-------- 146 (250)
T ss_dssp HHHHHHHHHHHTT--SCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCC----C-SS--------
T ss_pred HHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccc----c-cc--------
Confidence 6777788888776 4568999999999999999988876 6789999988775532110 0 00
Q ss_pred CccccccCCCCChhhHHHHHhcCccccCCCCCCCEEEEEeC----CCCCCChHHHHHHHHHCC
Q 003886 728 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGA----QDLRVPVSNGLQVIYHIP 786 (789)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~----~D~~vp~~~~~~l~~~l~ 786 (789)
... .....+.+. ...+.+ ++|+|+|+|+ .|..||...+..+...++
T Consensus 147 ---------~~~-~~~~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~ 196 (250)
T 3lp5_A 147 ---------AKT-SMFKELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQ 196 (250)
T ss_dssp ---------CCC-HHHHHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHT
T ss_pred ---------ccC-HHHHHHHhc--cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhc
Confidence 000 111222211 122333 6899999999 999999999977665554
No 329
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.09 E-value=2e-10 Score=118.66 Aligned_cols=116 Identities=20% Similarity=0.275 Sum_probs=83.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCccc
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~ 651 (789)
+|..++.... +. +...|.||++||.+.+ ...|......|+ .+|.|+++|+|| +|.+... . ....
T Consensus 12 ~g~~l~y~~~-~~----G~~~p~vvllHG~~~~--~~~w~~~~~~L~-~~~rvia~DlrG---hG~S~~~--~---~~~~ 75 (276)
T 2wj6_A 12 FDNKLSYIDN-QR----DTDGPAILLLPGWCHD--HRVYKYLIQELD-ADFRVIVPNWRG---HGLSPSE--V---PDFG 75 (276)
T ss_dssp TTEEEEEEEC-CC----CCSSCEEEEECCTTCC--GGGGHHHHHHHT-TTSCEEEECCTT---CSSSCCC--C---CCCC
T ss_pred CCeEEEEEEe-cC----CCCCCeEEEECCCCCc--HHHHHHHHHHHh-cCCEEEEeCCCC---CCCCCCC--C---CCCC
Confidence 5666654332 11 2234889999997664 567877777776 469999999998 6665421 1 1234
Q ss_pred HHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC-CCceeEEEEeCCc
Q 003886 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPL 705 (789)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~-p~~~~a~v~~~pv 705 (789)
++++.+.+..+++. ++.+++.|+|||+||.+++.++.++ |++++++|+.++.
T Consensus 76 ~~~~a~dl~~ll~~--l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~ 128 (276)
T 2wj6_A 76 YQEQVKDALEILDQ--LGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWL 128 (276)
T ss_dssp HHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEeccc
Confidence 55665555555554 3457899999999999999999999 9999999998763
No 330
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.09 E-value=1.3e-08 Score=109.28 Aligned_cols=244 Identities=11% Similarity=0.090 Sum_probs=142.0
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCCC--CCeEEEEecCCCCCC
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESP 179 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~ 179 (789)
.++|||++++... ..+.+.++++.....+. ..+.... ..+...+|||+ |++|+.....+
T Consensus 18 ~~s~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~l~s~~~dg---- 79 (379)
T 3jrp_A 18 VLDYYGKRLATCS---------SDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSYDG---- 79 (379)
T ss_dssp EECSSSSEEEEEE---------TTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEEETTS----
T ss_pred EEcCCCCEEEEEE---------CCCcEEEEecCCCcceeeeEecCCC-----CcEEEEEeCCCCCCCEEEEeccCC----
Confidence 4579999887542 12345555553222221 2222222 45888999988 89988876543
Q ss_pred eEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCC--CCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCC
Q 003886 180 IQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (789)
Q Consensus 180 ~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (789)
.+.+| ..++...+.... ...+.+ ..+.|+|+ ++.|+..+.+
T Consensus 80 -~v~iwd~~~~~~~~~~~~~-~~~~~v------~~~~~~~~~~~~~l~~~~~d--------------------------- 124 (379)
T 3jrp_A 80 -KVLIWKEENGRWSQIAVHA-VHSASV------NSVQWAPHEYGPLLLVASSD--------------------------- 124 (379)
T ss_dssp -CEEEEEEETTEEEEEEEEC-CCSSCE------EEEEECCGGGCSEEEEEETT---------------------------
T ss_pred -EEEEEEcCCCceeEeeeec-CCCcce------EEEEeCCCCCCCEEEEecCC---------------------------
Confidence 34555 334322333222 122223 78999999 8888876443
Q ss_pred cceeeCCcccccCCccCceEEEEEccCCce---EeccCCCCCCccceEEEee-------------CCCCCccEEEEEeec
Q 003886 256 QGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVFVGWS 319 (789)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~---~~l~~~~~~~~~~~~~wSP-------------Dg~~~~~~l~f~~~~ 319 (789)
..|.+||+.++.. ..+ ......+..+.|+| |++. |+..+
T Consensus 125 -----------------~~i~v~d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~-- 179 (379)
T 3jrp_A 125 -----------------GKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG-- 179 (379)
T ss_dssp -----------------SEEEEEECCTTSCCCEEEE--ECCTTCEEEEEECCCC----------CTTCE----EEEEE--
T ss_pred -----------------CcEEEEecCCCCceeeEEe--cCCCCceEEEEEcCccccccccccCCCCCCE----EEEEe--
Confidence 5688899887632 222 23344677899999 5776 66554
Q ss_pred CCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCC---CCEEEEEecCCCCC
Q 003886 320 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPD---GKFLVFLSAKSSVD 396 (789)
Q Consensus 320 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpD---G~~la~~s~~~~~~ 396 (789)
.+..|+++|+.... ........+..+...+..++|+|| |+.|+..+.+.
T Consensus 180 -------------~dg~i~i~d~~~~~------------~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg--- 231 (379)
T 3jrp_A 180 -------------ADNLVKIWKYNSDA------------QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR--- 231 (379)
T ss_dssp -------------TTSCEEEEEEETTT------------TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS---
T ss_pred -------------CCCeEEEEEecCCC------------cceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC---
Confidence 22357777772100 000122355566777889999999 78887766543
Q ss_pred CCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEEC
Q 003886 397 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 475 (789)
Q Consensus 397 ~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl 475 (789)
.|.+||+.++...... .+.. . .. ....+..+.|+|||+.|+ ++..++...+|.++.
T Consensus 232 --------~i~iwd~~~~~~~~~~----~~~~---~---~~----~~~~v~~~~~s~~g~~l~-~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 232 --------TCIIWTQDNEQGPWKK----TLLK---E---EK----FPDVLWRASWSLSGNVLA-LSGGDNKVTLWKENL 287 (379)
T ss_dssp --------CEEEEEESSTTSCCEE----EESS---S---SC----CSSCEEEEEECSSSCCEE-EEESSSSEEEEEEEE
T ss_pred --------EEEEEeCCCCCcccee----eeec---c---cc----CCCcEEEEEEcCCCCEEE-EecCCCcEEEEeCCC
Confidence 4889998775421100 0000 0 00 011344678999999664 445577788887774
No 331
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.09 E-value=2.5e-11 Score=136.48 Aligned_cols=135 Identities=18% Similarity=0.174 Sum_probs=92.3
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-hhHHHHHHH-HHCCcEEEEEcCC-CCCCCCchhhccCCCC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFL-SSVGYSLLIVNYR-GSLGFGEEALQSLPGK 646 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~~~l-a~~Gy~V~~~d~r-Gs~G~G~~~~~~~~~~ 646 (789)
+.|++.+ .++.|.+....++.|+||++|||+...... .+....... ...|++|+.+||| |..||+........+
T Consensus 82 ~edcl~l--~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~- 158 (522)
T 1ukc_A 82 SEDCLFI--NVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNG- 158 (522)
T ss_dssp ESCCCEE--EEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSS-
T ss_pred CCcCCEE--EEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccC-
Confidence 3455444 577887544556789999999998654332 222211111 2569999999999 444555432211111
Q ss_pred CCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhC----CCceeEEEEeCCccc
Q 003886 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCN 707 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~----p~~~~a~v~~~pv~~ 707 (789)
.+...+.|+.++++|+.++. ..|++||+|+|+|.||+++..++... +.+|+++|+.+|...
T Consensus 159 ~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 159 DLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 22344899999999998863 36999999999999999888776643 568999999999753
No 332
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.08 E-value=4.8e-10 Score=114.20 Aligned_cols=174 Identities=16% Similarity=0.120 Sum_probs=101.8
Q ss_pred cEEEEEcCCCCCCCchhhHHHHHHHHHCCcE---E----------EEEcCCCCCCCCchhhc-cC-CCCCC-cccHHHHH
Q 003886 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS---L----------LIVNYRGSLGFGEEALQ-SL-PGKVG-SQDVNDVL 656 (789)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~---V----------~~~d~rGs~G~G~~~~~-~~-~~~~~-~~~~~D~~ 656 (789)
+.||++||.+++ ...|......|+++|+. + +.+|.++..+.+..... .. ..... ....+|+.
T Consensus 4 ~pvvllHG~~~~--~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 4 IPIILIHGSGGN--ASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCEEEECCTTCC--TTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCC--cchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 457899997664 55688888899988753 3 33332211110110000 00 00111 11245666
Q ss_pred HHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCC-----ceeEEEEeCCccchhhhhcCCCCCcchhhhhccCccc
Q 003886 657 TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 731 (789)
Q Consensus 657 ~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (789)
++++.+.++ .+.+++.++||||||.+++.++.++|+ +++++|+.++..+......... .+.
T Consensus 82 ~~i~~l~~~--~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~--------~~~---- 147 (254)
T 3ds8_A 82 IAMEDLKSR--YGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGM--------DLS---- 147 (254)
T ss_dssp HHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCS--------CTT----
T ss_pred HHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccccc--------ccc----
Confidence 667887776 234789999999999999999999988 8999999998654321110000 000
Q ss_pred cccCCCCC-hhhHHHHHhcCccccCCCCCCCEEEEEeC------CCCCCChHHHHHHHHHCCC
Q 003886 732 DSFTESPS-VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 732 ~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~P~Lii~G~------~D~~vp~~~~~~l~~~l~~ 787 (789)
+.+.+. ......+... ...+.+ ++|+|+|||+ .|.+||+..+..+...+++
T Consensus 148 --~~~~p~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~ 205 (254)
T 3ds8_A 148 --FKKLPNSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPG 205 (254)
T ss_dssp --CSSCSSCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBT
T ss_pred --cccCCcchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhc
Confidence 001111 1111111111 122333 6899999999 9999999999888766653
No 333
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.3e-08 Score=106.26 Aligned_cols=271 Identities=14% Similarity=0.093 Sum_probs=154.3
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
+.+...+| |+|++|+.....+ .+.+| ..++........ .+.+ ..+.|+||++.|+..+.+...
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~---~~~v------~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDG-----TVRLWSKDDQWLGTVVYTG---QGFL------NSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTS-----EEEEEEESSSEEEEEEEEC---SSCE------EEEEEETTTTEEEEEETTSCE
T ss_pred CCcEEEEe-cCCCEEEEEEcCC-----cEEEEECCCCEEEEEeecC---CccE------EEEEECCCCCEEEEecCCCeE
Confidence 45778899 9999998876553 45666 333333333321 1222 789999999999988766532
Q ss_pred CCCCccCCCC---CCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEee-CCC
Q 003886 232 SKPTFSLGST---KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNE 307 (789)
Q Consensus 232 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP-Dg~ 307 (789)
. .|..... ........+........| +....+++..+..|.+|| .......+ ......+..+.|+| +++
T Consensus 84 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~ 156 (313)
T 3odt_A 84 N--GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNL--QAHNASVWDAKVVSFSEN 156 (313)
T ss_dssp E--EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEE--ECCSSCEEEEEEEETTTT
T ss_pred E--EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEec--ccCCCceeEEEEccCCCC
Confidence 2 1221111 111112222222223344 223444555678899999 23333334 23344677889999 777
Q ss_pred CCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCC-CCCccCcceecCCCCEE
Q 003886 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFL 386 (789)
Q Consensus 308 ~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l 386 (789)
. |+..+ ....|.++|. . .....+.. +...+....|+|+|+ |
T Consensus 157 ~----l~~~~---------------~d~~i~i~d~-----------------~-~~~~~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 157 K----FLTAS---------------ADKTIKLWQN-----------------D-KVIKTFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------T-EEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred E----EEEEE---------------CCCCEEEEec-----------------C-ceEEEEeccCcccEEEEEEcCCCe-E
Confidence 5 55554 2235777774 2 23334443 566688899999998 6
Q ss_pred EEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCC
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (789)
+..+.+ ..|++||+.+++....... ....+..+.|+|||+ | +++..++
T Consensus 199 ~~~~~d-----------g~i~i~d~~~~~~~~~~~~-------------------~~~~i~~~~~~~~~~-l-~~~~~dg 246 (313)
T 3odt_A 199 ISCSND-----------GLIKLVDMHTGDVLRTYEG-------------------HESFVYCIKLLPNGD-I-VSCGEDR 246 (313)
T ss_dssp EEEETT-----------SEEEEEETTTCCEEEEEEC-------------------CSSCEEEEEECTTSC-E-EEEETTS
T ss_pred EEccCC-----------CeEEEEECCchhhhhhhhc-------------------CCceEEEEEEecCCC-E-EEEecCC
Confidence 555433 3699999877543211000 001244678999994 4 4444455
Q ss_pred eEEEEEEECCCCcEEEecCCC-CCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 467 SQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 467 ~~~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
. |..+|+.+++.......+ ..+....+++++. ++. .+... .+.+.++.++
T Consensus 247 ~--v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~dg---~i~iw~~~~~ 297 (313)
T 3odt_A 247 T--VRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIV-GSSDN---LVRIFSQEKS 297 (313)
T ss_dssp E--EEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEE-EETTS---CEEEEESCGG
T ss_pred E--EEEEECCCCceeEEEeccCceEEEEEEccCCC-EEE-EeCCC---cEEEEeCCCC
Confidence 4 555678788766544333 3455567888887 333 33333 3677776543
No 334
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.08 E-value=3.8e-09 Score=121.79 Aligned_cols=242 Identities=11% Similarity=0.064 Sum_probs=146.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCC----ceeEEEecCCCcccc-ccCCCcccceeecC--CCCEEEE
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQS----QLEKEFHVPQTVHGS-VYADGWFEGISWNS--DETLIAY 224 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~----~~~~~~~~~~~~~g~-v~~d~~~~~~~wSp--Dg~~la~ 224 (789)
+.+...+|||||++||+..+. ...+| .++ +..+.+.. ..+. | ..++||| ||+.||.
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~------~v~v~~~~~~~~~~~~~~~~~~---h~~~~v------~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGK------SAFVRCLDDGDSKVPPVVQFTG---HGSSVV------TTVKFSPIKGSQYLCS 83 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETT------EEEEEECCSSCCSSCSEEEECT---TTTSCE------EEEEECSSTTCCEEEE
T ss_pred CceeEEEECCCCCEEEEecCC------eEEEEECCCCCCccccceEEec---CCCceE------EEEEECcCCCCCEEEE
Confidence 457789999999999998732 34555 333 33333321 1222 3 7899999 9999987
Q ss_pred EeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCC------ceEeccC-CCCCCcc
Q 003886 225 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG------EVQAVKG-IPKSLSV 297 (789)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g------~~~~l~~-~~~~~~~ 297 (789)
...+ ..|.+||+.++ +...+.. ......+
T Consensus 84 ~~~d--------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v 119 (615)
T 1pgu_A 84 GDES--------------------------------------------GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI 119 (615)
T ss_dssp EETT--------------------------------------------SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred ecCC--------------------------------------------CEEEEEeCCCCcccccccccccchhhcccccE
Confidence 6432 56888998655 2222110 1234467
Q ss_pred ceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcc
Q 003886 298 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFP 377 (789)
Q Consensus 298 ~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p 377 (789)
..++|+|||+. |+..+...+ ....|+.+|. +.....+..+...+...
T Consensus 120 ~~~~~s~~~~~----l~~~~~~~~-----------~~~~v~~~d~------------------~~~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 120 SDISWDFEGRR----LCVVGEGRD-----------NFGVFISWDS------------------GNSLGEVSGHSQRINAC 166 (615)
T ss_dssp EEEEECTTSSE----EEEEECCSS-----------CSEEEEETTT------------------CCEEEECCSCSSCEEEE
T ss_pred EEEEEeCCCCE----EEEeccCCC-----------CccEEEEEEC------------------CCcceeeecCCccEEEE
Confidence 89999999998 887763321 1235777763 34456677777788899
Q ss_pred eecCCCCE-EEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC-C
Q 003886 378 RFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD-G 455 (789)
Q Consensus 378 ~~SpDG~~-la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D-g 455 (789)
+|+|||+. |+..+.+ ..+.+||+.++..... ..... .. + ..+..+.|+|| |
T Consensus 167 ~~~~~~~~~l~~~~~d-----------~~v~vwd~~~~~~~~~----------~~~~~-~~--~---~~v~~~~~~~~~~ 219 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDD-----------GSVVFYQGPPFKFSAS----------DRTHH-KQ--G---SFVRDVEFSPDSG 219 (615)
T ss_dssp EECSSSSCEEEEEETT-----------TEEEEEETTTBEEEEE----------ECSSS-CT--T---CCEEEEEECSTTC
T ss_pred EECCCCCcEEEEEeCC-----------CcEEEEeCCCcceeee----------ecccC-CC--C---ceEEEEEECCCCC
Confidence 99999984 5544433 3689999766433110 00000 00 0 02346789999 8
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCcEEEec-----CCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 456 CTMLLSSIWGSSQVIISVNVSSGELLRIT-----PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 456 ~~l~~~~~~~~~~~l~~~dl~tg~~~~lt-----~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
+.|+ ++..++. |..+|+.+++..... .....+....++ +++.++....+ ..+.+.++..
T Consensus 220 ~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----~~i~~wd~~~ 283 (615)
T 1pgu_A 220 EFVI-TVGSDRK--ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD----ATIRVWDVTT 283 (615)
T ss_dssp CEEE-EEETTCC--EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT----SEEEEEETTT
T ss_pred CEEE-EEeCCCe--EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC----CcEEEEECCC
Confidence 8654 4444444 555688788776655 233344455677 77766655433 2366666543
No 335
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.07 E-value=1.5e-08 Score=105.63 Aligned_cols=244 Identities=12% Similarity=0.126 Sum_probs=139.5
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCC-ccceeecCCcceecccEEEEeCCC--CCeEEEEecCCCCCCe
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPI 180 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~~ 180 (789)
.+|||++++-.. ..+.+.++++.....+ ...+.... +.+...+|+|+ |+.||..+.++
T Consensus 17 ~s~~g~~las~s---------~D~~v~iw~~~~~~~~~~~~l~gH~-----~~V~~v~~s~~~~g~~l~s~s~D~----- 77 (297)
T 2pm7_B 17 MDYYGKRMATCS---------SDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSYDG----- 77 (297)
T ss_dssp ECTTSSEEEEEE---------TTSCEEEEEBCSSCBCCCEEECCCS-----SCEEEEEECCGGGCSEEEEEETTT-----
T ss_pred ECCCCCEEEEEe---------CCCEEEEEecCCCCcEEEEEEcccc-----CCeEEEEecCCCcCCEEEEEcCCC-----
Confidence 469999876432 2345666666432222 22333332 45888999974 88888877654
Q ss_pred EEEEec--CCceeEEEecCCCccccccCCCcccceeecCC--CCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCc
Q 003886 181 QFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 256 (789)
Q Consensus 181 ~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (789)
...+|+ .++...+.... ...+.| ..+.|+|+ |+.|+..+.+
T Consensus 78 ~v~iWd~~~~~~~~~~~~~-~h~~~v------~~v~~~p~~~g~~l~s~s~d---------------------------- 122 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHA-VHSASV------NSVQWAPHEYGPMLLVASSD---------------------------- 122 (297)
T ss_dssp EEEEEEBSSSCBCCCEEEC-CCSSCE------EEEEECCGGGCSEEEEEETT----------------------------
T ss_pred EEEEEEcCCCceEEEEEee-cCCCce------eEEEeCcCCCCcEEEEEECC----------------------------
Confidence 566773 33222222211 111222 78999998 7887765433
Q ss_pred ceeeCCcccccCCccCceEEEEEccCCc---eEeccCCCCCCccceEEEeeCC-------------CCCccEEEEEeecC
Q 003886 257 GDWEEDWGETYAGKRQPSLFVININSGE---VQAVKGIPKSLSVGQVVWAPLN-------------EGLHQYLVFVGWSS 320 (789)
Q Consensus 257 ~~~~~d~g~~~~~~~~~~l~v~d~~~g~---~~~l~~~~~~~~~~~~~wSPDg-------------~~~~~~l~f~~~~~ 320 (789)
..|.+||+.++. ...+ ......+..+.|+|++ +. |+..+
T Consensus 123 ----------------~~v~~wd~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~----l~sgs--- 177 (297)
T 2pm7_B 123 ----------------GKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG--- 177 (297)
T ss_dssp ----------------SEEEEEEBCSSSCBCCEEE--ECCSSCEEEEEECCCC------------CCE----EEEEE---
T ss_pred ----------------CcEEEEEecCCCceeeeee--ecccCccceEeecCCcccccccCCCCCCcce----EEEEc---
Confidence 567888887653 2222 1233457788999984 33 44443
Q ss_pred CceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC----CeeecCCCCCccCcceecCCC---CEEEEEecCC
Q 003886 321 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL----PVVNLTESISSAFFPRFSPDG---KFLVFLSAKS 393 (789)
Q Consensus 321 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~----~~~~Lt~~~~~~~~p~~SpDG---~~la~~s~~~ 393 (789)
.+..|.++|+. ... ....|..+...+...+||||| ++|+..+.+.
T Consensus 178 ------------~D~~v~lwd~~----------------~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 178 ------------ADNLVKIWKYN----------------SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp ------------TTSCEEEEEEE----------------TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ------------CCCcEEEEEEc----------------CCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 22356666662 111 234566777788999999996 6777666543
Q ss_pred CCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003886 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (789)
Q Consensus 394 ~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~ 473 (789)
.+.+||+.+...... ..+. . ...++ ..+..+.|+|||+.| +++..++...||..
T Consensus 230 -----------~v~iWd~~~~~~~~~----~~~~---~---~~~~~----~~v~~~~~s~~g~~l-as~~~D~~v~lw~~ 283 (297)
T 2pm7_B 230 -----------TCIIWTQDNEQGPWK----KTLL---K---EEKFP----DVLWRASWSLSGNVL-ALSGGDNKVTLWKE 283 (297)
T ss_dssp -----------CEEEEEESSTTSCCE----EEES---S---SSCCS----SCEEEEEECSSSCCE-EEEETTSCEEEEEE
T ss_pred -----------cEEEEEeCCCCCccc----eeee---e---cccCC----CcEEEEEECCCCCEE-EEEcCCCcEEEEEE
Confidence 488888765321100 0000 0 00111 124467899999855 56667788888887
Q ss_pred ECCCCcEE
Q 003886 474 NVSSGELL 481 (789)
Q Consensus 474 dl~tg~~~ 481 (789)
+. .|+..
T Consensus 284 ~~-~g~w~ 290 (297)
T 2pm7_B 284 NL-EGKWE 290 (297)
T ss_dssp CT-TSCEE
T ss_pred CC-CCcEE
Confidence 65 34443
No 336
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.07 E-value=8.6e-08 Score=102.93 Aligned_cols=122 Identities=8% Similarity=-0.012 Sum_probs=71.7
Q ss_pred cceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeecc--CCCCCccccccCCCCCcccc
Q 003886 376 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA--EGDCFPGLYSSSILSNPWLS 453 (789)
Q Consensus 376 ~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~--~~~~f~g~~~~~~~~~~ws~ 453 (789)
...++|||+.++|.+.. ..++++|+.++....+ ....+.... .....| .....+.++|
T Consensus 204 ~~~~~~~g~~~~~~~~~-----------~~v~v~d~~~~~~~~~-----~~~~~~~~~~~~~~~~p----~g~~~~a~~~ 263 (361)
T 2oiz_A 204 FIAPALDKDKAHFVSYY-----------GNVYSADFSGDEVKVD-----GPWSLLNDEDKAKNWVP----GGYNLVGLHR 263 (361)
T ss_dssp CSCCEECSSEEEEEBTT-----------SEEEEEECSSSSCEEE-----EEEESCCHHHHHTTCEE----CCSSCEEEET
T ss_pred EEEecccCCEEEEEeCC-----------CeEEEEEecCCCceec-----ccccccCcccccccccc----CCeeEEEEec
Confidence 34558999998887743 2599999876543211 000000000 000001 1122357899
Q ss_pred CCCEEEEEEEeC--------CeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 454 DGCTMLLSSIWG--------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 454 Dg~~l~~~~~~~--------~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
|++++|+..... ....++.+|+.++++..-.+... .....+++||++|+. ... ..+.++|..+.
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v-~n~----~~v~v~D~~t~ 335 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLT-LDG----GNVNVYDISQP 335 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEE-ECS----SCEEEEECSSS
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEE-eCC----CeEEEEECCCC
Confidence 999998765411 23579999999988765444433 556789999996654 332 55888886543
No 337
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.06 E-value=1.3e-07 Score=102.55 Aligned_cols=299 Identities=11% Similarity=0.052 Sum_probs=157.5
Q ss_pred CCCceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCCCCCeEEEEecC------CCCC
Q 003886 106 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNP------ENES 178 (789)
Q Consensus 106 pdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~------~~~~ 178 (789)
+|++++ |+.++.. .+.. ..+..++..+ .+. ..+..+. .. .+++||||++|+..... +...
T Consensus 82 ~~~~~v-yV~n~~~--~~~~-~~VsVID~~t--~~vv~~I~vG~------~P-gia~SpDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 82 PDARRV-YIQDPAH--FAAI-TQQFVIDGST--GRILGMTDGGF------LP-HPVAAEDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCTTEE-EEEECTT--TCSS-EEEEEEETTT--TEEEEEEEECS------SC-EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCEE-EEECCCc--CCCC-CeEEEEECCC--CEEEEEEECCC------CC-ceEECCCCCEEEEEeccccccccCCCC
Confidence 788776 6665431 0001 5677766522 222 2222222 23 78999999998776421 0012
Q ss_pred CeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcc
Q 003886 179 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (789)
Q Consensus 179 ~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (789)
..+..++ ...+..+.+.++....- -....-.++.+||||++|+.....
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r~--~~g~~P~~~~~spDGk~lyV~n~~----------------------------- 197 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPRF--LVGTYQWMNALTPDNKNLLFYQFS----------------------------- 197 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCC--CBSCCGGGSEECTTSSEEEEEECS-----------------------------
T ss_pred CEEEEEECCCCcEEEEEECCCcccc--ccCCCcceEEEcCCCCEEEEEecC-----------------------------
Confidence 2466777 56666666665411000 000001588999999987665321
Q ss_pred eeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcce
Q 003886 258 DWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (789)
Q Consensus 258 ~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l 337 (789)
....|.++|+.++++..-...++ .....|+|+. .++.... ...+
T Consensus 198 -------------~~~~VsVID~~t~kvv~~I~v~g-----~~~~~p~g~~----~~v~~~~--------------dG~~ 241 (426)
T 3c75_H 198 -------------PAPAVGVVDLEGKTFDRMLDVPD-----CYHIFPASPT----VFYMNCR--------------DGSL 241 (426)
T ss_dssp -------------SSCEEEEEETTTTEEEEEEECCS-----EEEEEEEETT----EEEEEET--------------TSSE
T ss_pred -------------CCCeEEEEECCCCeEEEEEEcCC-----ceeeccCCCc----EEEEEcC--------------CCCE
Confidence 13679999999988754311211 1344566655 4333211 1234
Q ss_pred EEEecccccchhhhhhhhcCCCCCCCee-e----cCCCCC-ccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeec
Q 003886 338 YAVRVSLYKSEASELELKESSSEDLPVV-N----LTESIS-SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 411 (789)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~----Lt~~~~-~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~ 411 (789)
..+++ .+++.. . +.-... ....+.|++||+.++|.+.. ..++++|+
T Consensus 242 ~~V~~-----------------~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~-----------g~V~ViD~ 293 (426)
T 3c75_H 242 ARVDF-----------------ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT-----------GKIFQADL 293 (426)
T ss_dssp EEEEC-----------------CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT-----------SEEEEEEE
T ss_pred EEEEC-----------------CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC-----------CcEEEEec
Confidence 45554 122211 1 111111 12346789999999988742 26999998
Q ss_pred CCCCCCCcccceeeEEeeeeccC-C-CCCccccccCCCCCccccCCCEEEEEEEeC-------CeEEEEEEECCCCcEEE
Q 003886 412 PTNGNFSSLEKIVDVIPVVQCAE-G-DCFPGLYSSSILSNPWLSDGCTMLLSSIWG-------SSQVIISVNVSSGELLR 482 (789)
Q Consensus 412 ~~~~~~~~t~~~~~v~~~~~~~~-~-~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~-------~~~~l~~~dl~tg~~~~ 482 (789)
.++....+. . ..+..... . ...| .....+.+++||+++|+..... +...|+.+|+.+.++..
T Consensus 294 ~~~~~~v~~-~----~~~~~~~~i~~g~~p----~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~ 364 (426)
T 3c75_H 294 TAEGATFRA-P----IEALTEAERADDWRP----GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERIN 364 (426)
T ss_dssp CSSCEEECC-C----EESSCTTTGGGTEEE----CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE
T ss_pred cCCceEEee-e----eeecccccccccccc----CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEE
Confidence 664432110 0 00000000 0 0001 1122457899999998876532 24679999999988664
Q ss_pred ecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 483 ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 483 lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
-.+.........+++||+.++|+.... -..+.++|..+.
T Consensus 365 ~I~vg~~P~gia~spDg~~~lyv~n~~--s~~VsVID~~t~ 403 (426)
T 3c75_H 365 KIELGHEIDSINVSQDAEPLLYALSAG--TQTLHIYDAATG 403 (426)
T ss_dssp EEEEEEEECEEEECCSSSCEEEEEETT--TTEEEEEETTTC
T ss_pred EEECCCCcCeEEEccCCCEEEEEEcCC--CCeEEEEECCCC
Confidence 333222234468899999444444421 234888886643
No 338
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.05 E-value=4.6e-08 Score=103.56 Aligned_cols=240 Identities=15% Similarity=0.189 Sum_probs=129.8
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCc------eeEEEecCCCccccccCCCcccceeecCCCCEEEEEee
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ------LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~ 227 (789)
..+...+|||+|+.||..+..+ ...+|+... ..+....-.+..+.| ..++|||||+.||..+.
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V------~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEESADRTFEMDLLAIIEGHENEV------KGVAWSNDGYYLATCSR 127 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEEC-------CCCEEEEEEC----CE------EEEEECTTSCEEEEEET
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----cEEEEEcccCcCccccceeEEEEcCCCCcE------EEEEECCCCCEEEEEeC
Confidence 4588899999999998876543 355662110 111111111222333 78999999999987654
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEcc-CCc----eEeccCCCCCCccceEEE
Q 003886 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGE----VQAVKGIPKSLSVGQVVW 302 (789)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~----~~~l~~~~~~~~~~~~~w 302 (789)
+ ..|.+||+. +++ ...+ ......+..+.|
T Consensus 128 D--------------------------------------------~~v~iwd~~~~~~~~~~~~~~--~~h~~~v~~v~~ 161 (330)
T 2hes_X 128 D--------------------------------------------KSVWIWETDESGEEYECISVL--QEHSQDVKHVIW 161 (330)
T ss_dssp T--------------------------------------------SCEEEEECCTTCCCCEEEEEE--CCCSSCEEEEEE
T ss_pred C--------------------------------------------CEEEEEeccCCCCCeEEEEEe--ccCCCceEEEEE
Confidence 3 467888884 322 1223 223346788999
Q ss_pred eeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCC-CCeeecCCCCCccCcceecC
Q 003886 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFPRFSP 381 (789)
Q Consensus 303 SPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt~~~~~~~~p~~Sp 381 (789)
+||++. |+..+. +..|.++|+.. .. .....+..+...+....|+|
T Consensus 162 ~p~~~~----l~s~s~---------------D~~i~iW~~~~---------------~~~~~~~~~~~h~~~v~~~~~~~ 207 (330)
T 2hes_X 162 HPSEAL----LASSSY---------------DDTVRIWKDYD---------------DDWECVAVLNGHEGTVWSSDFDK 207 (330)
T ss_dssp CSSSSE----EEEEET---------------TSCEEEEEEET---------------TEEEEEEEECCCSSCEEEEEECC
T ss_pred CCCCCE----EEEEcC---------------CCeEEEEECCC---------------CCeeEEEEccCCCCcEEEEEecC
Confidence 999987 666652 22466666510 11 23456667777788899999
Q ss_pred C--CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEE
Q 003886 382 D--GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 459 (789)
Q Consensus 382 D--G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~ 459 (789)
+ +..|+..+.+. .|.+||+.++.... ......... +++.....+..+.|++++ ++
T Consensus 208 ~~~~~~l~s~s~D~-----------~v~iw~~~~~~~~~--~~~~~~~~~--------~~~~h~~~v~~v~~s~~~--~l 264 (330)
T 2hes_X 208 TEGVFRLCSGSDDS-----------TVRVWKYMGDDEDD--QQEWVCEAI--------LPDVHKRQVYNVAWGFNG--LI 264 (330)
T ss_dssp SSSSCEEEEEETTS-----------CEEEEEEEEECTTS--CEEEEEEEE--------CCSCCSSCEEEEEECTTS--CE
T ss_pred CCCeeEEEEEeCCC-----------eEEEEEecCCCccc--cceeEEeee--------cccccccceEEEEEcCCC--EE
Confidence 9 66776665443 47788875532210 000011111 011111234567888665 44
Q ss_pred EEEEeCCeEEEEEEECCCCcEEE---ecCCCC--CceeEEeeec-CCEEEEEEeCC
Q 003886 460 LSSIWGSSQVIISVNVSSGELLR---ITPAES--NFSWSLLTLD-GDNIIAVSSSP 509 (789)
Q Consensus 460 ~~~~~~~~~~l~~~dl~tg~~~~---lt~~~~--~~~~~~~s~d-g~~l~~~~ss~ 509 (789)
+++..++...||.+. +++.+. ....+. .+....|++. ++.++++.+..
T Consensus 265 ~s~~~dg~v~iw~~~--~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 265 ASVGADGVLAVYEEV--DGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EEEETTSCEEEEEEE--TTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred EEEeCCCEEEEEEcC--CCceEEEeccccccccceEEEEEEecCCCceEEEEecCC
Confidence 666667777777654 564322 222222 2344567773 23344444443
No 339
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.05 E-value=1.6e-08 Score=105.21 Aligned_cols=251 Identities=14% Similarity=0.040 Sum_probs=143.5
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
...|+|+|+|+.|+++...+ .+++.++..+. .+........ ..++.++|||+.++. ..
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~---~~i~~~~~~~~-~~~~~~~~~~---------~~~l~~~~dg~l~v~--~~------- 87 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQ---NRTWAWSDDGQ-LSPEMHPSHH---------QNGHCLNKQGHLIAC--SH------- 87 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGG---TEEEEEETTSC-EEEEESSCSS---------EEEEEECTTCCEEEE--ET-------
T ss_pred ccCCeEeCCCCEEEEEeCCC---CEEEEEECCCC-eEEEECCCCC---------cceeeECCCCcEEEE--ec-------
Confidence 56899999999888876543 25776664443 3333322211 168999999984432 21
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCC---CCccceEEEeeCCCCCccE
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQY 312 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSPDg~~~~~~ 312 (789)
....|+++|..+|+.+.+..... ...+..++++|||+
T Consensus 88 -----------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~----- 127 (296)
T 3e5z_A 88 -----------------------------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS----- 127 (296)
T ss_dssp -----------------------------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-----
T ss_pred -----------------------------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-----
Confidence 12568999988888766521111 12356789999997
Q ss_pred EEEEeecCCce--eeeeee-eccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEE
Q 003886 313 LVFVGWSSETR--KLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 313 l~f~~~~~~~~--~~g~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~ 389 (789)
|+++....... ..+... .......||+++. + +..+.+..........+|||||+.| +.
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~-----------------~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~ 188 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP-----------------D-GTLSAPIRDRVKPNGLAFLPSGNLL-VS 188 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT-----------------T-SCEEEEECCCSSEEEEEECTTSCEE-EE
T ss_pred EEEECCccccccccccccccccCCCcEEEEECC-----------------C-CCEEEeecCCCCCccEEECCCCCEE-EE
Confidence 56642100000 000000 0001237999986 4 5566665555556778999999988 55
Q ss_pred ecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEE
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (789)
... ...|+++|+...+. +. ....+.. . ... .+..+.+++||+ |++.. . ..
T Consensus 189 ~~~----------~~~i~~~~~~~~g~--~~-~~~~~~~---~--~~~-------~p~~i~~d~~G~-l~v~~--~--~~ 238 (296)
T 3e5z_A 189 DTG----------DNATHRYCLNARGE--TE-YQGVHFT---V--EPG-------KTDGLRVDAGGL-IWASA--G--DG 238 (296)
T ss_dssp ETT----------TTEEEEEEECSSSC--EE-EEEEEEC---C--SSS-------CCCSEEEBTTSC-EEEEE--T--TE
T ss_pred eCC----------CCeEEEEEECCCCc--Cc-CCCeEee---C--CCC-------CCCeEEECCCCC-EEEEc--C--Ce
Confidence 432 24699999863221 10 0001110 0 011 234678999997 66655 2 35
Q ss_pred EEEEECCCCcEEEecCCCCCceeEEe-eecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 470 IISVNVSSGELLRITPAESNFSWSLL-TLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 470 l~~~dl~tg~~~~lt~~~~~~~~~~~-s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
|+++|.++..+..+..... .....| +++++.|+.+..+ .++++++.++
T Consensus 239 v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-----~l~~~~~~~~ 287 (296)
T 3e5z_A 239 VHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-----EFWSIETNVR 287 (296)
T ss_dssp EEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-----EEEEEECSCC
T ss_pred EEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-----eEEEEEcccc
Confidence 8888887555555554433 444567 4677777766543 5888887644
No 340
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.05 E-value=7.8e-09 Score=110.09 Aligned_cols=251 Identities=10% Similarity=0.066 Sum_probs=138.7
Q ss_pred cCCCC---CceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEE------EeCCCCCeEEEEec
Q 003886 103 SGNGN---GTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAV------VPSPSGSKLLVVRN 173 (789)
Q Consensus 103 ~~spd---g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~------~~SPdG~~la~~~~ 173 (789)
.++|+ |+.++... ..+.+.++++.........+.... ..+... +|||+|+.|+....
T Consensus 72 ~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~s~~~~~l~~~~~ 137 (357)
T 3i2n_A 72 TFGATSLQQRYLATGD---------FGGNLHIWNLEAPEMPVYSVKGHK-----EIINAIDGIGGLGIGEGAPEIVTGSR 137 (357)
T ss_dssp ECTTCCTTTCCEEEEE---------TTSCEEEECTTSCSSCSEEECCCS-----SCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred EEcCCCCCCceEEEec---------CCCeEEEEeCCCCCccEEEEEecc-----cceEEEeeccccccCCCccEEEEEeC
Confidence 45676 67776542 234566666633321223333222 335555 57999999998766
Q ss_pred CCCCCCeEEEEec--CCc-eeEEEecCCCc-cccccCCCccccee----ecCCCCEEEEEeecCCCCCCCccCCCCCCCC
Q 003886 174 PENESPIQFELWS--QSQ-LEKEFHVPQTV-HGSVYADGWFEGIS----WNSDETLIAYVAEEPSPSKPTFSLGSTKGGS 245 (789)
Q Consensus 174 ~~~~~~~~~~i~~--~~~-~~~~~~~~~~~-~g~v~~d~~~~~~~----wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 245 (789)
.+ .+.+|+ .++ ....+....+. ...+ ..+. |+||++.|+....+
T Consensus 138 d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~~~l~~~~~d----------------- 189 (357)
T 3i2n_A 138 DG-----TVKVWDPRQKDDPVANMEPVQGENKRDC------WTVAFGNAYNQEERVVCAGYDN----------------- 189 (357)
T ss_dssp TS-----CEEEECTTSCSSCSEEECCCTTSCCCCE------EEEEEECCCC-CCCEEEEEETT-----------------
T ss_pred CC-----eEEEEeCCCCCCcceeccccCCCCCCce------EEEEEEeccCCCCCEEEEEccC-----------------
Confidence 53 355662 332 33333321111 1111 3444 89999988876432
Q ss_pred CCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEee---CCCCCccEEEEEeecCCc
Q 003886 246 SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP---LNEGLHQYLVFVGWSSET 322 (789)
Q Consensus 246 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP---Dg~~~~~~l~f~~~~~~~ 322 (789)
..|.+||+.+++.... ......+..+.|+| +++. |+..+
T Consensus 190 ---------------------------~~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~----l~~~~----- 231 (357)
T 3i2n_A 190 ---------------------------GDIKLFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNK----LVATS----- 231 (357)
T ss_dssp ---------------------------SEEEEEETTTTEEEEE--EECSSCEEEEEESCSSSSCCE----EEEEE-----
T ss_pred ---------------------------CeEEEEECccCceeee--cCCCCceEEEEcCCCCCCCCE----EEEEC-----
Confidence 5799999999887655 33445678999999 8886 66654
Q ss_pred eeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccc
Q 003886 323 RKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSA 402 (789)
Q Consensus 323 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~ 402 (789)
....|+++|+..... ...-....+..+...+...+|+|||+.+++....+
T Consensus 232 ----------~dg~i~i~d~~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------- 281 (357)
T 3i2n_A 232 ----------LEGKFHVFDMRTQHP-----------TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA--------- 281 (357)
T ss_dssp ----------STTEEEEEEEEEEET-----------TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT---------
T ss_pred ----------CCCeEEEEeCcCCCc-----------ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC---------
Confidence 223577777621100 00000112235666788899999999444444332
Q ss_pred cceeEEeecCCCCCCCccc---------ceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003886 403 TDSLHRIDWPTNGNFSSLE---------KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (789)
Q Consensus 403 ~~~L~~~d~~~~~~~~~t~---------~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~ 473 (789)
..|++||+..+....... +....+..... ....+..+.|+|||+.|++++..++...+|.+
T Consensus 282 -g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 282 -GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL---------STQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp -SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC---------CSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred -CcEEEeecCCCcccccccCCCCccccccccceeecccc---------CCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 258888887644321100 00011111110 11235578899999988777777777777754
No 341
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.05 E-value=1.5e-10 Score=130.79 Aligned_cols=132 Identities=21% Similarity=0.184 Sum_probs=92.9
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchh-hHHHHHHHHH-CCcEEEEEcCC-CCCCCCchhhccCCCC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSS-VGYSLLIVNYR-GSLGFGEEALQSLPGK 646 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~~~~~~la~-~Gy~V~~~d~r-Gs~G~G~~~~~~~~~~ 646 (789)
+.|+..+. ++.|... ..++.|+||++|||+....... .......|++ .|++|+.+||| |..||+.... .+..
T Consensus 93 ~edcl~l~--v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~--~~~~ 167 (543)
T 2ha2_A 93 SEDCLYLN--VWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPG--SREA 167 (543)
T ss_dssp ESCCCEEE--EEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTT--CSSC
T ss_pred CCcCCeEE--EeecCCC-CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCC--CCCC
Confidence 34665555 5567532 3456899999999886543322 1223456665 79999999999 5445554310 1122
Q ss_pred CCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhC--CCceeEEEEeCCcc
Q 003886 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 706 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~--p~~~~a~v~~~pv~ 706 (789)
.+...+.|+.++++|+.++. ..|++||+|+|+|.||+++..++... +.+|+++|+.+|..
T Consensus 168 ~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 168 PGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 33445899999999998862 36999999999999999998887642 46899999999854
No 342
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.04 E-value=1.1e-09 Score=114.95 Aligned_cols=115 Identities=18% Similarity=0.135 Sum_probs=89.7
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcC--------CCCCCCCchhhccC--
Q 003886 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQSL-- 643 (789)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~--------rGs~G~G~~~~~~~-- 643 (789)
..+.+.+++|.+ .++.|+||.+||+.. ...+||+++.+|+ +|+.|+|. |....
T Consensus 123 ~sf~~~i~lP~g---~~P~Pvii~~~~~~~-------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~~ 185 (433)
T 4g4g_A 123 ISFSASIRKPSG---AGPFPAIIGIGGASI-------------PIPSNVATITFNNDEFGAQMGSGSRGQGK-FYDLFGR 185 (433)
T ss_dssp EEEEEEEECCSS---SCCEEEEEEESCCCS-------------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHCT
T ss_pred EEEEEEEECCCC---CCCccEEEEECCCcc-------------ccCCCeEEEEeCCcccccccCCCcCCccc-cccccCC
Confidence 457899999974 578999999997421 1357999999997 45667776 43211
Q ss_pred CCCCCccc--HHHHHHHHHHHHH----cCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 644 PGKVGSQD--VNDVLTAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 644 ~~~~~~~~--~~D~~~~i~~l~~----~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
...++... .-++..+++||.. ++.||++||+|+|||+||..++++++.. +||+++|+.++..
T Consensus 186 ~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 186 DHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGA 253 (433)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCT
T ss_pred ccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCC
Confidence 12455433 2589999999999 8889999999999999999999999986 5999999998754
No 343
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.04 E-value=7.6e-09 Score=114.21 Aligned_cols=157 Identities=11% Similarity=0.104 Sum_probs=95.1
Q ss_pred ccceeecCCCCEEEEEeecCCCCCCCccCCCCC-C-------CCCCcCCCCCCCcceeeCCc-ccccCCccCceEEEEEc
Q 003886 210 FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTK-G-------GSSDKDCNSWKGQGDWEEDW-GETYAGKRQPSLFVINI 280 (789)
Q Consensus 210 ~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~d~-g~~~~~~~~~~l~v~d~ 280 (789)
+..++|+|||+.|+.. .+... ..|+..... . ......+........|.++. ...+++..+..|.+||+
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i--~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRI--NLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEE--EEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred eEEEEEcCCCCEEEEe-CCCeE--EEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 3789999999998875 43322 233322110 0 01123344445566788885 34455666789999999
Q ss_pred cCCce-----EeccCCCCC-----------CccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEeccc
Q 003886 281 NSGEV-----QAVKGIPKS-----------LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 344 (789)
Q Consensus 281 ~~g~~-----~~l~~~~~~-----------~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 344 (789)
.+++. ..+. .... ..+..++|+|||+. |+..+ . ..|.++|+..
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~----l~~~~---------------~-~~v~iwd~~~ 315 (447)
T 3dw8_B 257 RASALCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHSGRY----MMTRD---------------Y-LSVKVWDLNM 315 (447)
T ss_dssp TTCSSSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTTSSE----EEEEE---------------S-SEEEEEETTC
T ss_pred cCCccccceeeEec-cCCCccccccccccCceEEEEEECCCCCE----EEEee---------------C-CeEEEEeCCC
Confidence 98874 4442 1111 16789999999997 76554 1 3678888721
Q ss_pred ccchhhhhhhhcCCCCCCCeeecCCCCC---------------ccCcceecCCCCEEEEEecCCCCCCCCccccceeEEe
Q 003886 345 YKSEASELELKESSSEDLPVVNLTESIS---------------SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (789)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~Lt~~~~---------------~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~ 409 (789)
.......+..+.. .....+|||||++|+..+.+ ..|++|
T Consensus 316 ---------------~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----------g~v~iw 369 (447)
T 3dw8_B 316 ---------------ENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----------NFFRMF 369 (447)
T ss_dssp ---------------CSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----------TEEEEE
T ss_pred ---------------CccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC-----------CEEEEE
Confidence 1222333333321 12238999999998766543 369999
Q ss_pred ecCCCCC
Q 003886 410 DWPTNGN 416 (789)
Q Consensus 410 d~~~~~~ 416 (789)
|+.+++.
T Consensus 370 d~~~~~~ 376 (447)
T 3dw8_B 370 DRNTKRD 376 (447)
T ss_dssp ETTTCCE
T ss_pred EcCCCcc
Confidence 9987654
No 344
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.03 E-value=1.8e-08 Score=114.39 Aligned_cols=236 Identities=8% Similarity=-0.034 Sum_probs=136.9
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccC
Q 003886 160 VPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 238 (789)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~ 238 (789)
++||+|+.++ ....+ ..+.+++ ..++..+.+...... ..+.+||||++|+....+
T Consensus 144 ~~~p~~~~~v--s~~~d--~~V~v~D~~t~~~~~~i~~g~~~----------~~v~~spdg~~l~v~~~d---------- 199 (543)
T 1nir_A 144 DLDLPNLFSV--TLRDA--GQIALVDGDSKKIVKVIDTGYAV----------HISRMSASGRYLLVIGRD---------- 199 (543)
T ss_dssp CCCGGGEEEE--EEGGG--TEEEEEETTTCCEEEEEECSTTE----------EEEEECTTSCEEEEEETT----------
T ss_pred ccCCCCEEEE--EEcCC--CeEEEEECCCceEEEEEecCccc----------ceEEECCCCCEEEEECCC----------
Confidence 5899885433 33221 2455555 456666555533223 578899999988765332
Q ss_pred CCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEc--cCCceEeccCCCCCCccceEEEee----CCCCCccE
Q 003886 239 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAP----LNEGLHQY 312 (789)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~--~~g~~~~l~~~~~~~~~~~~~wSP----Dg~~~~~~ 312 (789)
..|.+||+ .++++... ++.......++||| ||+.
T Consensus 200 ----------------------------------~~V~v~D~~~~t~~~~~~--i~~g~~p~~va~sp~~~~dg~~---- 239 (543)
T 1nir_A 200 ----------------------------------ARIDMIDLWAKEPTKVAE--IKIGIEARSVESSKFKGYEDRY---- 239 (543)
T ss_dssp ----------------------------------SEEEEEETTSSSCEEEEE--EECCSEEEEEEECCSTTCTTTE----
T ss_pred ----------------------------------CeEEEEECcCCCCcEEEE--EecCCCcceEEeCCCcCCCCCE----
Confidence 56899999 77765433 23344567899999 9996
Q ss_pred EEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCee-ecCCC-----------CCccCcceec
Q 003886 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-----------ISSAFFPRFS 380 (789)
Q Consensus 313 l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~~-----------~~~~~~p~~S 380 (789)
|+ +++.. ...|.++|. .+.++. .+... ........+|
T Consensus 240 l~-v~~~~-------------~~~v~v~D~-----------------~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 240 TI-AGAYW-------------PPQFAIMDG-----------------ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp EE-EEEEE-------------SSEEEEEET-----------------TTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred EE-EEEcc-------------CCeEEEEec-----------------cccccceeecccCcccCccccccCCceEEEEEC
Confidence 54 44321 235778886 444432 22211 1134567899
Q ss_pred CCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEE
Q 003886 381 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 460 (789)
Q Consensus 381 pDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~ 460 (789)
|||+.+++.... ..+|+++|..+.+...++ . +. . .. .+....|+|||++++.
T Consensus 289 ~~~~~~~vs~~~----------~g~i~vvd~~~~~~l~~~----~-i~---~---~~-------~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 289 HEHPEFIVNVKE----------TGKVLLVNYKDIDNLTVT----S-IG---A---AP-------FLHDGGWDSSHRYFMT 340 (543)
T ss_dssp SSSSEEEEEETT----------TTEEEEEECTTSSSCEEE----E-EE---C---CS-------SCCCEEECTTSCEEEE
T ss_pred CCCCEEEEEECC----------CCeEEEEEecCCCcceeE----E-ec---c---Cc-------CccCceECCCCCEEEE
Confidence 999987655432 247999998765432110 1 11 0 11 2346789999998876
Q ss_pred EEEeCCeEEEEEEECCCCcEEEecCCCC---C-ceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 461 SSIWGSSQVIISVNVSSGELLRITPAES---N-FSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 461 ~~~~~~~~~l~~~dl~tg~~~~lt~~~~---~-~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
.....+ .|..+|+.+|++........ . .....++++++.++++.+... ..|.+++..+
T Consensus 341 a~~~~~--~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d--~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSN--KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD--GSISLIGTDP 402 (543)
T ss_dssp EEGGGT--EEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS--SEEEEEECCT
T ss_pred EecCCC--eEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC--ceEEEEEeCC
Confidence 654444 45558999998876543211 0 111234677677666554221 2366666544
No 345
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.03 E-value=3.3e-07 Score=97.65 Aligned_cols=127 Identities=13% Similarity=0.128 Sum_probs=71.4
Q ss_pred cceec-CCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC
Q 003886 376 FPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (789)
Q Consensus 376 ~p~~S-pDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (789)
.+.|. +||+ ++|.+.. .+++++|..++....+ ... .+...... .....| .+...+.+++|
T Consensus 230 ~~~~~~~dG~-~~~vs~~-----------g~V~v~d~~~~~~~v~-~~~-~~~~~~~~-~~g~~p----~g~q~~a~~~~ 290 (386)
T 3sjl_D 230 HPAYSQKAGR-LVWPTYT-----------GKIHQIDLSSGDAKFL-PAV-EALTEAER-ADGWRP----GGWQQVAYHRA 290 (386)
T ss_dssp CCEEETTTTE-EEEEBTT-----------SEEEEEECTTSSCEEC-CCE-ESSCHHHH-HTTEEE----CSSSCEEEETT
T ss_pred cceeEcCCCc-EEEEeCC-----------CEEEEEECCCCcceee-cce-eccccccc-cccccC----CCcceeeECCC
Confidence 46774 7885 6677753 2699999876543211 110 00000000 000001 12234567899
Q ss_pred CCEEEEEEEeC-------CeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 455 GCTMLLSSIWG-------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 455 g~~l~~~~~~~-------~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
++++|+....+ ....++.+|+.++++.+-...........+++|++.++|+.... -..+.++|..+.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~--~~~VsViD~~t~ 364 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTG--DKTLYIHDAESG 364 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETT--TTEEEEEETTTC
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCC--CCeEEEEECCCC
Confidence 99999876532 24689999999998765433322233468899998555554432 234788886654
No 346
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.03 E-value=1.4e-08 Score=107.01 Aligned_cols=233 Identities=10% Similarity=0.057 Sum_probs=131.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecC--CCCEEEEEeecC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEEP 229 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSp--Dg~~la~~~~~~ 229 (789)
..+...+|||||++||..+... ...+|+ .+....+..+. +..+.| ..+.|+| +|+.|+..+.+
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~-----~v~lwd~~~~~~~~~~~l~-gH~~~V------~~v~~~~~~~~~~l~s~s~D- 80 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDR-----SVKIFDVRNGGQILIADLR-GHEGPV------WQVAWAHPMYGNILASCSYD- 80 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTT-----EEEEEEEETTEEEEEEEEE-CCSSCE------EEEEECCGGGSSCEEEEETT-
T ss_pred CeEEEeeEcCCCCEEEEEeCCC-----eEEEEEecCCCcEEEEEEc-CCCccE------EEEEeCCCCCCCEEEEEECC-
Confidence 3578899999999999877553 456662 33222222222 222333 7899987 48888876543
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCce---EeccCCCCCCccceEEEeeC-
Q 003886 230 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPL- 305 (789)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~---~~l~~~~~~~~~~~~~wSPD- 305 (789)
..|.+||+.+++. ..+ ......+..++|+||
T Consensus 81 -------------------------------------------~~v~iWd~~~~~~~~~~~~--~~h~~~V~~v~~~p~~ 115 (316)
T 3bg1_A 81 -------------------------------------------RKVIIWREENGTWEKSHEH--AGHDSSVNSVCWAPHD 115 (316)
T ss_dssp -------------------------------------------SCEEEECCSSSCCCEEEEE--CCCSSCCCEEEECCTT
T ss_pred -------------------------------------------CEEEEEECCCCcceEEEEc--cCCCCceEEEEECCCC
Confidence 4578888887642 223 223346789999998
Q ss_pred -CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC-C---eeecCCCCCccCcceec
Q 003886 306 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-P---VVNLTESISSAFFPRFS 380 (789)
Q Consensus 306 -g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~---~~~Lt~~~~~~~~p~~S 380 (789)
|+. |+..+. +..|.++|+ .++ . ...+..+...+...+|+
T Consensus 116 ~g~~----lasgs~---------------D~~i~lwd~-----------------~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 116 YGLI----LACGSS---------------DGAISLLTY-----------------TGEGQWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp TCSC----EEEECS---------------SSCEEEEEE-----------------CSSSCEEECCBTTSSSSCBCCCEEC
T ss_pred CCcE----EEEEcC---------------CCCEEEEec-----------------CCCCCcceeeeeccccCCcceEEEc
Confidence 665 555542 235677776 222 1 12333445567788999
Q ss_pred CCC-----------------CEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccc
Q 003886 381 PDG-----------------KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 443 (789)
Q Consensus 381 pDG-----------------~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~ 443 (789)
|++ +.|+..+.+ ..|.+||+.+++... .... +.+ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D-----------~~v~lWd~~~~~~~~-------~~~~--------l~~-h~ 212 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCD-----------NLIKLWKEEEDGQWK-------EEQK--------LEA-HS 212 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTT-----------SBCCEEEECTTSCEE-------EEEC--------CBC-CS
T ss_pred cccCCccccccccccCccccceEEEecCC-----------CeEEEEEeCCCCccc-------eeee--------ccc-CC
Confidence 983 455443332 357788875432100 0000 000 01
Q ss_pred cCCCCCccccCC---CEEEEEEEeCCeEEEEEEECCC-Cc--EEEecCCCCCceeEEeeecCCEEEEEEe
Q 003886 444 SSILSNPWLSDG---CTMLLSSIWGSSQVIISVNVSS-GE--LLRITPAESNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 444 ~~~~~~~ws~Dg---~~l~~~~~~~~~~~l~~~dl~t-g~--~~~lt~~~~~~~~~~~s~dg~~l~~~~s 507 (789)
..+..+.|+|++ ..+++++..++...||.++... ++ .+.+......+....|+++++.|+....
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 124567899987 2356777777777777543211 11 1122222233445678888887665543
No 347
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=99.02 E-value=1.9e-10 Score=129.69 Aligned_cols=132 Identities=22% Similarity=0.192 Sum_probs=92.3
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchh-hHHHHHHHHH-CCcEEEEEcCC-CCCCCCchhhccCCCC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSS-VGYSLLIVNYR-GSLGFGEEALQSLPGK 646 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~~~~~~la~-~Gy~V~~~d~r-Gs~G~G~~~~~~~~~~ 646 (789)
+.|.+.+. ++.|... .++.|+||++|||+....... .......|++ .|++|+.+||| |..||..... ....
T Consensus 89 ~edcl~ln--v~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~--~~~~ 162 (529)
T 1p0i_A 89 SEDCLYLN--VWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPG--NPEA 162 (529)
T ss_dssp CSCCCEEE--EEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTT--CTTS
T ss_pred CCcCCeEE--EeeCCCC--CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCC--CCCC
Confidence 34665554 6677642 267899999999886433322 1123456665 79999999999 4334433210 0112
Q ss_pred CCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhC--CCceeEEEEeCCccc
Q 003886 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 707 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~--p~~~~a~v~~~pv~~ 707 (789)
.+...+.|+.++++|+.++. ..|++||+|+|+|.||.++..++... ..+|+++|+.+|...
T Consensus 163 ~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 163 PGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 33445889999999998862 37999999999999999999888753 358999999999653
No 348
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.02 E-value=1.8e-08 Score=111.03 Aligned_cols=185 Identities=15% Similarity=0.081 Sum_probs=108.6
Q ss_pred ceEEEEEccCCce--------EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEeccc
Q 003886 273 PSLFVININSGEV--------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 344 (789)
Q Consensus 273 ~~l~v~d~~~g~~--------~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 344 (789)
..|.+||+.++.. ..+ ......+..++|+|++.. +++++. ....|+++|+..
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----~l~s~~--------------~dg~i~i~d~~~ 263 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIF--TGHTAVVEDVAWHLLHES----LFGSVA--------------DDQKLMIWDTRN 263 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEE--CCCSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEETTC
T ss_pred CeEEEEeCCCCCCCCceeccceee--cCCCCCEeeeEEeCCCCC----EEEEEe--------------CCCeEEEEECCC
Confidence 5688888876321 222 233446788999997776 666552 233688888831
Q ss_pred ccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCccccee
Q 003886 345 YKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 424 (789)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~ 424 (789)
. ........+..+...+...+|+|+|+.++.+...+ ..|.+||+........+..
T Consensus 264 ~-------------~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d----------g~v~vwd~~~~~~~~~~~~-- 318 (430)
T 2xyi_A 264 N-------------NTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD----------KTVALWDLRNLKLKLHSFE-- 318 (430)
T ss_dssp S-------------CSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SEEEEEETTCTTSCSEEEE--
T ss_pred C-------------CCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC----------CeEEEEeCCCCCCCeEEee--
Confidence 0 00123445555666788999999999755554332 3599999876332110000
Q ss_pred eEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCC------------CcEEEecCCCC-Cce
Q 003886 425 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS------------GELLRITPAES-NFS 491 (789)
Q Consensus 425 ~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~t------------g~~~~lt~~~~-~~~ 491 (789)
. ....+..+.|+|+++.+++++..++...||.+...+ .++......+. .+.
T Consensus 319 -------~---------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 382 (430)
T 2xyi_A 319 -------S---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 382 (430)
T ss_dssp -------C---------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEE
T ss_pred -------c---------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCce
Confidence 0 011345678999998888888777776676544311 13333333332 355
Q ss_pred eEEeeecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 492 WSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 492 ~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
...|++++.+++++.+... .|.+.++.
T Consensus 383 ~~~~~p~~~~~l~s~s~dg---~i~iw~~~ 409 (430)
T 2xyi_A 383 DFSWNPNEPWIICSVSEDN---IMQVWQMA 409 (430)
T ss_dssp EEEECSSSTTEEEEEETTS---EEEEEEEC
T ss_pred EEEECCCCCCEEEEEECCC---CEEEeEcc
Confidence 5678888886666665443 25555543
No 349
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=99.01 E-value=1.7e-10 Score=126.59 Aligned_cols=112 Identities=12% Similarity=0.053 Sum_probs=80.8
Q ss_pred CCCcEEEEEcCCCCCCCchhhHH-HHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (789)
...|+||++||.+.+. ...|.. ....|++ .||.|+++|+||. |.+........ ...-.+|+.+.++++.++..
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~---g~s~~~~~~~~-~~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGG---SKAQYSQASQN-IRVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHH---HTSCHHHHHHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccc---cCccchhhHhh-HHHHHHHHHHHHHHHHHhcC
Confidence 4578999999977653 235655 5566776 8999999999973 32211100000 01124678888888876534
Q ss_pred CCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++.+++.|+|||+||.+++.++.++|++++++++.+|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 678999999999999999999999999999999988764
No 350
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.00 E-value=8.9e-08 Score=101.25 Aligned_cols=259 Identities=15% Similarity=0.113 Sum_probs=145.6
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEec-CCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~-~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
....|+|+|||+ |+++...+ .+++.++ .+++...+... ...+ .++.|+|||+.++......
T Consensus 46 ~~~~~~~~~~g~-l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~----------~~i~~~~dg~l~v~~~~~~--- 108 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDVFE---GNIFKINPETKEIKRPFVSHKANP----------AAIKIHKDGRLFVCYLGDF--- 108 (333)
T ss_dssp CEEEEEECTTSC-EEEEETTT---CEEEEECTTTCCEEEEEECSSSSE----------EEEEECTTSCEEEEECTTS---
T ss_pred cccCcEECCCCC-EEEEECCC---CEEEEEeCCCCcEEEEeeCCCCCc----------ceEEECCCCcEEEEeCCCC---
Confidence 356899999998 55543322 2577766 45555554422 2222 6899999997544321110
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCCCCcc
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~~~~~ 311 (789)
.....|+++|.++++.+.+ ........+..+.++|||+
T Consensus 109 -------------------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~---- 147 (333)
T 2dg1_A 109 -------------------------------------KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG---- 147 (333)
T ss_dssp -------------------------------------SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC----
T ss_pred -------------------------------------CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC----
Confidence 0125799999998887643 1111223566889999996
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEec
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~ 391 (789)
|+++...... ......||+++. ++++.+.+.........++|+|||+.|++...
T Consensus 148 -l~v~~~~~~~--------~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 148 -FYFTDFRGYS--------TNPLGGVYYVSP-----------------DFRTVTPIIQNISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp -EEEEECCCBT--------TBCCEEEEEECT-----------------TSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred -EEEEeccccc--------cCCCceEEEEeC-----------------CCCEEEEeecCCCcccceEECCCCCEEEEEeC
Confidence 5665432100 012347999987 55566655443334567899999998877653
Q ss_pred CCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003886 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (789)
Q Consensus 392 ~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (789)
. ...|+++|+.+.+........ .+. .... ... .+..+.+++||+ |++.....+ .|+
T Consensus 202 ~----------~~~i~~~d~~~~g~~~~~~~~-~~~--~~~~-~~~-------~~~~i~~d~~G~-l~v~~~~~~--~v~ 257 (333)
T 2dg1_A 202 T----------ANRLHRIALEDDGVTIQPFGA-TIP--YYFT-GHE-------GPDSCCIDSDDN-LYVAMYGQG--RVL 257 (333)
T ss_dssp G----------GTEEEEEEECTTSSSEEEEEE-EEE--EECC-SSS-------EEEEEEEBTTCC-EEEEEETTT--EEE
T ss_pred C----------CCeEEEEEecCCCcCcccccc-eEE--EecC-CCC-------CCCceEECCCCC-EEEEEcCCC--EEE
Confidence 3 236999998643221000000 000 0000 000 123467888987 655543333 577
Q ss_pred EEECCCCcEEEecCCCC------CceeEEeeecCCEEEEEEeCCC--CCCeEEEEeec
Q 003886 472 SVNVSSGELLRITPAES------NFSWSLLTLDGDNIIAVSSSPV--DVPQVKYGYFV 521 (789)
Q Consensus 472 ~~dl~tg~~~~lt~~~~------~~~~~~~s~dg~~l~~~~ss~~--~p~~i~~~~~~ 521 (789)
++|.++..+..+..... ......+++|++.|+++..... ....||.+++.
T Consensus 258 ~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 258 VFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred EECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 78885444555543221 2344577888888877766532 23467777654
No 351
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.00 E-value=6.5e-09 Score=113.11 Aligned_cols=120 Identities=14% Similarity=0.114 Sum_probs=88.2
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHH------CCcEEEEEcCCCCCCCCchhhccCCC
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQSLPG 645 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~------~Gy~V~~~d~rGs~G~G~~~~~~~~~ 645 (789)
+|..++.....+. ....|.||++||.+++ ...|...+..|++ .||.|+++|++| +|.+....
T Consensus 93 ~g~~i~~~~~~~~----~~~~~pllllHG~~~s--~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG---~G~S~~~~--- 160 (408)
T 3g02_A 93 EGLTIHFAALFSE----REDAVPIALLHGWPGS--FVEFYPILQLFREEYTPETLPFHLVVPSLPG---YTFSSGPP--- 160 (408)
T ss_dssp TTEEEEEEEECCS----CTTCEEEEEECCSSCC--GGGGHHHHHHHHHHCCTTTCCEEEEEECCTT---STTSCCSC---
T ss_pred CCEEEEEEEecCC----CCCCCeEEEECCCCCc--HHHHHHHHHHHhcccccccCceEEEEECCCC---CCCCCCCC---
Confidence 7888988777653 2345779999998875 5567778888887 699999999998 55544221
Q ss_pred CCCcccHHHHHHHHHHHHHcCCCCCc-cEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 646 KVGSQDVNDVLTAIDHVIDMGLANPS-KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~~~d~~-rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
......++++.+.+..++++ +..+ ++.++|||+||++++.++.++|+++..++...++
T Consensus 161 ~~~~~~~~~~a~~~~~l~~~--lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 161 LDKDFGLMDNARVVDQLMKD--LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp SSSCCCHHHHHHHHHHHHHH--TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHH--hCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 01234577777777777776 3455 8999999999999999999998766665554443
No 352
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.00 E-value=9.4e-08 Score=104.89 Aligned_cols=244 Identities=15% Similarity=0.093 Sum_probs=151.8
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
.....||+++ .||...+. -..+| .+|+..+++.+.. ..+.| .+++|||||+.||..+.+
T Consensus 108 ~~~l~wS~~n-~lAvgld~------tV~lWd~~tg~~~~~~~~~~-~~~~V------~sv~fspdg~~lasgs~D----- 168 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQMEQ-PGEYI------SSVAWIKEGNYLAVGTSS----- 168 (420)
T ss_dssp CBCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECCS-TTCCE------EEEEECTTSSEEEEEETT-----
T ss_pred ceeEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEecC-CCCcE------EEEEECCCCCEEEEEECC-----
Confidence 4568999864 77765432 35677 4666666666432 11223 799999999999876443
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (789)
..|.+||+.+++..... ......+. ++++|++. |
T Consensus 169 ---------------------------------------g~v~iWd~~~~~~~~~~-~~h~~~v~--~~s~~~~~----l 202 (420)
T 4gga_A 169 ---------------------------------------AEVQLWDVQQQKRLRNM-TSHSARVG--SLSWNSYI----L 202 (420)
T ss_dssp ---------------------------------------SCEEEEETTTTEEEEEE-CCCSSCEE--EEEEETTE----E
T ss_pred ---------------------------------------CeEEEEEcCCCcEEEEE-eCCCCceE--EEeeCCCE----E
Confidence 56889999988765441 12222333 45566664 4
Q ss_pred EEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCC
Q 003886 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (789)
Q Consensus 314 ~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~ 393 (789)
+..+ ....++.+|... .......+..+........|+|+|+.|+..+.+.
T Consensus 203 ~sgs---------------~d~~i~~~d~~~---------------~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~ 252 (420)
T 4gga_A 203 SSGS---------------RSGHIHHHDVRV---------------AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 252 (420)
T ss_dssp EEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEe---------------CCCceeEeeecc---------------cceeeEEecccccceeeeeecCCCCeeeeeeccc
Confidence 4443 233577777621 2233455666777788899999999998777553
Q ss_pred CCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003886 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (789)
Q Consensus 394 ~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~ 473 (789)
.+.+||..++........... . ....+....|+|++..+++++.......|..+
T Consensus 253 -----------~v~i~~~~~~~~~~~~~~~~~-----------~----~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 253 -----------LVNVWPSAPGEGGWVPLQTFT-----------Q----HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp -----------CEEEEESSCCSSCSCCSEEEC-----------C----CSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred -----------cceEEeeccccccceeeeeec-----------c----cCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 488888877554211110000 0 01123456799988878777654444566777
Q ss_pred ECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 474 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 474 dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
|+.+|+...............++++++.++....... ..|.+.+..+
T Consensus 307 d~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d--~~I~iwd~~~ 353 (420)
T 4gga_A 307 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ--NQLVIWKYPT 353 (420)
T ss_dssp ETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTT--CCEEEEETTT
T ss_pred eCCccccceeeccccceeeeeecCCCCeEEEEEecCC--CEEEEEECCC
Confidence 9989987776655555555678899998877654332 2366666543
No 353
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.00 E-value=1.1e-07 Score=100.32 Aligned_cols=211 Identities=13% Similarity=0.074 Sum_probs=118.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cC-CceeEEEecCCCccccccCCCcccceeecC--CCCEEEEEeec
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQ-SQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEE 228 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~-~~~~~~~~~~~~~~g~v~~d~~~~~~~wSp--Dg~~la~~~~~ 228 (789)
..+...+|||||++||.....+ .+.+| .. ....+....-....+.| ..+.|+| |++.|+..+.+
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~v------~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQ-----HIKVFKLDKDTSNWELSDSWRAHDSSI------VAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEEECSSSCCEEEEEEEECCSSCE------EEEEECCGGGCSEEEEEETT
T ss_pred cceeEEEEcCCCCEEEEeeCCC-----eEEEEECCCCCCcceecceeccCCCcE------EEEEEcCCCCCCEEEEEcCC
Confidence 4588999999999998876543 45555 22 22212222111222233 7899999 69988876443
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCc----------eEeccCCCCCCccc
Q 003886 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----------VQAVKGIPKSLSVG 298 (789)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~----------~~~l~~~~~~~~~~ 298 (789)
..|.+||+.+++ ...+ ......+.
T Consensus 81 --------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~~~v~ 114 (351)
T 3f3f_A 81 --------------------------------------------KTVKLWEEDPDQEECSGRRWNKLCTL--NDSKGSLY 114 (351)
T ss_dssp --------------------------------------------SCEEEEEECTTSCTTSSCSEEEEEEE--CCCSSCEE
T ss_pred --------------------------------------------CeEEEEecCCCcccccccCcceeeee--cccCCcee
Confidence 468888887763 2233 23345678
Q ss_pred eEEEeeC--CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec----CCCCC
Q 003886 299 QVVWAPL--NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL----TESIS 372 (789)
Q Consensus 299 ~~~wSPD--g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L----t~~~~ 372 (789)
.+.|+|+ ++. |+..+ .+..|+++|+.......... .......+ ..+..
T Consensus 115 ~~~~~~~~~~~~----l~~~~---------------~dg~v~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 168 (351)
T 3f3f_A 115 SVKFAPAHLGLK----LACLG---------------NDGILRLYDALEPSDLRSWT-------LTSEMKVLSIPPANHLQ 168 (351)
T ss_dssp EEEECCGGGCSE----EEEEE---------------TTCEEEEEECSSTTCTTCCE-------EEEEEESCSCCCSSCSC
T ss_pred EEEEcCCCCCcE----EEEec---------------CCCcEEEecCCChHHhcccc-------ccccccccccccCCccc
Confidence 8999999 886 66655 22367788873110000000 00000001 12344
Q ss_pred ccCcceecCC---CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCC
Q 003886 373 SAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 449 (789)
Q Consensus 373 ~~~~p~~SpD---G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~ 449 (789)
......|+|+ ++.|+..+.+. .+..++...+.... +.. ... ....+..+
T Consensus 169 ~~~~~~~~p~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~-------~~~-~~~---------h~~~i~~~ 220 (351)
T 3f3f_A 169 SDFCLSWCPSRFSPEKLAVSALEQ-----------AIIYQRGKDGKLHV-------AAK-LPG---------HKSLIRSI 220 (351)
T ss_dssp CCEEEEECCCSSSCCEEEEEETTE-----------EEEEEECTTSCEEE-------EEE-CCC---------CCSCEEEE
T ss_pred ceeEEEeccCCCCCcEEEEecCCC-----------cEEEEccCCCceee-------eee-cCC---------CCcceeEE
Confidence 5778899998 88887766443 24444433322110 000 000 01134567
Q ss_pred ccccCCC---EEEEEEEeCCeEEEEEEEC
Q 003886 450 PWLSDGC---TMLLSSIWGSSQVIISVNV 475 (789)
Q Consensus 450 ~ws~Dg~---~l~~~~~~~~~~~l~~~dl 475 (789)
.|+|++. .+++++..++...+|.+..
T Consensus 221 ~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 221 SWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred EECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 8999983 5667777788888887663
No 354
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.00 E-value=3.7e-08 Score=103.03 Aligned_cols=249 Identities=10% Similarity=0.035 Sum_probs=141.4
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
...|+|+|||+.|+|+...+ ..++.+..+++........... .++.|+|||+.++. ..
T Consensus 47 ~egp~~~~~g~~l~~~d~~~---~~i~~~~~~g~~~~~~~~~~~~----------~gl~~d~dG~l~v~--~~------- 104 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVG---RRVLGWREDGTVDVLLDATAFT----------NGNAVDAQQRLVHC--EH------- 104 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTT---TEEEEEETTSCEEEEEESCSCE----------EEEEECTTSCEEEE--ET-------
T ss_pred ccCCeEeCCCCEEEEEECCC---CEEEEEeCCCCEEEEeCCCCcc----------ceeeECCCCCEEEE--EC-------
Confidence 45799999999998886543 2466666555544333322222 68899999984433 21
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCC---CCccceEEEeeCCCCCccE
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQY 312 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSPDg~~~~~~ 312 (789)
....|++++.+ |+.+.+..... ...+..++++|||+
T Consensus 105 -----------------------------------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~----- 143 (305)
T 3dr2_A 105 -----------------------------------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA----- 143 (305)
T ss_dssp -----------------------------------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-----
T ss_pred -----------------------------------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-----
Confidence 12457777775 55554421111 12356789999997
Q ss_pred EEEEe----ecCCceeeeeee-eccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEE
Q 003886 313 LVFVG----WSSETRKLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 387 (789)
Q Consensus 313 l~f~~----~~~~~~~~g~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la 387 (789)
|+|+- .... ..+... .......||++|. ++++.+.+. .......++|||||+.|+
T Consensus 144 l~~td~~~g~~~~--~~~~~~~~~~~~~~v~~~d~-----------------~~g~~~~~~-~~~~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 144 IWFTDPPFGLRKP--SQGCPADPELAHHSVYRLPP-----------------DGSPLQRMA-DLDHPNGLAFSPDEQTLY 203 (305)
T ss_dssp EEEECCSGGGSCG--GGSCCCCCSSSCEEEEEECS-----------------SSCCCEEEE-EESSEEEEEECTTSSEEE
T ss_pred EEEeCcCCCcccc--ccccccccccCCCeEEEEcC-----------------CCCcEEEEe-cCCCCcceEEcCCCCEEE
Confidence 67641 1100 000000 0011247999997 667776665 434456789999999887
Q ss_pred EEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCe
Q 003886 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 467 (789)
Q Consensus 388 ~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~ 467 (789)
+...... ......|+++|+.+++ ++. ...+.. . ... ....+.+.+||+ |++.. .
T Consensus 204 v~~~~~~-----~~~~~~i~~~~~~~~~---l~~-~~~~~~---~--~~~-------~pdgi~~d~~G~-lwv~~-~--- 257 (305)
T 3dr2_A 204 VSQTPEQ-----GHGSVEITAFAWRDGA---LHD-RRHFAS---V--PDG-------LPDGFCVDRGGW-LWSSS-G--- 257 (305)
T ss_dssp EEECCC--------CCCEEEEEEEETTE---EEE-EEEEEC---C--SSS-------CCCSEEECTTSC-EEECC-S---
T ss_pred EEecCCc-----CCCCCEEEEEEecCCC---ccC-CeEEEE---C--CCC-------CCCeEEECCCCC-EEEec-C---
Confidence 7654320 0112479999987643 111 111111 0 001 234567889998 66553 2
Q ss_pred EEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEe
Q 003886 468 QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 519 (789)
Q Consensus 468 ~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~ 519 (789)
..|++++.++..+..+..... .....|+++++.|+++.++ .+|+++
T Consensus 258 ~gv~~~~~~g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~~-----~l~~~~ 303 (305)
T 3dr2_A 258 TGVCVFDSDGQLLGHIPTPGT-ASNCTFDQAQQRLFITGGP-----CLWMLP 303 (305)
T ss_dssp SEEEEECTTSCEEEEEECSSC-CCEEEECTTSCEEEEEETT-----EEEEEE
T ss_pred CcEEEECCCCCEEEEEECCCc-eeEEEEeCCCCEEEEEcCC-----eEEEEE
Confidence 248889986555555544332 3445777788877766643 466655
No 355
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.99 E-value=9.7e-08 Score=99.43 Aligned_cols=243 Identities=12% Similarity=0.065 Sum_probs=140.2
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
...|.|+|+++.|+++.... ..++.++..+...+....+..+ ..+.|+|||+ |+.. .
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~---~~i~~~d~~~~~~~~~~~~~~~----------~~i~~~~dG~-l~v~-~-------- 71 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPA---KKVCRWDSFTKQVQRVTMDAPV----------SSVALRQSGG-YVAT-I-------- 71 (297)
T ss_dssp EEEEEEETTTTEEEEEETTT---TEEEEEETTTCCEEEEECSSCE----------EEEEEBTTSS-EEEE-E--------
T ss_pred ccCCeEECCCCEEEEEECCC---CEEEEEECCCCcEEEEeCCCce----------EEEEECCCCC-EEEE-E--------
Confidence 34799999999998876432 3577777333333444444333 6899999999 3332 2
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCC---CCccceEEEeeCCCCCccE
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQY 312 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSPDg~~~~~~ 312 (789)
...|+++|+++++.+.+..... ......++++|||+
T Consensus 72 ------------------------------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~----- 110 (297)
T 3g4e_A 72 ------------------------------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR----- 110 (297)
T ss_dssp ------------------------------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-----
T ss_pred ------------------------------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-----
Confidence 1468899999888776531111 12456789999997
Q ss_pred EEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecC
Q 003886 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (789)
Q Consensus 313 l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~ 392 (789)
|++.......... ........||+++. + +....+.........++|||||+.|++....
T Consensus 111 l~~~~~~~~~~~~---~~~~~~~~l~~~d~-----------------~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 111 YFAGTMAEETAPA---VLERHQGALYSLFP-----------------D-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEEEEEECCSBTT---BCCTTCEEEEEECT-----------------T-SCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred EEEecCCcccccc---cccCCCcEEEEEEC-----------------C-CCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 5665532211000 00012346899885 3 3444443333345678999999998776643
Q ss_pred CCCCCCCccccceeEEeecC--CCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEE
Q 003886 393 SSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (789)
Q Consensus 393 ~~~~~g~~~~~~~L~~~d~~--~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (789)
. .+|+++|++ ++.. . ....+..+ ..... ....+.+.+||+ |++.....+ .|
T Consensus 170 ~----------~~i~~~~~d~~~G~~---~-~~~~~~~~---~~~~~-------~p~g~~~d~~G~-lwva~~~~~--~v 222 (297)
T 3g4e_A 170 S----------YSVDAFDYDLQTGQI---S-NRRSVYKL---EKEEQ-------IPDGMCIDAEGK-LWVACYNGG--RV 222 (297)
T ss_dssp G----------TEEEEEEECTTTCCE---E-EEEEEEEC---CGGGC-------EEEEEEEBTTSC-EEEEEETTT--EE
T ss_pred C----------CcEEEEeccCCCCcc---c-CcEEEEEC---CCCCC-------CCCeeEECCCCC-EEEEEcCCC--EE
Confidence 2 468999874 3321 1 00011110 00001 123557888985 766544333 48
Q ss_pred EEEECCCCcEEEecCCC-CCceeEEee-ecCCEEEEEEeCCC
Q 003886 471 ISVNVSSGELLRITPAE-SNFSWSLLT-LDGDNIIAVSSSPV 510 (789)
Q Consensus 471 ~~~dl~tg~~~~lt~~~-~~~~~~~~s-~dg~~l~~~~ss~~ 510 (789)
+++|.++|++....... .......|. ++++.|+.+.....
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred EEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 88999888865443333 234445677 77888877776543
No 356
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=98.99 E-value=8.5e-10 Score=111.29 Aligned_cols=92 Identities=18% Similarity=0.186 Sum_probs=64.0
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCC-
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA- 668 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~- 668 (789)
.+.|.||++||.+++ ...|......|+ .+|.|+++|+|| +|.+... ..+|+.+.++.+++.-.+
T Consensus 11 ~~~~~lv~lhg~g~~--~~~~~~~~~~L~-~~~~vi~~Dl~G---hG~S~~~---------~~~~~~~~~~~~~~~l~~~ 75 (242)
T 2k2q_B 11 SEKTQLICFPFAGGY--SASFRPLHAFLQ-GECEMLAAEPPG---HGTNQTS---------AIEDLEELTDLYKQELNLR 75 (242)
T ss_dssp TCCCEEESSCCCCHH--HHHHHHHHHHHC-CSCCCEEEECCS---SCCSCCC---------TTTHHHHHHHHTTTTCCCC
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHhCC-CCeEEEEEeCCC---CCCCCCC---------CcCCHHHHHHHHHHHHHhh
Confidence 445678999996653 456776777775 469999999998 5554211 134666666665543112
Q ss_pred CCccEEEEEcCccHHHHHHHHHh------CCCce
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIGQ------APDKF 696 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~~------~p~~~ 696 (789)
..+++.|+||||||.+++.+|.+ +|+++
T Consensus 76 ~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v 109 (242)
T 2k2q_B 76 PDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAV 109 (242)
T ss_dssp CCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSE
T ss_pred cCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEE
Confidence 23689999999999999999876 56654
No 357
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.99 E-value=2.4e-10 Score=128.92 Aligned_cols=132 Identities=22% Similarity=0.191 Sum_probs=92.6
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchh-hHHHHHHHH-HCCcEEEEEcCC-CCCCCCchhhccCCCC
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLS-SVGYSLLIVNYR-GSLGFGEEALQSLPGK 646 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~~~~~~la-~~Gy~V~~~d~r-Gs~G~G~~~~~~~~~~ 646 (789)
+.|+..+. ++.|... .++.|+||++|||+....... .......|+ +.|++|+.+||| |..||..... ....
T Consensus 91 sedcl~ln--v~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~--~~~~ 164 (537)
T 1ea5_A 91 SEDCLYLN--IWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHG--SQEA 164 (537)
T ss_dssp CSCCCEEE--EEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTT--CSSS
T ss_pred CCcCCeEE--EeccCCC--CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCC--CCCC
Confidence 44665554 5677642 367899999999887543332 112345666 789999999999 3334433210 0112
Q ss_pred CCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHh--CCCceeEEEEeCCccc
Q 003886 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLCN 707 (789)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~--~p~~~~a~v~~~pv~~ 707 (789)
.+...+.|+.++++|+.++. ..|++||.|+|+|.||.++..++.. ...+|+++|+.+|...
T Consensus 165 ~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 165 PGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 33445899999999998863 3699999999999999999988774 2358999999998653
No 358
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.99 E-value=2.2e-10 Score=129.73 Aligned_cols=131 Identities=21% Similarity=0.228 Sum_probs=89.4
Q ss_pred cCCCeeEEEEEEecCCCC-CCCCCcEEEEEcCCCCCCCchh-------hHHHHHHHHH-CCcEEEEEcCC-CCCCCCchh
Q 003886 570 KGAQKPFEAIFVSSSHKK-DCSCDPLIVVLHGGPHSVSLSS-------YSKSLAFLSS-VGYSLLIVNYR-GSLGFGEEA 639 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~-~~~~~P~vv~~HGg~~~~~~~~-------~~~~~~~la~-~Gy~V~~~d~r-Gs~G~G~~~ 639 (789)
+.|+..+. ++.|.... ..++.|+||++|||++...... +......|+. .|++|+.+||| |..|+....
T Consensus 77 sedcl~ln--v~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~ 154 (579)
T 2bce_A 77 NEDCLYLN--IWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTG 154 (579)
T ss_dssp CSCCCEEE--EEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCS
T ss_pred CCCCCEEE--EEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCC
Confidence 45665555 66776432 3467899999999876432221 1112345554 57999999999 433443322
Q ss_pred hccCCCCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHh--CCCceeEEEEeCCc
Q 003886 640 LQSLPGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 705 (789)
Q Consensus 640 ~~~~~~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~--~p~~~~a~v~~~pv 705 (789)
....+++ ..+.|+.++++|+.++. ..|++||+|+|+|.||.++..++.. ...+|+++|+.++.
T Consensus 155 ~~~~pgn---~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 155 DSNLPGN---YGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp STTCCCC---HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCCCCc---cchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 1122333 34789999999998862 3699999999999999999988764 34689999999875
No 359
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.99 E-value=7.2e-10 Score=125.05 Aligned_cols=132 Identities=18% Similarity=0.197 Sum_probs=90.7
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchh-hH--HHH-HHHH-HCCcEEEEEcCCCCC-CCCc--hhhc
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSL-AFLS-SVGYSLLIVNYRGSL-GFGE--EALQ 641 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~--~~~-~~la-~~Gy~V~~~d~rGs~-G~G~--~~~~ 641 (789)
+.|+..+. ++.|.+....++.|+||++|||+....... +. ... +.++ ..|++|+.+|||.++ |+.. +...
T Consensus 102 sedcl~l~--v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 179 (544)
T 1thg_A 102 NEDCLYLN--VFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITA 179 (544)
T ss_dssp CSCCCEEE--EEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeEEE--EEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccc
Confidence 44665554 678875445678999999999987654332 21 112 2233 358999999999643 2221 1111
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhC--------CCceeEEEEeCCcc
Q 003886 642 SLPGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPLC 706 (789)
Q Consensus 642 ~~~~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~--------p~~~~a~v~~~pv~ 706 (789)
. ..+...+.|+.++++|+.++. ..|++||+|+|+|.||++++.++... ..+|+++|+.+|..
T Consensus 180 ~---~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 180 E---GNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp H---TCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred c---CCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 1 123345899999999998862 37999999999999999998877642 45899999999853
No 360
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=98.99 E-value=3.1e-09 Score=111.90 Aligned_cols=105 Identities=23% Similarity=0.436 Sum_probs=72.6
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCCC-cccHHHHHHHHHHHHHcCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVG-SQDVNDVLTAIDHVIDMGLA 668 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~~~ 668 (789)
..|.||++||++.+ ...|......|++ .+|.|+++|+|| +|.+.... ...+. ....+|+.+.++.+... +
T Consensus 37 ~~p~lvllHG~~~~--~~~w~~~~~~L~~~~~~~via~Dl~G---hG~S~~~~-~~~~~~~~~a~dl~~~l~~l~~~--~ 108 (316)
T 3c5v_A 37 EGPVLLLLHGGGHS--ALSWAVFTAAIISRVQCRIVALDLRS---HGETKVKN-PEDLSAETMAKDVGNVVEAMYGD--L 108 (316)
T ss_dssp SSCEEEEECCTTCC--GGGGHHHHHHHHTTBCCEEEEECCTT---STTCBCSC-TTCCCHHHHHHHHHHHHHHHHTT--C
T ss_pred CCcEEEEECCCCcc--cccHHHHHHHHhhcCCeEEEEecCCC---CCCCCCCC-ccccCHHHHHHHHHHHHHHHhcc--C
Confidence 34789999997653 5677777778876 389999999998 56553211 11111 11244555555554321 1
Q ss_pred CCccEEEEEcCccHHHHHHHHHh--CCCceeEEEEeCCc
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 705 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~~--~p~~~~a~v~~~pv 705 (789)
.+++.|+||||||++++.+|.+ +|+ ++++|+.++.
T Consensus 109 -~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 109 -PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp -CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred -CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 2689999999999999999985 576 9999998764
No 361
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.99 E-value=5.6e-08 Score=104.11 Aligned_cols=246 Identities=9% Similarity=0.031 Sum_probs=121.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEec-CCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
..+...+|||||+.||...+.. +.+|+.......... ..+. ..+.|+++++.++.++..+. .
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~------~~iw~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~d~-~ 82 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS------FEIYNVHPVAHIMSQEMRHL----------SKVRMLHRTNYVAFVTGVKE-V 82 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE------EEEEEETTEEEEEEEECSCC----------CEEEECTTSSEEEEECSSTT-E
T ss_pred CceEEEEECCCCCEEEEEcCCE------EEEEecCCcceeeeeecCCe----------EEEEEcCCCCEEEEEECCcc-E
Confidence 4588999999999998764432 356632222222211 1122 67889999998887654321 1
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCC-ceEeccCCCCCCccceEEEeeCCCCCcc
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g-~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (789)
...|+...+...... ..........+.++. ........|++||+.++ +.... ... ..+..+++| +.
T Consensus 83 v~iWd~~~~~~~~~~-~~~~~v~~v~~~~~~---~~~~~~~~i~i~d~~~~~~~~~~--~~~--~~~~~~~s~--~~--- 149 (355)
T 3vu4_A 83 VHIWDDVKKQDVSRI-KVDAPVKDLFLSREF---IVVSYGDVISVFKFGNPWKRITD--DIR--FGGVCEFSN--GL--- 149 (355)
T ss_dssp EEEEETTTTEEEEEE-ECSSCEEEEEECSSE---EEEEETTEEEEEESSTTCCBSSC--CEE--EEEEEEEET--TE---
T ss_pred EEEEECCCCcEEEEE-ECCCceEEEEEcCCE---EEEEEcCEEEEEECCCCceeeEE--ecc--CCceEEEEc--cE---
Confidence 122332111111000 011111112222221 11112456777777665 32211 111 333445666 34
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCCCCccCcceecCCCCEEEEEe
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~la~~s 390 (789)
+++.+. .....|.++|+............. ....-.. ...+..+...+...+|||||++|+..+
T Consensus 150 -la~~sg-------------~~~g~v~iwd~~~~~~~~~~~~~~-~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 150 -LVYSNE-------------FNLGQIHITKLQSSGSATTQDQGV-QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp -EEEEES-------------SCTTCEEEEECCC-------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred -EEEeCC-------------CcCcEEEEEECCCCCccccccccc-cccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 565521 123367788872110000000000 0000001 566777788899999999999998777
Q ss_pred cCCCCCCCCccccce-eEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEE
Q 003886 391 AKSSVDSGAHSATDS-LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~-L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (789)
.+. . +.+||+.+++..... .. |.....+..+.|+|||+.| +++..++...
T Consensus 215 ~d~-----------~~v~iwd~~~~~~~~~~----------~~-------g~h~~~v~~~~~s~~~~~l-~s~s~d~~v~ 265 (355)
T 3vu4_A 215 QDG-----------TIIRVFKTEDGVLVREF----------RR-------GLDRADVVDMKWSTDGSKL-AVVSDKWTLH 265 (355)
T ss_dssp TTC-----------SEEEEEETTTCCEEEEE----------EC-------TTCCSCEEEEEECTTSCEE-EEEETTCEEE
T ss_pred CCC-----------CEEEEEECCCCcEEEEE----------Ec-------CCCCCcEEEEEECCCCCEE-EEEECCCEEE
Confidence 543 5 889998875542110 00 0001134567899999865 5556666666
Q ss_pred EEEE
Q 003886 470 IISV 473 (789)
Q Consensus 470 l~~~ 473 (789)
||.+
T Consensus 266 iw~~ 269 (355)
T 3vu4_A 266 VFEI 269 (355)
T ss_dssp EEES
T ss_pred EEEc
Confidence 6644
No 362
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.98 E-value=1.5e-08 Score=111.69 Aligned_cols=148 Identities=14% Similarity=0.146 Sum_probs=91.5
Q ss_pred ceEEEEEccCCc----eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccch
Q 003886 273 PSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 348 (789)
Q Consensus 273 ~~l~v~d~~~g~----~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 348 (789)
..|.+||+.++. ...+ ......+..++|+|+++. +++++.. ...|.++|+..
T Consensus 254 g~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~----~l~tg~~--------------dg~v~vwd~~~---- 309 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEF----ILATGSA--------------DKTVALWDLRN---- 309 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTT----EEEEEET--------------TSEEEEEETTC----
T ss_pred CeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCC----EEEEEeC--------------CCeEEEEeCCC----
Confidence 678999998762 2233 233446788999999998 7777632 23688888731
Q ss_pred hhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccc----ee
Q 003886 349 ASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK----IV 424 (789)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~----~~ 424 (789)
.......+..+...+...+|+|+|+.++.....+ ..|.+||+...+....... ..
T Consensus 310 -----------~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~ 368 (430)
T 2xyi_A 310 -----------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTD----------RRLHVWDLSKIGEEQSTEDAEDGPP 368 (430)
T ss_dssp -----------TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SCCEEEEGGGTTCCCCHHHHHHCCT
T ss_pred -----------CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC----------CcEEEEeCCCCccccCccccccCCc
Confidence 1234556666777889999999998755554332 3588899876332111000 00
Q ss_pred eEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003886 425 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (789)
Q Consensus 425 ~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~d 474 (789)
.+...... ....+..+.|+|+++.+++++..++...+|.++
T Consensus 369 ~~~~~~~~---------h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 369 ELLFIHGG---------HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TEEEECCC---------CSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ceEEEcCC---------CCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 01111000 112345778999999677777778888888765
No 363
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=98.97 E-value=3.8e-09 Score=111.39 Aligned_cols=105 Identities=12% Similarity=0.138 Sum_probs=72.0
Q ss_pred CCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHH-HHHHHcCC
Q 003886 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI-DHVIDMGL 667 (789)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~ 667 (789)
....|.||++||.........|......| ..||.|+++|++| +|.+... ...++++.+.+ +.+.+.
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G---~G~~~~~-------~~~~~~~~~~~~~~l~~~-- 144 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPG---FHGGQAL-------PATLTVLVRSLADVVQAE-- 144 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTT---SSTTCCE-------ESSHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCC---CCCCCCC-------CCCHHHHHHHHHHHHHHh--
Confidence 34568899999942222456777777778 7889999999998 4432211 11343433332 222222
Q ss_pred CCCccEEEEEcCccHHHHHHHHHhC---CCceeEEEEeCCcc
Q 003886 668 ANPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLC 706 (789)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~~~~~---p~~~~a~v~~~pv~ 706 (789)
.+..++.|+|||+||.++..++.++ +++++++|+.++..
T Consensus 145 ~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~ 186 (319)
T 3lcr_A 145 VADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYS 186 (319)
T ss_dssp HTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCC
T ss_pred cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCC
Confidence 2346899999999999999998887 88899999987653
No 364
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.97 E-value=7.5e-08 Score=102.71 Aligned_cols=100 Identities=16% Similarity=0.283 Sum_probs=68.2
Q ss_pred cccEEEEeCCC---CCeEEEEecCCCCCCeEEEEec--C-Ccee-EEEecCCCccccccCCCcccceeecCCCCEEEEEe
Q 003886 154 TGASAVVPSPS---GSKLLVVRNPENESPIQFELWS--Q-SQLE-KEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 226 (789)
Q Consensus 154 ~~~~~~~~SPd---G~~la~~~~~~~~~~~~~~i~~--~-~~~~-~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~ 226 (789)
..+...+|||+ |++|+.....+ .+.+|+ . +... ..... ..+.| ..+.|+|||+.|+..+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~---h~~~v------~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQQM---HTGPV------LDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTS-----EEEEEEECTTSCEEEEEEEE---CSSCE------EEEEECTTSSEEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCC-----cEEEEEcCCCCceeEEEecc---ccCCE------EEEEECcCCCEEEEEc
Confidence 46889999999 68888776543 455662 2 3332 22221 12222 7899999999998764
Q ss_pred ecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEE--ee
Q 003886 227 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW--AP 304 (789)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~w--SP 304 (789)
.+ ..|.+||+.+++...+ ......+..+.| +|
T Consensus 106 ~d--------------------------------------------g~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~ 139 (368)
T 3mmy_A 106 CD--------------------------------------------KTAKMWDLSSNQAIQI--AQHDAPVKTIHWIKAP 139 (368)
T ss_dssp TT--------------------------------------------SEEEEEETTTTEEEEE--EECSSCEEEEEEEECS
T ss_pred CC--------------------------------------------CcEEEEEcCCCCceee--ccccCceEEEEEEeCC
Confidence 32 5799999999987776 344556788999 88
Q ss_pred CCCCCccEEEEEe
Q 003886 305 LNEGLHQYLVFVG 317 (789)
Q Consensus 305 Dg~~~~~~l~f~~ 317 (789)
|++. |+..+
T Consensus 140 ~~~~----l~~~~ 148 (368)
T 3mmy_A 140 NYSC----VMTGS 148 (368)
T ss_dssp SCEE----EEEEE
T ss_pred CCCE----EEEcc
Confidence 8886 66555
No 365
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.97 E-value=7.8e-08 Score=116.06 Aligned_cols=175 Identities=11% Similarity=0.025 Sum_probs=102.9
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (789)
++|||+.+|... ..+.+.+++.. ..+........ ..+...+||| |++|+..+.++ .+.
T Consensus 25 fspdg~~lAsgs---------~Dg~I~lw~~~--~~~~~~~~~~~-----~~V~~l~fsp-g~~L~S~s~D~-----~v~ 82 (902)
T 2oaj_A 25 FDFTQNLLAIAT---------VTGEVHIYGQQ--QVEVVIKLEDR-----SAIKEMRFVK-GIYLVVINAKD-----TVY 82 (902)
T ss_dssp EETTTTEEEEEE---------TTSEEEEECST--TCEEEEECSSC-----CCEEEEEEET-TTEEEEEETTC-----EEE
T ss_pred ECCCCCEEEEEe---------CCCEEEEEeCC--CcEEEEEcCCC-----CCEEEEEEcC-CCEEEEEECcC-----eEE
Confidence 468888776542 23456666542 22211111111 4588999999 88888776543 567
Q ss_pred Eec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCC-----------CCCcCC
Q 003886 184 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG-----------SSDKDC 250 (789)
Q Consensus 184 i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 250 (789)
+|+ .++....+... +.| ..+.|+|||++|+....+.... .|+....... .....+
T Consensus 83 lWd~~~~~~~~~~~~~----~~V------~~v~~sp~g~~l~sgs~dg~V~--lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 83 VLSLYSQKVLTTVFVP----GKI------TSIDTDASLDWMLIGLQNGSMI--VYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp EEETTTCSEEEEEECS----SCE------EEEECCTTCSEEEEEETTSCEE--EEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred EEECCCCcEEEEEcCC----CCE------EEEEECCCCCEEEEEcCCCcEE--EEECCCCccccceeccccccccccccC
Confidence 773 44444333322 223 7899999999999887665432 3332221110 112334
Q ss_pred CCCCCcceeeCCc-ccccCCccCceEEEEEccCCceEec-cCC-----CC-----------CCccceEEEeeCCCCCccE
Q 003886 251 NSWKGQGDWEEDW-GETYAGKRQPSLFVININSGEVQAV-KGI-----PK-----------SLSVGQVVWAPLNEGLHQY 312 (789)
Q Consensus 251 ~~~~~~~~~~~d~-g~~~~~~~~~~l~v~d~~~g~~~~l-~~~-----~~-----------~~~~~~~~wSPDg~~~~~~ 312 (789)
...+....|.|+. +..+++..+..| +||+.+++.... ... +. ...+..++|+|||+.
T Consensus 151 ~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~---- 225 (902)
T 2oaj_A 151 LSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH---- 225 (902)
T ss_dssp CCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE----
T ss_pred CCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE----
Confidence 4555567788853 344556667788 999998876533 111 00 134778999999997
Q ss_pred EEEEe
Q 003886 313 LVFVG 317 (789)
Q Consensus 313 l~f~~ 317 (789)
|+..+
T Consensus 226 lasgs 230 (902)
T 2oaj_A 226 IITIH 230 (902)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77665
No 366
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.96 E-value=9.3e-10 Score=123.86 Aligned_cols=131 Identities=19% Similarity=0.201 Sum_probs=89.9
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchh-hH--HHH-HHHH-HCCcEEEEEcCCCCC-CCCc--hhhc
Q 003886 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSL-AFLS-SVGYSLLIVNYRGSL-GFGE--EALQ 641 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~--~~~-~~la-~~Gy~V~~~d~rGs~-G~G~--~~~~ 641 (789)
+.|...+ .++.|.+....++.|+||++|||+....... +. ..+ ..++ ..|++|+.+|||.++ |+.. +...
T Consensus 94 sedcl~l--~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 171 (534)
T 1llf_A 94 SEDCLTI--NVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA 171 (534)
T ss_dssp CSCCCEE--EEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeEE--EEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc
Confidence 3455554 5778875445678999999999987544332 21 111 1222 468999999999532 3321 1111
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhC--------CCceeEEEEeCCc
Q 003886 642 SLPGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPL 705 (789)
Q Consensus 642 ~~~~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~--------p~~~~a~v~~~pv 705 (789)
.. .+...+.|+.++++|+.++. ..|++||+|+|+|+||+++..++... +.+|+++|+.+|.
T Consensus 172 ~~---~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 172 EG---SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HT---CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cC---CCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 11 23345899999999998852 36999999999999999888776653 4689999999984
No 367
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.96 E-value=1.6e-10 Score=130.72 Aligned_cols=112 Identities=24% Similarity=0.286 Sum_probs=83.0
Q ss_pred CcEEEEEcCCCCCCCchhh-HHHHHHHHHCCcEEEEEcCCCC-CCCCchhhccCCCCCCcccHHHHHHHHHHHHHcC---
Q 003886 592 DPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGS-LGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG--- 666 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~-~~~~~~la~~Gy~V~~~d~rGs-~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~--- 666 (789)
.|+||++|||+........ ......|+++|++|+.+|||.+ .|+...... ...+...+.|+.++++|+.++.
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~---~~~~n~gl~D~~~al~wv~~~i~~f 191 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNST---SVPGNAGLRDMVTLLKWVQRNAHFF 191 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSS---SCCSCHHHHHHHHHHHHHHHHTGGG
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCccc---CCCCchhHHHHHHHHHHHHHHHHHh
Confidence 8999999998864333221 1234567889999999999942 244332211 1233455899999999998862
Q ss_pred CCCCccEEEEEcCccHHHHHHHHHh--CCCceeEEEEeCCcc
Q 003886 667 LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLC 706 (789)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~~~~--~p~~~~a~v~~~pv~ 706 (789)
..|++||+|+|+|.||.++..++.. .+.+|+++|+.+|..
T Consensus 192 ggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 192 GGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred CCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 3699999999999999999988875 356899999999863
No 368
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.95 E-value=1.7e-08 Score=119.84 Aligned_cols=236 Identities=12% Similarity=0.128 Sum_probs=142.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCC--CCEEEEEeecC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEP 229 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpD--g~~la~~~~~~ 229 (789)
+.+..++|||||++|+.....+ .+.+|+ .+....+..+. +..+.| ..+.|+|+ |+.|+..+.+
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg-----~I~vwd~~~~~~~~~~~l~-~h~~~V------~~l~~s~~~~~~~l~s~s~D- 76 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDK-----TIKIFEVEGETHKLIDTLT-GHEGPV------WRVDWAHPKFGTILASCSYD- 76 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTT-----EEEEEEEETTEEEEEEEEC-CCSSCE------EEEEECCTTSCSEEEEEETT-
T ss_pred ceeEEEEECCCCCeEEEEECCC-----cEEEEecCCCCCccceecc-CCcCce------EEEEecCCCCCCEEEEEeCC-
Confidence 4588899999999999876543 455662 22222222222 223334 78999998 8888876543
Q ss_pred CCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccC-CCCCCccceEEEeeC--C
Q 003886 230 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPL--N 306 (789)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~-~~~~~~~~~~~wSPD--g 306 (789)
..|.+||+.+++...+.. ......+..+.|+|+ |
T Consensus 77 -------------------------------------------g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~ 113 (753)
T 3jro_A 77 -------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 113 (753)
T ss_dssp -------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred -------------------------------------------CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCC
Confidence 568999999886322210 233456789999999 7
Q ss_pred CCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecC-----
Q 003886 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP----- 381 (789)
Q Consensus 307 ~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp----- 381 (789)
+. ++..+ .+..|.++|+... .......+..+...+....|+|
T Consensus 114 ~~----l~sgs---------------~dg~I~vwdl~~~--------------~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 114 PL----LLVAS---------------SDGKVSVVEFKEN--------------GTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp SE----EEEEE---------------TTSEEEEEECCSS--------------SCCCCEEEECCSSCEEEEEECCCC---
T ss_pred CE----EEEEe---------------CCCcEEEEEeecC--------------CCcceeEeecCCCceEEEEecCccccc
Confidence 76 66555 2336888887210 1123344556666788899999
Q ss_pred --------CCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcccc
Q 003886 382 --------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 453 (789)
Q Consensus 382 --------DG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~ 453 (789)
||+.|+..+.+. .|++||+.++.... ........ ....+..+.|+|
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg-----------~I~iwd~~~~~~~~------~~~~~~~~---------h~~~V~~l~~sp 214 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLEG---------HSDWVRDVAWSP 214 (753)
T ss_dssp ------CGGGCCEEEEETTS-----------CEEEEEEETTTTEE------EEEEEECC---------CSSCEEEEEECC
T ss_pred ccccccCCCCCEEEEEECCC-----------eEEEEeccCCcccc------eeeeeecC---------CCCcEEEEEecc
Confidence 688888777543 48899887653210 11111100 011345678999
Q ss_pred C---CCEEEEEEEeCCeEEEEEEECCCCcE--E-EecC---CCCCceeEEeeecCCEEEEEEe
Q 003886 454 D---GCTMLLSSIWGSSQVIISVNVSSGEL--L-RITP---AESNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 454 D---g~~l~~~~~~~~~~~l~~~dl~tg~~--~-~lt~---~~~~~~~~~~s~dg~~l~~~~s 507 (789)
+ ++ +++++..++...+|.++ +++. . .+.. ....+....|+++|+.++....
T Consensus 215 ~~~~~~-~l~s~s~Dg~I~iwd~~--~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 215 TVLLRS-YLASVSQDRTCIIWTQD--NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp CCSSSE-EEEEEESSSCEEEEEES--SSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred CCCCCC-EEEEEecCCEEEEecCC--CCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 9 55 55677777776666554 4421 1 1111 1223344578898887655443
No 369
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.95 E-value=4.5e-08 Score=102.35 Aligned_cols=239 Identities=16% Similarity=0.110 Sum_probs=137.1
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
.+...+|||+|++||..+..+ .+.+|+ .++..+....... ....++++++.|+..+.+....
T Consensus 69 ~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~~~~h~~-----------~~~~~~~~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTSHSA-----------RVGSLSWNSYILSSGSRSGHIH 132 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSS-----------CEEEEEEETTEEEEEETTSEEE
T ss_pred eEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEEecCccc-----------eEEEeecCCCEEEEEecCCceE
Confidence 478899999999999876654 567773 4443333322111 2356777788777655443211
Q ss_pred CCCccCCCC-CCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEecc---CCCCCCccceEEEeeCCCC
Q 003886 233 KPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK---GIPKSLSVGQVVWAPLNEG 308 (789)
Q Consensus 233 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~---~~~~~~~~~~~~wSPDg~~ 308 (789)
.+..... ........+........+.++....+++..+..|.+||+.+++..... .......+....|+|++..
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 210 (318)
T 4ggc_A 133 --HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN 210 (318)
T ss_dssp --EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT
T ss_pred --eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc
Confidence 1110000 000111122222223345555444445556788999999887532110 0222335678899999998
Q ss_pred CccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEE
Q 003886 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 388 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~ 388 (789)
++..+... ....|.++|. ...................|+|+++.++.
T Consensus 211 ----~~~~~~~~------------~~~~i~lwd~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 211 ----VLATGGGT------------SDRHIRIWNV-----------------CSGACLSAVDAHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp ----EEEEEECT------------TTCEEEEEET-----------------TTCCEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred ----EEEEEecC------------CCCEEEEEec-----------------ccccccccccceeeeeeeeecccccceEE
Confidence 77654221 2235777776 34444444444455778899999999988
Q ss_pred EecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeE
Q 003886 389 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (789)
Q Consensus 389 ~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (789)
.+... ...|++||+.+++......+. ...+..+.|+|||+.| +++..++..
T Consensus 258 ~sg~~---------d~~i~iwd~~~~~~~~~l~gH-------------------~~~V~~l~~spdg~~l-~S~s~D~~v 308 (318)
T 4ggc_A 258 GHGFA---------QNQLVIWKYPTMAKVAELKGH-------------------TSRVLSLTMSPDGATV-ASAAADETL 308 (318)
T ss_dssp EECTT---------TCCEEEEETTTCCEEEEECCC-------------------SSCEEEEEECTTSSCE-EEEETTTEE
T ss_pred EEEcC---------CCEEEEEECCCCcEEEEEcCC-------------------CCCEEEEEEcCCCCEE-EEEecCCeE
Confidence 76432 246999999876542111111 1134567899999855 677777877
Q ss_pred EEEEE
Q 003886 469 VIISV 473 (789)
Q Consensus 469 ~l~~~ 473 (789)
.||.+
T Consensus 309 ~iWd~ 313 (318)
T 4ggc_A 309 RLWRC 313 (318)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 77743
No 370
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.95 E-value=1.7e-07 Score=99.06 Aligned_cols=236 Identities=14% Similarity=0.094 Sum_probs=134.6
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~ 234 (789)
...|+|+|+++.|+++...+ .+++.++ .+++. +.+..+..+ ..+.|+|||+.++.. .
T Consensus 51 ~egp~~~~~~~~l~~~d~~~---~~i~~~d~~~~~~-~~~~~~~~v----------~~i~~~~dg~l~v~~--~------ 108 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILE---RELHELHLASGRK-TVHALPFMG----------SALAKISDSKQLIAS--D------ 108 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGG---TEEEEEETTTTEE-EEEECSSCE----------EEEEEEETTEEEEEE--T------
T ss_pred CcCCeEeCCCCEEEEEECCC---CEEEEEECCCCcE-EEEECCCcc----------eEEEEeCCCeEEEEE--C------
Confidence 35789999999998886442 3577777 44443 333333333 688999999865542 1
Q ss_pred CccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCC---CCccceEEEeeCCCCCcc
Q 003886 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSPDg~~~~~ 311 (789)
..|+++|+++|+.+.+..... ...+..+.++|||+
T Consensus 109 --------------------------------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~---- 146 (326)
T 2ghs_A 109 --------------------------------------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA---- 146 (326)
T ss_dssp --------------------------------------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC----
T ss_pred --------------------------------------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC----
Confidence 248999999988776632211 12456789999997
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEec
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~ 391 (789)
+++....... ......||+++ . ++.+.+.........++|||||+.|++...
T Consensus 147 -l~v~~~~~~~--------~~~~~~l~~~~-~------------------g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 147 -LWIGTMGRKA--------ETGAGSIYHVA-K------------------GKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp -EEEEEEETTC--------CTTCEEEEEEE-T------------------TEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred -EEEEeCCCcC--------CCCceEEEEEe-C------------------CcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 5555422110 01224688887 2 223333322233457899999999887653
Q ss_pred CCCCCCCCccccceeEEeecC--CC-CCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeE
Q 003886 392 KSSVDSGAHSATDSLHRIDWP--TN-GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (789)
Q Consensus 392 ~~~~~~g~~~~~~~L~~~d~~--~~-~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (789)
.. ..|+++|+. ++ .... ...+..+ ..... ....+.+.+||+ |++..... .
T Consensus 199 ~~----------~~I~~~d~~~~~Gl~~~~----~~~~~~~---~~~~~-------~p~gi~~d~~G~-lwva~~~~--~ 251 (326)
T 2ghs_A 199 KV----------NRLMRVPLDARTGLPTGK----AEVFIDS---TGIKG-------GMDGSVCDAEGH-IWNARWGE--G 251 (326)
T ss_dssp TT----------CEEEEEEBCTTTCCBSSC----CEEEEEC---TTSSS-------EEEEEEECTTSC-EEEEEETT--T
T ss_pred CC----------CEEEEEEcccccCCcccC----ceEEEEC---CCCCC-------CCCeeEECCCCC-EEEEEeCC--C
Confidence 32 469999986 43 2110 0011110 00001 112456778886 65554322 3
Q ss_pred EEEEEECCCCcEEEecCCCCCceeEEee-ecCCEEEEEEeCCC
Q 003886 469 VIISVNVSSGELLRITPAESNFSWSLLT-LDGDNIIAVSSSPV 510 (789)
Q Consensus 469 ~l~~~dl~tg~~~~lt~~~~~~~~~~~s-~dg~~l~~~~ss~~ 510 (789)
.|+++|.++..+..+...........|+ ++++.|+++.....
T Consensus 252 ~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 252 AVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred EEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 5888888444444554333334445676 77787777665543
No 371
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.94 E-value=6e-08 Score=103.44 Aligned_cols=238 Identities=14% Similarity=0.094 Sum_probs=126.7
Q ss_pred eeEEEEEEeecCCCCccceeecCCcceecccEEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccc
Q 003886 126 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 202 (789)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g 202 (789)
...+.++++.. +.....+.... ..+....|+| +|+.|+.....+ .+.+| ..++....+.......+
T Consensus 94 dg~i~v~d~~~-~~~~~~~~~~~-----~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 94 RGIIRIINPIT-MQCIKHYVGHG-----NAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp TCEEEEECTTT-CCEEEEEESCC-----SCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEEEEEECSTTSCSS
T ss_pred CCEEEEEEchh-ceEeeeecCCC-----CcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeEEEEecccccccC
Confidence 34677776532 22222333222 4588999999 899888876543 35566 33444433321112222
Q ss_pred cccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccC
Q 003886 203 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 282 (789)
Q Consensus 203 ~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~ 282 (789)
.+ ..+.|+|||+.|+..+.+ ..|.+||+.+
T Consensus 163 ~v------~~~~~~~~~~~l~~~~~d--------------------------------------------g~i~i~d~~~ 192 (366)
T 3k26_A 163 EV------LSADYDLLGEKIMSCGMD--------------------------------------------HSLKLWRINS 192 (366)
T ss_dssp CE------EEEEECTTSSEEEEEETT--------------------------------------------SCEEEEESCS
T ss_pred ce------eEEEECCCCCEEEEecCC--------------------------------------------CCEEEEECCC
Confidence 23 789999999998876543 3455666555
Q ss_pred CceEecc---------------------------CCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCc
Q 003886 283 GEVQAVK---------------------------GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (789)
Q Consensus 283 g~~~~l~---------------------------~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~ 335 (789)
++..... .......+..+.|+ ++. |+..+ ...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~----l~~~~---------------~d~ 251 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL----ILSKS---------------CEN 251 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE----EEEEC---------------SSS
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE----EEEEe---------------cCC
Confidence 4321100 01123456678888 554 55444 223
Q ss_pred ceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCC--CCEEEEEecCCCCCCCCccccceeEEeecCC
Q 003886 336 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPD--GKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (789)
Q Consensus 336 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpD--G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~ 413 (789)
.|.++|+......-.... ...........+..+...+...+|||| |+.|+..+.+. .|++||+.+
T Consensus 252 ~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg-----------~i~vwd~~~ 318 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIK--PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG-----------KLYVWDLEV 318 (366)
T ss_dssp EEEEEEESSTTCCGGGCC--TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS-----------CEEEEECCS
T ss_pred EEEEEeCCCccccccccc--cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC-----------cEEEEECCC
Confidence 577777632100000000 000000113344445566888999999 99888776442 599999987
Q ss_pred CCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003886 414 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (789)
Q Consensus 414 ~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (789)
+...... +..+... . ....+..+.|+|||+.| +++..++...+|.
T Consensus 319 ~~~~~~~-----~~~~~~~----~----~~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd 363 (366)
T 3k26_A 319 EDPHKAK-----CTTLTHH----K----CGAAIRQTSFSRDSSIL-IAVCDDASIWRWD 363 (366)
T ss_dssp SSGGGCE-----EEEECCT----T----CCSCEEEEEECTTSSEE-EEEETTSEEEEEE
T ss_pred CCCcccc-----ceEEccc----c----cCCceEEEEeCCCCCeE-EEEeCCCEEEEEE
Confidence 6542100 0000000 0 01234577899999865 5556666655654
No 372
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.94 E-value=1.6e-07 Score=103.10 Aligned_cols=230 Identities=12% Similarity=0.085 Sum_probs=133.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
.+...+|||||++||..+..+ .+.+|+ .++..+... +..+ .-.++++|++.|+..+.
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~---~h~~--------~v~~~s~~~~~l~sgs~----- 207 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMT---SHSA--------RVGSLSWNSYILSSGSR----- 207 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSS--------CEEEEEEETTEEEEEET-----
T ss_pred cEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEe---CCCC--------ceEEEeeCCCEEEEEeC-----
Confidence 488999999999999876654 466773 333333222 1111 12334556776665433
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCce--EeccCCCCCCccceEEEeeCCCCCc
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGLH 310 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (789)
...+.++|...... ..+ ......+....|+|+|+.
T Consensus 208 ---------------------------------------d~~i~~~d~~~~~~~~~~~--~~h~~~~~~~~~~~~g~~-- 244 (420)
T 4gga_A 208 ---------------------------------------SGHIHHHDVRVAEHHVATL--SGHSQEVCGLRWAPDGRH-- 244 (420)
T ss_dssp ---------------------------------------TSEEEEEETTSSSCEEEEE--ECCSSCEEEEEECTTSSE--
T ss_pred ---------------------------------------CCceeEeeecccceeeEEe--cccccceeeeeecCCCCe--
Confidence 24677777665432 233 222335668899999997
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEe
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s 390 (789)
++..+. +..+.+++..... ...........+...+...+|+|++..++.+.
T Consensus 245 --l~s~~~---------------D~~v~i~~~~~~~------------~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 245 --LASGGN---------------DNLVNVWPSAPGE------------GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp --EEEEET---------------TSCEEEEESSCCS------------SCSCCSEEECCCSSCEEEEEECTTCTTEEEEE
T ss_pred --eeeeec---------------cccceEEeecccc------------ccceeeeeecccCCceeeeeeCCCcccEEEEE
Confidence 776652 2356677762100 01112334455566788899999988776654
Q ss_pred cCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEE
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (789)
... ....|.+||+.++......... ..+....|+++++.++..+. .....|
T Consensus 296 ~gs--------~D~~I~iwd~~t~~~~~~~~~~--------------------~~v~~~~~~~~~~~lv~~sg-~~d~~I 346 (420)
T 4gga_A 296 GGT--------SDRHIRIWNVCSGACLSAVDAH--------------------SQVCSILWSPHYKELISGHG-FAQNQL 346 (420)
T ss_dssp ECT--------TTCEEEEEETTTTEEEEEEECS--------------------SCEEEEEEETTTTEEEEEEC-TTTCCE
T ss_pred eec--------CCCEEEEEeCCccccceeeccc--------------------cceeeeeecCCCCeEEEEEe-cCCCEE
Confidence 221 1246999998875542111000 12335679999998866542 223346
Q ss_pred EEEECCCCcEEEecCCC-CCceeEEeeecCCEEEEEE
Q 003886 471 ISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 471 ~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~ 506 (789)
..+|+.+++......++ ..+....|++||+.|+...
T Consensus 347 ~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 347 VIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAA 383 (420)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 66688788765544433 3455567899988765433
No 373
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.93 E-value=6.8e-08 Score=101.87 Aligned_cols=195 Identities=12% Similarity=0.085 Sum_probs=111.1
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCcc---ceeecCCcceecccEEEEeCC--CCCeEEEEecCCCC
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV---TFQWAPFPVEMTGASAVVPSP--SGSKLLVVRNPENE 177 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~lt~~~~~~~~~~~~~~~~SP--dG~~la~~~~~~~~ 177 (789)
.++|||+.++... ..+.+.++++........ .+.... ..+...+|+| ||+.|+.....+
T Consensus 18 ~~~~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~d~~~l~s~~~dg-- 81 (351)
T 3f3f_A 18 VYDFYGRHVATCS---------SDQHIKVFKLDKDTSNWELSDSWRAHD-----SSIVAIDWASPEYGRIIASASYDK-- 81 (351)
T ss_dssp EECSSSSEEEEEE---------TTSEEEEEEECSSSCCEEEEEEEECCS-----SCEEEEEECCGGGCSEEEEEETTS--
T ss_pred EEcCCCCEEEEee---------CCCeEEEEECCCCCCcceecceeccCC-----CcEEEEEEcCCCCCCEEEEEcCCC--
Confidence 3468998776542 234566666643322211 122222 4588999999 699998876643
Q ss_pred CCeEEEEe--cCCce-------eEEEecCCCccccccCCCcccceeecCC--CCEEEEEeecCCCCCCCccCCCCCCCCC
Q 003886 178 SPIQFELW--SQSQL-------EKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSS 246 (789)
Q Consensus 178 ~~~~~~i~--~~~~~-------~~~~~~~~~~~g~v~~d~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~ 246 (789)
.+.+| ..++. ..+.... ...+.+ ..+.|+|+ ++.|+..+.+
T Consensus 82 ---~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v------~~~~~~~~~~~~~l~~~~~d------------------ 133 (351)
T 3f3f_A 82 ---TVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSL------YSVKFAPAHLGLKLACLGND------------------ 133 (351)
T ss_dssp ---CEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCE------EEEEECCGGGCSEEEEEETT------------------
T ss_pred ---eEEEEecCCCcccccccCcceeeeec-ccCCce------eEEEEcCCCCCcEEEEecCC------------------
Confidence 34455 22211 2222221 222223 78999999 9988876443
Q ss_pred CcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEec----------c--CCCCCCccceEEEeeC---CCCCcc
Q 003886 247 DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV----------K--GIPKSLSVGQVVWAPL---NEGLHQ 311 (789)
Q Consensus 247 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l----------~--~~~~~~~~~~~~wSPD---g~~~~~ 311 (789)
..|.+||+.+++.... . .......+..+.|+|+ ++.
T Consensus 134 --------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--- 184 (351)
T 3f3f_A 134 --------------------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK--- 184 (351)
T ss_dssp --------------------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE---
T ss_pred --------------------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE---
Confidence 4677888776643211 0 0122335678999998 664
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC---eeecCCCCCccCcceecCCC----C
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDG----K 384 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~Lt~~~~~~~~p~~SpDG----~ 384 (789)
|+..+. . ..+...+. ..+. ...+..+...+...+|+|+| +
T Consensus 185 -l~~~~~-~--------------~~~~~~~~-----------------~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~ 231 (351)
T 3f3f_A 185 -LAVSAL-E--------------QAIIYQRG-----------------KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQ 231 (351)
T ss_dssp -EEEEET-T--------------EEEEEEEC-----------------TTSCEEEEEECCCCCSCEEEEEECCCSSCSSE
T ss_pred -EEEecC-C--------------CcEEEEcc-----------------CCCceeeeeecCCCCcceeEEEECCCCCCcce
Confidence 555441 1 12333332 2233 34455566678899999999 6
Q ss_pred EEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 385 FLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 385 ~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
.|+..+.+. .|.+||+..+
T Consensus 232 ~l~s~~~dg-----------~i~iwd~~~~ 250 (351)
T 3f3f_A 232 LIATGCKDG-----------RIRIFKITEK 250 (351)
T ss_dssp EEEEEETTS-----------CEEEEEEEEC
T ss_pred EEEEEcCCC-----------eEEEEeCCCC
Confidence 666655442 4888887654
No 374
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.93 E-value=1.1e-09 Score=124.72 Aligned_cols=118 Identities=17% Similarity=0.167 Sum_probs=83.5
Q ss_pred CCCCcEEEEEcCCCCCCCchh-hHHHHHHHHH-CCcEEEEEcCC-CCCCCCchhhc----cCCCCCCcccHHHHHHHHHH
Q 003886 589 CSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSS-VGYSLLIVNYR-GSLGFGEEALQ----SLPGKVGSQDVNDVLTAIDH 661 (789)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~-~~~~~~~la~-~Gy~V~~~d~r-Gs~G~G~~~~~----~~~~~~~~~~~~D~~~~i~~ 661 (789)
.++.|+||++|||+....... .......|++ .|++|+.+||| |.-||...... ......+...+.|+.++++|
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 467899999999886543332 1122345654 78999999999 54455432100 01122334448899999999
Q ss_pred HHHcC---CCCCccEEEEEcCccHHHHHHHHHhC--CCceeEEEEeCCcc
Q 003886 662 VIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 706 (789)
Q Consensus 662 l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~--p~~~~a~v~~~pv~ 706 (789)
+.++. ..|+++|.|+|+|.||.++..++... ..+|+++|+.+|..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 99863 36899999999999999998887742 36899999999864
No 375
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=98.93 E-value=3.4e-09 Score=110.82 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=75.8
Q ss_pred CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHH-HHHHcC
Q 003886 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID-HVIDMG 666 (789)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~-~l~~~~ 666 (789)
.....|.||++||.+.+.....|......|. .+|.|+.+|++| +|.+.. ....++++.+.+. .+.+.
T Consensus 63 ~~~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G---~G~s~~-------~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 63 DGPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPG---YEEGEP-------LPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CCSCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTT---SSTTCC-------BCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh-
Confidence 3456789999999776432356666666664 469999999998 444321 1224555555443 45444
Q ss_pred CCCCccEEEEEcCccHHHHHHHHHhCC---CceeEEEEeCCcc
Q 003886 667 LANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLC 706 (789)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~~~~~p---~~~~a~v~~~pv~ 706 (789)
.+.+++.|+|||+||.+++.++.++| ++++++|+.++..
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~ 172 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYP 172 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCC
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCC
Confidence 45578999999999999999999987 4899999998864
No 376
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.92 E-value=3.6e-08 Score=103.69 Aligned_cols=247 Identities=11% Similarity=0.096 Sum_probs=138.1
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCC-ccceeecCCcceecccEEEEeCCC--CCeEEEEecCCCCCCe
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPI 180 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~~ 180 (789)
.+|||++++-.. ..+.+.++++...... ...+..+. +.+...+|+|+ |+.|+..+..+
T Consensus 21 ~s~~g~~lasgs---------~D~~v~lwd~~~~~~~~~~~l~gH~-----~~V~~v~~~~~~~~~~l~s~s~D~----- 81 (316)
T 3bg1_A 21 MDYYGTRLATCS---------SDRSVKIFDVRNGGQILIADLRGHE-----GPVWQVAWAHPMYGNILASCSYDR----- 81 (316)
T ss_dssp ECGGGCEEEEEE---------TTTEEEEEEEETTEEEEEEEEECCS-----SCEEEEEECCGGGSSCEEEEETTS-----
T ss_pred EcCCCCEEEEEe---------CCCeEEEEEecCCCcEEEEEEcCCC-----ccEEEEEeCCCCCCCEEEEEECCC-----
Confidence 368888775432 2345666665332111 12233232 45888999974 88888876553
Q ss_pred EEEEec--CCceeEEEecCCCccccccCCCcccceeecCC--CCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCc
Q 003886 181 QFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 256 (789)
Q Consensus 181 ~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (789)
...+|+ .++......+. +..+.| ..++|+|| |+.|+..+.+
T Consensus 82 ~v~iWd~~~~~~~~~~~~~-~h~~~V------~~v~~~p~~~g~~lasgs~D---------------------------- 126 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHA-GHDSSV------NSVCWAPHDYGLILACGSSD---------------------------- 126 (316)
T ss_dssp CEEEECCSSSCCCEEEEEC-CCSSCC------CEEEECCTTTCSCEEEECSS----------------------------
T ss_pred EEEEEECCCCcceEEEEcc-CCCCce------EEEEECCCCCCcEEEEEcCC----------------------------
Confidence 466773 33322332221 122223 78999998 7777765433
Q ss_pred ceeeCCcccccCCccCceEEEEEccCCc-eEeccC-CCCCCccceEEEeeCC-----------------CCCccEEEEEe
Q 003886 257 GDWEEDWGETYAGKRQPSLFVININSGE-VQAVKG-IPKSLSVGQVVWAPLN-----------------EGLHQYLVFVG 317 (789)
Q Consensus 257 ~~~~~d~g~~~~~~~~~~l~v~d~~~g~-~~~l~~-~~~~~~~~~~~wSPDg-----------------~~~~~~l~f~~ 317 (789)
..|.+||+.++. ...... ......+..+.|+|++ +. |+..+
T Consensus 127 ----------------~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~sgs 186 (316)
T 3bg1_A 127 ----------------GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKR----FASGG 186 (316)
T ss_dssp ----------------SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCB----EECCB
T ss_pred ----------------CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccce----EEEec
Confidence 467888887653 211110 1223356788999984 33 33322
Q ss_pred ecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC---CeeecCCCCCccCcceecCCC----CEEEEEe
Q 003886 318 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSPDG----KFLVFLS 390 (789)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~Lt~~~~~~~~p~~SpDG----~~la~~s 390 (789)
.+..|.++|+. ..+ ....+..+...+...+||||| +.|+..+
T Consensus 187 ---------------~D~~v~lWd~~----------------~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 187 ---------------CDNLIKLWKEE----------------EDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp ---------------TTSBCCEEEEC----------------TTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred ---------------CCCeEEEEEeC----------------CCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 22345566651 121 234566667778899999997 6777666
Q ss_pred cCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEE
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (789)
.+. .|.+||+.+........ .+.. . +...+..+.|+|||+.| +++..++...|
T Consensus 236 ~D~-----------~v~iw~~~~~~~~~~~~---~~~~--------~----~~~~v~~v~~sp~g~~l-as~~~D~~v~l 288 (316)
T 3bg1_A 236 QDG-----------RVFIWTCDDASSNTWSP---KLLH--------K----FNDVVWHVSWSITANIL-AVSGGDNKVTL 288 (316)
T ss_dssp TTC-----------EEEEEECSSTTCCCCBC---CEEE--------E----CSSCEEEEEECTTTCCE-EEEESSSCEEE
T ss_pred CCC-----------eEEEEEccCccccchhh---hhhh--------c----CCCcEEEEEEcCCCCEE-EEEcCCCeEEE
Confidence 543 58889886532110000 0000 0 01134567899999855 56667778888
Q ss_pred EEEECCCCcEEEe
Q 003886 471 ISVNVSSGELLRI 483 (789)
Q Consensus 471 ~~~dl~tg~~~~l 483 (789)
|..+. .|+..++
T Consensus 289 w~~~~-~g~~~~~ 300 (316)
T 3bg1_A 289 WKESV-DGQWVCI 300 (316)
T ss_dssp EEECT-TSCEEEE
T ss_pred EEECC-CCcEEEe
Confidence 87765 3554443
No 377
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.92 E-value=5.1e-09 Score=108.09 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=83.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCc-hhhH-HHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHH
Q 003886 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (789)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~-~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~ 653 (789)
+...++.|.. .+....+.||++||...+ . ..|. .....|.++||.|+++|++| +|.... ....+
T Consensus 50 L~~~i~~p~~-~~~~~~~pVVLvHG~~~~--~~~~w~~~l~~~L~~~Gy~V~a~DlpG---~G~~~~--------~~~~~ 115 (316)
T 3icv_A 50 LDAGLTCQGA-SPSSVSKPILLVPGTGTT--GPQSFDSNWIPLSAQLGYTPCWISPPP---FMLNDT--------QVNTE 115 (316)
T ss_dssp HHHTEEETTB-BTTBCSSEEEEECCTTCC--HHHHHTTTHHHHHHHTTCEEEEECCTT---TTCSCH--------HHHHH
T ss_pred HhhhEeCCCC-CCCCCCCeEEEECCCCCC--cHHHHHHHHHHHHHHCCCeEEEecCCC---CCCCcH--------HHHHH
Confidence 4444555633 233455678899996553 3 4565 67789999999999999987 443211 12356
Q ss_pred HHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC---CCceeEEEEeCCccc
Q 003886 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCN 707 (789)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~---p~~~~a~v~~~pv~~ 707 (789)
++.+.++.+++. ...+++.|+||||||.++.+++..+ +++++.+|+.+|...
T Consensus 116 ~la~~I~~l~~~--~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 116 YMVNAITTLYAG--SGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHHHH--TTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 778888888776 3457899999999999998877764 589999999998653
No 378
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.91 E-value=9.9e-09 Score=115.74 Aligned_cols=268 Identities=9% Similarity=-0.033 Sum_probs=138.0
Q ss_pred cccEEEEeCCC------CCeEEEEecCCCCCCeEEEEec--CCcee--EEEecC------CCccccccCCCcccceeecC
Q 003886 154 TGASAVVPSPS------GSKLLVVRNPENESPIQFELWS--QSQLE--KEFHVP------QTVHGSVYADGWFEGISWNS 217 (789)
Q Consensus 154 ~~~~~~~~SPd------G~~la~~~~~~~~~~~~~~i~~--~~~~~--~~~~~~------~~~~g~v~~d~~~~~~~wSp 217 (789)
+.+...+|||+ |+.||..+..+ ...+|+ .+... ...... .+.. ..+.+++|+|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~Dg-----tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~------~~v~sv~~s~ 276 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEG-----TINFLEIIDNATDVHVFKMCEKPSLTLSLAD------SLITTFDFLS 276 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTS-----CEEEEECCCCSSSSSEEECCCSCSEEECCTT------TCEEEEEESS
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCC-----eEEEEEcCCCccccccceeecCceEEEEcCC------CCEEEEEecC
Confidence 45788999997 56888776543 344552 22111 000000 0111 2337899999
Q ss_pred CCCEEEEEeecCCCCCCCccCCCCCCC-CCCcCCCCCCCcc--eeeCCc-ccccCCccCceEEEEEccCCceEe-ccCCC
Q 003886 218 DETLIAYVAEEPSPSKPTFSLGSTKGG-SSDKDCNSWKGQG--DWEEDW-GETYAGKRQPSLFVININSGEVQA-VKGIP 292 (789)
Q Consensus 218 Dg~~la~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~d~-g~~~~~~~~~~l~v~d~~~g~~~~-l~~~~ 292 (789)
++ .||..+.+.... .|+....... .....+...+... .|.++. ....++..+..|.+||+.+++... +.+..
T Consensus 277 ~~-~lasgs~DgtV~--lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~ 353 (524)
T 2j04_B 277 PT-TVVCGFKNGFVA--EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF 353 (524)
T ss_dssp SS-EEEEEETTSEEE--EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC
T ss_pred CC-eEEEEeCCCEEE--EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc
Confidence 75 687777665432 3332221111 1123344444444 356653 233456678899999998765322 21111
Q ss_pred CCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCC
Q 003886 293 KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS 372 (789)
Q Consensus 293 ~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~ 372 (789)
....+..++|+||++. ++..+. ...|.++|+. .......+..+..
T Consensus 354 ~~~~v~~v~fsp~~~~----l~s~~~---------------d~tv~lwd~~----------------~~~~~~~l~gH~~ 398 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYS----YIYSDG---------------ASSLRAVPSR----------------AAFAVHPLVSRET 398 (524)
T ss_dssp SCCSCCCEEEETTTTE----EEEECS---------------SSEEEEEETT----------------CTTCCEEEEECSS
T ss_pred ccCcccceEeCCCcCe----EEEeCC---------------CCcEEEEECc----------------ccccceeeecCCC
Confidence 1123567999999987 665542 2257778872 2233456777778
Q ss_pred ccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccc
Q 003886 373 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 452 (789)
Q Consensus 373 ~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws 452 (789)
.+...+|||||+.|+..+.+. .+.+||...+-........ .... . ..+..+.|+
T Consensus 399 ~V~sva~Sp~g~~l~Sgs~Dg-----------tv~lwd~~~~~~~~~~~~~-~~~~--------~------~~v~~v~~s 452 (524)
T 2j04_B 399 TITAIGVSRLHPMVLAGSADG-----------SLIITNAARRLLHGIKNSS-ATQK--------S------LRLWKWDYS 452 (524)
T ss_dssp CEEEEECCSSCCBCEEEETTT-----------EEECCBSCSSTTTCC-------CC--------C------CEEEECBCC
T ss_pred ceEEEEeCCCCCeEEEEECCC-----------EEEEEechHhhccccccCc-ccee--------e------eEEEEeccC
Confidence 889999999999988766443 5888887543111000000 0000 0 001256789
Q ss_pred cCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCC
Q 003886 453 SDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGD 500 (789)
Q Consensus 453 ~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~ 500 (789)
|||+.+-+ .+ ...++.++..+..+..+......+....|+|++.
T Consensus 453 p~g~~~~~---~~-~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~ 496 (524)
T 2j04_B 453 IKDDKYRI---DS-SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA 496 (524)
T ss_dssp SSSCEEEE---CC-CCCCCC-------------CCCSCCCEEECCSTT
T ss_pred CCCCeEEc---cC-CceecccccCCcceeeecCCCceEEEEECCCCCC
Confidence 99984421 22 1223333222333344444444555668999874
No 379
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.90 E-value=1e-06 Score=97.63 Aligned_cols=290 Identities=11% Similarity=0.074 Sum_probs=161.0
Q ss_pred hcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCC
Q 003886 121 LANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQ 198 (789)
Q Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~ 198 (789)
..+...+.+.++++.. +.....+.... +.+...+|+|++ .|+..+..+ .+.+| ..++....+.
T Consensus 136 ~sgs~dg~i~vwd~~~-~~~~~~~~~h~-----~~V~~l~~~~~~-~l~s~s~dg-----~i~vwd~~~~~~~~~~~--- 200 (464)
T 3v7d_B 136 ITGADDKMIRVYDSIN-KKFLLQLSGHD-----GGVWALKYAHGG-ILVSGSTDR-----TVRVWDIKKGCCTHVFE--- 200 (464)
T ss_dssp EEEETTSCEEEEETTT-TEEEEEECCCS-----SCEEEEEECSTT-EEEEEETTS-----CEEEEETTTTEEEEEEC---
T ss_pred EEEcCCCcEEEEECCC-CcEEEEEeCCC-----cCEEEEEEcCCC-EEEEEeCCC-----CEEEEECCCCcEEEEEC---
Confidence 3344556677777532 22222333232 568899999999 666555443 35666 3444333332
Q ss_pred CccccccCCCcccceeec--CCCCEEEEEeecCCCCCCCccCCCCCCCCCC-----------------------cCCCCC
Q 003886 199 TVHGSVYADGWFEGISWN--SDETLIAYVAEEPSPSKPTFSLGSTKGGSSD-----------------------KDCNSW 253 (789)
Q Consensus 199 ~~~g~v~~d~~~~~~~wS--pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~ 253 (789)
...+.| ..+.|+ |+++.|+..+.+.... .|+.......... ..+...
T Consensus 201 ~h~~~v------~~l~~~~~~~~~~l~s~s~d~~i~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 201 GHNSTV------RCLDIVEYKNIKYIVTGSRDNTLH--VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp CCSSCE------EEEEEEESSSCEEEEEEETTSCEE--EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred CCCCcc------EEEEEecCCCCCEEEEEcCCCcEE--EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 122222 677777 6888888877665432 2322111111000 000000
Q ss_pred CCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccC
Q 003886 254 KGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 333 (789)
Q Consensus 254 ~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~ 333 (789)
...+.++....+++..+..|.+||+.+++..... ......+..+.|+|||+. |+..+ .
T Consensus 273 --v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~----l~sg~---------------~ 330 (464)
T 3v7d_B 273 --VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKR----CISAS---------------M 330 (464)
T ss_dssp --EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEETTTTE----EEEEE---------------T
T ss_pred --EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCEEEEEEcCCCCE----EEEEe---------------C
Confidence 0112333333445556788999999988765441 233446788999999997 66555 2
Q ss_pred CcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCC
Q 003886 334 PCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (789)
Q Consensus 334 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~ 413 (789)
+..|+++|+. .+.....+..+...+....|+ ++.|+..+.+. .|.+||+.+
T Consensus 331 dg~i~vwd~~----------------~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg-----------~v~vwd~~~ 381 (464)
T 3v7d_B 331 DTTIRIWDLE----------------NGELMYTLQGHTALVGLLRLS--DKFLVSAAADG-----------SIRGWDAND 381 (464)
T ss_dssp TSCEEEEETT----------------TTEEEEEECCCSSCEEEEEEC--SSEEEEEETTS-----------EEEEEETTT
T ss_pred CCcEEEEECC----------------CCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCC-----------cEEEEECCC
Confidence 3368888872 233445666666667777776 57777666443 599999876
Q ss_pred CCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe-cCCCCCcee
Q 003886 414 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSW 492 (789)
Q Consensus 414 ~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~l-t~~~~~~~~ 492 (789)
+..... .. . ........|+++++.|+ ++. ++ .+..+|+.+|+..+. ...+. ...
T Consensus 382 ~~~~~~---------~~-~----------~~~~~~~~~~~~~~~l~-~~~-dg--~i~iwd~~~g~~~~~~~~~~~-~~v 436 (464)
T 3v7d_B 382 YSRKFS---------YH-H----------TNLSAITTFYVSDNILV-SGS-EN--QFNIYNLRSGKLVHANILKDA-DQI 436 (464)
T ss_dssp CCEEEE---------EE-C----------TTCCCEEEEEECSSEEE-EEE-TT--EEEEEETTTCCEEESCTTTTC-SEE
T ss_pred Cceeee---------ec-C----------CCCccEEEEEeCCCEEE-Eec-CC--eEEEEECCCCcEEehhhccCC-CcE
Confidence 442110 00 0 01123457899998554 443 44 466668889988764 22222 233
Q ss_pred EEeeecCCEEEEEEeCC
Q 003886 493 SLLTLDGDNIIAVSSSP 509 (789)
Q Consensus 493 ~~~s~dg~~l~~~~ss~ 509 (789)
..++.+++.+++..++.
T Consensus 437 ~~v~~~~~~l~~~~~~~ 453 (464)
T 3v7d_B 437 WSVNFKGKTLVAAVEKD 453 (464)
T ss_dssp EEEEEETTEEEEEEEET
T ss_pred EEEEecCCEEEEEEEeC
Confidence 45555677777766554
No 380
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.90 E-value=4.5e-08 Score=104.43 Aligned_cols=269 Identities=10% Similarity=-0.006 Sum_probs=138.3
Q ss_pred cCCCC---CceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCCCCCeEEEEecCCCCC
Q 003886 103 SGNGN---GTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENES 178 (789)
Q Consensus 103 ~~spd---g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~ 178 (789)
.++|| |+.++... ..+.+.++++...+... ..+.... ..+...+|||||++|+.....+
T Consensus 46 ~~~~~~~~g~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~~dg--- 108 (368)
T 3mmy_A 46 SFSPPTLPGNFLIAGS---------WANDVRCWEVQDSGQTIPKAQQMHT-----GPVLDVCWSDDGSKVFTASCDK--- 108 (368)
T ss_dssp EECCTTSSSEEEEEEE---------TTSEEEEEEECTTSCEEEEEEEECS-----SCEEEEEECTTSSEEEEEETTS---
T ss_pred EEcCCCCCceEEEEEC---------CCCcEEEEEcCCCCceeEEEecccc-----CCEEEEEECcCCCEEEEEcCCC---
Confidence 34577 57665432 23456666664423322 2333333 4588999999999999876554
Q ss_pred CeEEEEe--cCCceeEEEecCCCccccccCCCcccceee--cCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCC
Q 003886 179 PIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISW--NSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 254 (789)
Q Consensus 179 ~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~w--SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (789)
.+.+| ..++..+.......+ ..+.| +||++.|+..+.+.... .|+..............
T Consensus 109 --~v~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~l~~~~~dg~i~--vwd~~~~~~~~~~~~~~--- 171 (368)
T 3mmy_A 109 --TAKMWDLSSNQAIQIAQHDAPV----------KTIHWIKAPNYSCVMTGSWDKTLK--FWDTRSSNPMMVLQLPE--- 171 (368)
T ss_dssp --EEEEEETTTTEEEEEEECSSCE----------EEEEEEECSSCEEEEEEETTSEEE--EECSSCSSCSEEEECSS---
T ss_pred --cEEEEEcCCCCceeeccccCce----------EEEEEEeCCCCCEEEEccCCCcEE--EEECCCCcEEEEEecCC---
Confidence 56667 344444433322233 78999 99999888877655322 23322111111111000
Q ss_pred CcceeeCCcccccCCccCceEEEEEccCCceEecc-CCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccC
Q 003886 255 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 333 (789)
Q Consensus 255 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~-~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~ 333 (789)
............+.......+.+|++..+...... ............+.+++..... .++++. .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~ 236 (368)
T 3mmy_A 172 RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPT-GFALGS--------------I 236 (368)
T ss_dssp CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEE-EEEEEE--------------T
T ss_pred CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCC-eEEEec--------------C
Confidence 00011111112233344567888888765432211 1122233445556665543111 133331 2
Q ss_pred CcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCC------------CccCcceecCCCCEEEEEecCCCCCCCCcc
Q 003886 334 PCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI------------SSAFFPRFSPDGKFLVFLSAKSSVDSGAHS 401 (789)
Q Consensus 334 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~------------~~~~~p~~SpDG~~la~~s~~~~~~~g~~~ 401 (789)
...|.++++..... ......+..+. ..+...+|||||++|+..+.+.
T Consensus 237 dg~i~i~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-------- 295 (368)
T 3mmy_A 237 EGRVAIHYINPPNP-------------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-------- 295 (368)
T ss_dssp TSEEEEEESSCSCH-------------HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS--------
T ss_pred CCcEEEEecCCCCc-------------cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC--------
Confidence 23566666621000 01122222222 1477889999999988777543
Q ss_pred ccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEE
Q 003886 402 ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 463 (789)
Q Consensus 402 ~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~ 463 (789)
.|++||+.++........ ....+..+.|+|||+.|+..+.
T Consensus 296 ---~i~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 296 ---RFSFWDKDARTKLKTSEQ-------------------LDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp ---CEEEEETTTTEEEEECCC-------------------CSSCEEEEEECTTSSCEEEEEC
T ss_pred ---eEEEEECCCCcEEEEecC-------------------CCCCceEEEECCCCCeEEEEec
Confidence 599999887543211110 0113456789999997766554
No 381
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.90 E-value=3.5e-09 Score=109.63 Aligned_cols=102 Identities=17% Similarity=0.231 Sum_probs=79.0
Q ss_pred CCCcEEEEEcCCCCCCC---chhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcC
Q 003886 590 SCDPLIVVLHGGPHSVS---LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 666 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~---~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 666 (789)
+..|.||++||.++... ...|....+.|+++||.|+++|++| +|.+. ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g---~g~s~----------~~~~~~~~~i~~~~~~- 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQ---LDTSE----------VRGEQLLQQVEEIVAL- 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCS---SSCHH----------HHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCC---CCCch----------hhHHHHHHHHHHHHHH-
Confidence 34678999999776532 3366677889999999999999987 44432 2345666666666655
Q ss_pred CCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 667 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++.++|.|+|||+||.++..++.++|++++++|+.++..
T Consensus 71 -~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 -SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp -HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred -hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 345789999999999999999999999999999998853
No 382
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.88 E-value=4.3e-08 Score=108.20 Aligned_cols=205 Identities=8% Similarity=0.034 Sum_probs=128.4
Q ss_pred ccceeecC-CCCEEEEEeecCCCCCCCccCCCCCC--CCCCcCCCCCCCcceeeCC-cccccCCccCceEEEEEccCCce
Q 003886 210 FEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKG--GSSDKDCNSWKGQGDWEED-WGETYAGKRQPSLFVININSGEV 285 (789)
Q Consensus 210 ~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d-~g~~~~~~~~~~l~v~d~~~g~~ 285 (789)
+.+++|+| +++.||..+.+.... .|+...... ......+...+....|.|. ....+++..+..|.+||+.++..
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~--lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIM--LWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL 199 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEE--EECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEE--EEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce
Confidence 37899999 566788777665433 344322221 1223345566667788874 33455666778899999998876
Q ss_pred EeccCC-CCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe
Q 003886 286 QAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV 364 (789)
Q Consensus 286 ~~l~~~-~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 364 (789)
+.+... .....+..+.|+|||+. |+..+ ....|+++|+ .+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~----l~~g~---------------~dg~i~~wd~-----------------~~~~~ 243 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSRM----VVTGD---------------NVGNVILLNM-----------------DGKEL 243 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTTE----EEEEC---------------SSSBEEEEES-----------------SSCBC
T ss_pred eEEeccCCCCccEEEEEECCCCCE----EEEEe---------------CCCcEeeecc-----------------Cccee
Confidence 655311 12335668899999986 66554 2336888898 55666
Q ss_pred eecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCcccccc
Q 003886 365 VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 444 (789)
Q Consensus 365 ~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~ 444 (789)
..+..+...+...+|+|+|+.++.....+ ..|.+||+.+........... . ...
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d----------~~v~iwd~~~~~~~~~~~~~~--------~--------h~~ 297 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVD----------QTVKIWDLRQVRGKASFLYSL--------P--------HRH 297 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETT----------SBCCEEETTTCCSSSCCSBCC--------B--------CSS
T ss_pred EEEecccceEEeeeecCCCceEEEEecCc----------ceeeEEecccccccceEEEee--------e--------ccc
Confidence 67777777888999999998765554332 248889987654321110000 0 011
Q ss_pred CCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEE
Q 003886 445 SILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 481 (789)
Q Consensus 445 ~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~ 481 (789)
.+..+.|+|||+.| +++..++...|| |+.+++..
T Consensus 298 ~v~~~~~spdg~~l-~s~~~D~~i~iw--d~~~~~~~ 331 (435)
T 4e54_B 298 PVNAACFSPDGARL-LTTDQKSEIRVY--SASQWDCP 331 (435)
T ss_dssp CEEECCBCTTSSEE-EEEESSSCEEEE--ESSSSSSE
T ss_pred cccceeECCCCCee-EEEcCCCEEEEE--ECCCCccc
Confidence 34467899999966 555556655555 66666543
No 383
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=98.87 E-value=2.3e-09 Score=111.76 Aligned_cols=110 Identities=15% Similarity=0.088 Sum_probs=71.7
Q ss_pred CCCCccEEEEEcCccHHHHHHHHHhCCCcee-EEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHH
Q 003886 667 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFV-AAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTR 745 (789)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~-a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (789)
.+|++||+|+|+|+||++++.++..+|++|+ ++++.++...... .+... ...+.. .+...+..+....
T Consensus 7 ~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~----~~~~~---~~~~~~----~~~~~~~~~~~~~ 75 (318)
T 2d81_A 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCA----RNQYY---TSCMYN----GYPSITTPTANMK 75 (318)
T ss_dssp CEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTT----SSSCG---GGGSTT----CCCCCHHHHHHHH
T ss_pred CcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEeccccccc----chHHH---HHHhhc----cCCCCCCHHHHHH
Confidence 4899999999999999999999999999999 8877776431110 00000 000000 0000011122222
Q ss_pred HHhcCccccCCCCC-CCEEEEEeCCCCCCChHHHHHHHHHCCC
Q 003886 746 FHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQVIYHIPF 787 (789)
Q Consensus 746 ~~~~sp~~~~~~i~-~P~Lii~G~~D~~vp~~~~~~l~~~l~~ 787 (789)
..+.+++..+.+++ .|+||+||++|.+||++++.+++++|+.
T Consensus 76 ~~~~~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~ 118 (318)
T 2d81_A 76 SWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGN 118 (318)
T ss_dssp HHBTTTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTT
T ss_pred HhhcccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHh
Confidence 22225666666654 5899999999999999999999998874
No 384
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.1e-07 Score=112.60 Aligned_cols=246 Identities=11% Similarity=0.074 Sum_probs=143.9
Q ss_pred EEEecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCCC--CCeEEEEecCC
Q 003886 99 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPE 175 (789)
Q Consensus 99 ~~~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~ 175 (789)
...-.++|||+.++... ..+.+.++++....... ..+.... +.+...+|||+ |+.|+..+..+
T Consensus 12 V~~l~~s~dg~~latg~---------~dg~I~vwd~~~~~~~~~~~l~~h~-----~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCS---------SDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp EEEECCCSSSCCEEEEE---------TTTEEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCTTSCSEEEEEETTS
T ss_pred eEEEEECCCCCeEEEEE---------CCCcEEEEecCCCCCccceeccCCc-----CceEEEEecCCCCCCEEEEEeCCC
Confidence 33445689999876542 23355566653222111 2222222 45889999999 99998877653
Q ss_pred CCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCC--CCEEEEEeecCCCCCCCccCCCCCCCCCCcCCC
Q 003886 176 NESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 251 (789)
Q Consensus 176 ~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (789)
.+.+| ..++...+.... ...+.| ..+.|+|+ |+.|+..+.+
T Consensus 78 -----~I~vwd~~~~~~~~~~~~~-~h~~~V------~~v~~sp~~~~~~l~sgs~d----------------------- 122 (753)
T 3jro_A 78 -----KVLIWKEENGRWSQIAVHA-VHSASV------NSVQWAPHEYGPLLLVASSD----------------------- 122 (753)
T ss_dssp -----CEEEEEEETTEEEEEEEEC-CCSSCE------EEEEECCGGGCSEEEEEETT-----------------------
T ss_pred -----eEEEEECCCCccccccccc-CCCCCe------EEEEECCCCCCCEEEEEeCC-----------------------
Confidence 34555 334322322221 222223 78999999 8888876432
Q ss_pred CCCCcceeeCCcccccCCccCceEEEEEccCCce---EeccCCCCCCccceEEEee-------------CCCCCccEEEE
Q 003886 252 SWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVF 315 (789)
Q Consensus 252 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~---~~l~~~~~~~~~~~~~wSP-------------Dg~~~~~~l~f 315 (789)
..|.+||+.++.. ..+ ......+..+.|+| |++. |+.
T Consensus 123 ---------------------g~I~vwdl~~~~~~~~~~~--~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~----l~s 175 (753)
T 3jro_A 123 ---------------------GKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVT 175 (753)
T ss_dssp ---------------------SEEEEEECCSSSCCCCEEE--ECCSSCEEEEEECCCC---------CGGGCC----EEE
T ss_pred ---------------------CcEEEEEeecCCCcceeEe--ecCCCceEEEEecCcccccccccccCCCCCE----EEE
Confidence 5788999877632 222 22344677899999 5776 666
Q ss_pred EeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCC-CCeeecCCCCCccCcceecCC---CCEEEEEec
Q 003886 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFPRFSPD---GKFLVFLSA 391 (789)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt~~~~~~~~p~~SpD---G~~la~~s~ 391 (789)
.+. +..|+++|+.... .. .....+..+...+...+|+|| |+.|+..+.
T Consensus 176 gs~---------------dg~I~iwd~~~~~-------------~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 176 GGA---------------DNLVKIWKYNSDA-------------QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EET---------------TSCEEEEEEETTT-------------TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred EEC---------------CCeEEEEeccCCc-------------ccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 652 2357777762100 00 123455666778899999999 888877665
Q ss_pred CCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003886 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (789)
Q Consensus 392 ~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (789)
+. .|.+||+.++......... . . .. ....+..+.|+|||+.| +++..++...+|
T Consensus 228 Dg-----------~I~iwd~~~~~~~~~~~~~----~---~---~~----~~~~v~~l~~spdg~~l-~s~s~Dg~I~vw 281 (753)
T 3jro_A 228 DR-----------TCIIWTQDNEQGPWKKTLL----K---E---EK----FPDVLWRASWSLSGNVL-ALSGGDNKVTLW 281 (753)
T ss_dssp SS-----------CEEEEEESSSSSCCBCCBS----S---S---SC----CSSCCCCEEECTTTCCE-EEECSSSCEECC
T ss_pred CC-----------EEEEecCCCCCCcceeEEe----c---c---CC----CCCceEEEEEcCCCCEE-EEEcCCCEEEEE
Confidence 43 5889998775432110000 0 0 00 11245678999999855 555556665565
Q ss_pred EEE
Q 003886 472 SVN 474 (789)
Q Consensus 472 ~~d 474 (789)
.++
T Consensus 282 d~~ 284 (753)
T 3jro_A 282 KEN 284 (753)
T ss_dssp BCC
T ss_pred ecC
Confidence 444
No 385
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.4e-07 Score=113.86 Aligned_cols=214 Identities=9% Similarity=0.110 Sum_probs=125.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
..+...+|||||+.||.....+ .+.+|+........... ..+.| ..++|+| |++|+..+.+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg-----~I~lw~~~~~~~~~~~~--~~~~V------~~l~fsp-g~~L~S~s~D----- 78 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTG-----EVHIYGQQQVEVVIKLE--DRSAI------KEMRFVK-GIYLVVINAK----- 78 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTS-----EEEEECSTTCEEEEECS--SCCCE------EEEEEET-TTEEEEEETT-----
T ss_pred CCcEEEEECCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEcC--CCCCE------EEEEEcC-CCEEEEEECc-----
Confidence 4588999999999999877654 56777433223222222 12233 7999999 8877765432
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (789)
..|.+||+.+++.... ......+..++|+|||+. |
T Consensus 79 ---------------------------------------~~v~lWd~~~~~~~~~--~~~~~~V~~v~~sp~g~~----l 113 (902)
T 2oaj_A 79 ---------------------------------------DTVYVLSLYSQKVLTT--VFVPGKITSIDTDASLDW----M 113 (902)
T ss_dssp ---------------------------------------CEEEEEETTTCSEEEE--EECSSCEEEEECCTTCSE----E
T ss_pred ---------------------------------------CeEEEEECCCCcEEEE--EcCCCCEEEEEECCCCCE----E
Confidence 5799999998875433 223346788999999997 6
Q ss_pred EEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCe------------eecCCCCCccCcceecC
Q 003886 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV------------VNLTESISSAFFPRFSP 381 (789)
Q Consensus 314 ~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~------------~~Lt~~~~~~~~p~~Sp 381 (789)
+..+ .+..|.++|+ .++.. ..+..+.+.+...+|+|
T Consensus 114 ~sgs---------------~dg~V~lwd~-----------------~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 114 LIGL---------------QNGSMIVYDI-----------------DRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEEE---------------TTSCEEEEET-----------------TTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEEc---------------CCCcEEEEEC-----------------CCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 6554 2236788887 33322 12344556788999999
Q ss_pred CC-CEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCC---CccccccCCCCCccccCCCE
Q 003886 382 DG-KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC---FPGLYSSSILSNPWLSDGCT 457 (789)
Q Consensus 382 DG-~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~---f~g~~~~~~~~~~ws~Dg~~ 457 (789)
++ ..|+..+ .+ ..+ +||+.++......... ..+ ..+.... ........+..+.|+|||+.
T Consensus 162 ~~~~~l~~g~-~d----------g~v-lWd~~~~~~~~~~~~~--~~~--g~~~~~~~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 162 RDIGTVLISY-EY----------VTL-TYSLVENEIKQSFIYE--LPP--FAPGGDFSEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp TEEEEEEEEC-SS----------CEE-EEETTTTEEEEEECCC--BCT--TCCCSTTCCCTTSCBCCCEEEEEECTTSSE
T ss_pred CCCCEEEEEe-CC----------CcE-EEECCCCceEEEEecc--cCC--cCCCcccccccccccCCCeEEEEEcCCCCE
Confidence 75 4554433 22 257 9998775432100000 000 0000000 00000113457789999985
Q ss_pred EEEEEEeCCeEEEEEEECCCCcEEE
Q 003886 458 MLLSSIWGSSQVIISVNVSSGELLR 482 (789)
Q Consensus 458 l~~~~~~~~~~~l~~~dl~tg~~~~ 482 (789)
| +++..++...| +|+.+|+...
T Consensus 226 l-asgs~Dg~i~l--Wd~~~g~~~~ 247 (902)
T 2oaj_A 226 I-ITIHEDNSLVF--WDANSGHMIM 247 (902)
T ss_dssp E-EEEETTCCEEE--EETTTCCEEE
T ss_pred E-EEEECCCeEEE--EECCCCcEEE
Confidence 5 55555665555 4777887654
No 386
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.87 E-value=1.7e-07 Score=101.58 Aligned_cols=224 Identities=13% Similarity=0.082 Sum_probs=126.7
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecC----------CCccccccCCCcccceeecC-CC
Q 003886 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVP----------QTVHGSVYADGWFEGISWNS-DE 219 (789)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~----------~~~~g~v~~d~~~~~~~wSp-Dg 219 (789)
+.+...+||| +|++|+.....+ .+.+| ..++........ ....+. ...+.|+| ++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~ 112 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDG-----VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS------VETVQWYPHDT 112 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTS-----CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC------EEEEEECTTCT
T ss_pred CcEEEEEEecCCCCEEEEEcCCC-----eEEEEECCCCcccceEeccccccccccccccCCCc------EEEEEEccCCC
Confidence 4588999999 999999876543 34555 222222111100 112222 37899999 66
Q ss_pred CEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccce
Q 003886 220 TLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQ 299 (789)
Q Consensus 220 ~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~ 299 (789)
+.|+..+. +..|.+||+.+++.... ......+..
T Consensus 113 ~~l~s~~~--------------------------------------------d~~i~iwd~~~~~~~~~--~~~~~~~~~ 146 (408)
T 4a11_B 113 GMFTSSSF--------------------------------------------DKTLKVWDTNTLQTADV--FNFEETVYS 146 (408)
T ss_dssp TCEEEEET--------------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEE
T ss_pred cEEEEEeC--------------------------------------------CCeEEEeeCCCCcccee--ccCCCceee
Confidence 66665432 25799999999887665 334445678
Q ss_pred EEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCccee
Q 003886 300 VVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 379 (789)
Q Consensus 300 ~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~ 379 (789)
+.|+|++.. ...++..+ ....|+++|+. .......+..+...+...+|
T Consensus 147 ~~~~~~~~~-~~~~~~~~---------------~~~~v~~~d~~----------------~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 147 HHMSPVSTK-HCLVAVGT---------------RGPKVQLCDLK----------------SGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp EEECSSCSS-CCEEEEEE---------------SSSSEEEEESS----------------SSCCCEEECCCCSCEEEEEE
T ss_pred eEeecCCCC-CcEEEEEc---------------CCCeEEEEeCC----------------CcceeeeecCCCCcEEEEEE
Confidence 889886541 00144443 23468888882 33345667667777889999
Q ss_pred cCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEE
Q 003886 380 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 459 (789)
Q Consensus 380 SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~ 459 (789)
+|+|+++++....+ ..|.+||+.++................ . ....+.+ ....+..+.|+|||+.|+
T Consensus 195 ~~~~~~ll~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~v~~~~~~~~~~~l~ 261 (408)
T 4a11_B 195 SPRYDYILATASAD----------SRVKLWDVRRASGCLITLDQHNGKKSQ-A-VESANTA-HNGKVNGLCFTSDGLHLL 261 (408)
T ss_dssp CSSCTTEEEEEETT----------SCEEEEETTCSSCCSEECCTTTTCSCC-C-TTTSSCS-CSSCEEEEEECTTSSEEE
T ss_pred CCCCCcEEEEEcCC----------CcEEEEECCCCCcccccccccccccce-e-ecccccc-ccCceeEEEEcCCCCEEE
Confidence 99999754444332 258999987654211100000000000 0 0000000 112345678999999665
Q ss_pred EEEEeCCeEEEEEEECCCCcEEE
Q 003886 460 LSSIWGSSQVIISVNVSSGELLR 482 (789)
Q Consensus 460 ~~~~~~~~~~l~~~dl~tg~~~~ 482 (789)
++..++. |..+|+.+++...
T Consensus 262 -~~~~dg~--i~vwd~~~~~~~~ 281 (408)
T 4a11_B 262 -TVGTDNR--MRLWNSSNGENTL 281 (408)
T ss_dssp -EEETTSC--EEEEETTTCCBCC
T ss_pred -EecCCCe--EEEEECCCCccce
Confidence 4444444 5556777776543
No 387
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.86 E-value=5.8e-07 Score=95.01 Aligned_cols=201 Identities=11% Similarity=0.048 Sum_probs=115.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCC-ccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQT-VHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~-~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
..+....|||+ .||..+... .+.+|+ .+.......+... ..+.| ..++|||||+.||..+.+
T Consensus 15 ~~v~~~~~s~~--~las~~~D~-----~i~lw~~~~~~~~~~~~~~~~~h~~~v------~~v~~sp~~~~las~s~D-- 79 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGSTDR-----KIKLVSVKYDDFTLIDVLDETAHKKAI------RSVAWRPHTSLLAAGSFD-- 79 (330)
T ss_dssp SCEEEEEEETT--EEEEEESSS-----CEEEEECSSSCCEEEEEECTTCCCSCE------EEEEECTTSSEEEEEETT--
T ss_pred CceeeeccCCC--EEEEEcCCC-----EEEEEEecCCCeEEEEEEecCCccCCE------EEEEECCCCCEEEEEeCC--
Confidence 35778899998 666655443 355662 2222222222122 22334 789999999998876544
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCC-------ce-EeccCCCCCCccceEEE
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-------EV-QAVKGIPKSLSVGQVVW 302 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g-------~~-~~l~~~~~~~~~~~~~w 302 (789)
..|.+||+..+ +. ..+ ......+..++|
T Consensus 80 ------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~ 115 (330)
T 2hes_X 80 ------------------------------------------STVSIWAKEESADRTFEMDLLAII--EGHENEVKGVAW 115 (330)
T ss_dssp ------------------------------------------SCEEEEEC-------CCCEEEEEE--C----CEEEEEE
T ss_pred ------------------------------------------CcEEEEEcccCcCccccceeEEEE--cCCCCcEEEEEE
Confidence 34666766432 11 223 122345778999
Q ss_pred eeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCC-CCeeecCCCCCccCcceecC
Q 003886 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFPRFSP 381 (789)
Q Consensus 303 SPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt~~~~~~~~p~~Sp 381 (789)
+|||+. |+..+. +..|.++|+... ... .....+..+...+...+|+|
T Consensus 116 sp~g~~----las~s~---------------D~~v~iwd~~~~-------------~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 116 SNDGYY----LATCSR---------------DKSVWIWETDES-------------GEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp CTTSCE----EEEEET---------------TSCEEEEECCTT-------------CCCCEEEEEECCCSSCEEEEEECS
T ss_pred CCCCCE----EEEEeC---------------CCEEEEEeccCC-------------CCCeEEEEEeccCCCceEEEEECC
Confidence 999997 776652 235777776200 001 12345666777788999999
Q ss_pred CCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC--CCEEE
Q 003886 382 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD--GCTML 459 (789)
Q Consensus 382 DG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D--g~~l~ 459 (789)
||+.|+..+.+. .|.+||..++... .+..... ....+..+.|+|+ +. ++
T Consensus 164 ~~~~l~s~s~D~-----------~i~iW~~~~~~~~--------~~~~~~~---------h~~~v~~~~~~~~~~~~-~l 214 (330)
T 2hes_X 164 SEALLASSSYDD-----------TVRIWKDYDDDWE--------CVAVLNG---------HEGTVWSSDFDKTEGVF-RL 214 (330)
T ss_dssp SSSEEEEEETTS-----------CEEEEEEETTEEE--------EEEEECC---------CSSCEEEEEECCSSSSC-EE
T ss_pred CCCEEEEEcCCC-----------eEEEEECCCCCee--------EEEEccC---------CCCcEEEEEecCCCCee-EE
Confidence 999988777553 4788886543211 0111100 0012345678888 44 45
Q ss_pred EEEEeCCeEEEEEEE
Q 003886 460 LSSIWGSSQVIISVN 474 (789)
Q Consensus 460 ~~~~~~~~~~l~~~d 474 (789)
+++..++...||.+.
T Consensus 215 ~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 215 CSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEEETTSCEEEEEEE
T ss_pred EEEeCCCeEEEEEec
Confidence 677777888888765
No 388
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=98.86 E-value=1.3e-08 Score=105.48 Aligned_cols=197 Identities=13% Similarity=0.149 Sum_probs=107.6
Q ss_pred CCeeEEEEEEecCCCC-----CCCCCcEEEEEcCCCCCCCchhhHH---HHHHHHHCCcEEEEEcCC--CC--CC-----
Q 003886 572 AQKPFEAIFVSSSHKK-----DCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYR--GS--LG----- 634 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~-----~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~Gy~V~~~d~r--Gs--~G----- 634 (789)
-|.++...+|+|+++. +++++|+|.++||.++. ...|.. ..+.+++.|.++++++-. +. ++
T Consensus 24 l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~--~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~ 101 (299)
T 4fol_A 24 TKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCT--PDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGS 101 (299)
T ss_dssp TSSEEEEEEEECGGGGCC------CBCEEEEECCTTCC--HHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCC
T ss_pred cCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCC--hHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccc
Confidence 4567888899998764 35789999999997653 445543 234566789999999852 11 00
Q ss_pred ----CCchhhccCC-------CCCCcccHHHHHHHHHHHHH----cCCCCCccEEEEEcCccHHHHHHHHHhC--CCcee
Q 003886 635 ----FGEEALQSLP-------GKVGSQDVNDVLTAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFV 697 (789)
Q Consensus 635 ----~G~~~~~~~~-------~~~~~~~~~D~~~~i~~l~~----~~~~d~~rv~l~G~S~GG~~a~~~~~~~--p~~~~ 697 (789)
.+..+..... .++...-.+|+...|+.-.. +...+.++.+|.|+||||+-|+.++.++ |++|.
T Consensus 102 ~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~ 181 (299)
T 4fol_A 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYK 181 (299)
T ss_dssp SSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCS
T ss_pred cccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceE
Confidence 0111100000 00111112344444432221 1123467899999999999999999985 67899
Q ss_pred EEEEeCCccchhhhhcCCCCCcchhhhhccCccccccCCCCChhhHHHHHhcCcccc---CCCC-CCCEEEEEeCCCCCC
Q 003886 698 AAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH---ISKV-KTPTIFLLGAQDLRV 773 (789)
Q Consensus 698 a~v~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~---~~~i-~~P~Lii~G~~D~~v 773 (789)
++.+.+|.++.... .|..... ..+.+ .....+...++... ..+. ..+++|-+|++|...
T Consensus 182 ~~~s~s~~~~p~~~-------~~~~~~~------~~~~g----~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~ 244 (299)
T 4fol_A 182 SCSAFAPIVNPSNV-------PWGQKAF------KGYLG----EEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFL 244 (299)
T ss_dssp EEEEESCCCCGGGS-------HHHHHHH------HHHTC---------CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTH
T ss_pred EEEecccccCcccc-------ccccccc------ccccc----cchhhhhhcCHHHHHHhcccCCCCceEEEecCCCcch
Confidence 99999998875322 1111100 00111 11122333333332 2233 357999999999865
Q ss_pred ChH-HHHHHHHHCCC
Q 003886 774 PVS-NGLQVIYHIPF 787 (789)
Q Consensus 774 p~~-~~~~l~~~l~~ 787 (789)
..+ ....|.++++.
T Consensus 245 ~~~l~~~~f~~a~~~ 259 (299)
T 4fol_A 245 EEHLKPELLLEAVKA 259 (299)
T ss_dssp HHHTCTHHHHHHHTT
T ss_pred hhhcCHHHHHHHHHh
Confidence 322 12456666543
No 389
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.85 E-value=5.6e-09 Score=109.54 Aligned_cols=105 Identities=19% Similarity=0.279 Sum_probs=80.2
Q ss_pred CCCcEEEEEcCCCCCCCc----hhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHc
Q 003886 590 SCDPLIVVLHGGPHSVSL----SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 665 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~----~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 665 (789)
+..|.||++||..+.... ..|....+.|+++||.|+++|++| +|.+... ....+++.+.++.+++.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g---~g~s~~~-------~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSG---FQSDDGP-------NGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCS---SCCSSST-------TSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCC---CCCCCCC-------CCCHHHHHHHHHHHHHH
Confidence 456789999997765311 456677889999999999999987 4433210 22356666666666665
Q ss_pred CCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 666 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 666 ~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
.+.+++.|+|||+||.++..++.++|++++++|+.++..
T Consensus 76 --~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 76 --TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 346789999999999999999999999999999998853
No 390
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.85 E-value=5.4e-08 Score=101.39 Aligned_cols=262 Identities=8% Similarity=-0.004 Sum_probs=139.5
Q ss_pred ceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccc
Q 003886 125 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSV 204 (789)
Q Consensus 125 ~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v 204 (789)
..+.+.++++... .....+.... ..+...+|||+|+.|+.....+ .-.+|.++.......+... ....+.+
T Consensus 37 ~dg~v~vw~~~~~-~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg--~i~~~~~~~~~~~~~~~~~-~~~~~~i 107 (313)
T 3odt_A 37 RDGTVRLWSKDDQ-WLGTVVYTGQ-----GFLNSVCYDSEKELLLFGGKDT--MINGVPLFATSGEDPLYTL-IGHQGNV 107 (313)
T ss_dssp TTSEEEEEEESSS-EEEEEEEECS-----SCEEEEEEETTTTEEEEEETTS--CEEEEETTCCTTSCC-CEE-CCCSSCE
T ss_pred cCCcEEEEECCCC-EEEEEeecCC-----ccEEEEEECCCCCEEEEecCCC--eEEEEEeeecCCCCcccch-hhcccCE
Confidence 4456777776322 1122222222 4588899999999999876643 2223333322111111111 1111222
Q ss_pred cCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeC-CcccccCCccCceEEEEEccCC
Q 003886 205 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE-DWGETYAGKRQPSLFVININSG 283 (789)
Q Consensus 205 ~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~g~~~~~~~~~~l~v~d~~~g 283 (789)
..+.| +++.|+..+.+.... .|+ ..........+........|.+ +....+++..+..|.+||.. .
T Consensus 108 ------~~~~~--~~~~l~~~~~d~~i~--~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~ 174 (313)
T 3odt_A 108 ------CSLSF--QDGVVISGSWDKTAK--VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND-K 174 (313)
T ss_dssp ------EEEEE--ETTEEEEEETTSEEE--EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-E
T ss_pred ------EEEEe--cCCEEEEEeCCCCEE--EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC-c
Confidence 56777 677777766554321 222 0000111111222222334444 43444455567889999932 2
Q ss_pred ceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC
Q 003886 284 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 363 (789)
Q Consensus 284 ~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 363 (789)
....+. ......+..+.|+|+++ ++..+ ....|+++|+. ....
T Consensus 175 ~~~~~~-~~~~~~i~~~~~~~~~~-----~~~~~---------------~dg~i~i~d~~----------------~~~~ 217 (313)
T 3odt_A 175 VIKTFS-GIHNDVVRHLAVVDDGH-----FISCS---------------NDGLIKLVDMH----------------TGDV 217 (313)
T ss_dssp EEEEEC-SSCSSCEEEEEEEETTE-----EEEEE---------------TTSEEEEEETT----------------TCCE
T ss_pred eEEEEe-ccCcccEEEEEEcCCCe-----EEEcc---------------CCCeEEEEECC----------------chhh
Confidence 233332 22455678899999986 44444 23368888882 2334
Q ss_pred eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccc
Q 003886 364 VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 443 (789)
Q Consensus 364 ~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~ 443 (789)
...+..+...+...+|+|||+ |+..+.+ ..|++||+.++...... ... .
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~~-l~~~~~d-----------g~v~iwd~~~~~~~~~~----------~~~---------~ 266 (313)
T 3odt_A 218 LRTYEGHESFVYCIKLLPNGD-IVSCGED-----------RTVRIWSKENGSLKQVI----------TLP---------A 266 (313)
T ss_dssp EEEEECCSSCEEEEEECTTSC-EEEEETT-----------SEEEEECTTTCCEEEEE----------ECS---------S
T ss_pred hhhhhcCCceEEEEEEecCCC-EEEEecC-----------CEEEEEECCCCceeEEE----------ecc---------C
Confidence 456666677788999999994 6655533 36999998775432111 000 0
Q ss_pred cCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcE
Q 003886 444 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL 480 (789)
Q Consensus 444 ~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~ 480 (789)
..+..+.|+|||+ + +++..++...+| |+.+++.
T Consensus 267 ~~i~~~~~~~~~~-~-~~~~~dg~i~iw--~~~~~~~ 299 (313)
T 3odt_A 267 ISIWSVDCMSNGD-I-IVGSSDNLVRIF--SQEKSRW 299 (313)
T ss_dssp SCEEEEEECTTSC-E-EEEETTSCEEEE--ESCGGGC
T ss_pred ceEEEEEEccCCC-E-EEEeCCCcEEEE--eCCCCce
Confidence 1244678999998 4 345555655555 5555543
No 391
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.84 E-value=7e-07 Score=93.13 Aligned_cols=243 Identities=14% Similarity=0.072 Sum_probs=146.5
Q ss_pred EEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCC
Q 003886 157 SAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (789)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~ 234 (789)
...+|||++ .||...+. -..+| .+++..+.+.... ..+.| ..+.|+|||+.||..+.+
T Consensus 29 ~~l~WS~~~-~lAvg~D~------tV~iWd~~tg~~~~~~~~~~-~~~~V------~~v~~~~~~~~l~sgs~D------ 88 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQMEQ-PGEYI------SSVAWIKEGNYLAVGTSS------ 88 (318)
T ss_dssp BCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECCS-TTCCE------EEEEECTTSSEEEEEETT------
T ss_pred eEEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEecC-CCCeE------EEEEECCCCCEEEEEECC------
Confidence 457899987 67765432 36677 4566666665422 11223 789999999999876443
Q ss_pred CccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003886 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (789)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~ 314 (789)
..|.+||+.+++.... ...+ ......++++++. ++
T Consensus 89 --------------------------------------g~v~iw~~~~~~~~~~--~~~h-~~~~~~~~~~~~~----l~ 123 (318)
T 4ggc_A 89 --------------------------------------AEVQLWDVQQQKRLRN--MTSH-SARVGSLSWNSYI----LS 123 (318)
T ss_dssp --------------------------------------SEEEEEETTTTEEEEE--EECC-SSCEEEEEEETTE----EE
T ss_pred --------------------------------------CcEEEeecCCceeEEE--ecCc-cceEEEeecCCCE----EE
Confidence 5788999999876544 1221 2234467788775 55
Q ss_pred EEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCC
Q 003886 315 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSS 394 (789)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~ 394 (789)
..+. ...+...+... .......+..+........|+++|+.|+..+.+.
T Consensus 124 s~~~---------------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~- 172 (318)
T 4ggc_A 124 SGSR---------------SGHIHHHDVRV---------------AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN- 172 (318)
T ss_dssp EEET---------------TSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred EEec---------------CCceEeeecCC---------------CceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-
Confidence 4431 22344555410 2223445556666778889999999988766543
Q ss_pred CCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003886 395 VDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (789)
Q Consensus 395 ~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~d 474 (789)
.+.+||+.+++.......... . ....+....|++++..++..........+..+|
T Consensus 173 ----------~i~iwd~~~~~~~~~~~~~~~-----------~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd 227 (318)
T 4ggc_A 173 ----------LVNVWPSAPGEGGWVPLQTFT-----------Q----HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWN 227 (318)
T ss_dssp ----------CEEEEESSCBTTBSCCSEEEC-----------C----CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEE
T ss_pred ----------ceeEEECCCCcccccceeeec-----------c----cCCceEEEEecCCCCcEEEEEecCCCCEEEEEe
Confidence 488999877554221111000 0 001233456788877777666655555566678
Q ss_pred CCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 475 VSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 475 l~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
..++................++++++.++....+.+ ..|++.+..+
T Consensus 228 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d--~~i~iwd~~~ 273 (318)
T 4ggc_A 228 VCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ--NQLVIWKYPT 273 (318)
T ss_dssp TTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT--CCEEEEETTT
T ss_pred cccccccccccceeeeeeeeecccccceEEEEEcCC--CEEEEEECCC
Confidence 877777666555555566678888888776654322 2366666543
No 392
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.84 E-value=1.7e-06 Score=98.00 Aligned_cols=284 Identities=8% Similarity=-0.007 Sum_probs=153.8
Q ss_pred CCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003886 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (789)
Q Consensus 104 ~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (789)
++.|....+|+... ....+++++.. ..+. ..+..+ .....+++||||++|+..... + .+.
T Consensus 161 ~~~d~~~~~~V~~~-------~~~~V~viD~~--t~~v~~~i~~g------~~p~~v~~SpDGr~lyv~~~d--g--~V~ 221 (567)
T 1qks_A 161 NDWDLENLFSVTLR-------DAGQIALIDGS--TYEIKTVLDTG------YAVHISRLSASGRYLFVIGRD--G--KVN 221 (567)
T ss_dssp SCCCGGGEEEEEET-------TTTEEEEEETT--TCCEEEEEECS------SCEEEEEECTTSCEEEEEETT--S--EEE
T ss_pred cccCCCceEEEEeC-------CCCeEEEEECC--CCeEEEEEeCC------CCccceEECCCCCEEEEEcCC--C--eEE
Confidence 34565556666543 23477777652 2222 222222 134578999999998765432 2 466
Q ss_pred EEec---CCceeEEEecCCCccccccCCCcccceeec----CCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCC
Q 003886 183 ELWS---QSQLEKEFHVPQTVHGSVYADGWFEGISWN----SDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (789)
Q Consensus 183 ~i~~---~~~~~~~~~~~~~~~g~v~~d~~~~~~~wS----pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (789)
.++. .++....+...... ..+.+| |||++++...+.
T Consensus 222 viD~~~~t~~~v~~i~~G~~P----------~~ia~s~~~~pDGk~l~v~n~~--------------------------- 264 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGSEA----------RSIETSKMEGWEDKYAIAGAYW--------------------------- 264 (567)
T ss_dssp EEETTSSSCCEEEEEECCSEE----------EEEEECCSTTCTTTEEEEEEEE---------------------------
T ss_pred EEECCCCCCcEeEEEecCCCC----------ceeEEccccCCCCCEEEEEEcc---------------------------
Confidence 6663 44444444433233 578999 799988776543
Q ss_pred cceeeCCcccccCCccCceEEEEEccCCceEeccCCCC----------CCccceEEEeeCCCCCccEEEEEeecCCceee
Q 003886 256 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK----------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 325 (789)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~----------~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~ 325 (789)
.+.+.++|..+.++.....+.+ ...+..+..|+++.. +++.. .
T Consensus 265 ----------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~----~vv~~-~------ 317 (567)
T 1qks_A 265 ----------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE----FIVNV-K------ 317 (567)
T ss_dssp ----------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE----EEEEE-T------
T ss_pred ----------------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCE----EEEEe-c------
Confidence 2678888988887654311111 113446677888765 44433 1
Q ss_pred eeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC---eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccc
Q 003886 326 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSA 402 (789)
Q Consensus 326 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~ 402 (789)
....|+.+|. .... ...+.. ........|+|||++++...+.
T Consensus 318 -------~~g~v~~vd~-----------------~~~~~~~v~~i~~-~~~~~d~~~~pdgr~~~va~~~---------- 362 (567)
T 1qks_A 318 -------ETGKILLVDY-----------------TDLNNLKTTEISA-ERFLHDGGLDGSHRYFITAANA---------- 362 (567)
T ss_dssp -------TTTEEEEEET-----------------TCSSEEEEEEEEC-CSSEEEEEECTTSCEEEEEEGG----------
T ss_pred -------CCCeEEEEec-----------------CCCccceeeeeec-cccccCceECCCCCEEEEEeCC----------
Confidence 2237888887 2221 122211 1123345799999987666543
Q ss_pred cceeEEeecCCCCCCCcccceeeEEee-eeccCCCCCccccccCCCCCc-cccCCCEEEEEEEeCCeEEEEEEECCC---
Q 003886 403 TDSLHRIDWPTNGNFSSLEKIVDVIPV-VQCAEGDCFPGLYSSSILSNP-WLSDGCTMLLSSIWGSSQVIISVNVSS--- 477 (789)
Q Consensus 403 ~~~L~~~d~~~~~~~~~t~~~~~v~~~-~~~~~~~~f~g~~~~~~~~~~-ws~Dg~~l~~~~~~~~~~~l~~~dl~t--- 477 (789)
.+.|.++|..+++.. ..+++ -..+. || .... +.|++..++++... +...|..+|.++
T Consensus 363 sn~V~ViD~~t~kl~-------~~i~vgg~~Ph----pg------~g~~~~~p~~g~v~~t~~~-g~~~Vsvid~~~~~~ 424 (567)
T 1qks_A 363 RNKLVVIDTKEGKLV-------AIEDTGGQTPH----PG------RGANFVHPTFGPVWATSHM-GDDSVALIGTDPEGH 424 (567)
T ss_dssp GTEEEEEETTTTEEE-------EEEECSSSSBC----CT------TCEEEEETTTEEEEEEEBS-SSSEEEEEECCTTTC
T ss_pred CCeEEEEECCCCcEE-------EEEeccCcCCC----Cc------cceeeECCCCCcEEEeCCC-CCCeEEEecCCCCCC
Confidence 357999999875431 11222 11111 11 1222 47887777665443 334577778766
Q ss_pred ----CcE-EEecCCCCCceeEEeeecCCEEEEEEe-CCC--CCCeEEEEeeccc
Q 003886 478 ----GEL-LRITPAESNFSWSLLTLDGDNIIAVSS-SPV--DVPQVKYGYFVDK 523 (789)
Q Consensus 478 ----g~~-~~lt~~~~~~~~~~~s~dg~~l~~~~s-s~~--~p~~i~~~~~~~~ 523 (789)
-++ +.+............++++++++.... +++ .-..|.++|..+.
T Consensus 425 ~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 425 PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred ccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 233 444332221123467888888775442 222 0235788887644
No 393
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.83 E-value=1.9e-09 Score=122.41 Aligned_cols=130 Identities=22% Similarity=0.240 Sum_probs=87.7
Q ss_pred cCCCeeEEEEEEecCCCC---CCCCCcEEEEEcCCCCCCCchhhHHHHHHHHHC-CcEEEEEcCCC-CCCCCchhhccCC
Q 003886 570 KGAQKPFEAIFVSSSHKK---DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-GYSLLIVNYRG-SLGFGEEALQSLP 644 (789)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~---~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~-Gy~V~~~d~rG-s~G~G~~~~~~~~ 644 (789)
+.|.+.+ .++.|.... ..++.|+||++|||+........ .....|+++ |++|+.+|||- .-||.......
T Consensus 108 sEdcL~l--~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~-~~~~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~-- 182 (574)
T 3bix_A 108 SEDCLYL--NIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNL-YDGSVLASYGNVIVITVNYRLGVLGFLSTGDQA-- 182 (574)
T ss_dssp CSCCCEE--EEEEEC--------CCEEEEEECCCSSSSSCCGGG-SCCHHHHHHHTCEEEEECCCCHHHHHCCCSSSS--
T ss_pred CCcCCEE--EEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCc-cCchhhhccCCEEEEEeCCcCcccccCcCCCCC--
Confidence 3455555 477786431 24578999999998875443321 112456654 69999999993 22333221111
Q ss_pred CCCCcccHHHHHHHHHHHHHcC---CCCCccEEEEEcCccHHHHHHHHHhCC---CceeEEEEeCCc
Q 003886 645 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPL 705 (789)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~~~~~p---~~~~a~v~~~pv 705 (789)
..+...+.|+.++++|+.++. ..|+++|+|+|+|.||.++..++.... .+|+++|+.+|.
T Consensus 183 -~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 183 -AKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred -CCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 123345899999999999862 369999999999999999998887543 579999998864
No 394
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.83 E-value=2.3e-09 Score=117.92 Aligned_cols=113 Identities=9% Similarity=-0.009 Sum_probs=80.7
Q ss_pred CCCCcEEEEEcCCCCCCCchhhHH-HHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcC
Q 003886 589 CSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 666 (789)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 666 (789)
+...|+||++||++.+. ...|.. ....|.+ .||.|+++|+|| +|.+.......+. ..-.+|+.+.++++.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G---~G~S~~~~~~~~~-~~~~~dl~~li~~L~~~~ 141 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRR---GSRTEYTQASYNT-RVVGAEIAFLVQVLSTEM 141 (452)
T ss_dssp CTTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHH---HHSSCHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechh---cccCchhHhHhhH-HHHHHHHHHHHHHHHHhc
Confidence 34578999999987753 245655 4466665 499999999997 3332211000000 112467778888887653
Q ss_pred CCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 667 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
.++.+++.|+|||+||.++..++.++|++++++|+.+|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 4677899999999999999999999999999999998753
No 395
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.82 E-value=1.8e-08 Score=109.85 Aligned_cols=111 Identities=20% Similarity=0.224 Sum_probs=74.4
Q ss_pred CCCcEEEEEcCCCCCCCchhhH--HHHHHHH-HCCcEEEEEcCCCCCCCCchhhcc--C---CCCCC----cccHHHHHH
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYS--KSLAFLS-SVGYSLLIVNYRGSLGFGEEALQS--L---PGKVG----SQDVNDVLT 657 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~--~~~~~la-~~Gy~V~~~d~rGs~G~G~~~~~~--~---~~~~~----~~~~~D~~~ 657 (789)
...| ||++|||++.... .+. .....|+ ..|+.|+++|+|| ||++.... . ..+++ .+.++|+.+
T Consensus 37 ~g~P-i~l~~Ggeg~~~~-~~~~~g~~~~lA~~~~~~Vi~~DhRg---~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~ 111 (446)
T 3n2z_B 37 NGGS-ILFYTGNEGDIIW-FCNNTGFMWDVAEELKAMLVFAEHRY---YGESLPFGDNSFKDSRHLNFLTSEQALADFAE 111 (446)
T ss_dssp TTCE-EEEEECCSSCHHH-HHHHCHHHHHHHHHHTEEEEEECCTT---STTCCTTGGGGGSCTTTSTTCSHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCCcchh-hhhcccHHHHHHHHhCCcEEEEecCC---CCCCCCCCccccccchhhccCCHHHHHHHHHH
Confidence 3456 5566898775321 111 2334454 4689999999998 66653211 0 12222 223678888
Q ss_pred HHHHHHHc-CCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCc
Q 003886 658 AIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (789)
Q Consensus 658 ~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv 705 (789)
.++++..+ ......++.++||||||+++++++.++|+++.++|+.++.
T Consensus 112 ~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssap 160 (446)
T 3n2z_B 112 LIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160 (446)
T ss_dssp HHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred HHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccc
Confidence 88887764 1234468999999999999999999999999999987643
No 396
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.82 E-value=8.7e-08 Score=104.22 Aligned_cols=259 Identities=14% Similarity=0.061 Sum_probs=124.8
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeE--EEecCCCccccccCCCcccceeecC--------CCCEEEEE
Q 003886 158 AVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEK--EFHVPQTVHGSVYADGWFEGISWNS--------DETLIAYV 225 (789)
Q Consensus 158 ~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~--~~~~~~~~~g~v~~d~~~~~~~wSp--------Dg~~la~~ 225 (789)
...++|+++.||..+.+. ...+| ..++... ......++.+.| ..++|+| ||+.||..
T Consensus 94 ~~~~~~~~~~las~~~d~-----~v~lw~~~~~~~~~~~~~~~~~gH~~~v------~~v~~~p~~~~~~~~d~~~las~ 162 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDN-----TVRLIITKNETIITQHVLGGKSGHHNFV------NDIDIADVYSADNRLAEQVIASV 162 (393)
T ss_dssp ---CCEEEEEEEEEETTS-----CEEEEEEETTEEEEEEEECTTTSCSSCE------EEEEEEEEECTTCSEEEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCC-----cEEEEECCCCccceeeeecccCCCCCce------EEEEEccccccccCCCCCEEEEE
Confidence 345777888888776543 35556 2333322 222234444555 8999998 89989887
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCce-EeccCCCCCCccceEEEee
Q 003886 226 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAP 304 (789)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~-~~l~~~~~~~~~~~~~wSP 304 (789)
+.+ ..|.+||+.++.. ..+ ......+..++|+|
T Consensus 163 s~D--------------------------------------------~tv~~Wd~~~~~~~~~~--~~~~~~v~~v~~~p 196 (393)
T 4gq1_A 163 GDD--------------------------------------------CTLIIWRLTDEGPILAG--YPLSSPGISVQFRP 196 (393)
T ss_dssp ETT--------------------------------------------SEEEEEEEETTEEEEEE--EECSSCEEEEEEET
T ss_pred ECC--------------------------------------------CeEEEEECCCCceeeee--cCCCCCcEEEEECC
Confidence 654 5788999977653 333 23344667899999
Q ss_pred CCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCC---------CCCCeeecCCCCCccC
Q 003886 305 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS---------EDLPVVNLTESISSAF 375 (789)
Q Consensus 305 Dg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~---------~~~~~~~Lt~~~~~~~ 375 (789)
++.. ++.++.. +..|.++|+................. ..........+...+.
T Consensus 197 ~~~~----~l~~~~~--------------d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 197 SNPN----QLIVGER--------------NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp TEEE----EEEEEET--------------TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred CCCc----eEEecCC--------------CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 9876 5555522 22566667632110000000000000 0000011122333456
Q ss_pred cceec-CCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccce-eeEEeeeeccCCCCCccccccCCCCCccc-
Q 003886 376 FPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI-VDVIPVVQCAEGDCFPGLYSSSILSNPWL- 452 (789)
Q Consensus 376 ~p~~S-pDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~-~~v~~~~~~~~~~~f~g~~~~~~~~~~ws- 452 (789)
...|+ |||+.|+..+.+. .+.+||+.++......... ..+..+...+...... .. .......|.
T Consensus 259 ~v~~~~~dg~~l~s~s~d~-----------~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ 325 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSG-----------AWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS-LF-PSLLGACPHP 325 (393)
T ss_dssp EEEEETTTTCEEEEECTTS-----------EEEEEEC-------------------CCSCSEEEEC-SS-CCSSCCEECS
T ss_pred eeeeecCCCCEEEEEeCCC-----------CEEEEECccCCCCceEeeecCccccEEEcccccccc-cc-CcceeEEEcc
Confidence 66776 8999988766443 5888888765432111110 0000000000000000 00 011223343
Q ss_pred cCCCEEEEEEEeCCeEEEEEEECCCCcEEEe-cCCCCCceeEEeeecCCEEEEEE
Q 003886 453 SDGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 453 ~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~l-t~~~~~~~~~~~s~dg~~l~~~~ 506 (789)
+.++.++.++..++... .+|..+++.... ......+....|+|||+.|+...
T Consensus 326 ~~~~~~~~sgs~Dg~V~--lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQ--LINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp SCTTEEEEEETTTTEEE--EEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEECCCCEEE--EEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 34455555555555544 457777765443 33333455678999999887654
No 397
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.80 E-value=3.6e-07 Score=100.51 Aligned_cols=268 Identities=9% Similarity=-0.007 Sum_probs=137.6
Q ss_pred CCC-CCceEEEEEeechhhcccceeEEEEEEeecC--CCCc-ccee-ecCCcceecccEEEEeCCCCCeEEEEecCCCCC
Q 003886 104 GNG-NGTQAMFSISQPNLLANKRKKFMLSTVISKE--NENS-VTFQ-WAPFPVEMTGASAVVPSPSGSKLLVVRNPENES 178 (789)
Q Consensus 104 ~sp-dg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~-~~lt-~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~ 178 (789)
++| ||+.++... ..+.+.++++... +... ..++ ... ..+...+|+|+|+.|+.....+ .
T Consensus 71 ~s~~~~~~l~s~s---------~dg~v~vwd~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~s~dg--~ 134 (437)
T 3gre_A 71 VSPGETPYLITGS---------DQGVIKIWNLKEIIVGEVYSSSLTYDCS-----STVTQITMIPNFDAFAVSSKDG--Q 134 (437)
T ss_dssp EECSSSCEEEEEE---------TTSEEEEEEHHHHHTTCCCSCSEEEECS-----SCEEEEEECTTSSEEEEEETTS--E
T ss_pred ECCCCCCEEEEec---------CCceEEEeECcccccCcccceeeeccCC-----CCEEEEEEeCCCCEEEEEeCCC--E
Confidence 347 887765432 3446667766431 1111 1222 122 4588999999999998876653 2
Q ss_pred CeEEEEe--cCCceeEEEecCCCcccccc----CCCccccee--ecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCC
Q 003886 179 PIQFELW--SQSQLEKEFHVPQTVHGSVY----ADGWFEGIS--WNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 250 (789)
Q Consensus 179 ~~~~~i~--~~~~~~~~~~~~~~~~g~v~----~d~~~~~~~--wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (789)
-.+|.+. ..++..+..... .++...+ .++....+. |+||++.|+..+.
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------------- 190 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCE-CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN----------------------- 190 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEE-EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET-----------------------
T ss_pred EEEEEeccccCCceeeccccc-eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC-----------------------
Confidence 2233332 133333322211 1100000 001112333 6677877776533
Q ss_pred CCCCCcceeeCCcccccCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeee
Q 003886 251 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 329 (789)
Q Consensus 251 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~ 329 (789)
+..|.+||+.+++.... .+......+..++|+|||+. |+..+
T Consensus 191 ---------------------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~----l~s~~------------ 233 (437)
T 3gre_A 191 ---------------------LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV----LILGT------------ 233 (437)
T ss_dssp ---------------------TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE----EEEEE------------
T ss_pred ---------------------CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE----EEEEc------------
Confidence 36799999988876443 21113457789999999987 66555
Q ss_pred eccCCcceEEEecccccchhhhhhhhcCCCCCCCe-eecC-CCCCccC----cceecCCCCEEEEEecCCCCCCCCcccc
Q 003886 330 CYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT-ESISSAF----FPRFSPDGKFLVFLSAKSSVDSGAHSAT 403 (789)
Q Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt-~~~~~~~----~p~~SpDG~~la~~s~~~~~~~g~~~~~ 403 (789)
.+..|.++|+ ..++. ..+. .+...+. .|.|+|||+.|+..+.+
T Consensus 234 ---~dg~i~iwd~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d----------- 282 (437)
T 3gre_A 234 ---TRGIIDIWDI-----------------RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK----------- 282 (437)
T ss_dssp ---TTSCEEEEET-----------------TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----------
T ss_pred ---CCCeEEEEEc-----------------CCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC-----------
Confidence 2336888887 33333 3332 3333333 44778889887765543
Q ss_pred ceeEEeecCCCCCCCccccee-eEEeeeeccCC-----CCCcc-ccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECC
Q 003886 404 DSLHRIDWPTNGNFSSLEKIV-DVIPVVQCAEG-----DCFPG-LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 476 (789)
Q Consensus 404 ~~L~~~d~~~~~~~~~t~~~~-~v~~~~~~~~~-----~~f~g-~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~ 476 (789)
..|.+||+.++.......+.. .+..+.-.+.+ ..+.| .+...+..+.|+ +++ +++++..++ .|..+|+.
T Consensus 283 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~--~i~~wd~~ 358 (437)
T 3gre_A 283 TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATS--SIVMFSLN 358 (437)
T ss_dssp EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGT--EEEEEETT
T ss_pred CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCC--eEEEEECC
Confidence 259999998755321111100 00000000000 00111 122235677888 664 556665555 45556777
Q ss_pred CCcEEEe
Q 003886 477 SGELLRI 483 (789)
Q Consensus 477 tg~~~~l 483 (789)
+++....
T Consensus 359 ~~~~~~~ 365 (437)
T 3gre_A 359 ELSSSKA 365 (437)
T ss_dssp CGGGCEE
T ss_pred CcccceE
Confidence 7764443
No 398
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.80 E-value=8.5e-07 Score=95.39 Aligned_cols=84 Identities=12% Similarity=0.087 Sum_probs=51.2
Q ss_pred ceecCCCCEEEEEecCCCCCCCCcc-ccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCC
Q 003886 377 PRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 455 (789)
Q Consensus 377 p~~SpDG~~la~~s~~~~~~~g~~~-~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg 455 (789)
..++|||++|+....... .+.|. ....|+++|..+++... -+++ . .....+.|+|||
T Consensus 272 ~~~s~d~~~lyV~~~~~~--~~~~~~~~~~V~VID~~t~~vv~-------~i~~---g----------~~p~~i~~s~Dg 329 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQS--AWKLHAAAKEVTSVTGLVGQTSS-------QISL---G----------HDVDAISVAQDG 329 (373)
T ss_pred EEECCCCCEEEEEeccCC--cccccCCCCeEEEEECCCCEEEE-------EEEC---C----------CCcCeEEECCCC
Confidence 578999998766543211 01111 23579999988754421 0111 0 023467899999
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003886 456 CTMLLSSIWGSSQVIISVNVSSGELLRI 483 (789)
Q Consensus 456 ~~l~~~~~~~~~~~l~~~dl~tg~~~~l 483 (789)
++++|..+. +...|..+|+.++++...
T Consensus 330 ~~~l~v~~~-~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 330 GPDLYALSA-GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEEcC-CCCeEEEEECCCCCEEee
Confidence 966666543 235789999999888765
No 399
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.80 E-value=9.2e-09 Score=108.38 Aligned_cols=121 Identities=18% Similarity=0.152 Sum_probs=85.6
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCC--------Cchhh----HHHHHHHHHCCcE---EEEEcCCCCCCCCchhhc
Q 003886 577 EAIFVSSSHKKDCSCDPLIVVLHGGPHSV--------SLSSY----SKSLAFLSSVGYS---LLIVNYRGSLGFGEEALQ 641 (789)
Q Consensus 577 ~~~~~~P~~~~~~~~~P~vv~~HGg~~~~--------~~~~~----~~~~~~la~~Gy~---V~~~d~rGs~G~G~~~~~ 641 (789)
.|....|. .. ..+.||++||..... ....| ......|.++||. |+++|++| +|.+...
T Consensus 29 gG~~~~p~---~~-~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g---~G~S~~~ 101 (342)
T 2x5x_A 29 GGFGGGSC---TA-TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLS---SSEQGSA 101 (342)
T ss_dssp CEEECCSS---CC-CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSC---HHHHTCG
T ss_pred CcccCCCC---CC-CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCC---CCccCCc
Confidence 34455554 22 334588899976632 13356 6678899999998 99999987 4433211
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhC--CCceeEEEEeCCccc
Q 003886 642 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 707 (789)
Q Consensus 642 ~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~--p~~~~a~v~~~pv~~ 707 (789)
.. ........+++.+.++.++++ .+.++|.|+||||||.++..++.++ |++++++|+.+|...
T Consensus 102 ~~-~~~~~~~~~~l~~~I~~l~~~--~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 102 QY-NYHSSTKYAIIKTFIDKVKAY--TGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp GG-CCBCHHHHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred cc-cCCHHHHHHHHHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 10 111223467888888888776 3457899999999999999999988 899999999987653
No 400
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=98.79 E-value=1.6e-08 Score=103.60 Aligned_cols=102 Identities=12% Similarity=0.043 Sum_probs=69.9
Q ss_pred CCCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCC
Q 003886 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (789)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (789)
....|.||++||++++ ...|..... | ..+|.|+++|++| ++.... ...+++++.+.+..+++.- .
T Consensus 18 ~~~~~~lv~lhg~~~~--~~~~~~~~~-l-~~~~~v~~~d~~G---~~~~~~-------~~~~~~~~~~~~~~~i~~~-~ 82 (265)
T 3ils_A 18 MVARKTLFMLPDGGGS--AFSYASLPR-L-KSDTAVVGLNCPY---ARDPEN-------MNCTHGAMIESFCNEIRRR-Q 82 (265)
T ss_dssp TTSSEEEEEECCTTCC--GGGGTTSCC-C-SSSEEEEEEECTT---TTCGGG-------CCCCHHHHHHHHHHHHHHH-C
T ss_pred CCCCCEEEEECCCCCC--HHHHHHHHh-c-CCCCEEEEEECCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh-C
Confidence 3456889999997764 455655555 5 6789999999998 332211 1123555544443333321 1
Q ss_pred CCccEEEEEcCccHHHHHHHHH---hCCCceeEEEEeCCc
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPL 705 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~---~~p~~~~a~v~~~pv 705 (789)
...++.++|||+||.++..++. .++++++++|+.++.
T Consensus 83 ~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~ 122 (265)
T 3ils_A 83 PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAP 122 (265)
T ss_dssp SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCC
Confidence 2358999999999999999987 678889999988764
No 401
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.79 E-value=3.9e-09 Score=116.13 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=79.5
Q ss_pred CCCcEEEEEcCCCCCCCchhhHH-HHHHHHHC-CcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~~-Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (789)
...|+||++||.+.+. ...|.. ....|+++ ||.|+++|+|| +|.+......... ..-.+|+.+.++++.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g---~G~S~~~~~~~~~-~~~~~dl~~~i~~L~~~~g 142 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSS---GAKAEYTQAVQNI-RIVGAETAYLIQQLLTELS 142 (452)
T ss_dssp TTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHH---HHTSCHHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEeccc---ccccccHHHHHhH-HHHHHHHHHHHHHHHHhcC
Confidence 4568999999977653 245655 45666654 99999999997 3332111000000 1114567777888765433
Q ss_pred CCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++.+++.|+|||+||.++..++.++|++++++|+.+|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 143 YNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 567899999999999999999999999999999998754
No 402
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.79 E-value=2.1e-06 Score=97.39 Aligned_cols=304 Identities=8% Similarity=-0.028 Sum_probs=159.7
Q ss_pred cCCCCCceEEEEEeechhhcccceeEEEEEEee-cCCCCccceeecCCcceecccEEEEeC----CCCCeEEEEecCCCC
Q 003886 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVIS-KENENSVTFQWAPFPVEMTGASAVVPS----PSGSKLLVVRNPENE 177 (789)
Q Consensus 103 ~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~lt~~~~~~~~~~~~~~~~S----PdG~~la~~~~~~~~ 177 (789)
..||||+++ |+.+. ...+..+++. .......++..+ .+....++| |||++++......
T Consensus 203 ~~SpDGr~l-yv~~~--------dg~V~viD~~~~t~~~v~~i~~G------~~P~~ia~s~~~~pDGk~l~v~n~~~-- 265 (567)
T 1qks_A 203 RLSASGRYL-FVIGR--------DGKVNMIDLWMKEPTTVAEIKIG------SEARSIETSKMEGWEDKYAIAGAYWP-- 265 (567)
T ss_dssp EECTTSCEE-EEEET--------TSEEEEEETTSSSCCEEEEEECC------SEEEEEEECCSTTCTTTEEEEEEEET--
T ss_pred EECCCCCEE-EEEcC--------CCeEEEEECCCCCCcEeEEEecC------CCCceeEEccccCCCCCEEEEEEccC--
Confidence 357888876 43321 2356666652 111111222222 234577899 7999997765543
Q ss_pred CCeEEEEe-cCCceeEEEecCCC-ccccccCCC-cccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCC
Q 003886 178 SPIQFELW-SQSQLEKEFHVPQT-VHGSVYADG-WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 254 (789)
Q Consensus 178 ~~~~~~i~-~~~~~~~~~~~~~~-~~g~v~~d~-~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (789)
.++..++ .+.+..+.+.+... ..+.-|..+ .+..+..|+++..+++...
T Consensus 266 -~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~--------------------------- 317 (567)
T 1qks_A 266 -PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK--------------------------- 317 (567)
T ss_dssp -TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET---------------------------
T ss_pred -CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec---------------------------
Confidence 3466666 45555555554211 110001011 2346677888765544321
Q ss_pred CcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCC
Q 003886 255 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRP 334 (789)
Q Consensus 255 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~ 334 (789)
....|+++|..+.+...+..+..........|+|||++ ++...+ ..
T Consensus 318 ----------------~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~----~~va~~--------------~s 363 (567)
T 1qks_A 318 ----------------ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY----FITAAN--------------AR 363 (567)
T ss_dssp ----------------TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCE----EEEEEG--------------GG
T ss_pred ----------------CCCeEEEEecCCCccceeeeeeccccccCceECCCCCE----EEEEeC--------------CC
Confidence 23678888887654322211222223456789999996 544442 12
Q ss_pred cceEEEecccccchhhhhhhhcCCCCCCCeeecCCC--C--CccCcce-ecCCCCEEEEEecCCCCCCCCccccceeEEe
Q 003886 335 CALYAVRVSLYKSEASELELKESSSEDLPVVNLTES--I--SSAFFPR-FSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (789)
Q Consensus 335 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~--~--~~~~~p~-~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~ 409 (789)
..|.++|+ .+++......- . .....+. ++|||+.++.+++-. ...|-++
T Consensus 364 n~V~ViD~-----------------~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g---------~~~Vsvi 417 (567)
T 1qks_A 364 NKLVVIDT-----------------KEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG---------DDSVALI 417 (567)
T ss_dssp TEEEEEET-----------------TTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS---------SSEEEEE
T ss_pred CeEEEEEC-----------------CCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC---------CCeEEEe
Confidence 36889998 55544322211 1 1112334 488888775555432 2358899
Q ss_pred ecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeC-C---eEEEEEEECCCCcE-----
Q 003886 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-S---SQVIISVNVSSGEL----- 480 (789)
Q Consensus 410 d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~-~---~~~l~~~dl~tg~~----- 480 (789)
|.++++.... .+.++..+..... ....+..+|||+++|+..... . ...|.++|+++.++
T Consensus 418 d~~~~~~~~~---~~kvv~~i~~~g~---------g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~ 485 (567)
T 1qks_A 418 GTDPEGHPDN---AWKILDSFPALGG---------GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDP 485 (567)
T ss_dssp ECCTTTCTTT---BTSEEEEEECSCS---------CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCC
T ss_pred cCCCCCCccc---cCEEEEEEecCCC---------CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCC
Confidence 9876432111 1122332222110 112245689999998764222 1 34678888765511
Q ss_pred --EEec--------CCCCCceeEEeeecCCEEEEEEeC-CCCCCeEEEEeeccc
Q 003886 481 --LRIT--------PAESNFSWSLLTLDGDNIIAVSSS-PVDVPQVKYGYFVDK 523 (789)
Q Consensus 481 --~~lt--------~~~~~~~~~~~s~dg~~l~~~~ss-~~~p~~i~~~~~~~~ 523 (789)
+.+. ..........|+++|++++++.-+ -.....|.++|.++.
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 486 EFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp CEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 3332 112233456889999999887533 335567888886543
No 403
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.79 E-value=4.4e-07 Score=97.08 Aligned_cols=188 Identities=14% Similarity=0.129 Sum_probs=108.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
++....++++++.++++...+ ....+|+ .++....+.....+ ..+.|++++. +.+. +..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d----~~v~iWd~~~~~~~~~~~~~~~v----------~~v~~~~~~~--~~~~-~~~-- 120 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVK----EVVHIWDDVKKQDVSRIKVDAPV----------KDLFLSREFI--VVSY-GDV-- 120 (355)
T ss_dssp CCCEEEECTTSSEEEEECSST----TEEEEEETTTTEEEEEEECSSCE----------EEEEECSSEE--EEEE-TTE--
T ss_pred CeEEEEEcCCCCEEEEEECCc----cEEEEEECCCCcEEEEEECCCce----------EEEEEcCCEE--EEEE-cCE--
Confidence 466788999999998875543 2567773 45444444433322 6888888753 3222 211
Q ss_pred CCCccCCCC-CCCCCCcCCCCCCCcceeeCCcccccC--CccCceEEEEEccCCc-----------------eEeccCCC
Q 003886 233 KPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYA--GKRQPSLFVININSGE-----------------VQAVKGIP 292 (789)
Q Consensus 233 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~--~~~~~~l~v~d~~~g~-----------------~~~l~~~~ 292 (789)
...|+.... +....... ..+...+.+ ..... +.....|.+||+.+++ ...+ ..
T Consensus 121 i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~ 193 (355)
T 3vu4_A 121 ISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KA 193 (355)
T ss_dssp EEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEE--CC
T ss_pred EEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE--Ec
Confidence 112222111 11111111 000111221 11111 3456789999998875 4445 23
Q ss_pred CCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcc-eEEEecccccchhhhhhhhcCCCCCC-CeeecC-C
Q 003886 293 KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDL-PVVNLT-E 369 (789)
Q Consensus 293 ~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt-~ 369 (789)
....+..++|+|||+. |+..+ .+.. |.++|+ .++ ....+. .
T Consensus 194 h~~~v~~~~~s~~g~~----l~s~s---------------~d~~~v~iwd~-----------------~~~~~~~~~~~g 237 (355)
T 3vu4_A 194 HTNPIKMVRLNRKSDM----VATCS---------------QDGTIIRVFKT-----------------EDGVLVREFRRG 237 (355)
T ss_dssp CSSCEEEEEECTTSSE----EEEEE---------------TTCSEEEEEET-----------------TTCCEEEEEECT
T ss_pred cCCceEEEEECCCCCE----EEEEe---------------CCCCEEEEEEC-----------------CCCcEEEEEEcC
Confidence 3456789999999997 76665 2335 888887 444 345555 2
Q ss_pred -CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCC
Q 003886 370 -SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 370 -~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
+...+...+|||||++|+..+.+. .+.+||+..+.
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~-----------~v~iw~~~~~~ 273 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKW-----------TLHVFEIFNDQ 273 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTC-----------EEEEEESSCCS
T ss_pred CCCCcEEEEEECCCCCEEEEEECCC-----------EEEEEEccCCC
Confidence 566788999999999998877553 58999987653
No 404
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.74 E-value=6.1e-07 Score=98.67 Aligned_cols=205 Identities=10% Similarity=0.075 Sum_probs=118.7
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEec--C---Cc-e--eEEEecCCCccccccCCCcccceeecCCCCEEEE
Q 003886 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELWS--Q---SQ-L--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAY 224 (789)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~~--~---~~-~--~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~ 224 (789)
+.+...+||| ||++||..+..+ .+.+|+ . +. . ....... +.| ..+.|+||++.|+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~h~----~~v------~~~~~~~~~~~l~s 128 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQG-----VIKIWNLKEIIVGEVYSSSLTYDCS----STV------TQITMIPNFDAFAV 128 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTS-----EEEEEEHHHHHTTCCCSCSEEEECS----SCE------EEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCc-----eEEEeECcccccCcccceeeeccCC----CCE------EEEEEeCCCCEEEE
Confidence 4588999999 999999887654 566672 2 22 1 1111112 222 79999999999887
Q ss_pred EeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEcc---CCceEecc---------CCC
Q 003886 225 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ---SGEVQAVK---------GIP 292 (789)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~---~g~~~~l~---------~~~ 292 (789)
.+.+ ..|.+||++ +++..... -.+
T Consensus 129 ~s~d--------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (437)
T 3gre_A 129 SSKD--------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRKINLKN 164 (437)
T ss_dssp EETT--------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGG
T ss_pred EeCC--------------------------------------------CEEEEEEeccccCCceeeccccceeEEEEccC
Confidence 6543 457777763 44332220 000
Q ss_pred --CCCccceEE--EeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeec
Q 003886 293 --KSLSVGQVV--WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL 367 (789)
Q Consensus 293 --~~~~~~~~~--wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~L 367 (789)
....+..+. |+||++. |+..+ .+..|+++|+ .+++ ...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~ 208 (437)
T 3gre_A 165 FGKNEYAVRMRAFVNEEKSL----LVALT---------------NLSRVIIFDI-----------------RTLERLQII 208 (437)
T ss_dssp GSSCCCEEEEEEEECSSCEE----EEEEE---------------TTSEEEEEET-----------------TTCCEEEEE
T ss_pred cccccCceEEEEEEcCCCCE----EEEEe---------------CCCeEEEEeC-----------------CCCeeeEEE
Confidence 111222222 6677775 55554 2347888998 3343 4455
Q ss_pred CC--CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCc-c-cceeeEEeeeeccCCCCCccccc
Q 003886 368 TE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-L-EKIVDVIPVVQCAEGDCFPGLYS 443 (789)
Q Consensus 368 t~--~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~-t-~~~~~v~~~~~~~~~~~f~g~~~ 443 (789)
.. +...+...+|+|||+.|+..+.+. .|.+||+.++..... . .....+..+.
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~v~~~~------------- 264 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRG-----------IIDIWDIRFNVLIRSWSFGDHAPITHVE------------- 264 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTS-----------CEEEEETTTTEEEEEEBCTTCEEEEEEE-------------
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCC-----------eEEEEEcCCccEEEEEecCCCCceEEEE-------------
Confidence 54 456788999999999988777553 599999887543211 1 1111111110
Q ss_pred cCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003886 444 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (789)
Q Consensus 444 ~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~l 483 (789)
..+.|++|++.| +++..++ .|..+|+.+++....
T Consensus 265 ---~~~~~s~~~~~l-~s~~~dg--~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 265 ---VCQFYGKNSVIV-VGGSSKT--FLTIWNFVKGHCQYA 298 (437)
T ss_dssp ---ECTTTCTTEEEE-EEESTTE--EEEEEETTTTEEEEE
T ss_pred ---eccccCCCccEE-EEEcCCC--cEEEEEcCCCcEEEE
Confidence 122577787644 5544444 566668877775543
No 405
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.73 E-value=1.1e-06 Score=91.17 Aligned_cols=253 Identities=10% Similarity=-0.025 Sum_probs=135.4
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (789)
.+.++|||+.+.++... ...|+.++.. ++ ...+.... ......+++|||+.++. ... ...
T Consensus 32 g~~~d~~g~~l~~~~~~--------~~~i~~~~~~--~~-~~~~~~~~-----~~~~~l~~~~dg~l~v~-~~~---~~~ 91 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVR--------QNRTWAWSDD--GQ-LSPEMHPS-----HHQNGHCLNKQGHLIAC-SHG---LRR 91 (296)
T ss_dssp EEEEEGGGTEEEEEEGG--------GTEEEEEETT--SC-EEEEESSC-----SSEEEEEECTTCCEEEE-ETT---TTE
T ss_pred CCeEeCCCCEEEEEeCC--------CCEEEEEECC--CC-eEEEECCC-----CCcceeeECCCCcEEEE-ecC---CCe
Confidence 34556889867665322 2367776642 22 33333221 34678899999985433 221 234
Q ss_pred EEEEec-CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeec-CCCCCCCccCCCCCCCCCCcCCCCCCCcce
Q 003886 181 QFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE-PSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (789)
Q Consensus 181 ~~~i~~-~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (789)
++.++. +++...+........ ......+.++|||+ |+++... .... .+.
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~vtd~~~g~~~--~~~--------------------- 142 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKK-----LNSPNDVCLAPDGS-LWFSDPTYGIDK--PEE--------------------- 142 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEE-----CCCCCCEEECTTSC-EEEEECSHHHHC--GGG---------------------
T ss_pred EEEEcCCCCcEEEEeeccCCCC-----CCCCCCEEECCCCC-EEEECCcccccc--ccc---------------------
Confidence 666663 666655543211110 00125789999997 4432110 0000 000
Q ss_pred eeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceE
Q 003886 259 WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (789)
Q Consensus 259 ~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~ 338 (789)
+...........|+.++.+ ++.+.+ .........++|+|||+. | ++. . ....|+
T Consensus 143 ----~~~~~~~~~~~~l~~~~~~-g~~~~~--~~~~~~~~gi~~s~dg~~----l-v~~-~-------------~~~~i~ 196 (296)
T 3e5z_A 143 ----GYGGEMELPGRWVFRLAPD-GTLSAP--IRDRVKPNGLAFLPSGNL----L-VSD-T-------------GDNATH 196 (296)
T ss_dssp ----SSCCCCCSSSCEEEEECTT-SCEEEE--ECCCSSEEEEEECTTSCE----E-EEE-T-------------TTTEEE
T ss_pred ----cccccccCCCcEEEEECCC-CCEEEe--ecCCCCCccEEECCCCCE----E-EEe-C-------------CCCeEE
Confidence 0000000123579999887 676665 233334568999999997 6 443 1 223688
Q ss_pred EEecccccchhhhhhhhcCCCCCCCe----eecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 339 AVRVSLYKSEASELELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~----~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
++++. ..+.. +.+....+.....++++||+ |+ ++.. ..|+++|.++
T Consensus 197 ~~~~~----------------~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~-v~~~-----------~~v~~~~~~g- 246 (296)
T 3e5z_A 197 RYCLN----------------ARGETEYQGVHFTVEPGKTDGLRVDAGGL-IW-ASAG-----------DGVHVLTPDG- 246 (296)
T ss_dssp EEEEC----------------SSSCEEEEEEEECCSSSCCCSEEEBTTSC-EE-EEET-----------TEEEEECTTS-
T ss_pred EEEEC----------------CCCcCcCCCeEeeCCCCCCCeEEECCCCC-EE-EEcC-----------CeEEEECCCC-
Confidence 88872 12333 22222234466789999998 33 3322 2489998753
Q ss_pred CCCCcccceeeEEeeeeccCCCCCccccccCCCCCcc-ccCCCEEEEEEEeCCeEEEEEEECCCCcEEE
Q 003886 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW-LSDGCTMLLSSIWGSSQVIISVNVSSGELLR 482 (789)
Q Consensus 415 ~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~w-s~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~ 482 (789)
+.. ..+..+. .+..+.| ++|++.|++++. ..||++++.+++++.
T Consensus 247 ~~~----------~~~~~~~----------~~~~~~f~~~d~~~L~v~t~----~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 247 DEL----------GRVLTPQ----------TTSNLCFGGPEGRTLYMTVS----TEFWSIETNVRGLEH 291 (296)
T ss_dssp CEE----------EEEECSS----------CCCEEEEESTTSCEEEEEET----TEEEEEECSCCBCCC
T ss_pred CEE----------EEEECCC----------CceeEEEECCCCCEEEEEcC----CeEEEEEcccccccc
Confidence 211 0011100 1235567 589998887753 269999998887654
No 406
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.73 E-value=2e-08 Score=103.41 Aligned_cols=104 Identities=17% Similarity=0.120 Sum_probs=68.7
Q ss_pred cEEEEEcCCCCCCCc-hhhHHHHHHHHHC--CcEEEEEcCCCCCCCCchhhccCCCCCCcccHH-HHHHHHHHHHHcCCC
Q 003886 593 PLIVVLHGGPHSVSL-SSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN-DVLTAIDHVIDMGLA 668 (789)
Q Consensus 593 P~vv~~HGg~~~~~~-~~~~~~~~~la~~--Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~-D~~~~i~~l~~~~~~ 668 (789)
+.||++||.+.+... ..|......|++. ||.|+++|+ | +|.+..... .+. ..+. ++.+.++++......
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G---~g~s~~~~~--~~~-~~~~~~~~~~~~~l~~~~~l 78 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-G---KTLREDVEN--SFF-LNVNSQVTTVCQILAKDPKL 78 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-S---SSHHHHHHH--HHH-SCHHHHHHHHHHHHHSCGGG
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-C---CCCcccccc--ccc-cCHHHHHHHHHHHHHhhhhc
Confidence 348899997665322 4677778888765 889999997 6 554321000 000 1233 333444444332111
Q ss_pred CCccEEEEEcCccHHHHHHHHHhCCCc-eeEEEEeCC
Q 003886 669 NPSKVTVVGGSHGGFLTTHLIGQAPDK-FVAAAARNP 704 (789)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~~~~~p~~-~~a~v~~~p 704 (789)
.+++.++|||+||.++..++.++|++ ++.+|+.++
T Consensus 79 -~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 79 -QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp -TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred -cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 26899999999999999999999984 999998775
No 407
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.2e-07 Score=106.95 Aligned_cols=162 Identities=9% Similarity=-0.031 Sum_probs=94.4
Q ss_pred ceEEEEEccCCceE------------eccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEE
Q 003886 273 PSLFVININSGEVQ------------AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (789)
Q Consensus 273 ~~l~v~d~~~g~~~------------~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (789)
..|.+||+.+++.. .+ ......+..++|+|++ . |+..+ .+..|.++
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l--~~h~~~v~sv~~s~~~-~----lasgs---------------~DgtV~lW 292 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTL--SLADSLITTFDFLSPT-T----VVCGF---------------KNGFVAEF 292 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEE--CCTTTCEEEEEESSSS-E----EEEEE---------------TTSEEEEE
T ss_pred CeEEEEEcCCCccccccceeecCceEEE--EcCCCCEEEEEecCCC-e----EEEEe---------------CCCEEEEE
Confidence 45777777665321 22 1223467789999864 4 65554 23368888
Q ss_pred ecccccchhhhhhhhcCCCCCC-C-eeecCCCCCccCcc--eecCCC-CEEEEEecCCCCCCCCccccceeEEeecCCCC
Q 003886 341 RVSLYKSEASELELKESSSEDL-P-VVNLTESISSAFFP--RFSPDG-KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~-~-~~~Lt~~~~~~~~p--~~SpDG-~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
|+ .++ . ...+..+...+... .|+||| +.||..+.+. .+.+||+.++.
T Consensus 293 D~-----------------~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~-----------tvklWD~~~~~ 344 (524)
T 2j04_B 293 DL-----------------TDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG-----------YFYIFNPKDIA 344 (524)
T ss_dssp ET-----------------TBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS-----------EEEEECGGGHH
T ss_pred EC-----------------CCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC-----------eEEEEECCCCC
Confidence 87 332 2 23455666667777 689999 7777766543 58999986533
Q ss_pred CCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcE-EEecCCCCCceeEE
Q 003886 416 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSL 494 (789)
Q Consensus 416 ~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~-~~lt~~~~~~~~~~ 494 (789)
......+. ..+ ..+..+.|+||++.+ +++..++. +..+|+.++.. ..+......+....
T Consensus 345 ~~~~~~~~--------------~~~---~~v~~v~fsp~~~~l-~s~~~d~t--v~lwd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 345 TTKTTVSR--------------FRG---SNLVPVVYCPQIYSY-IYSDGASS--LRAVPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp HHCEEEEE--------------CSC---CSCCCEEEETTTTEE-EEECSSSE--EEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred cccccccc--------------ccc---CcccceEeCCCcCeE-EEeCCCCc--EEEEECcccccceeeecCCCceEEEE
Confidence 21100000 000 124567899999864 44444444 45557777764 44444444455567
Q ss_pred eeecCCEEEE
Q 003886 495 LTLDGDNIIA 504 (789)
Q Consensus 495 ~s~dg~~l~~ 504 (789)
|+|+|..|+.
T Consensus 405 ~Sp~g~~l~S 414 (524)
T 2j04_B 405 VSRLHPMVLA 414 (524)
T ss_dssp CCSSCCBCEE
T ss_pred eCCCCCeEEE
Confidence 8888886553
No 408
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.70 E-value=1.5e-06 Score=93.09 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=57.6
Q ss_pred cceecCCCCEEEEEecCCCCCCCCcc-ccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC
Q 003886 376 FPRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (789)
Q Consensus 376 ~p~~SpDG~~la~~s~~~~~~~g~~~-~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (789)
..+|+|||++++........ .|.+. ....|+++|+.+++... .++ .. . ...+.|+||
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~-~~~~~~~~~~v~viD~~t~~~v~-------~i~---~~----------~-p~~ia~spd 315 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGK-EGTHKFPAAEIWVMDTKTKQRVA-------RIP---GR----------D-ALSMTIDQQ 315 (361)
T ss_dssp CEEEETTTTEEEEEEESSCC-TTCTTCCCSEEEEEETTTTEEEE-------EEE---CT----------T-CCEEEEETT
T ss_pred EEEEecCCCeEEEEEccCCC-cccccCCCceEEEEECCCCcEEE-------EEe---cC----------C-eeEEEECCC
Confidence 46899999987654431100 01111 13579999988754321 111 00 0 246789999
Q ss_pred CCEEEEEEEeCCeEEEEEEECCCC--cEEEe-cCCCCCceeEEeeecCC
Q 003886 455 GCTMLLSSIWGSSQVIISVNVSSG--ELLRI-TPAESNFSWSLLTLDGD 500 (789)
Q Consensus 455 g~~l~~~~~~~~~~~l~~~dl~tg--~~~~l-t~~~~~~~~~~~s~dg~ 500 (789)
|++||.+ +. ..|..+|+.++ ++... ...........++|+|+
T Consensus 316 g~~l~v~-n~---~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 316 RNLMLTL-DG---GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTEEEEE-CS---SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCEEEEe-CC---CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9977644 33 55777799999 65443 33333334567788876
No 409
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.69 E-value=6.2e-07 Score=97.37 Aligned_cols=59 Identities=3% Similarity=0.090 Sum_probs=37.9
Q ss_pred cccEEEEeCC--------CCCeEEEEecCCCCCCeEEEEec--CC-ceeEEEecCCCccccccCCCcccceeecCCCCE-
Q 003886 154 TGASAVVPSP--------SGSKLLVVRNPENESPIQFELWS--QS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETL- 221 (789)
Q Consensus 154 ~~~~~~~~SP--------dG~~la~~~~~~~~~~~~~~i~~--~~-~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~- 221 (789)
+.+...+||| ||+.||..+.+. ...+|+ .+ ......... +.+ ..++|+|++..
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~-----tv~~Wd~~~~~~~~~~~~~~----~~v------~~v~~~p~~~~~ 201 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDC-----TLIIWRLTDEGPILAGYPLS----SPG------ISVQFRPSNPNQ 201 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTS-----EEEEEEEETTEEEEEEEECS----SCE------EEEEEETTEEEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCC-----eEEEEECCCCceeeeecCCC----CCc------EEEEECCCCCce
Confidence 4588899998 999999887754 566773 22 222333222 223 68999999875
Q ss_pred EEEEee
Q 003886 222 IAYVAE 227 (789)
Q Consensus 222 la~~~~ 227 (789)
|+..+.
T Consensus 202 l~~~~~ 207 (393)
T 4gq1_A 202 LIVGER 207 (393)
T ss_dssp EEEEET
T ss_pred EEecCC
Confidence 444433
No 410
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.68 E-value=2.6e-06 Score=89.76 Aligned_cols=252 Identities=6% Similarity=-0.009 Sum_probs=133.1
Q ss_pred ecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003886 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (789)
Q Consensus 102 ~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (789)
+.+++||+ +.++.. ....|+.++. .+++.+.+.... ...+...+++|||+.++...........+
T Consensus 50 ~~~~~~g~-l~~~~~--------~~~~i~~~d~--~~~~~~~~~~~~----~~~~~~i~~~~dg~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 50 LNFDRQGQ-LFLLDV--------FEGNIFKINP--ETKEIKRPFVSH----KANPAAIKIHKDGRLFVCYLGDFKSTGGI 114 (333)
T ss_dssp EEECTTSC-EEEEET--------TTCEEEEECT--TTCCEEEEEECS----SSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred cEECCCCC-EEEEEC--------CCCEEEEEeC--CCCcEEEEeeCC----CCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence 34568887 434321 2346777664 333333333111 13477889999997554433221122457
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
+.++ .++....++... ... .....+.++|||+ |++.......
T Consensus 115 ~~~d~~~~~~~~~~~~~-~~~------~~~~~i~~d~~g~-l~v~~~~~~~----------------------------- 157 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDL-STA------YCIDDMVFDSKGG-FYFTDFRGYS----------------------------- 157 (333)
T ss_dssp EEECTTSCSCEEEECSS-SSC------CCEEEEEECTTSC-EEEEECCCBT-----------------------------
T ss_pred EEEeCCCCEEEEEEccC-ccC------CcccceEECCCCC-EEEEeccccc-----------------------------
Confidence 7776 444444333211 110 1226789999996 4443321100
Q ss_pred CCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEE
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (789)
......|+++|.++++.+.+ .........++|+|||+. |++... ....|+++
T Consensus 158 --------~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~dg~~----l~v~~~--------------~~~~i~~~ 209 (333)
T 2dg1_A 158 --------TNPLGGVYYVSPDFRTVTPI--IQNISVANGIALSTDEKV----LWVTET--------------TANRLHRI 209 (333)
T ss_dssp --------TBCCEEEEEECTTSCCEEEE--EEEESSEEEEEECTTSSE----EEEEEG--------------GGTEEEEE
T ss_pred --------cCCCceEEEEeCCCCEEEEe--ecCCCcccceEECCCCCE----EEEEeC--------------CCCeEEEE
Confidence 01235799999888777665 222224567899999997 666542 12268888
Q ss_pred ecccccchhhhhhhhcCCCCCCCeee--------cCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecC
Q 003886 341 RVSLYKSEASELELKESSSEDLPVVN--------LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (789)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~--------Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~ 412 (789)
++.. ++..... +.. ........+++||+. |++... ...|+++|..
T Consensus 210 d~~~---------------~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l--~v~~~~---------~~~v~~~d~~ 262 (333)
T 2dg1_A 210 ALED---------------DGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNL--YVAMYG---------QGRVLVFNKR 262 (333)
T ss_dssp EECT---------------TSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCE--EEEEET---------TTEEEEECTT
T ss_pred EecC---------------CCcCcccccceEEEecCC-CCCCCceEECCCCCE--EEEEcC---------CCEEEEECCC
Confidence 8720 1111111 111 124556889999983 333221 1368999864
Q ss_pred CCCCCCcccceeeEEeeeeccCC--CCCccccccCCCCCccccCCCEEEEEEEeC---CeEEEEEEECC
Q 003886 413 TNGNFSSLEKIVDVIPVVQCAEG--DCFPGLYSSSILSNPWLSDGCTMLLSSIWG---SSQVIISVNVS 476 (789)
Q Consensus 413 ~~~~~~~t~~~~~v~~~~~~~~~--~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~---~~~~l~~~dl~ 476 (789)
+ +.. ..+..+.. ..+ ..+..+.|++||+.||+++..+ ....||++++.
T Consensus 263 g-~~~----------~~~~~~~~~~g~~-----~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 263 G-YPI----------GQILIPGRDEGHM-----LRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp S-CEE----------EEEECTTGGGTCS-----CBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred C-CEE----------EEEEcCCCccccc-----cCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 3 211 00111100 000 0234678899998898877653 34678888864
No 411
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.65 E-value=2.2e-06 Score=90.92 Aligned_cols=157 Identities=11% Similarity=0.058 Sum_probs=98.2
Q ss_pred ccEEEEeCC--CCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 155 GASAVVPSP--SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 155 ~~~~~~~SP--dG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
.+...+|+| +|++++..+..+ .+.+| ..++..+.... ..... +..++|+|||+.||..+.
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~--~~~~~------i~~~~~~pdg~~lasg~~--- 190 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVHSA--KSDVE------YSSGVLHKDSLLLALYSP--- 190 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEECC--CSSCC------CCEEEECTTSCEEEEECT---
T ss_pred CEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEEec--CCCCc------eEEEEECCCCCEEEEEcC---
Confidence 478899999 999998877554 35566 34444333321 11112 278999999998887533
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceE--eccCCCCCCccceEEEeeCCCC
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ--AVKGIPKSLSVGQVVWAPLNEG 308 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~--~l~~~~~~~~~~~~~wSPDg~~ 308 (789)
+..|.+||+.+++.. .+. ......+..++|+|||+.
T Consensus 191 -----------------------------------------dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 191 -----------------------------------------DGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp -----------------------------------------TSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSSE
T ss_pred -----------------------------------------CCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCCE
Confidence 257899999988754 442 113457889999999997
Q ss_pred CccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCC---CCCccC--cceecCCC
Q 003886 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE---SISSAF--FPRFSPDG 383 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~---~~~~~~--~p~~SpDG 383 (789)
|+..+. . .|.++|+. .......+.. +..... ..+|+|||
T Consensus 229 ----l~s~~~---------------~-~v~iwd~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 229 ----MVVECD---------------Q-TVVCFDLR----------------KDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp ----EEEEES---------------S-BEEEEETT----------------SSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred ----EEEEeC---------------C-eEEEEEcC----------------CCCcceeecccccccccccceEEEECCCC
Confidence 766651 1 58888873 1222222222 222222 48999999
Q ss_pred CEEEEEecCCCCCCCCccccceeEEeecCCCC
Q 003886 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 384 ~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
++|+..+..+ ..+.+|++..+.
T Consensus 273 ~~l~~~s~~d----------~~i~v~~~~~~~ 294 (343)
T 3lrv_A 273 KNMIAYSNES----------NSLTIYKFDKKT 294 (343)
T ss_dssp SEEEEEETTT----------TEEEEEEECTTT
T ss_pred CEEEEecCCC----------CcEEEEEEcccc
Confidence 9998776522 247888876543
No 412
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.65 E-value=2.8e-08 Score=108.04 Aligned_cols=111 Identities=17% Similarity=0.236 Sum_probs=81.2
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCc---EEEEEcCCCCCCCCchh----hccCCC-----------------
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEA----LQSLPG----------------- 645 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy---~V~~~d~rGs~G~G~~~----~~~~~~----------------- 645 (789)
...|.||++||.+.+ ...|......|+++|| .|+++|++| +|.+. .....+
T Consensus 20 ~~~ppVVLlHG~g~s--~~~w~~la~~La~~Gy~~~~Via~DlpG---~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~ 94 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGS--AGQFESQGMRFAANGYPAEYVKTFEYDT---ISWALVVETDMLFSGLGSEFGLNISQIIDPET 94 (484)
T ss_dssp -CCCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEEECCCH---HHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHH
T ss_pred CCCCEEEEECCCCCC--HHHHHHHHHHHHHcCCCcceEEEEECCC---CCcccccccccccccccccccccccccccccc
Confidence 456779999997664 5678888889999999 799999997 44320 000000
Q ss_pred ----------CCCcccHHHHHHHHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCC---CceeEEEEeCCccc
Q 003886 646 ----------KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCN 707 (789)
Q Consensus 646 ----------~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p---~~~~a~v~~~pv~~ 707 (789)
......++++.+.++.++++ .+.+++.|+|||+||.+++.++.++| ++++++|+.+|..+
T Consensus 95 l~~v~~~~~~~~~~~~~~dla~~L~~ll~~--lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 95 LDKILSKSRERLIDETFSRLDRVIDEALAE--SGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccccccccCchhhhHHHHHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 00112356777788888776 34578999999999999999999887 48999999998765
No 413
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.65 E-value=6.2e-06 Score=89.44 Aligned_cols=85 Identities=19% Similarity=0.173 Sum_probs=51.0
Q ss_pred cceecCCCCEEEEEecCCCCCCCCcc-ccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC
Q 003886 376 FPRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (789)
Q Consensus 376 ~p~~SpDG~~la~~s~~~~~~~g~~~-~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (789)
...++|||++|+...... ..|.|. ..++|.++|..+.+... -+++-. ....+.|+||
T Consensus 323 ~va~s~dg~rlyVa~~~~--~~gthk~~s~~VsVID~~T~kvv~-------~I~vg~-------------~P~gia~spD 380 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQR--DEWKHKAASRFVVVLNAETGERIN-------KIELGH-------------EIDSINVSQD 380 (426)
T ss_dssp CEEEEGGGTEEEEEEEEC--CTTCTTSCEEEEEEEETTTCCEEE-------EEEEEE-------------EECEEEECCS
T ss_pred eeEEcCCCCEEEEEeccc--ccccccCCCCEEEEEECCCCeEEE-------EEECCC-------------CcCeEEEccC
Confidence 368999999876554321 012221 23579999998865421 111111 1246689999
Q ss_pred CCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003886 455 GCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (789)
Q Consensus 455 g~~l~~~~~~~~~~~l~~~dl~tg~~~~l 483 (789)
|+.++|.+++. ...|.++|+.++++.+-
T Consensus 381 g~~~lyv~n~~-s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 381 AEPLLYALSAG-TQTLHIYDAATGEELRS 408 (426)
T ss_dssp SSCEEEEEETT-TTEEEEEETTTCCEEEE
T ss_pred CCEEEEEEcCC-CCeEEEEECCCCCEEEE
Confidence 99444554432 34688899999987654
No 414
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.65 E-value=2e-08 Score=109.80 Aligned_cols=111 Identities=12% Similarity=0.047 Sum_probs=76.3
Q ss_pred CCCcEEEEEcCCCCCCCchhhHH-HHHH-HHHCCcEEEEEcCCCCCCCCchhhccCCCCCC-cccHHHHHHHHHHHHHcC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSK-SLAF-LSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG-SQDVNDVLTAIDHVIDMG 666 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~-~~~~-la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~ 666 (789)
...|+||++||...+. ...|.. .... ++..+|.|+++|++| +|.+..... ... ..-.+++.+.++++.++.
T Consensus 67 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g---~g~s~y~~~--~~~~~~v~~~la~ll~~L~~~~ 140 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKS---GSRTAYSQA--SQNVRIVGAEVAYLVGVLQSSF 140 (449)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHH---HHSSCHHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCc---ccCCccHHH--HHHHHHHHHHHHHHHHHHHHhc
Confidence 4568999999966542 235654 3344 456799999999997 332211000 000 011345666777776443
Q ss_pred CCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 667 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
.++.+++.|+|||+||.+|..++.++|++++.+++..|..
T Consensus 141 g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 141 DYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 3577899999999999999999999999999999887753
No 415
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.63 E-value=1.3e-06 Score=93.11 Aligned_cols=256 Identities=13% Similarity=0.039 Sum_probs=136.6
Q ss_pred EEEeCCCCCeEEEEecC------CCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 158 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 158 ~~~~SPdG~~la~~~~~------~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
.+++||||++|++.... +.....+..++ ..++..+.+.++...+ .. ....-.++.+||||++|+.....+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~-~~-~g~~P~~ia~SpDGk~lyVan~~~- 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR-FS-VGPRVHIIGNCASSACLLFFLFGS- 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS-CC-BSCCTTSEEECTTSSCEEEEECSS-
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc-cc-cCCCcceEEEcCCCCEEEEEccCC-
Confidence 79999999998776421 01123466666 5667766666541100 00 000015899999999876653321
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEE--EEccCCceEeccCCCCCCccceEEEeeCCCC
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV--ININSGEVQAVKGIPKSLSVGQVVWAPLNEG 308 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v--~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~ 308 (789)
...+.+ +|+.+ +..+. .++. +...|+|+.
T Consensus 146 -----------------------------------------~~~v~V~~iD~~t--v~~i~-v~~~-----~~~~p~g~~ 176 (368)
T 1mda_H 146 -----------------------------------------SAAAGLSVPGASD--DQLTK-SASC-----FHIHPGAAA 176 (368)
T ss_dssp -----------------------------------------SCEEEEEETTTEE--EEEEE-CSSC-----CCCEEEETT
T ss_pred -----------------------------------------CCeEEEEEEchhh--ceEEE-CCCc-----eEEccCCCe
Confidence 145666 77766 44442 2211 234688887
Q ss_pred CccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCC-----CCeee-cCCCCCccCcceecCC
Q 003886 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-----LPVVN-LTESISSAFFPRFSPD 382 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~~-Lt~~~~~~~~p~~SpD 382 (789)
.++.. .. ...+..+++ ++ ++... .+........|..+++
T Consensus 177 ----~~~~~-~~-------------dg~~~~vd~-----------------~~~~~~~~~v~~~~t~~i~vg~~P~~~~~ 221 (368)
T 1mda_H 177 ----THYLG-SC-------------PASLAASDL-----------------AAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp ----EEECC-CC-------------TTSCEEEEC-----------------CSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred ----EEEEE-cC-------------CCCEEEEEC-----------------ccccccCCeEEEEeeeeeeCCCCcccccc
Confidence 55432 22 124556676 22 22110 0000000123334889
Q ss_pred CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCC-CCCccccccCCCCCccccCCCEEEEE
Q 003886 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG-DCFPGLYSSSILSNPWLSDGCTMLLS 461 (789)
Q Consensus 383 G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~-~~f~g~~~~~~~~~~ws~Dg~~l~~~ 461 (789)
++.++|.+. . .++++|+.++.... +..+..... ..-.+........+.+++||+++|+.
T Consensus 222 ~~~~~~vs~-~-----------~V~viD~~~~~~~v--------~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 222 PGMLVWAVA-S-----------SILQGDIPAAGATM--------KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp TTEEEECBS-S-----------CCEEEECCSSCCEE--------ECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred CCEEEEEcC-C-----------EEEEEECCCCcceE--------EEEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 999999885 3 48999986543211 000000000 00000000112235699999999887
Q ss_pred EEeC-C-----eEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEe-CCCCCCeEEEEeeccc
Q 003886 462 SIWG-S-----SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS-SPVDVPQVKYGYFVDK 523 (789)
Q Consensus 462 ~~~~-~-----~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s-s~~~p~~i~~~~~~~~ 523 (789)
.... + ...+..+|+.++++..-.+.........+++||++++++.. ..+ .+.++|+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~---~VsVID~~t~ 347 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTE---VLDIYDAASD 347 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTT---EEEEEESSSC
T ss_pred eccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCC---eEEEEECCCC
Confidence 6523 3 23455999999886654333322344688999998888776 343 3788887643
No 416
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.63 E-value=8.8e-06 Score=86.68 Aligned_cols=102 Identities=15% Similarity=0.046 Sum_probs=60.8
Q ss_pred cCcceecCCCCEEEEEecCCCCCCCCccc-cceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccc
Q 003886 374 AFFPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 452 (789)
Q Consensus 374 ~~~p~~SpDG~~la~~s~~~~~~~g~~~~-~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws 452 (789)
.....++|||++|+....... .|.|.. .++++++|..+.+.... +++-. ....+.++
T Consensus 282 ~q~~a~~~~~~~lyV~~~~~~--~~~hk~~~~~V~viD~~t~kv~~~-------i~vg~-------------~~~~lavs 339 (386)
T 3sjl_D 282 WQQVAYHRALDRIYLLVDQRD--EWRHKTASRFVVVLDAKTGERLAK-------FEMGH-------------EIDSINVS 339 (386)
T ss_dssp SSCEEEETTTTEEEEEEEECC--TTCTTSCEEEEEEEETTTCCEEEE-------EEEEE-------------EECEEEEC
T ss_pred cceeeECCCCCeEEEEecccc--ccccCCCCCEEEEEECCCCeEEEE-------EECCC-------------CcceEEEC
Confidence 345778999998876654221 133333 36899999988665311 11100 12356789
Q ss_pred cCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeec
Q 003886 453 SDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 498 (789)
Q Consensus 453 ~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~d 498 (789)
+|++.++|.+++ +...|..+|..++++.+-....+......+++|
T Consensus 340 ~D~~~~ly~tn~-~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 340 QDEKPLLYALST-GDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp SSSSCEEEEEET-TTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred CCCCeEEEEEcC-CCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 999855555443 345678899999988765554443333445544
No 417
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.63 E-value=2.2e-06 Score=95.03 Aligned_cols=272 Identities=8% Similarity=-0.008 Sum_probs=150.0
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCcc
Q 003886 160 VPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 237 (789)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 237 (789)
.++++|++|+..+..+ .+.+|+ .++....+. +..+.| ..+.|+||+ .|+..+.+.... .|+
T Consensus 127 ~~~~~~~~l~sgs~dg-----~i~vwd~~~~~~~~~~~---~h~~~V------~~l~~~~~~-~l~s~s~dg~i~--vwd 189 (464)
T 3v7d_B 127 CLQFEDNYVITGADDK-----MIRVYDSINKKFLLQLS---GHDGGV------WALKYAHGG-ILVSGSTDRTVR--VWD 189 (464)
T ss_dssp EEEEETTEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSSCE------EEEEECSTT-EEEEEETTSCEE--EEE
T ss_pred EEEECCCEEEEEcCCC-----cEEEEECCCCcEEEEEe---CCCcCE------EEEEEcCCC-EEEEEeCCCCEE--EEE
Confidence 4555788888776554 456673 344333332 223333 789999999 677666655432 343
Q ss_pred CCCCCCCCCCcCCCCCCCcceee--CCcccccCCccCceEEEEEccCCceEeccCC--------------------CCCC
Q 003886 238 LGSTKGGSSDKDCNSWKGQGDWE--EDWGETYAGKRQPSLFVININSGEVQAVKGI--------------------PKSL 295 (789)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~--~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~--------------------~~~~ 295 (789)
............+........|. ++....+++..+..|.+||+.+++....... ....
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 32222222222233333333444 3333345556678899999987753221000 0001
Q ss_pred ccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccC
Q 003886 296 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAF 375 (789)
Q Consensus 296 ~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~ 375 (789)
...-..++|+++. |+..+ .+..|.++|+. .......+..+...+.
T Consensus 270 ~~~v~~~~~~~~~----l~~~~---------------~d~~i~vwd~~----------------~~~~~~~~~~~~~~v~ 314 (464)
T 3v7d_B 270 MASVRTVSGHGNI----VVSGS---------------YDNTLIVWDVA----------------QMKCLYILSGHTDRIY 314 (464)
T ss_dssp SSCEEEEEEETTE----EEEEE---------------TTSCEEEEETT----------------TTEEEEEECCCSSCEE
T ss_pred cceEEEEcCCCCE----EEEEe---------------CCCeEEEEECC----------------CCcEEEEecCCCCCEE
Confidence 1122345788876 65554 23468888982 2233455666677788
Q ss_pred cceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCC
Q 003886 376 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 455 (789)
Q Consensus 376 ~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg 455 (789)
...|+|||+.|+..+.+. .|++||+.++.......+.. ..+..+.|+ +
T Consensus 315 ~~~~~~~~~~l~sg~~dg-----------~i~vwd~~~~~~~~~~~~h~-------------------~~v~~~~~~--~ 362 (464)
T 3v7d_B 315 STIYDHERKRCISASMDT-----------TIRIWDLENGELMYTLQGHT-------------------ALVGLLRLS--D 362 (464)
T ss_dssp EEEEETTTTEEEEEETTS-----------CEEEEETTTTEEEEEECCCS-------------------SCEEEEEEC--S
T ss_pred EEEEcCCCCEEEEEeCCC-----------cEEEEECCCCcEEEEEeCCC-------------------CcEEEEEEc--C
Confidence 999999999988776543 59999987754321111100 112334554 4
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 456 CTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 456 ~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
+ .++++..++... .+|+.+++...............++++++.++... + ..+.+.++.++
T Consensus 363 ~-~l~s~s~dg~v~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d----g~i~iwd~~~g 422 (464)
T 3v7d_B 363 K-FLVSAAADGSIR--GWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E----NQFNIYNLRSG 422 (464)
T ss_dssp S-EEEEEETTSEEE--EEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T----TEEEEEETTTC
T ss_pred C-EEEEEeCCCcEE--EEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C----CeEEEEECCCC
Confidence 5 445666666544 45777776554443333345567888888665543 2 35777787654
No 418
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.61 E-value=1.7e-06 Score=90.31 Aligned_cols=252 Identities=8% Similarity=-0.040 Sum_probs=131.7
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (789)
-|.++|||+.+.|+... ...|+.++. + ++...+.... ......+++|||+.++ .... ...
T Consensus 49 gp~~~~~g~~l~~~d~~--------~~~i~~~~~--~-g~~~~~~~~~-----~~~~gl~~d~dG~l~v-~~~~---~~~ 108 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLV--------GRRVLGWRE--D-GTVDVLLDAT-----AFTNGNAVDAQQRLVH-CEHG---RRA 108 (305)
T ss_dssp EEEEEGGGTEEEEEETT--------TTEEEEEET--T-SCEEEEEESC-----SCEEEEEECTTSCEEE-EETT---TTE
T ss_pred CCeEeCCCCEEEEEECC--------CCEEEEEeC--C-CCEEEEeCCC-----CccceeeECCCCCEEE-EECC---CCE
Confidence 45677999988776322 234666653 2 2233333222 3466789999998443 3222 224
Q ss_pred EEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 181 QFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 181 ~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
++.+..+++...+.....+.. ......+.++|||+ |+++ ... +.... .+.
T Consensus 109 v~~~~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~dG~-l~~t-d~~------~g~~~-----------------~~~ 158 (305)
T 3dr2_A 109 ITRSDADGQAHLLVGRYAGKR-----LNSPNDLIVARDGA-IWFT-DPP------FGLRK-----------------PSQ 158 (305)
T ss_dssp EEEECTTSCEEEEECEETTEE-----CSCCCCEEECTTSC-EEEE-CCS------GGGSC-----------------GGG
T ss_pred EEEECCCCCEEEEEeccCCCc-----cCCCCCEEECCCCC-EEEe-CcC------CCccc-----------------ccc
Confidence 666664465544443211110 00125789999997 4443 100 00000 000
Q ss_pred CCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEE
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (789)
.. ..........||++|.++|+++.+ . .-.....++|+|||+. |+++...... +....|+++
T Consensus 159 ~~--~~~~~~~~~~v~~~d~~~g~~~~~--~-~~~~p~gl~~spdg~~----lyv~~~~~~~---------~~~~~i~~~ 220 (305)
T 3dr2_A 159 GC--PADPELAHHSVYRLPPDGSPLQRM--A-DLDHPNGLAFSPDEQT----LYVSQTPEQG---------HGSVEITAF 220 (305)
T ss_dssp SC--CCCCSSSCEEEEEECSSSCCCEEE--E-EESSEEEEEECTTSSE----EEEEECCC------------CCCEEEEE
T ss_pred cc--ccccccCCCeEEEEcCCCCcEEEE--e-cCCCCcceEEcCCCCE----EEEEecCCcC---------CCCCEEEEE
Confidence 00 000001236799999988888777 3 2234567899999997 6655421100 012368888
Q ss_pred ecccccchhhhhhhhcCCCCCCCe---eec-CCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCC
Q 003886 341 RVSLYKSEASELELKESSSEDLPV---VNL-TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~---~~L-t~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
++. ++.. +.+ ....+.....++++||+ +|++... .|+++|.++ +.
T Consensus 221 ~~~-----------------~~~l~~~~~~~~~~~~~pdgi~~d~~G~--lwv~~~~-----------gv~~~~~~g-~~ 269 (305)
T 3dr2_A 221 AWR-----------------DGALHDRRHFASVPDGLPDGFCVDRGGW--LWSSSGT-----------GVCVFDSDG-QL 269 (305)
T ss_dssp EEE-----------------TTEEEEEEEEECCSSSCCCSEEECTTSC--EEECCSS-----------EEEEECTTS-CE
T ss_pred Eec-----------------CCCccCCeEEEECCCCCCCeEEECCCCC--EEEecCC-----------cEEEECCCC-CE
Confidence 872 1111 111 11234456788999998 3455321 388998643 21
Q ss_pred CCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEEC
Q 003886 417 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 475 (789)
Q Consensus 417 ~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl 475 (789)
. ..+. .+. .+..++|++|++.|++++. ..||++++
T Consensus 270 ~-------~~~~---~~~----------~~~~~~f~~d~~~L~it~~----~~l~~~~~ 304 (305)
T 3dr2_A 270 L-------GHIP---TPG----------TASNCTFDQAQQRLFITGG----PCLWMLPL 304 (305)
T ss_dssp E-------EEEE---CSS----------CCCEEEECTTSCEEEEEET----TEEEEEEC
T ss_pred E-------EEEE---CCC----------ceeEEEEeCCCCEEEEEcC----CeEEEEEC
Confidence 1 0111 110 2346678899998887753 25787764
No 419
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.57 E-value=3.2e-08 Score=108.24 Aligned_cols=111 Identities=11% Similarity=0.094 Sum_probs=73.9
Q ss_pred CCCcEEEEEcCCCCCCCchhhHH-HHHHHHH-CCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~-~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (789)
...|+||++||...+. ...|.. ....|.+ .+|.|+++|++|. |.+...... .....-.+++.+.++++.++..
T Consensus 68 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~---g~s~y~~~~-~~~~~~a~~l~~ll~~L~~~~g 142 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKG---SQTSYTQAA-NNVRVVGAQVAQMLSMLSANYS 142 (450)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHH---HSSCHHHHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccc---cCCcchHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 4579999999976542 224554 3444544 5899999999972 221100000 0000113466667777754323
Q ss_pred CCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
++.+++.|+|||+||.+|..++.++|+ ++.+++..|..
T Consensus 143 ~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 143 YSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred CChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 577899999999999999999999998 99999887753
No 420
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.54 E-value=2.9e-05 Score=83.33 Aligned_cols=202 Identities=11% Similarity=-0.010 Sum_probs=97.4
Q ss_pred cCceEEEEEccCCceEeccCCCCC--CccceEEEeeCCCCCccEEEEEeecCCc--eeeeeeeec---cCCcceEEEecc
Q 003886 271 RQPSLFVININSGEVQAVKGIPKS--LSVGQVVWAPLNEGLHQYLVFVGWSSET--RKLGIKYCY---NRPCALYAVRVS 343 (789)
Q Consensus 271 ~~~~l~v~d~~~g~~~~l~~~~~~--~~~~~~~wSPDg~~~~~~l~f~~~~~~~--~~~g~~~~~---~~~~~l~~~d~~ 343 (789)
....|.++|.+++++..--..... ....++.|+||++. +++++...+ ...|+.... .....|..+|+
T Consensus 162 ~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~-----mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~- 235 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEV-----LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL- 235 (462)
T ss_dssp SCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTE-----EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET-
T ss_pred CCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCE-----EEEccCcCccccccccchhhhhhccCCEEEEEEC-
Confidence 457899999999987654111111 12336889999995 555532211 111211110 22457999998
Q ss_pred cccchhhhhhhhcCCCCCCC-eeecCCC-C-CccCcc--eecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCC
Q 003886 344 LYKSEASELELKESSSEDLP-VVNLTES-I-SSAFFP--RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 418 (789)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~-~~~Lt~~-~-~~~~~p--~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~ 418 (789)
.+++ ...+.-+ . ...... .|+|||++++....-+.. .-.++|+++..+.+...
T Consensus 236 ----------------~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~-----~Lss~V~v~~~d~g~~~- 293 (462)
T 2ece_A 236 ----------------RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK-----DLSSSIWLWFYEDGKWN- 293 (462)
T ss_dssp ----------------TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT-----TCCEEEEEEEEETTEEE-
T ss_pred ----------------CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc-----CCCceEEEEEecCCcee-
Confidence 3333 2233322 1 122233 459999976655540000 01235776665442211
Q ss_pred cccceeeEEeeeeccCCCCCcccc------ccCCCCCccccCCCEEEEEEEeCCeEEEEEEECC-CCcEE---EecCCC-
Q 003886 419 SLEKIVDVIPVVQCAEGDCFPGLY------SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS-SGELL---RITPAE- 487 (789)
Q Consensus 419 ~t~~~~~v~~~~~~~~~~~f~g~~------~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~-tg~~~---~lt~~~- 487 (789)
...++++-..+.....|.+- ......+.+|+||++||++....+. |..+|+. .++.+ .+..+.
T Consensus 294 ----~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~--VavfdV~d~~~~~lv~~I~tGG~ 367 (462)
T 2ece_A 294 ----AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE--VRQYDISNPFKPVLTGKVKLGGI 367 (462)
T ss_dssp ----EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE--EEEEECSSTTSCEEEEEEECBTT
T ss_pred ----EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE--EEEEEecCCCCcEEEEEEEeCCe
Confidence 11111111110000010000 0134577899999999877544454 4444542 33222 222210
Q ss_pred -------------CCceeEEeeecCCEEEEEE
Q 003886 488 -------------SNFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 488 -------------~~~~~~~~s~dg~~l~~~~ 506 (789)
+......+++||++|+.+.
T Consensus 368 ~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 368 FHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 0123457899999887766
No 421
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.54 E-value=2.2e-05 Score=79.99 Aligned_cols=204 Identities=10% Similarity=0.115 Sum_probs=121.1
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-ceeEEEecC-CCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-QLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-~~~~~~~~~-~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
....++|+|++++|+++... ...++.+...+ ....+.... ... .++.++|+++.|+++..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~---~~~I~~~~~~g~~~~~~~~~~~~~p----------~~ia~d~~~~~lyv~d~----- 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDIS---EPSIGRASLHGGEPTTIIRQDLGSP----------EGIALDHLGRTIFWTDS----- 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEETT---TTEEEEEESSSCCCEEEECTTCCCE----------EEEEEETTTTEEEEEET-----
T ss_pred cEEEEEEecCCCEEEEEECC---CCEEEEEecCCCCcEEEEECCCCCc----------cEEEEEecCCeEEEEEC-----
Confidence 45678999999998776543 33577777433 333333211 122 57889999888776532
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCcc
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~ 311 (789)
....|+++++++...+.+ .... .....++++|++..
T Consensus 99 --------------------------------------~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~--- 135 (267)
T 1npe_A 99 --------------------------------------QLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGN--- 135 (267)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTE---
T ss_pred --------------------------------------CCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCE---
Confidence 225788888876655444 2222 35668899998876
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEEe
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~s 390 (789)
|+++.... ....|+++++ ++...+.+. .........+++|||+.|++..
T Consensus 136 -lyv~~~~~------------~~~~I~~~~~-----------------dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 136 -LYWTDWNR------------DNPKIETSHM-----------------DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp -EEEEECCS------------SSCEEEEEET-----------------TSCCCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEEECCC------------CCcEEEEEec-----------------CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 66554210 1236888887 433333332 2233466789999999887776
Q ss_pred cCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEE
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (789)
... .+|+++|..+.... .+.. ....| .....|+..||++.. +...|
T Consensus 186 ~~~----------~~I~~~~~~g~~~~-------~~~~------~~~~P---------~gi~~d~~~lyva~~--~~~~v 231 (267)
T 1npe_A 186 AGT----------HRAECLNPAQPGRR-------KVLE------GLQYP---------FAVTSYGKNLYYTDW--KTNSV 231 (267)
T ss_dssp TTT----------TEEEEEETTEEEEE-------EEEE------CCCSE---------EEEEEETTEEEEEET--TTTEE
T ss_pred CCC----------CEEEEEecCCCceE-------EEec------CCCCc---------eEEEEeCCEEEEEEC--CCCeE
Confidence 432 47999998653211 1111 00111 123456777877532 23468
Q ss_pred EEEECCCCcEEEe
Q 003886 471 ISVNVSSGELLRI 483 (789)
Q Consensus 471 ~~~dl~tg~~~~l 483 (789)
+++|.++|+....
T Consensus 232 ~~~d~~~g~~~~~ 244 (267)
T 1npe_A 232 IAMDLAISKEMDT 244 (267)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEeCCCCCceEE
Confidence 8999988875543
No 422
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.54 E-value=7.1e-06 Score=83.61 Aligned_cols=178 Identities=9% Similarity=-0.031 Sum_probs=104.9
Q ss_pred ceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
..|++++++++..+.+ .... .....++++|+++. |+++. .. ...|+++++
T Consensus 58 ~~I~~~~~~g~~~~~~--~~~~~~~p~~ia~d~~~~~----lyv~d-~~-------------~~~I~~~~~--------- 108 (267)
T 1npe_A 58 PSIGRASLHGGEPTTI--IRQDLGSPEGIALDHLGRT----IFWTD-SQ-------------LDRIEVAKM--------- 108 (267)
T ss_dssp TEEEEEESSSCCCEEE--ECTTCCCEEEEEEETTTTE----EEEEE-TT-------------TTEEEEEET---------
T ss_pred CEEEEEecCCCCcEEE--EECCCCCccEEEEEecCCe----EEEEE-CC-------------CCEEEEEEc---------
Confidence 6799999988766555 2222 35678899998876 65553 21 236888887
Q ss_pred hhhhcCCCCCCCeeecCC-CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeee
Q 003886 352 LELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (789)
Q Consensus 352 ~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~ 430 (789)
++...+.+.. ........+++|++..|++..... ...+|+++++++...+.+ ..
T Consensus 109 --------~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~--------~~~~I~~~~~dg~~~~~~-------~~-- 163 (267)
T 1npe_A 109 --------DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR--------DNPKIETSHMDGTNRRIL-------AQ-- 163 (267)
T ss_dssp --------TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS--------SSCEEEEEETTSCCCEEE-------EC--
T ss_pred --------CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC--------CCcEEEEEecCCCCcEEE-------EE--
Confidence 4433333322 223456678999888887766331 124688888765332111 00
Q ss_pred eccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCC
Q 003886 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 510 (789)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~ 510 (789)
. ... ....+++++|++.||++.. +...|+++|++++..+.+...... -..++.+++.++++....
T Consensus 164 -~--~~~-------~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~~~--P~gi~~d~~~lyva~~~~- 228 (267)
T 1npe_A 164 -D--NLG-------LPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEGLQY--PFAVTSYGKNLYYTDWKT- 228 (267)
T ss_dssp -T--TCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEECCCS--EEEEEEETTEEEEEETTT-
T ss_pred -C--CCC-------CCcEEEEcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecCCCC--ceEEEEeCCEEEEEECCC-
Confidence 0 001 1235678999998988653 334788899876655554332221 124556777776655433
Q ss_pred CCCeEEEEeec
Q 003886 511 DVPQVKYGYFV 521 (789)
Q Consensus 511 ~p~~i~~~~~~ 521 (789)
..|++++..
T Consensus 229 --~~v~~~d~~ 237 (267)
T 1npe_A 229 --NSVIAMDLA 237 (267)
T ss_dssp --TEEEEEETT
T ss_pred --CeEEEEeCC
Confidence 247777654
No 423
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.53 E-value=9.6e-06 Score=85.53 Aligned_cols=216 Identities=10% Similarity=0.035 Sum_probs=120.8
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
.....++|||| +| |+.+.. ...+..++ .+++..+.+.+.... +. ...-.++.+ ++++|+.+ ..
T Consensus 85 ~p~~i~~~~~g-~l-yv~~~~--~~~v~~iD~~t~~~~~~i~~g~~~-~~---~~~p~~i~~--~~~~lyv~-~~----- 148 (328)
T 3dsm_A 85 SPRYIHFLSDE-KA-YVTQIW--DYRIFIINPKTYEITGYIECPDMD-ME---SGSTEQMVQ--YGKYVYVN-CW----- 148 (328)
T ss_dssp SEEEEEEEETT-EE-EEEEBS--CSEEEEEETTTTEEEEEEECTTCC-TT---TCBCCCEEE--ETTEEEEE-EC-----
T ss_pred CCcEEEEeCCC-eE-EEEECC--CCeEEEEECCCCeEEEEEEcCCcc-cc---CCCcceEEE--ECCEEEEE-cC-----
Confidence 45677899998 55 555421 23577777 556655555543300 00 001145666 56665443 21
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (789)
+ ....|.++|++++++... ++.......+.++|||+ +
T Consensus 149 ------------------------------~------~~~~v~viD~~t~~~~~~--i~~g~~p~~i~~~~dG~-----l 185 (328)
T 3dsm_A 149 ------------------------------S------YQNRILKIDTETDKVVDE--LTIGIQPTSLVMDKYNK-----M 185 (328)
T ss_dssp ------------------------------T------TCCEEEEEETTTTEEEEE--EECSSCBCCCEECTTSE-----E
T ss_pred ------------------------------C------CCCEEEEEECCCCeEEEE--EEcCCCccceEEcCCCC-----E
Confidence 0 135799999999886554 23333456789999997 6
Q ss_pred EEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCee-ecCCC-CCccCcceecCCCCEEEEEec
Q 003886 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-ISSAFFPRFSPDGKFLVFLSA 391 (789)
Q Consensus 314 ~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~~-~~~~~~p~~SpDG~~la~~s~ 391 (789)
+++++..... ..+ ......|+++|. ++++.. .+.-. .......+|||||++|++...
T Consensus 186 ~v~~~~~~~~---~~~-~~~~~~v~~id~-----------------~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 186 WTITDGGYEG---SPY-GYEAPSLYRIDA-----------------ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EEEBCCBCTT---CSS-CBCCCEEEEEET-----------------TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred EEEECCCccC---Ccc-ccCCceEEEEEC-----------------CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 6665322100 000 001247999997 555443 33222 224678899999998766432
Q ss_pred CCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe--CCeEE
Q 003886 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--GSSQV 469 (789)
Q Consensus 392 ~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~--~~~~~ 469 (789)
.++++|..++...... +.. . ... ....+.++|+++.||++... .....
T Consensus 245 -------------~v~~~d~~t~~~~~~~-----~~~---~--~~~-------~p~gi~vdp~~g~lyva~~~~y~~~~~ 294 (328)
T 3dsm_A 245 -------------DIWRMPVEADRVPVRP-----FLE---F--RDT-------KYYGLTVNPNNGEVYVADAIDYQQQGI 294 (328)
T ss_dssp -------------SEEEEETTCSSCCSSC-----SBC---C--CSS-------CEEEEEECTTTCCEEEEECTTSSSEEE
T ss_pred -------------EEEEEECCCCceeeee-----eec---C--CCC-------ceEEEEEcCCCCeEEEEcccccccCCE
Confidence 4899998876542100 000 0 001 12356788877778776421 34567
Q ss_pred EEEEECCCCcEE
Q 003886 470 IISVNVSSGELL 481 (789)
Q Consensus 470 l~~~dl~tg~~~ 481 (789)
|+++|.+ |++.
T Consensus 295 V~v~d~~-g~~~ 305 (328)
T 3dsm_A 295 VYRYSPQ-GKLI 305 (328)
T ss_dssp EEEECTT-CCEE
T ss_pred EEEECCC-CCEE
Confidence 8888887 5543
No 424
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.53 E-value=2.7e-05 Score=84.75 Aligned_cols=215 Identities=11% Similarity=0.022 Sum_probs=121.3
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~ 232 (789)
.....++|+|+|+ |+++ +. ....+..++ .++....+....... . +.|+|||+.|+.....
T Consensus 131 ~~P~~la~d~~g~-lyv~-d~--~~~~I~~id~~~g~~~~~~~~~~~~----------~-ia~~~~g~~l~~~d~~---- 191 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAY-QR--DDPRVRLISVDDNKVTTVHPGFKGG----------K-PAVTKDKQRVYSIGWE---- 191 (409)
T ss_dssp CCEEEEEECSTTE-EEEE-ET--TTTEEEEEETTTTEEEEEEETCCBC----------B-CEECTTSSEEEEEBSS----
T ss_pred CCceEEEEeCCCC-EEEE-ec--CCCcEEEEECCCCEEEEeeccCCCC----------c-eeEecCCCcEEEEecC----
Confidence 4566788999997 5444 33 223577676 445555544432222 3 8999999977665321
Q ss_pred CCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceE-eccC-CC-CCCccceEEEeeCCCCC
Q 003886 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKG-IP-KSLSVGQVVWAPLNEGL 309 (789)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~-~l~~-~~-~~~~~~~~~wSPDg~~~ 309 (789)
....|++++..++... .+.. .. .......++++|++..
T Consensus 192 --------------------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~- 232 (409)
T 3hrp_A 192 --------------------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW- 232 (409)
T ss_dssp --------------------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE-
T ss_pred --------------------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe-
Confidence 1137899998876542 2200 12 2335667899996665
Q ss_pred ccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec----CCC-CCcc-C-cceecCC
Q 003886 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL----TES-ISSA-F-FPRFSPD 382 (789)
Q Consensus 310 ~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L----t~~-~~~~-~-~p~~SpD 382 (789)
|++ +.. ...|+++|+ +++....+ ... .+.. . ..+|+|+
T Consensus 233 ---lyv-~d~--------------~~~I~~~d~-----------------~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 233 ---LYF-VDS--------------NKNFGRFNV-----------------KTQEVTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp ---EEE-ECT--------------TCEEEEEET-----------------TTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred ---EEE-EEC--------------CCcEEEEEC-----------------CCCCEEEEecccccCCCCCCccccEEEeCC
Confidence 666 421 226999997 44444433 221 2222 3 7899998
Q ss_pred CCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeecc-CCCCCcc--c--cccCCCCCccccCCCE
Q 003886 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA-EGDCFPG--L--YSSSILSNPWLSDGCT 457 (789)
Q Consensus 383 G~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~-~~~~f~g--~--~~~~~~~~~ws~Dg~~ 457 (789)
+..|++.... ..+|++++.++. ...+ .... ......| . -......+++++||+
T Consensus 278 ~g~lyv~d~~----------~~~I~~~~~~g~-~~~~----------~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~- 335 (409)
T 3hrp_A 278 DSNFYMSDQN----------LSSVYKITPDGE-CEWF----------CGSATQKTVQDGLREEALFAQPNGMTVDEDGN- 335 (409)
T ss_dssp TTEEEEEETT----------TTEEEEECTTCC-EEEE----------EECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-
T ss_pred CCEEEEEeCC----------CCEEEEEecCCC-EEEE----------EeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-
Confidence 7777665432 246999987653 1100 0000 0000000 0 001234678899998
Q ss_pred EEEEEEeC-CeEEEEEEECCCCcEEEecC
Q 003886 458 MLLSSIWG-SSQVIISVNVSSGELLRITP 485 (789)
Q Consensus 458 l~~~~~~~-~~~~l~~~dl~tg~~~~lt~ 485 (789)
||++- . +...|.++++.+|++..+..
T Consensus 336 lyvad--~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 336 FYIVD--GFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp EEEEE--TTTTCEEEEEETTTTEEEEEEE
T ss_pred EEEEe--CCCCCEEEEEECCCCEEEEEeC
Confidence 76653 3 45578889977888877654
No 425
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.51 E-value=8.4e-06 Score=85.97 Aligned_cols=240 Identities=15% Similarity=0.007 Sum_probs=131.2
Q ss_pred CCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCC
Q 003886 164 SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTK 242 (789)
Q Consensus 164 dG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~ 242 (789)
++++|+.+.... ..+..++ .+++..+.+...... ..+.++||| +| |++..
T Consensus 52 ~~~~lyv~~~~~---~~v~viD~~t~~~~~~i~~~~~p----------~~i~~~~~g-~l-yv~~~-------------- 102 (328)
T 3dsm_A 52 RDGIGWIVVNNS---HVIFAIDINTFKEVGRITGFTSP----------RYIHFLSDE-KA-YVTQI-------------- 102 (328)
T ss_dssp ETTEEEEEEGGG---TEEEEEETTTCCEEEEEECCSSE----------EEEEEEETT-EE-EEEEB--------------
T ss_pred ECCEEEEEEcCC---CEEEEEECcccEEEEEcCCCCCC----------cEEEEeCCC-eE-EEEEC--------------
Confidence 567776665432 2466666 556655544322223 578899998 54 54431
Q ss_pred CCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC----CccceEEEeeCCCCCccEEEEEee
Q 003886 243 GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS----LSVGQVVWAPLNEGLHQYLVFVGW 318 (789)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~----~~~~~~~wSPDg~~~~~~l~f~~~ 318 (789)
....|+++|++++++......... .....+++ +++. |+ ++.
T Consensus 103 ----------------------------~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~----ly-v~~ 147 (328)
T 3dsm_A 103 ----------------------------WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKY----VY-VNC 147 (328)
T ss_dssp ----------------------------SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTE----EE-EEE
T ss_pred ----------------------------CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCE----EE-EEc
Confidence 125799999999887543101110 13456666 5554 44 442
Q ss_pred cCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCee-ecCCCCCccCcceecCCCCEEEEEecCCCCCC
Q 003886 319 SSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTESISSAFFPRFSPDGKFLVFLSAKSSVDS 397 (789)
Q Consensus 319 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~ 397 (789)
.. ....|+++|+ ++++.. .+.. ........++|||+ +++.........
T Consensus 148 ~~------------~~~~v~viD~-----------------~t~~~~~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~ 196 (328)
T 3dsm_A 148 WS------------YQNRILKIDT-----------------ETDKVVDELTI-GIQPTSLVMDKYNK-MWTITDGGYEGS 196 (328)
T ss_dssp CT------------TCCEEEEEET-----------------TTTEEEEEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTC
T ss_pred CC------------CCCEEEEEEC-----------------CCCeEEEEEEc-CCCccceEEcCCCC-EEEEECCCccCC
Confidence 11 1236999998 555433 3332 23456789999998 545543320000
Q ss_pred CCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCC
Q 003886 398 GAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 477 (789)
Q Consensus 398 g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~t 477 (789)
........|+++|..+++.. ..+..+.. .....++++||+++||+... .++++|+.+
T Consensus 197 ~~~~~~~~v~~id~~t~~v~----------~~~~~~~g--------~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t 253 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVE----------KQFKFKLG--------DWPSEVQLNGTRDTLYWINN-----DIWRMPVEA 253 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEE----------EEEECCTT--------CCCEEEEECTTSCEEEEESS-----SEEEEETTC
T ss_pred ccccCCceEEEEECCCCeEE----------EEEecCCC--------CCceeEEEecCCCEEEEEcc-----EEEEEECCC
Confidence 00001257999998765431 11111100 01346789999998887632 789999998
Q ss_pred CcEEE--ecCC-CCCceeEEeeecCCEEEEEE-eCCCCCCeEEEEeec
Q 003886 478 GELLR--ITPA-ESNFSWSLLTLDGDNIIAVS-SSPVDVPQVKYGYFV 521 (789)
Q Consensus 478 g~~~~--lt~~-~~~~~~~~~s~dg~~l~~~~-ss~~~p~~i~~~~~~ 521 (789)
+++.. +... ........++++++.++.+. .+......|++++..
T Consensus 254 ~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 254 DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 88632 1111 12233346777677766664 222334557777754
No 426
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.50 E-value=4.9e-06 Score=87.73 Aligned_cols=233 Identities=10% Similarity=0.062 Sum_probs=126.0
Q ss_pred EecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003886 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (789)
Q Consensus 101 ~~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (789)
.|.++||++.+.++... ...|+.++. .+++...++. + ..+..++|+|||+.++.. .. .
T Consensus 53 gp~~~~~~~~l~~~d~~--------~~~i~~~d~--~~~~~~~~~~-~-----~~v~~i~~~~dg~l~v~~-~~-----g 110 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNIL--------ERELHELHL--ASGRKTVHAL-P-----FMGSALAKISDSKQLIAS-DD-----G 110 (326)
T ss_dssp EEEEETTTTEEEEEEGG--------GTEEEEEET--TTTEEEEEEC-S-----SCEEEEEEEETTEEEEEE-TT-----E
T ss_pred CCeEeCCCCEEEEEECC--------CCEEEEEEC--CCCcEEEEEC-C-----CcceEEEEeCCCeEEEEE-CC-----C
Confidence 34567888777665322 236777765 2333322221 1 346778899999876643 21 3
Q ss_pred EEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCccee
Q 003886 181 QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (789)
Q Consensus 181 ~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (789)
++.++ .+++...+........ ...+..+.++|||+ |++.......
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~v~~~~~~~---------------------------- 156 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLP-----GNRSNDGRMHPSGA-LWIGTMGRKA---------------------------- 156 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCT-----TEEEEEEEECTTSC-EEEEEEETTC----------------------------
T ss_pred EEEEECCCCcEEEEeeCCCCCC-----CCCCCCEEECCCCC-EEEEeCCCcC----------------------------
Confidence 77777 4666555544321110 11236789999998 4444322100
Q ss_pred eCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEE
Q 003886 260 EEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 339 (789)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~ 339 (789)
......||+++ +|+.+.+ .........++|+|||+. |++... ....|++
T Consensus 157 ---------~~~~~~l~~~~--~g~~~~~--~~~~~~~~~i~~s~dg~~----lyv~~~--------------~~~~I~~ 205 (326)
T 2ghs_A 157 ---------ETGAGSIYHVA--KGKVTKL--FADISIPNSICFSPDGTT----GYFVDT--------------KVNRLMR 205 (326)
T ss_dssp ---------CTTCEEEEEEE--TTEEEEE--EEEESSEEEEEECTTSCE----EEEEET--------------TTCEEEE
T ss_pred ---------CCCceEEEEEe--CCcEEEe--eCCCcccCCeEEcCCCCE----EEEEEC--------------CCCEEEE
Confidence 00235789998 5776655 222223457899999997 776542 1236888
Q ss_pred EecccccchhhhhhhhcCCCCCC-C------eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecC
Q 003886 340 VRVSLYKSEASELELKESSSEDL-P------VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (789)
Q Consensus 340 ~d~~~~~~~~~~~~~~~~~~~~~-~------~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~ 412 (789)
+++.. +++ . ...+....+......+++||+. |++... ...|+++|..
T Consensus 206 ~d~~~---------------~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l--wva~~~---------~~~v~~~d~~ 259 (326)
T 2ghs_A 206 VPLDA---------------RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI--WNARWG---------EGAVDRYDTD 259 (326)
T ss_dssp EEBCT---------------TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE--EEEEET---------TTEEEEECTT
T ss_pred EEccc---------------ccCCcccCceEEEECCCCCCCCCeeEECCCCCE--EEEEeC---------CCEEEEECCC
Confidence 88720 122 1 1122222334456788899973 333211 1358999873
Q ss_pred CCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccc-cCCCEEEEEEEeCC
Q 003886 413 TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGS 466 (789)
Q Consensus 413 ~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws-~Dg~~l~~~~~~~~ 466 (789)
++.. ..+. .+. ..+..++|+ +|++.||+++...+
T Consensus 260 -g~~~-------~~i~---~~~---------~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 260 -GNHI-------ARYE---VPG---------KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp -CCEE-------EEEE---CSC---------SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred -CCEE-------EEEE---CCC---------CCcEEEEEecCCCCEEEEEecCCC
Confidence 2221 0010 000 012356787 88888888765543
No 427
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.48 E-value=3.2e-05 Score=82.98 Aligned_cols=72 Identities=15% Similarity=0.074 Sum_probs=40.3
Q ss_pred ccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeec------cCCCCCccccccCC
Q 003886 373 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC------AEGDCFPGLYSSSI 446 (789)
Q Consensus 373 ~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~------~~~~~f~g~~~~~~ 446 (789)
......+|||||+| |++++. .+.|.++|+...+...+. ..+++-.. +.+...+ ...
T Consensus 322 ~pa~I~lS~DGrfL-YVSnrg---------~d~VavfdV~d~~~~~lv----~~I~tGG~~~~~~~~~G~~~~----ggP 383 (462)
T 2ece_A 322 LVTDIDISLDDKFL-YLSLWG---------IGEVRQYDISNPFKPVLT----GKVKLGGIFHRADHPAGHKLT----GAP 383 (462)
T ss_dssp CCCCEEECTTSCEE-EEEETT---------TTEEEEEECSSTTSCEEE----EEEECBTTTTCBCCTTSCCCC----SCC
T ss_pred ceeEEEECCCCCEE-EEEeCC---------CCEEEEEEecCCCCcEEE----EEEEeCCeeccccccccccCC----CCC
Confidence 46788999999986 556553 357999998533221111 11111100 0000011 123
Q ss_pred CCCccccCCCEEEEEE
Q 003886 447 LSNPWLSDGCTMLLSS 462 (789)
Q Consensus 447 ~~~~ws~Dg~~l~~~~ 462 (789)
..+.++|||++||++.
T Consensus 384 r~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 384 QMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTSSEEEEEC
T ss_pred CEEEEcCCCCEEEEEc
Confidence 5678999999998876
No 428
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.47 E-value=3.3e-07 Score=82.45 Aligned_cols=82 Identities=17% Similarity=0.263 Sum_probs=56.4
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCc
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (789)
.|.||++| +. ...|... |+ ++|.|+++|+|| +|.+..... . ++++.+.+..+++. ++.+
T Consensus 22 ~~~vv~~H-~~----~~~~~~~---l~-~~~~v~~~d~~G---~G~s~~~~~------~-~~~~~~~~~~~~~~--~~~~ 80 (131)
T 2dst_A 22 GPPVLLVA-EE----ASRWPEA---LP-EGYAFYLLDLPG---YGRTEGPRM------A-PEELAHFVAGFAVM--MNLG 80 (131)
T ss_dssp SSEEEEES-SS----GGGCCSC---CC-TTSEEEEECCTT---STTCCCCCC------C-HHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEEc-CC----HHHHHHH---Hh-CCcEEEEECCCC---CCCCCCCCC------C-HHHHHHHHHHHHHH--cCCC
Confidence 47899999 21 2233322 44 459999999998 454432111 1 56666666666655 3557
Q ss_pred cEEEEEcCccHHHHHHHHHhCCC
Q 003886 672 KVTVVGGSHGGFLTTHLIGQAPD 694 (789)
Q Consensus 672 rv~l~G~S~GG~~a~~~~~~~p~ 694 (789)
++.++|||+||.+++.++.++|.
T Consensus 81 ~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 81 APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp SCEEEECGGGGGGHHHHHHTTCC
T ss_pred ccEEEEEChHHHHHHHHHhcCCc
Confidence 89999999999999999999885
No 429
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.47 E-value=7.1e-07 Score=88.84 Aligned_cols=90 Identities=13% Similarity=0.069 Sum_probs=65.0
Q ss_pred CcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCc
Q 003886 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (789)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (789)
.|.|+++||.+++ ...|......|.. |.|+.+|++| ++. ..+|+.+.++.+. ...
T Consensus 17 ~~~l~~~hg~~~~--~~~~~~~~~~l~~--~~v~~~d~~g---~~~-------------~~~~~~~~i~~~~-----~~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVLGY--GLMYQNLSSRLPS--YKLCAFDFIE---EED-------------RLDRYADLIQKLQ-----PEG 71 (230)
T ss_dssp SEEEEEECCTTCC--GGGGHHHHHHCTT--EEEEEECCCC---STT-------------HHHHHHHHHHHHC-----CSS
T ss_pred CCCEEEECCCCCc--hHHHHHHHHhcCC--CeEEEecCCC---HHH-------------HHHHHHHHHHHhC-----CCC
Confidence 4779999997664 4567666677754 9999999986 332 1345555555431 135
Q ss_pred cEEEEEcCccHHHHHHHHHhC---CCceeEEEEeCCcc
Q 003886 672 KVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLC 706 (789)
Q Consensus 672 rv~l~G~S~GG~~a~~~~~~~---p~~~~a~v~~~pv~ 706 (789)
++.++|||+||.++..++.+. +++++++|+.++..
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~ 109 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYK 109 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCE
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCC
Confidence 799999999999999988764 36788888887654
No 430
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.46 E-value=1e-05 Score=88.97 Aligned_cols=168 Identities=12% Similarity=0.120 Sum_probs=97.7
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CC--------ceeEEEecCCCccccccCCCcccceeecCC-CCEEE
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QS--------QLEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIA 223 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~--------~~~~~~~~~~~~~g~v~~d~~~~~~~wSpD-g~~la 223 (789)
.+...+|||||++||...... +......+|+ .+ +.........+..+.| ..++|+|+ ++.|+
T Consensus 94 ~v~~l~~spdg~~lav~~~sg-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V------~~v~~~p~~~~~la 166 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSS-EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMV------IDMKWNPTVPSMVA 166 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEET-TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSE------EEEEECSSCTTEEE
T ss_pred cccEEEEcCCCCEEEEEEecc-CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCce------EEEEECCCCCCEEE
Confidence 478899999999998642111 1112455562 11 1111122222222233 78999998 66666
Q ss_pred EEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEe
Q 003886 224 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWA 303 (789)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wS 303 (789)
..+.+ ..|.+||+.++...... ......+..++|+
T Consensus 167 s~s~D--------------------------------------------g~v~iwD~~~~~~~~~~-~~~~~~v~~v~ws 201 (434)
T 2oit_A 167 VCLAD--------------------------------------------GSIAVLQVTETVKVCAT-LPSTVAVTSVCWS 201 (434)
T ss_dssp EEETT--------------------------------------------SCEEEEEESSSEEEEEE-ECGGGCEEEEEEC
T ss_pred EEECC--------------------------------------------CeEEEEEcCCCcceeec-cCCCCceeEEEEc
Confidence 65432 56899999887543221 1223467789999
Q ss_pred eCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCC-------CCccCc
Q 003886 304 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES-------ISSAFF 376 (789)
Q Consensus 304 PDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~-------~~~~~~ 376 (789)
|||+. |+..+ .+..|.++|+ .+.....+..+ ...+..
T Consensus 202 pdg~~----lasgs---------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 202 PKGKQ----LAVGK---------------QNGTVVQYLP-----------------TLQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp TTSSC----EEEEE---------------TTSCEEEECT-----------------TCCEEEEECCCTTCCTTSCEEEEE
T ss_pred CCCCE----EEEEc---------------CCCcEEEEcc-----------------CCcccccccCCcccCCCCceeEEE
Confidence 99998 87665 2236888887 32222222211 225678
Q ss_pred ceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 377 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 377 p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
..|++++..++..+..+ |.......++++++...
T Consensus 246 v~w~~~~~~l~~~~~~d----g~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAAD----GTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTEEEEEEEETT----CCSSSCCEEEEEECCCT
T ss_pred EEEecCceEEEEEccCC----CccCCCCceEEEEeccC
Confidence 89999998876555443 11112345888888754
No 431
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.45 E-value=5.7e-06 Score=85.91 Aligned_cols=238 Identities=10% Similarity=0.014 Sum_probs=126.3
Q ss_pred ecCCCCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003886 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (789)
Q Consensus 102 ~~~spdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (789)
|.++|++..+.++... ...|+.++.. ++....+.. + ..+...+++|||+ |++... ..+
T Consensus 18 p~w~~~~~~l~~~d~~--------~~~i~~~d~~--~~~~~~~~~-~-----~~~~~i~~~~dG~-l~v~~~-----~~l 75 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIP--------AKKVCRWDSF--TKQVQRVTM-D-----APVSSVALRQSGG-YVATIG-----TKF 75 (297)
T ss_dssp EEEETTTTEEEEEETT--------TTEEEEEETT--TCCEEEEEC-S-----SCEEEEEEBTTSS-EEEEET-----TEE
T ss_pred CeEECCCCEEEEEECC--------CCEEEEEECC--CCcEEEEeC-C-----CceEEEEECCCCC-EEEEEC-----CeE
Confidence 4456777777665322 2356776642 222222211 1 3467889999999 333322 257
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceee
Q 003886 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (789)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (789)
+.++ .+++.+.+........ ......+.++|||+ |++.........
T Consensus 76 ~~~d~~~g~~~~~~~~~~~~~-----~~~~~di~~d~dG~-l~~~~~~~~~~~--------------------------- 122 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDNDKK-----NNRFNDGKVDPAGR-YFAGTMAEETAP--------------------------- 122 (297)
T ss_dssp EEEETTTTEEEEEEECCTTCS-----SEEEEEEEECTTSC-EEEEEEECCSBT---------------------------
T ss_pred EEEECCCCcEEEEEecCCCCC-----CCCCCCEEECCCCC-EEEecCCccccc---------------------------
Confidence 7777 4566555554322111 01236789999998 555433211000
Q ss_pred CCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEE
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (789)
.........||.++.+ ++...+ ...-.....++|+|||+. |+++.. ....|+++
T Consensus 123 -----~~~~~~~~~l~~~d~~-g~~~~~--~~~~~~pngi~~spdg~~----lyv~~~--------------~~~~i~~~ 176 (297)
T 3g4e_A 123 -----AVLERHQGALYSLFPD-HHVKKY--FDQVDISNGLDWSLDHKI----FYYIDS--------------LSYSVDAF 176 (297)
T ss_dssp -----TBCCTTCEEEEEECTT-SCEEEE--EEEESBEEEEEECTTSCE----EEEEEG--------------GGTEEEEE
T ss_pred -----ccccCCCcEEEEEECC-CCEEEE--eeccccccceEEcCCCCE----EEEecC--------------CCCcEEEE
Confidence 0000123578888875 444444 122224567899999997 665541 12257777
Q ss_pred ecccccchhhhhhhhcCCCCCCCe---e---ecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 341 RVSLYKSEASELELKESSSEDLPV---V---NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~---~---~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
+++. .++.. + .+....+.....++++||+ |+ ++... ...|+++|.+++
T Consensus 177 ~~d~---------------~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lw-va~~~---------~~~v~~~d~~tG 230 (297)
T 3g4e_A 177 DYDL---------------QTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LW-VACYN---------GGRVIRLDPVTG 230 (297)
T ss_dssp EECT---------------TTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EE-EEEET---------TTEEEEECTTTC
T ss_pred eccC---------------CCCcccCcEEEEECCCCCCCCCeeEECCCCC-EE-EEEcC---------CCEEEEEcCCCc
Confidence 7620 22322 1 1222233456678999996 43 33221 236999998765
Q ss_pred CCCCcccceeeEEeeeeccCCCCCccccccCCCCCccc-cCCCEEEEEEEeC
Q 003886 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWG 465 (789)
Q Consensus 415 ~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws-~Dg~~l~~~~~~~ 465 (789)
+... .+. .+. ..+..++|. ||+++||+++...
T Consensus 231 ~~~~-------~i~---~p~---------~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 231 KRLQ-------TVK---LPV---------DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CEEE-------EEE---CSS---------SBEEEEEEESGGGCEEEEEEBCT
T ss_pred eEEE-------EEE---CCC---------CCceEEEEeCCCCCEEEEEcCCc
Confidence 4321 111 110 012356787 8999998887654
No 432
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.44 E-value=1.2e-05 Score=83.51 Aligned_cols=166 Identities=11% Similarity=0.057 Sum_probs=84.9
Q ss_pred cEEEEeCC---CCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCC
Q 003886 156 ASAVVPSP---SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (789)
Q Consensus 156 ~~~~~~SP---dG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~ 230 (789)
+...+||| ||+.||-.+.++ .+.+| .+|+..+.+......... ....+|||||+.++..+.+..
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D~-----TIkIWDl~TGk~l~tL~g~~~~v~~------v~~vafSpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIMN-----NIVIWNLKTGQLLKKMHIDDSYQAS------VCHKAYSEMGLLFIVLSHPCA 249 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETTS-----EEEEEETTTCCEEEEEECCC---CC------CEEEEEEETTEEEEEEC----
T ss_pred eeeEEeeccCCCCceEEEecCCC-----cEEEEECCCCcEEEEEcCCCcceee------eEEEEECCCCCEEEEeccCCC
Confidence 44455555 445555444433 67788 456655555421110001 135689999998887654321
Q ss_pred CCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEecc--CCCCCCccceEEEeeCCCC
Q 003886 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK--GIPKSLSVGQVVWAPLNEG 308 (789)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~--~~~~~~~~~~~~wSPDg~~ 308 (789)
. | ...++..+..|.+||+.+|+...+. ..+..........+.+|..
T Consensus 250 ~----w----------------------------~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~ 297 (356)
T 2w18_A 250 K----E----------------------------SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHC 297 (356)
T ss_dssp ----------------------------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTE
T ss_pred c----c----------------------------eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCE
Confidence 0 0 0112335678899999998764331 0010100011112222333
Q ss_pred CccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCCCCccC-cceecCCCCEE
Q 003886 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAF-FPRFSPDGKFL 386 (789)
Q Consensus 309 ~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~-~p~~SpDG~~l 386 (789)
++-.+ .+..|.++|+ .+++ ...|+.+..... ..+|||||++|
T Consensus 298 ----lASgS---------------~DgTIkIWDl-----------------~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 298 ----AAAIL---------------TSGTIAIWDL-----------------LLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp ----EEEEE---------------TTSCEEEEET-----------------TTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred ----EEEEc---------------CCCcEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 33322 2336888998 5555 456766654444 47999999999
Q ss_pred EEEecCCCCCCCCccccceeEEeec
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDW 411 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~ 411 (789)
+..+.+. .|++||.
T Consensus 342 aSGS~D~-----------TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDG-----------NIFVYHY 355 (356)
T ss_dssp EEECTTS-----------CEEEEEE
T ss_pred EEEECCC-----------cEEEecC
Confidence 8776543 4788874
No 433
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.39 E-value=4e-05 Score=84.31 Aligned_cols=296 Identities=10% Similarity=-0.006 Sum_probs=150.4
Q ss_pred ceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccc
Q 003886 125 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 202 (789)
Q Consensus 125 ~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g 202 (789)
..+.+.++++.+ +.....+.... +.+....|+ ++.|+..+..+ .+.+| ..++....+. ...+
T Consensus 137 ~dg~i~vwd~~~-~~~~~~~~~h~-----~~v~~~~~~--~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~---~h~~ 200 (445)
T 2ovr_B 137 DDNTLKVWSAVT-GKCLRTLVGHT-----GGVWSSQMR--DNIIISGSTDR-----TLKVWNAETGECIHTLY---GHTS 200 (445)
T ss_dssp TTSCEEEEETTT-CCEEEECCCCS-----SCEEEEEEE--TTEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSS
T ss_pred CCCcEEEEECCC-CcEEEEEcCCC-----CCEEEEEec--CCEEEEEeCCC-----eEEEEECCcCcEEEEEC---CCCC
Confidence 445666776532 22222232222 457777887 56777665543 35566 3444333332 1112
Q ss_pred cccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccC
Q 003886 203 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 282 (789)
Q Consensus 203 ~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~ 282 (789)
.| ..+.|+ ++.|+..+.+.... .|+............+........| +....+++..+..|.+||+.+
T Consensus 201 ~v------~~~~~~--~~~l~s~s~dg~i~--~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 201 TV------RCMHLH--EKRVVSGSRDATLR--VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp CE------EEEEEE--TTEEEEEETTSEEE--EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGG
T ss_pred cE------EEEEec--CCEEEEEeCCCEEE--EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCC
Confidence 22 566664 56677766554322 2332211111111122222222233 323344555678899999998
Q ss_pred CceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC
Q 003886 283 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 362 (789)
Q Consensus 283 g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 362 (789)
++..... ......+..+.| |++. |+..+ .+..|.++|+ .++
T Consensus 269 ~~~~~~~-~~~~~~v~~~~~--~~~~----l~~~~---------------~d~~i~i~d~-----------------~~~ 309 (445)
T 2ovr_B 269 ETCLHTL-QGHTNRVYSLQF--DGIH----VVSGS---------------LDTSIRVWDV-----------------ETG 309 (445)
T ss_dssp TEEEEEE-CCCSSCEEEEEE--CSSE----EEEEE---------------TTSCEEEEET-----------------TTC
T ss_pred CcEeEEe-cCCCCceEEEEE--CCCE----EEEEe---------------CCCeEEEEEC-----------------CCC
Confidence 8755431 122334556666 7776 66554 2336888887 333
Q ss_pred C-eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccc
Q 003886 363 P-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 441 (789)
Q Consensus 363 ~-~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~ 441 (789)
+ ...+..+..... .++++|+.|+..+.+. .|.+||+.++..... ......
T Consensus 310 ~~~~~~~~~~~~v~--~~~~~~~~l~~~~~dg-----------~i~vwd~~~~~~~~~----------~~~~~~------ 360 (445)
T 2ovr_B 310 NCIHTLTGHQSLTS--GMELKDNILVSGNADS-----------TVKIWDIKTGQCLQT----------LQGPNK------ 360 (445)
T ss_dssp CEEEEECCCCSCEE--EEEEETTEEEEEETTS-----------CEEEEETTTCCEEEE----------ECSTTS------
T ss_pred CEEEEEcCCcccEE--EEEEeCCEEEEEeCCC-----------eEEEEECCCCcEEEE----------EccCCC------
Confidence 3 445554444333 4555788777666442 599999876543211 000000
Q ss_pred cccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec------CCCCCceeEEeeecCCEEEEEEeCCCCCCeE
Q 003886 442 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT------PAESNFSWSLLTLDGDNIIAVSSSPVDVPQV 515 (789)
Q Consensus 442 ~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt------~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i 515 (789)
....+..+.| +++. ++++..++...+ +|+.+|+..+.. ...+.+....+++++..++....+...+..+
T Consensus 361 ~~~~v~~~~~--~~~~-l~s~~~dg~v~i--wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l 435 (445)
T 2ovr_B 361 HQSAVTCLQF--NKNF-VITSSDDGTVKL--WDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 435 (445)
T ss_dssp CSSCEEEEEE--CSSE-EEEEETTSEEEE--EETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred CCCCEEEEEE--CCCE-EEEEeCCCeEEE--EECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEE
Confidence 0011233445 4554 455555665444 577788765433 1122334456777766555555555556778
Q ss_pred EEEeec
Q 003886 516 KYGYFV 521 (789)
Q Consensus 516 ~~~~~~ 521 (789)
++.|..
T Consensus 436 ~v~df~ 441 (445)
T 2ovr_B 436 LVLDFD 441 (445)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887764
No 434
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.38 E-value=2e-05 Score=82.03 Aligned_cols=227 Identities=10% Similarity=0.019 Sum_probs=109.7
Q ss_pred cccEEEEeCCC----CCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEee
Q 003886 154 TGASAVVPSPS----GSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (789)
Q Consensus 154 ~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~ 227 (789)
..+...++||| |++++.... ...+| .++ +.+.....+. |..+..+.+||||+.++-...
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~-------~~~v~~l~~g--~lv~ss~~g~------d~~V~~~~~s~dG~~~~s~~~ 176 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGN-------IKAVLGLTKR--RLVSSSGTLS------DQQVEVMTFAEDGGGKENQFL 176 (356)
T ss_dssp EEEEEECC------CCEEEEEEEE-------EEEEEEETTT--EEEEEESSST------TCEEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEECCCccccccEEEeCCC-------eEEEEecCCC--cEEEecccCC------CCcEEEEEECCCCceeeeecc
Confidence 45778889999 888876432 12333 222 2222211122 223377888999987664322
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeC--Cccccc-CCccCceEEEEEccCCceE-eccCCC-CCCccceEEE
Q 003886 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE--DWGETY-AGKRQPSLFVININSGEVQ-AVKGIP-KSLSVGQVVW 302 (789)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~g~~~-~~~~~~~l~v~d~~~g~~~-~l~~~~-~~~~~~~~~w 302 (789)
... ......|++ +-++.+ ++..+..|.+||+++|+.. .+.+.. ....+...+|
T Consensus 177 ~~~----------------------~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 177 MPP----------------------EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp CCC----------------------SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCC----------------------ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 111 111122333 112222 3346789999999999854 442111 1124456689
Q ss_pred eeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeee-cC-----CCCCccCc
Q 003886 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-LT-----ESISSAFF 376 (789)
Q Consensus 303 SPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-Lt-----~~~~~~~~ 376 (789)
||||+. ++..+..... .-. ..-.....|.++|. .++.... +. .+.....
T Consensus 235 SpdG~~----lvs~s~~~~~--w~l-aSGs~D~tIklWd~-----------------~tgk~l~v~~~~~p~Gh~~~~l- 289 (356)
T 2w18_A 235 SEMGLL----FIVLSHPCAK--ESE-SLRSPVFQLIVINP-----------------KTTLSVGVMLYCLPPGQAGRFL- 289 (356)
T ss_dssp EETTEE----EEEEC---------------CCEEEEEEET-----------------TTTEEEEEEEECCCTTCCCCEE-
T ss_pred CCCCCE----EEEeccCCCc--cee-eccCCCcEEEEEEC-----------------CCCEEEEEEEeeccCCCcceeE-
Confidence 999987 7655431110 000 00012335666776 4444321 10 1111111
Q ss_pred ceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCC
Q 003886 377 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 456 (789)
Q Consensus 377 p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~ 456 (789)
..+.+|..++-.+.+. .|.+||+.+++......+..+ .-...+.|+|||+
T Consensus 290 -sg~~sg~~lASgS~Dg-----------TIkIWDl~tGk~l~tL~gH~~------------------~vvs~vafSPDG~ 339 (356)
T 2w18_A 290 -EGDVKDHCAAAILTSG-----------TIAIWDLLLGQCTALLPPVSD------------------QHWSFVKWSGTDS 339 (356)
T ss_dssp -EEEEETTEEEEEETTS-----------CEEEEETTTCSEEEEECCC--------------------CCCCEEEECSSSS
T ss_pred -ccccCCCEEEEEcCCC-----------cEEEEECCCCcEEEEecCCCC------------------CeEEEEEECCCCC
Confidence 2222355555544332 599999988765321111100 0112357999999
Q ss_pred EEEEEEEeCCeEEEEEE
Q 003886 457 TMLLSSIWGSSQVIISV 473 (789)
Q Consensus 457 ~l~~~~~~~~~~~l~~~ 473 (789)
+| +++..++..+||.+
T Consensus 340 ~L-aSGS~D~TIklWd~ 355 (356)
T 2w18_A 340 HL-LAGQKDGNIFVYHY 355 (356)
T ss_dssp EE-EEECTTSCEEEEEE
T ss_pred EE-EEEECCCcEEEecC
Confidence 65 67777788888753
No 435
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.36 E-value=2e-06 Score=86.58 Aligned_cols=92 Identities=8% Similarity=-0.007 Sum_probs=66.4
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (789)
..|.||++||.+++ ...|......|. .+|.|+.+|++| ++. ..+++.+.++.+. ..
T Consensus 21 ~~~~l~~~hg~~~~--~~~~~~~~~~l~-~~~~v~~~d~~g---~~~-------------~~~~~~~~i~~~~-----~~ 76 (244)
T 2cb9_A 21 GGKNLFCFPPISGF--GIYFKDLALQLN-HKAAVYGFHFIE---EDS-------------RIEQYVSRITEIQ-----PE 76 (244)
T ss_dssp CSSEEEEECCTTCC--GGGGHHHHHHTT-TTSEEEEECCCC---STT-------------HHHHHHHHHHHHC-----SS
T ss_pred CCCCEEEECCCCCC--HHHHHHHHHHhC-CCceEEEEcCCC---HHH-------------HHHHHHHHHHHhC-----CC
Confidence 45778999997664 456766666665 689999999987 211 1445555554431 23
Q ss_pred ccEEEEEcCccHHHHHHHHHhC---CCceeEEEEeCCcc
Q 003886 671 SKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLC 706 (789)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~~~~~---p~~~~a~v~~~pv~ 706 (789)
.++.++|||+||.++..++.+. +++++++|+.++..
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~ 115 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYK 115 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCC
Confidence 5799999999999999988764 57889888887654
No 436
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.35 E-value=8.2e-05 Score=77.24 Aligned_cols=196 Identities=10% Similarity=0.027 Sum_probs=101.8
Q ss_pred eEEEEEccCCceEec-cCCCC---CCccceEEEeeCCCCCccEEEEEeecCCceeeeee-eeccCCcceEEEecccccch
Q 003886 274 SLFVININSGEVQAV-KGIPK---SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK-YCYNRPCALYAVRVSLYKSE 348 (789)
Q Consensus 274 ~l~v~d~~~g~~~~l-~~~~~---~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~-~~~~~~~~l~~~d~~~~~~~ 348 (789)
.|+++|.+ |+.+.+ ..... ...+..++++|||+ |+++..........+. ........||+++.
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-----l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~------ 160 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-----LWITAPAGEVAPADYTRSMQEKFGSIYCFTT------ 160 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-----EEEEECBCBCTTSCCCBTTSSSCEEEEEECT------
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-----EEEEecCcccccccccccccCCCCeEEEECC------
Confidence 68899988 777655 31111 12467889999986 6665432100000000 00011236888886
Q ss_pred hhhhhhhcCCCCCCCeeecCCCCCccCcceec----CCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCccccee
Q 003886 349 ASELELKESSSEDLPVVNLTESISSAFFPRFS----PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 424 (789)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~S----pDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~ 424 (789)
+ ++.+.+..........+|+ |||+.|++..... ..|+++|....+.. . ..
T Consensus 161 -----------~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~----------~~i~~~~~~~~g~~--~--~~ 214 (314)
T 1pjx_A 161 -----------D-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT----------KKLWSYDIKGPAKI--E--NK 214 (314)
T ss_dssp -----------T-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT----------TEEEEEEEEETTEE--E--EE
T ss_pred -----------C-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCC----------CeEEEEECCCCCcc--c--cc
Confidence 4 4444443333334567899 9998776654322 36899987521110 0 00
Q ss_pred eEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcE-EEecCCCCCceeEEeeecCCEEE
Q 003886 425 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNII 503 (789)
Q Consensus 425 ~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~-~~lt~~~~~~~~~~~s~dg~~l~ 503 (789)
.+.. ..+... + .....+.+++||+ |++..... ..|+++|.++|+. ..+...........++++|+.|+
T Consensus 215 ~~~~--~~~~~~-~-----~~p~~i~~d~~G~-l~v~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 215 KVWG--HIPGTH-E-----GGADGMDFDEDNN-LLVANWGS--SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp EEEE--ECCCCS-S-----CEEEEEEEBTTCC-EEEEEETT--TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEE
T ss_pred eEEE--ECCCCC-C-----CCCCceEECCCCC-EEEEEcCC--CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEE
Confidence 0110 000000 0 0123467888986 66654333 3678889876654 33332222334456678888776
Q ss_pred EEEeCCCCCCeEEEEeec
Q 003886 504 AVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 504 ~~~ss~~~p~~i~~~~~~ 521 (789)
+..... ..|+++++.
T Consensus 284 v~~~~~---~~l~~~~~~ 298 (314)
T 1pjx_A 284 VTEHEN---NAVWKFEWQ 298 (314)
T ss_dssp EEETTT---TEEEEEECS
T ss_pred EEeCCC---CeEEEEeCC
Confidence 665433 457777764
No 437
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.34 E-value=9.5e-06 Score=89.18 Aligned_cols=95 Identities=14% Similarity=0.079 Sum_probs=58.7
Q ss_pred CceEEEEEccCC-----ce----EeccCCC-CCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEe
Q 003886 272 QPSLFVININSG-----EV----QAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVR 341 (789)
Q Consensus 272 ~~~l~v~d~~~g-----~~----~~l~~~~-~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d 341 (789)
+..|.+||+.++ +. ..+.... ....+..++|+|++.. ++.++. .+..|.++|
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~----~las~s--------------~Dg~v~iwD 178 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPS----MVAVCL--------------ADGSIAVLQ 178 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTT----EEEEEE--------------TTSCEEEEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCC----EEEEEE--------------CCCeEEEEE
Confidence 367889998764 11 0111011 2346789999999544 454442 223688888
Q ss_pred cccccchhhhhhhhcCCCCCCCe-eecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecC
Q 003886 342 VSLYKSEASELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (789)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~-~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~ 412 (789)
+ .++.. .....+...+...+|||||++|+..+.+. .|.+||..
T Consensus 179 ~-----------------~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg-----------~v~iwd~~ 222 (434)
T 2oit_A 179 V-----------------TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG-----------TVVQYLPT 222 (434)
T ss_dssp E-----------------SSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS-----------CEEEECTT
T ss_pred c-----------------CCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC-----------cEEEEccC
Confidence 7 33322 22223345678899999999998777543 58889876
No 438
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.33 E-value=2.3e-06 Score=90.45 Aligned_cols=103 Identities=12% Similarity=0.153 Sum_probs=72.1
Q ss_pred CCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHH-HHHHHHcCCCC
Q 003886 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLAN 669 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~-i~~l~~~~~~d 669 (789)
..|.|+++||++++ ...|......| ..+|.|+.+|++| +|.+... ...++++.+. ++.+.+. ..
T Consensus 100 ~~~~l~~lhg~~~~--~~~~~~l~~~L-~~~~~v~~~d~~g---~~~~~~~-------~~~~~~~a~~~~~~i~~~--~~ 164 (329)
T 3tej_A 100 NGPTLFCFHPASGF--AWQFSVLSRYL-DPQWSIIGIQSPR---PNGPMQT-------AANLDEVCEAHLATLLEQ--QP 164 (329)
T ss_dssp SSCEEEEECCTTSC--CGGGGGGGGTS-CTTCEEEEECCCT---TTSHHHH-------CSSHHHHHHHHHHHHHHH--CS
T ss_pred CCCcEEEEeCCccc--chHHHHHHHhc-CCCCeEEEeeCCC---CCCCCCC-------CCCHHHHHHHHHHHHHHh--CC
Confidence 45789999997664 45565555556 5679999999987 4443311 1234454443 3333332 23
Q ss_pred CccEEEEEcCccHHHHHHHHHh---CCCceeEEEEeCCccch
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQ---APDKFVAAAARNPLCNL 708 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~---~p~~~~a~v~~~pv~~~ 708 (789)
..++.++|||+||.++..++.+ ++++++.+|+..+....
T Consensus 165 ~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~ 206 (329)
T 3tej_A 165 HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPE 206 (329)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTH
T ss_pred CCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCC
Confidence 4689999999999999999998 89999999998876543
No 439
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.28 E-value=2e-06 Score=93.15 Aligned_cols=101 Identities=14% Similarity=0.120 Sum_probs=66.4
Q ss_pred CCcEEEEEcCCCCCC------CchhhH----HHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHH-
Q 003886 591 CDPLIVVLHGGPHSV------SLSSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI- 659 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~------~~~~~~----~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i- 659 (789)
..|.||++||..+.. ....|. .....|+++||.|+++|++| +|.+... ..++...+
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G---~G~S~~~----------~~~l~~~i~ 117 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSA---LASNHER----------AVELYYYLK 117 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SSCHHHH----------HHHHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCC---CCCCccc----------hHHhhhhhh
Confidence 456688999976531 123443 36778899999999999987 5544311 00111100
Q ss_pred -----------------------HHHHHcCCCC-CccEEEEEcCccHHHHHHHHHh------------------------
Q 003886 660 -----------------------DHVIDMGLAN-PSKVTVVGGSHGGFLTTHLIGQ------------------------ 691 (789)
Q Consensus 660 -----------------------~~l~~~~~~d-~~rv~l~G~S~GG~~a~~~~~~------------------------ 691 (789)
..+++. +. .+++.|+||||||.++..++..
T Consensus 118 ~g~g~sg~~~~~~~~~~~~a~dl~~ll~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~ 195 (431)
T 2hih_A 118 GGRVDYGAAHSEKYGHERYGKTYEGVLKD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFK 195 (431)
T ss_dssp CEEEECCHHHHHHHTCCSEEEEECCSCTT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHH
T ss_pred hccccccccccccCCHHHHHHHHHHHHHH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccc
Confidence 000111 12 3789999999999999998765
Q ss_pred --CCCceeEEEEeCCcc
Q 003886 692 --APDKFVAAAARNPLC 706 (789)
Q Consensus 692 --~p~~~~a~v~~~pv~ 706 (789)
+|++++.+|+.++..
T Consensus 196 g~~p~~V~slv~i~tP~ 212 (431)
T 2hih_A 196 GGQDNMVTSITTIATPH 212 (431)
T ss_dssp CCCCSCEEEEEEESCCT
T ss_pred cCcccceeEEEEECCCC
Confidence 688999999998753
No 440
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.27 E-value=4.4e-06 Score=87.76 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=64.4
Q ss_pred EEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCCCccE
Q 003886 594 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKV 673 (789)
Q Consensus 594 ~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv 673 (789)
.|+++||.........|......|. .+|.|+.+|++| +|.+... .. ......++++.+.+..++..- .+..++
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~-~~~~v~~~d~~G---~g~~~~~-~~-~~~~~~~~~~a~~~~~~i~~~-~~~~p~ 163 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPG---YGTGTGT-GT-ALLPADLDTALDAQARAILRA-AGDAPV 163 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTT---CCBC----CB-CCEESSHHHHHHHHHHHHHHH-HTTSCE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC-CCCceEEecCCC---CCCCccc-cc-CCCCCCHHHHHHHHHHHHHHh-cCCCCE
Confidence 7899997211113456666666665 689999999988 4432000 00 001223444443332222210 134679
Q ss_pred EEEEcCccHHHHHHHHHhC----CCceeEEEEeCCc
Q 003886 674 TVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPL 705 (789)
Q Consensus 674 ~l~G~S~GG~~a~~~~~~~----p~~~~a~v~~~pv 705 (789)
.++|||+||.++..+|.+. ++.++.+|+.++.
T Consensus 164 ~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~ 199 (319)
T 2hfk_A 164 VLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPY 199 (319)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCC
T ss_pred EEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCC
Confidence 9999999999999999875 4568999988764
No 441
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.27 E-value=6.7e-05 Score=75.58 Aligned_cols=181 Identities=18% Similarity=0.134 Sum_probs=105.5
Q ss_pred CceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 272 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
...|.++|+++|++..-...+. ......++++|+. |+...|. ...++++|.
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~----lyv~t~~--------------~~~v~viD~--------- 93 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEK----LYQVVWL--------------KNIGFIYDR--------- 93 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEETT--------------CSEEEEEET---------
T ss_pred CCEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCE----EEEEEec--------------CCEEEEEEC---------
Confidence 4789999999998765421222 2223345666776 6666542 237999997
Q ss_pred hhhhcCCCCCCC-eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeee
Q 003886 352 LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (789)
Q Consensus 352 ~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~ 430 (789)
++.+ ..++..+ ......+++||++|+ .++. ..+|+++|..+.+.. ..+.+-
T Consensus 94 --------~t~~v~~~i~~g--~~~g~glt~Dg~~l~-vs~g----------s~~l~viD~~t~~v~-------~~I~Vg 145 (266)
T 2iwa_A 94 --------RTLSNIKNFTHQ--MKDGWGLATDGKILY-GSDG----------TSILYEIDPHTFKLI-------KKHNVK 145 (266)
T ss_dssp --------TTTEEEEEEECC--SSSCCEEEECSSSEE-EECS----------SSEEEEECTTTCCEE-------EEEECE
T ss_pred --------CCCcEEEEEECC--CCCeEEEEECCCEEE-EECC----------CCeEEEEECCCCcEE-------EEEEEC
Confidence 4443 3444322 123456889999876 4532 247999998774432 111111
Q ss_pred eccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC--------------CCceeEEee
Q 003886 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLT 496 (789)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~--------------~~~~~~~~s 496 (789)
..+..-. .+..+.|. || +||+. .+. ...|.++|+++|++....... .......++
T Consensus 146 ~~~~p~~-------~~nele~~-dg-~lyvn-~~~-~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 146 YNGHRVI-------RLNELEYI-NG-EVWAN-IWQ-TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp ETTEECC-------CEEEEEEE-TT-EEEEE-ETT-SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred CCCcccc-------cceeEEEE-CC-EEEEe-cCC-CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 1100000 11234566 66 57644 333 347999999999876543221 122456889
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 497 LDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 497 ~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
+++++++.+.... +.++.+++...
T Consensus 215 ~~~~~lfVTgk~~---~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLW---PKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTC---SEEEEEEEEEC
T ss_pred CCCCEEEEECCCC---CeEEEEEEecc
Confidence 9999988887655 44888887643
No 442
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.24 E-value=0.00017 Score=72.97 Aligned_cols=175 Identities=5% Similarity=-0.042 Sum_probs=93.1
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (789)
..|+++|.+++....+. .........++++|||+ |+++.. ....|++++.
T Consensus 87 ~~i~~~d~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 136 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLP-FDGLNYPEGLAVDTQGA-----VYVADR--------------GNNRVVKLAA---------- 136 (270)
T ss_dssp TEEEEECTTCSCCEECC-CCSCSSEEEEEECTTCC-----EEEEEG--------------GGTEEEEECT----------
T ss_pred CEEEEEeCCCceEeeee-cCCcCCCcceEECCCCC-----EEEEEC--------------CCCEEEEEEC----------
Confidence 46888888877665542 12223566888999886 555431 1225888875
Q ss_pred hhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeee
Q 003886 353 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (789)
Q Consensus 353 ~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~ 431 (789)
.+....... .........+++|||+ |++.... ...|+++|..++........
T Consensus 137 -------~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~~~~~~~~~~~--------- 189 (270)
T 1rwi_B 137 -------GSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTD----------NNRVVKLEAESNNQVVLPFT--------- 189 (270)
T ss_dssp -------TCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGG----------GTEEEEECTTTCCEEECCCS---------
T ss_pred -------CCceeEeeccccCCCceeEEEeCCCC-EEEEECC----------CCEEEEEecCCCceEeeccc---------
Confidence 333222222 1223467789999998 4443322 24699999765432111000
Q ss_pred ccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC-CCceeEEeeecCCEEEEEEeCCC
Q 003886 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPV 510 (789)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~ss~~ 510 (789)
.+ .....+.+++|| .||++... ...|++++.++.....+.... .......++++|+ ++++.....
T Consensus 190 -----~~-----~~p~~i~~d~~g-~l~v~~~~--~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~ 255 (270)
T 1rwi_B 190 -----DI-----TAPWGIAVDEAG-TVYVTEHN--TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGND 255 (270)
T ss_dssp -----SC-----CSEEEEEECTTC-CEEEEETT--TSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGGT
T ss_pred -----CC-----CCceEEEECCCC-CEEEEECC--CCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC-EEEEECCCC
Confidence 00 012355778888 47665432 235777888666554443222 2223345566664 544444332
Q ss_pred CCCeEEEEeec
Q 003886 511 DVPQVKYGYFV 521 (789)
Q Consensus 511 ~p~~i~~~~~~ 521 (789)
.|.++++.
T Consensus 256 ---~v~~~~~~ 263 (270)
T 1rwi_B 256 ---RVVKLTSL 263 (270)
T ss_dssp ---EEEEECCC
T ss_pred ---EEEEEcCC
Confidence 35555543
No 443
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.18 E-value=0.00021 Score=77.06 Aligned_cols=178 Identities=11% Similarity=0.021 Sum_probs=106.1
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (789)
..|++++++++..+.+. ...-.....+++.+.+.. |+++-. ....|+++++
T Consensus 138 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----lY~~d~--------------~~~~I~~~~~---------- 188 (386)
T 3v65_B 138 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 188 (386)
T ss_dssp TEEEEEETTSCCEEEEE-CSSCSCCCCEEEETTTTE----EEEEET--------------TTTEEEECBT----------
T ss_pred CcEEEEecCCCCcEEEE-eCCCCCccEEEEEeCCCe----EEEEcC--------------CCCeEEEEeC----------
Confidence 57999999988766652 122224567888888876 766542 1236888887
Q ss_pred hhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeee
Q 003886 353 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (789)
Q Consensus 353 ~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~ 431 (789)
++...+.+. .........++.|++..|+|..... ..+|+++++++...+.+...
T Consensus 189 -------dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~--------- 243 (386)
T 3v65_B 189 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADT--------- 243 (386)
T ss_dssp -------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECS---------
T ss_pred -------CCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC---------CCEEEEEeCCCCCcEEEEEC---------
Confidence 444444433 3334456778999988888775321 25799999876443211100
Q ss_pred ccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCC
Q 003886 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 511 (789)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~ 511 (789)
.... ...++|++++++||++- .....|+++|++++..+.+...... .-..++.+++.++++...
T Consensus 244 ---~~~~-------PnGlavd~~~~~lY~aD--~~~~~I~~~d~dG~~~~~~~~~~~~-~P~giav~~~~ly~td~~--- 307 (386)
T 3v65_B 244 ---HLFW-------PNGLTIDYAGRRMYWVD--AKHHVIERANLDGSHRKAVISQGLP-HPFAITVFEDSLYWTDWH--- 307 (386)
T ss_dssp ---SCSC-------EEEEEEEGGGTEEEEEE--TTTTEEEEECTTSCSCEEEECSSCS-SEEEEEEETTEEEEEETT---
T ss_pred ---CCCC-------eeeEEEeCCCCEEEEEE--CCCCEEEEEeCCCCeeEEEEECCCC-CceEEEEECCEEEEeeCC---
Confidence 0011 23568998888898874 3445789999876655555432211 112344466677666532
Q ss_pred CCeEEEEee
Q 003886 512 VPQVKYGYF 520 (789)
Q Consensus 512 p~~i~~~~~ 520 (789)
-..|.+++.
T Consensus 308 ~~~V~~~~~ 316 (386)
T 3v65_B 308 TKSINSANK 316 (386)
T ss_dssp TTEEEEEET
T ss_pred CCeEEEEEC
Confidence 234666663
No 444
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.17 E-value=0.00032 Score=73.25 Aligned_cols=229 Identities=9% Similarity=-0.003 Sum_probs=130.5
Q ss_pred eEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCCC
Q 003886 167 KLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGS 245 (789)
Q Consensus 167 ~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 245 (789)
+|+|....+ +..++ ..++...+....... .++.|++++++|+++..
T Consensus 3 ~ll~~~~~~-----I~~i~~~~~~~~~~~~~~~~p----------~g~~~d~~~~~ly~~D~------------------ 49 (316)
T 1ijq_A 3 YLFFTNRHE-----VRKMTLDRSEYTSLIPNLRNV----------VALDTEVASNRIYWSDL------------------ 49 (316)
T ss_dssp EEEEECBSS-----EEEEETTSCCCEEEECSCSSE----------EEEEEETTTTEEEEEET------------------
T ss_pred EEEEECCCe-----EEEEECCCcceEehhcCCCce----------EEEEEEeCCCEEEEEEC------------------
Confidence 456654443 77777 444444443322222 58999999888877632
Q ss_pred CCcCCCCCCCcceeeCCcccccCCccCceEEEEEccC----CceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecC
Q 003886 246 SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS----GEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSS 320 (789)
Q Consensus 246 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~----g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~l~f~~~~~ 320 (789)
....|+++++++ ...+.+ .... .....+++.+.++. |+++-.
T Consensus 50 -------------------------~~~~I~~~~~~g~~~~~~~~~~--~~~~~~~p~glavd~~~~~----ly~~d~-- 96 (316)
T 1ijq_A 50 -------------------------SQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSN----IYWTDS-- 96 (316)
T ss_dssp -------------------------TTTEEEEEEC--------CEEE--ECSSCSCCCEEEEETTTTE----EEEEET--
T ss_pred -------------------------CCCcEEEEECCCCCCCcccEEE--EeCCCCCcCEEEEeecCCe----EEEEEC--
Confidence 235788898876 333333 2222 24567888887776 666531
Q ss_pred CceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCC-CCCccCcceecCCCCEEEEEecCCCCCCCC
Q 003886 321 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGA 399 (789)
Q Consensus 321 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~la~~s~~~~~~~g~ 399 (789)
....|.++++ ++...+.+.. ........++.|++..|+|.....
T Consensus 97 ------------~~~~I~~~~~-----------------~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~------ 141 (316)
T 1ijq_A 97 ------------VLGTVSVADT-----------------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------ 141 (316)
T ss_dssp ------------TTTEEEEEET-----------------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS------
T ss_pred ------------CCCEEEEEeC-----------------CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC------
Confidence 1236888887 5544444432 334456778999888888775321
Q ss_pred ccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc
Q 003886 400 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 479 (789)
Q Consensus 400 ~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~ 479 (789)
..+|++++.++...+.+ .. . .... ...++|++++++||++- .....|+++|++++.
T Consensus 142 ---~~~I~~~~~dG~~~~~~-------~~---~--~~~~-------P~gla~d~~~~~lY~~D--~~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 142 ---PAKIKKGGLNGVDIYSL-------VT---E--NIQW-------PNGITLDLLSGRLYWVD--SKLHSISSIDVNGGN 197 (316)
T ss_dssp ---SCEEEEEETTSCCEEEE-------EC---S--SCSC-------EEEEEEETTTTEEEEEE--TTTTEEEEEETTSCS
T ss_pred ---CCeEEEEcCCCCCeEEE-------EE---C--CCCC-------ceEEEEeccCCEEEEEE--CCCCeEEEEecCCCc
Confidence 24799998865332111 00 0 0011 23567999999898864 334578999998766
Q ss_pred EEEecCCC-CCceeEEeeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003886 480 LLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 480 ~~~lt~~~-~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~~ 523 (789)
.+.+.... ....-..++.+++.++++... -..|++++..++
T Consensus 198 ~~~~~~~~~~~~~P~giav~~~~ly~~d~~---~~~V~~~~~~~g 239 (316)
T 1ijq_A 198 RKTILEDEKRLAHPFSLAVFEDKVFWTDII---NEAIFSANRLTG 239 (316)
T ss_dssp CEEEEECTTTTSSEEEEEEETTEEEEEETT---TTEEEEEETTTC
T ss_pred eEEEeecCCccCCcEEEEEECCEEEEEECC---CCeEEEEeCCCC
Confidence 65554321 111112344466777766533 245777775433
No 445
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.16 E-value=5.8e-06 Score=88.21 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=65.4
Q ss_pred CCcEEEEEcCCCCCCCc-----hhhH----HHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHH
Q 003886 591 CDPLIVVLHGGPHSVSL-----SSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDH 661 (789)
Q Consensus 591 ~~P~vv~~HGg~~~~~~-----~~~~----~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~ 661 (789)
..|.||++||..+.... ..|. ...+.|+++||.|+++|++| +|.... ...++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g---~G~s~~----------~a~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP---LSSNWD----------RACEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SBCHHH----------HHHHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCC---CCCccc----------cHHHHHHHHHh
Confidence 34558899997654211 2343 23478999999999999987 444321 01222222221
Q ss_pred --------HHHc-----------C----CCCCccEEEEEcCccHHHHHHHHHh-------------------CC------
Q 003886 662 --------VIDM-----------G----LANPSKVTVVGGSHGGFLTTHLIGQ-------------------AP------ 693 (789)
Q Consensus 662 --------l~~~-----------~----~~d~~rv~l~G~S~GG~~a~~~~~~-------------------~p------ 693 (789)
+.+. . ....+++.|+||||||.++..++.+ +|
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~ 151 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH 151 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccc
Confidence 1000 0 0245789999999999999998872 35
Q ss_pred CceeEEEEeCCcc
Q 003886 694 DKFVAAAARNPLC 706 (789)
Q Consensus 694 ~~~~a~v~~~pv~ 706 (789)
++++.+|..++..
T Consensus 152 ~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 152 HFVLSVTTIATPH 164 (387)
T ss_dssp CCEEEEEEESCCT
T ss_pred cceeEEEEECCCC
Confidence 7899999988643
No 446
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.16 E-value=0.00044 Score=73.36 Aligned_cols=178 Identities=11% Similarity=0.008 Sum_probs=105.6
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (789)
..|++++++++..+.+. ..+-.....+++.+.+.. |+++-. ....|+++++
T Consensus 95 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~---------- 145 (349)
T 3v64_C 95 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 145 (349)
T ss_dssp TEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET----------
T ss_pred CceEEEecCCCCceEEE-eCCCCCccEEEEecCCCe----EEEEcC--------------CCCeEEEEcC----------
Confidence 57999999888766552 122234567888888876 776642 1236889987
Q ss_pred hhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeee
Q 003886 353 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (789)
Q Consensus 353 ~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~ 431 (789)
++...+.+. .........++.|++..|+|..... ..+|+++++++...+.+...
T Consensus 146 -------dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~--------- 200 (349)
T 3v64_C 146 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADT--------- 200 (349)
T ss_dssp -------TSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEESCCS---------
T ss_pred -------CCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC---------CCEEEEEeCCCCCcEEEEEC---------
Confidence 444444443 3334456778999888888776331 25799999876443222110
Q ss_pred ccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCC
Q 003886 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 511 (789)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~ 511 (789)
+.. ....++|++++++||++- .+...|+++|++++..+.+...... .-..++.+++.++++....
T Consensus 201 ---~~~-------~PnGla~d~~~~~lY~aD--~~~~~I~~~~~dG~~~~~~~~~~~~-~P~giav~~~~ly~td~~~-- 265 (349)
T 3v64_C 201 ---HLF-------WPNGLTIDYAGRRMYWVD--AKHHVIERANLDGSHRKAVISQGLP-HPFAITVFEDSLYWTDWHT-- 265 (349)
T ss_dssp ---SCS-------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCS-SEEEEEEETTEEEEEETTT--
T ss_pred ---CCC-------CcceEEEeCCCCEEEEEE--CCCCEEEEEeCCCCceEEEEeCCCC-CceEEEEECCEEEEecCCC--
Confidence 001 123568999888898874 3345789999877655554432211 1123333566666654332
Q ss_pred CCeEEEEee
Q 003886 512 VPQVKYGYF 520 (789)
Q Consensus 512 p~~i~~~~~ 520 (789)
..|.+++.
T Consensus 266 -~~V~~~~~ 273 (349)
T 3v64_C 266 -KSINSANK 273 (349)
T ss_dssp -TEEEEEET
T ss_pred -CeEEEEEc
Confidence 24666653
No 447
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.14 E-value=8e-05 Score=79.26 Aligned_cols=84 Identities=10% Similarity=-0.025 Sum_probs=50.4
Q ss_pred ceecCCCCEEEEEec-C-CCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccC
Q 003886 377 PRFSPDGKFLVFLSA-K-SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (789)
Q Consensus 377 p~~SpDG~~la~~s~-~-~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (789)
..++|||++|++... . .... + ....+.++|+.+.+.... +++-. ....+.|++|
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~-~---~~~~~~ViD~~t~~vv~~-------i~vg~-------------~p~gi~~s~D 324 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCL-A---AAENTSSVTASVGQTSGP-------ISNGH-------------DSDAIIAAQD 324 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTT-S---CEEEEEEEESSSCCEEEC-------CEEEE-------------EECEEEECCS
T ss_pred eEEcCCCCEEEEEeccccCccc-c---cCCCEEEEECCCCeEEEE-------EECCC-------------CcceEEECCC
Confidence 579999999876543 1 1000 0 012356999988654211 11000 1236689999
Q ss_pred CCEEEEEEEeCCeEEEEEEECCCCcEEEecC
Q 003886 455 GCTMLLSSIWGSSQVIISVNVSSGELLRITP 485 (789)
Q Consensus 455 g~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~ 485 (789)
|+++|++... +...|..+|+.++++..-.+
T Consensus 325 g~~l~va~~~-~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 325 GASDNYANSA-GTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp SSCEEEEEET-TTTEEEEEESSSCEEEEECC
T ss_pred CCEEEEEccC-CCCeEEEEECCCCcEEEEEE
Confidence 9988777552 23468888999998775544
No 448
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.13 E-value=0.0011 Score=68.83 Aligned_cols=228 Identities=12% Similarity=0.111 Sum_probs=118.9
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
...++|+|+|+ |+++... ...++.++..++........... .++.++|||+ | |++....
T Consensus 34 pegia~~~~g~-lyv~d~~---~~~I~~~d~~g~~~~~~~~~~~p----------~gia~~~dG~-l-~vad~~~----- 92 (306)
T 2p4o_A 34 LENLASAPDGT-IFVTNHE---VGEIVSITPDGNQQIHATVEGKV----------SGLAFTSNGD-L-VATGWNA----- 92 (306)
T ss_dssp EEEEEECTTSC-EEEEETT---TTEEEEECTTCCEEEEEECSSEE----------EEEEECTTSC-E-EEEEECT-----
T ss_pred cceEEECCCCC-EEEEeCC---CCeEEEECCCCceEEEEeCCCCc----------eeEEEcCCCc-E-EEEeccC-----
Confidence 45789999997 5444322 23577777555555554443333 6889999998 4 4433210
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEE
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 315 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f 315 (789)
....|+++|..+|+++.+...+.......++..+++ .+|
T Consensus 93 -----------------------------------~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~------~~~ 131 (306)
T 2p4o_A 93 -----------------------------------DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT------QYL 131 (306)
T ss_dssp -----------------------------------TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS------EEE
T ss_pred -----------------------------------CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC------cEE
Confidence 123588888888887665312221122233433433 233
Q ss_pred EeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC--Ceee----c-----CCCCCccCcceecCCCC
Q 003886 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVN----L-----TESISSAFFPRFSPDGK 384 (789)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~----L-----t~~~~~~~~p~~SpDG~ 384 (789)
++.. ....||++|. .++ .... + ......... ++|||+
T Consensus 132 v~d~-------------~~g~i~~~d~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~png--is~dg~ 179 (306)
T 2p4o_A 132 TADS-------------YRGAIWLIDV-----------------VQPSGSIWLEHPMLARSNSESVFPAANG--LKRFGN 179 (306)
T ss_dssp EEET-------------TTTEEEEEET-----------------TTTEEEEEEECGGGSCSSTTCCSCSEEE--EEEETT
T ss_pred EEEC-------------CCCeEEEEeC-----------------CCCcEeEEEECCccccccccCCCCcCCC--cCcCCC
Confidence 4421 1236888886 222 1110 0 011111112 389999
Q ss_pred EEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe
Q 003886 385 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 464 (789)
Q Consensus 385 ~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~ 464 (789)
+|++.... ..+|+++|+.+.+.. .. ..+.... .....+++++||+ ||++. .
T Consensus 180 ~lyv~d~~----------~~~I~~~~~~~~g~~--~~--~~~~~~~-------------~~P~gi~vd~dG~-l~va~-~ 230 (306)
T 2p4o_A 180 FLYVSNTE----------KMLLLRIPVDSTDKP--GE--PEIFVEQ-------------TNIDDFAFDVEGN-LYGAT-H 230 (306)
T ss_dssp EEEEEETT----------TTEEEEEEBCTTSCB--CC--CEEEEES-------------CCCSSEEEBTTCC-EEEEC-B
T ss_pred EEEEEeCC----------CCEEEEEEeCCCCCC--Cc--cEEEecc-------------CCCCCeEECCCCC-EEEEe-C
Confidence 88765533 247999998752211 10 1111100 0234678889996 65543 2
Q ss_pred CCeEEEEEEECCCCcEEEe---cCCCCCceeEEee---ecCCEEEEEEeC
Q 003886 465 GSSQVIISVNVSSGELLRI---TPAESNFSWSLLT---LDGDNIIAVSSS 508 (789)
Q Consensus 465 ~~~~~l~~~dl~tg~~~~l---t~~~~~~~~~~~s---~dg~~l~~~~ss 508 (789)
. ...|.+++.+ |+...+ ...........|. +|+++|+.+...
T Consensus 231 ~-~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 231 I-YNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp T-TCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred C-CCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 2 2357778874 666443 2111222334566 677888777654
No 449
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.12 E-value=0.00024 Score=77.96 Aligned_cols=264 Identities=14% Similarity=0.118 Sum_probs=138.4
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCcc
Q 003886 160 VPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 237 (789)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 237 (789)
.++++|++|+..+..+ .+.+|+ .++..+.+. +..+.| ..+.|+ ++.|+..+.+.... .|+
T Consensus 124 ~~~~~g~~l~sg~~dg-----~i~vwd~~~~~~~~~~~---~h~~~v------~~~~~~--~~~l~s~~~dg~i~--vwd 185 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDN-----TLKVWSAVTGKCLRTLV---GHTGGV------WSSQMR--DNIIISGSTDRTLK--VWN 185 (445)
T ss_dssp EEEEETTEEEEEETTS-----CEEEEETTTCCEEEECC---CCSSCE------EEEEEE--TTEEEEEETTSCEE--EEE
T ss_pred EEEEcCCEEEEEECCC-----cEEEEECCCCcEEEEEc---CCCCCE------EEEEec--CCEEEEEeCCCeEE--EEE
Confidence 5777899998876654 456663 344333222 222233 667776 55677666654322 233
Q ss_pred CCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEe
Q 003886 238 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 317 (789)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~ 317 (789)
............+........|.+ ...+++..+..|.+||+.+++..... ......+..+.| ||+. |+..+
T Consensus 186 ~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~~~ 256 (445)
T 2ovr_B 186 AETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY--DGRR----VVSGA 256 (445)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEE-ECCSSCEEEEEE--CSSC----EEEEE
T ss_pred CCcCcEEEEECCCCCcEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEE-cCCcccEEEEEE--CCCE----EEEEc
Confidence 222211111112222222233332 23445556789999999988765431 122334555666 7887 76665
Q ss_pred ecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCC
Q 003886 318 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDS 397 (789)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~ 397 (789)
.+..|.++|+. .......+..+...+....| ||+.|+..+.+.
T Consensus 257 ---------------~dg~i~iwd~~----------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~---- 299 (445)
T 2ovr_B 257 ---------------YDFMVKVWDPE----------------TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT---- 299 (445)
T ss_dssp ---------------TTSCEEEEEGG----------------GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTS----
T ss_pred ---------------CCCEEEEEECC----------------CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCC----
Confidence 23368888872 22334455555556666666 899887776543
Q ss_pred CCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCC
Q 003886 398 GAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 477 (789)
Q Consensus 398 g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~t 477 (789)
.|.+||+.++.......... .....++++++.+ +++..++... .+|+.+
T Consensus 300 -------~i~i~d~~~~~~~~~~~~~~---------------------~~v~~~~~~~~~l-~~~~~dg~i~--vwd~~~ 348 (445)
T 2ovr_B 300 -------SIRVWDVETGNCIHTLTGHQ---------------------SLTSGMELKDNIL-VSGNADSTVK--IWDIKT 348 (445)
T ss_dssp -------CEEEEETTTCCEEEEECCCC---------------------SCEEEEEEETTEE-EEEETTSCEE--EEETTT
T ss_pred -------eEEEEECCCCCEEEEEcCCc---------------------ccEEEEEEeCCEE-EEEeCCCeEE--EEECCC
Confidence 59999987754321100000 0111344567644 5555555544 457777
Q ss_pred CcEEEecCCC--CCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 478 GELLRITPAE--SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 478 g~~~~lt~~~--~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
++........ .......++.+++.++... .. ..+.+.++.+
T Consensus 349 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~-~d---g~v~iwd~~~ 391 (445)
T 2ovr_B 349 GQCLQTLQGPNKHQSAVTCLQFNKNFVITSS-DD---GTVKLWDLKT 391 (445)
T ss_dssp CCEEEEECSTTSCSSCEEEEEECSSEEEEEE-TT---SEEEEEETTT
T ss_pred CcEEEEEccCCCCCCCEEEEEECCCEEEEEe-CC---CeEEEEECCC
Confidence 7765443321 1122334555666544433 32 2366666554
No 450
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.11 E-value=0.00086 Score=70.33 Aligned_cols=116 Identities=11% Similarity=0.040 Sum_probs=61.1
Q ss_pred cCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcccc
Q 003886 374 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 453 (789)
Q Consensus 374 ~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~ 453 (789)
....+++||+..|++.... ..+|.++|..+++... .+..+... ..+..+.++|
T Consensus 198 p~gia~d~~~g~l~v~d~~----------~~~I~~~~~~~G~~~~----------~~~~~~~~-------~~~~~~~~~p 250 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE----------NGRIQCFKTDTKEFVR----------EIKHASFG-------RNVFAISYIP 250 (329)
T ss_dssp EEEEEEETTTTEEEEEETT----------TTEEEEEETTTCCEEE----------EECCTTTT-------TCEEEEEEET
T ss_pred CcEEEEECCCCEEEEEECC----------CCEEEEEECCCCcEEE----------EEeccccC-------CCcceeeecC
Confidence 5668899996666554432 2479999987544311 11000000 0122345666
Q ss_pred CCCEEEEEEE-----eCCeEEEEEEECCCCcEEEecC----CCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 454 DGCTMLLSSI-----WGSSQVIISVNVSSGELLRITP----AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 454 Dg~~l~~~~~-----~~~~~~l~~~dl~tg~~~~lt~----~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
| .++.... ......++.++..+|++..... .........++++| .++.+..... .|.++++..
T Consensus 251 -g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~---~I~~~~~~~ 322 (329)
T 3fvz_A 251 -G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTN---TVWKFTLTE 322 (329)
T ss_dssp -T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSC---CEEEEEEEE
T ss_pred -C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCC---EEEEEeCCc
Confidence 2 2322221 1223468888988888776532 11223445677777 5665554443 466666543
No 451
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.10 E-value=3.6e-05 Score=85.53 Aligned_cols=116 Identities=10% Similarity=0.050 Sum_probs=69.7
Q ss_pred cccEEEEeCC-----CCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceee-c-CCCCEEEEE
Q 003886 154 TGASAVVPSP-----SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISW-N-SDETLIAYV 225 (789)
Q Consensus 154 ~~~~~~~~SP-----dG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~w-S-pDg~~la~~ 225 (789)
+..-+|..|. ||++|.. .+. .+..+-+|+ +..+..+++.++.+.. ..++.+ + ||+++|+..
T Consensus 85 gd~hh~~~s~t~g~~DG~~lfV-nd~--~~~rVavIdl~t~~~~~ii~ip~g~~--------phg~~~~~~p~~~~v~~~ 153 (595)
T 1fwx_A 85 GDLHHVHMSFTEGKYDGRFLFM-NDK--ANTRVARVRCDVMKCDAILEIPNAKG--------IHGLRPQKWPRSNYVFCN 153 (595)
T ss_dssp CCBCCEEEEEETTEEEEEEEEE-EET--TTTEEEEEETTTTEEEEEEECSSCCS--------EEEEEECCSSBCSEEEEE
T ss_pred CCCCccccCCCCCCcCCCEEEE-EcC--CCCEEEEEECCCceEeeEEeCCCCCC--------CcceeeeecCCCcEEEEe
Confidence 4455688888 9998754 433 455788888 6678788777754320 146776 6 999998555
Q ss_pred eecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeC
Q 003886 226 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 305 (789)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPD 305 (789)
.+...+-. ..++.. +.++ ..+..+-++|.++.++..- ++-......+..|||
T Consensus 154 ~~~~~p~~--------~dg~~l-----------~~~~-------~~~~~vtvID~~t~~v~~q--I~Vgg~pd~~~~spd 205 (595)
T 1fwx_A 154 GEDETPLV--------NDGTNM-----------EDVA-------NYVNVFTAVDADKWEVAWQ--VLVSGNLDNCDADYE 205 (595)
T ss_dssp ECSCEESS--------CSSSST-----------TCGG-------GEEEEEEEEETTTTEEEEE--EEESSCCCCEEECSS
T ss_pred cccccccC--------CCCccc-----------cccc-------ccCceEEEEECCCCeEEEE--EEeCCCccceEECCC
Confidence 44321100 000000 1111 1346788999999876543 222224667889999
Q ss_pred CCC
Q 003886 306 NEG 308 (789)
Q Consensus 306 g~~ 308 (789)
|++
T Consensus 206 Gk~ 208 (595)
T 1fwx_A 206 GKW 208 (595)
T ss_dssp SSE
T ss_pred CCE
Confidence 996
No 452
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.07 E-value=0.00034 Score=73.99 Aligned_cols=109 Identities=10% Similarity=0.000 Sum_probs=56.3
Q ss_pred cCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccc-e-eeEEeeeeccCCCCCccccccCCCCCcc
Q 003886 374 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK-I-VDVIPVVQCAEGDCFPGLYSSSILSNPW 451 (789)
Q Consensus 374 ~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~-~-~~v~~~~~~~~~~~f~g~~~~~~~~~~w 451 (789)
....+|||||+.|++..... .+||.++........+... . ..+.. .. ... ....+++
T Consensus 197 ~~gia~s~dg~~ly~~~~~~----------~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g---~~g-------~pdgia~ 255 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHS----------TSMYRIKSADLSNLQLTDAELGSKIER-YS---EKP-------ICDGISI 255 (343)
T ss_dssp EEEEEECTTSCEEEEEESSC----------SEEEEEEHHHHTCTTCCHHHHHTTCEE-EE---ECC-------SCSCEEE
T ss_pred cceeEeccCCCEEEEEeCCC----------CeEEEEEHHHhcCCCCChhhhhcceEe-cc---cCC-------CCceEEE
Confidence 35689999999988876542 3688887531000000000 0 00000 00 000 1236788
Q ss_pred ccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC--CceeEEeeecCCEEEEEEe
Q 003886 452 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 452 s~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~--~~~~~~~s~dg~~l~~~~s 507 (789)
++||+ ||++... ...|+++|..+|+...+..... ......++++| .++++.+
T Consensus 256 d~~G~-l~va~~~--~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g-~l~v~~~ 309 (343)
T 2qe8_A 256 DKDHN-IYVGDLA--HSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG-YLYFDCN 309 (343)
T ss_dssp CTTCC-EEEEEGG--GTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS-CEEEEEC
T ss_pred CCCCC-EEEEccC--CCeEEEEECCCCCEEEEEECCceecCCeeEECCCC-cEEEEeC
Confidence 89986 6665432 3467888986677766654321 12334555554 4555544
No 453
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.06 E-value=0.00012 Score=73.73 Aligned_cols=204 Identities=9% Similarity=0.020 Sum_probs=115.1
Q ss_pred EEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCC
Q 003886 157 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (789)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~ 235 (789)
.-..|+||| + +|++....+...+..++ ..++..+.+.++... ....+.++|++|+....
T Consensus 24 ~Gl~~~~dg-~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~----------fgeGi~~~g~~lyv~t~-------- 83 (266)
T 2iwa_A 24 QGLVYAEND-T-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSY----------FGEGLTLLNEKLYQVVW-------- 83 (266)
T ss_dssp EEEEECSTT-E-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTC----------CEEEEEEETTEEEEEET--------
T ss_pred ccEEEeCCC-e-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCc----------ceEEEEEeCCEEEEEEe--------
Confidence 456899996 4 56665433556788899 678887777765433 22234445677665532
Q ss_pred ccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEE
Q 003886 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 315 (789)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f 315 (789)
....++++|.+++++..- ++.. .......++||++ ++
T Consensus 84 -----------------------------------~~~~v~viD~~t~~v~~~--i~~g-~~~g~glt~Dg~~----l~- 120 (266)
T 2iwa_A 84 -----------------------------------LKNIGFIYDRRTLSNIKN--FTHQ-MKDGWGLATDGKI----LY- 120 (266)
T ss_dssp -----------------------------------TCSEEEEEETTTTEEEEE--EECC-SSSCCEEEECSSS----EE-
T ss_pred -----------------------------------cCCEEEEEECCCCcEEEE--EECC-CCCeEEEEECCCE----EE-
Confidence 236899999999876543 2211 1234568899998 55
Q ss_pred EeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCCC--C---ccCcceecCCCCEEEEE
Q 003886 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI--S---SAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~--~---~~~~p~~SpDG~~la~~ 389 (789)
+++. ...|+.+|. ++.+ ...+.-+. . ......|. || .| |.
T Consensus 121 vs~g--------------s~~l~viD~-----------------~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~l-yv 166 (266)
T 2iwa_A 121 GSDG--------------TSILYEIDP-----------------HTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EV-WA 166 (266)
T ss_dssp EECS--------------SSEEEEECT-----------------TTCCEEEEEECEETTEECCCEEEEEEE-TT-EE-EE
T ss_pred EECC--------------CCeEEEEEC-----------------CCCcEEEEEEECCCCcccccceeEEEE-CC-EE-EE
Confidence 5532 237999997 4433 33333221 1 12344667 77 44 44
Q ss_pred ecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeecc-C--CCCCccccccCCCCCccccCCCEEEEEEEeCC
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA-E--GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~-~--~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (789)
..-. ...|.++|..+++... .+++-... . ....+. ...+..++|+||++++|++. ..
T Consensus 167 n~~~---------~~~V~vID~~tg~V~~-------~I~~~g~~~~~~~~~~~~--~~v~nGIa~~~~~~~lfVTg--k~ 226 (266)
T 2iwa_A 167 NIWQ---------TDCIARISAKDGTLLG-------WILLPNLRKKLIDEGFRD--IDVLNGIAWDQENKRIFVTG--KL 226 (266)
T ss_dssp EETT---------SSEEEEEETTTCCEEE-------EEECHHHHHHHHHTTCTT--CCCEEEEEEETTTTEEEEEE--TT
T ss_pred ecCC---------CCeEEEEECCCCcEEE-------EEECCCcccccccccccc--cCceEEEEEcCCCCEEEEEC--CC
Confidence 4321 3479999998866421 11110000 0 000000 00123678999999988765 34
Q ss_pred eEEEEEEECCC
Q 003886 467 SQVIISVNVSS 477 (789)
Q Consensus 467 ~~~l~~~dl~t 477 (789)
...|+.+++..
T Consensus 227 ~~~v~~i~l~~ 237 (266)
T 2iwa_A 227 WPKLFEIKLHL 237 (266)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEec
Confidence 45678887644
No 454
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.04 E-value=3.3e-05 Score=85.81 Aligned_cols=104 Identities=12% Similarity=0.098 Sum_probs=58.8
Q ss_pred ceEEEEEccC--Cce-EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchh
Q 003886 273 PSLFVININS--GEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 349 (789)
Q Consensus 273 ~~l~v~d~~~--g~~-~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 349 (789)
..+-|+|..+ +++ ... ++.......+.+||||++ +|+++... ..+.++|+.....
T Consensus 254 ~~V~VID~~~~~~~~~~~~--Ipvg~~PhGv~~sPDGk~-----v~V~~~~s-------------~~VsVid~~~~~~-- 311 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRY--IPIANNPHGCNMAPDKKH-----LCVAGKLS-------------PTVTVLDVTRFDA-- 311 (595)
T ss_dssp TTEEEEECSGGGCCSSEEE--EEEESSCCCEEECTTSSE-----EEEECTTS-------------SBEEEEEGGGHHH--
T ss_pred CcEEEEeCcccCCceeEEE--EecCCCceEEEEcCCCCE-----EEEeCCCC-------------CeEEEEECccccc--
Confidence 4589999987 543 323 344456778999999996 45553322 3688888731100
Q ss_pred hhhhhhcCC-CCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCC
Q 003886 350 SELELKESS-SEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (789)
Q Consensus 350 ~~~~~~~~~-~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~ 413 (789)
..+.+. .......++.-+ ......+|+||| . +|++..- .+++.+||+++
T Consensus 312 ---~~~~~l~~~~~v~~~v~vG-~gP~h~aF~~dG-~-aY~t~~l---------dsqV~kwdi~~ 361 (595)
T 1fwx_A 312 ---VFYENADPRSAVVAEPELG-LGPLHTAFDGRG-N-AYTSLFL---------DSQVVKWNIED 361 (595)
T ss_dssp ---HHHSCCCGGGGEEECCBCC-SCEEEEEECTTS-E-EEEEETT---------TTEEEEEEHHH
T ss_pred ---ccccccCcccceEEEcCCC-CCcceEEECCCC-e-EEEEEec---------CCcEEEEEhhH
Confidence 000000 000112233222 236778999999 4 6666542 25788899865
No 455
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.00 E-value=0.00093 Score=72.26 Aligned_cols=182 Identities=8% Similarity=-0.048 Sum_probs=105.9
Q ss_pred ceEEEEEccC----CceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccch
Q 003886 273 PSLFVININS----GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 348 (789)
Q Consensus 273 ~~l~v~d~~~----g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 348 (789)
..|+++++++ +....+. ...-.....+++.+.++. |+++-. ....|+++++
T Consensus 134 ~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~----lY~~d~--------------~~~~I~~~~~------ 188 (400)
T 3p5b_L 134 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 188 (400)
T ss_dssp TEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTE----EEEEET--------------TTTEEEEECT------
T ss_pred CeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCc----eEEEEC--------------CCCeEEEEeC------
Confidence 5688888876 2333331 112224567788877776 666532 1236888887
Q ss_pred hhhhhhhcCCCCCCCeeecCC-CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEE
Q 003886 349 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 427 (789)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~ 427 (789)
++...+.+.. ........++.|.+..|+|..... ...|+++++++...+.+...
T Consensus 189 -----------~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~~~~~----- 243 (400)
T 3p5b_L 189 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE----- 243 (400)
T ss_dssp -----------TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS---------SCCEEEEETTSCSCEEEECS-----
T ss_pred -----------CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC---------CCEEEEEeCCCCccEEEEEC-----
Confidence 5555554433 333456678999888888776322 24699999876443221110
Q ss_pred eeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC-CceeEEeeecCCEEEEEE
Q 003886 428 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 428 ~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~-~~~~~~~s~dg~~l~~~~ 506 (789)
.-. ....+++++++++||++- .....|+++|++++..+.+..... ...-..++.+++.++++.
T Consensus 244 -------~l~-------~P~glavd~~~~~lY~aD--~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 244 -------NIQ-------WPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp -------SCS-------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred -------CCC-------ceEEEEEEeCCCEEEEEE--CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 001 123567888889898873 344579999998776666644321 112235566788877776
Q ss_pred eCCCCCCeEEEEeeccc
Q 003886 507 SSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 507 ss~~~p~~i~~~~~~~~ 523 (789)
... ..|++++..++
T Consensus 308 ~~~---~~V~~~~~~~G 321 (400)
T 3p5b_L 308 IIN---EAIFSANRLTG 321 (400)
T ss_dssp SSS---CSEEEEESSSC
T ss_pred CCC---CeEEEEEcCCC
Confidence 433 34777774433
No 456
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.99 E-value=1.5e-05 Score=82.01 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=67.2
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
...|.||++||.+++ ...|......|. +.|+.+|+++.. ....++++.+.+..+++.- ..
T Consensus 22 ~~~~~l~~~hg~~~~--~~~~~~~~~~L~---~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~-~~ 81 (283)
T 3tjm_A 22 SSERPLFLVHPIEGS--TTVFHSLASRLS---IPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV-QP 81 (283)
T ss_dssp SSSCCEEEECCTTCC--SGGGHHHHHHCS---SCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTT-CC
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhcC---ceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHh-CC
Confidence 345678899997764 566776666665 899999996411 1223555555444444431 12
Q ss_pred CccEEEEEcCccHHHHHHHHHhC---CCcee---EEEEeCCcc
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQA---PDKFV---AAAARNPLC 706 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~---p~~~~---a~v~~~pv~ 706 (789)
..++.++|||+||.++..++.+. +++++ ++|+.++..
T Consensus 82 ~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 82 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp SSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 36899999999999999998865 77888 888887653
No 457
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.98 E-value=0.0016 Score=67.96 Aligned_cols=160 Identities=9% Similarity=0.022 Sum_probs=100.2
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCce-eEEEecC-CCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~-~~~~~~~-~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
......|.+.++.|+++... ...++.+. .++.. ..+.... ... .++++.+.+..|+++-.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~---~~~I~r~~~~g~~~~~~~~~~~l~~p----------~glavd~~~g~ly~~d~---- 98 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVS---EEAIKRTEFNKTESVQNVVVSGLLSP----------DGLACDWLGEKLYWTDS---- 98 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETT---TTEEEEEETTSSSCCCEEEEECCSCC----------CEEEEETTTTEEEEEET----
T ss_pred ccEEEEEEeCCCEEEEEECC---CCcEEEEEccCCCceEEEEcCCCCCc----------cEEEEEcCCCeEEEEEC----
Confidence 45678899988888776433 23577776 33322 2222211 122 57888887777776521
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (789)
....|.++++++...+.+. ...-.....++..|++..
T Consensus 99 ---------------------------------------~~~~I~~~~~dG~~~~~l~-~~~~~~P~giavdp~~g~--- 135 (318)
T 3sov_A 99 ---------------------------------------ETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGF--- 135 (318)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEEGGGTE---
T ss_pred ---------------------------------------CCCEEEEEECCCCcEEEEE-eCCCCCccEEEEeCCCCE---
Confidence 2357889998876655552 122234567889998776
Q ss_pred EEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec-CCCCCccCcceecCCCCEEEEEe
Q 003886 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 312 ~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L-t~~~~~~~~p~~SpDG~~la~~s 390 (789)
|+++-+. ....|+++++ ++...+.+ ..........+|+|+++.|+|..
T Consensus 136 -ly~td~~-------------~~~~I~r~~~-----------------dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 136 -MYWTDWG-------------EVPKIERAGM-----------------DGSSRFIIINSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp -EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEEecC-------------CCCEEEEEEc-----------------CCCCeEEEEECCCCCccEEEEeccCCEEEEEE
Confidence 6665432 1237999997 44444444 33344566789999999998876
Q ss_pred cCCCCCCCCccccceeEEeecCCCC
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
.. ...|+++|+++..
T Consensus 185 ~~----------~~~I~~~d~dG~~ 199 (318)
T 3sov_A 185 AK----------LNFIHKSNLDGTN 199 (318)
T ss_dssp TT----------TTEEEEEETTSCS
T ss_pred CC----------CCEEEEEcCCCCc
Confidence 43 2479999987644
No 458
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.97 E-value=0.00097 Score=70.63 Aligned_cols=160 Identities=9% Similarity=0.090 Sum_probs=103.8
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecC-CCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~-~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
.....++|+|.++.|+++... ...++.+. +++....+.... ... .++++.+.+..|+++..
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~---~~~I~r~~~~g~~~~~~~~~~~~~p----------~glavd~~~g~ly~~d~---- 135 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVT---LDRILRANLNGSNVEEVVSTGLESP----------GGLAVDWVHDKLYWTDS---- 135 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETTSCSCEEEECSSCSCC----------CEEEEETTTTEEEEEET----
T ss_pred CceEEEEEeccccEEEEEecc---CCceEEEecCCCCceEEEeCCCCCc----------cEEEEecCCCeEEEEcC----
Confidence 346788999999998776433 23577777 444444443321 112 57888888888877522
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~ 310 (789)
....|.++++++...+.+ .... .....+++.|++..
T Consensus 136 ---------------------------------------~~~~I~~~~~dG~~~~~l--~~~~l~~P~~iavdp~~g~-- 172 (349)
T 3v64_C 136 ---------------------------------------GTSRIEVANLDGAHRKVL--LWQSLEKPRAIALHPMEGT-- 172 (349)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEE--ECTTCSCEEEEEEETTTTE--
T ss_pred ---------------------------------------CCCeEEEEcCCCCceEEE--EeCCCCCcceEEEecCcCe--
Confidence 235789999887765555 2222 35668899998876
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCC-CCCccCcceecCCCCEEEEE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~la~~ 389 (789)
|+++-+.. ...|+++++ ++...+.+.. ........+|+|+++.|+|.
T Consensus 173 --ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 173 --IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp --EEEEECSS-------------SCEEEEEET-----------------TSCSCEESCCSSCSCEEEEEEETTTTEEEEE
T ss_pred --EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCcceEEEeCCCCEEEEE
Confidence 76664321 137999998 5544444432 33446678999999999887
Q ss_pred ecCCCCCCCCccccceeEEeecCCCC
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
... ...|+++|+++..
T Consensus 221 D~~----------~~~I~~~~~dG~~ 236 (349)
T 3v64_C 221 DAK----------HHVIERANLDGSH 236 (349)
T ss_dssp ETT----------TTEEEEEETTSCS
T ss_pred ECC----------CCEEEEEeCCCCc
Confidence 643 2479999987643
No 459
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.97 E-value=0.00094 Score=72.48 Aligned_cols=98 Identities=11% Similarity=0.213 Sum_probs=56.2
Q ss_pred EEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEE-ecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCc
Q 003886 159 VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEF-HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 236 (789)
Q Consensus 159 ~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~-~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 236 (789)
++|+|+|+.|++..... ...++.+. .++...+.. ...... .....+++++|++..|++. ..
T Consensus 176 ia~~~~g~~l~~~d~~~--~~~I~~~d~~~~~~~~~~g~~~~~~------~~~p~~iav~p~~g~lyv~-d~-------- 238 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEG--THTVYVYMKASGWAPTRIGQLGSTF------SGKIGAVALDETEEWLYFV-DS-------- 238 (409)
T ss_dssp CEECTTSSEEEEEBSST--TCEEEEEEGGGTTCEEEEEECCTTS------CSCCCBCEECTTSSEEEEE-CT--------
T ss_pred eeEecCCCcEEEEecCC--CceEEEEEcCCCceeEEeeeccchh------cCCcEEEEEeCCCCeEEEE-EC--------
Confidence 89999999877664432 22677777 333332222 111100 0112688999976667663 21
Q ss_pred cCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccC--CCCCC--ccc-eEEEeeCCCC
Q 003886 237 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSL--SVG-QVVWAPLNEG 308 (789)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~--~~~~~--~~~-~~~wSPDg~~ 308 (789)
...|+++|++++....+.+ ..... ... .++|+|++..
T Consensus 239 -----------------------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 239 -----------------------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp -----------------------------------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred -----------------------------------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 2478999998887654411 11111 123 8999997765
No 460
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.95 E-value=0.00057 Score=73.57 Aligned_cols=160 Identities=9% Similarity=0.071 Sum_probs=102.6
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-ceeEEEecCC-CccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-QLEKEFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~-~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
.....++|+|.++.|+++... ...|+.+...+ ..+.+..... .. .++++.+.+..|+++..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~---~~~I~r~~~~g~~~~~~~~~~~~~p----------~glavd~~~g~lY~~d~---- 178 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVT---LDRILRANLNGSNVEEVVSTGLESP----------GGLAVDWVHDKLYWTDS---- 178 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETTSCCEEEEECSSCSCC----------CCEEEETTTTEEEEEET----
T ss_pred CccEEEEEecCCCeEEEEeCC---CCcEEEEecCCCCcEEEEeCCCCCc----------cEEEEEeCCCeEEEEcC----
Confidence 356788999999998776433 23577777433 3333332211 12 57888888888877522
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~ 310 (789)
....|.++++++...+.+ .... .....++..|++..
T Consensus 179 ---------------------------------------~~~~I~~~~~dg~~~~~l--~~~~l~~P~giavdp~~g~-- 215 (386)
T 3v65_B 179 ---------------------------------------GTSRIEVANLDGAHRKVL--LWQSLEKPRAIALHPMEGT-- 215 (386)
T ss_dssp ---------------------------------------TTTEEEECBTTSCSCEEE--ECSSCSCEEEEEEETTTTE--
T ss_pred ---------------------------------------CCCeEEEEeCCCCceEEe--ecCCCCCCcEEEEEcCCCe--
Confidence 225788888877665555 2322 35667899998876
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~ 389 (789)
|+++-+.. ...|+++++ ++...+.+. .........+|+|+++.|+|.
T Consensus 216 --ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 216 --IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp --EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEEGGGTEEEEE
T ss_pred --EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCeeeEEEeCCCCEEEEE
Confidence 66664321 137999998 444444443 333446778999999999887
Q ss_pred ecCCCCCCCCccccceeEEeecCCCC
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
... ...|+++|+++..
T Consensus 264 D~~----------~~~I~~~d~dG~~ 279 (386)
T 3v65_B 264 DAK----------HHVIERANLDGSH 279 (386)
T ss_dssp ETT----------TTEEEEECTTSCS
T ss_pred ECC----------CCEEEEEeCCCCe
Confidence 643 2479999987643
No 461
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.90 E-value=0.0013 Score=71.87 Aligned_cols=222 Identities=15% Similarity=0.181 Sum_probs=123.4
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCcc
Q 003886 160 VPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 237 (789)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 237 (789)
.+++||++|+.....+ .+.+|+ .++....+. +..+.| ..+.| |++.|+..+.+
T Consensus 138 ~~~~d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~---~h~~~v------~~l~~--~~~~l~sg~~d--------- 192 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDN-----TIKIWDKNTLECKRILT---GHTGSV------LCLQY--DERVIITGSSD--------- 192 (435)
T ss_dssp EEECCSSEEEEEESSS-----CEEEEESSSCCEEEEEC---CCSSCE------EEEEC--CSSEEEEEETT---------
T ss_pred EEEECCCEEEEEeCCC-----eEEEEeCCCCeEEEEEc---CCCCcE------EEEEE--CCCEEEEEcCC---------
Confidence 4566999999876654 355663 444443332 122222 56666 88877765432
Q ss_pred CCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEe
Q 003886 238 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 317 (789)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~ 317 (789)
..|.+||+.+++..... ......+..+.|++ +. |+..+
T Consensus 193 -----------------------------------g~i~vwd~~~~~~~~~~-~~h~~~v~~l~~~~--~~----l~s~s 230 (435)
T 1p22_A 193 -----------------------------------STVRVWDVNTGEMLNTL-IHHCEAVLHLRFNN--GM----MVTCS 230 (435)
T ss_dssp -----------------------------------SCEEEEESSSCCEEEEE-CCCCSCEEEEECCT--TE----EEEEE
T ss_pred -----------------------------------CeEEEEECCCCcEEEEE-cCCCCcEEEEEEcC--CE----EEEee
Confidence 56899999988765431 22334566777763 34 55544
Q ss_pred ecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-e---eecCCCCCccCcceecCCCCEEEEEecCC
Q 003886 318 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-V---VNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (789)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~---~~Lt~~~~~~~~p~~SpDG~~la~~s~~~ 393 (789)
....|.++|+ .++. . ..+..+...+....| ||+.|+..+.+.
T Consensus 231 ---------------~dg~i~vwd~-----------------~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 231 ---------------KDRSIAVWDM-----------------ASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp ---------------TTSCEEEEEC-----------------SSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred ---------------CCCcEEEEeC-----------------CCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 2336888887 3222 2 345555555666666 888888776543
Q ss_pred CCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003886 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (789)
Q Consensus 394 ~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~ 473 (789)
.|.+||+.++......... ...+..+.| +++.+ +++..++. |..+
T Consensus 277 -----------~i~vwd~~~~~~~~~~~~~-------------------~~~v~~~~~--~~~~l-~~g~~dg~--i~iw 321 (435)
T 1p22_A 277 -----------TIKVWNTSTCEFVRTLNGH-------------------KRGIACLQY--RDRLV-VSGSSDNT--IRLW 321 (435)
T ss_dssp -----------EEEEEETTTCCEEEEEECC-------------------SSCEEEEEE--ETTEE-EEEETTSC--EEEE
T ss_pred -----------eEEEEECCcCcEEEEEcCC-------------------CCcEEEEEe--CCCEE-EEEeCCCe--EEEE
Confidence 5899998775432110000 001223334 56644 55555554 4455
Q ss_pred ECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003886 474 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 474 dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~~p~~i~~~~~~~ 522 (789)
|+.+++.......+.. ....++.+++.++.... .. .|.+.++..
T Consensus 322 d~~~~~~~~~~~~h~~-~v~~~~~~~~~l~sg~~-dg---~i~vwd~~~ 365 (435)
T 1p22_A 322 DIECGACLRVLEGHEE-LVRCIRFDNKRIVSGAY-DG---KIKVWDLVA 365 (435)
T ss_dssp ETTTCCEEEEECCCSS-CEEEEECCSSEEEEEET-TS---CEEEEEHHH
T ss_pred ECCCCCEEEEEeCCcC-cEEEEEecCCEEEEEeC-CC---cEEEEECCC
Confidence 7778876655444331 22345557766554443 32 366777654
No 462
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.89 E-value=0.0011 Score=67.75 Aligned_cols=176 Identities=15% Similarity=0.114 Sum_probs=88.3
Q ss_pred ceEEEEEccCCceE-eccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 273 PSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 273 ~~l~v~d~~~g~~~-~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
..|+.+|. +|+.. .+. .+....+..+.++|||+. |+..+. ....|+.++.
T Consensus 56 ~~V~~~d~-~G~~~W~~~-~~~~~~~~~~~~~~dG~~----lv~~~~--------------~~~~v~~vd~--------- 106 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIA-APAGCEMQTARILPDGNA----LVAWCG--------------HPSTILEVNM--------- 106 (276)
T ss_dssp SEEEEECT-TSCEEEEEE-CCTTCEEEEEEECTTSCE----EEEEES--------------TTEEEEEECT---------
T ss_pred CCEEEECC-CCCEEEEEc-CCCCccccccEECCCCCE----EEEecC--------------CCCEEEEEeC---------
Confidence 34777787 45433 332 222334567889999985 444331 0124666664
Q ss_pred hhhhcCCCCCCCeeecCC------CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceee
Q 003886 352 LELKESSSEDLPVVNLTE------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVD 425 (789)
Q Consensus 352 ~~~~~~~~~~~~~~~Lt~------~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~ 425 (789)
++..+..+.- ........++++||+.|+..... ..++.+|.+ |+.. +.
T Consensus 107 --------~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-----------~~v~~~d~~-G~~~------w~ 160 (276)
T 3no2_A 107 --------KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-----------SEVREIAPN-GQLL------NS 160 (276)
T ss_dssp --------TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT-----------TEEEEECTT-SCEE------EE
T ss_pred --------CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC-----------CEEEEECCC-CCEE------EE
Confidence 3332222211 01123345789999987644322 368999976 4432 11
Q ss_pred EEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC---CC-C---ceeEEeeec
Q 003886 426 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA---ES-N---FSWSLLTLD 498 (789)
Q Consensus 426 v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~---~~-~---~~~~~~s~d 498 (789)
. ... . ........++|+.++ ..... ..|+.+|.++|++..-... .+ . .......++
T Consensus 161 ~----~~~---~-------~~~~~~~~~~g~~~v-~~~~~--~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 161 V----KLS---G-------TPFSSAFLDNGDCLV-ACGDA--HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp E----ECS---S-------CCCEEEECTTSCEEE-ECBTT--SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTT
T ss_pred E----ECC---C-------CccceeEcCCCCEEE-EeCCC--CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCC
Confidence 0 000 0 122345667887554 33322 3589999988887543221 11 1 122234456
Q ss_pred CCEEEEEEeCCC------CCCeEEEEee
Q 003886 499 GDNIIAVSSSPV------DVPQVKYGYF 520 (789)
Q Consensus 499 g~~l~~~~ss~~------~p~~i~~~~~ 520 (789)
|+.++..+.+.. ...+++.++.
T Consensus 224 G~i~v~~~~g~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 224 GGLYICNWQGHDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp SCEEEEEECTTCTTGGGSCCCSEEEECT
T ss_pred CCEEEEeccCccccccccCCceEEEECC
Confidence 665555443332 3456666653
No 463
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.83 E-value=0.0027 Score=66.19 Aligned_cols=161 Identities=11% Similarity=0.102 Sum_probs=99.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----ceeEEEecC-CCccccccCCCcccceeecCCCCEEEEEee
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~-~~~~g~v~~d~~~~~~~wSpDg~~la~~~~ 227 (789)
.....++|+|+++.|+++... ...++.+...+ ....++... ... .++++.+.++.|+++..
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~---~~~I~~~~~~g~~~~~~~~~~~~~~~~~p----------~glavd~~~~~ly~~d~ 96 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLS---QRMICSTQLDRAHGVSSYDTVISRDIQAP----------DGLAVDWIHSNIYWTDS 96 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETT---TTEEEEEEC--------CEEEECSSCSCC----------CEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEECC---CCcEEEEECCCCCCCcccEEEEeCCCCCc----------CEEEEeecCCeEEEEEC
Confidence 456789999999998776543 23577777333 222222211 112 57888887777766522
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003886 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (789)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (789)
....|.++++++...+.+. ...-.....++..|++.
T Consensus 97 -------------------------------------------~~~~I~~~~~~g~~~~~~~-~~~~~~P~~iavdp~~g 132 (316)
T 1ijq_A 97 -------------------------------------------VLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHG 132 (316)
T ss_dssp -------------------------------------------TTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTT
T ss_pred -------------------------------------------CCCEEEEEeCCCCceEEEE-ECCCCCcceEEeCCCCC
Confidence 2357888998876665552 11223556788999887
Q ss_pred CCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecC-CCCCccCcceecCCCCEE
Q 003886 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFL 386 (789)
Q Consensus 308 ~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l 386 (789)
. |+++.+.. ...|+++++ ++...+.+. .........+|+|+++.|
T Consensus 133 ~----ly~~d~~~-------------~~~I~~~~~-----------------dG~~~~~~~~~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 133 F----MYWTDWGT-------------PAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp E----EEEEECSS-------------SCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTEE
T ss_pred E----EEEEccCC-------------CCeEEEEcC-----------------CCCCeEEEEECCCCCceEEEEeccCCEE
Confidence 6 66654211 136999997 444444442 233446678999999999
Q ss_pred EEEecCCCCCCCCccccceeEEeecCCCC
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
+|..... .+|+++|+++..
T Consensus 179 Y~~D~~~----------~~I~~~d~dg~~ 197 (316)
T 1ijq_A 179 YWVDSKL----------HSISSIDVNGGN 197 (316)
T ss_dssp EEEETTT----------TEEEEEETTSCS
T ss_pred EEEECCC----------CeEEEEecCCCc
Confidence 8876432 479999987633
No 464
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.82 E-value=0.00051 Score=75.14 Aligned_cols=221 Identities=10% Similarity=0.001 Sum_probs=115.6
Q ss_pred CCCceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe
Q 003886 106 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW 185 (789)
Q Consensus 106 pdg~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~ 185 (789)
+||+.++.. ...+.+.++++.+ +.....+.... +.+...+| ||+.|+.....+ .+.+|
T Consensus 141 ~d~~~l~~g---------~~dg~i~iwd~~~-~~~~~~~~~h~-----~~v~~l~~--~~~~l~sg~~dg-----~i~vw 198 (435)
T 1p22_A 141 YDDQKIVSG---------LRDNTIKIWDKNT-LECKRILTGHT-----GSVLCLQY--DERVIITGSSDS-----TVRVW 198 (435)
T ss_dssp CCSSEEEEE---------ESSSCEEEEESSS-CCEEEEECCCS-----SCEEEEEC--CSSEEEEEETTS-----CEEEE
T ss_pred ECCCEEEEE---------eCCCeEEEEeCCC-CeEEEEEcCCC-----CcEEEEEE--CCCEEEEEcCCC-----eEEEE
Confidence 466665443 2344566666532 22222232222 34666666 888888776543 35566
Q ss_pred --cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCccCCCCCCC---CCCcCCCCCCCcceee
Q 003886 186 --SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG---SSDKDCNSWKGQGDWE 260 (789)
Q Consensus 186 --~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 260 (789)
..++....+.. ..+.| ..+.|++ +.|+..+.+.... .|+....... .....+........|
T Consensus 199 d~~~~~~~~~~~~---h~~~v------~~l~~~~--~~l~s~s~dg~i~--vwd~~~~~~~~~~~~~~~~~~~v~~~~~- 264 (435)
T 1p22_A 199 DVNTGEMLNTLIH---HCEAV------LHLRFNN--GMMVTCSKDRSIA--VWDMASPTDITLRRVLVGHRAAVNVVDF- 264 (435)
T ss_dssp ESSSCCEEEEECC---CCSCE------EEEECCT--TEEEEEETTSCEE--EEECSSSSCCEEEEEECCCSSCEEEEEE-
T ss_pred ECCCCcEEEEEcC---CCCcE------EEEEEcC--CEEEEeeCCCcEE--EEeCCCCCCceeeeEecCCCCcEEEEEe-
Confidence 34444333321 11222 6777864 4666666554322 2332211111 111122222222333
Q ss_pred CCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEE
Q 003886 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (789)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (789)
+....+++..+..|.+||+.+++..... ......+..+.| +++. |+..+ .+..|.++
T Consensus 265 -~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~g~---------------~dg~i~iw 321 (435)
T 1p22_A 265 -DDKYIVSASGDRTIKVWNTSTCEFVRTL-NGHKRGIACLQY--RDRL----VVSGS---------------SDNTIRLW 321 (435)
T ss_dssp -ETTEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEE--ETTE----EEEEE---------------TTSCEEEE
T ss_pred -CCCEEEEEeCCCeEEEEECCcCcEEEEE-cCCCCcEEEEEe--CCCE----EEEEe---------------CCCeEEEE
Confidence 2233445556789999999988765431 122234455555 5554 55444 23368888
Q ss_pred ecccccchhhhhhhhcCCCCCC-CeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCC
Q 003886 341 RVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
|+ .++ ....+..+...+....| ||+.|+..+.+. .|.+||+.++.
T Consensus 322 d~-----------------~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg-----------~i~vwd~~~~~ 367 (435)
T 1p22_A 322 DI-----------------ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-----------KIKVWDLVAAL 367 (435)
T ss_dssp ET-----------------TTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS-----------CEEEEEHHHHT
T ss_pred EC-----------------CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCC-----------cEEEEECCCCC
Confidence 88 434 34556656666666666 888887776543 58999986544
No 465
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.81 E-value=0.00018 Score=79.22 Aligned_cols=111 Identities=17% Similarity=0.163 Sum_probs=76.1
Q ss_pred CCCcEEEEEcCCCCCCCchhhHH----HHHHHHHCCcEEEEEcCCCCCCCCchhh------c--cCCCCCCcccHHHHHH
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSK----SLAFLSSVGYSLLIVNYRGSLGFGEEAL------Q--SLPGKVGSQDVNDVLT 657 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~----~~~~la~~Gy~V~~~d~rGs~G~G~~~~------~--~~~~~~~~~~~~D~~~ 657 (789)
...|++|++-| -+. ...+.. ......+.|-.+|..++|= ||++.. + .+.-..-.+.++|++.
T Consensus 41 ~~gPIfl~~gG-Eg~--~~~~~~~~g~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~st~~~nL~yLt~eQALaD~a~ 114 (472)
T 4ebb_A 41 GEGPIFFYTGN-EGD--VWAFANNSAFVAELAAERGALLVFAEHRY---YGKSLPFGAQSTQRGHTELLTVEQALADFAE 114 (472)
T ss_dssp TTCCEEEEECC-SSC--HHHHHHHCHHHHHHHHHHTCEEEEECCTT---STTCCTTGGGGGSTTSCTTCSHHHHHHHHHH
T ss_pred CCCcEEEEECC-Ccc--ccccccCccHHHHHHHHhCCeEEEEeccc---ccCCcCCCCCCccccccccCCHHHHHHHHHH
Confidence 34788888844 322 222211 2233446788999999996 555532 1 1111122344788888
Q ss_pred HHHHHHHcCCCCCccEEEEEcCccHHHHHHHHHhCCCceeEEEEeCCcc
Q 003886 658 AIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (789)
Q Consensus 658 ~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~~~~~p~~~~a~v~~~pv~ 706 (789)
.++++...-.....+++++|+||||++++|+-.++|+.|.++++.+++.
T Consensus 115 fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 115 LLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 8888877644556799999999999999999999999999999887654
No 466
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.80 E-value=4.3e-05 Score=75.81 Aligned_cols=137 Identities=17% Similarity=0.169 Sum_probs=84.9
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCch-hhHHH----------------HHHHHHCCcEEEEEcCCCCC
Q 003886 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKS----------------LAFLSSVGYSLLIVNYRGSL 633 (789)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~----------------~~~la~~Gy~V~~~d~rGs~ 633 (789)
..+..+..|++...+ .....|+|++++|||++.... ..... ..-| .+-..|+.+|.+-..
T Consensus 29 ~~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW-~~~anvlfiDqPvGt 105 (255)
T 1whs_A 29 GAGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRW-NKVANVLFLDSPAGV 105 (255)
T ss_dssp TTTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCG-GGTSEEEEECCSTTS
T ss_pred CCCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccc-cccCCEEEEecCCCC
Confidence 356788888887642 345789999999999974332 11000 0011 122689999964336
Q ss_pred CCCchhhccCCCCCC-cccHHHHHHHHHHHHHc-CCCCCccEEEEEcCccHHHHHHHHHhC------CCceeEEEEeCCc
Q 003886 634 GFGEEALQSLPGKVG-SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPL 705 (789)
Q Consensus 634 G~G~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~~~~~------p~~~~a~v~~~pv 705 (789)
|+............+ ....+|+...++...++ +.....++.|+|.||||..+..+|..- .-.++++++.+|+
T Consensus 106 GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~ 185 (255)
T 1whs_A 106 GFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGL 185 (255)
T ss_dssp TTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEEC
T ss_pred ccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCc
Confidence 665433211000111 22356666666655553 445567899999999999888776531 2368999999999
Q ss_pred cchhh
Q 003886 706 CNLAL 710 (789)
Q Consensus 706 ~~~~~ 710 (789)
+|...
T Consensus 186 ~d~~~ 190 (255)
T 1whs_A 186 IDDYH 190 (255)
T ss_dssp CBHHH
T ss_pred cCHHH
Confidence 98643
No 467
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.78 E-value=0.0017 Score=70.16 Aligned_cols=162 Identities=10% Similarity=0.115 Sum_probs=100.8
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----ceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeec
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 228 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~ 228 (789)
.....++|++.++.|+++.... ..|+.+...+ ....++.. ... .-.++++.+.++.|+++-.
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~---~~I~~~~~~g~~~~~~~~~~~~~--~~~-------~p~glavD~~~~~lY~~d~- 178 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQ---RMICSTQLDRAHGVSSYDTVISR--DIQ-------APDGLAVDWIHSNIYWTDS- 178 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTT---TEEEEEEC------CCCEEEECS--SCS-------CEEEEEEETTTTEEEEEET-
T ss_pred CcceEEeeeeccCceEEEecCC---CeEEEEEcccCCCCCcceEEEeC--CCC-------CcccEEEEecCCceEEEEC-
Confidence 4577889999999987764432 3566666332 22233221 111 0146778777777766521
Q ss_pred CCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCC
Q 003886 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNE 307 (789)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~ 307 (789)
....|.+++++++..+.+ .... .....++..|.+.
T Consensus 179 ------------------------------------------~~~~I~~~~~~g~~~~~l--~~~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 179 ------------------------------------------VLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHG 214 (400)
T ss_dssp ------------------------------------------TTTEEEEECTTTCSEEEE--EECSSCCEEEEEEETTTT
T ss_pred ------------------------------------------CCCeEEEEeCCCCceEEE--EeCCCCCcceEEEecccC
Confidence 235788999888776655 2322 2466788999877
Q ss_pred CCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec-CCCCCccCcceecCCCCEE
Q 003886 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFL 386 (789)
Q Consensus 308 ~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L-t~~~~~~~~p~~SpDG~~l 386 (789)
. |+++-+. ....|+++++ ++...+.+ ..........+++|+++.|
T Consensus 215 ~----ly~td~~-------------~~~~I~~~~~-----------------dG~~~~~~~~~~l~~P~glavd~~~~~l 260 (400)
T 3p5b_L 215 F----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRL 260 (400)
T ss_dssp E----EEEEECS-------------SSCCEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred e----EEEEeCC-------------CCCEEEEEeC-----------------CCCccEEEEECCCCceEEEEEEeCCCEE
Confidence 6 6665432 1236999998 55444444 3333456778999999999
Q ss_pred EEEecCCCCCCCCccccceeEEeecCCCCC
Q 003886 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 387 a~~s~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
+|.... ...|+++|+++...
T Consensus 261 Y~aD~~----------~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 261 YWVDSK----------LHSISSIDVNGGNR 280 (400)
T ss_dssp EEEETT----------TTEEEEEETTSCCC
T ss_pred EEEECC----------CCEEEEEeCCCCcc
Confidence 887643 24799999876443
No 468
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.78 E-value=0.0018 Score=67.55 Aligned_cols=181 Identities=11% Similarity=0.005 Sum_probs=106.0
Q ss_pred ceEEEEEccCCce-EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 273 PSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 273 ~~l~v~d~~~g~~-~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
..|++++++++.. +.+. ...-.....+++.+.+.. |+++-. ....|+++++
T Consensus 57 ~~I~r~~~~g~~~~~~~~-~~~l~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~--------- 108 (318)
T 3sov_A 57 EAIKRTEFNKTESVQNVV-VSGLLSPDGLACDWLGEK----LYWTDS--------------ETNRIEVSNL--------- 108 (318)
T ss_dssp TEEEEEETTSSSCCCEEE-EECCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CcEEEEEccCCCceEEEE-cCCCCCccEEEEEcCCCe----EEEEEC--------------CCCEEEEEEC---------
Confidence 5788888887642 1220 111124567888887776 666532 1236888887
Q ss_pred hhhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeee
Q 003886 352 LELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (789)
Q Consensus 352 ~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~ 430 (789)
++...+.+. .........++.|++..|+|..... ..+|+++++++...+.+...
T Consensus 109 --------dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~-------- 163 (318)
T 3sov_A 109 --------DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---------VPKIERAGMDGSSRFIIINS-------- 163 (318)
T ss_dssp --------TSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS---------SCEEEEEETTSCSCEEEECS--------
T ss_pred --------CCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC---------CCEEEEEEcCCCCeEEEEEC--------
Confidence 554444443 3334456778899888887765321 24799999876433211100
Q ss_pred eccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCC
Q 003886 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 510 (789)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~ 510 (789)
+-. ....++|++++++||++- .....|+++|++++..+.+..... ..-..++.+++.++.+..
T Consensus 164 ----~l~-------~Pnglavd~~~~~lY~aD--~~~~~I~~~d~dG~~~~~~~~~~~-~~P~glav~~~~lywtd~--- 226 (318)
T 3sov_A 164 ----EIY-------WPNGLTLDYEEQKLYWAD--AKLNFIHKSNLDGTNRQAVVKGSL-PHPFALTLFEDILYWTDW--- 226 (318)
T ss_dssp ----SCS-------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSCC-SCEEEEEEETTEEEEEET---
T ss_pred ----CCC-------CccEEEEeccCCEEEEEE--CCCCEEEEEcCCCCceEEEecCCC-CCceEEEEeCCEEEEEec---
Confidence 001 123568999899998874 345579999998766665543221 111245556777777643
Q ss_pred CCCeEEEEeeccc
Q 003886 511 DVPQVKYGYFVDK 523 (789)
Q Consensus 511 ~p~~i~~~~~~~~ 523 (789)
....|++++..++
T Consensus 227 ~~~~V~~~~~~~G 239 (318)
T 3sov_A 227 STHSILACNKYTG 239 (318)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCeEEEEECCCC
Confidence 2345777776433
No 469
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.75 E-value=0.0037 Score=65.12 Aligned_cols=194 Identities=11% Similarity=-0.027 Sum_probs=97.0
Q ss_pred eEEEEEccCCceEeccCCCC---CCccceEEEee-CCCCCccEEEEEeecCC--ceee-eeeeeccCCcceEEEeccccc
Q 003886 274 SLFVININSGEVQAVKGIPK---SLSVGQVVWAP-LNEGLHQYLVFVGWSSE--TRKL-GIKYCYNRPCALYAVRVSLYK 346 (789)
Q Consensus 274 ~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSP-Dg~~~~~~l~f~~~~~~--~~~~-g~~~~~~~~~~l~~~d~~~~~ 346 (789)
.|+++|.++++.+.+..... -.....+++.| ||+ |+++..... .+.. ...........|+++|.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-----l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---- 172 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-----VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---- 172 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-----EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET----
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-----EEEECCcccccccccceehcccCCCceEEEEeC----
Confidence 37777877766554421111 11345788999 885 666542210 0000 00000011246999987
Q ss_pred chhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeE
Q 003886 347 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 426 (789)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v 426 (789)
++++.+.+..........+|+|||+.|++.... ..+|+++++.+.... ....+
T Consensus 173 -------------~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~----------~~~I~~~~~~~~~~~----~~~~~ 225 (322)
T 2fp8_A 173 -------------STKETTLLLKELHVPGGAEVSADSSFVLVAEFL----------SHQIVKYWLEGPKKG----TAEVL 225 (322)
T ss_dssp -------------TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG----------GTEEEEEESSSTTTT----CEEEE
T ss_pred -------------CCCEEEEeccCCccCcceEECCCCCEEEEEeCC----------CCeEEEEECCCCcCC----ccceE
Confidence 555554443332335568999999987665432 247999998753211 11111
Q ss_pred EeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEe--------CCeEEEEEEECCCCcEEEecCCCCC-ce-eEEee
Q 003886 427 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--------GSSQVIISVNVSSGELLRITPAESN-FS-WSLLT 496 (789)
Q Consensus 427 ~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~--------~~~~~l~~~dl~tg~~~~lt~~~~~-~~-~~~~s 496 (789)
.. .+| ...+.+.++|+ |+++... .....|+++|.++..+..+....+. .. ...+.
T Consensus 226 ~~---------~~g-----P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~ 290 (322)
T 2fp8_A 226 VK---------IPN-----PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQ 290 (322)
T ss_dssp EE---------CSS-----EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEE
T ss_pred Ee---------CCC-----CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEE
Confidence 11 011 12456788887 7666544 2246789999854334444433221 11 11222
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 497 LDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 497 ~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
.+++.|++.... ...|.++++.
T Consensus 291 ~~~g~L~v~~~~---~~~i~~~~~~ 312 (322)
T 2fp8_A 291 EHDGLLYIGTLF---HGSVGILVYD 312 (322)
T ss_dssp EETTEEEEECSS---CSEEEEEEC-
T ss_pred EeCCEEEEeecC---CCceEEEecc
Confidence 345666655432 2346666654
No 470
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.74 E-value=0.002 Score=64.08 Aligned_cols=178 Identities=14% Similarity=0.175 Sum_probs=102.1
Q ss_pred CceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 272 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
...|.++|+++|++..-. +-+........+++|+. |+...|. ...++++|.
T Consensus 64 ~S~v~~vD~~Tgkv~~~~--~l~~~~FgeGit~~g~~----ly~ltw~--------------~~~v~v~D~--------- 114 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQI--ELGKRYFGEGISDWKDK----IVGLTWK--------------NGLGFVWNI--------- 114 (262)
T ss_dssp EEEEEEECTTTCCEEEEE--ECCTTCCEEEEEEETTE----EEEEESS--------------SSEEEEEET---------
T ss_pred CceEEEEECCCCcEEEEE--ecCCccceeEEEEeCCE----EEEEEee--------------CCEEEEEEC---------
Confidence 368999999999876542 22222333446677887 7766653 237999998
Q ss_pred hhhhcCCCCCCC-eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeee
Q 003886 352 LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (789)
Q Consensus 352 ~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~ 430 (789)
++.+ ..++.-.. ....+++||+.|+. ++. ..+|+.+|..+.+.. .-+.+.
T Consensus 115 --------~t~~~~~ti~~~~---eG~glt~dg~~L~~-SdG----------s~~i~~iDp~T~~v~-------~~I~V~ 165 (262)
T 3nol_A 115 --------RNLRQVRSFNYDG---EGWGLTHNDQYLIM-SDG----------TPVLRFLDPESLTPV-------RTITVT 165 (262)
T ss_dssp --------TTCCEEEEEECSS---CCCCEEECSSCEEE-CCS----------SSEEEEECTTTCSEE-------EEEECE
T ss_pred --------ccCcEEEEEECCC---CceEEecCCCEEEE-ECC----------CCeEEEEcCCCCeEE-------EEEEec
Confidence 4444 33443321 34567789987654 432 247999998775432 111111
Q ss_pred eccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC-------------CceeEEeee
Q 003886 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-------------NFSWSLLTL 497 (789)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~-------------~~~~~~~s~ 497 (789)
.... .+ ..+..+.|. || +||+. .+. ...|.++|+.+|++.......+ .....++++
T Consensus 166 ~~g~--~~-----~~lNELe~~-~G-~lyan-~w~-~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 166 AHGE--EL-----PELNELEWV-DG-EIFAN-VWQ-TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp ETTE--EC-----CCEEEEEEE-TT-EEEEE-ETT-SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET
T ss_pred cCCc--cc-----cccceeEEE-CC-EEEEE-Ecc-CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC
Confidence 1000 00 011124565 66 47643 333 3479999999999876433211 123457778
Q ss_pred cCCEEEEEEeCCCCCCeEEEEeec
Q 003886 498 DGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 498 dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
+++.|+.+.-.. |.+|.+.+.
T Consensus 235 ~~~~lfVTGK~W---p~~~ev~~~ 255 (262)
T 3nol_A 235 EHHRLFVTGKLW---PKVFEITLT 255 (262)
T ss_dssp TTTEEEEEETTC---SEEEEEEEE
T ss_pred CCCEEEEECCCC---CceEEEEEe
Confidence 888877777555 446666553
No 471
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.73 E-value=0.0026 Score=64.10 Aligned_cols=174 Identities=5% Similarity=-0.053 Sum_probs=91.6
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (789)
..|+++|..++....+. ......+..++++|||+ |+++.. ...|+++|.
T Consensus 46 ~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~---------------~~~i~~~d~---------- 94 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLP-FNGLYQPQGLAVDGAGT-----VYVTDF---------------NNRVVTLAA---------- 94 (270)
T ss_dssp CEEEEECC-----EECC-CCSCCSCCCEEECTTCC-----EEEEET---------------TTEEEEECT----------
T ss_pred CcEEEecCCCcccceEe-eCCcCCcceeEECCCCC-----EEEEcC---------------CCEEEEEeC----------
Confidence 56888887766555442 12223567889999986 454431 226888887
Q ss_pred hhhcCCCCCCCeeecCCC-CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeee
Q 003886 353 ELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (789)
Q Consensus 353 ~~~~~~~~~~~~~~Lt~~-~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~ 431 (789)
++.....+... .......+++|||+ |++.... ...|++++..+........
T Consensus 95 -------~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~~~~~~~~~~---------- 146 (270)
T 1rwi_B 95 -------GSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRG----------NNRVVKLAAGSKTQTVLPF---------- 146 (270)
T ss_dssp -------TCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGG----------GTEEEEECTTCCSCEECCC----------
T ss_pred -------CCceEeeeecCCcCCCcceEECCCCC-EEEEECC----------CCEEEEEECCCceeEeecc----------
Confidence 44444433322 23456788999997 4443322 2368888643321110000
Q ss_pred ccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC-CCceeEEeeecCCEEEEEEeCCC
Q 003886 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPV 510 (789)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~ss~~ 510 (789)
..+ ..+..+.+++||+ ||++... ...|+++|.+++......... .......++++| .++++....
T Consensus 147 ----~~~-----~~p~~i~~~~~g~-l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~- 212 (270)
T 1rwi_B 147 ----TGL-----NDPDGVAVDNSGN-VYVTDTD--NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNT- 212 (270)
T ss_dssp ----CSC-----CSCCCEEECTTCC-EEEEEGG--GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTT-
T ss_pred ----ccC-----CCceeEEEeCCCC-EEEEECC--CCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCC-
Confidence 000 1234677889997 7665432 346888898777765543332 222334555555 455444332
Q ss_pred CCCeEEEEeec
Q 003886 511 DVPQVKYGYFV 521 (789)
Q Consensus 511 ~p~~i~~~~~~ 521 (789)
..|++++..
T Consensus 213 --~~v~~~~~~ 221 (270)
T 1rwi_B 213 --NQVVKLLAG 221 (270)
T ss_dssp --SCEEEECTT
T ss_pred --CcEEEEcCC
Confidence 236666654
No 472
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.70 E-value=0.00022 Score=82.97 Aligned_cols=180 Identities=9% Similarity=-0.013 Sum_probs=102.2
Q ss_pred ceEEEEEccC----CceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccc
Q 003886 273 PSLFVININS----GEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 347 (789)
Q Consensus 273 ~~l~v~d~~~----g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 347 (789)
..|+++++++ .....+ +... .....+++.+.++. |+++- . ....|+++++
T Consensus 428 ~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~glavD~~~g~----LY~tD-~-------------~~~~I~v~d~----- 482 (699)
T 1n7d_A 428 RMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSN----IYWTD-S-------------VLGTVSVADT----- 482 (699)
T ss_dssp TSBEEEESCCCCC-CCCCCB--CCSCC--CCCEECCCSSSB----CEECC-T-------------TTSCEEEEBS-----
T ss_pred CeEEEEecCCCCCCcceEEE--EeCCCCCcceEEEEeeCCc----EEEEe-c-------------cCCeEEEEec-----
Confidence 4678888775 233333 2222 23456777776766 55542 1 1236889987
Q ss_pred hhhhhhhhcCCCCCCCeeecCC-CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeE
Q 003886 348 EASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 426 (789)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v 426 (789)
++...+.|.. ........+++|++.+|+|..... ..+|+++++.+...+.+...
T Consensus 483 ------------dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~l~~~---- 537 (699)
T 1n7d_A 483 ------------KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE---- 537 (699)
T ss_dssp ------------SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS---------SCCEEBCCSSSCCCCEESCS----
T ss_pred ------------CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC---------CCeEEEEeCCCCCeeEEEeC----
Confidence 5555555543 234567789999888887765321 24688888765433211100
Q ss_pred EeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC-CceeEEeeecCCEEEEE
Q 003886 427 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAV 505 (789)
Q Consensus 427 ~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~-~~~~~~~s~dg~~l~~~ 505 (789)
... ....++|++++++||++- .+...|++++++++..+.+..... ...-..++.+++.|+++
T Consensus 538 --------~l~-------~PnGlavd~~~~~LY~aD--~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywt 600 (699)
T 1n7d_A 538 --------NIQ-------WPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWT 600 (699)
T ss_dssp --------SCS-------SCCCEEECTTTCCEEEEE--TTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEE
T ss_pred --------CCC-------CccEEEEeccCCEEEEEe--cCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEE
Confidence 001 134678999988898864 344578899987766665543221 11112455567777666
Q ss_pred EeCCCCCCeEEEEeecc
Q 003886 506 SSSPVDVPQVKYGYFVD 522 (789)
Q Consensus 506 ~ss~~~p~~i~~~~~~~ 522 (789)
.... ..|.+++..+
T Consensus 601 d~~~---~~V~~~d~~~ 614 (699)
T 1n7d_A 601 DIIN---EAIFSANRLT 614 (699)
T ss_dssp CSTT---TCEEEEETTT
T ss_pred eCCC---CeEEEEEccC
Confidence 5332 3477777543
No 473
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.70 E-value=6.6e-05 Score=81.85 Aligned_cols=130 Identities=20% Similarity=0.248 Sum_probs=79.1
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHH---------HHH------HHCCcEEEEEcC-CCCCCC
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL---------AFL------SSVGYSLLIVNY-RGSLGF 635 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~---------~~l------a~~Gy~V~~~d~-rGs~G~ 635 (789)
++..+..|++...+ .....|+|+++||||++.......... ..+ -.+-..|+.+|. +| .|+
T Consensus 30 ~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~G-tGf 106 (452)
T 1ivy_A 30 GSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAG-VGF 106 (452)
T ss_dssp TTEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTT-STT
T ss_pred CCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCC-CCc
Confidence 35678888876542 335689999999999964321110000 000 013468999995 56 566
Q ss_pred CchhhccCCCCCCc---ccHHHHHHHHHHHHH-cCCCCCccEEEEEcCccHHHHHHHHHh----CCCceeEEEEeCCccc
Q 003886 636 GEEALQSLPGKVGS---QDVNDVLTAIDHVID-MGLANPSKVTVVGGSHGGFLTTHLIGQ----APDKFVAAAARNPLCN 707 (789)
Q Consensus 636 G~~~~~~~~~~~~~---~~~~D~~~~i~~l~~-~~~~d~~rv~l~G~S~GG~~a~~~~~~----~p~~~~a~v~~~pv~~ 707 (789)
.... ...+.. ...+|...++...++ .+.....++.|+|+||||..+..+|.. .+-.++++++.+|+++
T Consensus 107 S~~~----~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~d 182 (452)
T 1ivy_A 107 SYSD----DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp CEES----SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred CCcC----CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCccC
Confidence 5422 111211 123444444444333 344566889999999999966655543 3467999999999887
Q ss_pred h
Q 003886 708 L 708 (789)
Q Consensus 708 ~ 708 (789)
.
T Consensus 183 ~ 183 (452)
T 1ivy_A 183 Y 183 (452)
T ss_dssp H
T ss_pred h
Confidence 5
No 474
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.67 E-value=0.0054 Score=61.20 Aligned_cols=209 Identities=14% Similarity=0.166 Sum_probs=118.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~ 233 (789)
...+..+|+|+++.|+.+.+. ...++.++..++..+.+.+.+. ...+++++.++|+ ++.+.+.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~g~v~~~i~l~g~--------~D~EGIa~~~~g~-~~vs~E~----- 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK---PAAIVEMTTNGDLIRTIPLDFV--------KDLETIEYIGDNQ-FVISDER----- 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET---TEEEEEEETTCCEEEEEECSSC--------SSEEEEEECSTTE-EEEEETT-----
T ss_pred cCcceeEEeCCCCEEEEEECC---CCeEEEEeCCCCEEEEEecCCC--------CChHHeEEeCCCE-EEEEECC-----
Confidence 457788999999998887765 3569999966777776655321 1127899998885 4333222
Q ss_pred CCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCc-e---Eecc----CCCCCCccceEEEeeC
Q 003886 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-V---QAVK----GIPKSLSVGQVVWAPL 305 (789)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~-~---~~l~----~~~~~~~~~~~~wSPD 305 (789)
...|+++++.... . .... ..+.+.....++|+|+
T Consensus 90 --------------------------------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~ 131 (255)
T 3qqz_A 90 --------------------------------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ 131 (255)
T ss_dssp --------------------------------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT
T ss_pred --------------------------------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCC
Confidence 2456666554322 1 1111 1234556789999999
Q ss_pred CCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeec-------CCCCCccCcce
Q 003886 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-------TESISSAFFPR 378 (789)
Q Consensus 306 g~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L-------t~~~~~~~~p~ 378 (789)
+++ |+.+. +.. +..||.++-- ..+...+.+ ..........+
T Consensus 132 ~~~----L~va~-E~~------------p~~i~~~~g~---------------~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 132 DHT----FWFFK-EKN------------PIEVYKVNGL---------------LSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTE----EEEEE-ESS------------SEEEEEEEST---------------TCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCE----EEEEE-CcC------------CceEEEEccc---------------ccCCceeeecchhhccccccCCceeEE
Confidence 987 66554 322 2257777610 011111111 01123457788
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCcccc--ccCCCCCccccCCC
Q 003886 379 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY--SSSILSNPWLSDGC 456 (789)
Q Consensus 379 ~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~--~~~~~~~~ws~Dg~ 456 (789)
+.|.-..|+.++... ..|..+|..+. .+ ....+.. .+.|+. ......+++.++|+
T Consensus 180 ~dp~tg~lliLS~~s----------~~L~~~d~~g~-~~-------~~~~L~~-----g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 180 FNQQKNTLLVLSHES----------RALQEVTLVGE-VI-------GEMSLTK-----GSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp EETTTTEEEEEETTT----------TEEEEECTTCC-EE-------EEEECST-----TGGGCSSCCCSEEEEEECTTCC
T ss_pred EcCCCCeEEEEECCC----------CeEEEEcCCCC-EE-------EEEEcCC-----ccCCcccccCCCCeeEECCCCC
Confidence 889888888888664 46888887653 21 1111110 111110 01234678999996
Q ss_pred EEEEEEEeCCeEEEEEEECC
Q 003886 457 TMLLSSIWGSSQVIISVNVS 476 (789)
Q Consensus 457 ~l~~~~~~~~~~~l~~~dl~ 476 (789)
||+++. .. .+|++...
T Consensus 237 -lyIvsE-~n--~~y~f~~~ 252 (255)
T 3qqz_A 237 -IYIVSE-PN--RFYRFTPQ 252 (255)
T ss_dssp -EEEEET-TT--EEEEEEC-
T ss_pred -EEEEcC-Cc--eEEEEEec
Confidence 777642 22 67777653
No 475
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.66 E-value=0.005 Score=72.16 Aligned_cols=182 Identities=8% Similarity=-0.048 Sum_probs=105.9
Q ss_pred ceEEEEEccCC----ceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccch
Q 003886 273 PSLFVININSG----EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 348 (789)
Q Consensus 273 ~~l~v~d~~~g----~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 348 (789)
..|+++++++. ..+.+. ...-.....+++.+.++. |+++-. ....|+++++
T Consensus 446 ~~I~~~~l~g~~~~~~~~~vi-~~~l~~P~GLAvD~~~~~----LY~tD~--------------~~~~I~v~~l------ 500 (791)
T 3m0c_C 446 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 500 (791)
T ss_dssp TEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET------
T ss_pred eeEEEEeccCCCCCcceeEEE-ecCCCCcceeeeeecCCc----EEEEec--------------CCCeEEEEeC------
Confidence 56888888763 333331 112235567888888887 666542 2237999998
Q ss_pred hhhhhhhcCCCCCCCeeecCC-CCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEE
Q 003886 349 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 427 (789)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~ 427 (789)
++...+.|.. ........++.|.+..|+|+.... ..+|+++++++...+.+...
T Consensus 501 -----------dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~---------~~~I~~~~~dG~~~~~lv~~----- 555 (791)
T 3m0c_C 501 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE----- 555 (791)
T ss_dssp -----------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCCEEEEECS-----
T ss_pred -----------CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC---------CCeEEEEecCCCceEEEEeC-----
Confidence 5555555533 334466789999988888876321 24799999876443211110
Q ss_pred eeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC-CceeEEeeecCCEEEEEE
Q 003886 428 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 506 (789)
Q Consensus 428 ~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~-~~~~~~~s~dg~~l~~~~ 506 (789)
... ....+++.+++++||++- .+...|+++++++...+.+..... ...-..++.++++|+++-
T Consensus 556 -------~l~-------~P~GLavD~~~~~LYwaD--~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 556 -------NIQ-------WPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 619 (791)
T ss_dssp -------SCS-------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred -------CCC-------CceEEEEecCCCeEEEEe--CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEE
Confidence 001 122456777788898863 344579999998777766654322 112235666777777665
Q ss_pred eCCCCCCeEEEEeeccc
Q 003886 507 SSPVDVPQVKYGYFVDK 523 (789)
Q Consensus 507 ss~~~p~~i~~~~~~~~ 523 (789)
... ..|++++..++
T Consensus 620 ~~~---~~I~~~dk~tG 633 (791)
T 3m0c_C 620 IIN---EAIFSANRLTG 633 (791)
T ss_dssp TTT---TEEEEEETTTC
T ss_pred CCC---CEEEEEeCCCC
Confidence 433 34676664433
No 476
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.65 E-value=0.0093 Score=60.61 Aligned_cols=175 Identities=6% Similarity=-0.037 Sum_probs=90.8
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (789)
..|+++|.++.....+. ......+..++++|||+ |+++.. ....|++++.
T Consensus 100 ~~i~~~d~~g~~~~~~~-~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 149 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFG-ATILQHPRGVTVDNKGR-----IIVVEC--------------KVMRVIIFDQ---------- 149 (286)
T ss_dssp CEEEEECTTSCEEEEEC-TTTCSCEEEEEECTTSC-----EEEEET--------------TTTEEEEECT----------
T ss_pred CEEEEECCCCcEEEEec-CccCCCceEEEEeCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 56888885444344442 22223566889999986 555431 1236888886
Q ss_pred hhhcCCCCCCCeeecC--CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeee
Q 003886 353 ELKESSSEDLPVVNLT--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (789)
Q Consensus 353 ~~~~~~~~~~~~~~Lt--~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~ 430 (789)
++.....+. .........+++|||+ |++.... ...|+++|..+.....+
T Consensus 150 -------~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~g~~~~~~----------- 200 (286)
T 1q7f_A 150 -------NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR----------AHCVKVFNYEGQYLRQI----------- 200 (286)
T ss_dssp -------TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG----------GTEEEEEETTCCEEEEE-----------
T ss_pred -------CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC----------CCEEEEEcCCCCEEEEE-----------
Confidence 433333332 2223456789999998 4333321 24699999644211100
Q ss_pred eccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC--CceeEEeeecCCEEEEEEeC
Q 003886 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSSS 508 (789)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~--~~~~~~~s~dg~~l~~~~ss 508 (789)
.. ...+ ..+..+++++||+ |+++....+ ..|.+++.++..+..+..... ......++++|+ ++++ +.
T Consensus 201 ~~--~g~~-----~~p~~i~~d~~G~-l~v~~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~ 269 (286)
T 1q7f_A 201 GG--EGIT-----NYPIGVGINSNGE-ILIADNHNN-FNLTIFTQDGQLISALESKVKHAQCFDVALMDDGS-VVLA-SK 269 (286)
T ss_dssp SC--TTTS-----CSEEEEEECTTCC-EEEEECSSS-CEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ET
T ss_pred cc--CCcc-----CCCcEEEECCCCC-EEEEeCCCC-EEEEEECCCCCEEEEEcccCCCCcceeEEECCCCc-EEEE-CC
Confidence 00 0000 0123567889996 665543222 257777865544555543222 122346677764 5544 32
Q ss_pred CCCCCeEEEEee
Q 003886 509 PVDVPQVKYGYF 520 (789)
Q Consensus 509 ~~~p~~i~~~~~ 520 (789)
. ..|.+++.
T Consensus 270 -~--~~v~v~~~ 278 (286)
T 1q7f_A 270 -D--YRLYIYRY 278 (286)
T ss_dssp -T--TEEEEEEC
T ss_pred -C--CeEEEEEc
Confidence 2 34555553
No 477
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.62 E-value=0.00055 Score=79.66 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=86.5
Q ss_pred CceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhh
Q 003886 272 QPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 350 (789)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 350 (789)
...|++++++++..+.+ +... .....++++|++.. |+++-+.. ...|+++++
T Consensus 474 ~~~I~v~d~dg~~~~~l--~~~~~~~P~giavDp~~g~----ly~td~~~-------------~~~I~~~~~-------- 526 (699)
T 1n7d_A 474 LGTVSVADTKGVKRKTL--FREQGSKPRAIVVDPVHGF----MYWTDWGT-------------PAKIKKGGL-------- 526 (699)
T ss_dssp TSCEEEEBSSSCCEEEE--CCCSSCCCCCEECCSSSSC----CEECCCSS-------------SCCEEBCCS--------
T ss_pred CCeEEEEecCCCceEEE--EeCCCCCcceEEEccCCCc----EEEcccCC-------------CCeEEEEeC--------
Confidence 35789999988776666 3332 35667899998887 66654211 136888887
Q ss_pred hhhhhcCCCCCCCeeec-CCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEee
Q 003886 351 ELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 429 (789)
Q Consensus 351 ~~~~~~~~~~~~~~~~L-t~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~ 429 (789)
++...+.+ .........++|+|++++|+|+... ..+|+++|+.+...+.+. .
T Consensus 527 ---------dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~----------~~~I~~~d~dG~~~~~~~-------~- 579 (699)
T 1n7d_A 527 ---------NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK----------LHSISSIDVNGGNRKTIL-------E- 579 (699)
T ss_dssp ---------SSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT----------TTEEEEECSSSSCCEEEC-------C-
T ss_pred ---------CCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC----------CCeEEEEccCCCceEEEE-------e-
Confidence 44433333 2333456778999999999887643 247999998753332111 0
Q ss_pred eeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003886 430 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (789)
Q Consensus 430 ~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt 484 (789)
.. ..++ .... .+.|+..||++. .+...|++++..+|+..+..
T Consensus 580 --~~--~~~~-----~P~g--lavd~~~lywtd--~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 580 --DE--KRLA-----HPFS--LAVFEDKVFWTD--IINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp --CS--SSCS-----SCCC--CEEETTEEEEEC--STTTCEEEEETTTEEEEECC
T ss_pred --cC--CcCC-----CceE--eEEECCEEEEEe--CCCCeEEEEEccCCCceEEe
Confidence 00 0000 1112 233556777664 23346788887777665544
No 478
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.58 E-value=0.0083 Score=68.66 Aligned_cols=161 Identities=11% Similarity=0.053 Sum_probs=105.7
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCC-CccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~-~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
.......|+|++..|+++... ...++.+. +++..+.++.... .. .+++..+.++.|+++-.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~---~~~I~r~~~~g~~~~~v~~~g~~~P----------~GlAvD~~~~~LY~tD~---- 99 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDIS---LKTISRAFMNGSALEHVVEFGLDYP----------EGMAVDWLGKNLYWADT---- 99 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETTSCSCEEEECSSCSCC----------CEEEEETTTTEEEEEET----
T ss_pred CceEEEEEECCCCEEEEEECC---CCeEEEEECCCCCcEEEEeCCCCCc----------ceEEEEeCCCEEEEEEC----
Confidence 346688999999998776443 23577777 4444444443221 12 57888888888776521
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~ 310 (789)
....|.+++++++..+.+ .... .....++..|....
T Consensus 100 ---------------------------------------~~~~I~v~~~dG~~~~~l--~~~~l~~P~~iavdp~~G~-- 136 (628)
T 4a0p_A 100 ---------------------------------------GTNRIEVSKLDGQHRQVL--VWKDLDSPRALALDPAEGF-- 136 (628)
T ss_dssp ---------------------------------------TTTEEEEEETTSTTCEEE--ECSSCCCEEEEEEETTTTE--
T ss_pred ---------------------------------------CCCEEEEEecCCCcEEEE--EeCCCCCcccEEEccCCCe--
Confidence 236799999988766655 2222 24568888987665
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEe
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 390 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s 390 (789)
|+++-|. ....|+++++ ++...+.+..........+++++++.|+|..
T Consensus 137 --lY~tD~g-------------~~~~I~r~~~-----------------dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 137 --MYWTEWG-------------GKPKIDRAAM-----------------DGSERTTLVPNVGRANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp --EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSCSSEEEEEEETTTTEEEEEE
T ss_pred --EEEeCCC-------------CCCEEEEEeC-----------------CCCceEEEECCCCCcceEEEccccCEEEEEE
Confidence 6665432 1237999998 5565665555555567789999999998877
Q ss_pred cCCCCCCCCccccceeEEeecCCCCC
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
... ..|+++|+++...
T Consensus 185 ~~~----------~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 185 LDT----------NLIESSNMLGLNR 200 (628)
T ss_dssp TTT----------TEEEEEETTSCSC
T ss_pred CCC----------CEEEEEcCCCCce
Confidence 543 4799999876443
No 479
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.53 E-value=0.013 Score=59.63 Aligned_cols=173 Identities=8% Similarity=-0.049 Sum_probs=89.5
Q ss_pred CceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 272 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
...|+++|. +++...+........+..++++|||+ |+++.. ....|+++|.
T Consensus 119 ~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~--------- 169 (299)
T 2z2n_A 119 GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-----LWFTEN--------------QNNAIGRITE--------- 169 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-----EEEEET--------------TTTEEEEECT---------
T ss_pred CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-----EEEEeC--------------CCCEEEEEcC---------
Confidence 467888888 56555442111223456788899885 665542 1236888885
Q ss_pred hhhhcCCCCCCCeee--cCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEee
Q 003886 352 LELKESSSEDLPVVN--LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 429 (789)
Q Consensus 352 ~~~~~~~~~~~~~~~--Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~ 429 (789)
+++... +...........+++||+ | |++... ...|+++|. ++..... .
T Consensus 170 ---------~g~~~~~~~~~~~~~~~~i~~~~~g~-l-~v~~~~---------~~~i~~~~~-~g~~~~~--------~- 219 (299)
T 2z2n_A 170 ---------SGDITEFKIPTPASGPVGITKGNDDA-L-WFVEII---------GNKIGRITT-SGEITEF--------K- 219 (299)
T ss_dssp ---------TCCEEEEECSSTTCCEEEEEECTTSS-E-EEEETT---------TTEEEEECT-TCCEEEE--------E-
T ss_pred ---------CCcEEEeeCCCCCCcceeEEECCCCC-E-EEEccC---------CceEEEECC-CCcEEEE--------E-
Confidence 223332 222233455678899998 4 333321 236899987 4332111 0
Q ss_pred eeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC--CCceeEEeeecCCEEEEEEe
Q 003886 430 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 430 ~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~--~~~~~~~~s~dg~~l~~~~s 507 (789)
.+.... .+..+.++++|+ |++... +...|+++|. +|+...+.... .......+ ++ +.+++..+
T Consensus 220 --~~~~~~-------~~~~i~~~~~g~-l~v~~~--~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~-g~l~v~~~ 284 (299)
T 2z2n_A 220 --IPTPNA-------RPHAITAGAGID-LWFTEW--GANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DG-ETIWFAME 284 (299)
T ss_dssp --CSSTTC-------CEEEEEECSTTC-EEEEET--TTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CS-SCEEEEET
T ss_pred --CCCCCC-------CceeEEECCCCC-EEEecc--CCceEEEECC-CCceEEEeCCCCCCccceEEe-cC-CCEEEEec
Confidence 000000 123456788887 666532 2346888888 57766653221 12222334 33 44544433
Q ss_pred CCCCCCeEEEEeecc
Q 003886 508 SPVDVPQVKYGYFVD 522 (789)
Q Consensus 508 s~~~p~~i~~~~~~~ 522 (789)
...++++++.+
T Consensus 285 ----~~~l~~~~~~~ 295 (299)
T 2z2n_A 285 ----CDKIGKLTLIK 295 (299)
T ss_dssp ----TTEEEEEEEC-
T ss_pred ----CCcEEEEEcCc
Confidence 13577776543
No 480
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.52 E-value=0.006 Score=71.47 Aligned_cols=161 Identities=10% Similarity=0.110 Sum_probs=101.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----ceeEEEec-CCCccccccCCCcccceeecCCCCEEEEEee
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-----~~~~~~~~-~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~ 227 (789)
.....++|++.+.+|+++.... ..|+.+...+ ....++.. .... .++++.+.++.|+++-.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~---~~I~~~~l~g~~~~~~~~~vi~~~l~~P----------~GLAvD~~~~~LY~tD~ 490 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQ---RMICSTQLDRAHGVSSYDTVISRDIQAP----------DGLAVDWIHSNIYWTDS 490 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTT---TEEEEEEC--------CEEEECSSCSCC----------CEEEEETTTTEEEEEET
T ss_pred CceEEEeecccCCeeEEeeccc---eeEEEEeccCCCCCcceeEEEecCCCCc----------ceeeeeecCCcEEEEec
Confidence 3466788999888887765432 3566666333 22233321 1112 57888888888776521
Q ss_pred cCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCC
Q 003886 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLN 306 (789)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg 306 (789)
....|+++++++...+.+ .... .....++..|.+
T Consensus 491 -------------------------------------------~~~~I~v~~ldG~~~~~l--~~~~l~~P~gIaVDp~~ 525 (791)
T 3m0c_C 491 -------------------------------------------VLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVH 525 (791)
T ss_dssp -------------------------------------------TTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETTT
T ss_pred -------------------------------------------CCCeEEEEeCCCCeEEEE--EeCCCCCcceEEEecCC
Confidence 236799999988776666 2222 246788999987
Q ss_pred CCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecCC-CCCccCcceecCCCCE
Q 003886 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKF 385 (789)
Q Consensus 307 ~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~ 385 (789)
.. |+++-+.. ...|+++++ ++...+.|.. ........+++++++.
T Consensus 526 g~----LYwtD~g~-------------~~~I~~~~~-----------------dG~~~~~lv~~~l~~P~GLavD~~~~~ 571 (791)
T 3m0c_C 526 GF----MYWTDWGT-------------PAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGR 571 (791)
T ss_dssp TE----EEEEECSS-------------SCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTE
T ss_pred CC----EEEecCCC-------------CCeEEEEec-----------------CCCceEEEEeCCCCCceEEEEecCCCe
Confidence 76 66654321 136999998 5555544433 3345667899999999
Q ss_pred EEEEecCCCCCCCCccccceeEEeecCCCCC
Q 003886 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 386 la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
|+|+... ...|+++|+++...
T Consensus 572 LYwaD~~----------~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 572 LYWVDSK----------LHSISSIDVNGGNR 592 (791)
T ss_dssp EEEEETT----------TTEEEEEETTSCSC
T ss_pred EEEEeCC----------CCcEEEEecCCCce
Confidence 9887633 24799999876443
No 481
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.51 E-value=0.0094 Score=61.33 Aligned_cols=161 Identities=12% Similarity=0.189 Sum_probs=92.5
Q ss_pred ccEEEEeCCCCCeEEEEecCCC------------CCCeEEEEecCCceeEEEecCCCccccccCCCcccceeec----CC
Q 003886 155 GASAVVPSPSGSKLLVVRNPEN------------ESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN----SD 218 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~------------~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wS----pD 218 (789)
.....+++|+|+. ++...... ....++.+...++...+....... .++.|+ ||
T Consensus 118 ~~~~i~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~----------~~i~~~~~~d~d 186 (314)
T 1pjx_A 118 GCNDCAFDYEGNL-WITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFP----------NGIAVRHMNDGR 186 (314)
T ss_dssp CCCEEEECTTSCE-EEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSE----------EEEEEEECTTSC
T ss_pred CCcCEEECCCCCE-EEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCc----------ceEEEecccCCC
Confidence 3667899999964 44332210 113577766445554443321222 578899 99
Q ss_pred CCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEcc-CCceE---eccCCCCC
Q 003886 219 ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQ---AVKGIPKS 294 (789)
Q Consensus 219 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~~~---~l~~~~~~ 294 (789)
|+.|++... ....|+++|++ +|+.. .+...+..
T Consensus 187 g~~l~v~~~-------------------------------------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 187 PYQLIVAET-------------------------------------------PTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp EEEEEEEET-------------------------------------------TTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred CCEEEEEEC-------------------------------------------CCCeEEEEECCCCCccccceEEEECCCC
Confidence 987665422 12568888876 45421 11112222
Q ss_pred --CccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCCCC
Q 003886 295 --LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI 371 (789)
Q Consensus 295 --~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~ 371 (789)
.....+++++||+ |+++.. ....|+++|. ++++ ...+....
T Consensus 224 ~~~~p~~i~~d~~G~-----l~v~~~--------------~~~~i~~~d~-----------------~~g~~~~~~~~~~ 267 (314)
T 1pjx_A 224 HEGGADGMDFDEDNN-----LLVANW--------------GSSHIEVFGP-----------------DGGQPKMRIRCPF 267 (314)
T ss_dssp SSCEEEEEEEBTTCC-----EEEEEE--------------TTTEEEEECT-----------------TCBSCSEEEECSS
T ss_pred CCCCCCceEECCCCC-----EEEEEc--------------CCCEEEEEcC-----------------CCCcEeEEEeCCC
Confidence 3456788999986 555432 1236888887 4232 33343333
Q ss_pred CccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCC
Q 003886 372 SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (789)
Q Consensus 372 ~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~ 415 (789)
......+|+|||+.|++..... ..|+++++...+
T Consensus 268 ~~~~~i~~~~dg~~l~v~~~~~----------~~l~~~~~~~~g 301 (314)
T 1pjx_A 268 EKPSNLHFKPQTKTIFVTEHEN----------NAVWKFEWQRNG 301 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTT----------TEEEEEECSSCB
T ss_pred CCceeEEECCCCCEEEEEeCCC----------CeEEEEeCCCCC
Confidence 4567788999999876665432 369999886543
No 482
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.49 E-value=0.015 Score=66.52 Aligned_cols=178 Identities=10% Similarity=-0.018 Sum_probs=108.6
Q ss_pred ceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
..|++++++++..+.+ .... .....++..+.++. |+++-. ....|.++++
T Consensus 59 ~~I~r~~~~g~~~~~v--~~~g~~~P~GlAvD~~~~~----LY~tD~--------------~~~~I~v~~~--------- 109 (628)
T 4a0p_A 59 KTISRAFMNGSALEHV--VEFGLDYPEGMAVDWLGKN----LYWADT--------------GTNRIEVSKL--------- 109 (628)
T ss_dssp TEEEEEETTSCSCEEE--ECSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CeEEEEECCCCCcEEE--EeCCCCCcceEEEEeCCCE----EEEEEC--------------CCCEEEEEec---------
Confidence 6788999988766655 2222 35667888888887 776532 1236899998
Q ss_pred hhhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeee
Q 003886 352 LELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (789)
Q Consensus 352 ~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~ 430 (789)
++...+.|. .........++.|....|+|..... ..+|+++++++.....+...
T Consensus 110 --------dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~---------~~~I~r~~~dG~~~~~l~~~-------- 164 (628)
T 4a0p_A 110 --------DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG---------KPKIDRAAMDGSERTTLVPN-------- 164 (628)
T ss_dssp --------TSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECS--------
T ss_pred --------CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC---------CCEEEEEeCCCCceEEEECC--------
Confidence 555444443 3334466778999777787765321 34799999877554221110
Q ss_pred eccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEeCCC
Q 003886 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 510 (789)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ss~~ 510 (789)
.. ....+.+++++++||++-. +...|+++|++++..+.+..... .-..++.+++.++++...
T Consensus 165 -----~~-------~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~~l~--~P~glav~~~~ly~tD~~-- 226 (628)
T 4a0p_A 165 -----VG-------RANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLNREVIADDLP--HPFGLTQYQDYIYWTDWS-- 226 (628)
T ss_dssp -----CS-------SEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECCS--CEEEEEEETTEEEEEETT--
T ss_pred -----CC-------CcceEEEccccCEEEEEEC--CCCEEEEEcCCCCceEEeeccCC--CceEEEEECCEEEEecCC--
Confidence 01 1235678888888988643 44578999997766644432221 112455566777766532
Q ss_pred CCCeEEEEeeccc
Q 003886 511 DVPQVKYGYFVDK 523 (789)
Q Consensus 511 ~p~~i~~~~~~~~ 523 (789)
-..|++++..++
T Consensus 227 -~~~I~~~dk~tg 238 (628)
T 4a0p_A 227 -RRSIERANKTSG 238 (628)
T ss_dssp -TTEEEEEETTTC
T ss_pred -CCEEEEEECCCC
Confidence 335777775444
No 483
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.45 E-value=0.01 Score=67.81 Aligned_cols=204 Identities=10% Similarity=0.024 Sum_probs=120.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCce--eEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
.....+.|+|+++.|+++... ...++.+...|.. ..++.. +.. .-.+++..+.++.|+++-.
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~---~~~I~r~~~~g~~~~~~v~~~--~~~-------~P~GlAvD~~~~~ly~~d~---- 103 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVS---EEAIKRTEFNKTESVQNVVVS--GLL-------SPDGLACDWLGEKLYWTDS---- 103 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEEC-----CEEEECS--SCS-------CEEEEEEETTTTEEEEEET----
T ss_pred CceEEEEEEeCCCEEEEEECC---CCeEEEEEccCCCceEEEEeC--CCC-------CcCeEEEEecCCEEEEEeC----
Confidence 456788999999998776432 2356666643332 222221 111 1157888888888876522
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~ 310 (789)
....|.++++++...+.+ .... .....++..|.+..
T Consensus 104 ---------------------------------------~~~~I~v~~~dG~~~~~l--~~~~l~~P~~Iavdp~~g~-- 140 (619)
T 3s94_A 104 ---------------------------------------ETNRIEVSNLDGSLRKVL--FWQELDQPRAIALDPSSGF-- 140 (619)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEE--ECSSCSCCCCEEEETTTTE--
T ss_pred ---------------------------------------CCCEEEEEECCCCCEEEE--EeCCCCCCceEEEecCCCe--
Confidence 236799999988766656 2222 25678899998776
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~ 389 (789)
|+|+-+.. ...|++.++ ++...+.+. .........+++++++.|++.
T Consensus 141 --ly~tD~g~-------------~~~I~r~~~-----------------dG~~~~~l~~~~~~~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 141 --MYWTDWGE-------------VPKIERAGM-----------------DGSSRFIIINSEIYWPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp --EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred --EEEeccCC-------------CCEEEEEEC-----------------CCCceEEEEeCCCCCCcEEEEEccCCEEEEE
Confidence 77765321 236999998 555444443 333456678999999999888
Q ss_pred ecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEE
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (789)
... ...|+++|+++...+.+..+. ++ ....+.+ ++..||++ . -+...
T Consensus 189 D~~----------~~~I~~~~~dG~~~~~~~~~~--------------~~-----~P~gi~~--~~~~ly~t-d-~~~~~ 235 (619)
T 3s94_A 189 DAK----------LNFIHKSNLDGTNRQAVVKGS--------------LP-----HPFALTL--FEDILYWT-D-WSTHS 235 (619)
T ss_dssp ETT----------TCCEEEESSSCCEEC----------------------------CCCEEE--SSSEEEEE-C-TTTCS
T ss_pred eCC----------CCeEEEecCCCCccEEEEeCC--------------CC-----CceEEEE--eCCEEEEe-c-CCCCE
Confidence 643 246999998775443221100 00 1123334 34467665 2 23456
Q ss_pred EEEEECCCCcEE
Q 003886 470 IISVNVSSGELL 481 (789)
Q Consensus 470 l~~~dl~tg~~~ 481 (789)
|+++|..+|+..
T Consensus 236 V~~~d~~tg~~~ 247 (619)
T 3s94_A 236 ILACNKYTGEGL 247 (619)
T ss_dssp EEEEESSSCCCC
T ss_pred EEEEECCCCccc
Confidence 899998877643
No 484
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.30 E-value=0.0081 Score=61.07 Aligned_cols=93 Identities=10% Similarity=0.063 Sum_probs=52.6
Q ss_pred ceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
..|+++|.++.....+. .... ..+..++++|||+ |+++.. ....|+++|.
T Consensus 142 ~~i~~~~~~g~~~~~~~-~~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~--------- 192 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFG-CSKHLEFPNGVVVNDKQE-----IFISDN--------------RAHCVKVFNY--------- 192 (286)
T ss_dssp TEEEEECTTSCEEEEEE-CTTTCSSEEEEEECSSSE-----EEEEEG--------------GGTEEEEEET---------
T ss_pred CEEEEEcCCCCEEEEeC-CCCccCCcEEEEECCCCC-----EEEEEC--------------CCCEEEEEcC---------
Confidence 56888886654444442 1122 2466889999986 444431 1236888886
Q ss_pred hhhhcCCCCCCCeeecCCC--CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecC
Q 003886 352 LELKESSSEDLPVVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (789)
Q Consensus 352 ~~~~~~~~~~~~~~~Lt~~--~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~ 412 (789)
++.....+... .......+++|||+ |+... .. ....|.++|..
T Consensus 193 --------~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~-~~--------~~~~i~~~~~~ 237 (286)
T 1q7f_A 193 --------EGQYLRQIGGEGITNYPIGVGINSNGE-ILIAD-NH--------NNFNLTIFTQD 237 (286)
T ss_dssp --------TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEE-CS--------SSCEEEEECTT
T ss_pred --------CCCEEEEEccCCccCCCcEEEECCCCC-EEEEe-CC--------CCEEEEEECCC
Confidence 44444444332 23456788999997 33333 21 11268899854
No 485
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.28 E-value=0.051 Score=55.03 Aligned_cols=171 Identities=12% Similarity=0.051 Sum_probs=90.5
Q ss_pred ceEEEEEccCCceEeccCCC-CCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 273 PSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~-~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
..|+++|.+ ++.+.+. .+ ....+..++++|+|+ |+++.. ....|++++.
T Consensus 83 ~~v~~~d~~-g~~~~~~-~~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~--------- 132 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYP-LPQPDSGPYGITEGLNGD-----IWFTQL--------------NGDRIGKLTA--------- 132 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECSTTC-----EEEEET--------------TTTEEEEECT---------
T ss_pred CeEEEECCC-CCeEEec-CCCCCCCCccceECCCCC-----EEEEcc--------------CCCeEEEECC---------
Confidence 568888877 6655442 22 223566788888886 555441 1236888886
Q ss_pred hhhhcCCCCCCCeeec--CCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEee
Q 003886 352 LELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 429 (789)
Q Consensus 352 ~~~~~~~~~~~~~~~L--t~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~ 429 (789)
+ ++...+ ...........+++||+ |++.... ...|+++|. ++.....
T Consensus 133 --------~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~----------~~~i~~~~~-~g~~~~~---------- 181 (300)
T 2qc5_A 133 --------D-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQ----------NNSIGRITN-TGKLEEY---------- 181 (300)
T ss_dssp --------T-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETT----------TTEEEEECT-TCCEEEE----------
T ss_pred --------C-CCEEEccCCCCCCCceeEEECCCCC-EEEEecC----------CCeEEEECC-CCcEEEe----------
Confidence 4 343322 22233456778899998 4444322 236899987 3322110
Q ss_pred eeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC--CCCceeEEeeecCCEEEEEEe
Q 003886 430 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 430 ~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~--~~~~~~~~~s~dg~~l~~~~s 507 (789)
..+.... .+..+.+.++|+ |++.... ...|++++. +|+...+... ........++++|+ +++...
T Consensus 182 -~~~~~~~-------~~~~i~~d~~g~-l~v~~~~--~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 248 (300)
T 2qc5_A 182 -PLPTNAA-------APVGITSGNDGA-LWFVEIM--GNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE-IWFTEW 248 (300)
T ss_dssp -ECSSTTC-------CEEEEEECTTSS-EEEEETT--TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEET
T ss_pred -eCCCCCC-------CcceEEECCCCC-EEEEccC--CCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC-EEEecc
Confidence 0010001 123456778885 6665432 335788887 6766655322 12223344556655 444432
Q ss_pred CCCCCCeEEEEee
Q 003886 508 SPVDVPQVKYGYF 520 (789)
Q Consensus 508 s~~~p~~i~~~~~ 520 (789)
. ...|++++.
T Consensus 249 ~---~~~i~~~~~ 258 (300)
T 2qc5_A 249 G---ANQIGRITN 258 (300)
T ss_dssp T---TTEEEEECT
T ss_pred C---CCeEEEECC
Confidence 2 234666665
No 486
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.25 E-value=0.025 Score=56.39 Aligned_cols=204 Identities=9% Similarity=0.123 Sum_probs=110.3
Q ss_pred cceeecCCCCEEEEEeecCCCCCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceE-ecc
Q 003886 211 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVK 289 (789)
Q Consensus 211 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~-~l~ 289 (789)
++++|.||+++|+.+.+. .+.|+.+|++ |++. .+.
T Consensus 30 SGla~~~~~~~L~aV~d~-------------------------------------------~~~I~~ld~~-g~v~~~i~ 65 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINK-------------------------------------------PAAIVEMTTN-GDLIRTIP 65 (255)
T ss_dssp EEEEEETTTTEEEEEEET-------------------------------------------TEEEEEEETT-CCEEEEEE
T ss_pred ceeEEeCCCCEEEEEECC-------------------------------------------CCeEEEEeCC-CCEEEEEe
Confidence 899999999888776553 2679999998 5544 442
Q ss_pred CCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCC--Ceeec
Q 003886 290 GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNL 367 (789)
Q Consensus 290 ~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~L 367 (789)
..+......+++.++|. ++ ++.+. ...|+++++.. .+. .....
T Consensus 66 -l~g~~D~EGIa~~~~g~-----~~-vs~E~-------------~~~l~~~~v~~---------------~~~i~~~~~~ 110 (255)
T 3qqz_A 66 -LDFVKDLETIEYIGDNQ-----FV-ISDER-------------DYAIYVISLTP---------------NSEVKILKKI 110 (255)
T ss_dssp -CSSCSSEEEEEECSTTE-----EE-EEETT-------------TTEEEEEEECT---------------TCCEEEEEEE
T ss_pred -cCCCCChHHeEEeCCCE-----EE-EEECC-------------CCcEEEEEcCC---------------CCeeeeeeee
Confidence 23334566788877764 33 33322 23577766621 110 01111
Q ss_pred ------CCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccc
Q 003886 368 ------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 441 (789)
Q Consensus 368 ------t~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~ 441 (789)
..........+|+|++++|+....+. ...||.++ +-.. .....+........ . +
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---------p~~i~~~~---g~~~---~~~l~i~~~~~~~~-~----~ 170 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---------PIEVYKVN---GLLS---SNELHISKDKALQR-Q----F 170 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESS---------SEEEEEEE---STTC---SSCCEEEECHHHHH-T----C
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcC---------CceEEEEc---cccc---CCceeeecchhhcc-c----c
Confidence 12233467899999999987766553 23688887 1100 00001110000000 0 0
Q ss_pred cccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC---------CceeEEeeecCCEEEEEEeCCCCC
Q 003886 442 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVDV 512 (789)
Q Consensus 442 ~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~---------~~~~~~~s~dg~~l~~~~ss~~~p 512 (789)
....+..+.+.|...++|+.+... ..|..+|.++.-+..+.-..+ ......+.++|+ |+.+ +-+
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s--~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~--- 243 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHES--RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEP--- 243 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTT--TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETT---
T ss_pred ccCCceeEEEcCCCCeEEEEECCC--CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCC---
Confidence 011345677888888888876433 467888875442333222211 223457777775 4444 444
Q ss_pred CeEEEEee
Q 003886 513 PQVKYGYF 520 (789)
Q Consensus 513 ~~i~~~~~ 520 (789)
..+|++..
T Consensus 244 n~~y~f~~ 251 (255)
T 3qqz_A 244 NRFYRFTP 251 (255)
T ss_dssp TEEEEEEC
T ss_pred ceEEEEEe
Confidence 45777653
No 487
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.25 E-value=0.014 Score=57.90 Aligned_cols=199 Identities=11% Similarity=0.013 Sum_probs=110.1
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEEEeecCCCCCCCc
Q 003886 158 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 236 (789)
Q Consensus 158 ~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 236 (789)
-..|+ || .+|.+.+..+.+.+..++ .+++..+.+.++... .+.-..++|++|+.+..
T Consensus 47 GL~~~-~~--~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~----------FgeGit~~g~~ly~ltw--------- 104 (262)
T 3nol_A 47 GFFYR-NG--YFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY----------FGEGISDWKDKIVGLTW--------- 104 (262)
T ss_dssp EEEEE-TT--EEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC----------CEEEEEEETTEEEEEES---------
T ss_pred eEEEE-CC--EEEEECCCCCCceEEEEECCCCcEEEEEecCCcc----------ceeEEEEeCCEEEEEEe---------
Confidence 45677 54 456666554566788888 778887777765433 23335567777755421
Q ss_pred cCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEE
Q 003886 237 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFV 316 (789)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~ 316 (789)
....++++|.++.++..- ++-. ......++||+. +|+
T Consensus 105 ----------------------------------~~~~v~v~D~~t~~~~~t--i~~~--~eG~glt~dg~~-----L~~ 141 (262)
T 3nol_A 105 ----------------------------------KNGLGFVWNIRNLRQVRS--FNYD--GEGWGLTHNDQY-----LIM 141 (262)
T ss_dssp ----------------------------------SSSEEEEEETTTCCEEEE--EECS--SCCCCEEECSSC-----EEE
T ss_pred ----------------------------------eCCEEEEEECccCcEEEE--EECC--CCceEEecCCCE-----EEE
Confidence 237899999999876543 1211 133456689986 455
Q ss_pred eecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCC--CCCccC---cceecCCCCEEEEEe
Q 003886 317 GWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE--SISSAF---FPRFSPDGKFLVFLS 390 (789)
Q Consensus 317 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~--~~~~~~---~p~~SpDG~~la~~s 390 (789)
++. ...|+.+|. ++.+ ...+.- ...... ...|. ||+ |+ ..
T Consensus 142 SdG--------------s~~i~~iDp-----------------~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-ly-an 187 (262)
T 3nol_A 142 SDG--------------TPVLRFLDP-----------------ESLTPVRTITVTAHGEELPELNELEWV-DGE-IF-AN 187 (262)
T ss_dssp CCS--------------SSEEEEECT-----------------TTCSEEEEEECEETTEECCCEEEEEEE-TTE-EE-EE
T ss_pred ECC--------------CCeEEEEcC-----------------CCCeEEEEEEeccCCccccccceeEEE-CCE-EE-EE
Confidence 532 236999997 4433 233322 111122 24565 774 44 33
Q ss_pred cCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCC--CCccccccCCCCCccccCCCEEEEEEEeCCeE
Q 003886 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD--CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (789)
Q Consensus 391 ~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~--~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (789)
.- ....|.++|..+++... .+++-...... ..+ -...+..++|+|++++||+++ ....
T Consensus 188 ~w---------~~~~I~vIDp~tG~V~~-------~Id~~~L~~~~~~~~~--~~~vlNGIA~dp~~~~lfVTG--K~Wp 247 (262)
T 3nol_A 188 VW---------QTNKIVRIDPETGKVTG-------IIDLNGILAEAGPLPS--PIDVLNGIAWDKEHHRLFVTG--KLWP 247 (262)
T ss_dssp ET---------TSSEEEEECTTTCBEEE-------EEECTTGGGGSCSCCS--SCCCEEEEEEETTTTEEEEEE--TTCS
T ss_pred Ec---------cCCeEEEEECCCCcEEE-------EEECCcCccccccccC--cCCceEEEEEcCCCCEEEEEC--CCCC
Confidence 21 13479999998876521 11111000000 000 001124678999999998875 3345
Q ss_pred EEEEEEC
Q 003886 469 VIISVNV 475 (789)
Q Consensus 469 ~l~~~dl 475 (789)
.||.+.+
T Consensus 248 ~~~ev~~ 254 (262)
T 3nol_A 248 KVFEITL 254 (262)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 6776654
No 488
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.22 E-value=0.042 Score=54.04 Aligned_cols=178 Identities=13% Similarity=0.201 Sum_probs=99.3
Q ss_pred CceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 272 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
...|.++|+++|++..-...+. .......+++++. |+-..|. ...++++|.
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~----ly~ltw~--------------~~~v~v~D~--------- 92 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDR----LIQLTWR--------------NHEGFVYDL--------- 92 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEESS--------------SSEEEEEET---------
T ss_pred CceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCE----EEEEEee--------------CCEEEEEEC---------
Confidence 4789999999999865421222 2233445667777 6666653 337999997
Q ss_pred hhhhcCCCCCCC-eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeee
Q 003886 352 LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (789)
Q Consensus 352 ~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~ 430 (789)
++.+ ..++.... ....+++||+.|+ .++. ..+|+++|..+.+.. .-+.+.
T Consensus 93 --------~tl~~~~ti~~~~---~Gwglt~dg~~L~-vSdg----------s~~l~~iDp~t~~~~-------~~I~V~ 143 (243)
T 3mbr_X 93 --------ATLTPRARFRYPG---EGWALTSDDSHLY-MSDG----------TAVIRKLDPDTLQQV-------GSIKVT 143 (243)
T ss_dssp --------TTTEEEEEEECSS---CCCEEEECSSCEE-EECS----------SSEEEEECTTTCCEE-------EEEECE
T ss_pred --------CcCcEEEEEeCCC---CceEEeeCCCEEE-EECC----------CCeEEEEeCCCCeEE-------EEEEEc
Confidence 4443 33443321 3456678998765 4532 246999998775432 111111
Q ss_pred eccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC--------------CCceeEEee
Q 003886 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLT 496 (789)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~--------------~~~~~~~~s 496 (789)
..+ ++ ...+..+.|. +|+ || ...+.. ..|.++|+.+|++....... ...+..+++
T Consensus 144 ~~g----~~---~~~lNeLe~~-~G~-ly-anvw~s-~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d 212 (243)
T 3mbr_X 144 AGG----RP---LDNLNELEWV-NGE-LL-ANVWLT-SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFD 212 (243)
T ss_dssp ETT----EE---CCCEEEEEEE-TTE-EE-EEETTT-TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEE
T ss_pred cCC----cc---cccceeeEEe-CCE-EE-EEECCC-CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEc
Confidence 110 00 0011123344 564 65 334433 37999999999986543211 122345677
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeec
Q 003886 497 LDGDNIIAVSSSPVDVPQVKYGYFV 521 (789)
Q Consensus 497 ~dg~~l~~~~ss~~~p~~i~~~~~~ 521 (789)
+++++|+.+.-.. |.+|.+.+.
T Consensus 213 ~~~~~lfVTGK~w---p~~~~v~~~ 234 (243)
T 3mbr_X 213 AEHDRLFVTGKRW---PMLYEIRLT 234 (243)
T ss_dssp TTTTEEEEEETTC---SEEEEEEEC
T ss_pred CCCCEEEEECCCC---CcEEEEEEe
Confidence 7777777666444 446666553
No 489
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.15 E-value=0.013 Score=58.28 Aligned_cols=174 Identities=13% Similarity=0.009 Sum_probs=96.3
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhh
Q 003886 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (789)
..|.++|+++|++..-. .+. .......+++|+. |+...|.. ..++++|.
T Consensus 75 g~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~----Ly~ltw~~--------------~~v~V~D~---------- 123 (268)
T 3nok_A 75 GTLRQLSLESAQPVWME-RLG--NIFAEGLASDGER----LYQLTWTE--------------GLLFTWSG---------- 123 (268)
T ss_dssp TEEEECCSSCSSCSEEE-ECT--TCCEEEEEECSSC----EEEEESSS--------------CEEEEEET----------
T ss_pred CEEEEEECCCCcEEeEE-CCC--CcceeEEEEeCCE----EEEEEccC--------------CEEEEEEC----------
Confidence 34999999999875542 222 2223346778888 87776532 37999997
Q ss_pred hhhcCCCCCCC-eeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeee
Q 003886 353 ELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (789)
Q Consensus 353 ~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~ 431 (789)
++.+ ..++... .....+++||+.|+. ++. ..+|+.+|..+.+.. .-+.+..
T Consensus 124 -------~Tl~~~~ti~~~---~eGwGLt~Dg~~L~v-SdG----------s~~l~~iDp~T~~v~-------~~I~V~~ 175 (268)
T 3nok_A 124 -------MPPQRERTTRYS---GEGWGLCYWNGKLVR-SDG----------GTMLTFHEPDGFALV-------GAVQVKL 175 (268)
T ss_dssp -------TTTEEEEEEECS---SCCCCEEEETTEEEE-ECS----------SSEEEEECTTTCCEE-------EEEECEE
T ss_pred -------CcCcEEEEEeCC---CceeEEecCCCEEEE-ECC----------CCEEEEEcCCCCeEE-------EEEEeCC
Confidence 4443 3344322 123466789997754 432 247999998775432 1111111
Q ss_pred ccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC--------------CCceeEEeee
Q 003886 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLTL 497 (789)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~--------------~~~~~~~~s~ 497 (789)
.+..-. .+..+.|. || +||+. .+. ...|.++|+++|++....... ......++++
T Consensus 176 ~g~~v~-------~lNeLe~~-dG-~lyan-vw~-s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 176 RGQPVE-------LINELECA-NG-VIYAN-IWH-SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp TTEECC-------CEEEEEEE-TT-EEEEE-ETT-CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred CCcccc-------cccccEEe-CC-EEEEE-ECC-CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 111000 11234565 77 47643 333 347999999999986543211 1223346666
Q ss_pred cCCEEEEEEeCCCCCCeEEEEe
Q 003886 498 DGDNIIAVSSSPVDVPQVKYGY 519 (789)
Q Consensus 498 dg~~l~~~~ss~~~p~~i~~~~ 519 (789)
++++|+.+.-.. |.+|.+.
T Consensus 245 ~~~rlfVTGK~W---p~~~ev~ 263 (268)
T 3nok_A 245 GSGRIFMTGKLW---PRLFEVR 263 (268)
T ss_dssp TTCCEEEEETTC---SEEEEEE
T ss_pred CCCEEEEeCCCC---CceEEEE
Confidence 677666655433 3355444
No 490
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.10 E-value=0.031 Score=58.18 Aligned_cols=120 Identities=9% Similarity=0.102 Sum_probs=62.0
Q ss_pred cceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCC-eeecCC--CCCc
Q 003886 297 VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE--SISS 373 (789)
Q Consensus 297 ~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~--~~~~ 373 (789)
...++++||+.. |+++. . ....|.+++. ++++ ...+.. ....
T Consensus 198 p~gia~d~~~g~----l~v~d-~-------------~~~~I~~~~~-----------------~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 198 PHSLALVPHLDQ----LCVAD-R-------------ENGRIQCFKT-----------------DTKEFVREIKHASFGRN 242 (329)
T ss_dssp EEEEEEETTTTE----EEEEE-T-------------TTTEEEEEET-----------------TTCCEEEEECCTTTTTC
T ss_pred CcEEEEECCCCE----EEEEE-C-------------CCCEEEEEEC-----------------CCCcEEEEEeccccCCC
Confidence 567899999665 55443 2 2236888887 4343 334422 2234
Q ss_pred cCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEeeeeccCCCCCccccccCCCCCcccc
Q 003886 374 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 453 (789)
Q Consensus 374 ~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~~~~~~~~~f~g~~~~~~~~~~ws~ 453 (789)
....+|+| | +++..+......+ .....++++|..+++.... +.. ....+ ..+..++++|
T Consensus 243 ~~~~~~~p-g--~~~~~~g~~~v~~--~~~~~v~~~~~~~g~~~~~----------~~~-~~~~~-----~~p~~ia~~~ 301 (329)
T 3fvz_A 243 VFAISYIP-G--FLFAVNGKPYFGD--QEPVQGFVMNFSSGEIIDV----------FKP-VRKHF-----DMPHDIVASE 301 (329)
T ss_dssp EEEEEEET-T--EEEEEECCCCTTC--SCCCCEEEEETTTCCEEEE----------ECC-SSSCC-----SSEEEEEECT
T ss_pred cceeeecC-C--EEEEeCCCEEecc--CCCcEEEEEEcCCCeEEEE----------EcC-CCCcc-----CCeeEEEECC
Confidence 55678899 4 2333332211111 1234789999877554211 100 00011 1234667899
Q ss_pred CCCEEEEEEEeCCeEEEEEEEC
Q 003886 454 DGCTMLLSSIWGSSQVIISVNV 475 (789)
Q Consensus 454 Dg~~l~~~~~~~~~~~l~~~dl 475 (789)
|| .||++....+ .|+++++
T Consensus 302 dG-~lyvad~~~~--~I~~~~~ 320 (329)
T 3fvz_A 302 DG-TVYIGDAHTN--TVWKFTL 320 (329)
T ss_dssp TS-EEEEEESSSC--CEEEEEE
T ss_pred CC-CEEEEECCCC--EEEEEeC
Confidence 99 6877654444 4444444
No 491
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.10 E-value=0.0075 Score=61.35 Aligned_cols=185 Identities=13% Similarity=0.079 Sum_probs=98.9
Q ss_pred CccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccch
Q 003886 269 GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 348 (789)
Q Consensus 269 ~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 348 (789)
+..+..|+++|.++|+...-...........+.++|||+. ++.. . ..|+.+|.
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~i-----lvs~-~---------------~~V~~~d~------ 63 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEI-----LFSY-S---------------KGAKMITR------ 63 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCE-----EEEC-B---------------SEEEEECT------
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCE-----EEeC-C---------------CCEEEECC------
Confidence 3456889999998998765521222135678899999984 4432 1 14777775
Q ss_pred hhhhhhhcCCCCCCCeeecCCC-CCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEE
Q 003886 349 ASELELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 427 (789)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~~-~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~ 427 (789)
++....++..+ ........++|||+.|+-.+.. ..+++.+|.++ +.. ..+
T Consensus 64 -----------~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~----------~~~v~~vd~~G-k~l------~~~- 114 (276)
T 3no2_A 64 -----------DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH----------PSTILEVNMKG-EVL------SKT- 114 (276)
T ss_dssp -----------TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST----------TEEEEEECTTS-CEE------EEE-
T ss_pred -----------CCCEEEEEcCCCCccccccEECCCCCEEEEecCC----------CCEEEEEeCCC-CEE------EEE-
Confidence 33444444432 1235567899999987655531 23577777533 221 000
Q ss_pred eeeeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCceeEEeeecCCEEEEEEe
Q 003886 428 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 428 ~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s 507 (789)
.+ .. ..++.. .........+||+.++ +. .....++.+|.+ |+...-.............++|+.++...
T Consensus 115 ~~---~~--~~~~~~-~~~~~v~~~~~G~~lv-~~--~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~- 183 (276)
T 3no2_A 115 EF---ET--GIERPH-AQFRQINKNKKGNYLV-PL--FATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACG- 183 (276)
T ss_dssp EE---CC--SCSSGG-GSCSCCEECTTSCEEE-EE--TTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECB-
T ss_pred ec---cC--CCCccc-ccccCceECCCCCEEE-Ee--cCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeC-
Confidence 00 00 000000 0122445778998554 33 233468888987 66654433222122234556666554432
Q ss_pred CCCCCCeEEEEeeccc
Q 003886 508 SPVDVPQVKYGYFVDK 523 (789)
Q Consensus 508 s~~~p~~i~~~~~~~~ 523 (789)
. ...++.++..++
T Consensus 184 ~---~~~v~~~d~~tG 196 (276)
T 3no2_A 184 D---AHCFVQLNLESN 196 (276)
T ss_dssp T---TSEEEEECTTTC
T ss_pred C---CCeEEEEeCcCC
Confidence 2 235777776644
No 492
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.08 E-value=0.011 Score=62.30 Aligned_cols=67 Identities=9% Similarity=0.183 Sum_probs=37.4
Q ss_pred cccEEEEeCCCCCeEEEEecCC--CCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCEEEE
Q 003886 154 TGASAVVPSPSGSKLLVVRNPE--NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAY 224 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~--~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~d~~~~~~~wSpDg~~la~ 224 (789)
..+..++++|+|+ |+++.... .....++.++ .+++..+.+.++.... .......++.++|++..+++
T Consensus 67 ~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~---~~~~~~~~v~vd~~~g~~yv 136 (343)
T 2qe8_A 67 DTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT---LSNSFVNDLAVDLIHNFVYI 136 (343)
T ss_dssp SCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS---CTTCCCCEEEEETTTTEEEE
T ss_pred eEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc---ccccccceEEEecCCCEEEE
Confidence 4577889999986 54443220 0134577777 5676566665532210 01112368899988765544
No 493
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.06 E-value=0.11 Score=59.19 Aligned_cols=161 Identities=12% Similarity=0.088 Sum_probs=101.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-ceeEEEecC-CCccccccCCCcccceeecCCCCEEEEEeecCCC
Q 003886 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-QLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (789)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-~~~~~~~~~-~~~~g~v~~d~~~~~~~wSpDg~~la~~~~~~~~ 231 (789)
.......+.+.+..|++.... ...++.+..+| ..+.++... ... .++++.+.++.|+++-.
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~---~~~I~r~~~~g~~~~~v~~~~~~~p----------~GlAvD~~~~~lY~tD~---- 411 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDE---VRAIRRSFIDGSGSQFVVTAQIAHP----------DGIAVDWVARNLYWTDT---- 411 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETT---TTEEEEEETTSCSCEEEECSSCSCC----------CEEEEETTTTEEEEEET----
T ss_pred CccEEEEEEcCCCeEEEEeCC---CCeEEEEEcCCCccEEEEECCCCCc----------CceEEecccCcEEEEeC----
Confidence 346678899988888776442 23577777433 444443321 122 57788777777766521
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCcceeeCCcccccCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCc
Q 003886 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLH 310 (789)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~ 310 (789)
....|.+.++++...+.+ .... .....++..|....
T Consensus 412 ---------------------------------------~~~~I~v~~~~G~~~~~l--~~~~l~~P~~iavdp~~G~-- 448 (619)
T 3s94_A 412 ---------------------------------------GTDRIEVTRLNGTMRKIL--ISEDLEEPRAIVLDPMVGY-- 448 (619)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEE--ECTTCCSEEEEEEETTTTE--
T ss_pred ---------------------------------------CCCcEEEEeCCCCeEEEE--EECCCCCeeeEEEEcCCCc--
Confidence 236788999887766555 2222 25668888887555
Q ss_pred cEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhhhhhhcCCCCCCCeeecC-CCCCccCcceecCCCCEEEEE
Q 003886 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFL 389 (789)
Q Consensus 311 ~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~la~~ 389 (789)
|+|+-+.. ...|++.++ ++...+.|. .........+++++++.|++.
T Consensus 449 --ly~tD~g~-------------~~~I~r~~~-----------------dG~~~~~l~~~~l~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 449 --MYWTDWGE-------------IPKIERAAL-----------------DGSDRVVLVNTSLGWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp --EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred --EEEecCCC-------------CCEEEEEcc-----------------CCCccEEEEeCCCCCCeeeEEcccCCEEEEE
Confidence 66664321 236889987 444444443 334456678899999999887
Q ss_pred ecCCCCCCCCccccceeEEeecCCCCC
Q 003886 390 SAKSSVDSGAHSATDSLHRIDWPTNGN 416 (789)
Q Consensus 390 s~~~~~~~g~~~~~~~L~~~d~~~~~~ 416 (789)
.... .+|.++++++...
T Consensus 497 D~~~----------~~I~~~~~dG~~~ 513 (619)
T 3s94_A 497 DAKT----------DKIEVMNTDGTGR 513 (619)
T ss_dssp ETTT----------TEEEEEESSSCCC
T ss_pred ECCC----------CEEEEEecCCCce
Confidence 6442 4799999876543
No 494
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.97 E-value=0.14 Score=53.73 Aligned_cols=108 Identities=16% Similarity=0.051 Sum_probs=62.9
Q ss_pred CceEEEEEccCCceEeccCCCC--CCccceEEEeeCCCCCccEEEEEeec--CCceeeee-e-eeccCCcceEEEecccc
Q 003886 272 QPSLFVININSGEVQAVKGIPK--SLSVGQVVWAPLNEGLHQYLVFVGWS--SETRKLGI-K-YCYNRPCALYAVRVSLY 345 (789)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~--~~~~~~~~wSPDg~~~~~~l~f~~~~--~~~~~~g~-~-~~~~~~~~l~~~d~~~~ 345 (789)
...||.++.+++..+.+....+ -....+++..+||+ ++++..- .++. .+. . +.......||+++.
T Consensus 140 ~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-----fyvt~~~~ftd~~-~~~~e~~~~~~~g~vyr~d~--- 210 (355)
T 3sre_A 140 TVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-----FYATNDHYFIDPY-LKSWEMHLGLAWSFVTYYSP--- 210 (355)
T ss_dssp EEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-----EEEEESCSCSSHH-HHHHHHHTTCCCEEEEEECT---
T ss_pred eEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-----EEecCCcEeCCcc-cccchhhccCCccEEEEEEC---
Confidence 3567778877665554421111 12567889999987 4444321 1100 000 0 00012357999884
Q ss_pred cchhhhhhhhcCCCCCCCeeecCCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCC
Q 003886 346 KSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (789)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~ 414 (789)
++++.+..+......++|||||++|++.... ..+|+++++...
T Consensus 211 ----------------~~~~~~~~~l~~pNGia~spDg~~lYvadt~----------~~~I~~~~~~~~ 253 (355)
T 3sre_A 211 ----------------NDVRVVAEGFDFANGINISPDGKYVYIAELL----------AHKIHVYEKHAN 253 (355)
T ss_dssp ----------------TCCEEEEEEESSEEEEEECTTSSEEEEEEGG----------GTEEEEEEECTT
T ss_pred ----------------CeEEEeecCCcccCcceECCCCCEEEEEeCC----------CCeEEEEEECCC
Confidence 2455555444556779999999998877643 257999998753
No 495
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.87 E-value=0.14 Score=51.64 Aligned_cols=169 Identities=9% Similarity=0.024 Sum_probs=87.6
Q ss_pred ceEEEEEccCCceEeccCCC-CCCccceEEEeeCCCCCccEEEEEeecCCceeeeeeeeccCCcceEEEecccccchhhh
Q 003886 273 PSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (789)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~-~~~~~~~~~wSPDg~~~~~~l~f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (789)
..|+++|.+ ++...+. .+ .......++++|||+ |++... ....|++++.
T Consensus 125 ~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~-----l~v~~~--------------~~~~i~~~~~--------- 174 (300)
T 2qc5_A 125 DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNA-----LWFTEN--------------QNNSIGRITN--------- 174 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSS-----EEEEET--------------TTTEEEEECT---------
T ss_pred CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCC-----EEEEec--------------CCCeEEEECC---------
Confidence 568888887 6655442 22 223456788889886 555441 1235888885
Q ss_pred hhhhcCCCCCCCeeec--CCCCCccCcceecCCCCEEEEEecCCCCCCCCccccceeEEeecCCCCCCCcccceeeEEee
Q 003886 352 LELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 429 (789)
Q Consensus 352 ~~~~~~~~~~~~~~~L--t~~~~~~~~p~~SpDG~~la~~s~~~~~~~g~~~~~~~L~~~d~~~~~~~~~t~~~~~v~~~ 429 (789)
. ++...+ ...........+++||+ |++.... ...|+++|. ++..... .
T Consensus 175 --------~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~----------~~~i~~~~~-~g~~~~~--------~- 224 (300)
T 2qc5_A 175 --------T-GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIM----------GNKIGRITT-TGEISEY--------D- 224 (300)
T ss_dssp --------T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETT----------TTEEEEECT-TCCEEEE--------E-
T ss_pred --------C-CcEEEeeCCCCCCCcceEEECCCCC-EEEEccC----------CCEEEEEcC-CCcEEEE--------E-
Confidence 2 222222 22223456678899996 4443322 235888886 3222110 0
Q ss_pred eeccCCCCCccccccCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC--CCCceeEEeeecCCEEEEEEe
Q 003886 430 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSS 507 (789)
Q Consensus 430 ~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~~dl~tg~~~~lt~~--~~~~~~~~~s~dg~~l~~~~s 507 (789)
.+.... .+..+.++++|+ |++... +...|+++|. +|+...+... ........++++|+ +++. .
T Consensus 225 --~~~~~~-------~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~-~ 289 (300)
T 2qc5_A 225 --IPTPNA-------RPHAITAGKNSE-IWFTEW--GANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGS-VWFA-L 289 (300)
T ss_dssp --CSSTTC-------CEEEEEECSTTC-EEEEET--TTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSC-EEEE-C
T ss_pred --CCCCCC-------CceEEEECCCCC-EEEecc--CCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCC-EEEE-c
Confidence 000000 123456788887 666542 2346788887 5666655322 12222334555655 3333 2
Q ss_pred CCCCCCeEEEEee
Q 003886 508 SPVDVPQVKYGYF 520 (789)
Q Consensus 508 s~~~p~~i~~~~~ 520 (789)
. . .++++++
T Consensus 290 ~--~--~i~~~~p 298 (300)
T 2qc5_A 290 K--C--KIGKLNL 298 (300)
T ss_dssp S--S--EEEEEEE
T ss_pred c--C--ceEEeCC
Confidence 2 2 5777664
No 496
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=96.86 E-value=0.003 Score=65.74 Aligned_cols=96 Identities=10% Similarity=0.026 Sum_probs=61.3
Q ss_pred CCCcEEEEEcCCCCCCCchhhHHHHHHHHHCCcEEEEEcCCCCCCCCchhhccCCCCCCcccHHHHHHHHHHHHHcCCCC
Q 003886 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (789)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~Gy~V~~~d~rGs~G~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (789)
...+.++++||++++ ...|......| ++.|+.+|+++. . ....++++.+.+..++..- ..
T Consensus 44 ~~~~~l~~~hg~~g~--~~~~~~~~~~l---~~~v~~~~~~~~-----~---------~~~~~~~~a~~~~~~i~~~-~~ 103 (316)
T 2px6_A 44 SSERPLFLVHPIEGS--TTVFHSLASRL---SIPTYGLQCTRA-----A---------PLDSIHSLAAYYIDCIRQV-QP 103 (316)
T ss_dssp CSSCCEEEECCTTCC--SGGGHHHHHHC---SSCEEEECCCTT-----S---------CTTCHHHHHHHHHHHHTTT-CS
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhc---CCCEEEEECCCC-----C---------CcCCHHHHHHHHHHHHHHh-CC
Confidence 345678899997664 45666555555 389999999731 0 0123555555444444331 12
Q ss_pred CccEEEEEcCccHHHHHHHHHhCC---Cc---eeEEEEeCCc
Q 003886 670 PSKVTVVGGSHGGFLTTHLIGQAP---DK---FVAAAARNPL 705 (789)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~~~~~p---~~---~~a~v~~~pv 705 (789)
..++.++|||+||.++..++.+.+ +. ++.+++.++.
T Consensus 104 ~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 104 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp SCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 367999999999999999887643 44 7788776654
No 497
>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5
Probab=96.83 E-value=0.005 Score=67.65 Aligned_cols=130 Identities=16% Similarity=0.175 Sum_probs=77.6
Q ss_pred CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHHHHHH--------------------CCcEEEEEcCCCC
Q 003886 573 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--------------------VGYSLLIVNYRGS 632 (789)
Q Consensus 573 g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~--------------------~Gy~V~~~d~rGs 632 (789)
+..+..|++...+.......|++++++|||++... + ..|.+ +-..|+.+|.+-.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~--~----g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvG 121 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSM--D----GALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTG 121 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTH--H----HHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTT
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhh--h----hhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCC
Confidence 56788888865421234578999999999996432 1 11111 2257999996423
Q ss_pred CCCCchhhccC----CCCCCcc---cHHHHHHHHHHHHH-cCCCCCccEEEEEcCccHHHHHHHHHhC------------
Q 003886 633 LGFGEEALQSL----PGKVGSQ---DVNDVLTAIDHVID-MGLANPSKVTVVGGSHGGFLTTHLIGQA------------ 692 (789)
Q Consensus 633 ~G~G~~~~~~~----~~~~~~~---~~~D~~~~i~~l~~-~~~~d~~rv~l~G~S~GG~~a~~~~~~~------------ 692 (789)
.|+........ ...+... ..+|+...+....+ .+..-..++.|+|.||||..+..+|..-
T Consensus 122 tGfSy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~ 201 (483)
T 1ac5_A 122 TGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGD 201 (483)
T ss_dssp STTCSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTS
T ss_pred ccccCCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCc
Confidence 66654321110 0011111 12444444444333 3444567899999999999888776421
Q ss_pred CCceeEEEEeCCccch
Q 003886 693 PDKFVAAAARNPLCNL 708 (789)
Q Consensus 693 p~~~~a~v~~~pv~~~ 708 (789)
.-.++++++.+|+++.
T Consensus 202 ~inLkGi~IGNg~~d~ 217 (483)
T 1ac5_A 202 TYDLKALLIGNGWIDP 217 (483)
T ss_dssp CCEEEEEEEEEECCCH
T ss_pred ccceeeeEecCCcccc
Confidence 1358899999998875
No 498
>4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A*
Probab=96.83 E-value=0.015 Score=58.96 Aligned_cols=133 Identities=18% Similarity=0.224 Sum_probs=82.2
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHHHH----------------HHHHCCcEEEEEcCCCCCCC
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLA----------------FLSSVGYSLLIVNYRGSLGF 635 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~----------------~la~~Gy~V~~~d~rGs~G~ 635 (789)
++..+.-|++...+ .....|+|+++-|||+...........- -+. +-..|+.+|.+-..||
T Consensus 32 ~~~~lFywf~es~~--~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~-~~an~lfiD~PvGtGf 108 (300)
T 4az3_A 32 GSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWN-LIANVLYLESPAGVGF 108 (300)
T ss_dssp TTEEEEEEEECCSS--CTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGG-GSSEEEEECCSTTSTT
T ss_pred CCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHH-hhhcchhhcCCCcccc
Confidence 46778888887653 3456899999999999643221110000 011 1246888987744677
Q ss_pred CchhhccCCCCCC-cccHHHHHHHHHHHHH-cCCCCCccEEEEEcCccHHHHHHHHHhC----CCceeEEEEeCCccchh
Q 003886 636 GEEALQSLPGKVG-SQDVNDVLTAIDHVID-MGLANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLA 709 (789)
Q Consensus 636 G~~~~~~~~~~~~-~~~~~D~~~~i~~l~~-~~~~d~~rv~l~G~S~GG~~a~~~~~~~----p~~~~a~v~~~pv~~~~ 709 (789)
........ ... .....|+...+....+ .+..-..++.|.|-||||..+..+|..- .-.++++++.+|+++..
T Consensus 109 Sy~~~~~~--~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~d~~ 186 (300)
T 4az3_A 109 SYSDDKFY--ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYE 186 (300)
T ss_dssp CEETTCCC--CCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSBHH
T ss_pred cccCCCcc--cccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCccCHH
Confidence 65432111 111 1123455555544333 3445567899999999999888877532 22589999999999863
No 499
>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A*
Probab=96.81 E-value=0.0037 Score=67.15 Aligned_cols=133 Identities=18% Similarity=0.195 Sum_probs=82.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCchhhHHH---------H------HHHHHCCcEEEEEcCCCCCCCC
Q 003886 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---------L------AFLSSVGYSLLIVNYRGSLGFG 636 (789)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~---------~------~~la~~Gy~V~~~d~rGs~G~G 636 (789)
.+..+..|++...+ ...+.|+|++++|||++......... . .-+ .+-..|+.+|.+-..||.
T Consensus 26 ~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW-~~~an~lfiDqPvGtGfS 102 (421)
T 1cpy_A 26 EDKHFFFWTFESRN--DPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSW-NSNATVIFLDQPVNVGFS 102 (421)
T ss_dssp TTEEEEEEEECCSS--CTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCG-GGGSEEECCCCSTTSTTC
T ss_pred CCcEEEEEEEEeCC--CCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCccc-ccccCEEEecCCCccccc
Confidence 35678888886543 34678999999999996432110000 0 001 112468888855346665
Q ss_pred chhhccCCCCCCcccHHHHHHHHHHHHH-cCCCCC--ccEEEEEcCccHHHHHHHHHhC------CCceeEEEEeCCccc
Q 003886 637 EEALQSLPGKVGSQDVNDVLTAIDHVID-MGLANP--SKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLCN 707 (789)
Q Consensus 637 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~-~~~~d~--~rv~l~G~S~GG~~a~~~~~~~------p~~~~a~v~~~pv~~ 707 (789)
...... ..-.....+|+.+.++...+ .+.... .++.|.|.||||..+..++..- .-.++++++.+|++|
T Consensus 103 y~~~~~--~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~d 180 (421)
T 1cpy_A 103 YSGSSG--VSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp EESSCC--CCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCCC
T ss_pred CCCCCC--CCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcccC
Confidence 443211 11111235677777665555 344555 7899999999999888776532 125789999999988
Q ss_pred hh
Q 003886 708 LA 709 (789)
Q Consensus 708 ~~ 709 (789)
..
T Consensus 181 p~ 182 (421)
T 1cpy_A 181 PL 182 (421)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 500
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.78 E-value=0.33 Score=49.69 Aligned_cols=40 Identities=20% Similarity=0.190 Sum_probs=23.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEec
Q 003886 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV 196 (789)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~ 196 (789)
.....+++|||+ | |+.+......+++.+. .+++...+...
T Consensus 73 ~p~gia~~~dG~-l-~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 73 KVSGLAFTSNGD-L-VATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EEEEEEECTTSC-E-EEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CceeEEEcCCCc-E-EEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 355678999998 4 4444321223577766 56666655554
Done!