BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003896
(788 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297740221|emb|CBI30403.3| unnamed protein product [Vitis vinifera]
Length = 853
Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/836 (70%), Positives = 661/836 (79%), Gaps = 56/836 (6%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISS 60
MSRLG+K++VYHGD+ LGELD I V D++FQFPNNEIR+ HISP SERC PLSILHTISS
Sbjct: 1 MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60
Query: 61 FSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYS 120
FS+RCKLESS+P++QP+LINLHASCF+E KTAVV+IGDEE+HLVAMPSKQKKFPCFWCYS
Sbjct: 61 FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120
Query: 121 VSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGM 180
V GLY+S L MLNLRCLAIVFDLDETLIVANTMKSFEDRI+ALR WIARE DQ+R SGM
Sbjct: 121 VPCGLYSSSLWMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALRGWIARESDQVRISGM 180
Query: 181 SAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLV 240
SAELKRY+DDR LLKQYTEND VMDNGK+ KVQ EEV P S++HER+VRPVIR PERN+V
Sbjct: 181 SAELKRYIDDRALLKQYTENDLVMDNGKILKVQSEEVAPLSDSHERVVRPVIRFPERNIV 240
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
LTRINPE RDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 241 LTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEA 300
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA 360
HLIGSKQLLDRVVCVKSGSRKSLLNVFQ G CHPKMAMVIDDR KVWEDKDQPRVHVVP
Sbjct: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVPP 360
Query: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAP 420
FTPYYAPQAET N VP+LCVARNVACNVR FFKEFDEN+LR ISE+FYEDE VNLP+AP
Sbjct: 361 FTPYYAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSAP 420
Query: 421 DVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKS 480
DVSNYLMSEDA F PNG+ N P++EG++G EVERRLNQ ++VDS + NS + +S
Sbjct: 421 DVSNYLMSEDAGFVPNGNANVPIAEGMHGAEVERRLNQ---PHIVDSAASPIANSYEFRS 477
Query: 481 ETSLLPVAVASNATVPAT---VVPSQKPGLLGAPIRRDNSS-------------MKHGFD 524
ET P N P + ++PSQKP LLGAPI+RD SS MKHG D
Sbjct: 478 ETLQPPALTVQNVVGPTSSRLLMPSQKPSLLGAPIKRDFSSFESDADMKRRLLIMKHGQD 537
Query: 525 LRNQNSAQPP----LPK-----LHGQGGWIVEEEVNRVLPNNR----------------- 558
+RNQ+ PP LP+ LH QG W+VE++ NR NNR
Sbjct: 538 VRNQSLGDPPILSRLPQISTSSLHPQGVWLVEDDSNRGHLNNRASGLVQEADVLKPDKQR 597
Query: 559 ----------PVSIATGLPSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSN 608
P S L H Q K +E A++ K+NLPPASQP E+GVSQN S+
Sbjct: 598 GHQIPFGHNTPGSTPVSLLPHLPQLKNDEVSAANERQKKNLPPASQPSEVGVSQNQASTT 657
Query: 609 SREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIG 668
RE TE GK N++P +LSIGVLQEIG+RCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIG
Sbjct: 658 GRE-QTEAGKVNMMPPHLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIG 716
Query: 669 VGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISE 728
VGMGKTRKDAQQQAAENALH LA+KYVAY TP SGA+D+DFDKLSL NENGFLWDT +
Sbjct: 717 VGMGKTRKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAG 776
Query: 729 SNEGLREDGLRKESTPEASEVEPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLKDE 784
S+E L EDG KES EA E+ G+T +S+ NQQVQKR N P+L + IPSKR K+E
Sbjct: 777 SSELLMEDGFPKESISEAGEMAHGTTSSSVVNQQVQKRANSPRLPQSIPSKRSKEE 832
>gi|255574401|ref|XP_002528114.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223532503|gb|EEF34293.1| double-stranded RNA binding protein, putative [Ricinus communis]
Length = 786
Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/824 (66%), Positives = 615/824 (74%), Gaps = 100/824 (12%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISS 60
MSRLG+K+ V+HG++ LGELD I V+D+NFQFPNNEIRI IS S ERC PLSIL TISS
Sbjct: 1 MSRLGFKSKVFHGELLLGELDAIPVTDQNFQFPNNEIRINRISQSGERCPPLSILQTISS 60
Query: 61 FSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYS 120
FS+RCKLESS+P+EQPHLINLHASCFYEFKTAVV IG+EEIHLVAMPSKQKKFPCFWC+
Sbjct: 61 FSVRCKLESSSPIEQPHLINLHASCFYEFKTAVVSIGNEEIHLVAMPSKQKKFPCFWCFP 120
Query: 121 VSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGM 180
V GLY+SCLGMLNLRCL+IVFDLDETLIVANTMKSFEDRIEALR WI RE D +R SGM
Sbjct: 121 VPLGLYDSCLGMLNLRCLSIVFDLDETLIVANTMKSFEDRIEALRVWINRETDPMRISGM 180
Query: 181 SAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLV 240
SAELKRYMDDR LLKQY E+D VMDNGK+FKVQ EEVP SE ER+VRPVIR+ ++N+V
Sbjct: 181 SAELKRYMDDRMLLKQYLESDFVMDNGKMFKVQLEEVPLSSETQERLVRPVIRLQDKNIV 240
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
LTRINPE RDTSVLVRLRPAWE+LRSYL AKGRKRFEVYVC
Sbjct: 241 LTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVC------------------- 281
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA 360
SRKSL NVF G+CHPKMAMVIDDR KVWEDKDQPRVHVVPA
Sbjct: 282 ------------------SRKSLANVFHNGMCHPKMAMVIDDRSKVWEDKDQPRVHVVPA 323
Query: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAP 420
FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLR ISEVFYEDE NLP AP
Sbjct: 324 FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRRISEVFYEDEVNNLPLAP 383
Query: 421 DVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKS 480
DVSNYLMSEDA+F PNG++NAP +EG++G+EVERRLNQSDEK V DS SM N +L+S
Sbjct: 384 DVSNYLMSEDASFVPNGNSNAPFNEGMSGVEVERRLNQSDEKSVTDSASHSMTNCPELRS 443
Query: 481 ETSLLPVAVASNATVPAT---VVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQPPL-- 535
E + P+A+ N P + ++PSQKP LLG P+RR DLRNQ S QPPL
Sbjct: 444 EITQPPIAIIPNVVGPMSSTPLLPSQKPSLLGTPVRR---------DLRNQTSGQPPLLS 494
Query: 536 --------PKLHGQGGWIVEEEVNRVLPNNR---------------------------PV 560
+ QGGW+VEE+++R N+R PV
Sbjct: 495 RVPAPLPSSSIQPQGGWLVEEDISRAHINSRSSGFAQESDILKSDKLRTHLNPFVHSTPV 554
Query: 561 SIATGLPSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTN 620
S +T HASQ KGEE + ++GVSQN VSSNSRE E K N
Sbjct: 555 SASTSSVFHASQVKGEEVCLKG--------------KVGVSQNLVSSNSRESQNEAVKFN 600
Query: 621 LLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQ 680
LL S+LSIGVLQEIG+RC+SKVEFRSVVSTSKDLQFSVEVLFTGEKIG+GMGKTRKDA Q
Sbjct: 601 LLSSHLSIGVLQEIGRRCNSKVEFRSVVSTSKDLQFSVEVLFTGEKIGIGMGKTRKDAHQ 660
Query: 681 QAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRK 740
QAAENAL LAEKYVAYITP SGA+D DFDKLS+ NENGFLWD + S S+E + EDG+ K
Sbjct: 661 QAAENALRCLAEKYVAYITPHSGAVDHDFDKLSIGNENGFLWDIVNSGSSETVPEDGVTK 720
Query: 741 ESTPEASEVEPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLKDE 784
E TPE +EVEPG T ++L NQQ QKR N P+L + IP+KR K+E
Sbjct: 721 ERTPEDNEVEPGITLSNLVNQQQQKRANSPRLQQSIPNKRSKEE 764
>gi|359481666|ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 2-like [Vitis vinifera]
Length = 789
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/820 (66%), Positives = 614/820 (74%), Gaps = 88/820 (10%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISS 60
MSRLG+K++VYHGD+ LGELD I V D++FQFPNNEIR+ HISP SERC PLSILHTISS
Sbjct: 1 MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60
Query: 61 FSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYS 120
FS+RCKLESS+P++QP+LINLHASCF+E KTAVV+IGDEE+HLVAMPSKQKKFPCFWCYS
Sbjct: 61 FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120
Query: 121 VSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGM 180
V GLY+S L MLNLRCLAIVFDLDETLIVANTMKSFEDRI+ALR WIARE DQ+R SGM
Sbjct: 121 VPCGLYSSSLWMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALRGWIARESDQVRISGM 180
Query: 181 SAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLV 240
SAELKRY+DDR LLKQYTEND VMDNGK+ KVQ EEV P S++HER+VRPVIR PERN+V
Sbjct: 181 SAELKRYIDDRALLKQYTENDLVMDNGKILKVQSEEVAPLSDSHERVVRPVIRFPERNIV 240
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
LTRINPE RDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVC
Sbjct: 241 LTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVC------------------- 281
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA 360
SRKSLLNVFQ G CHPKMAMVIDDR KVWEDKDQPRVHVVP
Sbjct: 282 ------------------SRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVPP 323
Query: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAP 420
FTPYYAPQAET N VP+LCVARNVACNVR FFKEFDEN+LR ISE+FYEDE VNLP+AP
Sbjct: 324 FTPYYAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSAP 383
Query: 421 DVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKS 480
DVSNYLMSEDA F PNG+ N P++EG++G EVERRLNQ DEK++VDS + NS + +S
Sbjct: 384 DVSNYLMSEDAGFVPNGNANVPIAEGMHGAEVERRLNQPDEKHIVDSAASPIANSYEFRS 443
Query: 481 ETSLLPVAVASNATVPAT---VVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQPP--- 534
ET P N P + ++PSQKP LLGAPI+R DLRNQ+ PP
Sbjct: 444 ETLQPPALTVQNVVGPTSSRLLMPSQKPSLLGAPIKR---------DLRNQSLGDPPILS 494
Query: 535 -LPK-----LHGQGGWIVEEEVNRVLPNNRPVSIATGLPSHASQAKGEEAIMAHDLHKQN 588
LP+ LH QG W+VE++ NR NNR A+GL A K ++ H + +
Sbjct: 495 RLPQISTSSLHPQGVWLVEDDSNRGHLNNR----ASGLVQEADVLKPDKQ-RGHQIPFGH 549
Query: 589 LPPASQPP------------------------EIGVSQNHVSSNSREFLTEGGKTNLLPS 624
P S P ++GVSQN S+ RE TE GK N++P
Sbjct: 550 NTPGSTPVSLLPHLPQLKNDEVCSVXEFILEIKVGVSQNQASTTGRE-QTEAGKVNMMPP 608
Query: 625 YLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAE 684
+LSIGVLQEIG+RCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAE
Sbjct: 609 HLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAE 668
Query: 685 NALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRKESTP 744
NALH LA+KYVAY TP SGA+D+DFDKLSL NENGFLWDT + S+E L EDG KES
Sbjct: 669 NALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGSSELLMEDGFPKESIS 728
Query: 745 EASEVEPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLKDE 784
EA E+ G+T +S+ NQQVQKR N P+L + IPSKR K+E
Sbjct: 729 EAGEMAHGTTSSSVVNQQVQKRANSPRLPQSIPSKRSKEE 768
>gi|449520076|ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Cucumis sativus]
Length = 837
Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/815 (65%), Positives = 625/815 (76%), Gaps = 44/815 (5%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISS 60
MSRLG+K++V+HGDV LGELD I +D+NFQFPNNEIRI ISP SERC PLS+L TISS
Sbjct: 1 MSRLGFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISS 60
Query: 61 FSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYS 120
FSLRCKL+SS PVEQPHLI LH SCF+E KTA+V++GDEEIHLVAMPSKQK FPCFWC++
Sbjct: 61 FSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFA 120
Query: 121 VSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGM 180
V GLY SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALR WIARE D +R SGM
Sbjct: 121 VPCGLYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRIWIAREADPLRISGM 180
Query: 181 SAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLV 240
SAELKRY++DR LLKQY E+D V DNG++FK Q EEVPP + N E++VRP+IR+ ++NLV
Sbjct: 181 SAELKRYVEDRLLLKQYIEHDTVNDNGRIFKAQLEEVPPLNGNCEKVVRPIIRLLDKNLV 240
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
LTRINPE RDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 241 LTRINPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPEA 300
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA 360
HLI +KQLL+RVVCVKSGS+KSLLNVFQ G CHPKMAMVIDDR KVWEDKDQPRVHVVPA
Sbjct: 301 HLIATKQLLERVVCVKSGSKKSLLNVFQSGSCHPKMAMVIDDRSKVWEDKDQPRVHVVPA 360
Query: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAP 420
FTPYYAPQAETANAVPVLCVARNVACNVRGC+FKE+DE+LLR I E+ YED+ V+LP AP
Sbjct: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCYFKEYDESLLRRILEISYEDDVVDLPPAP 420
Query: 421 DVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKS 480
DVS+Y+MSE+A F PN + NAP+ EG+NG EVERRLNQ D+K+V+D + +D ++
Sbjct: 421 DVSSYMMSEEAGFVPNETVNAPICEGMNGAEVERRLNQPDDKHVIDMANNPTTSQTDARA 480
Query: 481 ETSLLPVAVASNATVPA---TVVPSQKPGLLGAPIRRDNSS----------MKHGFDLRN 527
+TS LP + N T P T++PSQKPGLLGAP+RRD SS MK DLR
Sbjct: 481 DTSQLPTPLNPNITGPKSSRTLLPSQKPGLLGAPVRRDISSDHDMKRGLLAMKPSIDLRT 540
Query: 528 QNSAQPPL-----PKLHGQ-----GGWIVEEEVNRVLPNNRPVSIATGLPSHASQAKGEE 577
Q PP+ P++ G +V+E+ ++ N RP +GL + +K ++
Sbjct: 541 QTFGDPPILSRMSPQISASGLQVLGASLVDEDSSQGHQNRRP----SGLIPESDASKSDK 596
Query: 578 AIMAHDLHKQNLPPASQPPEIGV---SQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEI 634
H H QNL + GV SQNH S+N++E TE G ++ P L IGVLQEI
Sbjct: 597 ----HRSH-QNLFSNNSQALTGVAAISQNHASNNNKEHQTEAGIVSIPPPSLYIGVLQEI 651
Query: 635 GKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKY 694
G+RCSSKVEF++VVSTSKDLQFSVEVLFTGEKIGVG+GKTRKDAQQQAAENALH LA+KY
Sbjct: 652 GRRCSSKVEFKTVVSTSKDLQFSVEVLFTGEKIGVGLGKTRKDAQQQAAENALHNLADKY 711
Query: 695 VAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLR-EDGLRKESTPEASEVEPGS 753
A+I P G MD D DKLS+ ENGFLWDT NE + ED KE++ E + EP S
Sbjct: 712 AAHIKPLMGPMDADLDKLSIGVENGFLWDTAAPAVNELPKEEDVWHKENSSEGCD-EPES 770
Query: 754 TYASLGN----QQVQKRPNVPKLSKLIPSKRLKDE 784
T + N Q VQKR + P + PSKR K++
Sbjct: 771 TNSDSTNHQQPQHVQKRQSSP---RPFPSKRSKED 802
>gi|449460369|ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Cucumis sativus]
Length = 829
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/815 (65%), Positives = 625/815 (76%), Gaps = 44/815 (5%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISS 60
MSRLG+K++V+HGDV LGELD I +D+NFQFPNNEIRI ISP SERC PLS+L TISS
Sbjct: 1 MSRLGFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISS 60
Query: 61 FSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYS 120
FSLRCKL+SS PVEQPHLI LH SCF+E KTA+V++GDEEIHLVAMPSKQK FPCFWC++
Sbjct: 61 FSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFA 120
Query: 121 VSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGM 180
V GLY SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALR WIARE D +R SGM
Sbjct: 121 VPCGLYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRIWIAREADPLRISGM 180
Query: 181 SAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLV 240
SAELKRY++DR LLKQY E+D V DNG++FK Q EEVPP + N E++VRP+IR+ ++NLV
Sbjct: 181 SAELKRYVEDRLLLKQYIEHDTVNDNGRIFKAQLEEVPPLNGNCEKVVRPIIRLLDKNLV 240
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
LTRINPE RDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 241 LTRINPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPEA 300
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA 360
HLI +KQLL+RVVCVKSGS+KSLLNVFQ G CHPKMAMVIDDR KVWEDKDQPRVHVVPA
Sbjct: 301 HLIATKQLLERVVCVKSGSKKSLLNVFQSGSCHPKMAMVIDDRSKVWEDKDQPRVHVVPA 360
Query: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAP 420
FTPYYAPQAETANAVPVLCVARNVACNVRGC+FKE+DE+LLR I E+ YED+ V+LP AP
Sbjct: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCYFKEYDESLLRRILEISYEDDVVDLPPAP 420
Query: 421 DVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKS 480
DVS+Y+MSE+A F PN + NAP+ EG+NG EVERRLNQ D+K+V+D + +D ++
Sbjct: 421 DVSSYMMSEEAGFVPNETVNAPICEGMNGAEVERRLNQPDDKHVIDMANNPTTSQTDARA 480
Query: 481 ETSLLPVAVASNATVPA---TVVPSQKPGLLGAPIRRDNSS----------MKHGFDLRN 527
+TS LP + N T P T++PSQKPGLLGAP+RRD SS MK DLR
Sbjct: 481 DTSQLPTPLNPNITGPKSSRTLLPSQKPGLLGAPVRRDISSDHDMKRGLLAMKPSIDLRT 540
Query: 528 QNSAQPPL-----PKLHGQ-----GGWIVEEEVNRVLPNNRPVSIATGLPSHASQAKGEE 577
Q PP+ P++ G +V+E+ ++ N RP +GL + +K ++
Sbjct: 541 QTFGDPPILSRMSPQISASGLQVLGASLVDEDSSQGHQNRRP----SGLIPESDASKSDK 596
Query: 578 AIMAHDLHKQNLPPASQPPEIGV---SQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEI 634
H H QNL + GV SQNH S+N++E TE G ++ P L IGVLQEI
Sbjct: 597 ----HRSH-QNLFSNNSQALTGVAAISQNHASNNNKEHQTEAGIVSIPPPSLYIGVLQEI 651
Query: 635 GKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKY 694
G+RCSSKVEF++VVSTSKDLQFSVEVLFTGEKIGVG+GKTRKDAQQQAAENALH LA+KY
Sbjct: 652 GRRCSSKVEFKTVVSTSKDLQFSVEVLFTGEKIGVGLGKTRKDAQQQAAENALHNLADKY 711
Query: 695 VAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLR-EDGLRKESTPEASEVEPGS 753
A+I P G MD D DKLS+ ENGFLWDT NE + ED KE++ E + EP S
Sbjct: 712 AAHIKPLMGPMDADLDKLSIGVENGFLWDTAAPAVNELPKEEDVWHKENSSEGCD-EPES 770
Query: 754 TYASLGN----QQVQKRPNVPKLSKLIPSKRLKDE 784
T + N Q VQKR + P + PSKR K++
Sbjct: 771 TNSDSTNHQQPQHVQKRQSSP---RPFPSKRSKED 802
>gi|356521002|ref|XP_003529147.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Glycine max]
Length = 830
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/834 (63%), Positives = 622/834 (74%), Gaps = 67/834 (8%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSD--------ENFQFPNNEIRIRHISPSSERCIPL 52
MSRLG+K+ VY GD +GELD I S NF+FPNNEIRI H S SERC PL
Sbjct: 1 MSRLGFKHEVYDGDKHIGELDVIPPSSLTTTTSFHNNFRFPNNEIRIHHFSAKSERCPPL 60
Query: 53 SILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKK 112
SIL T+++F++RCKL+SS EQ LI +HASCFYE KTAVVV+ DEEIHLV+MPSK+KK
Sbjct: 61 SILQTVAAFNVRCKLDSSVATEQKELIAIHASCFYEMKTAVVVVNDEEIHLVSMPSKRKK 120
Query: 113 FPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREP 172
FPCFWC++V GLY++CLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALR W++RE
Sbjct: 121 FPCFWCFAVPLGLYDACLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLSRET 180
Query: 173 DQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVI 232
D +R GMS+ELKRY++DR LLKQY E+D V+DNGKV+KVQ EE PP S +HE++VRPV+
Sbjct: 181 DPLRVQGMSSELKRYLEDRLLLKQYAESDTVVDNGKVYKVQMEEAPPLSGSHEKLVRPVV 240
Query: 233 RIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEM 292
R+ ERN+VLTRINPE RDTSVLVRLRPAW+DLRSYL AKGRKRFEVYVCTMAERDYALE+
Sbjct: 241 RLQERNIVLTRINPEIRDTSVLVRLRPAWDDLRSYLTAKGRKRFEVYVCTMAERDYALEI 300
Query: 293 WRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQ 352
WRLLDP HLIG KQ+L+RV+CVKSGSRKSLLNVFQ G+CHPKMAMVIDDR KVW DKDQ
Sbjct: 301 WRLLDPGAHLIGLKQVLNRVICVKSGSRKSLLNVFQDGVCHPKMAMVIDDRSKVWVDKDQ 360
Query: 353 PRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDE 412
PRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDE+LL+ I+E+F+ED+
Sbjct: 361 PRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDESLLQRIAEIFFEDD 420
Query: 413 AVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSM 472
LP PDVSNYLMSED PNG+ NAP SEG+NG EVERRL+Q D+K+ VD M
Sbjct: 421 IGLLPHPPDVSNYLMSED---VPNGNANAPFSEGMNGAEVERRLSQPDDKFSVDLSTRPM 477
Query: 473 KNSSDLKSETSLLPVAVASNATVPA---TVVPSQKPGLLGAPIRRDNSS----------- 518
NS + + ETS + SN T P T++PSQKPGLLG P++ D +S
Sbjct: 478 TNSVEFRHETSQPTAGIISNVTGPGSSRTLIPSQKPGLLGPPVKHDGNSVDRDYDMRKGL 537
Query: 519 --MKHGFDLRNQNSAQPPL---------PKL-HGQGGWIVEEEV-NRVLPNNRPV----- 560
M+HG D+R Q SA+PPL P L GG +VE+++ +R N+ P
Sbjct: 538 LGMRHGPDIRGQISAEPPLILRPPNQASPSLMQPFGGGLVEDDIASRSQTNSWPSASVKE 597
Query: 561 ------------------SIATGLPS----HASQAKGEEAIMAHDLHKQNLPPASQ-PPE 597
S+ P+ ASQ K EEA DL +Q +P SQ E
Sbjct: 598 SNVIKSDKHQAQQKPFSNSVIGSSPNVLLPQASQLKAEEATSVSDLQRQIVPSKSQLSSE 657
Query: 598 IGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFS 657
G+SQNH SSNS++F E GK N L S LSI VLQEIG+RC+SKVEF+S++STSKDLQFS
Sbjct: 658 DGISQNHASSNSKDFQHEAGKMNFL-SPLSIQVLQEIGRRCNSKVEFKSILSTSKDLQFS 716
Query: 658 VEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENE 717
VEVLFTGEKIGVGMG+TRKDAQQQAAENAL LAEKYVA++ P+ A+D+DFDKLSL +
Sbjct: 717 VEVLFTGEKIGVGMGRTRKDAQQQAAENALRSLAEKYVAHVEPQCRAVDKDFDKLSLGCD 776
Query: 718 NGFLWDTIISESNEGLREDGLRKESTPEASEVEPGSTYASLGNQQVQKRPNVPK 771
NGFLWD I ES+E EDG+ +E+ EA + E S+ + NQQ+ KR + P+
Sbjct: 777 NGFLWDVINPESSEPQPEDGVSRENASEALDAETRSSTPNAINQQMDKRMSSPR 830
>gi|357505895|ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
gi|355498251|gb|AES79454.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
Length = 796
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/819 (61%), Positives = 612/819 (74%), Gaps = 59/819 (7%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTI-LVSDENFQFPNNEIRIRHISPSSERCIPLSILHTIS 59
M+RLG K V+ GD LGELD +++ +NF+FPNNEI I H + SERC PLSIL ++S
Sbjct: 1 MNRLGLKVEVFEGDARLGELDYFPVIAFQNFRFPNNEIHIHHRTFRSERCPPLSILQSVS 60
Query: 60 SFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCY 119
+F++RCKL+SS VEQP LINLHAS F+E KTAV VIGDEE+HLVAMPSK+KKFPCFWCY
Sbjct: 61 AFNVRCKLDSSLSVEQPLLINLHASMFHEMKTAVAVIGDEELHLVAMPSKRKKFPCFWCY 120
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
+V + LY++C+GMLNLRCL+IVFDLDETLIVANTMKSFEDRI+ALRSW++RE D R G
Sbjct: 121 TVPARLYDACMGMLNLRCLSIVFDLDETLIVANTMKSFEDRIDALRSWLSRETDPSRVQG 180
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMD-NGKVFKVQQEEVPPPSENHERIVRPVIRIPERN 238
MS ELKRY++DR LLKQ+ E+DCV+D NG+ ++VQ EEVP SE ++++RPV+R+ +RN
Sbjct: 181 MSGELKRYLEDRLLLKQFAESDCVVDGNGRQYQVQMEEVPSLSE--QKVMRPVVRLQDRN 238
Query: 239 LVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298
+VLTRINPE RDTSVLVRLRPAWEDLR YL AKGRKRFEVYVCTMAERDYALEMWRLLDP
Sbjct: 239 IVLTRINPEIRDTSVLVRLRPAWEDLRCYLTAKGRKRFEVYVCTMAERDYALEMWRLLDP 298
Query: 299 EGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVV 358
HLIGSKQ+ DRV+CVKSGSRKSLLNVF G+CHPKMAMVIDDR KVWEDKDQPRVHVV
Sbjct: 299 GAHLIGSKQVFDRVICVKSGSRKSLLNVFHDGMCHPKMAMVIDDRSKVWEDKDQPRVHVV 358
Query: 359 PAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPA 418
PAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDEN L+ I+E+F+EDE +LP
Sbjct: 359 PAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENYLQRIAEIFFEDEVGSLPH 418
Query: 419 APDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDL 478
PDVS+YLMSE+ PNG+ NAP+SEG+ G EVERRLNQ D+K D M NS +
Sbjct: 419 PPDVSSYLMSEE---VPNGNGNAPISEGMAGAEVERRLNQPDDKLSADLVSRPMVNSVEF 475
Query: 479 KSETSLLPVAVASNATVPAT---VVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQPPL 535
+ ETS + N P + ++PSQKPGL + + LR Q+SA+PPL
Sbjct: 476 RHETSQPTAGITPNVAGPGSSRPLIPSQKPGL--------TINYEAWSRLRGQSSAEPPL 527
Query: 536 ---PKLHGQGGWIVEEEV-NRVLPNNRPVSIA--TGLP---------------------- 567
P + GGW+V++++ N+ NN P + A + LP
Sbjct: 528 ISRPPIPSYGGWLVDDDISNKTQTNNWPFASAKESNLPKSEKHQAQPKPFSHRMEVSAST 587
Query: 568 ---SHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLLPS 624
S AS+ K EEA D ++N+P S+ E +S NH SSNS++F E GK + PS
Sbjct: 588 VPLSQASKLKAEEATSVSDFQRRNIPSKSRLTEDVISPNHTSSNSKDFQNEVGKFD--PS 645
Query: 625 YLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAE 684
LSIGVLQEIGKRCSSKVEF+ +VSTSKDLQFSVEVLFTGEKIG GMG+TRKDAQQQAAE
Sbjct: 646 -LSIGVLQEIGKRCSSKVEFKPIVSTSKDLQFSVEVLFTGEKIGFGMGRTRKDAQQQAAE 704
Query: 685 NALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRKESTP 744
NAL LAEKY+ ++ P+S A++ +FDKLS+E+ENGFLWD + ES E EDGL++ES
Sbjct: 705 NALRSLAEKYLGHMEPQSKAVNTEFDKLSIEHENGFLWDVVNPESVELQTEDGLQRESAS 764
Query: 745 EASEVEPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLKD 783
EAS+ E + NQQ++KR + PSKRLK+
Sbjct: 765 EASDAETLPLNPNPINQQIEKRAS-------FPSKRLKE 796
>gi|356568068|ref|XP_003552235.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Glycine max]
Length = 806
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/847 (59%), Positives = 596/847 (70%), Gaps = 105/847 (12%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDEN--------FQFPNNEIRIRHISPSSERCIPL 52
MSRLG+K+ VY GD +GELD I +S + F+FPNNEIRI H S SERC PL
Sbjct: 1 MSRLGFKHEVYDGDKHVGELDVIPLSSSSTTTPFHNSFRFPNNEIRIHHFSAKSERCPPL 60
Query: 53 SILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKK 112
SIL T+++F++RCKL+SS EQ LI +HASCFYE KTAVVV+ DEEIHLV+MPSK+KK
Sbjct: 61 SILQTVAAFNVRCKLDSSVATEQKELIAIHASCFYEMKTAVVVVNDEEIHLVSMPSKRKK 120
Query: 113 FPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREP 172
FPCFWC++V GLY++CL MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALR W+ RE
Sbjct: 121 FPCFWCFAVPLGLYDACLAMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLLRET 180
Query: 173 DQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVI 232
D +R GMS+ELKRY++DR LLKQY E+D V+DNGKV+KVQ EE PP S +HE++VRPV+
Sbjct: 181 DPLRVQGMSSELKRYLEDRLLLKQYAESDTVVDNGKVYKVQMEEAPPLSGSHEKLVRPVV 240
Query: 233 RIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEM 292
R+ ERN+VLTRINPE RDTSVLVRLRPAWEDLRSYL AKGRKRFEVYVC
Sbjct: 241 RLQERNIVLTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVC----------- 289
Query: 293 WRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQ 352
SRKSLLNVFQ G+CHPKMAMVIDDR KVWEDKDQ
Sbjct: 290 --------------------------SRKSLLNVFQDGVCHPKMAMVIDDRSKVWEDKDQ 323
Query: 353 PRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDE 412
PRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDE+LL+ I+E+F+ED+
Sbjct: 324 PRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDESLLQRIAEIFFEDD 383
Query: 413 AVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSM 472
LP PDVSNYLMSED PNG+ NAP+SEG+NG EVERRL+Q D+K+ VD M
Sbjct: 384 IGLLPLPPDVSNYLMSED---VPNGNANAPISEGINGAEVERRLSQPDDKFSVDLVTRPM 440
Query: 473 KNSSDLKSETSLLPVAVASNATVPA---TVVPSQKPGLLGAPIRRDNSS----------- 518
NS + + ETS + SN T PA T++PSQKPGLLG P++ D +S
Sbjct: 441 TNSVEFRHETSQPTAGIISNVTGPASSRTLIPSQKPGLLGPPVKHDGNSVDRDYDMRKGL 500
Query: 519 --MKHGFDLRNQNSAQPPL---------PKL-HGQGGWIVEEEV-NRVLPNNRPV----- 560
M+HG D+R Q SA+PPL P L GG +VE+++ +R N+ P
Sbjct: 501 LGMRHGPDIRGQISAEPPLISRPPNQTSPSLIQPFGGGLVEDDIASRTQTNSWPSASFKE 560
Query: 561 ----------------------SIATGLPSHASQAKGEEAIMAHDLHKQNLPPASQ-PPE 597
S LP ASQ K EEA DL + P SQ E
Sbjct: 561 SNVIKFDKHQAQQKPFSHSVIGSSPNVLPPQASQVKTEEATSVSDLQRHIAPSKSQLSSE 620
Query: 598 IGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFS 657
G+SQNH +SNS++F E GK N LPS LSI VLQEIG+RC+SKVEF++++STSKDLQFS
Sbjct: 621 DGISQNHATSNSKDFQNEAGKVNFLPS-LSIQVLQEIGRRCNSKVEFKTILSTSKDLQFS 679
Query: 658 VEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENE 717
VEVLFTGEKIGVGM +TRKDAQQQAAENAL LAEKYVA++ P+ A+D+DFDKLSL +
Sbjct: 680 VEVLFTGEKIGVGMARTRKDAQQQAAENALRSLAEKYVAHVEPQCRAVDKDFDKLSLGRD 739
Query: 718 NGFLWDTIISESNEGLREDGLRKESTPEASEVEPGSTYASLGNQQVQKRPNVP-KLSKLI 776
NGFLWD + ES+E EDG+ +E+ EA + E S+ + NQQ+ KR + P ++ I
Sbjct: 740 NGFLWDVVNLESSELQPEDGVPRENASEALDAETRSSTPNAINQQMDKRVSSPRRMPNSI 799
Query: 777 PSKRLKD 783
PSKRLK+
Sbjct: 800 PSKRLKE 806
>gi|297806101|ref|XP_002870934.1| hypothetical protein ARALYDRAFT_486948 [Arabidopsis lyrata subsp.
lyrata]
gi|297316771|gb|EFH47193.1| hypothetical protein ARALYDRAFT_486948 [Arabidopsis lyrata subsp.
lyrata]
Length = 770
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/774 (61%), Positives = 578/774 (74%), Gaps = 49/774 (6%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDEN-FQFPNNEIRIRHISPSSERCIPLSILHTIS 59
MSRLG+K++VYHGD+ LGELD VS + F+FPN+EIRI H+SP+ ERC PL+IL TI+
Sbjct: 1 MSRLGHKSVVYHGDLRLGELDVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIA 60
Query: 60 SFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCY 119
SF++RCKLESSAPV+ L++LHA CF+E KTAVV++GDEEIHLVAMPSK+KKFPCFWC+
Sbjct: 61 SFAVRCKLESSAPVKPQELMHLHAVCFHELKTAVVLLGDEEIHLVAMPSKEKKFPCFWCF 120
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
SV SGLY+SCL MLN RCL+IVFDLDETLIVANTMKSFEDRIEAL+SWI+RE D +R +G
Sbjct: 121 SVPSGLYDSCLRMLNTRCLSIVFDLDETLIVANTMKSFEDRIEALKSWISREMDPVRING 180
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNL 239
MSAELKRYMDDR LLKQY +ND DNG + K Q EEV P S+ E++ RPVIR+PE+N
Sbjct: 181 MSAELKRYMDDRMLLKQYIDNDYAFDNGVLLKAQPEEVRPTSDGLEKVYRPVIRLPEKNT 240
Query: 240 VLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299
VLTRINPE RDTSVLV+LRPAWE+LRSYL AK RKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 241 VLTRINPEIRDTSVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPE 300
Query: 300 GHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
HLI K+L DR+VCVK ++KSLL+VF G+CHPKMAMVIDDR KVWEDKDQPRVHVVP
Sbjct: 301 AHLISLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRIKVWEDKDQPRVHVVP 360
Query: 360 AFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAA 419
A+ PYYAPQAE + VP+LCVARNVACNVRG FFKEFDE+L+ SIS V+YED+ NLP +
Sbjct: 361 AYLPYYAPQAEASLLVPILCVARNVACNVRGYFFKEFDESLMSSISLVYYEDDVENLPPS 420
Query: 420 PDVSNYLMSEDANFAPNGSTNA-PMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDL 478
PDVSNY++ ED FA NG+ NA PM+EG+ G EVERRLNQS S LP+ N ++
Sbjct: 421 PDVSNYVVIEDPGFASNGNINAPPMTEGMCGGEVERRLNQS--AAADHSTLPATSN-AEQ 477
Query: 479 KSETSLLPVAV---ASNATVPATVVPSQKPGLLGAPIRRDNSS---------MKHGFDLR 526
K ET +AV ++ A ++PS KP LLGAP RRD + M+ G D+R
Sbjct: 478 KPETPKPQIAVIPNNASTATAAALLPSHKPSLLGAP-RRDGLTFSDGGRPLMMRPGVDIR 536
Query: 527 NQNSAQPPL----------PKLHGQGGWIVEEEVNR-------------VLPNNRPVSIA 563
NQN QPP+ +H QGGW+V++E NR P+ P S
Sbjct: 537 NQNFNQPPILAKIPMQPPSSSMHSQGGWLVDDE-NRPSFPGRPSGIYPSQFPHGIPGSAP 595
Query: 564 TGLPSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLLP 623
G +H S + EE M DL +QNL + Q E G+SQNH+ SN RE T+GGK+N
Sbjct: 596 VGSFAHPSHLRSEEVSMDDDLKRQNL--SRQTTEGGLSQNHLVSNGREHHTDGGKSNGGQ 653
Query: 624 SYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA 683
S+L + LQEIG+RC SKVE+R+V+ST+K+LQFSVEVLFTGEKIG+GMGKT+KDA QQAA
Sbjct: 654 SHLFVSALQEIGRRCGSKVEYRTVISTNKELQFSVEVLFTGEKIGIGMGKTKKDAHQQAA 713
Query: 684 ENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDG 737
ENAL LAE YVA++ S ++D EN+NGFLW++ SN+GL E+
Sbjct: 714 ENALRSLAENYVAHVALLSRETEKD-----PENDNGFLWESSEDVSNKGLEEEA 762
>gi|334187353|ref|NP_001190199.1| RNA polymerase II C-terminal domain phosphatase-like 2 [Arabidopsis
thaliana]
gi|332002938|gb|AED90321.1| RNA polymerase II C-terminal domain phosphatase-like 2 [Arabidopsis
thaliana]
Length = 774
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/774 (61%), Positives = 577/774 (74%), Gaps = 49/774 (6%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDEN-FQFPNNEIRIRHISPSSERCIPLSILHTIS 59
M+RLG+K++VYHGD+ LGELD VS + F+FPN+EIRI H+SP+ ERC PL+IL TI+
Sbjct: 1 MNRLGHKSVVYHGDLRLGELDVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIA 60
Query: 60 SFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCY 119
SF++RCKLESSAPV+ L++LHA CF+E KTAVV++GDEEIHLVAMPSK+KKFPCFWC+
Sbjct: 61 SFAVRCKLESSAPVKSQELMHLHAVCFHELKTAVVMLGDEEIHLVAMPSKEKKFPCFWCF 120
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
SV SGLY+SCL MLN RCL+IVFDLDETLIVANTMKSFEDRIEAL+SWI+RE D +R +G
Sbjct: 121 SVPSGLYDSCLRMLNTRCLSIVFDLDETLIVANTMKSFEDRIEALKSWISREMDPVRING 180
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNL 239
MSAELKRYMDDR LLKQY +ND DNG + K Q EEV P S+ E++ RPVIR+PE+N
Sbjct: 181 MSAELKRYMDDRMLLKQYIDNDYAFDNGVLLKAQPEEVRPTSDGQEKVCRPVIRLPEKNT 240
Query: 240 VLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299
VLTRI PE RDTSVLV+LRPAWE+LRSYL AK RKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 241 VLTRIKPEIRDTSVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPE 300
Query: 300 GHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
HLI K+L DR+VCVK ++KSLL+VF G+CHPKMAMVIDDR KVWEDKDQPRVHVV
Sbjct: 301 AHLISLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQPRVHVVS 360
Query: 360 AFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAA 419
A+ PYYAPQAETA VP LCVARNVACNVRG FFKEFDE+L+ SIS V+YED+ NLP +
Sbjct: 361 AYLPYYAPQAETALVVPHLCVARNVACNVRGYFFKEFDESLMSSISLVYYEDDVENLPPS 420
Query: 420 PDVSNYLMSEDANFAPNGSTNA-PMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDL 478
PDVSNY++ ED FA NG+ NA P++EG+ G EVERRLNQ+ S LP+ N ++
Sbjct: 421 PDVSNYVVIEDPGFASNGNINAPPINEGMCGGEVERRLNQA--AAADHSTLPATSN-AEQ 477
Query: 479 KSETSLLPVAV---ASNATVPATVVPSQKPGLLGAPIRRDNSS---------MKHGFDLR 526
K ET +AV ++ A ++PS KP LLGAP RRD + M+ G D+R
Sbjct: 478 KPETPKPQIAVIPNNASTATAAALLPSHKPSLLGAP-RRDGFTFSDGGRPLMMRPGVDIR 536
Query: 527 NQNSAQPPL----------PKLHGQGGWIVEEEVNR-------------VLPNNRPVSIA 563
NQN QPP+ +H GGW+V++E NR P+ P S
Sbjct: 537 NQNFNQPPILAKIPMQPPSSSMHSPGGWLVDDE-NRPSFPGRPSGLYPSQFPHGTPGSAP 595
Query: 564 TGLPSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLLP 623
G +H S + EE M DL +QN P+ Q E G+SQNH+ SN RE T+GGK+N
Sbjct: 596 VGPFAHPSHLRSEEVAMDDDLKRQN--PSRQTTEGGISQNHLVSNGREHHTDGGKSNGGQ 653
Query: 624 SYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA 683
S+L + LQEIG+RC SKVEFR+V+ST+K+LQFSVEVLFTGEKIG+GM KT+KDA QQAA
Sbjct: 654 SHLFVSALQEIGRRCGSKVEFRTVISTNKELQFSVEVLFTGEKIGIGMAKTKKDAHQQAA 713
Query: 684 ENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDG 737
ENAL LAEKYVA++ P + R+ +K EN+NGFLW++ SN+GL E+
Sbjct: 714 ENALRSLAEKYVAHVAP----LARETEK-GPENDNGFLWESSEDVSNKGLEEEA 762
>gi|79503115|ref|NP_195747.2| RNA polymerase II C-terminal domain phosphatase-like 2 [Arabidopsis
thaliana]
gi|357529528|sp|Q5YDB5.3|CPL2_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like
2; Short=FCP-like 2; AltName: Full=Carboxyl-terminal
phosphatase-like 2; Short=AtCPL2; Short=CTD
phosphatase-like 2
gi|49175307|gb|AAT52023.1| C-terminal domain phosphatase-like 2 [Arabidopsis thaliana]
gi|332002937|gb|AED90320.1| RNA polymerase II C-terminal domain phosphatase-like 2 [Arabidopsis
thaliana]
Length = 770
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/774 (61%), Positives = 577/774 (74%), Gaps = 49/774 (6%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDEN-FQFPNNEIRIRHISPSSERCIPLSILHTIS 59
M+RLG+K++VYHGD+ LGELD VS + F+FPN+EIRI H+SP+ ERC PL+IL TI+
Sbjct: 1 MNRLGHKSVVYHGDLRLGELDVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIA 60
Query: 60 SFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCY 119
SF++RCKLESSAPV+ L++LHA CF+E KTAVV++GDEEIHLVAMPSK+KKFPCFWC+
Sbjct: 61 SFAVRCKLESSAPVKSQELMHLHAVCFHELKTAVVMLGDEEIHLVAMPSKEKKFPCFWCF 120
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
SV SGLY+SCL MLN RCL+IVFDLDETLIVANTMKSFEDRIEAL+SWI+RE D +R +G
Sbjct: 121 SVPSGLYDSCLRMLNTRCLSIVFDLDETLIVANTMKSFEDRIEALKSWISREMDPVRING 180
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNL 239
MSAELKRYMDDR LLKQY +ND DNG + K Q EEV P S+ E++ RPVIR+PE+N
Sbjct: 181 MSAELKRYMDDRMLLKQYIDNDYAFDNGVLLKAQPEEVRPTSDGQEKVCRPVIRLPEKNT 240
Query: 240 VLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299
VLTRI PE RDTSVLV+LRPAWE+LRSYL AK RKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 241 VLTRIKPEIRDTSVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPE 300
Query: 300 GHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
HLI K+L DR+VCVK ++KSLL+VF G+CHPKMAMVIDDR KVWEDKDQPRVHVV
Sbjct: 301 AHLISLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQPRVHVVS 360
Query: 360 AFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAA 419
A+ PYYAPQAETA VP LCVARNVACNVRG FFKEFDE+L+ SIS V+YED+ NLP +
Sbjct: 361 AYLPYYAPQAETALVVPHLCVARNVACNVRGYFFKEFDESLMSSISLVYYEDDVENLPPS 420
Query: 420 PDVSNYLMSEDANFAPNGSTNA-PMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDL 478
PDVSNY++ ED FA NG+ NA P++EG+ G EVERRLNQ+ S LP+ N ++
Sbjct: 421 PDVSNYVVIEDPGFASNGNINAPPINEGMCGGEVERRLNQA--AAADHSTLPATSN-AEQ 477
Query: 479 KSETSLLPVAV---ASNATVPATVVPSQKPGLLGAPIRRDNSS---------MKHGFDLR 526
K ET +AV ++ A ++PS KP LLGAP RRD + M+ G D+R
Sbjct: 478 KPETPKPQIAVIPNNASTATAAALLPSHKPSLLGAP-RRDGFTFSDGGRPLMMRPGVDIR 536
Query: 527 NQNSAQPPL----------PKLHGQGGWIVEEEVNR-------------VLPNNRPVSIA 563
NQN QPP+ +H GGW+V++E NR P+ P S
Sbjct: 537 NQNFNQPPILAKIPMQPPSSSMHSPGGWLVDDE-NRPSFPGRPSGLYPSQFPHGTPGSAP 595
Query: 564 TGLPSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLLP 623
G +H S + EE M DL +QN P+ Q E G+SQNH+ SN RE T+GGK+N
Sbjct: 596 VGPFAHPSHLRSEEVAMDDDLKRQN--PSRQTTEGGISQNHLVSNGREHHTDGGKSNGGQ 653
Query: 624 SYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAA 683
S+L + LQEIG+RC SKVEFR+V+ST+K+LQFSVEVLFTGEKIG+GM KT+KDA QQAA
Sbjct: 654 SHLFVSALQEIGRRCGSKVEFRTVISTNKELQFSVEVLFTGEKIGIGMAKTKKDAHQQAA 713
Query: 684 ENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDG 737
ENAL LAEKYVA++ P + R+ +K EN+NGFLW++ SN+GL E+
Sbjct: 714 ENALRSLAEKYVAHVAP----LARETEK-GPENDNGFLWESSEDVSNKGLEEEA 762
>gi|6759450|emb|CAB69855.1| hypothetical protein [Arabidopsis thaliana]
Length = 771
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/775 (61%), Positives = 576/775 (74%), Gaps = 50/775 (6%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDEN-FQFPNNEIRIRHISPSSERCIPLSILHTIS 59
M+RLG+K++VYHGD+ LGELD VS + F+FPN+EIRI H+SP+ ERC PL+IL TI+
Sbjct: 1 MNRLGHKSVVYHGDLRLGELDVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIA 60
Query: 60 SFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCY 119
SF++RCKLESSAPV+ L++LHA CF+E KTAVV++GDEEIHLVAMPSK+KKFPCFWC+
Sbjct: 61 SFAVRCKLESSAPVKSQELMHLHAVCFHELKTAVVMLGDEEIHLVAMPSKEKKFPCFWCF 120
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
SV SGLY+SCL MLN RCL+IVFDLDETLIVANTMKSFEDRIEAL+SWI+RE D +R +G
Sbjct: 121 SVPSGLYDSCLRMLNTRCLSIVFDLDETLIVANTMKSFEDRIEALKSWISREMDPVRING 180
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNL 239
MSAELKRYMDDR LLKQY +ND DNG + K Q EEV P S+ E++ RPVIR+PE+N
Sbjct: 181 MSAELKRYMDDRMLLKQYIDNDYAFDNGVLLKAQPEEVRPTSDGQEKVCRPVIRLPEKNT 240
Query: 240 VLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299
VLTRI PE RDTSVLV+LRPAWE+LRSYL AK RKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 241 VLTRIKPEIRDTSVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPE 300
Query: 300 GHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
HLI K+L DR+VCVK ++KSLL+VF G+CHPKMAMVIDDR KVWEDKDQPRVHVV
Sbjct: 301 AHLISLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQPRVHVVS 360
Query: 360 AFTPYYAPQAET-ANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPA 418
A+ PYYAPQAE A VP LCVARNVACNVRG FFKEFDE+L+ SIS V+YED+ NLP
Sbjct: 361 AYLPYYAPQAEACALVVPHLCVARNVACNVRGYFFKEFDESLMSSISLVYYEDDVENLPP 420
Query: 419 APDVSNYLMSEDANFAPNGSTNA-PMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSD 477
+PDVSNY++ ED FA NG+ NA P++EG+ G EVERRLNQ+ S LP+ N ++
Sbjct: 421 SPDVSNYVVIEDPGFASNGNINAPPINEGMCGGEVERRLNQA--AAADHSTLPATSN-AE 477
Query: 478 LKSETSLLPVAV---ASNATVPATVVPSQKPGLLGAPIRRDNSS---------MKHGFDL 525
K ET +AV ++ A ++PS KP LLGAP RRD + M+ G D+
Sbjct: 478 QKPETPKPQIAVIPNNASTATAAALLPSHKPSLLGAP-RRDGFTFSDGGRPLMMRPGVDI 536
Query: 526 RNQNSAQPPL----------PKLHGQGGWIVEEEVNR-------------VLPNNRPVSI 562
RNQN QPP+ +H GGW+V++E NR P+ P S
Sbjct: 537 RNQNFNQPPILAKIPMQPPSSSMHSPGGWLVDDE-NRPSFPGRPSGLYPSQFPHGTPGSA 595
Query: 563 ATGLPSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLL 622
G +H S + EE M DL +QN P+ Q E G+SQNH+ SN RE T+GGK+N
Sbjct: 596 PVGPFAHPSHLRSEEVAMDDDLKRQN--PSRQTTEGGISQNHLVSNGREHHTDGGKSNGG 653
Query: 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQA 682
S+L + LQEIG+RC SKVEFR+V+ST+K+LQFSVEVLFTGEKIG+GM KT+KDA QQA
Sbjct: 654 QSHLFVSALQEIGRRCGSKVEFRTVISTNKELQFSVEVLFTGEKIGIGMAKTKKDAHQQA 713
Query: 683 AENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDG 737
AENAL LAEKYVA++ P + R+ +K EN+NGFLW++ SN+GL E+
Sbjct: 714 AENALRSLAEKYVAHVAP----LARETEK-GPENDNGFLWESSEDVSNKGLEEEA 763
>gi|224090981|ref|XP_002309133.1| predicted protein [Populus trichocarpa]
gi|222855109|gb|EEE92656.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/662 (62%), Positives = 479/662 (72%), Gaps = 79/662 (11%)
Query: 91 TAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIV 150
TAVV+IGDEEIHLVAMPSKQKKFPC+WC++ GLYNSCL MLN+RCL+IVFDLDETLIV
Sbjct: 11 TAVVLIGDEEIHLVAMPSKQKKFPCYWCFAAPVGLYNSCLRMLNMRCLSIVFDLDETLIV 70
Query: 151 ANTMKSFEDRIEALRSWIARE-PDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKV 209
ANTMKSFEDRIEALR WIA+ D +R SGM AE+KRY+DDR LLKQY E+D VMDNGK
Sbjct: 71 ANTMKSFEDRIEALRVWIAQSIMDPMRVSGMYAEMKRYIDDRLLLKQYIESDVVMDNGKT 130
Query: 210 FKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLI 269
+KVQ EEV S+ HER+VRPVIR+PE+N+VLT IN E +R AWEDLRSYL
Sbjct: 131 YKVQLEEVLRLSDGHERVVRPVIRLPEKNIVLTCINSE---------IRSAWEDLRSYLT 181
Query: 270 AKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR---VVCVKSGSRKSL-LN 325
AKGRKRFEVYVCTMAERD ALEMWRLLDPE HLI SKQL DR VVCVKSG + + +
Sbjct: 182 AKGRKRFEVYVCTMAERDCALEMWRLLDPEAHLIASKQLSDRSDRVVCVKSGKLQEMFIK 241
Query: 326 VFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVA 385
R +CHPKMAMVIDDR KVWED DQPRVHVVPAFTPYY PQAETANA+PVLCVARNVA
Sbjct: 242 CLPRCMCHPKMAMVIDDRLKVWEDMDQPRVHVVPAFTPYYVPQAETANAIPVLCVARNVA 301
Query: 386 CNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSE 445
CNVRGCFFKEF E L+R +SEVFYEDE +LP PDVSNY+M+ED+ F PNG++NAP SE
Sbjct: 302 CNVRGCFFKEFVEILIRRMSEVFYEDEVKSLPPPPDVSNYMMAEDSGFVPNGNSNAPFSE 361
Query: 446 GLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKSETSLLPVAVASNA---TVPATVVPS 502
G++ +E ERR +QSD+K V+D S+ NS++++SE PVA+ N T A ++PS
Sbjct: 362 GMSDIEAERRWHQSDDKNVMDPVTHSITNSAEVRSEIPQPPVALIPNIVGLTSSARLLPS 421
Query: 503 QKPGLLGAPIRRDNSSMKHGFDLRNQNSAQPPL----------PKLHGQGGWIVEEEVNR 552
QKP LLGAP+R+ DL NQ+S QPPL L QG W+VEE++ +
Sbjct: 422 QKPSLLGAPVRQ---------DLSNQSSGQPPLLSRVPVAISSSTLQLQGCWLVEEDIGK 472
Query: 553 VLPNNRPVSIA---------------------------TGLPSHASQAKGEE-------- 577
N RP +IA +G S AS++K EE
Sbjct: 473 AESNYRPSAIAQELDSLKSDKLRGTQNPFAHGASAYASSGFVSPASESKDEEKLSKIFVY 532
Query: 578 --AIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIG 635
A+ +D+HKQ LP E+GVSQNHVSS+SREF E GK NLLPS+LSIGVLQEIG
Sbjct: 533 LLALAGNDMHKQYLPAG----EVGVSQNHVSSSSREFQAEAGKFNLLPSHLSIGVLQEIG 588
Query: 636 KRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKD--AQQQAAENALHYLAEK 693
+ C SKVEF+SVVSTSKDLQFSVEVLFTGEKIGVGMG TRKD Q AAENAL LA K
Sbjct: 589 QGCRSKVEFKSVVSTSKDLQFSVEVLFTGEKIGVGMGTTRKDAQQQAAAAENALRSLAGK 648
Query: 694 YV 695
+
Sbjct: 649 SI 650
>gi|356555137|ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Glycine max]
Length = 958
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/802 (47%), Positives = 501/802 (62%), Gaps = 93/802 (11%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
+++VYHG++ +GE++ +N EIRI H S SERC PL++LHTI+SF + K
Sbjct: 3 RSMVYHGEMEVGEVEIYPEEKKNIDL--KEIRISHFSQPSERCPPLAVLHTITSFGICFK 60
Query: 67 LESSAPV---EQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSS 123
+ESS +Q L +LH+SC E KTAV+ + EEIHLVAM S+ PCFW + V+S
Sbjct: 61 MESSTSQTRQQQDVLFHLHSSCIRENKTAVMPLRGEEIHLVAMYSRNNDRPCFWGFIVAS 120
Query: 124 GLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAE 183
GLYNSCL MLNLRCL IVFDLDETL+VANTM+SFED+IE L + E + R S M AE
Sbjct: 121 GLYNSCLTMLNLRCLGIVFDLDETLVVANTMRSFEDKIEVLHRKMNSEVNPQRISTMQAE 180
Query: 184 LKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTR 243
+KRY+DD+ +LK+Y END V+DNGKV K+Q E VP S++H+ IVRP+IR+ E+N++LTR
Sbjct: 181 IKRYLDDKNILKEYAENDQVVDNGKVIKIQSEIVPALSDSHQPIVRPLIRLQEKNIILTR 240
Query: 244 INPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLI 303
INP+ RDTSVLVRLRPAWEDLRSYL A+GRKRFEV+VCTMAERDYALEMWRLLDPE +LI
Sbjct: 241 INPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVFVCTMAERDYALEMWRLLDPELNLI 300
Query: 304 GSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTP 363
SK+LLDR+VCVKSG +KSL NVFQ GLCH KMA+VIDDR KVW++KDQP+VHVVPAF P
Sbjct: 301 NSKELLDRIVCVKSGLKKSLFNVFQNGLCHLKMALVIDDRLKVWDEKDQPQVHVVPAFAP 360
Query: 364 YYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVS 423
YYAPQAE +NAVP LC+AR+VACNVRG FFK+FD+ LL+ I + YED+ ++P+ PDVS
Sbjct: 361 YYAPQAEASNAVPTLCLARSVACNVRGGFFKDFDDGLLQKIPLIAYEDDIKDIPSPPDVS 420
Query: 424 NYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSD--LKSE 481
NYL+SED A NG+ N + +G+ EVERRL + S +P+M + D L
Sbjct: 421 NYLVSEDDASASNGNKNLLLFDGMADAEVERRLK---DAISASSTVPAMTTNLDPRLAFN 477
Query: 482 TSLLPVAVASNATVPATVVPSQ----------KPGLLGAPI------------------- 512
+SL V+S+ TVP + +P L PI
Sbjct: 478 SSLQYTMVSSSGTVPPPTAQASIVQFGNVQFPQPNTLVKPICQVTPPGPSLHSSPAREEG 537
Query: 513 -----------RRDNSSMKHGFDLRNQNSAQPPLPKLH----------GQGGWI-VEEE- 549
RR ++HG D R S++PPLP H + GW VEEE
Sbjct: 538 EVPESELDLDTRRRLLILQHGQDTREHTSSEPPLPVRHPTQVSAPSVPSRRGWFSVEEEM 597
Query: 550 ----VNRVLPNNRPV-----------------------SIATGLPSHASQAKGEEAIMAH 582
+N+++P PV S+++ H S + + +
Sbjct: 598 GPQQLNQLVPKEFPVGSEPLHIEKRWPRHPSLFSKVDDSVSSDRVFHESHQRLPKEVHHR 657
Query: 583 DLHK---QNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCS 639
D H Q+L P + + S ++R+F +E G++ L + ++ GVLQEI +C
Sbjct: 658 DDHSRLSQSLSSYHSFPGDDIPLSGSSYSNRDFDSESGRS-LFHADITAGVLQEIALKCG 716
Query: 640 SKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYIT 699
+KVEF S + S LQFS+E F G+K+G G G+TR++AQ +AAE ++ LA+ Y+++
Sbjct: 717 TKVEFLSSLVASTALQFSIEAWFAGKKVGEGFGRTRREAQNKAAECSIKQLADIYMSHAK 776
Query: 700 PRSGAMDRDFDKLSLENENGFL 721
SG+ D N NGF+
Sbjct: 777 DDSGSTYGDVSGFHGSNNNGFV 798
>gi|255555995|ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223541695|gb|EEF43243.1| double-stranded RNA binding protein, putative [Ricinus communis]
Length = 978
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/829 (47%), Positives = 509/829 (61%), Gaps = 125/829 (15%)
Query: 6 YKNIVYHGDVCLGELDTIL-----------------------VSDENFQFPNNEIRIRHI 42
YK++VY GD LGE++ V DE + IRI H
Sbjct: 2 YKSVVYKGDELLGEVEIYAQQEQKLQQQEELQEQEQELKKKRVIDEILK----GIRISHF 57
Query: 43 SPSSERCIPLSILHTISSFSLRCKLES--SAPVEQP-HLINLHASCFYEFKTAVVVI-GD 98
S +SERC PL++LHTI++ + K+ES S ++ P HL LH+SC E KTAVV++ G
Sbjct: 58 SQASERCPPLAVLHTITTNGICFKMESKNSVSLDTPLHL--LHSSCIQESKTAVVLLQGG 115
Query: 99 EEIHLVAMPSK--QKKFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKS 156
EE+HLVAM S+ ++++PCFW +++SSGLY+SCL MLNLRCL IVFDLDETLIVANTM+S
Sbjct: 116 EELHLVAMFSRNDERQYPCFWAFNISSGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRS 175
Query: 157 FEDRIEALRSWIAREPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEE 216
FEDRIEAL+ I+ E D R SGM +E+KRY DD+T+LKQY +ND V++NG+V K Q E
Sbjct: 176 FEDRIEALQRKISTELDPQRISGMLSEVKRYQDDKTILKQYVDNDQVVENGRVIKTQFEV 235
Query: 217 VPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRF 276
VP S+NH+ IVRP+IR+ ERN++LTRINP+ RDTSVLVRLRPAWE+LRSYL A+GRKRF
Sbjct: 236 VPALSDNHQTIVRPLIRLQERNIILTRINPQIRDTSVLVRLRPAWEELRSYLTARGRKRF 295
Query: 277 EVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKM 336
EVYVCTMAERDYALEMWRLLDPE +LI SK+LLDR+VCVKSG RKSL NVFQ G+CHPKM
Sbjct: 296 EVYVCTMAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKM 355
Query: 337 AMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEF 396
A+VIDDR KVW++KDQPRVHVVPAF PYYAPQAE NAVPVLCVARNVACNVRG FFKEF
Sbjct: 356 ALVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEF 415
Query: 397 DENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRL 456
DE LL+ I E+ +ED+ ++P+ PDVSNYL+ ED F NG+ + +G+ EVE+RL
Sbjct: 416 DEGLLQRIPEISFEDDMNDIPSPPDVSNYLVPEDDAFTSNGNRDPLSFDGMADAEVEKRL 475
Query: 457 NQSDEKYVVDSGLPSMKNSSDLK---------SETSLLPVAVASNATVP----------- 496
E + S PS + D + + +S +PV + A V
Sbjct: 476 K---EAISISSAFPSTVANLDARLVPPLQYTMASSSSIPVPTSQPAVVTFPSMQLPQAAP 532
Query: 497 -----ATVVPSQKPGLLGAPIRRDNSS---------------MKHGFDLRN--------- 527
VVPS+ P L +P R + ++HG DLR+
Sbjct: 533 LVKPLGQVVPSE-PSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDLRDPAPSESPFP 591
Query: 528 ---QNSAQPPLPKLHGQGGWI-VEEE---------VNRVLP-NNRPVSIATGLPSHAS-Q 572
NS Q +P++ +G W+ VEEE V R P + P+ I P H S
Sbjct: 592 VRPSNSMQVSVPRVQSRGNWVPVEEEMSPRQLNRAVTREFPMDTEPMHIDKHRPHHPSFF 651
Query: 573 AKGEEAI----MAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTN-------- 620
K E +I M H+ Q LP + + + N SN + E +
Sbjct: 652 PKVESSIPSERMPHE--NQRLPKVAPYKDDRLRLNQTMSNYQSLSGEENSLSRSSSSNRD 709
Query: 621 --------LLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMG 672
+ + + VL EI +C +KVEF+ + S+DLQFSVE F GE++G G G
Sbjct: 710 LDVESDRAVSSAETPVRVLHEISMKCGAKVEFKHSLVNSRDLQFSVEAWFAGERVGEGFG 769
Query: 673 KTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFL 721
+TR++AQ AAE ++ LA Y++ P +GA+ D K S N+NGFL
Sbjct: 770 RTRREAQSVAAEASIKNLANIYISRAKPDNGALHGDASKYSSANDNGFL 818
>gi|449433867|ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Cucumis sativus]
gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 1-like [Cucumis sativus]
Length = 803
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/800 (48%), Positives = 504/800 (63%), Gaps = 99/800 (12%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQFPN---NEIRIRHISPSSERCIPLSILHTISSFS 62
YK++VYHGD LG+++ + +E + N EIRI H S SERC PL++LHTI++
Sbjct: 2 YKSVVYHGDELLGDVE--IYPEEKNGYKNIEVKEIRITHFSQPSERCPPLAVLHTIAASG 59
Query: 63 LRCKLESSAPVEQPHLINL-HASCFYEFKTAVVVIGDEEIHLVAMPSKQ--KKFPCFWCY 119
+ K+ES Q +NL H+SC E KTA+++ G EE+HLVAM S+ K++PCFW +
Sbjct: 60 ICFKMESKTSQSQDTPLNLLHSSCIMENKTAIMMFGVEELHLVAMFSRDLDKQYPCFWGF 119
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
+V+ GLYNSCL MLNLRCL IVFDLDETL+VANTM+SFEDRIEAL+ I+ E D RA+G
Sbjct: 120 NVAMGLYNSCLDMLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKISSEVDPQRANG 179
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNL 239
M AE+KRY DD+ +LKQY END V++NGKV K Q E VP S+NH+ +VRP+IR+ E+N+
Sbjct: 180 MLAEVKRYQDDKIILKQYAENDQVIENGKVIKSQSEVVPALSDNHQPVVRPLIRLHEKNI 239
Query: 240 VLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299
+LTRINP+ RDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDP+
Sbjct: 240 ILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPD 299
Query: 300 GHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
+LI K+LLDR+VCVKSGSRKSL NVFQ G CHPKMA+VIDDR KVW++KDQPRVHVVP
Sbjct: 300 SNLINPKELLDRIVCVKSGSRKSLFNVFQDGFCHPKMALVIDDRLKVWDEKDQPRVHVVP 359
Query: 360 AFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAA 419
AF PYYAP AE NA+PVLCVARNVACNVRG FFKEFD+ LL+ IS++ YED+ ++P+
Sbjct: 360 AFAPYYAPNAEGNNAIPVLCVARNVACNVRGGFFKEFDDILLQKISDISYEDDVNDIPSP 419
Query: 420 PDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLK 479
PDVSNYL+SED NG+ + P +G+ +EV+RR+ + ++ S + NS+D +
Sbjct: 420 PDVSNYLVSEDEYSIANGNKDMPTFDGMPDMEVDRRMKDA---FLASSTI----NSADPR 472
Query: 480 SETSLLPVAVAS--------NATVP-------------ATVVPSQKPGLLGAPIRRDNSS 518
+ +A AS T+P A V P++ P L +P R +
Sbjct: 473 VSSLQYTMASASCSVPLPPKQVTMPYFPNMPLPHVNSVAHVAPNE-PSLQSSPAREEGEV 531
Query: 519 ---------------MKHGFDLRNQNSAQ-------PPL-----PKLHGQGGWIVEEE-- 549
++HG D R + S++ PPL P+ +G W EE
Sbjct: 532 PESELDPDTRRRLLILQHGQDTRERLSSEPAFPARPPPLQQVAAPRAQSRGNWSPMEEEM 591
Query: 550 ----VNRVLPNNRPV------------------------SIATGLPSHASQAKGEEAIMA 581
+NR + PV SI H +Q +EA
Sbjct: 592 SPRQLNRSARKDFPVDAEPMPMREKHRSNHPSFFAKVDNSILPDRIPHDNQRLPKEAFYR 651
Query: 582 HDLHKQNLPPASQPPEIG--VSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCS 639
D + + P+S P G + N SS SR+ E G++ + S +G LQEI +
Sbjct: 652 DDRMRVSRRPSSYPAFSGEEIPMNQSSSRSRDDDIESGRS--IWSETPVGALQEIAMKFG 709
Query: 640 SKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYIT 699
+KVEF+ + S DLQFSVE F GEKIG G+G TR+DAQ+QAAE ++ LA YV+
Sbjct: 710 TKVEFKPGLVPSTDLQFSVEAWFVGEKIGEGIGHTRRDAQRQAAEGSIKNLANIYVSRCK 769
Query: 700 PRSGAMDRDFDKLSLENENG 719
+ + D +K +N +G
Sbjct: 770 ADPSSAN-DMNKFPSDNGSG 788
>gi|356549363|ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Glycine max]
Length = 960
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/804 (47%), Positives = 501/804 (62%), Gaps = 98/804 (12%)
Query: 8 NIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCKL 67
++VYHG++ +GE+ + +EN EIRI H S SERC PL++LHTI+SF + K+
Sbjct: 4 SMVYHGEMAVGEVK--IYPEENKNMDLKEIRISHFSQPSERCPPLAVLHTITSFGICFKM 61
Query: 68 ESSAPV---EQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSG 124
ESS +Q L +LH+SC E KTAV+ + EEIHLVAM S+ PCFW + V+SG
Sbjct: 62 ESSTSQKRQQQDALFHLHSSCIRENKTAVMPVRGEEIHLVAMYSRNNDRPCFWGFIVASG 121
Query: 125 LYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAEL 184
LYNSCL MLNLRCL IVFDLDETL+VANTM+SFED+IE L + E + + S M AE+
Sbjct: 122 LYNSCLTMLNLRCLGIVFDLDETLVVANTMRSFEDKIEVLHRKMNSEVNPQQISAMQAEI 181
Query: 185 KRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRI 244
KRY+DD+ +LK+Y END V+DNGKV K+Q E VP S++H+ IVRP+IR+ E+N++LTRI
Sbjct: 182 KRYLDDKNILKEYAENDQVVDNGKVIKIQSESVPALSDSHQPIVRPLIRLQEKNIILTRI 241
Query: 245 NPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIG 304
NP+ RDTSVLVRLRPAWEDLRSYL A+GRKRFEV+VCTMAERDYALEMWRLLDPE +LI
Sbjct: 242 NPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVFVCTMAERDYALEMWRLLDPELNLIN 301
Query: 305 SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364
SK+LLDR+VCVKSG +KSL NVFQ GLCH KMA+VIDDR KVW++KDQPRVHVVPAF PY
Sbjct: 302 SKELLDRIVCVKSGLKKSLFNVFQNGLCHLKMALVIDDRLKVWDEKDQPRVHVVPAFAPY 361
Query: 365 YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424
Y PQAE +NAVP LC+ARNVACNVRG FFK+FD+ LL+ I + YED+ ++P +PDVSN
Sbjct: 362 YTPQAEASNAVPFLCLARNVACNVRGGFFKDFDDGLLQKIPLIAYEDDIKDIP-SPDVSN 420
Query: 425 YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSD--LKSET 482
YL+SED A NG+ N + +G+ EVERRL + S + ++ + D L +
Sbjct: 421 YLVSEDDASASNGNKNLLLFDGMADAEVERRLK---DAISASSTILALTANIDPRLAFTS 477
Query: 483 SLLPVAVASNATVP-----ATVVP----------------SQ--KPGL------------ 507
SL V+S+ TVP A+VV SQ PGL
Sbjct: 478 SLQYTMVSSSGTVPPPTAQASVVQFGNVQFPQPNTLVKPMSQVTHPGLSLHSSPAREEGE 537
Query: 508 -----LGAPIRRDNSSMKHGFDLRNQNSAQPPLPKLH------------GQGGWI-VEEE 549
L RR ++HG D R + +++PP P H + GW VEEE
Sbjct: 538 LPESELDLDTRRRFLILQHGQDTRERMASEPPFPVRHPAQVSAPASSVPSRRGWFSVEEE 597
Query: 550 -----VNRVLPNNRPVS-----IATGLPSHAS-QAKGEEAIMA----HDLHKQNLPPASQ 594
+N +P PV I P H S +K ++I + H+ H Q LP
Sbjct: 598 MGPQQLNLPVPKEFPVDSEPFHIEKRWPRHPSFFSKVGDSISSDRVFHESH-QRLPKEVH 656
Query: 595 P-----------------PEIGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKR 637
P + + S ++R+F +E G++ L + + GVLQEI
Sbjct: 657 HRDDRSRLSQSLSSYHSLPGDDIPLSGSSYSNRDFDSESGRS-LFHADTTAGVLQEIALN 715
Query: 638 CSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAY 697
C +KVEF S + S +LQFS+E F G+KIG G G+TR++AQ +AA ++ LA+ Y+++
Sbjct: 716 CGTKVEFLSSLVASTELQFSIEAWFAGKKIGEGFGRTRREAQSKAAGCSIKQLADIYMSH 775
Query: 698 ITPRSGAMDRDFDKLSLENENGFL 721
SG+ D N +GF+
Sbjct: 776 AKDDSGSTYGDVSGFHGSNNDGFV 799
>gi|356521333|ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Glycine max]
Length = 954
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/797 (48%), Positives = 504/797 (63%), Gaps = 85/797 (10%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQ-FPNNEIRIRHISPSSERCIPLSILHTISSFSLR 64
YK++VY G+V +GE+D + N++ F EIRI H S SERC PL++LHT++S +
Sbjct: 2 YKSVVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPLAVLHTVTSCGVC 61
Query: 65 CKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSG 124
K+ES +Q L LH+ C E KTAV+ +G EEIHLVAM S+ PCFW + V+ G
Sbjct: 62 FKMESKT-QQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNVDRPCFWGFIVALG 120
Query: 125 LYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAEL 184
LY+SCL MLNLRCL IVFDLDETLIVANTM+SFEDRI+AL+ I E D R SGM AE+
Sbjct: 121 LYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISGMQAEV 180
Query: 185 KRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRI 244
KRY DD+ +LKQY END V+DNG+V KVQ E VP S++H+ IVRP+IR+ ++N++LTRI
Sbjct: 181 KRYQDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKNIILTRI 240
Query: 245 NPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIG 304
NP+ RDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDP+ +LI
Sbjct: 241 NPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSNLIN 300
Query: 305 SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364
SK+LL R+VCVKSG +KSL NVFQ GLCHPKMA+VIDDR KVW++KDQPRVHVVPAF PY
Sbjct: 301 SKELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPY 360
Query: 365 YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424
YAPQAE +N +PVLCVARNVACNVRG FFK+FD+ LL+ I ++ YED+ ++P+ PDVSN
Sbjct: 361 YAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPSPPDVSN 420
Query: 425 YLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYV--------VDSGLPSMKNSS 476
YL+SED NG + + +G+ EVER+L + +D L S++ +
Sbjct: 421 YLVSEDDGSISNGHRDPFLFDGMADAEVERKLKDALSAASTIPVTTANLDPRLTSLQYTM 480
Query: 477 DLKSETSLLPVAVASNATV-------PATVV-------PSQKPGLLGAPIRRDNSS---- 518
+ S + P A AS PAT+V PS+ P L +P R +
Sbjct: 481 -VPSGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSE-PSLHSSPAREEGEVPESE 538
Query: 519 -----------MKHGFDLRNQNSAQPPLPKLH-----------GQGGWIVEEE------V 550
++HG D R+ SA+PP P H +G W EE +
Sbjct: 539 LDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQTSAPHVPSSRGVWFPAEEEIGSQPL 598
Query: 551 NRVLP-----NNRPVSIATGLPSHAS-QAKGEEAI----MAHDLHKQNLPPASQPPEIGV 600
NRV+P ++ P+ IA P H S +K E +I + HD H Q LP +
Sbjct: 599 NRVVPKEFPVDSGPLGIAKPRPHHPSFFSKVESSISSDRILHDSH-QRLPKEMYHRDDRP 657
Query: 601 SQNHVSSNSREF----------------LTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEF 644
NH+ S+ R F L ++L + + VLQEI +C +KV+F
Sbjct: 658 RLNHMLSSYRSFSGDDIPFSRSFSSHRDLDSESGHSVLHADTPVAVLQEIALKCGTKVDF 717
Query: 645 RSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGA 704
S + S +LQFS+E F+G+KIG +G+TRK+AQ +AAE+++ +LA+ Y++ G+
Sbjct: 718 ISSLVASTELQFSMEAWFSGKKIGHRVGRTRKEAQNKAAEDSIKHLADIYLSSAKDEPGS 777
Query: 705 MDRDFDKLSLENENGFL 721
D N++G++
Sbjct: 778 TYGDVSGFPNVNDSGYM 794
>gi|224076842|ref|XP_002305017.1| predicted protein [Populus trichocarpa]
gi|222847981|gb|EEE85528.1| predicted protein [Populus trichocarpa]
Length = 967
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/850 (46%), Positives = 517/850 (60%), Gaps = 122/850 (14%)
Query: 6 YKNIVYHGDVCLGELDTIL----------------VSDENFQFPNNEIRIRHISPSSERC 49
YK++VY GD LGE++ V DE + EIRI H S +SERC
Sbjct: 2 YKSVVYKGDELLGEVEIYAQEQQQEEEENKNKKKRVIDEIVK----EIRISHFSQTSERC 57
Query: 50 IPLSILHTISSFSLRCKLESS--------APVEQP-HLINLHASCFYEFKTAVVVIGDEE 100
PL++LHTI+S + K+E S + E P HL LH+SC E KTAV+ +G EE
Sbjct: 58 PPLAVLHTITSIGVCFKMEESTSSSTTKISQQESPLHL--LHSSCIQENKTAVMHLGGEE 115
Query: 101 IHLVAMPSK--QKKFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFE 158
+HLVAMPS+ +++ PCFW +SV+ GLY+SCL MLNLRCL IVFDLDETLIVANTM+SFE
Sbjct: 116 LHLVAMPSRSNERQHPCFWGFSVAPGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFE 175
Query: 159 DRIEALRSWIAREPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVP 218
DRI+AL+ I+ E D R GM +E+KRY DD+ +LKQY END V++NGKV K Q E VP
Sbjct: 176 DRIDALQRKISTEVDPQRILGMLSEVKRYHDDKNILKQYVENDQVVENGKVIKTQSEVVP 235
Query: 219 PPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEV 278
S+NH+ +VRP+IR+ E+N++LTRINP+ RDTSVLVRLRPAWEDLRSYL A+GRKRFEV
Sbjct: 236 ALSDNHQPMVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEV 295
Query: 279 YVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGS--RKSLLNVFQRGLCHPKM 336
YVCTMAERDYALEMWRLLDPE +LI SK+LLDR+VCVKSG RKSL NVFQ G+CHPKM
Sbjct: 296 YVCTMAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGKCLRKSLFNVFQDGICHPKM 355
Query: 337 AMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEF 396
A+VIDDR KVW+++DQ RVHVVPAF PYYAPQAE NAVPVLCVARNVACNVRG FFKEF
Sbjct: 356 ALVIDDRLKVWDERDQSRVHVVPAFAPYYAPQAEVNNAVPVLCVARNVACNVRGGFFKEF 415
Query: 397 DENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRL 456
DE LL+ I EV YED+ N+P+ PDVSNYL+SED A NG+ + +G+ EVER+L
Sbjct: 416 DEGLLQKIPEVAYEDDTDNIPSPPDVSNYLVSEDDASAVNGNRDQLSFDGMADAEVERQL 475
Query: 457 N--QSDEKYVVDSG-----------LPSMKNSSDLK-----SETSLLPV------AVASN 492
+ +Y + S L S + L+ S+ S+ P VA +
Sbjct: 476 KVFRCSLQYTIASSSSSMPTSQPSMLASQQPMPALQPPKPPSQLSMTPFPNTQFPQVAPS 535
Query: 493 ATVPATVVPSQKPGLLGAPIRRDNSS---------------MKHGFDLRNQNSAQPPL-- 535
VVP + P L +P R + ++HG D R+ ++ P
Sbjct: 536 VKQLGQVVPPE-PSLQSSPAREEGEVPESELDPDTRRRLLILQHGHDSRDNAPSESPFPA 594
Query: 536 --------PKLHGQGGWI-VEEEVN--------RVLP-NNRPVSI--------------A 563
P++ G W+ VEEE++ R P ++ P++I
Sbjct: 595 RPSTQVSAPRVQSVGSWVPVEEEMSPRQLNRTPREFPLDSDPMNIEKHRTHHPSFFHKVE 654
Query: 564 TGLPS----HASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKT 619
+ +PS H +Q + +EA D K N ++ P G SS++R+ E +
Sbjct: 655 SNIPSDRMIHENQRQPKEATYRDDRMKLNHSTSNYPSFQGECPLSRSSSNRDLDLESERA 714
Query: 620 NLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQ 679
+ + VLQEI +C +KVEFR + + DLQFS+E F GEK+G G GKTR++AQ
Sbjct: 715 -FSSTETPVEVLQEIAMKCGTKVEFRPALIATSDLQFSIETWFVGEKVGEGTGKTRREAQ 773
Query: 680 QQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLR 739
+QAAE ++ LA K ++Y D + N+NGFL D + L+++ +
Sbjct: 774 RQAAEGSIKKLAGK-ISY-------HDISYYSYPSANDNGFLGDMNSFGNQPLLKDENIT 825
Query: 740 KESTPEASEV 749
+T E S +
Sbjct: 826 YSATSEPSRL 835
>gi|356548751|ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Glycine max]
Length = 960
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/773 (47%), Positives = 478/773 (61%), Gaps = 90/773 (11%)
Query: 32 FPNNEIRIRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKT 91
F EIRI H S SERC PL++LHT++S + K+ES +Q L LH+ C E KT
Sbjct: 35 FHVKEIRISHFSQPSERCPPLAVLHTVTSCGVCFKMESKT-QQQDGLFQLHSLCIRENKT 93
Query: 92 AVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVA 151
AV+ +G EEIHLVAM S+ PCFW + V+ GLY+SCL MLNLRCL IVFDLDETLIVA
Sbjct: 94 AVMPLGGEEIHLVAMHSRNDDRPCFWGFIVTLGLYDSCLVMLNLRCLGIVFDLDETLIVA 153
Query: 152 NTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFK 211
NTM+SFEDRI+AL+ I E D R SGM AE+KRY+DD+ +LKQY END V+DNG+V K
Sbjct: 154 NTMRSFEDRIDALQRKINSEVDPQRISGMQAEVKRYLDDKNILKQYAENDQVVDNGRVIK 213
Query: 212 VQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAK 271
VQ E VP S++H+ IVRP+IR+ ++N++LTRINP+ RDTSVLVRLRPAWEDLRSYL A+
Sbjct: 214 VQSEIVPALSDSHQPIVRPLIRLQDKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTAR 273
Query: 272 GRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGL 331
GRKRFEVYVCTMAERDYALEMWRLLDP+ +LI SK+LL R+VCVKSG +KSL NVFQ G
Sbjct: 274 GRKRFEVYVCTMAERDYALEMWRLLDPDSNLINSKELLGRIVCVKSGLKKSLFNVFQDGS 333
Query: 332 CHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGC 391
C PKMA+VIDDR KVW+++DQPRVHVVPAF PYYAPQAE +N +PVLCVARNVACNVRG
Sbjct: 334 CDPKMALVIDDRLKVWDERDQPRVHVVPAFAPYYAPQAEASNTIPVLCVARNVACNVRGG 393
Query: 392 FFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLE 451
FFK+FD+ LL+ I ++ YED+ ++P+ PDVSNYL+SED NG+ + + +G+ E
Sbjct: 394 FFKDFDDGLLQKIPQIAYEDDIKDVPSPPDVSNYLVSEDDGSISNGNRDPFLFDGMADAE 453
Query: 452 VERRLNQSDEKYVVDSGLPSMKNSSDLKSETSLLPVAVASNATVPATVVPS--------- 502
VER+L + S P + D + TSL V S + P T S
Sbjct: 454 VERKLK---DALAAASTFPVTTANLDPRL-TSLQYTMVPSGSVPPPTAQASMMPFPHVQF 509
Query: 503 ---------------QKPGLLGAPIRRDNSS---------------MKHGFDLRNQNSAQ 532
P L +P R + ++HG D R+ SA+
Sbjct: 510 PQPATLVKPMGQAAPSDPSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHASAE 569
Query: 533 PPLPKLH-----------GQGGWI-VEEEV-----NRVLP-----NNRPVSIATGLPSHA 570
PP P H +G W VEEE+ NRV+P ++ P+ I H
Sbjct: 570 PPFPVRHPVQASAPRVPSSRGVWFPVEEEIGSQPLNRVVPKEFPVDSGPLGIEKPRLHHP 629
Query: 571 SQAKGEEAIMA-----HDLHKQNLPPASQPPEIGVSQNHV-----------------SSN 608
S E+ ++ HD H Q LP + NH+ SS+
Sbjct: 630 SFFNKVESSISSDRILHDSH-QRLPKEMYHRDDRPRLNHMLSSYRSFSGDDIPFSRSSSS 688
Query: 609 SREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIG 668
R+ +E G + +L + + VL EI +C +KV+F S + S +L+FS+E F+G+KIG
Sbjct: 689 HRDLDSESGHS-VLHADTPVAVLHEIALKCGTKVDFMSSLVASTELKFSLEAWFSGKKIG 747
Query: 669 VGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFL 721
G G+TRK+AQ +AA++++ +LA+ Y++ G+ D N+NG++
Sbjct: 748 HGFGRTRKEAQNKAAKDSIEHLADIYLSSAKDEPGSTYGDVSGFPNVNDNGYM 800
>gi|218189405|gb|EEC71832.1| hypothetical protein OsI_04490 [Oryza sativa Indica Group]
Length = 745
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/451 (67%), Positives = 365/451 (80%), Gaps = 3/451 (0%)
Query: 10 VYHGDVCLGELDTILV---SDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
++HGDV LGE + + ++ + FP+NEIRI H+SP+SERC PL+IL TI+ FS+RCK
Sbjct: 28 MFHGDVFLGEAEVFPMKQGAEGSLPFPSNEIRISHLSPTSERCPPLAILQTIAPFSVRCK 87
Query: 67 LESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLY 126
L++ P L L+ +CF E+K+AVVV+GDEE+HLVAMPSK +K PCFWC SV SG+Y
Sbjct: 88 LQAKLMPPHPSLHRLYLTCFNEYKSAVVVVGDEELHLVAMPSKVEKVPCFWCCSVRSGIY 147
Query: 127 NSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKR 186
+ +GMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L + E D +R +GMSAE+KR
Sbjct: 148 AASVGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEMLSRRMDIEDDPVRIAGMSAEIKR 207
Query: 187 YMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINP 246
Y++DR LLK++ + D V DNG++ Q+EEV P S ER++RPVIR+PERN +LTRINP
Sbjct: 208 YIEDRELLKEFIDTDTVTDNGRIVGTQKEEVLPISGGQERVLRPVIRLPERNAILTRINP 267
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
E RDTSV V+LRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPE +LI S
Sbjct: 268 EVRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEANLISSH 327
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYA 366
L +RVVCVKSGS+K L NVF+ CHPKMAMVIDDR +VW++KDQPRVHVVPA+TPYYA
Sbjct: 328 NLAERVVCVKSGSKKCLQNVFKDKGCHPKMAMVIDDRLQVWDEKDQPRVHVVPAYTPYYA 387
Query: 367 PQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYL 426
PQAE ANAVPVLCVARNVACNVRG FF+EFDENLLR + E+ YE+E ++LP APDV +YL
Sbjct: 388 PQAEMANAVPVLCVARNVACNVRGGFFREFDENLLRKVFELMYENEFLDLPYAPDVGDYL 447
Query: 427 MSEDANFAPNGSTNAPMSEGLNGLEVERRLN 457
+ ED NFAPN AP+ EG++G EV +RLN
Sbjct: 448 VCEDTNFAPNNKDVAPIPEGMSGAEVGKRLN 478
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 515 DNSSMKHGFDLRNQNSAQPPLPKLHGQGGWIVEEEVNRVLPNNRPVSIATGLPSHASQAK 574
D + ++ F+L +N LP G ++V E+ N PNN+ V+ +P S A+
Sbjct: 418 DENLLRKVFELMYENEFLD-LPYAPDVGDYLVCEDTN-FAPNNKDVA---PIPEGMSGAE 472
Query: 575 GEEAI--MAHDLHKQNLPPASQ-PPEIGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVL 631
+ + +A+ ++ +P +++ + GV+ + + + GG PS L + VL
Sbjct: 473 VGKRLNGLAYPRDQKQIPSSTRLSDDDGVALRGIPGGT-NIQSNGGSLATTPS-LFVTVL 530
Query: 632 QEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691
QEIG+ C S+VEFRS VS+ K++QFSVEVLF+ EKIG+G+GKTR +AQ AAE AL L
Sbjct: 531 QEIGRLCESRVEFRSTVSSGKNMQFSVEVLFSNEKIGIGIGKTRDEAQVLAAEKALQNLE 590
Query: 692 EKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISE 728
Y++++ P +G +++D +K + NGFL D +SE
Sbjct: 591 SNYLSFMAPVAGVLNKDVNK-PPGSGNGFLEDITLSE 626
>gi|115441141|ref|NP_001044850.1| Os01g0857000 [Oryza sativa Japonica Group]
gi|56784824|dbj|BAD82045.1| C-terminal domain phosphatase-like protein [Oryza sativa Japonica
Group]
gi|56785358|dbj|BAD82316.1| C-terminal domain phosphatase-like protein [Oryza sativa Japonica
Group]
gi|113534381|dbj|BAF06764.1| Os01g0857000 [Oryza sativa Japonica Group]
gi|222619564|gb|EEE55696.1| hypothetical protein OsJ_04124 [Oryza sativa Japonica Group]
Length = 756
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/451 (67%), Positives = 365/451 (80%), Gaps = 3/451 (0%)
Query: 10 VYHGDVCLGELDTILV---SDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
++HGDV LGE + + ++ + FP+NEIRI H+SP+SERC PL+IL TI+ FS+RCK
Sbjct: 28 MFHGDVFLGEAEVFPMKQGAEGSLPFPSNEIRISHLSPTSERCPPLAILQTIAPFSVRCK 87
Query: 67 LESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLY 126
L++ P L L+ +CF E+K+AVVV+GDEE+HLVAMPSK +K PCFWC SV SG+Y
Sbjct: 88 LQAKLMPPHPSLHRLYLTCFNEYKSAVVVVGDEELHLVAMPSKVEKVPCFWCCSVRSGIY 147
Query: 127 NSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKR 186
+ +GMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L + E D +R +GMSAE+KR
Sbjct: 148 AASVGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEMLSRRMDIEDDPVRIAGMSAEIKR 207
Query: 187 YMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINP 246
Y++DR LLK++ + D V DNG++ Q+EEV P S ER++RPVIR+PERN +LTRINP
Sbjct: 208 YIEDRELLKEFIDTDTVTDNGRIVGTQKEEVLPISGGQERVLRPVIRLPERNAILTRINP 267
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
E RDTSV V+LRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPE +LI S
Sbjct: 268 EVRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEANLISSH 327
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYA 366
L +RVVCVKSGS+K L NVF+ CHPKMAMVIDDR +VW++KDQPRVHVVPA+TPYYA
Sbjct: 328 NLAERVVCVKSGSKKCLQNVFKDKGCHPKMAMVIDDRLQVWDEKDQPRVHVVPAYTPYYA 387
Query: 367 PQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYL 426
PQAE ANAVPVLCVARNVACNVRG FF+EFDENLLR + E+ YE+E ++LP APDV +YL
Sbjct: 388 PQAEMANAVPVLCVARNVACNVRGGFFREFDENLLRKVFELMYENELLDLPYAPDVGDYL 447
Query: 427 MSEDANFAPNGSTNAPMSEGLNGLEVERRLN 457
+ ED NFAPN AP+ EG++G EV +RLN
Sbjct: 448 VCEDTNFAPNNKDVAPIPEGMSGAEVGKRLN 478
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 515 DNSSMKHGFDLRNQNSAQPPLPKLHGQGGWIVEEEVNRVLPNNRPVSIATGLPSHASQAK 574
D + ++ F+L +N LP G ++V E+ N PNN+ V+ +P S A+
Sbjct: 418 DENLLRKVFELMYENELLD-LPYAPDVGDYLVCEDTN-FAPNNKDVA---PIPEGMSGAE 472
Query: 575 GEEAI--MAHDLHKQNLPPASQ-PPEIGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVL 631
+ + +A+ ++ +P +++ + GV+ + + + GG PS L + VL
Sbjct: 473 VGKRLNGLAYPRDQKQIPSSTRLSDDDGVALRGIPGGT-NIQSNGGSLATTPS-LFVTVL 530
Query: 632 QEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691
QEIG+ C S+VEFRS VS+ K++QFSVEVLF+ EKIG+G+GKTR +AQ AAE AL L
Sbjct: 531 QEIGRLCESRVEFRSTVSSGKNMQFSVEVLFSNEKIGIGIGKTRDEAQVLAAEKALQNLE 590
Query: 692 EKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISE 728
Y++++ P +G +++D +K + NGFL D +SE
Sbjct: 591 SNYLSFMAPVAGVLNKDVNK-PPGSGNGFLEDITLSE 626
>gi|115447513|ref|NP_001047536.1| Os02g0639000 [Oryza sativa Japonica Group]
gi|49388226|dbj|BAD25346.1| double-stranded RNA-binding domain (DsRBD)-containing protein-like
[Oryza sativa Japonica Group]
gi|49388720|dbj|BAD25901.1| double-stranded RNA-binding domain (DsRBD)-containing protein-like
[Oryza sativa Japonica Group]
gi|113537067|dbj|BAF09450.1| Os02g0639000 [Oryza sativa Japonica Group]
gi|215695163|dbj|BAG90354.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623318|gb|EEE57450.1| hypothetical protein OsJ_07667 [Oryza sativa Japonica Group]
Length = 940
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 388/821 (47%), Positives = 494/821 (60%), Gaps = 94/821 (11%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTISSFSLR 64
+++VY G+ +GE++ D + EIR+ +SP SERC PL+++HT++ +
Sbjct: 3 RSMVYFGNTSIGEVEVWPSGDASLAAAAWAREIRVDRLSPPSERCQPLAVMHTVAVGARC 62
Query: 65 CKLESSAPV---EQPH-LINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFWC 118
+ES P E P L+ +HA+C E KTAVV +G+EE+HLVAM S++ CFW
Sbjct: 63 LVMESRLPKAADEPPQPLVAMHAACLKENKTAVVPLGEEELHLVAMTSRRNLTNHACFWG 122
Query: 119 YSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRAS 178
Y V GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI+AL+ ++ E D R +
Sbjct: 123 YKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRKLSNETDPQRIN 182
Query: 179 GMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERN 238
GM AE+KRY DD+++LKQY E D V D+GK++KVQ E VPP S+NH+ + RPVIR+ E+N
Sbjct: 183 GMIAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPELVPPLSDNHQPMTRPVIRLQEKN 242
Query: 239 LVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298
++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLDP
Sbjct: 243 IILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDP 302
Query: 299 EGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVV 358
+ LI S QL DR+VCVKSG RKSLLNVF G CHP MA+VIDDR KVW++KDQ RVHVV
Sbjct: 303 DSRLINSVQLNDRMVCVKSGLRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRVHVV 362
Query: 359 PAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPA 418
PAFTPYYAPQAE ++PVLCVARNVACNVRG FFK+FDE LL IS VFYEDE +P+
Sbjct: 363 PAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVFYEDEINEIPS 422
Query: 419 APDVSNYLMSEDANFAP-NGSTNAPMSEGLNGLEVERRLNQSD---EKYVVDSG---LPS 471
APDV NYL+SED N A NG+ + +G+ EVERR+ ++ + + + +P
Sbjct: 423 APDVGNYLISEDENVAAVNGNRDPLAFDGMADAEVERRMKEASGNAQAFTTTAANFVMPV 482
Query: 472 MKNSSDLKSET-----SLLPVAVASNATVPATVVP----SQKPGLLGAPIRRDNSS---- 518
+ + + S SL V +++N P P S L G+P R +
Sbjct: 483 LPGQNFVSSSVAPVAPSLGMVPLSNNQGPPPFTQPVAQLSLSDPLQGSPAREEGEVPESE 542
Query: 519 -----------MKHGFDLRN-------QNSAQPPLPKLHGQGGWI-VEEEVNRVLPNNRP 559
++HG D R+ Q P+P + G W VE+ +N PNN
Sbjct: 543 LDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPHGNWFPVEDGMN---PNNLN 599
Query: 560 VSIATGLP-------------SHASQAKGEEAIMAHDLHKQNLPPASQPP---EIGVSQN 603
A G P H GE I + QN SQ P + V QN
Sbjct: 600 RGSA-GFPLESETMHYDKKQLPHPFFHGGENPISSDRFSYQNQRYPSQLPHSEDHRVLQN 658
Query: 604 HVSSNSREFLTEGGKTNLLPSYL-----------------SIGVLQEIGKRCSSKVEFRS 646
H S R F E T + S S G+L+EI +C SKVE+RS
Sbjct: 659 HAPSRYRSFPGEELATRHVSSSQRNNQIVPGQHFARHAGSSAGILEEIAMKCGSKVEYRS 718
Query: 647 VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMD 706
+ + DLQFS+EV GEK+G G+G+TRK+AQ QAAE +L LA KY++
Sbjct: 719 ALCDTADLQFSIEVWIVGEKVGEGIGRTRKEAQCQAAEISLRNLANKYLS---------- 768
Query: 707 RDFDKLSLENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
D +K++ ENGF +T I R+D L ST E +
Sbjct: 769 SDPNKMTDMKENGFGSNTNIFGYPGNSRDDVLPIASTSEET 809
>gi|242059289|ref|XP_002458790.1| hypothetical protein SORBIDRAFT_03g040355 [Sorghum bicolor]
gi|241930765|gb|EES03910.1| hypothetical protein SORBIDRAFT_03g040355 [Sorghum bicolor]
Length = 718
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 301/457 (65%), Positives = 362/457 (79%), Gaps = 3/457 (0%)
Query: 10 VYHGDVCLGELDTILV---SDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
++HG+V LGE++ + + FP+NEIR+ H+SP+SERC PL+IL TI+ FS+RCK
Sbjct: 7 MFHGEVYLGEMEVFPMKQGGEGGLPFPSNEIRVSHLSPASERCPPLAILQTIAPFSVRCK 66
Query: 67 LESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLY 126
L + P L L+ +CF EFK+AVVV+GDEE+HLVAMP+K K PCFWC S SGLY
Sbjct: 67 LHTKLTPPNPSLQRLYLTCFNEFKSAVVVVGDEELHLVAMPTKSGKMPCFWCCSARSGLY 126
Query: 127 NSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKR 186
+ +GMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L + E D IR +GMSAE+KR
Sbjct: 127 AASVGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEMLSRRMDVEDDPIRITGMSAEIKR 186
Query: 187 YMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINP 246
Y++D+ LLK++ + D V DNGK+ Q+EEV P S ER++RPVIR+P+RN +LTRINP
Sbjct: 187 YIEDKELLKEFIDTDTVTDNGKIVGTQKEEVQPMSGGQERVLRPVIRLPDRNAILTRINP 246
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
ENRDTSV V+LRPAWE+LRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPEG+LI +
Sbjct: 247 ENRDTSVFVKLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLISPQ 306
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYA 366
QL +RV CVKSGSRKSL NVF+ CHPKMAMVIDDR VW+DKDQ RVHVVPA+TPYYA
Sbjct: 307 QLSERVNCVKSGSRKSLQNVFRDRGCHPKMAMVIDDRLNVWDDKDQHRVHVVPAYTPYYA 366
Query: 367 PQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYL 426
PQAE ANAVPVLCVARNVACNVRG FF+EFDENLLR + E++YE+ ++LP APDV +YL
Sbjct: 367 PQAEMANAVPVLCVARNVACNVRGGFFREFDENLLRKVFELYYENGLLDLPYAPDVGDYL 426
Query: 427 MSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKY 463
+ ED NF P AP+ EG+ G EVE+RLN ++
Sbjct: 427 VCEDTNFVPGNKDQAPIPEGMRGNEVEKRLNGQSYRW 463
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 115/222 (51%), Gaps = 4/222 (1%)
Query: 515 DNSSMKHGFDLRNQNSAQPPLPKLHGQGGWIVEEEVNRVLPNNRPVSIATGLPSHASQAK 574
D + ++ F+L +N LP G ++V E+ N V N I G+ + + +
Sbjct: 397 DENLLRKVFELYYENGLLD-LPYAPDVGDYLVCEDTNFVPGNKDQAPIPEGMRGNEVEKR 455
Query: 575 -GEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQE 633
++ Q + +++ P+ + R GG + PS + + VLQE
Sbjct: 456 LNGQSYRWEQREGQQMSFSTRSPDDEGMPIRGTGGVRTIQPNGGSLAITPS-VYVTVLQE 514
Query: 634 IGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693
IG+ C SKVEFRS VS K + FSVEVLF+ EKIG+G+GKTR +AQ QAAE AL L
Sbjct: 515 IGQLCDSKVEFRSTVSNGKSMLFSVEVLFSNEKIGIGIGKTRDEAQVQAAEKALQNLESS 574
Query: 694 YVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLRE 735
Y++ ++ +G ++ K + NGFL D S+++ +RE
Sbjct: 575 YLSSVSLVAGVPKKESRK-PPGSGNGFLEDAPCSDNDISMRE 615
>gi|218191244|gb|EEC73671.1| hypothetical protein OsI_08218 [Oryza sativa Indica Group]
Length = 937
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 387/820 (47%), Positives = 493/820 (60%), Gaps = 95/820 (11%)
Query: 9 IVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
+VY G+ +GE++ D + EIR+ +SP SERC PL+++HT++ +
Sbjct: 1 MVYFGNTSIGEVEVWPSGDASLAAAAWAREIRVDRLSPPSERCQPLAVMHTVAVGARCLV 60
Query: 67 LESSAPV---EQPH-LINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFWCYS 120
+ES P E P L+ +HA+C E KTAVV +G+EE+HLVAM S++ CFW Y
Sbjct: 61 MESRLPKAADEPPQPLVAMHAACLKENKTAVVPLGEEELHLVAMTSRRNLTNHACFWGYK 120
Query: 121 VSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGM 180
V GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI+AL+ ++ E D R SGM
Sbjct: 121 VPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRKLSNETDPQRISGM 180
Query: 181 SAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLV 240
AE+KRY DD+++L+QY E D V D+GK++KVQ E VPP S+NH+ + RPVIR+ E+N++
Sbjct: 181 IAEIKRYQDDKSILRQYIEGDQVYDDGKMYKVQPELVPPLSDNHQPMTRPVIRLQEKNII 240
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLDP+
Sbjct: 241 LTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPDS 300
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA 360
LI S QL DR+VCVKSG RKSLLNVF G CHP MA+VIDDR KVW++KDQ RVHVVPA
Sbjct: 301 RLINSVQLNDRMVCVKSGLRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRVHVVPA 360
Query: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAP 420
FTPYYAPQAE ++PVLCVARNVACNVRG FFK+FDE LL IS VFYEDE +P+AP
Sbjct: 361 FTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVFYEDEINEIPSAP 420
Query: 421 DVSNYLMSEDANFAP-NGSTNAPMSEGLNGLEVERRLNQSD---EKYVVDSG---LPSMK 473
DV NYL+SED N A NG+ + +G+ EVERR+ ++ + + + +P +
Sbjct: 421 DVGNYLISEDENVAAVNGNRDPLAFDGMADAEVERRMKEASGNAQAFTTTAANFVMPVLP 480
Query: 474 NSSDLKSET-----SLLPVAVASNA------TVPATVVPSQKPGLLGAPIRRDNSS---- 518
+ + S SL V +++N T P + P L G+P R +
Sbjct: 481 GQNFVSSSVAPVAPSLGMVPLSNNQGPPPPFTQPVAQLSLSDP-LQGSPAREEGEVPESE 539
Query: 519 -----------MKHGFDLRNQNSAQPPLPKLHG-------QGGWI-VEEEVNRVLPNNR- 558
++HG D R+ P +P + G W VE+ +N PNN
Sbjct: 540 LDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPHGNWFPVEDGMN---PNNLN 596
Query: 559 ------PVSIAT-----GLPSHASQAKGEEAIMAHDLHKQNLPPASQPP---EIGVSQNH 604
P+ T P H GE I + QN SQ P + V QNH
Sbjct: 597 RGSAGFPLESETMHYDKKQPPHPFFHGGENPISSDRFSYQNQRYPSQLPHSEDHRVLQNH 656
Query: 605 VSSNSREFLTEGGKTNLLPSYL-----------------SIGVLQEIGKRCSSKVEFRSV 647
S R F E T + S S G+L+EI +C SKVE+RS
Sbjct: 657 APSRYRSFPGEELATRHVSSSQRNNQIVPGQHFARHAGSSAGILEEIAMKCGSKVEYRSA 716
Query: 648 VSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDR 707
+ + DLQFS+EV GEK+G G+G+TRK+AQ QAAE +L LA KY++
Sbjct: 717 LCDTADLQFSIEVWIVGEKVGEGIGRTRKEAQCQAAEISLRNLANKYLS----------S 766
Query: 708 DFDKLSLENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
D +K++ ENGF +T I R+D L ST E +
Sbjct: 767 DPNKMTGMKENGFGSNTNIFGYPGNSRDDVLPIASTSEET 806
>gi|56784825|dbj|BAD82046.1| C-terminal domain phosphatase-like protein [Oryza sativa Japonica
Group]
gi|56785359|dbj|BAD82317.1| C-terminal domain phosphatase-like protein [Oryza sativa Japonica
Group]
Length = 524
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 303/451 (67%), Positives = 365/451 (80%), Gaps = 3/451 (0%)
Query: 10 VYHGDVCLGELDTILV---SDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
++HGDV LGE + + ++ + FP+NEIRI H+SP+SERC PL+IL TI+ FS+RCK
Sbjct: 28 MFHGDVFLGEAEVFPMKQGAEGSLPFPSNEIRISHLSPTSERCPPLAILQTIAPFSVRCK 87
Query: 67 LESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLY 126
L++ P L L+ +CF E+K+AVVV+GDEE+HLVAMPSK +K PCFWC SV SG+Y
Sbjct: 88 LQAKLMPPHPSLHRLYLTCFNEYKSAVVVVGDEELHLVAMPSKVEKVPCFWCCSVRSGIY 147
Query: 127 NSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKR 186
+ +GMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L + E D +R +GMSAE+KR
Sbjct: 148 AASVGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEMLSRRMDIEDDPVRIAGMSAEIKR 207
Query: 187 YMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINP 246
Y++DR LLK++ + D V DNG++ Q+EEV P S ER++RPVIR+PERN +LTRINP
Sbjct: 208 YIEDRELLKEFIDTDTVTDNGRIVGTQKEEVLPISGGQERVLRPVIRLPERNAILTRINP 267
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
E RDTSV V+LRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPE +LI S
Sbjct: 268 EVRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEANLISSH 327
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYA 366
L +RVVCVKSGS+K L NVF+ CHPKMAMVIDDR +VW++KDQPRVHVVPA+TPYYA
Sbjct: 328 NLAERVVCVKSGSKKCLQNVFKDKGCHPKMAMVIDDRLQVWDEKDQPRVHVVPAYTPYYA 387
Query: 367 PQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYL 426
PQAE ANAVPVLCVARNVACNVRG FF+EFDENLLR + E+ YE+E ++LP APDV +YL
Sbjct: 388 PQAEMANAVPVLCVARNVACNVRGGFFREFDENLLRKVFELMYENELLDLPYAPDVGDYL 447
Query: 427 MSEDANFAPNGSTNAPMSEGLNGLEVERRLN 457
+ ED NFAPN AP+ EG++G EV +RLN
Sbjct: 448 VCEDTNFAPNNKDVAPIPEGMSGAEVGKRLN 478
>gi|326533226|dbj|BAJ93585.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 932
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 378/816 (46%), Positives = 497/816 (60%), Gaps = 93/816 (11%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTISSFSLR 64
K++VY+G+ +GE++ D N EIR+ +SP SERC+PL+++HT++ R
Sbjct: 3 KSMVYYGNTSIGEVEVWPKGDTNLGAAAWAREIRVDRLSPPSERCLPLAVMHTVA-VGAR 61
Query: 65 CKLESS----APVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQ--KKFPCFWC 118
C + S A P L+ +HA+C + KTAVV +G+EE+HLVAM S++ CFW
Sbjct: 62 CLVMESRPPTADEPPPPLVAMHAACLRDNKTAVVPLGEEELHLVAMTSRRHLTNHACFWG 121
Query: 119 YSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRAS 178
Y V GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI++L+ ++ E D R +
Sbjct: 122 YKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDSLQRKLSNETDPQRMN 181
Query: 179 GMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERN 238
GM AE+KRY DD+++LKQY E D V D+GK++KVQ E VPP S+NH+ + RPVIR+ E+N
Sbjct: 182 GMLAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPEIVPPLSDNHQSLTRPVIRLQEKN 241
Query: 239 LVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298
++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLDP
Sbjct: 242 IILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDP 301
Query: 299 EGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVV 358
+ LI S QL DR+VCVKSG +KSLLNVF G CHP MA+VIDDR KVW++KDQ RVHVV
Sbjct: 302 DSKLINSVQLSDRMVCVKSGLKKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRVHVV 361
Query: 359 PAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPA 418
PAFTPYYAPQAE ++PVLCVARNVACNVRG FFK+FDE LL I+ V YEDE ++ +
Sbjct: 362 PAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRITSVLYEDEIQDISS 421
Query: 419 APDVSNYLMSEDANFAP-NGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGL-PSMKN-S 475
APDV NYL+SED N A NG+ ++ +G+ EVERR+ ++ S L P+M N
Sbjct: 422 APDVGNYLISEDENVAVVNGNRDSLAFDGMADAEVERRMKEASGS---GSALNPTMANLV 478
Query: 476 SDLKSETSLLPVAVA-----------SNATVPATVV--PSQKPGLL----GAPIRRDNSS 518
+ S +P +VA SN VP P +PGLL +P R +
Sbjct: 479 MPVAPSQSFVPSSVAPFAPPLGMMPLSNNQVPPPPFSQPVVQPGLLDPLQASPGREEGEV 538
Query: 519 ---------------MKHGFDLRNQNSAQPPLPKLHG-------QGGWI-VEEEVNRVLP 555
++HG D R+ P +P + G W VE+ +N
Sbjct: 539 PESELDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVSVPPVQSHGNWFPVEDGMN---- 594
Query: 556 NNRPVSIATGLPSHASQAK--------------GEEAIMAHD---LHKQNLPP-ASQPPE 597
+N + G PS + G+ +++ D Q P + +
Sbjct: 595 SNNSNRGSAGFPSESDTMHFDEKQPPHPSYFHGGDNNLVSSDRFSYQSQRFPSQVAHTED 654
Query: 598 IGVSQNHVSSNSREF------LTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTS 651
+ QN+V R F L E G++ S+G+L+EI + SKVE+RS + +
Sbjct: 655 HRMLQNNVPPRYRSFPGQRNNLIESGQSYARNVGTSVGILEEIALKSGSKVEYRSTLCDT 714
Query: 652 KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDK 711
+LQFS+EV GEK+G G+G TRK+AQ+QAAE +L LA KY+ D +K
Sbjct: 715 AELQFSIEVWIVGEKVGEGIGSTRKEAQRQAAEISLRNLANKYLL----------SDPNK 764
Query: 712 LSLENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
++ NE+GF + +E R + L+ ST E S
Sbjct: 765 MTDVNEDGFDSNPNFFGYSENTRNNMLQVASTSEES 800
>gi|38346621|emb|CAD41201.2| OSJNBa0074L08.12 [Oryza sativa Japonica Group]
Length = 945
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 379/835 (45%), Positives = 495/835 (59%), Gaps = 114/835 (13%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTI 58
M + K++VY+G +G ++ + EIR+ H+SP SERC PL++LH +
Sbjct: 1 MVMMMIKSVVYYGSTSIGHVEVWPKGGTDLAVAAWAREIRVDHLSPPSERCPPLAVLHAV 60
Query: 59 SSFSLRCKLESSAPVEQ-----PHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK-- 111
++ RC + S P P L+ +HA+C + KTAV +G EEIHLVAM SK+
Sbjct: 61 AAGG-RCLVMESRPTATADEPPPPLVAMHAACLRDGKTAVFPLGAEEIHLVAMTSKRNLP 119
Query: 112 KFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171
CFW Y V SGLYNSCL MLNLRCL IVFDLDETL+VANT +SFEDRI+AL+ ++ E
Sbjct: 120 NLACFWGYKVPSGLYNSCLSMLNLRCLGIVFDLDETLLVANTTRSFEDRIDALQRKLSNE 179
Query: 172 PDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPV 231
D SGMSAE+KRY +D+++LKQY END V+D GKV+KVQ E +PP +NH+ + RP+
Sbjct: 180 IDPQHISGMSAEIKRYQEDKSILKQYIENDQVIDGGKVYKVQTEVIPPLPDNHQPMTRPI 239
Query: 232 IRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALE 291
IR+ E+N++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALE
Sbjct: 240 IRLQEKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALE 299
Query: 292 MWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKD 351
MWRLLDP+ LI S QL DR+VCVKSGSRKSLLNVF G CHP+MA+VIDDR KVW++KD
Sbjct: 300 MWRLLDPDSRLINSVQLTDRLVCVKSGSRKSLLNVFHDGSCHPEMALVIDDRLKVWDEKD 359
Query: 352 QPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYED 411
Q RVHVVPAF+PYY+PQAE +VPVLC ARNVACNVRG FFKEFDE LL ISE+ YED
Sbjct: 360 QCRVHVVPAFSPYYSPQAEANFSVPVLCFARNVACNVRGGFFKEFDEVLLPRISEIHYED 419
Query: 412 EAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMS-EGLNGLEVERRLNQSDEKYVVDSGLP 470
E + P+APDV NYL++ED N A P++ +G+ EVERRL + + +P
Sbjct: 420 EINDFPSAPDVGNYLITEDENAAILNVNKDPLAFDGMADAEVERRLKEVSCSVQAVNPIP 479
Query: 471 S----MKNSSDLKSETSLLPVA---------------------VASNATV-PATVVPSQK 504
+ M + + + TS +P A VA +A V P+ P+++
Sbjct: 480 TNADVMPVAPNQQLITSSVPEAPSLGMIPLNNDQGPQPPSSWPVAQSAPVDPSQSSPARE 539
Query: 505 PG-----LLGAPIRRDNSSMKHGFDLRNQNSAQPPLPK----------LHGQGGWI-VEE 548
G L RR ++HG D R+ PP P + G W VE+
Sbjct: 540 EGEVPESELDPDTRRRLLILQHGQDTRD---PAPPCPAGSPVQTSVLPVQSHGNWSHVED 596
Query: 549 EVN-RVLPNNRPVSIATGL-------------PSHASQAKGEEAIMAHDLHKQNLPPASQ 594
E+N R L NR +TG P + E+ ++ D + + +
Sbjct: 597 EMNPRSL--NR---TSTGFHLESDDINYDKKQPHNPPYFPDEDNLITSDRYNRRI--HRY 649
Query: 595 PPEIGVSQNH----------------------VSSNSREFLTEGGKTNLLPSYLSIGVLQ 632
P ++ S++H SN R E G + + S GVL+
Sbjct: 650 PSQLPHSEDHHMLNRSSIAYRSFPGEDMGNRFGPSNHRSSKIEPGHQFVQNAETSAGVLE 709
Query: 633 EIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692
EI C KVE++S + ++ +LQFS+EV GEK+G G+GKTRK A++QA +L LAE
Sbjct: 710 EIAVECGFKVEYQSTLCSTAELQFSIEVRILGEKVGEGIGKTRKAAKRQAVNMSLRNLAE 769
Query: 693 KYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
K+ + D DK+ + ENGF S SN G R +++P AS
Sbjct: 770 KF----------LTSDPDKMMILKENGF-----SSNSNSFRYSGGSRDDTSPVAS 809
>gi|116312020|emb|CAJ86376.1| OSIGBa0155K17.3 [Oryza sativa Indica Group]
Length = 973
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 379/835 (45%), Positives = 495/835 (59%), Gaps = 114/835 (13%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTI 58
M + K++VY+G +G ++ + EIR+ H+SP SERC PL++LH +
Sbjct: 1 MVMMMIKSVVYYGSTSIGHVEVWPKGGTDLAVAAWAREIRVDHLSPPSERCPPLAVLHAV 60
Query: 59 SSFSLRCKLESSAPVEQ-----PHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK-- 111
++ RC + S P P L+ +HA+C + KTAV +G EEIHLVAM SK+
Sbjct: 61 AAGG-RCLVMESRPTATADEPPPPLVAMHAACLRDGKTAVFPLGAEEIHLVAMTSKRNLP 119
Query: 112 KFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171
CFW Y V SGLYNSCL MLNLRCL IVFDLDETL+VANT +SFEDRI+AL+ ++ E
Sbjct: 120 NLACFWGYKVPSGLYNSCLSMLNLRCLGIVFDLDETLLVANTTRSFEDRIDALQRKLSNE 179
Query: 172 PDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPV 231
D SGMSAE+KRY +D+++LKQY END V+D GKV+KVQ E +PP +NH+ + RP+
Sbjct: 180 IDPQHISGMSAEIKRYQEDKSILKQYIENDQVIDGGKVYKVQTEVIPPLPDNHQPMTRPI 239
Query: 232 IRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALE 291
IR+ E+N++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALE
Sbjct: 240 IRLQEKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALE 299
Query: 292 MWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKD 351
MWRLLDP+ LI S QL DR+VCVKSGSRKSLLNVF G CHP+MA+VIDDR KVW++KD
Sbjct: 300 MWRLLDPDSRLINSVQLTDRLVCVKSGSRKSLLNVFHDGSCHPEMALVIDDRLKVWDEKD 359
Query: 352 QPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYED 411
Q RVHVVPAF+PYY+PQAE +VPVLC ARNVACNVRG FFKEFDE LL ISE+ YED
Sbjct: 360 QCRVHVVPAFSPYYSPQAEANFSVPVLCFARNVACNVRGGFFKEFDEVLLPRISEIHYED 419
Query: 412 EAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMS-EGLNGLEVERRLNQSDEKYVVDSGLP 470
E + P+APDV NYL++ED N A P++ +G+ EVERRL + + +P
Sbjct: 420 EINDFPSAPDVGNYLITEDENAAILNVNKDPLAFDGMADAEVERRLKEVSCSVQAVNPIP 479
Query: 471 S----MKNSSDLKSETSLLPVA---------------------VASNATV-PATVVPSQK 504
+ M + + + TS +P A VA +A V P+ P+++
Sbjct: 480 TNADVMPVAPNQQLITSSVPEAPSLGMIPLNNDQGPQPPSSWPVAQSAPVDPSQSSPARE 539
Query: 505 PG-----LLGAPIRRDNSSMKHGFDLRNQNSAQPPLPK----------LHGQGGWI-VEE 548
G L RR ++HG D R+ PP P + G W VE+
Sbjct: 540 EGEVPESELDPDTRRRLLILQHGQDTRD---PAPPCPAGSPVQTSVLPVQSHGNWSHVED 596
Query: 549 EVN-RVLPNNRPVSIATGL-------------PSHASQAKGEEAIMAHDLHKQNLPPASQ 594
E+N R L NR +TG P + E+ ++ D + + +
Sbjct: 597 EMNPRSL--NR---TSTGFHLESDDINYDKKQPHNPPYFPDEDNLITSDRYNRRI--HRY 649
Query: 595 PPEIGVSQNH----------------------VSSNSREFLTEGGKTNLLPSYLSIGVLQ 632
P ++ S++H SN R E G + + S GVL+
Sbjct: 650 PSQLPHSEDHHMLNRSSIAYRSFPGEDMGNRFGPSNHRSSKIEPGHQFVQNAETSAGVLE 709
Query: 633 EIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692
EI C KVE++S + ++ +LQFS+EV GEK+G G+GKTRK A++QA +L LAE
Sbjct: 710 EIAVECGFKVEYQSTLCSTAELQFSIEVRILGEKVGEGIGKTRKAAKRQAVNMSLRNLAE 769
Query: 693 KYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
K+ + D DK+ + ENGF S SN G R +++P AS
Sbjct: 770 KF----------LTSDPDKMMILKENGF-----SSNSNSFRYSGGSRDDTSPVAS 809
>gi|414879622|tpg|DAA56753.1| TPA: hypothetical protein ZEAMMB73_254643 [Zea mays]
Length = 749
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 302/473 (63%), Positives = 364/473 (76%), Gaps = 5/473 (1%)
Query: 10 VYHGDVCLGELDTILV---SDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
++HG+ LGE++ + + FP NEIR+ H SP+SERC PL+IL TI+ FS+RCK
Sbjct: 36 MFHGESFLGEMEVFPMKRDGEGGLPFPTNEIRVSHFSPASERCPPLAILQTIAPFSVRCK 95
Query: 67 LESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLY 126
L++ P L L+ +CF EFK+AVVV+GDEE+HLVAMP+K K PCFWC S SGLY
Sbjct: 96 LQTKLTPPNPGLQRLYLTCFNEFKSAVVVVGDEELHLVAMPTKSGKVPCFWCCSARSGLY 155
Query: 127 NSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKR 186
+ +GMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L + E D IR +GMSAE+KR
Sbjct: 156 AASVGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEMLSRRMDVEDDPIRIAGMSAEIKR 215
Query: 187 YMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINP 246
Y++D+ LLK++ + D V DNGK+ Q+EEV P S ER+ RPVIR+P+RN +LTRINP
Sbjct: 216 YIEDKELLKEFIDMDTVTDNGKIVGTQKEEVQPMSGGQERVFRPVIRLPDRNAILTRINP 275
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
ENRDTSV V+LRPAWE+LRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPEG+LI +
Sbjct: 276 ENRDTSVFVKLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLISPQ 335
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYA 366
QL +RV CVKSGS+KSL NVF+ CHPKMAMVIDDR VW+DKDQ RVHVVPA+ PYYA
Sbjct: 336 QLSERVNCVKSGSKKSLQNVFRDRRCHPKMAMVIDDRLNVWDDKDQHRVHVVPAYIPYYA 395
Query: 367 PQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYL 426
PQAE ANAVPVLCVARNVACNVRG FF+EFDENLLR + E++YE+ ++LP APDV +YL
Sbjct: 396 PQAEMANAVPVLCVARNVACNVRGGFFREFDENLLRKVFELYYENGLLDLPYAPDVGDYL 455
Query: 427 MSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSG--LPSMKNSSD 477
+ ED +F P AP+ EG+ G EVE+RLN ++ G +PS S D
Sbjct: 456 VCEDTSFVPGNKDQAPIPEGMRGTEVEKRLNGQSYRWEQREGQQMPSSIRSPD 508
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 141/293 (48%), Gaps = 25/293 (8%)
Query: 452 VERRLNQSDEK-----YVVDSGLPSMKNSSDLKSETSLLPVA--VASNATVPATVVPSQK 504
++ RLN D+K +VV + +P +++ + +L VA VA N
Sbjct: 369 IDDRLNVWDDKDQHRVHVVPAYIPYYAPQAEMANAVPVLCVARNVACN------------ 416
Query: 505 PGLLGAPIRR-DNSSMKHGFDLRNQNSAQPPLPKLHGQGGWIVEEEVNRVLPNNRPVSIA 563
+ G R D + ++ F+L +N LP G ++V E+ + V N I
Sbjct: 417 --VRGGFFREFDENLLRKVFELYYENGLLD-LPYAPDVGDYLVCEDTSFVPGNKDQAPIP 473
Query: 564 TGLPSHASQAK-GEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLL 622
G+ + + ++ Q +P + + P+ + R GG +
Sbjct: 474 EGMRGTEVEKRLNGQSYRWEQREGQQMPSSIRSPDDEGMPIRGTGGVRNIQPNGGSLAIT 533
Query: 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQA 682
PS + + VLQEIG+ C SKVEFRS VS+ + + FSVEVLF EKIG+G+GKTR +AQ QA
Sbjct: 534 PS-VYVTVLQEIGRLCDSKVEFRSTVSSVRSMLFSVEVLFNNEKIGIGVGKTRDEAQVQA 592
Query: 683 AENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLRE 735
AE AL L Y++ P +G +D K + NGFL D S+++ +RE
Sbjct: 593 AEKALQNLENSYLSSGAPVAGVPKKDSRKSPGRSGNGFLEDATCSDNDISMRE 645
>gi|293334643|ref|NP_001168634.1| uncharacterized protein LOC100382420 [Zea mays]
gi|223949721|gb|ACN28944.1| unknown [Zea mays]
gi|414879623|tpg|DAA56754.1| TPA: hypothetical protein ZEAMMB73_254643 [Zea mays]
Length = 623
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 302/473 (63%), Positives = 364/473 (76%), Gaps = 5/473 (1%)
Query: 10 VYHGDVCLGELDTILV---SDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
++HG+ LGE++ + + FP NEIR+ H SP+SERC PL+IL TI+ FS+RCK
Sbjct: 36 MFHGESFLGEMEVFPMKRDGEGGLPFPTNEIRVSHFSPASERCPPLAILQTIAPFSVRCK 95
Query: 67 LESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLY 126
L++ P L L+ +CF EFK+AVVV+GDEE+HLVAMP+K K PCFWC S SGLY
Sbjct: 96 LQTKLTPPNPGLQRLYLTCFNEFKSAVVVVGDEELHLVAMPTKSGKVPCFWCCSARSGLY 155
Query: 127 NSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKR 186
+ +GMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L + E D IR +GMSAE+KR
Sbjct: 156 AASVGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEMLSRRMDVEDDPIRIAGMSAEIKR 215
Query: 187 YMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINP 246
Y++D+ LLK++ + D V DNGK+ Q+EEV P S ER+ RPVIR+P+RN +LTRINP
Sbjct: 216 YIEDKELLKEFIDMDTVTDNGKIVGTQKEEVQPMSGGQERVFRPVIRLPDRNAILTRINP 275
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
ENRDTSV V+LRPAWE+LRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPEG+LI +
Sbjct: 276 ENRDTSVFVKLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLISPQ 335
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYA 366
QL +RV CVKSGS+KSL NVF+ CHPKMAMVIDDR VW+DKDQ RVHVVPA+ PYYA
Sbjct: 336 QLSERVNCVKSGSKKSLQNVFRDRRCHPKMAMVIDDRLNVWDDKDQHRVHVVPAYIPYYA 395
Query: 367 PQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYL 426
PQAE ANAVPVLCVARNVACNVRG FF+EFDENLLR + E++YE+ ++LP APDV +YL
Sbjct: 396 PQAEMANAVPVLCVARNVACNVRGGFFREFDENLLRKVFELYYENGLLDLPYAPDVGDYL 455
Query: 427 MSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSG--LPSMKNSSD 477
+ ED +F P AP+ EG+ G EVE+RLN ++ G +PS S D
Sbjct: 456 VCEDTSFVPGNKDQAPIPEGMRGTEVEKRLNGQSYRWEQREGQQMPSSIRSPD 508
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 25/257 (9%)
Query: 449 GLEVERRLNQSDEK-----YVVDSGLPSMKNSSDLKSETSLLPVA--VASNATVPATVVP 501
+ ++ RLN D+K +VV + +P +++ + +L VA VA N
Sbjct: 366 AMVIDDRLNVWDDKDQHRVHVVPAYIPYYAPQAEMANAVPVLCVARNVACNVR------- 418
Query: 502 SQKPGLLGAPIRR-DNSSMKHGFDLRNQNSAQPPLPKLHGQGGWIVEEEVNRVLPNNRPV 560
G R D + ++ F+L +N LP G ++V E+ + V N
Sbjct: 419 -------GGFFREFDENLLRKVFELYYENGLLD-LPYAPDVGDYLVCEDTSFVPGNKDQA 470
Query: 561 SIATGLPSHASQAK-GEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKT 619
I G+ + + ++ Q +P + + P+ + R GG
Sbjct: 471 PIPEGMRGTEVEKRLNGQSYRWEQREGQQMPSSIRSPDDEGMPIRGTGGVRNIQPNGGSL 530
Query: 620 NLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQ 679
+ PS + + VLQEIG+ C SKVEFRS VS+ + + FSVEVLF EKIG+G+GKTR +AQ
Sbjct: 531 AITPS-VYVTVLQEIGRLCDSKVEFRSTVSSVRSMLFSVEVLFNNEKIGIGVGKTRDEAQ 589
Query: 680 QQAAENALHYLAEKYVA 696
QAAE AL L +Y++
Sbjct: 590 VQAAEKALQNLESEYIS 606
>gi|357125934|ref|XP_003564644.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Brachypodium distachyon]
Length = 713
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/465 (64%), Positives = 365/465 (78%), Gaps = 7/465 (1%)
Query: 10 VYHGDVCLGELDTILVS---DENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
++HGDV LGE + + + FP+NEIRI H+SP+SERC PL+IL TI+ FS+RCK
Sbjct: 3 MFHGDVFLGETEVFSIKPGPEGTLPFPSNEIRISHLSPASERCPPLAILQTIAPFSVRCK 62
Query: 67 LESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYSVSSGLY 126
L++ P L L+ +CF E+K+AVVV+GDEE+HLVAMPSK +K PCFWC SV +GLY
Sbjct: 63 LQAKPLPPHPSLHRLYITCFNEYKSAVVVVGDEELHLVAMPSKVEKVPCFWCCSVRAGLY 122
Query: 127 NSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKR 186
+ +GMLNLRCLAIVFDLDETLIVANTMKSFE RIE L + E D +R +GMSAE+KR
Sbjct: 123 AASVGMLNLRCLAIVFDLDETLIVANTMKSFEGRIEMLSRRMDVEDDPVRVAGMSAEIKR 182
Query: 187 YMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINP 246
Y++DR LLK++ + D V DNG++ Q+EEV P ER+VRPVIR+PERN +LTRINP
Sbjct: 183 YIEDRELLKEFIDTDTVTDNGRIIGTQKEEVQPMPGVQERLVRPVIRLPERNAILTRINP 242
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
E RDTSV V+LRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALE+WRLLDPE +LI
Sbjct: 243 EIRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEIWRLLDPEANLISLN 302
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYA 366
L +RVVCVK+ SRKSL +VF+ G CHPKMAMVIDDR +VW++KDQPRVHVVPA+ PYYA
Sbjct: 303 NLSERVVCVKADSRKSLQHVFKEGGCHPKMAMVIDDRLQVWDEKDQPRVHVVPAYAPYYA 362
Query: 367 PQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYL 426
PQAE ANAVPVLCVARNVACNVRG FF+EFDENLL+ + E+ YE+E ++LP APDV +YL
Sbjct: 363 PQAEMANAVPVLCVARNVACNVRGGFFREFDENLLKKVFELLYENELLDLPYAPDVGDYL 422
Query: 427 MSEDANFAPNGSTNAPMSEGLNGLEVERRLN----QSDEKYVVDS 467
+ ED NF P+ P+ EG++G E+E+RLN Q D++ + S
Sbjct: 423 VCEDTNFVPSNKDPPPIPEGMSGAEIEKRLNGRAYQGDQRQISSS 467
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 23/230 (10%)
Query: 515 DNSSMKHGFDLRNQNSAQPPLPKLHGQGGWIVEEEVNRVLPNNRPVSIATGLPSHASQAK 574
D + +K F+L +N LP G ++V E+ N V N P I G+ S A+
Sbjct: 393 DENLLKKVFELLYENELLD-LPYAPDVGDYLVCEDTNFVPSNKDPPPIPEGM----SGAE 447
Query: 575 GEEAI--MAHDLHKQNLPPASQ-------PPEIGVSQNHVSSNSREFLTEGGKTNLLPSY 625
E+ + A+ ++ + +++ P +S ++V N GG + PS
Sbjct: 448 IEKRLNGRAYQGDQRQISSSTRSADDVRVPIRATLSGSNVQPN-------GGSLAITPST 500
Query: 626 LSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAEN 685
+ VLQEIG+ C+SKVEFRS VSTSK QFSVEVLF+ EKIG+G+GKTR +AQ AAE
Sbjct: 501 F-VTVLQEIGRLCNSKVEFRSTVSTSKITQFSVEVLFSNEKIGIGIGKTRDEAQVLAAEK 559
Query: 686 ALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLRE 735
AL L Y++++ P G +++D K S NGFL D + S+ + ++E
Sbjct: 560 ALRNLESNYLSFVAPIGGVLNKDTSK-SPRGGNGFLEDVMDSDGDIAMQE 608
>gi|357164847|ref|XP_003580187.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform 1 [Brachypodium distachyon]
Length = 937
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 362/796 (45%), Positives = 481/796 (60%), Gaps = 102/796 (12%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTISS--FS 62
K++VY G + +G++D + N EIR+ +SP SERC PL++LHT+SS
Sbjct: 3 KSVVYFGHIPIGDVDVWPKGETNLAAAAWVREIRLDRLSPPSERCPPLAVLHTVSSRCLV 62
Query: 63 LRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFP---CFWCY 119
+ +L +A P L+++H +C + KTAV +G EEIHLVAM K + P CFW Y
Sbjct: 63 MESRLTVTADEPPPPLVDMHTACLRDNKTAVFPLGAEEIHLVAMKDK-RNLPNHVCFWAY 121
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
+ GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI+AL+ ++ E D R SG
Sbjct: 122 KLPLGLYNSCLSMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRKLSNETDPQRISG 181
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNL 239
M AE+KRY DDR++LKQY E+D V+D GKV+KVQ E VPP ++N + ++RP+IR+ E+++
Sbjct: 182 MLAEIKRYQDDRSMLKQYIESDQVIDGGKVYKVQSEVVPPLADNPQPMIRPIIRLQEKSI 241
Query: 240 VLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299
+ TRINP RDTSVLVRLRPAW+DLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLDP+
Sbjct: 242 IFTRINPSIRDTSVLVRLRPAWDDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPD 301
Query: 300 GHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
LI S QL DR+VCVKSGSRKSLLNVF G CHP MA+VIDDR KVW++KDQ RVHVVP
Sbjct: 302 SRLINSVQLPDRLVCVKSGSRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQGRVHVVP 361
Query: 360 AFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAA 419
AF+PYYAPQAE +PVLCVARN+ACNVRG FFKEFDE LL ISEV ++DE ++P+A
Sbjct: 362 AFSPYYAPQAEENFPIPVLCVARNIACNVRGGFFKEFDEGLLPWISEVHFDDELNHVPSA 421
Query: 420 PDVSNYLMSEDANFAPNGSTNAPMS-EGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDL 478
PDV NYL+SED + + P++ +G+ G EVERRL ++ S++ +
Sbjct: 422 PDVGNYLVSEDESASILSVNKDPLAFDGMAGPEVERRLKEAGH---------SVQTVGPI 472
Query: 479 KSETSLLPVAVASNATVPATV--------VP---SQKPG--------LLGAPIRRDNSS- 518
+ ++ VA P+++ VP Q P L G+P R +
Sbjct: 473 TTNVDVMSVASNQQLVTPSSIPLAPVLGMVPLNNVQGPQYQSAIVDPLQGSPAREEGEVP 532
Query: 519 --------------MKHGFDLRNQN---------SAQPPLPKLHGQGG------WIVEEE 549
++HG D R+ Q +P + QG W+
Sbjct: 533 ESELDPDTRRRLLILQHGQDTRDPTPPFPAEPSVEVQVSVPPVQSQGNSFFMEDWMDPRS 592
Query: 550 VNRV---LP-NNRPVSIATGLPSHASQAKGEEAIMAHD-LHKQNLPPASQPP---EIGVS 601
++R P + V P S G + ++ D + QN SQ P + +
Sbjct: 593 LDRTSMGFPLESDSVHYDKKQPPQPSYFHGGDDHLSSDRFNYQNQRYTSQLPHSEDCRML 652
Query: 602 QNHVSSNSREFLTEGGKTNLLPS-----------------YLSIGVLQEIGKRCSSKVEF 644
N + R F EG T L S S GVLQEI +C KVE+
Sbjct: 653 PNQAPTTYRSFSGEGTATQRLHSGQRSGQLESGHQFVQYTETSGGVLQEIAAKCGFKVEY 712
Query: 645 RSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGA 704
+S + + +L+FS+EV GEK+G GMG+TRK+AQ+QAA+ +L LA+K++++
Sbjct: 713 QSTLCDTAELRFSIEVWVLGEKVGEGMGRTRKEAQRQAADISLRNLADKFLSF------- 765
Query: 705 MDRDFDKLSLENENGF 720
D DK+++ +NGF
Sbjct: 766 ---DPDKMTVLKDNGF 778
>gi|357164850|ref|XP_003580188.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform 2 [Brachypodium distachyon]
Length = 926
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 359/785 (45%), Positives = 480/785 (61%), Gaps = 91/785 (11%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTISS--FS 62
K++VY G + +G++D + N EIR+ +SP SERC PL++LHT+SS
Sbjct: 3 KSVVYFGHIPIGDVDVWPKGETNLAAAAWVREIRLDRLSPPSERCPPLAVLHTVSSRCLV 62
Query: 63 LRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFP---CFWCY 119
+ +L +A P L+++H +C + KTAV +G EEIHLVAM K + P CFW Y
Sbjct: 63 MESRLTVTADEPPPPLVDMHTACLRDNKTAVFPLGAEEIHLVAMKDK-RNLPNHVCFWAY 121
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
+ GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI+AL+ ++ E D R SG
Sbjct: 122 KLPLGLYNSCLSMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRKLSNETDPQRISG 181
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNL 239
M AE+KRY DDR++LKQY E+D V+D GKV+KVQ E VPP ++N + ++RP+IR+ E+++
Sbjct: 182 MLAEIKRYQDDRSMLKQYIESDQVIDGGKVYKVQSEVVPPLADNPQPMIRPIIRLQEKSI 241
Query: 240 VLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299
+ TRINP RDTSVLVRLRPAW+DLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLDP+
Sbjct: 242 IFTRINPSIRDTSVLVRLRPAWDDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPD 301
Query: 300 GHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
LI S QL DR+VCVKSGSRKSLLNVF G CHP MA+VIDDR KVW++KDQ RVHVVP
Sbjct: 302 SRLINSVQLPDRLVCVKSGSRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQGRVHVVP 361
Query: 360 AFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAA 419
AF+PYYAPQAE +PVLCVARN+ACNVRG FFKEFDE LL ISEV ++DE ++P+A
Sbjct: 362 AFSPYYAPQAEENFPIPVLCVARNIACNVRGGFFKEFDEGLLPWISEVHFDDELNHVPSA 421
Query: 420 PDVSNYLMSEDANFAPNGSTNAPMS-EGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDL 478
PDV NYL+SED + + P++ +G+ G EVERRL ++ S++ +
Sbjct: 422 PDVGNYLVSEDESASILSVNKDPLAFDGMAGPEVERRLKEAGH---------SVQTVGPI 472
Query: 479 KSETSLLPVAVASNATVPATV--------VP---SQKPG--------LLGAPIRRDNSS- 518
+ ++ VA P+++ VP Q P L G+P R +
Sbjct: 473 TTNVDVMSVASNQQLVTPSSIPLAPVLGMVPLNNVQGPQYQSAIVDPLQGSPAREEGEVP 532
Query: 519 --------------MKHGFDLRNQN---------SAQPPLPKLHGQGG------WIVEEE 549
++HG D R+ Q +P + QG W+
Sbjct: 533 ESELDPDTRRRLLILQHGQDTRDPTPPFPAEPSVEVQVSVPPVQSQGNSFFMEDWMDPRS 592
Query: 550 VNRV---LP-NNRPVSIATGLPSHASQAKGEEAIMAHD-LHKQNLPPASQPP---EIGVS 601
++R P + V P S G + ++ D + QN SQ P + +
Sbjct: 593 LDRTSMGFPLESDSVHYDKKQPPQPSYFHGGDDHLSSDRFNYQNQRYTSQLPHSEDCRML 652
Query: 602 QNHVSSNSREF------LTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQ 655
N + R F E G + + S GVLQEI +C KVE++S + + +L+
Sbjct: 653 PNQAPTTYRSFSGQRSGQLESGHQFVQYTETSGGVLQEIAAKCGFKVEYQSTLCDTAELR 712
Query: 656 FSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLE 715
FS+EV GEK+G GMG+TRK+AQ+QAA+ +L LA+K++++ D DK+++
Sbjct: 713 FSIEVWVLGEKVGEGMGRTRKEAQRQAADISLRNLADKFLSF----------DPDKMTVL 762
Query: 716 NENGF 720
+NGF
Sbjct: 763 KDNGF 767
>gi|224140399|ref|XP_002323570.1| predicted protein [Populus trichocarpa]
gi|222868200|gb|EEF05331.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 313/460 (68%), Positives = 357/460 (77%), Gaps = 26/460 (5%)
Query: 1 MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISS 60
MSRLG+K+ VYHG+VCLGELD I V+++ F FPNNEIRI HIS SERC PLSIL TIS
Sbjct: 1 MSRLGFKSPVYHGEVCLGELDVIPVTEKGFLFPNNEIRIHHISQQSERCPPLSILQTISP 60
Query: 61 FSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYS 120
FS+RCKLESS+P+EQ HLINLHASCF+E KTAVV+IGDEEIHLVAMPSKQKKFPCFWC++
Sbjct: 61 FSVRCKLESSSPMEQSHLINLHASCFHEVKTAVVLIGDEEIHLVAMPSKQKKFPCFWCFA 120
Query: 121 VSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGM 180
V GLY+SCL MLN+RCL+IVFDLDETLIVANTMK FEDRIE LR WI RE D +R SGM
Sbjct: 121 VPVGLYDSCLRMLNMRCLSIVFDLDETLIVANTMKLFEDRIETLRGWIGREQDPMRVSGM 180
Query: 181 SAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLV 240
AE+KRY+DDR LLKQY END VMDNGK++KVQ E+V S+ HER+VRPVIR+PE+N+V
Sbjct: 181 IAEMKRYIDDRLLLKQYIENDVVMDNGKMYKVQLEDVLRSSDGHERVVRPVIRLPEKNIV 240
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
LTRINPE RDTSVLVRLRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 241 LTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEA 300
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA 360
HLI SKQL DRVVCVKSG+R L +F C P+ + K D DQPRVH
Sbjct: 301 HLIASKQLSDRVVCVKSGNR--LQEIFIE--CLPRWHV----PSKNGNDMDQPRVHSY-- 350
Query: 361 FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAP 420
C+ C V +EFDE L+R ISEVFYEDE +LP P
Sbjct: 351 ----------------CYCMRIIYNCIVTCYVHREFDEILIRRISEVFYEDEVKSLPPTP 394
Query: 421 DVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSD 460
DVSNY+M+ED+ F PNG+ AP SEG++G+E ERRL+QS+
Sbjct: 395 DVSNYMMTEDSGFVPNGNNIAPFSEGMSGIEAERRLHQSN 434
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 104/144 (72%), Gaps = 18/144 (12%)
Query: 603 NHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLF 662
NHVSS+SREF E GK NLLPS+LSIGVLQEIG+RC SKV LF
Sbjct: 434 NHVSSSSREFQAEAGKLNLLPSHLSIGVLQEIGRRCRSKV------------------LF 475
Query: 663 TGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLW 722
TGEKIGVGMGKTRKDAQQQAAENAL LAEKY AY++P SGA+D DFDKLS+ NENGF+W
Sbjct: 476 TGEKIGVGMGKTRKDAQQQAAENALCSLAEKYAAYVSPNSGAVDGDFDKLSIGNENGFVW 535
Query: 723 DTIISESNEGLREDGLRKESTPEA 746
D ES++ +REDG KE E
Sbjct: 536 DISSPESSDLVREDGSAKERPSEV 559
>gi|260447031|emb|CBG76444.1| OO_Ba0013J05-OO_Ba0033A15.31 [Oryza officinalis]
Length = 1333
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 375/826 (45%), Positives = 490/826 (59%), Gaps = 110/826 (13%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTISSFSLR 64
K++VY+G+ +G ++ + + EIR+ +S SERC PL++LH +++ R
Sbjct: 5 KSVVYYGNTSIGHVEVWPKGETDLAVAAWAREIRVDRLSLPSERCPPLAVLHAVAAGG-R 63
Query: 65 CKLESSAPVEQ-----PHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFW 117
C + S P P L+ +HA+C + KTAV +G EEIHLVAM SK+ CFW
Sbjct: 64 CLVMESGPTATADEPPPPLVAMHAACLRDGKTAVFPLGAEEIHLVAMASKRNLPNLACFW 123
Query: 118 CYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRA 177
Y V SGLYNSCL MLNLRCL IVFDLDETL+VANT +SFEDRI+AL+ ++ E D
Sbjct: 124 GYKVPSGLYNSCLSMLNLRCLGIVFDLDETLLVANTTRSFEDRIDALQRKLSNEIDPQHI 183
Query: 178 SGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPER 237
SGMSAE+KRY +DR++LKQY E+D V D GKV+KV E +PP NH+ + RPVIR+PE+
Sbjct: 184 SGMSAEIKRYQEDRSILKQYIESDQVTDGGKVYKVHTEVIPPLPGNHQPMTRPVIRLPEK 243
Query: 238 NLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLD 297
N++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLD
Sbjct: 244 NIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLD 303
Query: 298 PEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHV 357
P+ LI S QL DR+VCVKSGSRKSLLNVF G CHP+MA+VIDDR KVW++KDQ RVH+
Sbjct: 304 PDSRLINSVQLTDRLVCVKSGSRKSLLNVFHDGSCHPEMALVIDDRLKVWDEKDQSRVHI 363
Query: 358 VPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLP 417
VPAF+PYY+PQAE +VPVLC ARNVACNVRG FFKEFDE LL ISE+ YEDE + P
Sbjct: 364 VPAFSPYYSPQAEANFSVPVLCFARNVACNVRGGFFKEFDEVLLPRISEIHYEDELNDFP 423
Query: 418 AAPDVSNYLMSEDANFAPNGSTNAPMS-EGLNGLEVERRLNQSDEKYVVDSGLPS----M 472
+APDV NYL++ED N A P++ +G+ EVERRL ++ + +P+ M
Sbjct: 424 SAPDVGNYLITEDENAAILNVNRDPLAFDGMADAEVERRLKEASCSVQAVNPIPTNADVM 483
Query: 473 KNSSDLKSETSLLPVA--------------------VASNATVPATVVPSQKPG-----L 507
+ + + TS +PVA S P+ P+++ G
Sbjct: 484 PVAPNQQLITSSVPVAPSLGLNNDQGPQPSSFSWPVAQSTPGEPSQGSPAREEGEVPESE 543
Query: 508 LGAPIRRDNSSMKHGFDLRNQNSAQPPLPK----------LHGQGGWI-VEEEVN-RVLP 555
L RR ++HG D+R+ PP P + G W VE+E+N R L
Sbjct: 544 LDPDTRRRLLILQHGQDMRD---PAPPCPAGSPVQTSVLPVQSHGNWSHVEDEMNPRSL- 599
Query: 556 NNRPVSIATGL-------------PSHASQAKGEEAIMA--------------------- 581
NR +TG P + S E+ ++
Sbjct: 600 -NR---TSTGFHLESDAINYDKKQPHNPSYFPDEDNLITSDRYNRRSHRYPSQLPHSEDH 655
Query: 582 HDLHKQNLPPASQPPEIGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSK 641
H L++ ++ S P E + SN R E G + + S GVL+EI C K
Sbjct: 656 HMLNRSSIAYRSFPGE-DIGTRFGPSNHRSSQIEPGHQFVQNAETSAGVLEEIAVECGFK 714
Query: 642 VEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPR 701
VE++S + ++ +LQFS+EV GEK+G G+GKTRK A++QA +L LAEK+++
Sbjct: 715 VEYQSTLCSTAELQFSIEVRILGEKVGEGIGKTRKAAKRQAVNMSLRNLAEKFLS----- 769
Query: 702 SGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
D DK+ + ENGF + SN G R + +P AS
Sbjct: 770 -----SDPDKMMILKENGF-----SNNSNSFRYSGGNRDDISPVAS 805
>gi|357136733|ref|XP_003569958.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform 2 [Brachypodium distachyon]
Length = 927
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 371/810 (45%), Positives = 486/810 (60%), Gaps = 86/810 (10%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTISSFSLR 64
K++VY+G+ +GE++ + N + EIR+ +SP SERC+PL +LHT++ R
Sbjct: 3 KSMVYYGNTSIGEVELWPKGETNLGAASWAREIRVDRLSPPSERCVPLVVLHTVA-VGAR 61
Query: 65 CKLESSAPVEQ-----PHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKF--PCFW 117
C + S P++ P L+ +HA+C + KTAVV +G+EE+HLVAM S++ CFW
Sbjct: 62 CLVMESRPLKAADEPPPPLVAMHAACLRDNKTAVVSLGEEELHLVAMTSRRNLMNQACFW 121
Query: 118 CYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRA 177
Y V GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI++L+ + E D R
Sbjct: 122 GYKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDSLQRKLNNETDPQRI 181
Query: 178 SGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPER 237
+GM AE+KRY DD+++LKQY E D V D+GK++KVQ E VPP S+N + + RPVIR+ E+
Sbjct: 182 NGMLAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPEIVPPLSDNRQSLTRPVIRLQEK 241
Query: 238 NLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLD 297
N++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLD
Sbjct: 242 NIILTRINPSIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLD 301
Query: 298 PEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHV 357
P+ LI S QL DR+VCVKSG RKSLLNVF G CHP MA++IDDR KVW++KDQ RVHV
Sbjct: 302 PDSRLINSVQLSDRMVCVKSGLRKSLLNVFHDGSCHPGMALIIDDRLKVWDEKDQSRVHV 361
Query: 358 VPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLP 417
VPAFTPYYAPQAE ++PVLCVARNVACNVRG FFK+FDE LL IS V YED ++P
Sbjct: 362 VPAFTPYYAPQAEANFSIPVLCVARNVACNVRGGFFKDFDEALLPRISNVVYEDVIHDIP 421
Query: 418 AAPDVSNYLMSEDANFAP-NGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNS- 475
+APDV NYL+SED N NG+ + + +G E ERR+ ++ S L + S
Sbjct: 422 SAPDVGNYLISEDDNVGVVNGNRDLLVFDGTADAEGERRMKEASG---AGSALNPIAASF 478
Query: 476 -SDLKSETSLLPVAVASNATVPATV-------------VPSQKPGLL----GAPIRRDNS 517
+ + +P +VA AT P + P + GLL G+P R +
Sbjct: 479 VMPVAPGQNFVPSSVAPFATPPGMMPLINSLVPQPPFSQPVAQAGLLDPLQGSPAREEGE 538
Query: 518 S---------------MKHGFDLRNQNSAQPPLPKLH--------GQGGWIVEEEVNRVL 554
++HG D R+ P +P + + + VE+ +N
Sbjct: 539 VPESELDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPNENWYPVEDGMN--- 595
Query: 555 PNNR-------PVSIATGLPSHASQAKGEEAIMAHD---LHKQNLPPA-SQPPEIGVSQN 603
PNN PV P + G+ ++ D Q PP + + + QN
Sbjct: 596 PNNLNRGTTGFPVESVKQPPQPSYFHGGDNNPVSSDRFNYQNQRFPPQLTHAEDDHMLQN 655
Query: 604 HVSSNSREF------LTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFS 657
R F E G+ S+G+L+EI + SKVE+RS + + +LQFS
Sbjct: 656 PAPPRFRSFPGQRNNQIESGQNFARNVGTSVGILEEIAPKSGSKVEYRSTLCDTTELQFS 715
Query: 658 VEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENE 717
+EV GE++G G+G TR++AQ QAAE +L LA KY+ D +K++ NE
Sbjct: 716 IEVWIVGERVGEGIGGTRREAQWQAAEMSLRNLANKYLL----------SDPNKITDVNE 765
Query: 718 NGFLWDTIISESNEGLREDGLRKESTPEAS 747
NGF + +E R D L ST E S
Sbjct: 766 NGFGSNQNFFGYSESNRNDRLPVASTSEES 795
>gi|357136731|ref|XP_003569957.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform 1 [Brachypodium distachyon]
Length = 938
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 373/821 (45%), Positives = 486/821 (59%), Gaps = 97/821 (11%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPN--NEIRIRHISPSSERCIPLSILHTISSFSLR 64
K++VY+G+ +GE++ + N + EIR+ +SP SERC+PL +LHT++ R
Sbjct: 3 KSMVYYGNTSIGEVELWPKGETNLGAASWAREIRVDRLSPPSERCVPLVVLHTVA-VGAR 61
Query: 65 CKLESSAPVEQ-----PHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKF--PCFW 117
C + S P++ P L+ +HA+C + KTAVV +G+EE+HLVAM S++ CFW
Sbjct: 62 CLVMESRPLKAADEPPPPLVAMHAACLRDNKTAVVSLGEEELHLVAMTSRRNLMNQACFW 121
Query: 118 CYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRA 177
Y V GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI++L+ + E D R
Sbjct: 122 GYKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDSLQRKLNNETDPQRI 181
Query: 178 SGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPER 237
+GM AE+KRY DD+++LKQY E D V D+GK++KVQ E VPP S+N + + RPVIR+ E+
Sbjct: 182 NGMLAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPEIVPPLSDNRQSLTRPVIRLQEK 241
Query: 238 NLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLD 297
N++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLD
Sbjct: 242 NIILTRINPSIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLD 301
Query: 298 PEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHV 357
P+ LI S QL DR+VCVKSG RKSLLNVF G CHP MA++IDDR KVW++KDQ RVHV
Sbjct: 302 PDSRLINSVQLSDRMVCVKSGLRKSLLNVFHDGSCHPGMALIIDDRLKVWDEKDQSRVHV 361
Query: 358 VPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLP 417
VPAFTPYYAPQAE ++PVLCVARNVACNVRG FFK+FDE LL IS V YED ++P
Sbjct: 362 VPAFTPYYAPQAEANFSIPVLCVARNVACNVRGGFFKDFDEALLPRISNVVYEDVIHDIP 421
Query: 418 AAPDVSNYLMSEDANFAP-NGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNS- 475
+APDV NYL+SED N NG+ + + +G E ERR+ E S L + S
Sbjct: 422 SAPDVGNYLISEDDNVGVVNGNRDLLVFDGTADAEGERRMK---EASGAGSALNPIAASF 478
Query: 476 -SDLKSETSLLPVAVASNATVPATV-------------VPSQKPGLL----GAPIRRDNS 517
+ + +P +VA AT P + P + GLL G+P R +
Sbjct: 479 VMPVAPGQNFVPSSVAPFATPPGMMPLINSLVPQPPFSQPVAQAGLLDPLQGSPAREEGE 538
Query: 518 S---------------MKHGFDLRNQNSAQPPLPKLH--------GQGGWIVEEEVNRVL 554
++HG D R+ P +P + + + VE+ +N
Sbjct: 539 VPESELDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPNENWYPVEDGMN--- 595
Query: 555 PNNR-------PVSIATGLPSHASQAKGEEAIMAHD---LHKQNLPPA------------ 592
PNN PV P + G+ ++ D Q PP
Sbjct: 596 PNNLNRGTTGFPVESVKQPPQPSYFHGGDNNPVSSDRFNYQNQRFPPQLTHAEDDHMLQN 655
Query: 593 SQPPEI------GVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRS 646
PP ++ H+ S R E G+ S+G+L+EI + SKVE+RS
Sbjct: 656 PAPPRFRSFPGEDLTIWHIPSGQRNNQIESGQNFARNVGTSVGILEEIAPKSGSKVEYRS 715
Query: 647 VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMD 706
+ + +LQFS+EV GE++G G+G TR++AQ QAAE +L LA KY+
Sbjct: 716 TLCDTTELQFSIEVWIVGERVGEGIGGTRREAQWQAAEMSLRNLANKYLL---------- 765
Query: 707 RDFDKLSLENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
D +K++ NENGF + +E R D L ST E S
Sbjct: 766 SDPNKITDVNENGFGSNQNFFGYSESNRNDRLPVASTSEES 806
>gi|242062442|ref|XP_002452510.1| hypothetical protein SORBIDRAFT_04g027200 [Sorghum bicolor]
gi|241932341|gb|EES05486.1| hypothetical protein SORBIDRAFT_04g027200 [Sorghum bicolor]
Length = 934
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 366/814 (44%), Positives = 492/814 (60%), Gaps = 84/814 (10%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQFP----NNEIRIRHISPSSERCIPLSILHTISSF 61
+K++VY+G+ +GE++ + + EIR+ +SP SERC PL+++HT++
Sbjct: 2 FKSMVYYGNTSIGEVEVWPKGEASAGLAVAAWAREIRVDRLSPPSERCPPLAVMHTVAVG 61
Query: 62 SLRCKLESSAPVEQP----HLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPC 115
+ +ES PV L+ +HA+C + KTAVV +GD E+HLVAM S++ C
Sbjct: 62 ARCLVMESRPPVAADVAPMPLVAMHAACLRDNKTAVVPLGDGELHLVAMTSRRNLTNHAC 121
Query: 116 FWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQI 175
FW Y + GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI+ L+ ++ E D
Sbjct: 122 FWGYKLPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTSRSFEDRIDGLQRKLSNETDPQ 181
Query: 176 RASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIP 235
R +GM +E+KRY DD+++LKQY E D V D+GKV+K Q E VPP S+N + + RPVIR+
Sbjct: 182 RRNGMLSEIKRYQDDKSILKQYIEGDQVYDDGKVYKAQPEIVPPLSDNQQPMTRPVIRLQ 241
Query: 236 ERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRL 295
++N++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRL
Sbjct: 242 DKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRL 301
Query: 296 LDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRV 355
LDP+ LI S QL DR+VCVKSG +KSLLNVF G CHP MA+VIDDR KVW++KDQ RV
Sbjct: 302 LDPDSRLINSVQLHDRMVCVKSGLKKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQLRV 361
Query: 356 HVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVN 415
HVVPAFTPYYAPQAE ++PVLCVARNVACNVRG FFK+FDE LL IS V YEDE +
Sbjct: 362 HVVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVHYEDEVND 421
Query: 416 LPAAPDVSNYLMSEDANFA-PNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSG----LP 470
+ +APDV NYL++ED N A NG+ ++ +G+ EVERR+ +++ + + +P
Sbjct: 422 ISSAPDVGNYLITEDENAALVNGNRDSLPFDGMADAEVERRMKEANAQAFHQTAGNFVMP 481
Query: 471 SMKNSSDLKSETSLLPVAVASNATVPATVVPSQKPG----LLGAPIRRDNSS-------- 518
+ + S S+ P+A P P +PG L G+P R +
Sbjct: 482 VAPAQNFVSS--SVAPLAPPLGVMPPTFSQPVVQPGFSDSLQGSPAREEGEVPESELDPD 539
Query: 519 -------MKHGFDLRN-------QNSAQPPLPKLHGQGGWIVEEE------VNR----VL 554
++HG D+R+ Q P+P + G W E+ +NR
Sbjct: 540 TRRRLLILQHGQDIRDPTPPLPAIPPVQVPVPPVQPHGNWFPTEDGLNPSNLNRGSAGFT 599
Query: 555 PNNRPVSIATGLPSHASQAKGEEAIMAHD---LHKQNLP---PASQ---------PPEI- 598
+ P+ P H S G ++ M+ D Q P P ++ PP+
Sbjct: 600 VESDPMLYEKKQPPHPSFFHGGDSPMSSDRFGYQNQRFPSQLPHTEDHHMLQNHAPPKYR 659
Query: 599 -----GVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKD 653
++ HV S+ R E G+ + S G+L I +C SKVE+RS + + +
Sbjct: 660 SFSGEELAARHVPSSQRNNQIESGRHFAQYAGTSAGILDGIALKCGSKVEYRSTLCDTAE 719
Query: 654 LQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLS 713
LQFS+EV GEK+G G+G+TR++AQ +AAE +L LA KY++ D +KL+
Sbjct: 720 LQFSIEVWIVGEKVGEGIGRTRREAQHKAAEMSLRNLANKYLS----------SDPNKLT 769
Query: 714 LENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
ENGF + + + R+D L ST E S
Sbjct: 770 DMKENGFSGNRNVFGYSGNTRDDMLPLSSTSEES 803
>gi|242073788|ref|XP_002446830.1| hypothetical protein SORBIDRAFT_06g023330 [Sorghum bicolor]
gi|241938013|gb|EES11158.1| hypothetical protein SORBIDRAFT_06g023330 [Sorghum bicolor]
Length = 879
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 376/845 (44%), Positives = 500/845 (59%), Gaps = 120/845 (14%)
Query: 7 KNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRC- 65
K++VY+G+ +GE++ + + EIR+ +SP+SERC PL++LH +++ RC
Sbjct: 3 KSLVYYGNTPVGEVEVWPKGQTDLAWAR-EIRVDRLSPASERCPPLAVLHVVAA-GARCL 60
Query: 66 ----KLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFWCY 119
K ++A P L+ +H +C + KTAV +G EEIHLVAM SK+ CFW Y
Sbjct: 61 VMESKSTATAHEPPPPLVTMHTTCLKDNKTAVFPLGAEEIHLVAMTSKRNMPNGACFWGY 120
Query: 120 SVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASG 179
V GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI+A++ + E D R SG
Sbjct: 121 KVPLGLYNSCLSMLNLRCLGIVFDLDETLIVANTTRSFEDRIDAIQRKLNNEADPQRISG 180
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHER-IVRPVIRIPERN 238
M AE+KRY +D+++LKQY E+D V D G+++KVQ E +PP +NH++ + RP+IR+ E+N
Sbjct: 181 MLAEIKRYQEDKSILKQYIESDQVTDGGELYKVQSEVIPPLDDNHQQPMTRPIIRLQEKN 240
Query: 239 LVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298
++LTRINP RDTSVLVRLRPAW+DLRSYLIA+GRKRFE+YVCTMAERDYALEMWRLLDP
Sbjct: 241 IILTRINPSIRDTSVLVRLRPAWDDLRSYLIARGRKRFEIYVCTMAERDYALEMWRLLDP 300
Query: 299 EGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVV 358
+ LI S QLLDR+VCVKSGSRKSLLNVF G CHP MA+VIDDR KVW++ DQ RVHVV
Sbjct: 301 DSKLINSVQLLDRLVCVKSGSRKSLLNVFHDGSCHPGMALVIDDRLKVWDEWDQRRVHVV 360
Query: 359 PAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPA 418
PAF PYYAPQAE +PVLCVARNVACNVR FFKEFDE ++ I+EV YEDE ++ +
Sbjct: 361 PAFAPYYAPQAEANFPIPVLCVARNVACNVRAGFFKEFDEGIIPRITEVCYEDELDDIAS 420
Query: 419 APDVSNYLMSEDANFAPNGSTNAPMS-EGLNGLEVERRLNQSDEKYV------------- 464
APDV NY +SED N A + P++ +G+ EVE+R+ ++ +
Sbjct: 421 APDVCNYFVSEDENAAVSNVNKNPLAFDGMADAEVEKRMKEASSSFQSANPITTNVDVMS 480
Query: 465 ----------VDSGLPS-------MKNSSDLKSETSLLPVA----VASNATVPATVVPSQ 503
+ S P + N D + + PVA V S+ PA
Sbjct: 481 VAANQHFGTPISSSTPVAPPLGMLLNNDQDPQPPSLRWPVAQSGHVDSSQGSPAREEGEV 540
Query: 504 KPGLLGAPIRRDNSSMKHGFDLRNQNS-------AQPPLPKLHGQGGWI-VEEEVNRVLP 555
L RR ++HG D R+ + AQ +P + W +E+E+N P
Sbjct: 541 PESELDPDTRRRLLILQHGQDTRDPAAPFPAGSPAQVSVPPVQSHENWFCLEDEMN---P 597
Query: 556 NN-RPVSIATGLPS-----------HASQAKGEEAIMAHDLHK-QNLPPASQPPEIGVS- 601
N VS L S H S + M++D + QN SQPP
Sbjct: 598 RNLNKVSTEFHLESDSVHYDKKQLQHTSYIPIGDNPMSYDRYDYQNQRYPSQPPHSEGHH 657
Query: 602 --QNHVSSNSREFLTEGGKTNLLPS------YLSI-GVLQEIGKRCSSKVEFRSVVSTSK 652
NH + R F G +++ + S Y I GVL+EI +C KVE+RS + +
Sbjct: 658 RFHNHAPTAYRSF--SGQRSSHMESGRHFARYGGIPGVLEEIALKCGFKVEYRSTLCDTT 715
Query: 653 DLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKL 712
+LQFS EVL GEK+G G+GKTRK+AQ QAA+ +L LA+K++++ D DK+
Sbjct: 716 ELQFSTEVLIFGEKVGEGVGKTRKEAQWQAADTSLRNLADKFLSW----------DPDKV 765
Query: 713 SLENENGF-------------LWDT--IISESNEGL----REDGLRKESTPEASEVEPGS 753
++ EN F ++DT + S S+E R D LRK PG+
Sbjct: 766 TVLKENDFNRHPKSHRYPGSNIYDTLPVASTSDESRYMNDRIDTLRK----------PGA 815
Query: 754 TYASL 758
+ A+L
Sbjct: 816 SVAAL 820
>gi|359496595|ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Vitis vinifera]
Length = 860
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 326/614 (53%), Positives = 412/614 (67%), Gaps = 64/614 (10%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRC 65
YK+IVY GD +GE++ I ++ + EIRI H S SERC PL++LHTI+S +
Sbjct: 2 YKSIVYEGDDVVGEVE-IYPQNQGLEL-MKEIRISHYSQPSERCPPLAVLHTITSCGVCF 59
Query: 66 KLESS-APVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFWCYSVS 122
K+ESS A + L LH++C E KTAV+ +G+EE+HLVAM SK+K ++PCFW ++V+
Sbjct: 60 KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119
Query: 123 SGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSA 182
GLY+SCL MLNLRCL IVFDLDETLIVANTM+SFEDRI+AL+ I E D R SGM+A
Sbjct: 120 LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGMAA 179
Query: 183 ELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLT 242
E++RY DDR +LKQY END V++NGK+FK Q E VP S+NH+ IVRP+IR+ E+N++LT
Sbjct: 180 EVRRYQDDRNILKQYAENDQVVENGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKNIILT 239
Query: 243 RINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHL 302
RINP RDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDPE +L
Sbjct: 240 RINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNL 299
Query: 303 IGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFT 362
I SK+LLDR+VCVKSGSRKSL NVFQ G+CHPKMA+VIDDR KVW++KDQPRVHVVPAF
Sbjct: 300 INSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAFA 359
Query: 363 PYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDV 422
PYYAPQAE NA+ VLCVARNVACNVRG FFKEFDE LL+ I E+ YED+ ++ +APDV
Sbjct: 360 PYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDDIKDIRSAPDV 419
Query: 423 SNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKSET 482
SNYL+SED NG+ + P +G+ +EVER+L + PS S D +
Sbjct: 420 SNYLVSEDDASVSNGNRDQPCFDGMADVEVERKLKDA-------ISAPSTVTSLDPRLSP 472
Query: 483 SLLPVAVASNATVP-----ATVVP----------------SQKPGLLGAPIRRDNSS--- 518
L AS+ P +++P + +P + +P R +
Sbjct: 473 PLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPLAPEPTMQSSPAREEGEVPES 532
Query: 519 ------------MKHGFDLRNQNSAQPPL----------PKLHGQGGWIVEEE------V 550
++HG D R S+ PP P++ +G W +E +
Sbjct: 533 ELDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPADEEMSPRQL 592
Query: 551 NRVLPNNRPVSIAT 564
NR +P P+ T
Sbjct: 593 NRAVPKEFPLDSDT 606
>gi|297742899|emb|CBI35690.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 326/614 (53%), Positives = 413/614 (67%), Gaps = 64/614 (10%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRC 65
YK+IVY GD +GE++ I ++ + EIRI H S SERC PL++LHTI+S +
Sbjct: 2 YKSIVYEGDDVVGEVE-IYPQNQGLEL-MKEIRISHYSQPSERCPPLAVLHTITSCGVCF 59
Query: 66 KLESS-APVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFWCYSVS 122
K+ESS A + L LH++C E KTAV+ +G+EE+HLVAM SK+K ++PCFW ++V+
Sbjct: 60 KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119
Query: 123 SGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSA 182
GLY+SCL MLNLRCL IVFDLDETLIVANTM+SFEDRI+AL+ I E D R SGM+A
Sbjct: 120 LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGMAA 179
Query: 183 ELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLT 242
E++RY DDR +LKQY END V++NGK+FK Q E VP S+NH+ IVRP+IR+ E+N++LT
Sbjct: 180 EVRRYQDDRNILKQYAENDQVVENGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKNIILT 239
Query: 243 RINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHL 302
RINP RDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDPE +L
Sbjct: 240 RINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNL 299
Query: 303 IGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFT 362
I SK+LLDR+VCVKSGSRKSL NVFQ G+CHPKMA+VIDDR KVW++KDQPRVHVVPAF
Sbjct: 300 INSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAFA 359
Query: 363 PYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDV 422
PYYAPQAE NA+ VLCVARNVACNVRG FFKEFDE LL+ I E+ YED+ ++ +APDV
Sbjct: 360 PYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDDIKDIRSAPDV 419
Query: 423 SNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKSET 482
SNYL+SED NG+ + P +G+ +EVER+L + PS S D +
Sbjct: 420 SNYLVSEDDASVSNGNRDQPCFDGMADVEVERKLKDA-------ISAPSTVTSLDPRLSP 472
Query: 483 SLLPVAVASNATVP-----ATVVP----------------SQKPGLLGAPIRRDNSS--- 518
L AS+ P +++P + +P + +P R +
Sbjct: 473 PLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPLAPEPTMQSSPAREEGEVPES 532
Query: 519 ------------MKHGFDLRNQNSAQPP----------LPKLHGQGGWIVEEE------V 550
++HG D R S+ PP +P++ +G W +E +
Sbjct: 533 ELDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPADEEMSPRQL 592
Query: 551 NRVLPNNRPVSIAT 564
NR +P P+ T
Sbjct: 593 NRAVPKEFPLDSDT 606
>gi|413923217|gb|AFW63149.1| hypothetical protein ZEAMMB73_795279 [Zea mays]
Length = 932
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 367/814 (45%), Positives = 482/814 (59%), Gaps = 87/814 (10%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQFP----NNEIRIRHISPSSERCIPLSILHTISSF 61
+K++VY+ + +GE++ + + EIR+ ISP SERC PL+++HT++
Sbjct: 2 FKSMVYYVNTSIGEVEVWPKGEASAGLTMAAWAREIRVERISPPSERCPPLAVMHTVA-V 60
Query: 62 SLRCKLESS----APVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPC 115
RC + S P L+ +H +C E KTAVV +GDEE+HLVAM S++ C
Sbjct: 61 GARCLVMESRPPVVADVVPPLVVMHTACLRENKTAVVPLGDEELHLVAMTSRRNLTNHAC 120
Query: 116 FWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQI 175
FW Y + GLYNSCL MLNLRCL IVFDLDETLIVANT +SFEDRI+AL+ ++ E D
Sbjct: 121 FWGYKLPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTSRSFEDRIDALQRKLSNETDPQ 180
Query: 176 RASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIP 235
R +GM +E+KRY DD+++LKQY E D V D+GKV+K Q E VPP S+N + + RPVIR+
Sbjct: 181 RRNGMLSEIKRYQDDKSILKQYIEGDQVYDDGKVYKAQPEIVPPLSDNQQPMTRPVIRLQ 240
Query: 236 ERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRL 295
++N++LTRINP RDTSVLV LRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRL
Sbjct: 241 DKNIILTRINPLIRDTSVLVCLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRL 300
Query: 296 LDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRV 355
LDP+ LI S QL DR+VCVKSG +KSLLNVF G CHP MA+VIDDR KVW++KDQ RV
Sbjct: 301 LDPDSRLINSVQLHDRMVCVKSGLKKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQLRV 360
Query: 356 HVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVN 415
HVVPAFTPYYAPQAE ++PVLCVARNVACNVRG FFK+FDE LL IS V YEDE VN
Sbjct: 361 HVVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVHYEDE-VN 419
Query: 416 LPAAPDVSNYLMSEDANFA-PNGSTNAPMSEGLNGLEVERRLN----QSDEKYVVDSGLP 470
+APDV NYL+++D N A NG+ ++ +G+ EVERR+ QS + D +P
Sbjct: 420 EISAPDVGNYLITDDENVALVNGNRDSLPFDGMADAEVERRMKEANAQSFHQTAGDFVMP 479
Query: 471 SMKNSSDLKSETSLL--PVAVASNATVPATVVPSQKPGLLGAPIRRDNSS---------- 518
+ + + + L P+ + + P L G+P R +
Sbjct: 480 VAPAQNFVSTSVASLAPPLGMMPSPFSQPVAPPGFSDSLQGSPAREEGEVPESELDPDTR 539
Query: 519 -----MKHGFDLRNQNSAQPPLPKL----------HGQGGWI-VEEEVNRVLPNNRPVSI 562
++HG D R+ S PLP + G W E+ +N+ N
Sbjct: 540 RRLLILQHGQDTRDPTS---PLPAIPPVQVPVPPVQPHGNWFPTEDGINQSNLNRGSAGF 596
Query: 563 AT---------GLPSHASQAKGEEAIMAHD---LHKQNLP--------PASQ---PPEI- 598
P H S G ++ M D Q P P Q PP+
Sbjct: 597 TVESDSIVYEKKQPPHPSFFHGGDSPMPSDRFGYQNQRFPSQLPHEDHPMMQNHAPPKYR 656
Query: 599 -----GVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKD 653
++ HV S+ R E G+ + S G+L+ I +C SKVE++S + + +
Sbjct: 657 SFSGEELASWHVPSSQRNNQIESGRHFAQYAGTSAGILEGIALKCGSKVEYKSALCDTAE 716
Query: 654 LQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLS 713
LQFS+EV GEK+G G+G+TR++AQ+QAAE +L LA KY++ D +KLS
Sbjct: 717 LQFSIEVWIVGEKVGEGIGRTRREAQRQAAEMSLRNLANKYLS----------SDPNKLS 766
Query: 714 LENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
EN F + + + R+D L ST E S
Sbjct: 767 DMKENDFSSNRNVFGYSGNTRDDMLPLSSTSEES 800
>gi|147832855|emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
Length = 894
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 360/790 (45%), Positives = 467/790 (59%), Gaps = 124/790 (15%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRC 65
YK+IVY GD +GE++ I ++ + EIRI H S SERC PL++LHTI+S +
Sbjct: 2 YKSIVYEGDDVVGEVE-IYPQNQGLEL-MKEIRISHYSQPSERCPPLAVLHTITSCGVCF 59
Query: 66 KLESS-APVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFWCYSVS 122
K+ESS A + L LH++C E KTAV+ +G+EE+HLVAM SK+K ++PCFW ++V+
Sbjct: 60 KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119
Query: 123 SGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSA 182
GLY+SCL MLNLRCL IVFDLDETLIVANTM+SFEDRI+AL+ I E D R SGM A
Sbjct: 120 LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGMVA 179
Query: 183 ELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLT 242
E V++NGK+FK Q E VP S+NH+ IVRP+IR+ E+N++LT
Sbjct: 180 E-------------------VVENGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKNIILT 220
Query: 243 RINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHL 302
RINP RDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDPE +L
Sbjct: 221 RINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNL 280
Query: 303 IGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFT 362
I SK+LLDR+VCVKSGSRKSL NVFQ G+CHPKMA+VIDDR KVW++KDQPRVHVVPAF
Sbjct: 281 INSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAFA 340
Query: 363 PYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDV 422
PYYAPQAE NA+ VLCVARNVACNVRG FFKEFDE LL+ I E+ YED+ ++ +APDV
Sbjct: 341 PYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDBIKDIRSAPDV 400
Query: 423 SNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKSET 482
SNYL+SED NG+ + P +G+ +EVER+L + PS S D +
Sbjct: 401 SNYLVSEDDASVSNGNRDQPCFDGMADVEVERKLKDA-------ISAPSTVTSLDPRLSP 453
Query: 483 SLLPVAVASNATVP-----ATVVP----------------SQKPGLLGAPIRRDNSS--- 518
L AS+ P +++P + +P + +P R +
Sbjct: 454 PLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPLAPEPTMQSSPAREEGEVPES 513
Query: 519 ------------MKHGFDLRNQNSAQPPL----------PKLHGQGGWIVEEE------V 550
++HG D R S+ PP P++ +G W +E +
Sbjct: 514 ELDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPADEEMSPRQL 573
Query: 551 NRVLPNNRPVSIATGLPSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNHVSSN-- 608
NR +P P+ T M + H+ + P E S + +
Sbjct: 574 NRAVPKEFPLDSDT---------------MHIEKHRPHHPSFFHKVESSASSDRILHENQ 618
Query: 609 --SREFLTEGGKTNL---LPSYLSI-GVLQEIGKRCSSK-VEFRSVVSTSKD-------L 654
S+E L + L LP Y S G +G+ S++ ++F S L
Sbjct: 619 RLSKEVLHRDDRLRLNHSLPGYHSFSGEEVPLGRSSSNRDLDFESGRGAPYAETPAVGLL 678
Query: 655 QFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSL 714
+ EV GEKIG G GKTR++AQ QAAE +L YL+ +Y + D ++
Sbjct: 679 RNCNEVWNQGEKIGEGTGKTRREAQCQAAEASLMYLSYRY----------LHGDVNRFPN 728
Query: 715 ENENGFLWDT 724
++N F+ DT
Sbjct: 729 ASDNNFMSDT 738
>gi|297803978|ref|XP_002869873.1| hypothetical protein ARALYDRAFT_492708 [Arabidopsis lyrata subsp.
lyrata]
gi|297315709|gb|EFH46132.1| hypothetical protein ARALYDRAFT_492708 [Arabidopsis lyrata subsp.
lyrata]
Length = 965
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 350/790 (44%), Positives = 471/790 (59%), Gaps = 109/790 (13%)
Query: 10 VYHGDVCLGEL-------------DTILVSDENFQFPNNE-----IRIRHISPSSERCIP 51
V+HGD +GE+ D ++ + Q E IRI H S S ERC P
Sbjct: 9 VFHGDGRIGEMEIYPPRELQQQQEDDVMKQRKKKQREVMEEAKMGIRINHFSQSGERCTP 68
Query: 52 LSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK 111
L++L TISS L KLE+S + Q L L++SC + KTAV+++G EE+HLVAM S+
Sbjct: 69 LAVLTTISSCGLCFKLEASPSLAQEPLSLLYSSCLMDNKTAVMLLGGEELHLVAMYSEHI 128
Query: 112 K--FPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIA 169
K PCFW +SV+ G+Y+SCL MLN+RCL IVFDLDETL+VANTM+SFED+I+ L+ I
Sbjct: 129 KNDRPCFWAFSVAPGVYDSCLVMLNIRCLGIVFDLDETLVVANTMRSFEDKIDGLQRRIN 188
Query: 170 REPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVR 229
E D R + M AE+KRY DD+ LLKQY E+D V++NG+V KVQ E VP S+NH+ +VR
Sbjct: 189 NEMDPQRLAVMVAEMKRYQDDKNLLKQYVESDQVVENGEVIKVQSEIVPALSDNHQPLVR 248
Query: 230 PVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYA 289
P+IR+ E+N++LTRINP RDTSVLVR+RP+WE+LRSYL AKGRKRFEVYVCTMAERDYA
Sbjct: 249 PLIRLQEKNIILTRINPMIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYA 308
Query: 290 LEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWED 349
LEMWRLLDPEG+LI + LL R+VCVKSG +KSL NVF G CHPKMA+VIDDR KVW++
Sbjct: 309 LEMWRLLDPEGNLINTNDLLARIVCVKSGLKKSLFNVFLDGTCHPKMALVIDDRLKVWDE 368
Query: 350 KDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFY 409
KDQPRVHVVPAF PYY+PQAE A A PVLCVARNVAC VRG FF++FD++LL I+E+ Y
Sbjct: 369 KDQPRVHVVPAFAPYYSPQAEAA-ATPVLCVARNVACGVRGGFFRDFDDSLLPRIAEISY 427
Query: 410 EDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQS---------- 459
E++ ++P+ PDVS+YL+SED NG+ + +G+ EVERRL ++
Sbjct: 428 ENDVEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADAEVERRLKEAISASSVVLPA 487
Query: 460 ---DEKYVVDSGLPSMKNSS--------DLKSETSLLPVAVA-----SNATVPATVVPSQ 503
D + P SS + +L P A+A ++ +VPS+
Sbjct: 488 VNIDPRIAAPVQYPMASTSSVSVPVPIPGPVVQQALQPSAMAFPSFQQPTSIAKHLVPSE 547
Query: 504 KPGLLGAPIRRDNSS---------------MKHGFDLRNQNSAQP----------PLPKL 538
P L +P R + ++HG D R+ ++P P P +
Sbjct: 548 -PSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPAPHV 606
Query: 539 HGQGGWI-VEEE-----VNRVLPNNRP-----VSIATGLPSHAS-----QAKGEEAIMAH 582
+ GW VEEE + R + P + + P H S + M H
Sbjct: 607 QSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRMLH 666
Query: 583 DLHKQ--------------NLPPASQP---PEIGVSQNHVSSNSREFLTEGGKTNLLPSY 625
+ +Q N P S P E +Q+ ++ +FL E ++ +
Sbjct: 667 ENRRQPKESLRRDEQLRPNNNLPGSHPFYGEEASWNQSSSRNSDLDFLPE---RSVSATE 723
Query: 626 LSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAEN 685
S VL I +C +KVE+R + S +L+FSVE + EKIG G+GK+R++A +AAE
Sbjct: 724 SSADVLHGIAIKCGTKVEYRPSLVASTNLRFSVEAWLSNEKIGEGIGKSRREALHKAAEA 783
Query: 686 ALHYLAEKYV 695
++ LA+ Y+
Sbjct: 784 SIQNLADVYI 793
>gi|218195257|gb|EEC77684.1| hypothetical protein OsI_16738 [Oryza sativa Indica Group]
Length = 905
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 355/753 (47%), Positives = 455/753 (60%), Gaps = 106/753 (14%)
Query: 76 PHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFWCYSVSSGLYNSCLGML 133
P L+ +HA+C + KTAV +G EEIHLVAM SK+ CFW Y V SGLYNSCL ML
Sbjct: 14 PPLVAMHAACLRDGKTAVFPLGAEEIHLVAMTSKRNLPNLACFWGYKVPSGLYNSCLSML 73
Query: 134 NLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDRTL 193
NLRCL IVFDLDETL+VANT +SFEDRI+AL+ ++ E D SGMSAE+KRY +D+++
Sbjct: 74 NLRCLGIVFDLDETLLVANTTRSFEDRIDALQRKLSNEIDPQHISGMSAEIKRYQEDKSI 133
Query: 194 LKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSV 253
LKQY END V+D GKV+KVQ E +PP +NH+ + RP+IR+ E+N++LTRINP RDTSV
Sbjct: 134 LKQYIENDQVIDGGKVYKVQTEVIPPLPDNHQPMTRPIIRLQEKNIILTRINPLIRDTSV 193
Query: 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
LVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLDP+ LI S QL DR+V
Sbjct: 194 LVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPDSRLINSVQLTDRLV 253
Query: 314 CVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
CVKSGSRKSLLNVF G CHP+MA+VIDDR KVW++KDQ RVHVVPAF+PYY+PQAE
Sbjct: 254 CVKSGSRKSLLNVFHDGSCHPEMALVIDDRLKVWDEKDQCRVHVVPAFSPYYSPQAEANF 313
Query: 374 AVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANF 433
+VPVLC ARNVACNVRG FFKEFDE LL ISE+ YEDE + P+APDV NYL++ED N
Sbjct: 314 SVPVLCFARNVACNVRGGFFKEFDEVLLPRISEIHYEDEINDFPSAPDVGNYLITEDENA 373
Query: 434 APNGSTNAPMS-EGLNGLEVERRLNQSDEKYVVDSGLPS----MKNSSDLKSETSLLPVA 488
A P++ +G+ EVERRL + + +P+ M + + + TS +P A
Sbjct: 374 AILNVNKDPLAFDGMADAEVERRLKEVSCSVQAVNPIPTNADVMPVAPNQQLITSSVPEA 433
Query: 489 ---------------------VASNATV-PATVVPSQKPG-----LLGAPIRRDNSSMKH 521
VA +A V P+ P+++ G L RR ++H
Sbjct: 434 PSLGMIPLNNDQGPQPPSSWPVAQSAPVDPSQSSPAREEGEVPESELDPDTRRRLLILQH 493
Query: 522 GFDLRNQNSAQPPLPK----------LHGQGGWI-VEEEVN-RVLPNNRPVSIATGL--- 566
G D R+ PP P + G W VE+E+N R L NR +TG
Sbjct: 494 GQDTRD---PAPPCPAGSPVQTSVLPVQSHGNWSHVEDEMNPRSL--NR---TSTGFHLE 545
Query: 567 ----------PSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNH------------ 604
P + E+ ++ D + + + P ++ S++H
Sbjct: 546 SDDINYDKKQPHNPPYFPDEDNLITSDRYNRRI--HRYPSQLPHSEDHHMLNRSSIAYRS 603
Query: 605 ----------VSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDL 654
SN R E G + + S GVL+EI C KVE++S + ++ +L
Sbjct: 604 FPGEDMGNRFGPSNHRSSKIEPGHQFVQNAETSAGVLEEIAVECGFKVEYQSTLCSTAEL 663
Query: 655 QFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSL 714
QFS+EV GEK+G G+GKTRK A++QA +L LAEK+ + D DK+ +
Sbjct: 664 QFSIEVRILGEKVGEGIGKTRKAAKRQAVNMSLRNLAEKF----------LTSDPDKMMI 713
Query: 715 ENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
ENGF S SN G R +++P AS
Sbjct: 714 LKENGF-----SSNSNSFRYSGGSRDDTSPVAS 741
>gi|222629251|gb|EEE61383.1| hypothetical protein OsJ_15551 [Oryza sativa Japonica Group]
Length = 927
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 355/753 (47%), Positives = 455/753 (60%), Gaps = 106/753 (14%)
Query: 76 PHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQK--KFPCFWCYSVSSGLYNSCLGML 133
P L+ +HA+C + KTAV +G EEIHLVAM SK+ CFW Y V SGLYNSCL ML
Sbjct: 14 PPLVAMHAACLRDGKTAVFPLGAEEIHLVAMTSKRNLPNLACFWGYKVPSGLYNSCLSML 73
Query: 134 NLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDRTL 193
NLRCL IVFDLDETL+VANT +SFEDRI+AL+ ++ E D SGMSAE+KRY +D+++
Sbjct: 74 NLRCLGIVFDLDETLLVANTTRSFEDRIDALQRKLSNEIDPQHISGMSAEIKRYQEDKSI 133
Query: 194 LKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSV 253
LKQY END V+D GKV+KVQ E +PP +NH+ + RP+IR+ E+N++LTRINP RDTSV
Sbjct: 134 LKQYIENDQVIDGGKVYKVQTEVIPPLPDNHQPMTRPIIRLQEKNIILTRINPLIRDTSV 193
Query: 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
LVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLDP+ LI S QL DR+V
Sbjct: 194 LVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPDSRLINSVQLTDRLV 253
Query: 314 CVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
CVKSGSRKSLLNVF G CHP+MA+VIDDR KVW++KDQ RVHVVPAF+PYY+PQAE
Sbjct: 254 CVKSGSRKSLLNVFHDGSCHPEMALVIDDRLKVWDEKDQCRVHVVPAFSPYYSPQAEANF 313
Query: 374 AVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANF 433
+VPVLC ARNVACNVRG FFKEFDE LL ISE+ YEDE + P+APDV NYL++ED N
Sbjct: 314 SVPVLCFARNVACNVRGGFFKEFDEVLLPRISEIHYEDEINDFPSAPDVGNYLITEDENA 373
Query: 434 APNGSTNAPMS-EGLNGLEVERRLNQSDEKYVVDSGLPS----MKNSSDLKSETSLLPVA 488
A P++ +G+ EVERRL + + +P+ M + + + TS +P A
Sbjct: 374 AILNVNKDPLAFDGMADAEVERRLKEVSCSVQAVNPIPTNADVMPVAPNQQLITSSVPEA 433
Query: 489 ---------------------VASNATV-PATVVPSQKPG-----LLGAPIRRDNSSMKH 521
VA +A V P+ P+++ G L RR ++H
Sbjct: 434 PSLGMIPLNNDQGPQPPSSWPVAQSAPVDPSQSSPAREEGEVPESELDPDTRRRLLILQH 493
Query: 522 GFDLRNQNSAQPPLPK----------LHGQGGWI-VEEEVN-RVLPNNRPVSIATGL--- 566
G D R+ PP P + G W VE+E+N R L NR +TG
Sbjct: 494 GQDTRD---PAPPCPAGSPVQTSVLPVQSHGNWSHVEDEMNPRSL--NR---TSTGFHLE 545
Query: 567 ----------PSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQNH------------ 604
P + E+ ++ D + + + P ++ S++H
Sbjct: 546 SDDINYDKKQPHNPPYFPDEDNLITSDRYNRRI--HRYPSQLPHSEDHHMLNRSSIAYRS 603
Query: 605 ----------VSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDL 654
SN R E G + + S GVL+EI C KVE++S + ++ +L
Sbjct: 604 FPGEDMGNRFGPSNHRSSKIEPGHQFVQNAETSAGVLEEIAVECGFKVEYQSTLCSTAEL 663
Query: 655 QFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSL 714
QFS+EV GEK+G G+GKTRK A++QA +L LAEK+ + D DK+ +
Sbjct: 664 QFSIEVRILGEKVGEGIGKTRKAAKRQAVNMSLRNLAEKF----------LTSDPDKMMI 713
Query: 715 ENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
ENGF S SN G R +++P AS
Sbjct: 714 LKENGF-----SSNSNSFRYSGGSRDDTSPVAS 741
>gi|224125260|ref|XP_002329761.1| predicted protein [Populus trichocarpa]
gi|222870823|gb|EEF07954.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/473 (61%), Positives = 355/473 (75%), Gaps = 22/473 (4%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQFPNNE------------IRIRHISPSSERCIPLS 53
YK++VY G+ LGE++ + + N IRI H S +SERC PL+
Sbjct: 1 YKSVVYKGEELLGEVEIYAQEQQQEEEENKNKRKRVIDEIVKGIRISHFSQASERCPPLA 60
Query: 54 ILHTISSFSLRCKLESSAPVEQPHLIN--------LHASCFYEFKTAVVVIGDEEIHLVA 105
+LHTI+S + K+E S + + LH+SC E KTAV+++G EE+HLVA
Sbjct: 61 VLHTITSIGVCFKMEESTASSSTKISSQQESPLRLLHSSCIQENKTAVMLLGGEELHLVA 120
Query: 106 MPSK--QKKFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEA 163
MPS+ ++K PCFW ++V+SGLY+SCL MLNLRCL IVFDLDETLIVANTM+SFED+IEA
Sbjct: 121 MPSRSNERKHPCFWGFNVASGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDKIEA 180
Query: 164 LRSWIAREPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSEN 223
L+ I+ E DQ R + +E+KRY DD+ +LKQY END V++NGKV K Q E VP S+N
Sbjct: 181 LQKKISTEVDQQRILAIISEIKRYQDDKIILKQYVENDQVIENGKVIKTQFEVVPAASDN 240
Query: 224 HERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTM 283
H+ +VRP+IR+PE+N++ TRINP+ RDTSVLVRLRPAWEDLRSYL A+GRKRFEVYVCTM
Sbjct: 241 HQPLVRPLIRLPEKNIIFTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTM 300
Query: 284 AERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDR 343
AERDYALEMWRLLDPE +LI S +LLDR+VCV SGSRKSL NVFQ G+CHPKMA+VIDDR
Sbjct: 301 AERDYALEMWRLLDPESNLINSNELLDRIVCVSSGSRKSLFNVFQDGICHPKMALVIDDR 360
Query: 344 CKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRS 403
VW++KDQ RVHVVPAF PYYAPQAE NAVP+LCVARNVACNVRG FFKEFDE LL+
Sbjct: 361 MNVWDEKDQSRVHVVPAFAPYYAPQAEANNAVPILCVARNVACNVRGGFFKEFDEGLLQK 420
Query: 404 ISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRL 456
I EV YED+ N+P+ PDVSNYL+SED A NG+ + P + EVERRL
Sbjct: 421 IPEVAYEDDTSNIPSPPDVSNYLVSEDDASAANGNRDPPSFDSTADAEVERRL 473
>gi|79481163|ref|NP_193898.3| RNA polymerase II C-terminal domain phosphatase-like 1 [Arabidopsis
thaliana]
gi|75111335|sp|Q5YDB6.1|CPL1_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like
1; Short=FCP-like 1; AltName: Full=Carboxyl-terminal
phosphatase-like 1; Short=AtCPL1; Short=CTD
phosphatase-like 1; AltName: Full=Protein FIERY 2;
AltName: Full=Protein JASMONATE OVEREXPRESSING 1
gi|49175305|gb|AAT52022.1| C-terminal domain phosphatase-like 1 [Arabidopsis thaliana]
gi|332659088|gb|AEE84488.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Arabidopsis
thaliana]
Length = 967
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 345/788 (43%), Positives = 458/788 (58%), Gaps = 103/788 (13%)
Query: 10 VYHGDVCLGELDTILVSDENFQ-----------------FPNNEIRIRHISPSSERCIPL 52
V+HGD LGEL+ + N Q IRI H S S ERC PL
Sbjct: 9 VFHGDGRLGELEIYPSRELNQQQDDVMKQRKKKQREVMELAKMGIRISHFSQSGERCPPL 68
Query: 53 SILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKK 112
+IL TISS L KLE+S Q L ++SC + KTAV+++G EE+HLVAM S+ K
Sbjct: 69 AILTTISSCGLCFKLEASPSPAQESLSLFYSSCLRDNKTAVMLLGGEELHLVAMYSENIK 128
Query: 113 --FPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170
PCFW +SV+ G+Y+SCL MLNLRCL IVFDLDETL+VANTM+SFED+I+ + I
Sbjct: 129 NDRPCFWAFSVAPGIYDSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDKIDGFQRRINN 188
Query: 171 EPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRP 230
E D R + + AE+KRY DD+ LLKQY E+D V++NG+V KVQ E VP S+NH+ +VRP
Sbjct: 189 EMDPQRLAVIVAEMKRYQDDKNLLKQYIESDQVVENGEVIKVQSEIVPALSDNHQPLVRP 248
Query: 231 VIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYAL 290
+IR+ E+N++LTRINP RDTSVLVR+RP+WE+LRSYL AKGRKRFEVYVCTMAERDYAL
Sbjct: 249 LIRLQEKNIILTRINPMIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYAL 308
Query: 291 EMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDK 350
EMWRLLDPEG+LI + LL R+VCVKSG +KSL NVF G CHPKMA+VIDDR KVW++K
Sbjct: 309 EMWRLLDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCHPKMALVIDDRLKVWDEK 368
Query: 351 DQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYE 410
DQPRVHVVPAF PYY+PQAE A A PVLCVARNVAC VRG FF++FD++LL I+E+ YE
Sbjct: 369 DQPRVHVVPAFAPYYSPQAEAA-ATPVLCVARNVACGVRGGFFRDFDDSLLPRIAEISYE 427
Query: 411 DEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQS----------- 459
++A ++P+ PDVS+YL+SED NG+ + +G+ EVERRL ++
Sbjct: 428 NDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVERRLKEAISASSAVLPAA 487
Query: 460 --DEKYVVDSGLPSMKNSSDLKSETSLLPVAVASNATVPATVVPSQKP------------ 505
D + P SS + + + +P Q+P
Sbjct: 488 NIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTSIAKHLVP 547
Query: 506 ---GLLGAPIRRDNSS---------------MKHGFDLRNQNSAQPPLPK---------- 537
L +P R + ++HG D R+ ++P P+
Sbjct: 548 SEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPPSH 607
Query: 538 LHGQGGWI-VEEE-----VNRVLPNNRP-----VSIATGLPSHASQAKGEEAIMAHD--L 584
+ + GW VEEE + R + P + + P H S + D L
Sbjct: 608 VQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRML 667
Query: 585 HKQNLPPA-SQPPEIGVSQNHVSSNSREFLTEGGKTN----------LLP------SYLS 627
H+ PP S + + N+ +S F E N LP + S
Sbjct: 668 HENRRPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPERSVSATETS 727
Query: 628 IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
VL I +C +KVE++ + +S DL+FSVE + +KIG G+GK+R++A +AAE ++
Sbjct: 728 ADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEASI 787
Query: 688 HYLAEKYV 695
LA+ Y+
Sbjct: 788 QNLADGYM 795
>gi|110738453|dbj|BAF01152.1| hypothetical protein [Arabidopsis thaliana]
Length = 967
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 344/788 (43%), Positives = 457/788 (57%), Gaps = 103/788 (13%)
Query: 10 VYHGDVCLGELDTILVSDENFQ-----------------FPNNEIRIRHISPSSERCIPL 52
V+HGD LGEL+ + N Q IRI H S S ERC PL
Sbjct: 9 VFHGDGRLGELEIYPSRELNQQQDDVMKQRKKKQREVMELAKMGIRISHFSQSGERCPPL 68
Query: 53 SILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKK 112
+IL TISS L KLE+S Q L ++SC + KTAV+++G EE+HLVAM S+ K
Sbjct: 69 AILTTISSCGLCFKLEASPSPAQESLSLFYSSCLRDNKTAVMLLGGEELHLVAMYSENIK 128
Query: 113 --FPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170
PCFW +SV+ G+Y+SCL MLNLRCL IVFDLDETL+VANTM+SFED+I+ + I
Sbjct: 129 NDRPCFWAFSVAPGIYDSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDKIDGFQRRINN 188
Query: 171 EPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRP 230
E D R + + AE+KRY DD+ LLKQY E+D V++NG+V KVQ E VP S+NH+ +VRP
Sbjct: 189 EMDPQRLAVIVAEMKRYQDDKNLLKQYIESDQVVENGEVIKVQSEIVPALSDNHQPLVRP 248
Query: 231 VIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYAL 290
+IR+ E+N++LTRINP RDTSVLVR+RP+WE+LRSYL AKGRKRFEVYVCTMAERDYAL
Sbjct: 249 LIRLQEKNIILTRINPMIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYAL 308
Query: 291 EMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDK 350
EMWRLLDPEG+LI + LL R+VCVKSG +KSL NVF G CHPKMA+VIDDR KVW++K
Sbjct: 309 EMWRLLDPEGNLINTNDLLARIVCVKSGFKKSLFNVFLDGTCHPKMALVIDDRLKVWDEK 368
Query: 351 DQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYE 410
DQPRVHVVPAF PYY+PQAE A A PVLCVARNVAC VRG FF++FD++LL I+E+ YE
Sbjct: 369 DQPRVHVVPAFAPYYSPQAEAA-ATPVLCVARNVACGVRGGFFRDFDDSLLPRIAEISYE 427
Query: 411 DEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQS----------- 459
++A ++P+ PDVS+YL+S D NG+ + +G+ EVERRL ++
Sbjct: 428 NDAEDIPSPPDVSHYLVSVDDTSGLNGNKDPLSFDGMADTEVERRLKEAISASSAVLPAA 487
Query: 460 --DEKYVVDSGLPSMKNSSDLKSETSLLPVAVASNATVPATVVPSQKP------------ 505
D + P SS + + + +P Q+P
Sbjct: 488 NIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSIPFQQPQQPTSIAKHLVP 547
Query: 506 ---GLLGAPIRRDNSS---------------MKHGFDLRNQNSAQPPLPK---------- 537
L +P R + ++HG D R+ ++P P+
Sbjct: 548 SEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEPSFPQRPPVQAPPSH 607
Query: 538 LHGQGGWI-VEEE-----VNRVLPNNRP-----VSIATGLPSHASQAKGEEAIMAHD--L 584
+ + GW VEEE + R + P + + P H S + D L
Sbjct: 608 VQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSFFSKIDNSTQSDRML 667
Query: 585 HKQNLPPA-SQPPEIGVSQNHVSSNSREFLTEGGKTN----------LLP------SYLS 627
H+ PP S + + N+ +S F E N LP + S
Sbjct: 668 HENRRPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQSSSRNSDLDFLPERSVSATETS 727
Query: 628 IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
VL I +C +KVE++ + +S DL+FSVE + +KIG G+GK+R++A +AAE ++
Sbjct: 728 ADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEASI 787
Query: 688 HYLAEKYV 695
LA+ Y+
Sbjct: 788 QNLADGYM 795
>gi|4455275|emb|CAB36811.1| putative protein [Arabidopsis thaliana]
gi|7268964|emb|CAB81274.1| putative protein [Arabidopsis thaliana]
Length = 995
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 345/802 (43%), Positives = 458/802 (57%), Gaps = 117/802 (14%)
Query: 10 VYHGDVCLGELDTILVSDENFQ-----------------FPNNEIRIRHISPSSERCIPL 52
V+HGD LGEL+ + N Q IRI H S S ERC PL
Sbjct: 9 VFHGDGRLGELEIYPSRELNQQQDDVMKQRKKKQREVMELAKMGIRISHFSQSGERCPPL 68
Query: 53 SILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKK 112
+IL TISS L KLE+S Q L ++SC + KTAV+++G EE+HLVAM S+ K
Sbjct: 69 AILTTISSCGLCFKLEASPSPAQESLSLFYSSCLRDNKTAVMLLGGEELHLVAMYSENIK 128
Query: 113 --FPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170
PCFW +SV+ G+Y+SCL MLNLRCL IVFDLDETL+VANTM+SFED+I+ + I
Sbjct: 129 NDRPCFWAFSVAPGIYDSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDKIDGFQRRINN 188
Query: 171 EPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRP 230
E D R + + AE+KRY DD+ LLKQY E+D V++NG+V KVQ E VP S+NH+ +VRP
Sbjct: 189 EMDPQRLAVIVAEMKRYQDDKNLLKQYIESDQVVENGEVIKVQSEIVPALSDNHQPLVRP 248
Query: 231 VIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYAL 290
+IR+ E+N++LTRINP RDTSVLVR+RP+WE+LRSYL AKGRKRFEVYVCTMAERDYAL
Sbjct: 249 LIRLQEKNIILTRINPMIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYAL 308
Query: 291 EMWRLLDPEGHLIGSKQLLDRVVCVKSG--------------SRKSLLNVFQRGLCHPKM 336
EMWRLLDPEG+LI + LL R+VCVKSG +KSL NVF G CHPKM
Sbjct: 309 EMWRLLDPEGNLINTNDLLARIVCVKSGILFGILYLLIFHHGFKKSLFNVFLDGTCHPKM 368
Query: 337 AMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEF 396
A+VIDDR KVW++KDQPRVHVVPAF PYY+PQAE A A PVLCVARNVAC VRG FF++F
Sbjct: 369 ALVIDDRLKVWDEKDQPRVHVVPAFAPYYSPQAEAA-ATPVLCVARNVACGVRGGFFRDF 427
Query: 397 DENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRL 456
D++LL I+E+ YE++A ++P+ PDVS+YL+SED NG+ + +G+ EVERRL
Sbjct: 428 DDSLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVERRL 487
Query: 457 NQS-------------DEKYVVDSGLPSMKNSSDLKSETSLLPVAVASNATVPATVVPSQ 503
++ D + P SS + + + +P Q
Sbjct: 488 KEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSIPFQ 547
Query: 504 KP---------------GLLGAPIRRDNSS---------------MKHGFDLRNQNSAQP 533
+P L +P R + ++HG D R+ ++P
Sbjct: 548 QPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPAPSEP 607
Query: 534 PLPK----------LHGQGGWI-VEEE-----VNRVLPNNRP-----VSIATGLPSHASQ 572
P+ + + GW VEEE + R + P + + P H S
Sbjct: 608 SFPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRPRHPSF 667
Query: 573 AKGEEAIMAHD--LHKQNLPPA-SQPPEIGVSQNHVSSNSREFLTEGGKTN--------- 620
+ D LH+ PP S + + N+ +S F E N
Sbjct: 668 FSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSNNNLPDSHPFYGEDASWNQSSSRNSDL 727
Query: 621 -LLP------SYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
LP + S VL I +C +KVE++ + +S DL+FSVE + +KIG G+GK
Sbjct: 728 DFLPERSVSATETSADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGK 787
Query: 674 TRKDAQQQAAENALHYLAEKYV 695
+R++A +AAE ++ LA+ Y+
Sbjct: 788 SRREALHKAAEASIQNLADGYM 809
>gi|115459562|ref|NP_001053381.1| Os04g0529500 [Oryza sativa Japonica Group]
gi|113564952|dbj|BAF15295.1| Os04g0529500, partial [Oryza sativa Japonica Group]
Length = 779
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 299/668 (44%), Positives = 391/668 (58%), Gaps = 104/668 (15%)
Query: 159 DRIEALRSWIAREPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVP 218
DRI+AL+ ++ E D SGMSAE+KRY +D+++LKQY END V+D GKV+KVQ E +P
Sbjct: 1 DRIDALQRKLSNEIDPQHISGMSAEIKRYQEDKSILKQYIENDQVIDGGKVYKVQTEVIP 60
Query: 219 PPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEV 278
P +NH+ + RP+IR+ E+N++LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEV
Sbjct: 61 PLPDNHQPMTRPIIRLQEKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEV 120
Query: 279 YVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAM 338
YVCTMAERDYALEMWRLLDP+ LI S QL DR+VCVKSGSRKSLLNVF G CHP+MA+
Sbjct: 121 YVCTMAERDYALEMWRLLDPDSRLINSVQLTDRLVCVKSGSRKSLLNVFHDGSCHPEMAL 180
Query: 339 VIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDE 398
VIDDR KVW++KDQ RVHVVPAF+PYY+PQAE +VPVLC ARNVACNVRG FFKEFDE
Sbjct: 181 VIDDRLKVWDEKDQCRVHVVPAFSPYYSPQAEANFSVPVLCFARNVACNVRGGFFKEFDE 240
Query: 399 NLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMS-EGLNGLEVERRLN 457
LL ISE+ YEDE + P+APDV NYL++ED N A P++ +G+ EVERRL
Sbjct: 241 VLLPRISEIHYEDEINDFPSAPDVGNYLITEDENAAILNVNKDPLAFDGMADAEVERRLK 300
Query: 458 QSDEKYVVDSGLPS----MKNSSDLKSETSLLPVA---------------------VASN 492
+ + +P+ M + + + TS +P A VA +
Sbjct: 301 EVSCSVQAVNPIPTNADVMPVAPNQQLITSSVPEAPSLGMIPLNNDQGPQPPSSWPVAQS 360
Query: 493 ATV-PATVVPSQKPG-----LLGAPIRRDNSSMKHGFDLRNQNSAQPPLPK--------- 537
A V P+ P+++ G L RR ++HG D R+ PP P
Sbjct: 361 APVDPSQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRD---PAPPCPAGSPVQTSVL 417
Query: 538 -LHGQGGWI-VEEEVN-RVLPNNRPVSIATGL-------------PSHASQAKGEEAIMA 581
+ G W VE+E+N R L NR +TG P + E+ ++
Sbjct: 418 PVQSHGNWSHVEDEMNPRSL--NR---TSTGFHLESDDINYDKKQPHNPPYFPDEDNLIT 472
Query: 582 HDLHKQNLPPASQPPEIGVSQNH----------------------VSSNSREFLTEGGKT 619
D + + + P ++ S++H SN R E G
Sbjct: 473 SDRYNRRI--HRYPSQLPHSEDHHMLNRSSIAYRSFPGEDMGNRFGPSNHRSSKIEPGHQ 530
Query: 620 NLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQ 679
+ + S GVL+EI C KVE++S + ++ +LQFS+EV GEK+G G+GKTRK A+
Sbjct: 531 FVQNAETSAGVLEEIAVECGFKVEYQSTLCSTAELQFSIEVRILGEKVGEGIGKTRKAAK 590
Query: 680 QQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLR 739
+QA +L LAEK++ D DK+ + ENGF S SN G R
Sbjct: 591 RQAVNMSLRNLAEKFLT----------SDPDKMMILKENGF-----SSNSNSFRYSGGSR 635
Query: 740 KESTPEAS 747
+++P AS
Sbjct: 636 DDTSPVAS 643
>gi|168010927|ref|XP_001758155.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690611|gb|EDQ76977.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 893
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 301/749 (40%), Positives = 433/749 (57%), Gaps = 79/749 (10%)
Query: 17 LGELDTILVSDENF--QFPNNEIRIRHISPSSERCIPLSILHTIS---SFSLRCKLESSA 71
LGE+ S +++ Q +++RI S SSERC+PL +LHTIS +F L A
Sbjct: 19 LGEMLLSPQSHDDYWSQVFGDQLRITSFSTSSERCMPLLVLHTISPGVAFKLAPSYSQQA 78
Query: 72 PVEQPHLINLHASCFYEFKTAVVVI-GDEEIHLVAMPSKQKKF------PCFWCYSVSSG 124
+ L LH SC +E KTA+ + G ++HLVAM QK+ CFW + V G
Sbjct: 79 -TDLSALQALHLSCLHENKTAIASLNGGFQLHLVAMLPSQKQILEGRKDACFWGFVVVEG 137
Query: 125 LYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAEL 184
+Y+SCL MLNLRCLA+V DLDETLIVANT+K+F+DRI+AL + D + ++A L
Sbjct: 138 MYDSCLVMLNLRCLAMVLDLDETLIVANTLKTFDDRIDALNRRLVNREDPV----LAASL 193
Query: 185 KRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRI 244
KR+ +D+ +L+QY + D V DNGK++K Q E VPP ++ ++RP++R+PERN++LTRI
Sbjct: 194 KRFQEDKAVLEQYIKTDQVFDNGKLYKAQSEVVPPVADGAIPLIRPIVRLPERNIILTRI 253
Query: 245 NPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIG 304
NP RDTSVLVRLRP+WE+L+ YL+AKGRKRFE ++CTM+ERDYALEMWRLLDP+ LI
Sbjct: 254 NPAVRDTSVLVRLRPSWEELKVYLLAKGRKRFEAFICTMSERDYALEMWRLLDPDARLIN 313
Query: 305 SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364
++L +RV CVKS ++K+L + F R CHPKMAMV+DDR VWE DQPRVH V AF PY
Sbjct: 314 PRELNERVTCVKSDAKKALKDCFPRHCCHPKMAMVLDDRLPVWEKTDQPRVHEVQAFMPY 373
Query: 365 YAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSN 424
P+ E+ +P LC+ARN+ACNVRG FFKE DE L + + EV ++ E +LP APDVSN
Sbjct: 374 TDPKGESMKELPPLCIARNIACNVRGYFFKELDETLTQQMLEVKFDTEVHSLPKAPDVSN 433
Query: 425 YLMSEDANFAPNGSTNA------PMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDL 478
Y++ E+ PN + N M+ G+ ++ ++ D + + + ++N +
Sbjct: 434 YIVPEE-ELLPNSTANGVRDFGDGMANAEVGMNLKTPVSLCDIIFTLLISVLFVRNMCCV 492
Query: 479 KS-ETSLLPVAVASNATVPATVVPSQKPG----------LLGAPIRRDNSS--------- 518
+ S+ ++ A N P T VP + G + G+P R +
Sbjct: 493 QHFSDSIAYLSSADNGLYP-TGVPRRHVGPVQTRLLEGAIQGSPGREEGEVPETDIDPDT 551
Query: 519 ------MKHGFDLRNQNSAQPP-----LPKLHGQGGWI-VEEEV-----NRVLPN----- 556
++HG D + P +P L GGW+ +EEE+ +R+ P
Sbjct: 552 RRRLLILQHGMDASKPPAPPAPLPTQIIPALPPGGGWLGIEEEMSPRRPSRISPELVVEP 611
Query: 557 NRPVSIATGLPSHASQAKGEEAIMAHDLHKQN-------LPPASQPPEIGVSQNHVSSN- 608
P +G P + E+ ++ +Q SQ + S ++N
Sbjct: 612 ESPSFDRSGPPGFENPYIREQQLIREAARRQRDQEEGFFGEARSQHDDSAFSDEDGAANI 671
Query: 609 -SREFLTEGGKT---NLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTG 664
+R L E KT P+ +I L EIG++ V++R+ + +S +VEV+F G
Sbjct: 672 STRVILREPFKTPRAGPFPAVNAISALHEIGQKVKRTVQYRTDIRSSTHSGVAVEVMFGG 731
Query: 665 EKIGVGMGKTRKDAQQQAAENALHYLAEK 693
EK+G G+G+TRK+A+ AAE+AL YLA K
Sbjct: 732 EKVGEGVGRTRKEAKYNAAESALLYLATK 760
>gi|215697502|dbj|BAG91496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706329|dbj|BAG93185.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 758
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 290/647 (44%), Positives = 378/647 (58%), Gaps = 104/647 (16%)
Query: 180 MSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNL 239
MSAE+KRY +D+++LKQY END V+D GKV+KVQ E +PP +NH+ + RP+IR+ E+N+
Sbjct: 1 MSAEIKRYQEDKSILKQYIENDQVIDGGKVYKVQTEVIPPLPDNHQPMTRPIIRLQEKNI 60
Query: 240 VLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299
+LTRINP RDTSVLVRLRPAWEDLRSYLIA+GRKRFEVYVCTMAERDYALEMWRLLDP+
Sbjct: 61 ILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPD 120
Query: 300 GHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
LI S QL DR+VCVKSGSRKSLLNVF G CHP+MA+VIDDR KVW++KDQ RVHVVP
Sbjct: 121 SRLINSVQLTDRLVCVKSGSRKSLLNVFHDGSCHPEMALVIDDRLKVWDEKDQCRVHVVP 180
Query: 360 AFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAA 419
AF+PYY+PQAE +VPVLC ARNVACNVRG FFKEFDE LL ISE+ YEDE + P+A
Sbjct: 181 AFSPYYSPQAEANFSVPVLCFARNVACNVRGGFFKEFDEVLLPRISEIHYEDEINDFPSA 240
Query: 420 PDVSNYLMSEDANFAPNGSTNAPMS-EGLNGLEVERRLNQSDEKYVVDSGLPS----MKN 474
PDV NYL++ED N A P++ +G+ EVERRL + + +P+ M
Sbjct: 241 PDVGNYLITEDENAAILNVNKDPLAFDGMADAEVERRLKEVSCSVQAVNPIPTNADVMPV 300
Query: 475 SSDLKSETSLLPVA---------------------VASNATV-PATVVPSQKPG-----L 507
+ + + TS +P A VA +A V P+ P+++ G
Sbjct: 301 APNQQLITSSVPEAPSLGMIPLNNDQGPQPPSSWPVAQSAPVDPSQSSPAREEGEVPESE 360
Query: 508 LGAPIRRDNSSMKHGFDLRNQNSAQPPLPK----------LHGQGGWI-VEEEVN-RVLP 555
L RR ++HG D R+ PP P + G W VE+E+N R L
Sbjct: 361 LDPDTRRRLLILQHGQDTRD---PAPPCPAGSPVQTSVLPVQSHGNWSHVEDEMNPRSL- 416
Query: 556 NNRPVSIATGL-------------PSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGVSQ 602
NR +TG P + E+ ++ D + + + P ++ S+
Sbjct: 417 -NR---TSTGFHLESDDINYDKKQPHNPPYFPDEDNLITSDRYNRRI--HRYPSQLPHSE 470
Query: 603 NH----------------------VSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSS 640
+H SN R E G + + S GVL+EI C
Sbjct: 471 DHHMLNRSSIAYRSFPGEDMGNRFGPSNHRSSKIEPGHQFVQNAETSAGVLEEIAVECGF 530
Query: 641 KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITP 700
KVE++S + ++ +LQFS+EV GEK+G G+GKTRK A++QA +L LAEK++
Sbjct: 531 KVEYQSTLCSTAELQFSIEVRILGEKVGEGIGKTRKAAKRQAVNMSLRNLAEKFLT---- 586
Query: 701 RSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRKESTPEAS 747
D DK+ + ENGF S SN G R +++P AS
Sbjct: 587 ------SDPDKMMILKENGF-----SSNSNSFRYSGGSRDDTSPVAS 622
>gi|302783689|ref|XP_002973617.1| hypothetical protein SELMODRAFT_173599 [Selaginella moellendorffii]
gi|300158655|gb|EFJ25277.1| hypothetical protein SELMODRAFT_173599 [Selaginella moellendorffii]
Length = 807
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/468 (49%), Positives = 313/468 (66%), Gaps = 16/468 (3%)
Query: 6 YKNIVYHGDVCLGELDTILVSDENFQ--FPNNEIRIRHISPSSERCIPLSILHTISSFSL 63
+ +++ D +GE+ ++++ F +R+ SP S+RC PL I+H+ISS +
Sbjct: 15 FTTFLFNKDDYIGEVRVRPGAEDHVSHMFSGKAMRVSDFSPPSDRCTPLLIMHSISSGGV 74
Query: 64 RCKLE-SSAPVEQPHLINLHASCFYEFKTAVVVI-GDEEIHLVAMPS-----------KQ 110
++ + L LH+SC +E KTA+V + E+HLVAM +
Sbjct: 75 LFTMDLPQQQQQPDGLTFLHSSCLHEAKTAMVQMEAGMELHLVAMTKGSDGDEEFSQLQH 134
Query: 111 KKFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170
+ PCFW + G Y SCL MLNLRCL +VFDLDETLIVANTM+SFEDR++AL +
Sbjct: 135 TQQPCFWGFLTGQGSYASCLTMLNLRCLGLVFDLDETLIVANTMRSFEDRMDALTRKMRL 194
Query: 171 EPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRP 230
E D R + ++ ELKRY +D ++LKQY ENDCV+DNGK+ K Q E VP S+ + RP
Sbjct: 195 ETDPERTAALAGELKRYQEDHSILKQYMENDCVLDNGKIIKAQTEMVPSSSDATPALERP 254
Query: 231 VIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYAL 290
+IR+ RN++LTRINP R TSVLVR+RPAWE+LRSYL AKGRKRFEV++CT+AE+DYAL
Sbjct: 255 IIRLDSRNIILTRINPLVRFTSVLVRIRPAWEELRSYLTAKGRKRFEVFICTLAEKDYAL 314
Query: 291 EMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDK 350
EMWRLLDP+ LI S ++ +RVVCVK+G KSL NVF++G CHP+++MVIDDR VW +
Sbjct: 315 EMWRLLDPDARLIPSIEVEERVVCVKAGGLKSLANVFRKGQCHPRLSMVIDDRSNVWTEV 374
Query: 351 DQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYE 410
DQPRVHVVP F PYYAPQAET ++PVLC+A+N++ VRG FFKEFDE L + + V ++
Sbjct: 375 DQPRVHVVPPFVPYYAPQAETTGSLPVLCIAKNISSTVRGNFFKEFDEVLSQQLGSVVFD 434
Query: 411 DEAVNLPAAPDVSNYLMSEDANFAPN-GSTNAPMSEGLNGLEVERRLN 457
+ LP DVS+YL ++D A + G + + +GL E E N
Sbjct: 435 TDTSTLPKPLDVSSYLRAQDTAVAVDAGGGSKDLPDGLADGETETIWN 482
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 627 SIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENA 686
SI +LQ + ++ ++++EFRS VS + +LQF VEV F GEKI G+G+T +DA+ +A+E+A
Sbjct: 589 SIILLQAMARKYNAQLEFRSSVSPTIELQFCVEVTFNGEKIARGVGRTSRDARSRASEDA 648
Query: 687 LHYLAEK-----YVAYI 698
L L+ + +VA++
Sbjct: 649 LRLLSNELRDTTFVAFL 665
>gi|168015884|ref|XP_001760480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688494|gb|EDQ74871.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 704
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 264/585 (45%), Positives = 356/585 (60%), Gaps = 50/585 (8%)
Query: 10 VYHGDVCLGELDTILVSDENF--QFPNNEIRIRHISPSSERCIPLSILHTIS---SFSLR 64
+YH + LGE+ S ++F Q NE+RI S SSERC+PL +LHTIS +F L
Sbjct: 28 LYHKNERLGEMVLSPQSLDDFWSQVFGNELRISSFSTSSERCLPLLVLHTISPGVAFKL- 86
Query: 65 CKLESSAPVEQPHLINLHASCFYEFKTAVVVI-GDEEIHLVAMPSKQKKFP------CFW 117
++ ++ L LH SC +E KTAV I G ++HLVAM Q + P CFW
Sbjct: 87 APSDNQQAMDLSALQALHVSCLHENKTAVAPISGGLQLHLVAMLPSQIQIPEGRKDACFW 146
Query: 118 CYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRA 177
+ V G+Y+SCL MLNLRCLA+V DLDETLIVANT+K+F+DRI+AL + D +
Sbjct: 147 GFVVVQGMYDSCLAMLNLRCLAMVLDLDETLIVANTLKTFDDRIDALNRRLVNREDPV-- 204
Query: 178 SGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPER 237
++ LKR+ +D+ +L+QY + D V DNGK++K Q E VPP ++ ++RP++R+PER
Sbjct: 205 --LAGTLKRFQEDKAILEQYIKTDQVYDNGKLYKAQSEVVPPVADGAIPLIRPIVRLPER 262
Query: 238 NLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLD 297
N++LTRINP RDTSVLVRLRP W++L+ YL+AKGRKRFE ++CTM+ERDYALEMWRLLD
Sbjct: 263 NVILTRINPAVRDTSVLVRLRPNWDELKVYLLAKGRKRFEAFICTMSERDYALEMWRLLD 322
Query: 298 PEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHV 357
P+ LI ++L +RV CVKS ++K+L + F R CHPKMAMVIDDR VWE DQPRVH
Sbjct: 323 PDARLINPRELNERVTCVKSDAKKALKDCFPRHCCHPKMAMVIDDRLPVWEKVDQPRVHE 382
Query: 358 VPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLP 417
V AF PY P+ ET +P LC+ARN+ACNVRG FFKE DE L + + EV ++ E LP
Sbjct: 383 VQAFMPYTDPKGETMKELPPLCIARNIACNVRGYFFKELDETLTQQMLEVKFDTEVHTLP 442
Query: 418 AAPDVSNYLMSEDANFAPNGSTNA--PMSEGLNGLEVERRLNQSDEKYVVDSG-----LP 470
APDVS+Y++ E+ + P +TN S+G+ +EVE L + +G P
Sbjct: 443 KAPDVSSYIIPEE-DVVPGFTTNGVKDFSDGMANMEVEMNLKTPVHMCDIFAGDVSKVDP 501
Query: 471 SMKNSSD-----LKSETSLLPVAVASNATVPATV---------VPSQKPGL-----LGAP 511
SM D +E SL P + T P P ++ G +
Sbjct: 502 SMYLPGDSIVYPSSTENSLYPPGIPRRHTDPVQTRLLEGTIQGSPGREEGEVPEADIDPD 561
Query: 512 IRRDNSSMKHGFDLRNQNSAQPPL-----PKLHGQGGWI-VEEEV 550
RR ++HG D + PL P + GGW+ +EEE+
Sbjct: 562 TRRRLLILQHGMDASKPVTPLAPLQVQIPPVVPPGGGWLGIEEEM 606
>gi|302787741|ref|XP_002975640.1| hypothetical protein SELMODRAFT_32861 [Selaginella moellendorffii]
gi|300156641|gb|EFJ23269.1| hypothetical protein SELMODRAFT_32861 [Selaginella moellendorffii]
Length = 436
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/409 (54%), Positives = 287/409 (70%), Gaps = 13/409 (3%)
Query: 32 FPNNEIRIRHISPSSERCIPLSILHTISSFSLRCKLE-SSAPVEQPHLINLHASCFYEFK 90
F +R+ SP S+RC PL I+H+ISS + ++ + L LH+SC +E K
Sbjct: 28 FSGKAMRVSDFSPPSDRCTPLLIMHSISSGGVLFTMDLPQQQQQPDGLTFLHSSCLHEAK 87
Query: 91 TAVVVI-GDEEIHLVAMPSK-----------QKKFPCFWCYSVSSGLYNSCLGMLNLRCL 138
TA+V + E+HLVAM + + PCFW + G Y SCL MLNLRCL
Sbjct: 88 TAMVQMEAGMELHLVAMTKRSDGDEEFSQLQHTQQPCFWGFLTGQGSYASCLTMLNLRCL 147
Query: 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDRTLLKQYT 198
+VFDLDETLIVANTM+SFEDR++AL + E D RA+ ++ ELKRY +D ++LKQY
Sbjct: 148 GLVFDLDETLIVANTMRSFEDRMDALTRKMRLETDPERAAALAGELKRYQEDHSILKQYM 207
Query: 199 ENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLR 258
ENDCV+DNGK+ K Q E VP S+ + RP+IR+ RN++LTRINP R TSVLVR+R
Sbjct: 208 ENDCVLDNGKIIKAQTEMVPSSSDATPALERPIIRLDSRNIILTRINPLVRFTSVLVRIR 267
Query: 259 PAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSG 318
PAWE+LRSYL AKGRKRFEV++CT+AE+DYALEMWRLLDP+ LI S ++ +RVVCVK+G
Sbjct: 268 PAWEELRSYLTAKGRKRFEVFICTLAEKDYALEMWRLLDPDARLIPSIEVEERVVCVKAG 327
Query: 319 SRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVL 378
KSL NVF++G CHP+++MVIDDR VW + DQPRVHVVP F PYYAPQAE + +PVL
Sbjct: 328 GLKSLANVFRKGQCHPRLSMVIDDRSNVWTEVDQPRVHVVPPFVPYYAPQAEVGSLLPVL 387
Query: 379 CVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLM 427
C+A+N++ VRG FFKEFDE L + + V ++ + LP DVS+YL+
Sbjct: 388 CIAKNISSTVRGNFFKEFDEVLSQQLGSVVFDTDTSTLPKPLDVSSYLV 436
>gi|147794041|emb|CAN60109.1| hypothetical protein VITISV_044329 [Vitis vinifera]
Length = 858
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 146/259 (56%), Gaps = 56/259 (21%)
Query: 457 NQSDEKYVVDSGLPSMKNSSDLKSETSLLPVAVASNATVPAT---VVPSQKPGLLGAPIR 513
N DEK++VDS + NS + +SET P N P + ++PSQKP LLGAPI+
Sbjct: 12 NFQDEKHIVDSAASPIANSYEFRSETLQPPALTVQNVVGPTSSRLLMPSQKPSLLGAPIK 71
Query: 514 RDNSS-------------MKHGFDLRNQNSAQPP----LPK-----LHGQGGWIVEEEVN 551
RD SS MKHG D+RNQ+ PP LP+ LH QG W+VE++ N
Sbjct: 72 RDFSSFESDADMKRRLLIMKHGQDVRNQSLGDPPILSRLPQISTSSLHPQGVWLVEDDSN 131
Query: 552 RVLPNNR---------------------------PVSIATGLPSHASQAKGEEAIMAHDL 584
R NNR P S L H Q K +E A++
Sbjct: 132 RGHLNNRASGLVQEADVLKPDKQRGHQIPFGHNTPGSTPVSLLPHLPQLKNDEVSAANEW 191
Query: 585 HKQNLPPASQP---PEIGVSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSK 641
K+NLPPASQP PE+GVSQN S+ RE TE GK N++P +LSIGVLQEIG+RCSSK
Sbjct: 192 QKKNLPPASQPSVFPEVGVSQNQASTTGRE-QTEAGKVNMMPPHLSIGVLQEIGRRCSSK 250
Query: 642 VEFRSVVSTSKDLQFSVEV 660
VEFRSVVSTSKDLQFSVEV
Sbjct: 251 VEFRSVVSTSKDLQFSVEV 269
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 107/162 (66%), Gaps = 16/162 (9%)
Query: 634 IGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE- 692
+G V+F V K L S +VLFTGEKIGVGMGKTRKDAQQQAAENALH LAE
Sbjct: 650 LGSLLGKGVDFELV--PKKRLVVSQQVLFTGEKIGVGMGKTRKDAQQQAAENALHSLAEH 707
Query: 693 ------------KYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRK 740
KYVAY TP SGA+D+DFDKLSL NENGFLWDT + S+E L EDG K
Sbjct: 708 DNKVLMYFLWPDKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGSSELLMEDGFPK 767
Query: 741 ESTPEASEVEPGSTYASLGNQQVQKRPNVPKLSKLIPSKRLK 782
ES EA E+ G+T +S+ NQQVQKR N P + LI S LK
Sbjct: 768 ESISEAGEMAHGTTSSSVVNQQVQKRANSPSMY-LILSMLLK 808
>gi|302854164|ref|XP_002958592.1| hypothetical protein VOLCADRAFT_99895 [Volvox carteri f.
nagariensis]
gi|300256053|gb|EFJ40329.1| hypothetical protein VOLCADRAFT_99895 [Volvox carteri f.
nagariensis]
Length = 2198
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 184/379 (48%), Gaps = 56/379 (14%)
Query: 82 HASCFYEFKTAVVVIGDEEIHLVA----MPSKQKKFPCFWCYSVSSGLYNSCLGMLNLRC 137
H C + K VV I + L+A + K P FW Y + G+ ++ ML+
Sbjct: 52 HQHCLEDRKAIVVKINETRELLLAPVFSIEDDGTKCPVFWGYLLYFGVASAVSLMLDNSR 111
Query: 138 LAIVFDLDETLIVANTMKSFEDRIEA-----------LRSWIAR-------EPDQIRASG 179
+A+V DLDETL+VAN+M + + +IE LR +++ E ++R +
Sbjct: 112 MAVVLDLDETLLVANSMSTLDSKIEVARKTRRLKAVELRELLSQGVTVDSEEAARLRGAE 171
Query: 180 MSA--ELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPER 237
SA E + D +L+Q+ V NG K + E E+ ++ RPVIR+ +
Sbjct: 172 SSAAREEELLASDLEMLRQFASTSTVTLNGVSHKAKMELAY--LEDGTQVKRPVIRLDKP 229
Query: 238 N-LVLTRINPENRDTSVLVRLRPAWEDLRSYLIA--------KGRKRFEVYVCTMAERDY 288
+ ++LTRI P+ R+TS+++R RP WE+LR+ L K + RF+VYVCT AER Y
Sbjct: 230 HPVILTRIRPDQRETSMILRPRPFWEELRAVLAGDTEVDQNGKPKLRFDVYVCTAAERQY 289
Query: 289 ALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLL-------NVFQRGLCHPK------ 335
ALE+WRLLD +I + R++ V G +K LL N L P+
Sbjct: 290 ALEVWRLLDTRASIIPTSDRSKRIINVPGGRKKQLLKSLGVADNAGNPRLEWPELQDDEP 349
Query: 336 ---MAMVIDDRCKVWEDKDQPRV-HVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGC 391
+A+V+DDR VWE Q + VVP + +Y +A + P R +
Sbjct: 350 PLPLAVVLDDRLDVWEAASQSCILQVVPWY--WYRDEAARLVSGPGTPAERLALASEN-- 405
Query: 392 FFKEFDENLLRSISEVFYE 410
K + +L+ +E+FY+
Sbjct: 406 EIKRMRDAVLQLRAELFYD 424
>gi|308801351|ref|XP_003077989.1| double-stranded RNA-binding domain (ISS) [Ostreococcus tauri]
gi|116056440|emb|CAL52729.1| double-stranded RNA-binding domain (ISS) [Ostreococcus tauri]
Length = 793
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 173/361 (47%), Gaps = 52/361 (14%)
Query: 51 PLSILHTISSFS-----LRCKLESSAPVEQPHLI-NLHASCFYEFKTAVV--VIGDE--E 100
PL+ LH +S S RC +S + I +LH E K+AV+ G E
Sbjct: 95 PLAALHFLSRRSAGAPAFRCSPKSGLNDDLKKAIEDLHEEMVRENKSAVMPPTSGGRMGE 154
Query: 101 IHLVAMPSKQK----------KFP--CFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETL 148
+HLVA+P + + P F + G+L L +V DLDETL
Sbjct: 155 LHLVAVPDAETVAAGDGDRGARNPKTMFVAFQTDEMAPAYAQGLLKHNRLVVVLDLDETL 214
Query: 149 IVANTMKSFEDRIEALRSWIA-------REP-------DQIRASGMSAE--LKRYMDDRT 192
+ A T+ + + RIE RS + P D+++ + E L+R DR
Sbjct: 215 VQATTLHALDRRIETARSKMLSLMKFDFNNPRLTTVMIDEVKKEKQACETALRRSQLDRQ 274
Query: 193 LLKQY-TENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERN-----LVLTRINP 246
+L Q+ TE ++N + + E+ P S +R+ R VIRIP + L T I+P
Sbjct: 275 MLMQFVTEGAVTVNNRRSVTI--PEIEPLSNGMQRL-RNVIRIPSPHTKGAMLAFTLIDP 331
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIA--KGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIG 304
+ T++LV +RP W +LRSYL +G KR E +VCTMA DYA EM RLLDP G +
Sbjct: 332 SSPATAMLVHIRPGWGELRSYLSGSDRGSKRAETFVCTMANIDYAREMCRLLDPHGTVFD 391
Query: 305 SKQLLDRVVCVKSGSRKSLLNVFQRGLCHP-KMAMVIDDRCKVWEDKDQPRVHVVPAFTP 363
QL R+ VK KSL + GL P ++A+++DDR VWE Q + V F P
Sbjct: 392 PAQLDKRIKSVKPDELKSLSDTC--GLHFPSELAVIVDDRTAVWEPSAQSHILAVTPFMP 449
Query: 364 Y 364
Y
Sbjct: 450 Y 450
>gi|145344679|ref|XP_001416855.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577081|gb|ABO95148.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 842
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 179/400 (44%), Gaps = 72/400 (18%)
Query: 28 ENFQFPNNEIRIRHISPSSERCIPLSILHTIS-----SFSLRCK-LESSAPVEQPHLINL 81
E + E+ I S + PL+ LH ++ + S RC + E+ + L
Sbjct: 58 EELRGAGGEMAIVGFWESRDAFDPLAALHFLARSSGGAPSFRCAPCATCEEEERRAIEEL 117
Query: 82 HASCFYEFKTAVVVIGDEE------IHLVAMP------------------------SKQK 111
HA E K+AVV + D E +HLVA+P S
Sbjct: 118 HAEMTRENKSAVVQMKDGEGRTSGELHLVAVPEATREGEEDGGEGTGDERRADGGASATT 177
Query: 112 KFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALR------ 165
+F F ++ +L L +VFDLDETL+ + T+ + RIEA R
Sbjct: 178 RFVAFKTDEMAPAYAQP---LLKHNRLVVVFDLDETLVQSTTLHMLDRRIEATRLKMVSL 234
Query: 166 -SWIAREP-------DQIRASGMSAE--LKRYMDDRTLLKQYTENDCVMDNGK--VFKVQ 213
+ P ++++ ++ E L+R DR +L QY V N + V +
Sbjct: 235 MKFDVTNPRVSTVMIEEVKQDKIACEQALRRLQTDRAMLYQYCSEGAVTHNNRRSVTIPE 294
Query: 214 QEEVPPPSENHERIVRPVIRIPERN-----LVLTRINPENRDTSVLVRLRPAWEDLRSYL 268
E +P N + +R +IRIP + LV T INP N T++LV +RP WE++R YL
Sbjct: 295 IESLP----NGMQRLRNIIRIPSPHIKGAMLVFTVINPANPATAMLVHVRPGWEEMRKYL 350
Query: 269 I-AKGR--KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLN 325
+ GR KR EV+VCT A +YA E+ R+LDP G + QL RV V KSL
Sbjct: 351 AGSDGRQSKRAEVFVCTKASNNYAREVCRILDPHGAVFEPAQLEHRVKSVGVDEMKSLRT 410
Query: 326 VFQRGLCHP-KMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364
G P ++ +++DDR VWE + Q + V F PY
Sbjct: 411 TC--GAHFPAELTVIVDDRTVVWEAEAQSHILAVTPFMPY 448
>gi|307111822|gb|EFN60056.1| hypothetical protein CHLNCDRAFT_49534 [Chlorella variabilis]
Length = 2207
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 179/411 (43%), Gaps = 65/411 (15%)
Query: 54 ILHTISSFSLRCKLESSA---PVEQPHLINLHASCFYEFKTAVVVIGDE---EIHLV--- 104
+ H +++ S+R P + + LH E +T V+ E+ LV
Sbjct: 994 VFHGVAARSIRKPDRYQGDGRPAWSVNWVQLHGLLTSENRTGVLRTAGRAGSEVMLVPLM 1053
Query: 105 -AMPSKQKKFPCFWCYSVS--SGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRI 161
A P F ++ S +G + L +L +R L +VFDLDETL+VA + +
Sbjct: 1054 AAAAGGGPPQPIFAGFAASLLAGDFVKEL-LLTMR-LPLVFDLDETLLVAKSQSQMAKEL 1111
Query: 162 EALRSWIAREPDQIRAS----------GMSAELKRYMDDRTLLKQYTENDCVMDNGKVFK 211
+ALR R P RA+ + E + +D LL+Q+ E D V G+
Sbjct: 1112 KALRD--VRRPHLHRATSDPQQALKLAALDREEQLMQEDLALLQQFAEGDAVTYQGQRLA 1169
Query: 212 VQQEEVPPPSENHERIVRPVIRIP-ERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIA 270
Q E ++ I RPVIR+P + +LTRI P N +S++ +LRP W + YL
Sbjct: 1170 AQVESAH--GDDMGLIRRPVIRLPGNEDTLLTRIEPGNPHSSMVFKLRPNWRAIWGYLGG 1227
Query: 271 ---------------KGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCV 315
+ RFE YVCT AER YALE WR+LDP+G ++ + R +
Sbjct: 1228 LMDPRTHQPVSSSPPSAKLRFETYVCTAAERGYALEAWRVLDPDGWMMPPAERQRR---L 1284
Query: 316 KSGSR-KSLLNVFQRGLCHPK-----------MAMVIDDRCKVWEDKDQPRVHVVPAFTP 363
SGS+ KSL V Q G P +A+++DDR ++W+ ++ +V V F P
Sbjct: 1285 HSGSKQKSLGAVLQLGRGPPPGPGGAPASPMPLAVIVDDRVEIWDATNRGQVLQVEPFRP 1344
Query: 364 YYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAV 414
+ A+ L +A G E L S F+ + V
Sbjct: 1345 WEEQAAQD------LGLADTPTTQSLGAQMIRLKEELFNLRSHAFHRVQEV 1389
>gi|159474642|ref|XP_001695434.1| double stranded RNA-binding protein [Chlamydomonas reinhardtii]
gi|158275917|gb|EDP01692.1| double stranded RNA-binding protein [Chlamydomonas reinhardtii]
Length = 1520
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 131/269 (48%), Gaps = 59/269 (21%)
Query: 190 DRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERN-LVLTRINPEN 248
D LL+Q+ + V NG V+K + E V E+ + RPVIR+ + ++LTRI PE
Sbjct: 49 DLELLRQFAASGSVTYNGTVYKAKGETVT--LEDGTVVKRPVIRLETPHPVLLTRIRPEA 106
Query: 249 RDTSVLVRLRPAWEDLRSYLIAK------GRK--RFEVYVCTMAERDYALEMWRLLDPEG 300
R+TS+++R RP WE+LR L GR RF+VYVCT AER YALE+WRLLD G
Sbjct: 107 RETSMILRPRPYWEELRGVLAGDSELGPDGRPKLRFDVYVCTAAERQYALEVWRLLDTRG 166
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLN------VFQRGLC--------HPK----------- 335
+I +Q R++ V G +K LL V Q GL P+
Sbjct: 167 TIIPPEQRRGRIINVSGGRKKQLLKYEASHRVLQ-GLSLGVAELAGSPRLEFPELMDDLP 225
Query: 336 ---MAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAV-----PV--LCVA---- 381
+A+V+DDR VWE Q V V P+Y + E A V P L +A
Sbjct: 226 PVPLAVVLDDRLDVWEAASQSCVLQV---VPWYWYRDEAARLVSGPNTPADRLALASENE 282
Query: 382 ----RNVACNVRGCFFKEFDENLLRSISE 406
R+ +R F + +E LR I+E
Sbjct: 283 IKRMRDAIMTLRAELFYDINER-LRHIAE 310
>gi|255074465|ref|XP_002500907.1| predicted protein [Micromonas sp. RCC299]
gi|226516170|gb|ACO62165.1| predicted protein [Micromonas sp. RCC299]
Length = 1262
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 39/208 (18%)
Query: 227 IVRPVIRIPERN-----LVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKG--------- 272
+ RPVIR+ + +V TRI+P+N DTS++V +RP W DL +YL +
Sbjct: 419 VARPVIRVKSPHVRGGEMVFTRIDPKNVDTSMIVHVRPGWNDLYAYLTGEASQAQAPNAV 478
Query: 273 -------------RKRFEVYVCTMAERDYALEMWRLLDPEGHLI---GSKQLLDRVVCVK 316
R + + +VCTM+ER YA EMWRLLDP G L+ L R+VCV+
Sbjct: 479 RGVNKENPAHRPRRPKCKAFVCTMSERQYAHEMWRLLDPRGALLPLNDVHALHKRIVCVE 538
Query: 317 --SGSRKSLLNVFQRGLCH-PKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAP-----Q 368
G +KSL + RG H P++++++DDR VWE + Q + + F PY Q
Sbjct: 539 HGRGEKKSLAHA-TRGATHVPELSVIVDDRTNVWERRAQKNILAIAPFMPYNTDTGPGLQ 597
Query: 369 AETANAVPVLCVARNVACNVRGCFFKEF 396
+E A V+ + +++ VR F +++
Sbjct: 598 SEVAGKGGVMGMVQSMLNEVRFKFSQQW 625
>gi|303273976|ref|XP_003056313.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462397|gb|EEH59689.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 798
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 183 ELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPE-----R 237
+ R + DR +L + D V+ +GK + E + + + + I RPVIR+
Sbjct: 320 DFDRALHDREMLMMFASQDAVVLDGKRYPANHETIT--TSDGKEITRPVIRVKSPHCRGG 377
Query: 238 NLVLTRINPENRDTSVLVRLRPAWED--LRSYLIA-----------------------KG 272
++ TRI+P N +TS++V +RP W D L +L+
Sbjct: 378 HMFFTRIDPMNVETSMIVHVRPGWTDGGLLDFLVGVRAGALDGVGVAERPPPEEGCPPPR 437
Query: 273 RKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLC 332
R +VCT E+ YA EMWRLLDP G LI +K+ R+V V + K+L F G
Sbjct: 438 TPRCHAFVCTKGEKTYAEEMWRLLDPSGALIPAKKTSRRIVSVPTDETKTLSRAFG-GTP 496
Query: 333 HPK-MAMVIDDRCKVWEDKDQPRVHVVPAFTPYY 365
PK + +V+DDR VWE+ + + V F PY+
Sbjct: 497 MPKELTVVLDDRTGVWENDARGNILAVCPFMPYH 530
>gi|412986027|emb|CCO17227.1| unnamed protein product [Bathycoccus prasinos]
Length = 1015
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 55/287 (19%)
Query: 138 LAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIR-----ASGMS--------AEL 184
++ DLDETL+ A + + E IE R + +I G++ EL
Sbjct: 237 FVVILDLDETLLQAASEGTLERAIENERRKMIELDGKIETLSKGGGGINNNIDENNRDEL 296
Query: 185 KRY--------------MDDRTLLKQYTENDCVMDNGKVFKVQQEE---VPPPSENHERI 227
+Y M+D +LK++ E + V G + + E+ V + N ++
Sbjct: 297 SKYRRERQETEQRRRFLMEDHRMLKEFREGNAVR-QGALLNAKNEKALVVDKLNPNELKM 355
Query: 228 V-RPVIRIPERN-------LVLTRINPENRDTSVLVRLRPAW-------EDLRSYLIAKG 272
+ RPV+R+ + + TRI+P + ++S+LV +RP W E L A
Sbjct: 356 IERPVVRLASKYRGGLNGFTMFTRIDPNDPNSSILVHVRPGWFGPHGLKEALSGINRASK 415
Query: 273 RKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC---VKSGSRKSLLNVFQ- 328
++ EVYVCT AE++YA+EMWR+LD + LI + + RVV + G+RKS ++
Sbjct: 416 KRLAEVYVCTTAEKEYAMEMWRILDGDFSLIDERDVRRRVVSLYGLGGGARKSFKMAWEG 475
Query: 329 --RGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTP--YYAPQAET 371
+ H ++++IDDR VW + +QP V V F P Y P++ +
Sbjct: 476 NAKKWPHA-LSLIIDDRSNVWAETEQPHVITVHPFLPNGYIEPESNS 521
>gi|147805841|emb|CAN62785.1| hypothetical protein VITISV_033491 [Vitis vinifera]
Length = 144
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 54/72 (75%)
Query: 682 AAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLREDGLRKE 741
AAENAL+ LA+ YVAYITP SGA D+DFDKLSL NENG LWDT + SN+ EDGL KE
Sbjct: 47 AAENALYVLADXYVAYITPHSGAGDKDFDKLSLSNENGSLWDTXSAGSNDLXTEDGLPKE 106
Query: 742 STPEASEVEPGS 753
+ EA ++ G+
Sbjct: 107 TISEAGKMAHGT 118
>gi|358346653|ref|XP_003637380.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
gi|355503315|gb|AES84518.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
Length = 188
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 48/61 (78%)
Query: 103 LVAMPSKQKKFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIE 162
LVA+ S PCFW + V GLYNS L MLNLRCL IVFDLDETL+VANTM+SFEDRI+
Sbjct: 42 LVALHSWNDDRPCFWGFIVPMGLYNSSLVMLNLRCLGIVFDLDETLVVANTMRSFEDRID 101
Query: 163 A 163
A
Sbjct: 102 A 102
>gi|293335783|ref|NP_001169831.1| uncharacterized protein LOC100383723 [Zea mays]
gi|224031877|gb|ACN35014.1| unknown [Zea mays]
Length = 310
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 604 HVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFT 663
HV S+ R E G+ + S G+L+ I +C SKVE++S + + +LQFS+EV
Sbjct: 45 HVPSSQRNNQIESGRHFAQYAGTSAGILEGIALKCGSKVEYKSALCDTAELQFSIEVWIV 104
Query: 664 GEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWD 723
GEK+G G+G+TR++AQ+QAAE +L LA KY++ D +KLS EN F +
Sbjct: 105 GEKVGEGIGRTRREAQRQAAEMSLRNLANKYLS----------SDPNKLSDMKENDFSSN 154
Query: 724 TIISESNEGLREDGLRKESTPEAS 747
+ + R+D L ST E S
Sbjct: 155 RNVFGYSGNTRDDMLPLSSTSEES 178
>gi|259490370|ref|NP_001159196.1| uncharacterized protein LOC100304282 [Zea mays]
gi|223942573|gb|ACN25370.1| unknown [Zea mays]
gi|413937957|gb|AFW72508.1| hypothetical protein ZEAMMB73_487310 [Zea mays]
Length = 286
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 11/148 (7%)
Query: 600 VSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVE 659
++ HV S+ R + E G+ + S GVL+ I +C SKVE+RS + + +LQFS+E
Sbjct: 18 LATRHVPSSQRNHI-ESGRHFSQYAGTSAGVLEGIAVKCGSKVEYRSTLCDTAELQFSIE 76
Query: 660 VLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENG 719
V GEK G G+G+TR++AQ+QAAE +L LA KY++ D +KL+ ++
Sbjct: 77 VWIVGEKFGEGIGRTRREAQRQAAEMSLRNLANKYLS----------SDPNKLTDMKQDA 126
Query: 720 FLWDTIISESNEGLREDGLRKESTPEAS 747
F + I + R+D L ST E S
Sbjct: 127 FGSNRNIFGYSGNTRDDMLPLSSTSEES 154
>gi|413937958|gb|AFW72509.1| hypothetical protein ZEAMMB73_487310 [Zea mays]
Length = 258
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 11/148 (7%)
Query: 600 VSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVE 659
++ HV S+ R + E G+ + S GVL+ I +C SKVE+RS + + +LQFS+E
Sbjct: 18 LATRHVPSSQRNHI-ESGRHFSQYAGTSAGVLEGIAVKCGSKVEYRSTLCDTAELQFSIE 76
Query: 660 VLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENG 719
V GEK G G+G+TR++AQ+QAAE +L LA KY++ D +KL+ ++
Sbjct: 77 VWIVGEKFGEGIGRTRREAQRQAAEMSLRNLANKYLS----------SDPNKLTDMKQDA 126
Query: 720 FLWDTIISESNEGLREDGLRKESTPEAS 747
F + I + R+D L ST E S
Sbjct: 127 FGSNRNIFGYSGNTRDDMLPLSSTSEES 154
>gi|414879624|tpg|DAA56755.1| TPA: hypothetical protein ZEAMMB73_254643 [Zea mays]
Length = 125
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 10 VYHGDVCLGELDTILV---SDENFQFPNNEIRIRHISPSSERCIPLSILHTISSFSLRCK 66
++HG+ LGE++ + + FP NEIR+ H SP+SERC PL+IL TI+ FS+RCK
Sbjct: 36 MFHGESFLGEMEVFPMKRDGEGGLPFPTNEIRVSHFSPASERCPPLAILQTIAPFSVRCK 95
Query: 67 LESSAPVEQPHLINLHASCFYEFKTA 92
L++ P L L+ +CF EFK
Sbjct: 96 LQTKLTPPNPGLQRLYLTCFNEFKVC 121
>gi|224125268|ref|XP_002329763.1| predicted protein [Populus trichocarpa]
gi|222870825|gb|EEF07956.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 48/72 (66%)
Query: 637 RCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVA 696
+C +KVEFR + S DLQFS+E F GEK+G G GKTR++AQ+QAAE ++ LA Y+
Sbjct: 2 KCETKVEFRPALVASIDLQFSIEAWFAGEKVGEGTGKTRREAQRQAAEGSIKKLAGIYML 61
Query: 697 YITPRSGAMDRD 708
P SG M D
Sbjct: 62 RAKPDSGPMHGD 73
>gi|384250655|gb|EIE24134.1| hypothetical protein COCSUDRAFT_41430 [Coccomyxa subellipsoidea
C-169]
Length = 1029
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 132/351 (37%), Gaps = 103/351 (29%)
Query: 54 ILHTISSFSLRCKLESS--APVEQPHLINLHASCFYEFKTAVVVIGDE-EIHLVAMPS-- 108
+LH ++ S L S P L HA C E K AVV D+ ++ LVA +
Sbjct: 25 VLHVLTGGSCVALLPSPQLTPEGTKVLEEQHAQCLGENKAAVVAASDKLDLLLVAERALD 84
Query: 109 KQKKFPCFWCYSVSSGLYNSCLG--------MLNLRCLAIVFDLDETLIVANTMKSFEDR 160
+ P F Y V+ G + G + N+R L +V DLDETL+ A T
Sbjct: 85 GETPVPVFLGYVVARGTAETARGGAEAAAALIENMR-LPLVLDLDETLLEAFTANQLRKH 143
Query: 161 IEALRSWIAREPDQIRASGMSA--ELKRYM----DDRTLLKQYTENDCVMDNGKVFKVQQ 214
I+ L + I D S + +LKR +D LL Q+ + + V NG++ K
Sbjct: 144 IKDLSAEI----DGGNWSNVEKKLQLKREKAFKEEDYNLLVQFIQTNSVTLNGQIHK--- 196
Query: 215 EEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRK 274
AW GR+
Sbjct: 197 ---------------------------------------------AW---------PGRE 202
Query: 275 RFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCV--------KSGSRK----- 321
RFEVYVCT A+R YALE WR LDP LI R V K G+ K
Sbjct: 203 RFEVYVCTTADRSYALEAWRHLDPSALLIPYADRRKRFHNVHQDKDSKDKDGNVKPVKDL 262
Query: 322 ----SLLNVFQRGLCHP-----KMAMVIDDRCKVWEDKDQPRVHVVPAFTP 363
LL C P +A++IDD+ VW + Q +++ V F P
Sbjct: 263 AHVMGLLGHPWSAPCTPPNSAMPLAVIIDDQPAVWTAESQGQLYQVEKFNP 313
>gi|414590292|tpg|DAA40863.1| TPA: hypothetical protein ZEAMMB73_876368 [Zea mays]
Length = 342
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 395 EFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVER 454
EFDENLLR + E++YE+ ++L APDV +YL+ ED +F P AP+ EG+ G EVE+
Sbjct: 29 EFDENLLRKVFELYYENGLLDLSYAPDVGDYLVCEDTSFVPCNKDQAPIPEGMMGTEVEK 88
Query: 455 RLN-QSDEKYVV 465
RLN Q+ Y+V
Sbjct: 89 RLNGQTIAYYLV 100
>gi|414590291|tpg|DAA40862.1| TPA: hypothetical protein ZEAMMB73_876368 [Zea mays]
Length = 282
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 395 EFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVER 454
EFDENLLR + E++YE+ ++L APDV +YL+ ED +F P AP+ EG+ G EVE+
Sbjct: 29 EFDENLLRKVFELYYENGLLDLSYAPDVGDYLVCEDTSFVPCNKDQAPIPEGMMGTEVEK 88
Query: 455 RLN-QSDEKYVV 465
RLN Q+ Y+V
Sbjct: 89 RLNGQTIAYYLV 100
>gi|312283555|dbj|BAJ34643.1| unnamed protein product [Thellungiella halophila]
Length = 502
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 519 MKHGFDLRNQNSAQPPLPK----------LHGQGGWI-VEEEVNRVLPNNRPVS------ 561
++HG D R+ ++PP P+ + + GW VEEE+++ P R VS
Sbjct: 115 LQHGQDTRDPAPSEPPFPQRPPVQAPPPHVQPRNGWFPVEEEMDQA-PLRRTVSKEYPLD 173
Query: 562 -----IATGLPSHASQAKGEEAIMAHD--LHKQNLPPA-SQPPEIGVSQNHVSSNSREFL 613
+ P H S + D LH+ PP S + + N+ S F
Sbjct: 174 SEMIHMEKNRPRHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSNNNLPGSHSFF 233
Query: 614 TEGGKTNLLPSYLS----------------IGVLQEIGKRCSSKVEFRSVVSTSKDLQFS 657
E N S S VL +I +C +KVE++ + S DL+FS
Sbjct: 234 GEEASWNQSSSRNSDVDFISGRNVQAAENPAEVLHDIAVKCGTKVEYKPGLVASTDLRFS 293
Query: 658 VEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLEN 716
VE +GEKIG G+GK+R++A +AAE ++ LA+ Y++ + G RD S N
Sbjct: 294 VETWLSGEKIGEGIGKSRREALHKAAEVSIQNLADVYLSRVNGDPGPSHRDASPFSNGN 352
>gi|413949781|gb|AFW82430.1| hypothetical protein ZEAMMB73_140344 [Zea mays]
Length = 415
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 379 CVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPNGS 438
C ++RG EFDENLLR + E++YE+E ++L APDV +YL+ ED +F P
Sbjct: 7 CSGDKCDLDLRG----EFDENLLRKVFELYYENELLDLSYAPDVGDYLVCEDTSFVPGNK 62
Query: 439 TNAPMSEGLNGLEVERRLN-QSDEKYVV 465
AP EG+ EVE+RLN Q+ Y+V
Sbjct: 63 DQAP--EGMMETEVEKRLNGQTIAYYLV 88
>gi|449551315|gb|EMD42279.1| hypothetical protein CERSUDRAFT_148004 [Ceriporiopsis subvermispora
B]
Length = 875
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+L R L+++ DLD+T++ A + + I +W AR+ + + E + D
Sbjct: 154 LLKSRKLSLIVDLDQTIVHATVDPTVGEWITEGEAWEARQAKKSTETANGNEEESDDSDT 213
Query: 192 TLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDT 251
+ N + + K FK+ E + PPS R + + E+ + I P
Sbjct: 214 DSDDEVNPNWEALKDVKKFKLGPEFLGPPSMRGSR-AKGKEKAIEQEGCMYYIKP----- 267
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
RP W+D + K +E++V TM R YA E+ +DP+G + G + LL R
Sbjct: 268 ------RPGWQDFLQDMATK----YEMHVYTMGTRAYAEEVCATIDPDGKIFGGR-LLSR 316
Query: 312 VVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F C M ++IDDR VWE
Sbjct: 317 D---ESGSLTQKSLQRLFP---CDQSMVVIIDDRADVWE 349
>gi|390604450|gb|EIN13841.1| hypothetical protein PUNSTDRAFT_95201 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1229
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+L R L+++ DLD+T++ A + + I +W AR+ Q ASG D
Sbjct: 511 LLKSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWEARQA-QKAASGKEKGSDGSDSDS 569
Query: 192 TLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDT 251
+ N + + K F++ E + P + VI E+
Sbjct: 570 DEEDEVNPNWEALKDVKKFRLAPEILGTPRFKGPKSKTKVI--------------EDEGC 615
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
++ RP W + L +++E++V TM R YA E+ + +DPEG + G++ +L R
Sbjct: 616 LYYIKPRPGWHEFLHTL----SEKYEMHVYTMGTRAYAEEVCKAIDPEGQIFGNR-ILSR 670
Query: 312 VVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F C M ++IDDR VWE
Sbjct: 671 ---DESGSLTQKSLQRLFP---CDTSMVVIIDDRADVWE 703
>gi|336387157|gb|EGO28302.1| hypothetical protein SERLADRAFT_354339 [Serpula lacrymans var.
lacrymans S7.9]
Length = 874
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+LN R L+++ DLD+T++ A + + I +W + +++ S E + D
Sbjct: 155 LLNSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWEGKRAMKMKPPQRSKE-DEDVSDE 213
Query: 192 TLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDT 251
++++C + + V++ ++ P S R ++ + + EN
Sbjct: 214 VATDSESDDECNPNWEALKDVRKFQLGPESFGMPSSPRASRKVKGKQKFI-----ENEGC 268
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
++ RP W+ + + ++E++V TM R YA E+ +DP+G + G + +L R
Sbjct: 269 MYYIKPRPGWQ----HFLHSIANKYEMHVYTMGTRAYAEEVCAAIDPDGTIFGGR-ILSR 323
Query: 312 VVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F C M ++IDDR VWE
Sbjct: 324 ---DESGSLTQKSLQRLFP---CDTSMVVIIDDRADVWE 356
>gi|356537173|ref|XP_003537104.1| PREDICTED: uncharacterized protein LOC100817302 [Glycine max]
Length = 328
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 98 DEEIHLVAMPSKQKKFPCFWCYSVSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTM 154
D + H+ + ++Q++ F V G+Y++CL MLNLRCLAIVFDLDETLIVANTM
Sbjct: 117 DSDKHVSELNAEQEE--EFLVLVVLLGIYDACLAMLNLRCLAIVFDLDETLIVANTM 171
>gi|62321227|dbj|BAD94401.1| putative protein [Arabidopsis thaliana]
Length = 614
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%)
Query: 627 SIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENA 686
S VL I +C +KVE++ + +S DL+FSVE + +KIG G+GK+R++A +AAE +
Sbjct: 374 SADVLHGIAIKCGAKVEYKPSLVSSTDLRFSVEAWLSNQKIGEGIGKSRREALHKAAEAS 433
Query: 687 LHYLAEKYV 695
+ LA+ Y+
Sbjct: 434 IQNLADGYM 442
>gi|170084539|ref|XP_001873493.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651045|gb|EDR15285.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 845
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+L R L+++ DLD+T++ A + + I +W R Q + + +
Sbjct: 153 LLKSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWETR---QAKKAAHDPDDSDDSSSD 209
Query: 192 TLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDT 251
++ N + + K F++ E PPS + + ++ E + I P
Sbjct: 210 DNDEECNPNWEALRDVKKFRLGPESFVPPSLRGAQQGKGKQKLVENEGCMYYIKP----- 264
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
RP W++ + + ++E++V TM R YA ++ +DP+G L G + +L R
Sbjct: 265 ------RPGWKEF----LQEASTKYEMHVYTMGTRAYAEQVCAAIDPDGKLFGGR-VLSR 313
Query: 312 VVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F C M ++IDDR VWE
Sbjct: 314 D---ESGSLTQKSLQRLFP---CDTSMVVIIDDRADVWE 346
>gi|409051930|gb|EKM61406.1| hypothetical protein PHACADRAFT_204575 [Phanerochaete carnosa
HHB-10118-sp]
Length = 863
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+ R L+++ DLD+T++ A + + I +W AR+ + + +++ DD
Sbjct: 153 LRKTRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWEARQAEPKTSQPEGSDVTVVDDD- 211
Query: 192 TLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDT 251
+ N + + K F++ E + P +R + R + V EN
Sbjct: 212 ----EPNPNWEALKDVKKFRLGPEALGDPR------LRGIKRKGKDKSV------ENEGC 255
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
++ RP W + + K +E++V TM R YA E+ +DP+G + G + LL R
Sbjct: 256 MYYIKPRPGWNEFLEDMAEK----YEMHVYTMGTRAYAEEVCAAIDPDGKIFGGR-LLSR 310
Query: 312 VVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F C M +VIDDR VWE
Sbjct: 311 D---ESGSLTQKSLQRLFP---CDQSMVVVIDDRADVWE 343
>gi|392597598|gb|EIW86920.1| hypothetical protein CONPUDRAFT_95946 [Coniophora puteana
RWD-64-598 SS2]
Length = 830
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+L R L+++ DLD+T++ A + + I + W + + +A + ++ D
Sbjct: 155 LLKSRKLSLIVDLDQTIVHATVDPTVGEWINEGKQWEQKHIQKQKAR----DERKDGSDS 210
Query: 192 TLLKQYTENDC-----VMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINP 246
E+DC + + K F++ E P ++ +R + +I
Sbjct: 211 DGTASSDEDDCNPNWDALKDVKSFRLGPESFVMP-QSQKRGKQKLI-------------- 255
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
EN V+ RP W++ L K++E++V TM R YA E+ +DP+ + G +
Sbjct: 256 ENDGCLYYVKPRPGWKEFFQEL----SKKYEMHVYTMGTRAYAEEVCAAIDPDSKIFGGR 311
Query: 307 QLLDRVVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+L R +SGS +KSL +F C M ++IDDR VWE
Sbjct: 312 -ILSRD---ESGSLTQKSLQRLFP---CDTSMVVIIDDRADVWE 348
>gi|393218252|gb|EJD03740.1| hypothetical protein FOMMEDRAFT_105888 [Fomitiporia mediterranea
MF3/22]
Length = 921
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+L R L+++ DLD+T++ A + D I +W R + +AE ++
Sbjct: 155 LLKSRKLSLIVDLDQTIVHATVDPTVGDWITEGEAWEGRHARREAKRKQAAEGEKEDGSE 214
Query: 192 TLLKQYTENDC---VMDNGKVFK-VQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPE 247
++ V N + K V++ +PP + P R ++++ +
Sbjct: 215 DSEDSEEDDSDEDEVNPNWEALKDVKKFRLPP-----DNFCAPKSRWKDKHV---DKGIQ 266
Query: 248 NRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ 307
N V+ RP W++ S + + R+E++V TM R YA ++ +DP+G L G +
Sbjct: 267 NEGCLYYVKPRPGWKEFLSSVAS----RYEMHVYTMGTRAYAEKVCAAIDPDGRLFGGR- 321
Query: 308 LLDRVVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+L R +SGS +KSL +F C M ++IDDR VWE
Sbjct: 322 ILSR---DESGSLTQKSLRRLFP---CDTSMVVIIDDRADVWE 358
>gi|402220046|gb|EJU00119.1| hypothetical protein DACRYDRAFT_81791 [Dacryopinax sp. DJM-731 SS1]
Length = 855
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 55/238 (23%)
Query: 126 YNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELK 185
+ S + +L R L++V DLD+T+I A + + I+ R+W
Sbjct: 152 HESQIRLLGSRKLSLVVDLDQTIIQATVDPTVGEWIDQGRAW------------------ 193
Query: 186 RYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTR-- 243
+ R ++ + + D G+ F++ +E R +V R
Sbjct: 194 --EEGREGARKNPNWEALRDVGR-FRLSEE---------------------RKVVNGRGG 229
Query: 244 --INPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGH 301
I + DT+ ++ RP L ++L ++ + +E++V TM R YA ++ RL+DP G+
Sbjct: 230 KVIRSKREDTAYYIKPRPG---LHAFL-SRLSELYEMHVYTMGTRSYASQVVRLIDPLGN 285
Query: 302 LIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
L GS RV+ + N+ + C+ A++IDDR VW+ V VVP
Sbjct: 286 LFGS-----RVLSRDESGSLTFKNLTRLFPCNTSSAVIIDDRADVWDLSRANLVKVVP 338
>gi|299756470|ref|XP_002912206.1| RNA polymerase II subunit A domain phosphatase [Coprinopsis cinerea
okayama7#130]
gi|298411691|gb|EFI28712.1| RNA polymerase II subunit A domain phosphatase [Coprinopsis cinerea
okayama7#130]
Length = 801
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+L R L+++ DLD+T++ A + + I +W AR+ + + + +
Sbjct: 157 LLKSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWEARQERRNKVKTTTPDSDDSDSSD 216
Query: 192 TLLKQYTE----NDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPE 247
+ N + + K F + E PS + R+ E+ + I P
Sbjct: 217 DSDDDEDDECNPNWEALKDVKKFTLGPESFNAPSVKGRS--KGKHRMVEQEGCMYYIKP- 273
Query: 248 NRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ 307
RP W++ + K++E++V TM R YA E+ +DP+G L GS+
Sbjct: 274 ----------RPGWKEF----LENAAKKYEMHVYTMGTRAYAQEVCAAIDPDGKLFGSR- 318
Query: 308 LLDRVVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
LL R +SGS +KSL +F C M ++IDDR VWE
Sbjct: 319 LLSR---DESGSLTQKSLQRLFP---CDTSMVVIIDDRADVWE 355
>gi|414880587|tpg|DAA57718.1| TPA: hypothetical protein ZEAMMB73_282085 [Zea mays]
Length = 304
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 29/34 (85%)
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYV 280
E RDTS LVRLRP WEDLRSYLIA+GRK FEV V
Sbjct: 268 EIRDTSALVRLRPTWEDLRSYLIARGRKCFEVCV 301
>gi|414880588|tpg|DAA57719.1| TPA: hypothetical protein ZEAMMB73_282085 [Zea mays]
Length = 281
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 29/34 (85%)
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYV 280
E RDTS LVRLRP WEDLRSYLIA+GRK FEV V
Sbjct: 245 EIRDTSALVRLRPTWEDLRSYLIARGRKCFEVCV 278
>gi|409083591|gb|EKM83948.1| hypothetical protein AGABI1DRAFT_124274 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 853
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 23/219 (10%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDR 191
+L R L+++ DLD+T++ A + + I +W AR+ + + ++
Sbjct: 157 LLRSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWEARQTPKASTTPQPSDKSDDT--- 213
Query: 192 TLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDT 251
++C + + V++ + P E P R P+R+ ++ EN
Sbjct: 214 -NSDSDDNDECNPNWEALKDVKKFRLGP-----ESFSTPYARGPQRSKGKHKMV-ENEGC 266
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
++ RP W++ + K ++++V TM R YA E+ +DP+G + S+ +L R
Sbjct: 267 MYYIKPRPGWKEFLMDMATK----YDMHVYTMGTRAYAEEVCAAIDPDGSVFKSR-ILSR 321
Query: 312 VVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F C M ++IDDR VWE
Sbjct: 322 D---ESGSLTQKSLQRLFP---CDTSMVVIIDDRADVWE 354
>gi|363752479|ref|XP_003646456.1| hypothetical protein Ecym_4610 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890091|gb|AET39639.1| hypothetical protein Ecym_4610 [Eremothecium cymbalariae
DBVPG#7215]
Length = 751
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R V+LRP +D S + FE+++ TMA R YALE+ +++DP+G L G
Sbjct: 225 PPTRKCWYYVKLRPGLQDFFSNIAP----HFELHIYTMATRTYALEIAKIIDPDGTLFG- 279
Query: 306 KQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ S ++KSL +F M ++IDDR VW
Sbjct: 280 ----DRILSRDENGSLTQKSLERLFP---MDQSMVVIIDDRGDVW 317
>gi|302306421|ref|NP_982820.2| ABL127Wp [Ashbya gossypii ATCC 10895]
gi|299788508|gb|AAS50644.2| ABL127Wp [Ashbya gossypii ATCC 10895]
gi|374106022|gb|AEY94932.1| FABL127Wp [Ashbya gossypii FDAG1]
Length = 728
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R V+LRP ++ AK FE+++ TMA R YALE+ +++DP+G L G
Sbjct: 223 PPTRKCWYYVKLRPGLKEF----FAKIAPHFELHIYTMATRAYALEIAKIIDPDGKLFG- 277
Query: 306 KQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ S ++KSL +F M +VIDDR VW
Sbjct: 278 ----DRILSRDENGSLTQKSLERLFP---MDQSMVVVIDDRGDVW 315
>gi|452820283|gb|EME27327.1| phosphoprotein phosphatase [Galdieria sulphuraria]
Length = 734
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Query: 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
LV+LRP ++R +L K +R+E+++ TM R YA + LLDP G+L ++++ R
Sbjct: 290 LVKLRP---NVRRFL-EKIHQRYELHIYTMGSRSYADAIATLLDPSGNLF-QRRIVSRDD 344
Query: 314 CVKS-GSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQ 352
V+ +RKSL +F C M +++DDR VW D +Q
Sbjct: 345 FVEGMMNRKSLRRIFP---CDDSMVIIVDDREDVWMDHNQ 381
>gi|342320998|gb|EGU12936.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Rhodotorula
glutinis ATCC 204091]
Length = 817
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP D + + + +E++V TM R YA E+ +++DP+G L G + +L R
Sbjct: 252 IKMRPGLPDF----LKRVAEMYEMHVYTMGTRAYASEVCKVIDPDGGLFGGR-ILSRD-- 304
Query: 315 VKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
+SGS RKSL +F C M ++IDDR VW D V V+P
Sbjct: 305 -ESGSMTRKSLQRLFP---CDTNMVVIIDDRADVW-DGSPHLVKVIP 346
>gi|392570766|gb|EIW63938.1| hypothetical protein TRAVEDRAFT_111329 [Trametes versicolor
FP-101664 SS1]
Length = 900
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 33/223 (14%)
Query: 132 MLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMD-D 190
+ R L+++ DLD+T++ A + + I +W R+ + A E K D D
Sbjct: 153 LFGSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWETRQASKA-ARTEEGEKKDAADPD 211
Query: 191 RTLLKQYTE---NDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPE 247
+T+ E N + + K F++ E + P +R R ++ E+ + I P
Sbjct: 212 KTVSDTEDEVNPNWEALKDVKKFRLGPEALGQP----QRKGRGKEKLIEQEGCMYYIKP- 266
Query: 248 NRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ 307
RP + + K +E++V TM R YA E+ +DP G + G++
Sbjct: 267 ----------RPGLPEFLETMATK----YEMHVYTMGTRAYAEEVCAAIDPGGKIFGNR- 311
Query: 308 LLDRVVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+L R +SGS +KSL +F C M ++IDDR VWE
Sbjct: 312 ILSRD---ESGSLTQKSLQRLFP---CDQSMVVIIDDRADVWE 348
>gi|336374248|gb|EGO02585.1| hypothetical protein SERLA73DRAFT_102556 [Serpula lacrymans var.
lacrymans S7.3]
Length = 811
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
EN ++ RP W+ + + ++E++V TM R YA E+ +DP+G + G +
Sbjct: 214 ENEGCMYYIKPRPGWQ----HFLHSIANKYEMHVYTMGTRAYAEEVCAAIDPDGTIFGGR 269
Query: 307 QLLDRVVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+L R +SGS +KSL +F C M ++IDDR VWE
Sbjct: 270 -ILSRD---ESGSLTQKSLQRLFP---CDTSMVVIIDDRADVWE 306
>gi|302698337|ref|XP_003038847.1| hypothetical protein SCHCODRAFT_255670 [Schizophyllum commune H4-8]
gi|300112544|gb|EFJ03945.1| hypothetical protein SCHCODRAFT_255670 [Schizophyllum commune H4-8]
Length = 1207
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 131 GMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREP------DQIRASGMSAEL 184
+L R L ++ DLD+T++ A + + I ++W A+ A+ S E
Sbjct: 508 ALLKARRLKLIVDLDQTIVHATVDPTVGEWIAEGQAWEAKRARLEEKAAARAAAEESGED 567
Query: 185 KRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRI 244
D L++ N + + K F++ E + P + R++ L
Sbjct: 568 IDDSDPEEELEECNPNWDALKDVKKFRLGPELLAP------------TNMRGRHIAL--- 612
Query: 245 NPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIG 304
+ ++ RP W++ + + AK +E++V TM R YA+ + +LDP+G L G
Sbjct: 613 ---DEGCVYYIKPRPGWQEFMNNMSAK----YEMHVYTMGTRAYAMAVCNVLDPDGRLFG 665
Query: 305 SKQLLDRVVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ +L R +SGS +KSL +F M ++IDDR VW
Sbjct: 666 ER-ILSR---DESGSLTQKSLDRLFP---TDQSMVVIIDDRADVW 703
>gi|255712225|ref|XP_002552395.1| KLTH0C03894p [Lachancea thermotolerans]
gi|238933774|emb|CAR21957.1| KLTH0C03894p [Lachancea thermotolerans CBS 6340]
Length = 745
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R V+LRP ++ K FE+++ TMA R YALE+ +++DP+G L G
Sbjct: 223 PPPRKCQYYVKLRPGLQEF----FDKIAPHFELHIYTMATRAYALEIAKIIDPKGELFG- 277
Query: 306 KQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ S + KSL +F M ++IDDR VW
Sbjct: 278 ----DRILSRDENGSLTHKSLERLFP---MDQSMVVIIDDRGDVW 315
>gi|307104625|gb|EFN52878.1| hypothetical protein CHLNCDRAFT_58747 [Chlorella variabilis]
Length = 1148
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
VR+R W DLR +L A+ RF V+VC+ +R+Y +W +LDP G LI L R V
Sbjct: 638 VRIRRGWADLREFL-AQNADRFAVFVCSKGKREYIQLLWLMLDPLGQLIPESGRLQRRV 695
>gi|358057984|dbj|GAA96229.1| hypothetical protein E5Q_02893 [Mixia osmundae IAM 14324]
Length = 760
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 13/95 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP L+++L K +E++V TM R YA+ + R++DP+G S ++L R
Sbjct: 264 LKLRPG---LQAFL-RKMADLYEMHVYTMGTRSYAMAVCRIIDPDGTYF-STRILSR--- 315
Query: 315 VKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+SGS RKSL +F C MA++IDDR VW
Sbjct: 316 DESGSLTRKSLERLFP---CDTSMAVIIDDRSDVW 347
>gi|395334832|gb|EJF67208.1| hypothetical protein DICSQDRAFT_142769 [Dichomitus squalens
LYAD-421 SS1]
Length = 953
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 136 RCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPD--QIRASGMSAELKRYMDDRTL 193
R L+++ DLD+T++ A + + I +W AR+ ++ A+ E ++ D
Sbjct: 179 RKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWEARQTKKAEVAATAEKEEGEKEDDADAD 238
Query: 194 LKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSV 253
+ N + + K F++ E + P H+R + + E+ + E
Sbjct: 239 EDEVNPNWEALKDVKKFRLGPEALGQP---HQRGSKG--KGKEKTI-------EQDGCMY 286
Query: 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
++ RP D + K +E++V TM R YA E+ +DP G + G++ +L R
Sbjct: 287 YIKPRPGLLDFLQTMATK----YEMHVYTMGTRAYAEEVCAAIDPGGKIFGNR-ILSRD- 340
Query: 314 CVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F C M ++IDDR VWE
Sbjct: 341 --ESGSLTQKSLQRLFP---CDQSMVVIIDDRADVWE 372
>gi|254586061|ref|XP_002498598.1| ZYRO0G14168p [Zygosaccharomyces rouxii]
gi|238941492|emb|CAR29665.1| ZYRO0G14168p [Zygosaccharomyces rouxii]
Length = 764
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 34/143 (23%)
Query: 208 KVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSY 267
++F +++E + PP + P R+PER V++RP LR +
Sbjct: 203 QMFSLEEEPIVPP-----MYMGP--RLPERKCWY------------FVKVRPG---LREF 240
Query: 268 LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK---SGSRKSLL 324
A+ +E+++ TMA R YALE+ +++DP+G L G DR++ S ++KSL
Sbjct: 241 F-AQLAPLYEMHIYTMATRTYALEIAKIIDPDGSLFG-----DRILSRDENGSLTQKSLE 294
Query: 325 NVFQRGLCHPKMAMVIDDRCKVW 347
+F M +VIDDR VW
Sbjct: 295 RLFP---TDQSMVIVIDDRGDVW 314
>gi|444319376|ref|XP_004180345.1| hypothetical protein TBLA_0D03260 [Tetrapisispora blattae CBS 6284]
gi|387513387|emb|CCH60826.1| hypothetical protein TBLA_0D03260 [Tetrapisispora blattae CBS 6284]
Length = 768
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 13/95 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP ++ AK +E+++ TMA R YALE+ +++DP+G L GS+ +L R
Sbjct: 249 VKVRPGLKEF----FAKIAPLYEMHIYTMATRAYALEIAKIIDPDGSLFGSR-ILSR--- 300
Query: 315 VKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
++GS +KSL +F M ++IDDR VW
Sbjct: 301 DENGSLTQKSLERLFP---TDQSMVIIIDDRGDVW 332
>gi|68472089|ref|XP_719840.1| potential RNA Pol II CTD phosphatase component [Candida albicans
SC5314]
gi|68472324|ref|XP_719723.1| potential RNA Pol II CTD phosphatase component [Candida albicans
SC5314]
gi|46441553|gb|EAL00849.1| potential RNA Pol II CTD phosphatase component [Candida albicans
SC5314]
gi|46441679|gb|EAL00974.1| potential RNA Pol II CTD phosphatase component [Candida albicans
SC5314]
Length = 768
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 15/100 (15%)
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
+ V+LRP S + K +++E+++ TMA R+YAL + +++DP+G G DR
Sbjct: 229 TYYVKLRPGL----SEFLEKMAEKYEMHIYTMATRNYALSIAKIIDPDGKYFG-----DR 279
Query: 312 VVCV-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
++ +SGS K+L +F M ++IDDR VW+
Sbjct: 280 ILSRDESGSLTHKNLKRLFP---VDQSMVVIIDDRGDVWQ 316
>gi|241953831|ref|XP_002419637.1| RNA polymerase II subunit a c-terminal domain phosphatase, putative
[Candida dubliniensis CD36]
gi|223642977|emb|CAX43233.1| RNA polymerase II subunit a c-terminal domain phosphatase, putative
[Candida dubliniensis CD36]
Length = 771
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 15/100 (15%)
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
+ V+LRP S + K +++E+++ TMA R+YAL + +++DP+G G DR
Sbjct: 229 TYYVKLRPGL----SEFLEKMAEKYEMHIYTMATRNYALSIAKIIDPDGKYFG-----DR 279
Query: 312 VVCV-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
++ +SGS K+L +F M ++IDDR VW+
Sbjct: 280 ILSRDESGSLTHKNLKRLFP---VDQSMVVIIDDRGDVWQ 316
>gi|207342073|gb|EDZ69950.1| YMR277Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 544
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 225 ERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMA 284
E +V P++ + + +L P R V++RP L+ + AK FE+++ TMA
Sbjct: 31 EELVLPLMYMNDDGSMLRP--PPVRKCWYYVKVRPG---LKEFF-AKVAPLFEMHIYTMA 84
Query: 285 ERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVID 341
R YAL++ +++DP G L G DR++ S + KSL +F M +VID
Sbjct: 85 TRAYALQIAKIVDPTGELFG-----DRILSRDENGSLTTKSLAKLFP---TDQSMVVVID 136
Query: 342 DRCKVW 347
DR VW
Sbjct: 137 DRGDVW 142
>gi|296419837|ref|XP_002839498.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635659|emb|CAZ83689.1| unnamed protein product [Tuber melanosporum]
Length = 896
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 248 NRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ 307
R T V++RP ++ ++ + +E+++ TM R YA+ + +++DP+G + G +
Sbjct: 209 GRGTWYYVKMRPGLKEFLEHI----SQLYELHIYTMGTRAYAMSVKKIVDPDGRIFGER- 263
Query: 308 LLDRVVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKD 351
+L R +SGS +KSL +F KM ++IDDR VW+ D
Sbjct: 264 VLSR---DESGSMTQKSLHRIFP---VDTKMVVIIDDRGDVWKWSD 303
>gi|349580569|dbj|GAA25729.1| K7_Fcp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 732
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 225 ERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMA 284
E +V P++ + + +L P R V++RP ++ AK FE+++ TMA
Sbjct: 219 EELVLPLMYMNDDGSMLRP--PPVRKCWYYVKVRPGLKEF----FAKVAPLFEMHIYTMA 272
Query: 285 ERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVID 341
R YAL++ +++DP G L G DR++ S + KSL +F M +VID
Sbjct: 273 TRAYALQIAKIVDPTGELFG-----DRILSRDENGSLTTKSLTKLFP---TDQSMVVVID 324
Query: 342 DRCKVW 347
DR VW
Sbjct: 325 DRGDVW 330
>gi|255732778|ref|XP_002551312.1| hypothetical protein CTRG_05610 [Candida tropicalis MYA-3404]
gi|240131053|gb|EER30614.1| hypothetical protein CTRG_05610 [Candida tropicalis MYA-3404]
Length = 818
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
+ V+LRP S + + +++E+++ TMA R+YAL + +++DPEG G DR
Sbjct: 229 TYYVKLRPGL----SEFLERMSEKYEMHIYTMATRNYALAIAKIIDPEGKYFG-----DR 279
Query: 312 VVCV-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
++ +SGS K+L +F M +IDDR VW+
Sbjct: 280 ILSRDESGSLTHKNLKRLFP---VDQSMVAIIDDRGDVWQ 316
>gi|328713585|ref|XP_001947680.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Acyrthosiphon pisum]
Length = 736
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + S + + +E+++CT R+YA + +LDP+G L S ++L R C
Sbjct: 184 TRLRPGTYNFLSSI----SELYELHICTFGARNYAHTITHILDPKGKLF-SHRVLSRDEC 238
Query: 315 VKSGSRKSLLNVFQRGL--CHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETA 372
S+ L +GL C M +IDDR VW D +HV P ++
Sbjct: 239 FNPNSKTGNL----KGLFPCGDNMVCIIDDREDVW-DYALNLIHVKPY---HFFQHTGDI 290
Query: 373 NAVPVL 378
NA P L
Sbjct: 291 NAPPNL 296
>gi|6323933|ref|NP_014004.1| Fcp1p [Saccharomyces cerevisiae S288c]
gi|2497216|sp|Q03254.1|FCP1_YEAST RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase; AltName: Full=CTD phosphatase FCP1
gi|825543|emb|CAA89775.1| unknown [Saccharomyces cerevisiae]
gi|151945985|gb|EDN64217.1| protein phosphatase [Saccharomyces cerevisiae YJM789]
gi|256270710|gb|EEU05873.1| Fcp1p [Saccharomyces cerevisiae JAY291]
gi|259148865|emb|CAY82110.1| Fcp1p [Saccharomyces cerevisiae EC1118]
gi|285814283|tpg|DAA10178.1| TPA: Fcp1p [Saccharomyces cerevisiae S288c]
gi|323346974|gb|EGA81251.1| Fcp1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353207|gb|EGA85507.1| Fcp1p [Saccharomyces cerevisiae VL3]
gi|392297449|gb|EIW08549.1| Fcp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 732
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 225 ERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMA 284
E +V P++ + + +L P R V++RP ++ AK FE+++ TMA
Sbjct: 219 EELVLPLMYMNDDGSMLRP--PPVRKCWYYVKVRPGLKEF----FAKVAPLFEMHIYTMA 272
Query: 285 ERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVID 341
R YAL++ +++DP G L G DR++ S + KSL +F M +VID
Sbjct: 273 TRAYALQIAKIVDPTGELFG-----DRILSRDENGSLTTKSLAKLFP---TDQSMVVVID 324
Query: 342 DRCKVW 347
DR VW
Sbjct: 325 DRGDVW 330
>gi|323307594|gb|EGA60861.1| Fcp1p [Saccharomyces cerevisiae FostersO]
Length = 732
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 225 ERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMA 284
E +V P++ + + +L P R V++RP ++ AK FE+++ TMA
Sbjct: 219 EELVLPLMYMNDDGSMLRP--PPVRKCWYYVKVRPGLKEF----FAKVAPLFEMHIYTMA 272
Query: 285 ERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVID 341
R YAL++ +++DP G L G DR++ S + KSL +F M +VID
Sbjct: 273 TRAYALQIAKIVDPTGELFG-----DRILSRDENGSLTTKSLAKLFP---TDQSMVVVID 324
Query: 342 DRCKVW 347
DR VW
Sbjct: 325 DRGDVW 330
>gi|190408503|gb|EDV11768.1| TFIIF interacting component of CTD phosphatase [Saccharomyces
cerevisiae RM11-1a]
Length = 732
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 225 ERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMA 284
E +V P++ + + +L P R V++RP ++ AK FE+++ TMA
Sbjct: 219 EELVLPLMYMNDDGSMLRP--PPVRKCWYYVKVRPGLKEF----FAKVAPLFEMHIYTMA 272
Query: 285 ERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVID 341
R YAL++ +++DP G L G DR++ S + KSL +F M +VID
Sbjct: 273 TRAYALQIAKIVDPTGELFG-----DRILSRDENGSLTTKSLAKLFP---TDQSMVVVID 324
Query: 342 DRCKVW 347
DR VW
Sbjct: 325 DRGDVW 330
>gi|448111257|ref|XP_004201796.1| Piso0_001998 [Millerozyma farinosa CBS 7064]
gi|359464785|emb|CCE88490.1| Piso0_001998 [Millerozyma farinosa CBS 7064]
Length = 830
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP E+ + + K +E+++ TMA R+YALE+ +++DP+G G DR++
Sbjct: 232 VKVRPGLEEF----LEQISKLYEMHIYTMATRNYALEIAKIIDPDGKYFG-----DRILS 282
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS K+L +F M +IDDR VW+
Sbjct: 283 RDESGSLTHKNLKRLFP---VDQSMVAIIDDRGDVWQ 316
>gi|195429765|ref|XP_002062928.1| GK19439 [Drosophila willistoni]
gi|194159013|gb|EDW73914.1| GK19439 [Drosophila willistoni]
Length = 827
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP D + + +E+++CT R+YA + +LLDPEG S ++L R C
Sbjct: 231 TRLRPGTADF----LDRMSHLYELHICTFGARNYAHMIAQLLDPEGKFF-SHRILSRDEC 285
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 286 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 316
>gi|344233336|gb|EGV65209.1| hypothetical protein CANTEDRAFT_104476 [Candida tenuis ATCC 10573]
gi|344233337|gb|EGV65210.1| hypothetical protein CANTEDRAFT_104476 [Candida tenuis ATCC 10573]
Length = 788
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 16/108 (14%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+LRP E+ + + + +E+++ TMA R+YAL + +++DPEG G DR++
Sbjct: 232 VKLRPGLEEF----LREMAEIYEMHIYTMATRNYALAIAKIIDPEGEYFG-----DRILS 282
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
+SGS K+L +F M +IDDR VW+ +D + VVP
Sbjct: 283 RDESGSLTHKNLKRLFP---VDQSMVAIIDDRGDVWQWEDN-LIKVVP 326
>gi|195353179|ref|XP_002043083.1| GM11819 [Drosophila sechellia]
gi|194127171|gb|EDW49214.1| GM11819 [Drosophila sechellia]
Length = 874
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDPEG S ++L R C
Sbjct: 242 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFF-SHRILSRDEC 296
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 297 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 327
>gi|357501219|ref|XP_003620898.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
gi|355495913|gb|AES77116.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
Length = 720
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 10/95 (10%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
V+ +LRP +R++L + + FE+Y+ TM +R Y+LEM RLLDP+G D+V
Sbjct: 266 VMTKLRPF---VRTFL-KEASEMFEMYIYTMGDRQYSLEMARLLDPQGEYFK-----DKV 316
Query: 313 VCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ G++K++ ++ L +++DD+ +VW
Sbjct: 317 ISRDDGTQKNVKDL-DLVLGTENSIVILDDKEEVW 350
>gi|294658166|ref|XP_460501.2| DEHA2F03102p [Debaryomyces hansenii CBS767]
gi|202952923|emb|CAG88814.2| DEHA2F03102p [Debaryomyces hansenii CBS767]
Length = 795
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 255 VRLRPAWED-LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
V+LRP E+ LRS +E+++ TMA R+YAL + +++DPEG G DR++
Sbjct: 232 VKLRPGLEEFLRS-----ASDLYEMHIYTMATRNYALAIAKIIDPEGEYFG-----DRIL 281
Query: 314 CVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ N+ + M ++IDDR VW+
Sbjct: 282 SRDESGSLTHKNLKRLFPVDQSMVVIIDDRGDVWQ 316
>gi|238881126|gb|EEQ44764.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 525
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 15/100 (15%)
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
+ V+LRP S + K +++E+++ TMA R+YAL + +++DP+G G DR
Sbjct: 144 TYYVKLRPG----LSEFLEKMAEKYEMHIYTMATRNYALSIAKIIDPDGKYFG-----DR 194
Query: 312 VVCV-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
++ +SGS K+L +F M ++IDDR VW+
Sbjct: 195 ILSRDESGSLTHKNLKRLFP---VDQSMVVIIDDRGDVWQ 231
>gi|195586452|ref|XP_002082988.1| GD24941 [Drosophila simulans]
gi|194194997|gb|EDX08573.1| GD24941 [Drosophila simulans]
Length = 877
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDPEG S ++L R C
Sbjct: 245 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFF-SHRILSRDEC 299
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 300 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 330
>gi|149241937|ref|XP_001526384.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450507|gb|EDK44763.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 883
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP + + K +++E+++ TMA R+YAL + +++DPEG G DR++
Sbjct: 232 VKVRPGL----AEFLKKMDEKYEMHIYTMATRNYALSIAKIIDPEGKYFG-----DRILS 282
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS K+L +F M ++IDDR VW+
Sbjct: 283 RDESGSLTHKNLKRLFP---VDQSMVVIIDDRGDVWQ 316
>gi|341882050|gb|EGT37985.1| hypothetical protein CAEBREN_32558 [Caenorhabditis brenneri]
Length = 673
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 229 RPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDY 288
+P+ E++ +TR +R + +LRP + + K +E+++ T +R Y
Sbjct: 160 KPMSEDSEKHKDITRYGLNHR--KYITKLRPHT----TEFLNKMATMYEMHIVTYGQRQY 213
Query: 289 ALEMWRLLDPEGHLIGSKQL-LDRVVCVKSGSRK-SLLNVFQRGL--CHPKMAMVIDDRC 344
A ++ ++LDPE L G + L D + + +R ++ +FQ+ L C + ++IDDR
Sbjct: 214 AHKIAQILDPEARLFGQRILSRDELFSAQHKTRNLKVIILFQKALFPCGDNLVVIIDDRA 273
Query: 345 KVW 347
VW
Sbjct: 274 DVW 276
>gi|320164786|gb|EFW41685.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 877
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP + +A+ K FE+++ TM R YA + +LDP+G L GS+ +
Sbjct: 282 IKLRPGAREF----LAQATKLFELHIFTMGSRMYASRVAAVLDPDGALFGSRIMSRDESK 337
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY-YAPQAETAN 373
+ L +F G H M V+DDR VW R+ V +PY Y A N
Sbjct: 338 SANFKHTQLSQLFPSG--H-NMVAVLDDRIDVWA-----RLGNVIQISPYEYFLGANDIN 389
Query: 374 AVPV 377
A+P+
Sbjct: 390 ALPM 393
>gi|195489702|ref|XP_002092848.1| GE11441 [Drosophila yakuba]
gi|194178949|gb|EDW92560.1| GE11441 [Drosophila yakuba]
Length = 879
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDPEG S ++L R C
Sbjct: 247 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFF-SHRILSRDEC 301
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 302 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 332
>gi|194886507|ref|XP_001976627.1| GG19916 [Drosophila erecta]
gi|190659814|gb|EDV57027.1| GG19916 [Drosophila erecta]
Length = 876
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDPEG S ++L R C
Sbjct: 244 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFF-SHRILSRDEC 298
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 299 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 329
>gi|24762673|ref|NP_611934.1| Fcp1 [Drosophila melanogaster]
gi|7291810|gb|AAF47230.1| Fcp1 [Drosophila melanogaster]
Length = 880
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDPEG S ++L R C
Sbjct: 248 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFF-SHRILSRDEC 302
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 303 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 333
>gi|389637610|ref|XP_003716438.1| RNA polymerase II subunit A domain phosphatase [Magnaporthe oryzae
70-15]
gi|351642257|gb|EHA50119.1| RNA polymerase II subunit A domain phosphatase [Magnaporthe oryzae
70-15]
gi|440471327|gb|ELQ40350.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Magnaporthe oryzae Y34]
gi|440487323|gb|ELQ67117.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Magnaporthe oryzae P131]
Length = 866
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 249 RDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQL 308
R+ + V+ RP + + K FE++V TMA R YA + R++DP+ +L G
Sbjct: 221 RNYTYYVKCRPGTHEF----LNKVSNLFEMHVYTMATRAYAEHILRIIDPKKNLFG---- 272
Query: 309 LDRVVC--VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
+RV+ G K+L +F KM VIDDR VW + VVP
Sbjct: 273 -NRVISRNENKGIEKTLQRIFP---TSTKMVAVIDDRTDVWPQNRSNVIKVVP 321
>gi|367009794|ref|XP_003679398.1| hypothetical protein TDEL_0B00580 [Torulaspora delbrueckii]
gi|359747056|emb|CCE90187.1| hypothetical protein TDEL_0B00580 [Torulaspora delbrueckii]
Length = 713
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R V++RP ++ K FE+++ TMA R YALE+ +++DP+G L G
Sbjct: 218 PPVRKCWYYVKVRPGLKEF----FDKVAPLFEMHIYTMATRAYALEIAKIIDPDGSLFG- 272
Query: 306 KQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ S ++KSL +F M +VIDDR VW
Sbjct: 273 ----DRILSRDENGSITQKSLERLFP---TDQSMVVVIDDRGDVW 310
>gi|21483550|gb|AAM52750.1| SD01014p [Drosophila melanogaster]
Length = 896
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDPEG S ++L R C
Sbjct: 264 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPEGKFF-SHRILSRDEC 318
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 319 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 349
>gi|449299873|gb|EMC95886.1| hypothetical protein BAUCODRAFT_71386 [Baudoinia compniacensis UAMH
10762]
Length = 790
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R T ++LRP D + + +E+++ TMA R YA E+ +L+
Sbjct: 199 RKFQLVDDGPGGRGTWYYIKLRPGLSDFLQLV----SQYYELHIYTMATRAYAEEIAKLV 254
Query: 297 DPEGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP G K +R++ S + KSL +F KM ++IDDR VW
Sbjct: 255 DP-----GRKLFANRILSRDENGSMNSKSLKRLFP---VDTKMVVIIDDRGDVW 300
>gi|323332189|gb|EGA73600.1| Fcp1p [Saccharomyces cerevisiae AWRI796]
Length = 646
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 225 ERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMA 284
E +V P++ + + +L P R V++RP ++ AK FE+++ TMA
Sbjct: 219 EELVLPLMYMNDDGSMLRP--PPVRKCWYYVKVRPGLKEF----FAKVAPLFEMHIYTMA 272
Query: 285 ERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVID 341
R YAL++ +++DP G L G DR++ S + KSL +F M +VID
Sbjct: 273 TRAYALQIAKIVDPTGELFG-----DRILSRDENGSLTTKSLAKLFP---TDQSMVVVID 324
Query: 342 DRCKVW 347
DR VW
Sbjct: 325 DRGDVW 330
>gi|365758888|gb|EHN00710.1| Fcp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 677
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 225 ERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMA 284
E +V P++ + E VL P R V++RP ++ K FE+++ TMA
Sbjct: 169 EELVLPLMYMNEDGSVLKP--PPVRKCWYYVKVRPGLKEF----FDKVAPLFEMHIYTMA 222
Query: 285 ERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVID 341
R YA+++ +++DP G L G DR++ S + KSL +F M +VID
Sbjct: 223 TRAYAIQIAKIVDPTGELFG-----DRILSRDENGSLTTKSLAKLFP---TDQSMVVVID 274
Query: 342 DRCKVW 347
DR VW
Sbjct: 275 DRGDVW 280
>gi|195121496|ref|XP_002005256.1| GI20391 [Drosophila mojavensis]
gi|193910324|gb|EDW09191.1| GI20391 [Drosophila mojavensis]
Length = 880
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + K + +E+++CT R+YA + +LLDP+G S ++L R C
Sbjct: 229 TRLRPG----TAEFLEKMSELYELHICTFGARNYAHMIAQLLDPDGKFF-SHRILSRDEC 283
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 284 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 314
>gi|50306333|ref|XP_453140.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642274|emb|CAH00236.1| KLLA0D01595p [Kluyveromyces lactis]
Length = 719
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R + V+LRP L+ + A FE+++ TMA R YA E+ +++DP G L G
Sbjct: 215 PPARKSWYYVKLRPG---LKEFFEAVS-PHFEMHIYTMATRSYAHEIAKIIDPTGELFG- 269
Query: 306 KQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ S + KSL +F M +VIDDR VW
Sbjct: 270 ----DRILSRDENGSLTTKSLERLFPMDQS---MVVVIDDRGDVW 307
>gi|345568228|gb|EGX51125.1| hypothetical protein AOL_s00054g501 [Arthrobotrys oligospora ATCC
24927]
Length = 854
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 18/112 (16%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+LRP L+ +L + K +E ++ TM R YA+ + +++DPEG + G + +L R
Sbjct: 216 VKLRPG---LKRFL-SNISKIYECHIYTMGTRAYAMSIAKIVDPEGSIFGER-ILSR--- 267
Query: 315 VKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364
+SGS KSL +F KM ++IDDR VW+ D + TPY
Sbjct: 268 DESGSLTSKSLERLFP---VDTKMVVIIDDRGDVWKWSDN-----LIKVTPY 311
>gi|388580688|gb|EIM21001.1| FCP1-like phosphatase [Wallemia sebi CBS 633.66]
Length = 510
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
V+ RP + + K FE++V TM R YAL + +L+DP G G + +L R
Sbjct: 124 FVKFRPGLMEFLDNM----NKLFEMHVYTMGTRSYALAICQLIDPSGKYFGER-ILSR-- 176
Query: 314 CVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWED 349
+SGS +KSL +F M ++IDDR VW D
Sbjct: 177 -DESGSFTQKSLQRLFP---TDTSMCVIIDDRADVWGD 210
>gi|260949511|ref|XP_002619052.1| hypothetical protein CLUG_00211 [Clavispora lusitaniae ATCC 42720]
gi|238846624|gb|EEQ36088.1| hypothetical protein CLUG_00211 [Clavispora lusitaniae ATCC 42720]
Length = 776
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+LRP L+ +L A+ K +E+++ TMA R+YAL + ++DP+G G DR++
Sbjct: 229 VKLRPG---LKEFL-AEVSKLYELHIYTMATRNYALAIASIIDPDGKYFG-----DRILS 279
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ N+ + M ++IDDR VW+
Sbjct: 280 RDESGSLTHKNLRRLFPVDQSMVVIIDDRGDVWQ 313
>gi|406602036|emb|CCH46356.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Wickerhamomyces ciferrii]
Length = 720
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 14/107 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP ED + + K +E+++ TM ++YA + +++DP+G G + +L R
Sbjct: 241 VKMRPGLEDF----LKRIAKIYELHIYTMGTKEYARSIAKIIDPDGEYFGER-ILSR--- 292
Query: 315 VKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
+SGS +KSL +F M ++IDDR VW D + VVP
Sbjct: 293 DESGSLTQKSLERLFP---TDTSMVVIIDDRGDVWNWSDH-LIKVVP 335
>gi|453084575|gb|EMF12619.1| hypothetical protein SEPMUDRAFT_149240 [Mycosphaerella populorum
SO2202]
Length = 848
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 251 TSVLVRLRPAWEDLRSYLIAKG-RKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLL 309
T ++ RP L+S+L KG + +E+++ TM R YA + +++DP+G + G
Sbjct: 213 TWYYIKQRPG---LQSFL--KGLSELYEMHIYTMGTRTYAEGVAKIIDPDGRVFG----- 262
Query: 310 DRVVC-VKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR+V +SGS KSL +F KM ++IDDR VW
Sbjct: 263 DRIVTRTESGSDKEKSLKRLFP---TDSKMVVIIDDRADVW 300
>gi|448097224|ref|XP_004198617.1| Piso0_001998 [Millerozyma farinosa CBS 7064]
gi|359380039|emb|CCE82280.1| Piso0_001998 [Millerozyma farinosa CBS 7064]
Length = 830
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP E + + K +E+++ TMA R+YALE+ +++DP G G DR++
Sbjct: 232 VKVRPGLEQF----LEQISKLYEMHIYTMATRNYALEIAKIIDPNGKYFG-----DRILS 282
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS K+L +F M +IDDR VW+
Sbjct: 283 RDESGSLTHKNLKRLFP---VDQSMVAIIDDRGDVWQ 316
>gi|195170374|ref|XP_002025988.1| GL10108 [Drosophila persimilis]
gi|194110852|gb|EDW32895.1| GL10108 [Drosophila persimilis]
Length = 757
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDP+G S ++L R C
Sbjct: 129 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPDGKFF-SHRILSRDEC 183
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 184 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 214
>gi|448520991|ref|XP_003868400.1| Fcp1 protein [Candida orthopsilosis Co 90-125]
gi|380352740|emb|CCG25496.1| Fcp1 protein [Candida orthopsilosis]
Length = 788
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP S + K ++E+++ TMA R+YAL + +++DP+G G DR++
Sbjct: 232 VKVRPG----LSEFLQKMDTKYEMHIYTMATRNYALAIAKIIDPDGKYFG-----DRILS 282
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS K+L +F M ++IDDR VW+
Sbjct: 283 RDESGSLTHKNLKRLFP---VDQSMVVIIDDRGDVWQ 316
>gi|440638319|gb|ELR08238.1| hypothetical protein GMDG_03040 [Geomyces destructans 20631-21]
Length = 1765
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP ++ + +++E++V TM R YA E+ +++DPE L G DR++
Sbjct: 220 IKMRPGL----AHFLTTIAEKYELHVYTMGTRAYAQEIAKIVDPEHKLFG-----DRIIS 270
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
S + K+L +F KM ++IDDR VW + VVP
Sbjct: 271 RDENGSLTAKTLSRLFP---VDTKMVVIIDDRADVWPRNRSNLIKVVP 315
>gi|198460927|ref|XP_001361849.2| GA11510 [Drosophila pseudoobscura pseudoobscura]
gi|198137180|gb|EAL26428.2| GA11510 [Drosophila pseudoobscura pseudoobscura]
Length = 873
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDP+G S ++L R C
Sbjct: 231 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPDGKFF-SHRILSRDEC 285
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 286 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 316
>gi|254568460|ref|XP_002491340.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031137|emb|CAY69060.1| hypothetical protein PAS_chr2-1_0845 [Komagataella pastoris GS115]
gi|328352145|emb|CCA38544.1| hypothetical protein PP7435_Chr2-0862 [Komagataella pastoris CBS
7435]
Length = 733
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+LRP LR +L +R+E+++ TMA R YA E+ +++DP+ G DR++
Sbjct: 239 VKLRPH---LREFL-EHVSERYELHIYTMATRQYAKEIAKIIDPDEKYFG-----DRILS 289
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+SGS +KSL +F M +VIDDR VW
Sbjct: 290 RDESGSLTQKSLQRLFP---VDTSMVVVIDDRGDVW 322
>gi|190346120|gb|EDK38128.2| hypothetical protein PGUG_02226 [Meyerozyma guilliermondii ATCC
6260]
Length = 732
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP ED + + + +E++V TMA R+YAL + ++DP+G G DR++
Sbjct: 184 VKVRPGLEDF----LKRVSQLYEMHVYTMATRNYALAIAHIIDPDGRYFG-----DRILS 234
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS K+L +F M ++IDDR VW+
Sbjct: 235 RDESGSLTHKNLRRLFP---VDQSMVVIIDDRGDVWQ 268
>gi|195440020|ref|XP_002067857.1| GK12500 [Drosophila willistoni]
gi|194163942|gb|EDW78843.1| GK12500 [Drosophila willistoni]
Length = 657
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK 316
LRP + + + + +E+++CT R YA + +L+DPEG L S ++L R C
Sbjct: 234 LRPG----TTQFLERMSQMYELHICTFGARKYAHMIAQLIDPEGKLF-SHRILSRDECFN 288
Query: 317 SGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G KM +IDDR VW
Sbjct: 289 ATSKMDNLKALFPNG---DKMVCIIDDREDVW 317
>gi|410076480|ref|XP_003955822.1| hypothetical protein KAFR_0B03910 [Kazachstania africana CBS 2517]
gi|372462405|emb|CCF56687.1| hypothetical protein KAFR_0B03910 [Kazachstania africana CBS 2517]
Length = 724
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R V++RP L+ + K FE+++ TMA R YALE+ +++DP G L G+
Sbjct: 227 PTPRKCWYYVKVRPG---LKEFF-KKVAPLFEMHIYTMATRAYALEITKIIDPTGELFGN 282
Query: 306 KQL-LDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ L D + S S + L Q M ++IDDR VW
Sbjct: 283 RILSRDENGSLTSKSLERLFPTDQ------SMVIIIDDRGDVW 319
>gi|429963056|gb|ELA42600.1| FCP1-like phosphatase, phosphatase domain-containing protein
[Vittaforma corneae ATCC 50505]
Length = 445
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 251 TSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLD 310
T V+LRP + + K K FE+++ TM R+Y E+ + +DP G G D
Sbjct: 111 TMFYVKLRPHL----NRFLEKISKMFEIHIYTMGTREYVTEICKAIDPNGIYFG-----D 161
Query: 311 RVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
R+V ++ + L +R C + ++IDDR VW
Sbjct: 162 RIVS-RNENFNELKKSIERITCISRNVVIIDDRADVW 197
>gi|336259270|ref|XP_003344437.1| hypothetical protein SMAC_08633 [Sordaria macrospora k-hell]
gi|380087533|emb|CCC05319.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 878
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 19/98 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP ED + K +E++V TM R YA + R++DPE L G +RV+
Sbjct: 220 IKMRPGLEDF----LKKISTMYELHVYTMGTRAYAQNVARIVDPEKKLFG-----NRVI- 269
Query: 315 VKSGSRKSLLNVFQRGL-----CHPKMAMVIDDRCKVW 347
SR N++ + L KM ++IDDR VW
Sbjct: 270 ----SRDENGNMYAKSLQRLFPVSTKMVVIIDDRADVW 303
>gi|354545519|emb|CCE42247.1| hypothetical protein CPAR2_807960 [Candida parapsilosis]
Length = 786
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP S + K ++E+++ TMA R+YAL + +++DP+G G DR++
Sbjct: 232 VKVRPG----LSEFLEKMDTKYEMHIYTMATRNYALAIAKIIDPDGKYFG-----DRILS 282
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ N+ + M ++IDDR VW+
Sbjct: 283 RDESGSLTHKNLKRLFPVDQSMVVIIDDRGDVWQ 316
>gi|195029035|ref|XP_001987380.1| GH21892 [Drosophila grimshawi]
gi|193903380|gb|EDW02247.1| GH21892 [Drosophila grimshawi]
Length = 889
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + + +E+++CT R+YA + +LLDP+G S ++L R C
Sbjct: 225 TRLRPG----TAEFLERMSQLYELHICTFGARNYAHMIAQLLDPDGKFF-SHRILSRDEC 279
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 280 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 310
>gi|281206665|gb|EFA80851.1| putative tfiif-interacting component of the c-terminal domain
phosphatase [Polysphondylium pallidum PN500]
Length = 881
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP L +L K+FE+++ TM R+YALE+ +L+D + L +++L R
Sbjct: 324 IKLRPF---LYKFL-EDVNKKFELHIYTMGTRNYALEIAKLIDEKQELF-KERILSRDDT 378
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANA 374
S K+L +F C M +++DDR VW+ + + V + P Y+ + N
Sbjct: 379 T-DMSFKTLQRLFP---CDDSMVLIVDDRSDVWK-RSKNLVQISPYL--YFVGCKDMVNL 431
Query: 375 VP 376
+P
Sbjct: 432 LP 433
>gi|328872613|gb|EGG20980.1| putative tfiif-interacting component of the c-terminal domain
phosphatase [Dictyostelium fasciculatum]
Length = 757
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 248 NRDTSVLVRLRPA-WEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
N + ++LRP +E LR + FE+++ TM R+YA ++ L+DP+ + +
Sbjct: 248 NGNQRYFIKLRPHLYEFLREV-----NRLFELHIYTMGTRNYAQKIASLVDPKQRVFKER 302
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYA 366
+L R + K+L +F C M +++DDR VW+ K + + +VP Y+
Sbjct: 303 -VLSRDDTPNDMNHKTLKRLFP---CDDSMVLIVDDRSDVWK-KSKNLIQIVPYL--YFV 355
Query: 367 PQAETANAVPV 377
+ N +P
Sbjct: 356 GCKDMVNLLPT 366
>gi|396499223|ref|XP_003845421.1| similar to RNA polymerase II subunit A C-terminal domain
phosphatase [Leptosphaeria maculans JN3]
gi|312222002|emb|CBY01942.1| similar to RNA polymerase II subunit A C-terminal domain
phosphatase [Leptosphaeria maculans JN3]
Length = 887
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+ RP ED + K +E++V TMA R YA + +++DP+ G DR++
Sbjct: 301 VKKRPGLEDF----FKRMSKLYEMHVYTMATRAYAQAVCKIIDPDRRYFG-----DRILS 351
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAET 371
+ KSL +FQ + M ++IDDR VW+ P + VP F + P A
Sbjct: 352 RDENYTDKTKSLSRLFQ----NTTMVVIIDDRADVWQ--YSPHLVRVPVFN--FFPGAGD 403
Query: 372 ANA 374
NA
Sbjct: 404 INA 406
>gi|21914376|gb|AAM81360.1|AF522873_3 RNA polymerase II C-terminal domain phosphatase component
[Leptosphaeria maculans]
Length = 804
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+ RP ED + K +E++V TMA R YA + +++DP+ G DR++
Sbjct: 218 VKKRPGLEDF----FKRMSKLYEMHVYTMATRAYAQAVCKIIDPDRRYFG-----DRILS 268
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAET 371
+ KSL +FQ + M ++IDDR VW+ P + VP F + P A
Sbjct: 269 RDENYTDKTKSLSRLFQ----NTTMVVIIDDRADVWQ--YSPHLVRVPVFN--FFPGAGD 320
Query: 372 ANA 374
NA
Sbjct: 321 INA 323
>gi|390333352|ref|XP_791406.3| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Strongylocentrotus purpuratus]
Length = 673
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKS-LLNVFQRGLCHP 334
+++++ TM R YA + ++DPEG S ++L R CV S+K+ L ++F RG
Sbjct: 90 YQLHIFTMGVRLYAHTVAEIIDPEGKFF-SHRILSRDECVDPHSKKANLRSIFPRG---D 145
Query: 335 KMAMVIDDRCKVW 347
KM +IDDR VW
Sbjct: 146 KMVCIIDDRDDVW 158
>gi|194757423|ref|XP_001960964.1| GF11242 [Drosophila ananassae]
gi|190622262|gb|EDV37786.1| GF11242 [Drosophila ananassae]
Length = 854
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + + +E+++CT R+YA + +LLDP+G S ++L R C
Sbjct: 242 TRLRPG----TAEFLESMSQLYELHICTFGARNYAHMIAQLLDPDGKFF-SHRILSRDEC 296
Query: 315 VKSGSR-KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ +L +F G M +IDDR VW
Sbjct: 297 FNATSKTDNLKALFPNG---DSMVCIIDDREDVW 327
>gi|146421209|ref|XP_001486555.1| hypothetical protein PGUG_02226 [Meyerozyma guilliermondii ATCC
6260]
Length = 732
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP ED + + + +E++V TMA R+YAL + ++DP+G G DR++
Sbjct: 184 VKVRPGLEDF----LKRVSQLYEMHVYTMATRNYALAIAHIIDPDGRYFG-----DRILS 234
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS K+L +F M ++IDDR VW+
Sbjct: 235 RDESGSLTHKNLRRLFP---VDQLMVVIIDDRGDVWQ 268
>gi|50838820|ref|NP_001002873.1| RNA polymerase II subunit A C-terminal domain phosphatase [Danio
rerio]
gi|49618915|gb|AAT68042.1| RNA polymerase II CTD phosphatase [Danio rerio]
Length = 947
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K FE++V T R YA + LDPE L S ++L R C
Sbjct: 210 TRLRPHCKDF----LEKIAKLFELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 264
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 265 IDPFSKTGNLKNLFP---CGDSMVCIIDDREDVWK 296
>gi|164658688|ref|XP_001730469.1| hypothetical protein MGL_2265 [Malassezia globosa CBS 7966]
gi|159104365|gb|EDP43255.1| hypothetical protein MGL_2265 [Malassezia globosa CBS 7966]
Length = 364
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 19/98 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+LRP L+++L + +E++V TM R YA + R++DP+GHL G++ L
Sbjct: 121 VKLRPG---LQAFLQSVS-PMYEMHVYTMGTRSYADCICRIVDPDGHLFGARIL------ 170
Query: 315 VKSGSRKSLLNVFQRGLCH-----PKMAMVIDDRCKVW 347
SR N Q+ L M +VIDDR VW
Sbjct: 171 ----SRDENGNEVQKSLSRLFPISTDMVVVIDDRADVW 204
>gi|344242866|gb|EGV98969.1| hypothetical protein I79_008270 [Cricetulus griseus]
Length = 848
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCRDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDVN 211
Query: 374 AVP 376
A P
Sbjct: 212 APP 214
>gi|366991271|ref|XP_003675401.1| hypothetical protein NCAS_0C00420 [Naumovozyma castellii CBS 4309]
gi|342301266|emb|CCC69032.1| hypothetical protein NCAS_0C00420 [Naumovozyma castellii CBS 4309]
Length = 725
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R V++RP L+ +L K FE+++ TMA R YA E+ +++DP G L G
Sbjct: 226 PPLRKCWYYVKVRPG---LKEFL-EKIAPLFEMHIYTMATRAYASEIAKIIDPNGDLFG- 280
Query: 306 KQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ S + KSL +F M +VIDDR VW
Sbjct: 281 ----DRILSRDENGSMTTKSLERLFP---TDQSMVIVIDDRGDVW 318
>gi|164429292|ref|XP_958446.2| hypothetical protein NCU11408 [Neurospora crassa OR74A]
gi|157073422|gb|EAA29210.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 868
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 19/98 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP ED + K +E++V TM R YA + R++DP+ L G +RV+
Sbjct: 220 IKMRPGLEDF----LKKISTMYELHVYTMGTRAYAQNVARIVDPDKKLFG-----NRVI- 269
Query: 315 VKSGSRKSLLNVFQRGL-----CHPKMAMVIDDRCKVW 347
SR N++ + L KM ++IDDR VW
Sbjct: 270 ----SRDENGNMYAKSLQRLFPVSTKMVVIIDDRADVW 303
>gi|344301528|gb|EGW31840.1| hypothetical protein SPAPADRAFT_140004 [Spathaspora passalidarum
NRRL Y-27907]
Length = 770
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP + + + ++E+++ TMA R+YAL + ++DPEG G DR++
Sbjct: 239 VKVRPGLAEF----LEQVSNKYEMHIYTMATRNYALAIANIIDPEGKYFG-----DRILS 289
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ N+ + M ++IDDR VW+
Sbjct: 290 RDESGSLTHKNLKRLFPVDQSMVVIIDDRGDVWQ 323
>gi|336466789|gb|EGO54953.1| hypothetical protein NEUTE1DRAFT_84976 [Neurospora tetrasperma FGSC
2508]
gi|350288620|gb|EGZ69856.1| hypothetical protein NEUTE2DRAFT_160171 [Neurospora tetrasperma
FGSC 2509]
Length = 867
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 19/98 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP ED + K +E++V TM R YA + R++DP+ L G +RV+
Sbjct: 220 IKMRPGLEDF----LKKISTMYELHVYTMGTRAYAQNVARIVDPDKKLFG-----NRVI- 269
Query: 315 VKSGSRKSLLNVFQRGL-----CHPKMAMVIDDRCKVW 347
SR N++ + L KM ++IDDR VW
Sbjct: 270 ----SRDENGNMYAKSLQRLFPVSTKMVVIIDDRADVW 303
>gi|242015474|ref|XP_002428378.1| RNA polymerase II ctd phosphatase, putative [Pediculus humanus
corporis]
gi|212512990|gb|EEB15640.1| RNA polymerase II ctd phosphatase, putative [Pediculus humanus
corporis]
Length = 781
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 255 VRLRPAWEDLRSY-LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
R+RP R++ + + K +E+++CT R+YA + LDP+G S ++L R
Sbjct: 183 TRIRP-----RTHKFLEEISKYYELHICTFGARNYAHMIAMFLDPDGKYF-SHRILSRDE 236
Query: 314 CVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
C + S+ + L C M +IDDR VW + +HV P ++ N
Sbjct: 237 CFNANSKTANLKAL--FPCGDNMVCIIDDREDVW-NFAANLIHVKPY---HFFKHTGDIN 290
Query: 374 AVPVLCVARNVACNVRGCFFKEFD 397
A P L +N V G F D
Sbjct: 291 APPGL--TKNENDEVDGFDFTNLD 312
>gi|410294550|gb|JAA25875.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 [Pan troglodytes]
Length = 961
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 84/226 (37%), Gaps = 44/226 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ L N+F C M +IDDR VW K P + V + + A
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYVYFQGTGDMNAP 332
Query: 374 AVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANF 433
R + RG E +P V +
Sbjct: 333 PGSRESQTRKKVNHSRGTEVSE----------------------PSPPVRD--------- 361
Query: 434 APNGSTNAPMSEGLNGLEV-ERRLNQSDEKYVVDSGLPSMKNSSDL 478
P G T AP E NGLE R LN S+ + DS P + D+
Sbjct: 362 -PEGGTQAPGVEPSNGLEKPARELNGSEAATLRDSPRPGKPDERDI 406
>gi|410215194|gb|JAA04816.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 [Pan troglodytes]
gi|410254644|gb|JAA15289.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 [Pan troglodytes]
gi|410331971|gb|JAA34932.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 [Pan troglodytes]
Length = 961
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 84/226 (37%), Gaps = 44/226 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ L N+F C M +IDDR VW K P + V + + A
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYVYFQGTGDMNAP 332
Query: 374 AVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANF 433
R + RG E +P V +
Sbjct: 333 PGSRESQTRKKVNHSRGTEVSE----------------------PSPPVRD--------- 361
Query: 434 APNGSTNAPMSEGLNGLEV-ERRLNQSDEKYVVDSGLPSMKNSSDL 478
P G T AP E NGLE R LN S+ + DS P + D+
Sbjct: 362 -PEGGTKAPGVEPSNGLEKPARELNGSEAATLRDSPRPGKPDERDI 406
>gi|320581076|gb|EFW95298.1| RNA Pol II CTD phosphatase component, putative [Ogataea
parapolymorpha DL-1]
Length = 743
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+LRP ++ + K K +E+++ TMA R YA + +++DP+G G DR++
Sbjct: 238 VKLRPGLQEF----LEKVSKLYELHIYTMATRSYAKSIAKIIDPDGIYFG-----DRILS 288
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+SGS +K+L +F M +VIDDR VW
Sbjct: 289 RDESGSLTQKTLKRLFP---VDTSMVVVIDDRGDVW 321
>gi|148677457|gb|EDL09404.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1, isoform CRA_a [Mus musculus]
Length = 956
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 219 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 273
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 274 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDVN 326
Query: 374 AVPV 377
A P
Sbjct: 327 APPA 330
>gi|397467065|ref|XP_003805250.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Pan paniscus]
Length = 842
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 97/261 (37%), Gaps = 52/261 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + + A
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYVYFQGTGDMNAP 213
Query: 374 AVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANF 433
R + RG E +P V +
Sbjct: 214 PGSRESQTRKKVNHSRGTEVSE----------------------PSPPVRD--------- 242
Query: 434 APNGSTNAPMSEGLNGLEV-ERRLNQSDEKYVVDSGLPSMKNSSDL----KSETSLLPVA 488
P G T AP E NGLE R LN S+ DS P + D+ ++ TS +A
Sbjct: 243 -PEGGTQAPGVEPSNGLEKPARELNGSEAATPRDSPRPGKPDERDIWPPAQAPTSSRELA 301
Query: 489 VA----SNATVPATVVPSQKP 505
A + V P Q+P
Sbjct: 302 GAPEPQGSCAQGGRVAPGQRP 322
>gi|365991295|ref|XP_003672476.1| hypothetical protein NDAI_0K00420 [Naumovozyma dairenensis CBS 421]
gi|343771252|emb|CCD27233.1| hypothetical protein NDAI_0K00420 [Naumovozyma dairenensis CBS 421]
Length = 778
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R V++RP +D K FE+++ TMA R YA E+ +++DP G L G+
Sbjct: 269 PPARKCWYYVKVRPGLKDF----FQKVAPLFEMHIYTMATRAYASEIAKIIDPTGDLFGN 324
Query: 306 KQLLDRVVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ +L R ++GS KSL +F M ++IDDR VW
Sbjct: 325 R-ILSR---DENGSLTTKSLERLFP---TDQSMVIIIDDRGDVW 361
>gi|8778093|gb|AAF79202.1| CTD phosphatase-like protein [Emericella nidulans]
Length = 409
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R VL +LRP E+ + +E+++ TM R YA + ++
Sbjct: 95 RAFQLVDDGPGMRGLLVLCKLRPGLEEF----LKNVADMYELHIYTMGTRSYAQAIANII 150
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ S+ N+ + KM ++IDDR VW
Sbjct: 151 DPDRKLFG-----DRILSRDESGSLSVKNLHRIFPVDTKMVVIIDDRGDVW 196
>gi|330930047|ref|XP_003302870.1| hypothetical protein PTT_14854 [Pyrenophora teres f. teres 0-1]
gi|311321498|gb|EFQ89046.1| hypothetical protein PTT_14854 [Pyrenophora teres f. teres 0-1]
Length = 803
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP +D + K +E++V TMA R YA + +++DPE G DR++
Sbjct: 218 VKMRPGLKDF----FDRVSKLYEMHVYTMATRAYAQAVAKIIDPERKYFG-----DRILS 268
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAET 371
+ KSL +F + M ++IDDR VW+ P + VP F + P A
Sbjct: 269 RDENYTDKLKSLTRLFYQNTA---MCVIIDDRADVWQ--YSPHLVRVPVFN--FFPGAGD 321
Query: 372 ANA 374
NA
Sbjct: 322 INA 324
>gi|34328280|ref|NP_080571.2| RNA polymerase II subunit A C-terminal domain phosphatase [Mus
musculus]
gi|46395722|sp|Q7TSG2.1|CTDP1_MOUSE RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase; AltName: Full=TFIIF-associating CTD
phosphatase
gi|31419683|gb|AAH53435.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 [Mus musculus]
Length = 960
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDVN 330
Query: 374 AVPV 377
A P
Sbjct: 331 APPA 334
>gi|189211133|ref|XP_001941897.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977990|gb|EDU44616.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 774
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP +D + K +E++V TMA R YA + +++DPE G DR++
Sbjct: 218 VKMRPGLKDF----FDRVSKLYEMHVYTMATRAYAQAVAKIIDPERKYFG-----DRILS 268
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAET 371
+ KSL +F + M ++IDDR VW+ P + VP F + P A
Sbjct: 269 RDENYTDKLKSLTRLFYQNTA---MCVIIDDRADVWQ--YSPHLVRVPVFN--FFPGAGD 321
Query: 372 ANA 374
NA
Sbjct: 322 INA 324
>gi|157823025|ref|NP_001099601.1| RNA polymerase II subunit A C-terminal domain phosphatase [Rattus
norvegicus]
gi|149015915|gb|EDL75222.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 969
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 219 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 273
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 274 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDVN 326
Query: 374 AVP 376
A P
Sbjct: 327 APP 329
>gi|332850750|ref|XP_001144243.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase isoform 2 [Pan troglodytes]
Length = 1026
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 44/226 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ L N+F C M +IDDR VW K P + V + Y+ + N
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV-YFQGTGDM-N 330
Query: 374 AVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDANF 433
A P ++ K+ + + +SE +P V +
Sbjct: 331 APPGSRESQT---------RKKVNHSRGTEVSE-----------PSPPVRD--------- 361
Query: 434 APNGSTNAPMSEGLNGLEV-ERRLNQSDEKYVVDSGLPSMKNSSDL 478
P G T AP E NGLE R LN S+ + DS P + D+
Sbjct: 362 -PEGGTKAPGVEPSNGLEKPARELNGSEAATLRDSPRPGKPDERDI 406
>gi|148677459|gb|EDL09406.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1, isoform CRA_c [Mus musculus]
Length = 1000
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 263 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 317
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 318 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDVN 370
Query: 374 AVPV 377
A P
Sbjct: 371 APPA 374
>gi|74140094|dbj|BAE33777.1| unnamed protein product [Mus musculus]
Length = 960
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDVN 330
Query: 374 AVPV 377
A P
Sbjct: 331 APPA 334
>gi|351695852|gb|EHA98770.1| hypothetical protein GW7_03722 [Heterocephalus glaber]
Length = 963
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 221 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 275
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 276 IDPFSKTGNLKNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDMN 328
Query: 374 AVP 376
A P
Sbjct: 329 APP 331
>gi|422292668|gb|EKU19970.1| rna polymerase ii ctd phosphatase, partial [Nannochloropsis
gaditana CCMP526]
Length = 419
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK 316
LRP LR++L ++ + + + T RDYA ++ RLLDP+ L +++ R C
Sbjct: 254 LRP---HLRTFL-SQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLF-EDRIVSRDDCPD 308
Query: 317 SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVP 376
+KSL +F G+ +MA+++DD +VW+ +Q R H++P + + E N V
Sbjct: 309 LHGQKSLQRLFPGGI---EMALILDDSPQVWQG-EQSR-HLLPVLPFKFYTEFEEVNRVA 363
Query: 377 VLCVA 381
L A
Sbjct: 364 GLAPA 368
>gi|452004576|gb|EMD97032.1| hypothetical protein COCHEDRAFT_1163398 [Cochliobolus
heterostrophus C5]
Length = 803
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP +D + K +E++V TMA R YA + +++DPE G DR++
Sbjct: 218 VKMRPGLKDF----FDRVSKLYEMHVYTMATRAYAQAVAKIIDPERKYFG-----DRILS 268
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAET 371
+ KSL +F + M ++IDDR VW+ P + VP F + P A
Sbjct: 269 RDENYTDKLKSLTRLFYQNTA---MCVIIDDRADVWQ--YSPHLVRVPVFN--FFPGAGD 321
Query: 372 ANA 374
NA
Sbjct: 322 INA 324
>gi|387196292|gb|AFJ68751.1| rna polymerase ii ctd phosphatase, partial [Nannochloropsis
gaditana CCMP526]
Length = 414
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK 316
LRP LR++L ++ + + + T RDYA ++ RLLDP+ L +++ R C
Sbjct: 249 LRP---HLRTFL-SQAHALYVLTIYTHGRRDYAHQVARLLDPDRTLF-EDRIVSRDDCPD 303
Query: 317 SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVP 376
+KSL +F G+ +MA+++DD +VW+ +Q R H++P + + E N V
Sbjct: 304 LHGQKSLQRLFPGGI---EMALILDDSPQVWQG-EQSR-HLLPVLPFKFYTEFEEVNRVA 358
Query: 377 VLCVA 381
L A
Sbjct: 359 GLAPA 363
>gi|406865754|gb|EKD18795.1| FCP1-like phosphatase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 863
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP + +++ + +E++V TM R YA+ + +++DP+ L G DR++
Sbjct: 224 IKMRPGLAEFLAHI----SELYELHVYTMGTRAYAINIAKIVDPDKKLFG-----DRII- 273
Query: 315 VKSGSRKSLLNVFQRGLCH-----PKMAMVIDDRCKVWEDKDQPRVHVVP 359
SR NV + L KM ++IDDR VW + VVP
Sbjct: 274 ----SRDENGNVTAKSLARLFPVDTKMVVIIDDRADVWPQNRPNLIKVVP 319
>gi|451853161|gb|EMD66455.1| hypothetical protein COCSADRAFT_112846 [Cochliobolus sativus
ND90Pr]
Length = 803
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP +D + K +E++V TMA R YA + +++DPE G DR++
Sbjct: 218 VKMRPGLKDF----FDRVSKLYEMHVYTMATRAYAQAVAKIIDPERKYFG-----DRILS 268
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAET 371
+ KSL +F + M ++IDDR VW+ P + VP F + P A
Sbjct: 269 RDENYTDKLKSLTRLFYQNTA---MCVIIDDRADVWQ--YSPHLVRVPVFN--FFPGAGD 321
Query: 372 ANA 374
NA
Sbjct: 322 INA 324
>gi|169600911|ref|XP_001793878.1| hypothetical protein SNOG_03310 [Phaeosphaeria nodorum SN15]
gi|160705543|gb|EAT90041.2| hypothetical protein SNOG_03310 [Phaeosphaeria nodorum SN15]
Length = 810
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP L+ + K K +E++V TMA R YA + +++DP+ G DR++
Sbjct: 218 VKMRPG---LKEFF-DKMSKLYEMHVYTMATRAYAQAIMKIIDPDRKYFG-----DRILS 268
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAF 361
L N+ + + M ++IDDR VW+ P + VP F
Sbjct: 269 RDENYTDKLKNLTRLFYQNTAMVVIIDDRADVWQ--YSPHLVRVPVF 313
>gi|402903421|ref|XP_003914564.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase isoform 3 [Papio anubis]
Length = 846
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 190
>gi|157109625|ref|XP_001650754.1| RNA polymerase ii ctd phosphatase [Aedes aegypti]
gi|108868428|gb|EAT32653.1| AAEL015142-PA, partial [Aedes aegypti]
Length = 569
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + +AK +E+++CT R+YA + + LD +G L S ++L R C
Sbjct: 186 TRLRPGALEF----LAKMHPYYELHICTFGARNYAHMIAQFLDRDGKLF-SHRILSRDEC 240
Query: 315 VKSGSRKSLLNVFQRGL--CHPKMAMVIDDRCKVW 347
+ S+ L R L C M +IDDR VW
Sbjct: 241 FNATSKTDNL----RALFPCGDSMVCIIDDREDVW 271
>gi|357601986|gb|EHJ63229.1| putative RNA polymerase II subunit A C-terminal domain phosphatase
[Danaus plexippus]
Length = 683
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P N+ RLRP + + K +E++VCT R YA + LLDP+ S
Sbjct: 178 PGNQGRWCHTRLRPKTHEF----LESAAKNYELHVCTFGARQYAHAITELLDPQKKFF-S 232
Query: 306 KQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
++L R C + ++ + L C M +IDDR VW
Sbjct: 233 HRILSRDECFDARTKSANLKAL--FPCGDNMVCIIDDREDVW 272
>gi|357450477|ref|XP_003595515.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
gi|355484563|gb|AES65766.1| RNA polymerase II C-terminal domain phosphatase-like protein
[Medicago truncatula]
Length = 382
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 14/96 (14%)
Query: 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
+ +LRP +R++L + K FE+Y+ TM +R Y+LEM RLLDP+G K D+V+
Sbjct: 128 MAKLRPF---VRTFL-KEASKMFEMYIYTMGDRRYSLEMARLLDPQG-----KFFKDKVI 178
Query: 314 CVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
G+ ++ LN+ L +++DD KVW
Sbjct: 179 SRDDGTEMKEKDLNLV---LGTESSILILDDNKKVW 211
>gi|118784887|ref|XP_314000.3| AGAP005119-PA [Anopheles gambiae str. PEST]
gi|116128258|gb|EAA09414.3| AGAP005119-PA [Anopheles gambiae str. PEST]
Length = 822
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + +AK +E+++CT R+YA + + LD +G+ S ++L R C
Sbjct: 187 TRLRPGALEF----LAKMHPYYELHICTFGARNYAHMIAQFLDKDGNFF-SHRILSRDEC 241
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ L C M +IDDR VW
Sbjct: 242 FNATSKTDNLKAL--FPCGDSMVCIIDDREDVW 272
>gi|440804367|gb|ELR25244.1| FCP1like phosphatase, phosphatase subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 930
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
L R E ++LRP E+ + + FE+++ TM R YA ++ +++DPE
Sbjct: 204 LYRFTLEGNPHKFYLKLRPHLEEF----LMGVKDLFELHIYTMGSRSYARKVAQIIDPEQ 259
Query: 301 HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA 360
L + ++ R C + K+L +F M M+IDDR VW +
Sbjct: 260 KLF-RENIVSRDECGNVMNLKNLQRIFP---VDDSMVMIIDDRVDVWGTSKN-----LIK 310
Query: 361 FTPYYAPQAETANAVP 376
PYY NA+P
Sbjct: 311 IEPYYFFNDAKVNALP 326
>gi|19115680|ref|NP_594768.1| CTD phosphatase Fcp1 [Schizosaccharomyces pombe 972h-]
gi|26393804|sp|Q9P376.1|FCP1_SCHPO RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase; AltName: Full=CTD phosphatase fcp1
gi|9588462|emb|CAC00553.1| CTD phosphatase Fcp1 [Schizosaccharomyces pombe]
Length = 723
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 16/117 (13%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P + ++ RP + + K + +E+++ TM + YA E+ +++DP G L
Sbjct: 211 PSGYTSCYYIKFRPGL----AQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQ- 265
Query: 306 KQLLDRVVCVK-SGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
DRV+ SGS +KSL +F C M +VIDDR VW D + + VVP
Sbjct: 266 ----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVW-DWNPNLIKVVP 314
>gi|403222664|dbj|BAM40795.1| uncharacterized protein TOT_030000057 [Theileria orientalis strain
Shintoku]
Length = 656
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 39/191 (20%)
Query: 182 AELKRYMDDRTLLKQYTENDCV---MDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERN 238
+E+ +Y++DR L C+ +DN V Q PP++ I I I +
Sbjct: 187 SEITKYLEDRKL--------CLVLDLDNTLVHATSQS---PPAD----IDVETIEISSSS 231
Query: 239 LVLTRINPENRDT--SVLVRLRPA-WEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRL 295
++ T + E + + +LRP ++ RS KR+++++ TM R +A R+
Sbjct: 232 VLKTIVYNETETSYCNSFFKLRPGIFKFFRSV-----SKRYKLFLFTMGTRQHAQSALRI 286
Query: 296 LDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDK-DQPR 354
LDP+G G +RV C ++ SR + ++ + H + +V+DD VW K +
Sbjct: 287 LDPQGVYFG-----NRVFC-RNDSRSCMKSLDRLFPNHKNLVLVMDDSEYVWTSKLALIK 340
Query: 355 VHVVPAFTPYY 365
VH PYY
Sbjct: 341 VH------PYY 345
>gi|355702027|gb|EHH29380.1| RNA polymerase II subunit A C-terminal domain phosphatase, partial
[Macaca mulatta]
Length = 861
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 118 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 172
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 173 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 204
>gi|296088193|emb|CBI35709.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
+L +LRP + + K FE+Y+ TM ER YALEM +LLDPE + S +++ +
Sbjct: 3 MLTKLRPYVHTF----LKEASKMFEMYIYTMGERSYALEMAKLLDPE-RVYFSSRVISQA 57
Query: 313 VCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
C + + L+V L +++DD VW+
Sbjct: 58 DCTQRHQKG--LDVV---LGQESAVLILDDTESVWQ 88
>gi|354479392|ref|XP_003501894.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Cricetulus griseus]
Length = 978
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 234 TRLRPHCRDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 288
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ +L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 289 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDVN 341
Query: 374 AVP 376
A P
Sbjct: 342 APP 344
>gi|321267522|ref|NP_001189433.1| RNA polymerase II subunit A C-terminal domain phosphatase isoform 3
[Homo sapiens]
Length = 842
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 190
>gi|3769521|gb|AAC64549.1| serine phosphatase FCP1a [Homo sapiens]
Length = 842
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 190
>gi|402903417|ref|XP_003914562.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase isoform 1 [Papio anubis]
Length = 965
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|119587036|gb|EAW66632.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1, isoform CRA_e [Homo sapiens]
Length = 748
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 190
>gi|355755122|gb|EHH58989.1| RNA polymerase II subunit A C-terminal domain phosphatase, partial
[Macaca fascicularis]
Length = 861
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 118 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 172
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 173 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 204
>gi|340518072|gb|EGR48314.1| predicted protein [Trichoderma reesei QM6a]
Length = 594
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP L+ +L A K +E++V TM R YAL + R++DP+ L G +RV+
Sbjct: 217 IKLRPG---LKEFLEAVSTK-YELHVYTMGTRAYALNIARIVDPDKKLFG-----NRVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
S + KSL +F M ++IDDR VW + + V P
Sbjct: 268 RDENGSITAKSLQRLFP---VSTDMVVIIDDRADVWPNNRPNLIKVAP 312
>gi|426386293|ref|XP_004059621.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase isoform 1 [Gorilla gorilla gorilla]
gi|426386295|ref|XP_004059622.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase isoform 2 [Gorilla gorilla gorilla]
Length = 842
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 190
>gi|50294127|ref|XP_449475.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528789|emb|CAG62451.1| unnamed protein product [Candida glabrata]
Length = 758
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Query: 239 LVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298
L+ P R V++RP L+ + K +E+++ TMA R YALE+ +++DP
Sbjct: 218 LIYMGPKPPVRTCWYYVKIRPG---LKEFF-EKIAPLYEMHIYTMATRAYALEIAKIIDP 273
Query: 299 EGHLIGSKQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ L G DR++ S ++KSL +F M +VIDDR VW
Sbjct: 274 DKSLFG-----DRILSRDENGSLTQKSLTRLFP---TDQSMVVVIDDRGDVW 317
>gi|402903419|ref|XP_003914563.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase isoform 2 [Papio anubis]
Length = 871
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|5326898|gb|AAD42088.1| RNA polymerase II CTD phosphatase [Homo sapiens]
Length = 961
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDRKDVWK 309
>gi|294935258|ref|XP_002781353.1| hypothetical protein Pmar_PMAR020737 [Perkinsus marinus ATCC 50983]
gi|239891934|gb|EER13148.1| hypothetical protein Pmar_PMAR020737 [Perkinsus marinus ATCC 50983]
Length = 979
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335
+E+Y+ T R+YA+ + + LDP GS L + + K+L +F + +
Sbjct: 597 YELYLYTHGTREYAIRLLKALDPSARYFGSPPRLIARPTQSALTCKTLSRIFP---SNHR 653
Query: 336 MAMVIDDRCKVWEDKDQPRVHVVPAFTPY-YAPQAE 370
+A+++DDR VWE KD H + TPY + P +E
Sbjct: 654 LAVIVDDRDDVWEAKDNE--HSLIKVTPYVFFPDSE 687
>gi|215794710|pdb|3EF1|A Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd
Phosphatase
Length = 442
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 16/117 (13%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P + ++ RP + + K + +E+++ TM + YA E+ +++DP G L
Sbjct: 73 PSGYTSCYYIKFRPGL----AQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQ- 127
Query: 306 KQLLDRVVCVK-SGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
DRV+ SGS +KSL +F C M +VIDDR VW D + + VVP
Sbjct: 128 ----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVW-DWNPNLIKVVP 176
>gi|348555132|ref|XP_003463378.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Cavia porcellus]
Length = 970
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|294868642|ref|XP_002765622.1| hypothetical protein Pmar_PMAR013688 [Perkinsus marinus ATCC 50983]
gi|239865701|gb|EEQ98339.1| hypothetical protein Pmar_PMAR013688 [Perkinsus marinus ATCC 50983]
Length = 956
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335
+E+Y+ T R+YA+ + + LDP GS L + + K+L +F + +
Sbjct: 574 YELYLYTHGTREYAIRLLKALDPSARYFGSPPRLIARPTQSALTCKTLSRIFP---SNHR 630
Query: 336 MAMVIDDRCKVWEDKDQPRVHVVPAFTPY-YAPQAE 370
+A+++DDR VWE KD H + TPY + P +E
Sbjct: 631 LAVIVDDRDDVWEAKDNE--HSLIKVTPYVFFPDSE 664
>gi|109122558|ref|XP_001088601.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase isoform 2 [Macaca mulatta]
Length = 964
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|312373985|gb|EFR21645.1| hypothetical protein AND_16677 [Anopheles darlingi]
Length = 857
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + +AK +E+++CT R+YA + + LD +G S ++L R C
Sbjct: 198 TRLRPGALEF----LAKMHPYYELHICTFGARNYAHMIAQFLDKDGRFF-SHRILSRDEC 252
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ L C M +IDDR VW
Sbjct: 253 FNATSKTDNLKAL--FPCGDSMVCIIDDREDVW 283
>gi|67524889|ref|XP_660506.1| hypothetical protein AN2902.2 [Aspergillus nidulans FGSC A4]
gi|40744297|gb|EAA63473.1| hypothetical protein AN2902.2 [Aspergillus nidulans FGSC A4]
gi|259486161|tpe|CBF83781.1| TPA: CTD phosphatase-related (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 829
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP E+ + + +E+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPGLEEFLENVA----EMYELHIYTMGTRSYAQAIANII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ S+ N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLSVKNLHRIFPVDTKMVVIIDDRGDVW 299
>gi|150866706|ref|XP_001386384.2| hypothetical protein PICST_63097 [Scheffersomyces stipitis CBS
6054]
gi|149387962|gb|ABN68355.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 790
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP D ++ +E+++ TMA R+YAL + +++DP G G DR++
Sbjct: 232 VKVRPGLSDFLEEIV----NLYEMHIYTMATRNYALAIAKIIDPTGKYFG-----DRILS 282
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS K+L +F M ++IDDR +W+
Sbjct: 283 RDESGSLTHKNLKRLFP---VDQSMVVIIDDRGDIWQ 316
>gi|30962890|gb|AAH52576.1| CTDP1 protein, partial [Homo sapiens]
Length = 874
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 136 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 190
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 191 IDPISKTGNLRNLFP---CGDSMVCIIDDREDVWK 222
>gi|147774299|emb|CAN76945.1| hypothetical protein VITISV_002430 [Vitis vinifera]
Length = 641
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
+L +LRP + ++L + K FE+Y+ TM ER YALEM +LLDPE + S +++ +
Sbjct: 3 MLTKLRPY---VHTFL-KEASKMFEMYIYTMGERSYALEMAKLLDPE-RVYFSSRVISQA 57
Query: 313 VCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
C + + L+V L +++DD VW+
Sbjct: 58 DCTQRHQKG--LDVV---LGQESAVLILDDTESVWQ 88
>gi|380022133|ref|XP_003694908.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase-like [Apis florea]
Length = 749
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + R +L R +E+++CT R+YA + LLD +G L S ++L R C
Sbjct: 194 TRLRP---NTRHFLSEMSR-LYELHICTFGARNYAHTVAALLDKDGTLF-SHRILSRDEC 248
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
S+ + L C + +IDDR VW+
Sbjct: 249 FDPASKTANLKAL--FPCGDDLVCIIDDREDVWQ 280
>gi|39645774|gb|AAH63447.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 [Homo sapiens]
Length = 867
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|67188550|ref|NP_430255.2| RNA polymerase II subunit A C-terminal domain phosphatase isoform 2
[Homo sapiens]
gi|119587035|gb|EAW66631.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1, isoform CRA_d [Homo sapiens]
Length = 867
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|393240595|gb|EJD48120.1| hypothetical protein AURDEDRAFT_85955 [Auricularia delicata
TFB-10046 SS5]
Length = 796
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++ RP L+++L A +K +E++V TM R YA ++ +DP+G + G +++L R
Sbjct: 261 IKPRPG---LQAFLEAISQK-YEMHVYTMGTRAYAEKVCAAIDPDGRMFG-RRILSRD-- 313
Query: 315 VKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS KSL +F C M ++IDDR VW+
Sbjct: 314 -ESGSLTAKSLERLFP---CDTSMVVIIDDRSDVWD 345
>gi|328792425|ref|XP_623605.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Apis mellifera]
Length = 745
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + R +L R +E+++CT R+YA + LLD +G L S ++L R C
Sbjct: 194 TRLRP---NTRHFLSEMSR-LYELHICTFGARNYAHTVAALLDKDGTLF-SHRILSRDEC 248
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
S+ + L C + +IDDR VW+
Sbjct: 249 FDPASKTANLKAL--FPCGDDLVCIIDDREDVWQ 280
>gi|242781762|ref|XP_002479866.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218720013|gb|EED19432.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 822
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R LT P R ++LRP L S+L K +E+++ TM R YA + ++
Sbjct: 198 RAFQLTDDGPGMRGCWYYIKLRPG---LESFL-QNISKLYELHIYTMGTRAYAQNIANII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ L G DR++ + N+ + KM ++IDDR VW+
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWK 300
>gi|358383388|gb|EHK21054.1| hypothetical protein TRIVIDRAFT_90991 [Trichoderma virens Gv29-8]
Length = 758
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP L+ +L A K +E++V TM R YAL + R++DP+ L G +RV+
Sbjct: 217 IKLRPG---LQEFLEAVSTK-YELHVYTMGTRAYALNIARIVDPDRKLFG-----NRVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
S + KSL +F M ++IDDR VW + VVP
Sbjct: 268 RDENGSITAKSLQRLFP---VSTDMVVIIDDRADVWPMNRPNLIKVVP 312
>gi|119587034|gb|EAW66630.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1, isoform CRA_c [Homo sapiens]
Length = 948
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|67188445|ref|NP_004706.3| RNA polymerase II subunit A C-terminal domain phosphatase isoform 1
[Homo sapiens]
gi|327478586|sp|Q9Y5B0.3|CTDP1_HUMAN RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase; AltName: Full=TFIIF-associating CTD
phosphatase
gi|119587032|gb|EAW66628.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1, isoform CRA_a [Homo sapiens]
Length = 961
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|297702856|ref|XP_002828379.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase [Pongo abelii]
Length = 962
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|346326901|gb|EGX96497.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Cordyceps
militaris CM01]
Length = 780
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP LR +L + K +E++V TM R YAL + +++DP+ L G+ RV+
Sbjct: 217 IKLRPG---LRDFL-EEVSKMYELHVYTMGTRAYALNIAKIVDPDRKLFGN-----RVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S + KSL +F M ++IDDR VW
Sbjct: 268 RDENGSITAKSLARLFP---VSTDMVVIIDDRADVW 300
>gi|168018017|ref|XP_001761543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687227|gb|EDQ73611.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1984
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 252 SVLVRLRPA-WEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLD 310
S+ +LRP W+ +AK + +E++V TM + YA EM +LLDP G L + +
Sbjct: 1559 SMWTKLRPGIWK-----FLAKASELYELHVYTMGNKAYATEMAKLLDPTGTLFAGRVISK 1613
Query: 311 RVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S K L V L ++IDD +VW
Sbjct: 1614 GDEVDGSDKSKDLDGV----LGMESAVVIIDDSSRVW 1646
>gi|328859642|gb|EGG08750.1| hypothetical protein MELLADRAFT_115868 [Melampsora larici-populina
98AG31]
Length = 736
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Query: 274 KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGS--RKSLLNVFQRGL 331
+++E++V TM R YA + R++DP L GS+ +L R +SGS +KSL +F
Sbjct: 308 EKYEMHVYTMGTRAYADAVCRIIDPTSELFGSR-VLSR---DESGSMTQKSLTRLFP--- 360
Query: 332 CHPKMAMVIDDRCKVWE 348
M ++IDDR VWE
Sbjct: 361 VDTSMVVIIDDRGDVWE 377
>gi|296222911|ref|XP_002757404.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Callithrix jacchus]
Length = 1053
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|296090640|emb|CBI41034.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
+L +LRP + ++L + K FE+Y+ TM ER YALEM +LLDPE + S +++ +
Sbjct: 3 MLTKLRPY---VHTFL-KEASKMFEMYIYTMGERSYALEMAKLLDPE-RVYFSSRVISQA 57
Query: 313 VCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
C + + L+V L +++DD VW+
Sbjct: 58 DCTQRHQKG--LDVV---LGQESAVLILDDTESVWQ 88
>gi|350413080|ref|XP_003489872.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Bombus impatiens]
Length = 751
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + +++ + +E+++CT R+YA + LLD +G L S ++L R C
Sbjct: 194 TRLRPN----TKHFLSEMSRLYELHICTFGARNYAHTVAALLDKDGTLF-SHRILSRDEC 248
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
S+ + L C + +IDDR VW+
Sbjct: 249 FDPASKTANLKAL--FPCGDDLVCIIDDREDVWQ 280
>gi|383859139|ref|XP_003705054.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like isoform 1 [Megachile rotundata]
Length = 760
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + R +L R +E+++CT R+YA + LLD +G ++ S ++L R C
Sbjct: 193 TRLRP---NTRHFLSEMSR-LYELHICTFGARNYAHTVASLLDKDG-ILFSNRILSRDEC 247
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
S+ + L C + +IDDR VW+
Sbjct: 248 FDPASKTANLKAL--FPCGDDLVCIIDDREDVWQ 279
>gi|340709144|ref|XP_003393173.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase-like [Bombus terrestris]
Length = 751
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + +++ + +E+++CT R+YA + LLD +G L S ++L R C
Sbjct: 194 TRLRPN----TKHFLSEMSRLYELHICTFGARNYAHTVAALLDKDGTLF-SHRILSRDEC 248
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
S+ + L C + +IDDR VW+
Sbjct: 249 FDPASKTANLKAL--FPCGDDLVCIIDDREDVWQ 280
>gi|256073745|ref|XP_002573189.1| rna polymerase II ctd phosphatase [Schistosoma mansoni]
gi|360045501|emb|CCD83049.1| putative rna polymerase II ctd phosphatase [Schistosoma mansoni]
Length = 1345
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP E + L + +++++CT R YA ++ ++DP+ S+++L R C
Sbjct: 190 TRLRPHLEKVLDCL----SQYYQMHICTFGNRVYAHQLASMIDPKRRYF-SQRILSRDEC 244
Query: 315 ----VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
KS + K+L F RGL + +IDDR +VW D +HV P
Sbjct: 245 FNPVTKSANLKAL---FPRGL---NLVCIIDDRGEVW-DWSSNLIHVKP 286
>gi|383859141|ref|XP_003705055.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like isoform 2 [Megachile rotundata]
Length = 759
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + R +L R +E+++CT R+YA + LLD +G L S ++L R C
Sbjct: 193 TRLRP---NTRHFLSEMSR-LYELHICTFGARNYAHTVASLLDKDGILF-SNRILSRDEC 247
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
S+ + L C + +IDDR VW+
Sbjct: 248 FDPASKTANLKAL--FPCGDDLVCIIDDREDVWQ 279
>gi|156837042|ref|XP_001642557.1| hypothetical protein Kpol_1068p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156113100|gb|EDO14699.1| hypothetical protein Kpol_1068p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 745
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V++RP L+ + + K +E+++ TMA R YA E+ +++DP+G L DR++
Sbjct: 231 VKIRPG---LKEFF-EEVSKLYEMHIYTMATRSYAQEIAKIIDPDGTLFA-----DRILS 281
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S + KSL +F M +VIDDR VW
Sbjct: 282 RNENGSLTHKSLERLFP---TDQSMVVVIDDRGDVW 314
>gi|218196729|gb|EEC79156.1| hypothetical protein OsI_19829 [Oryza sativa Indica Group]
Length = 574
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 171 EPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRP 230
E D++R A+LK + +R L+ + ++++ K+F + E ++ + V
Sbjct: 179 EIDRLRG----ADLKNLLRERKLVLILDLDHTLINSTKLFDLSAAENELGIQSAAKEV-- 232
Query: 231 VIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYAL 290
+P+R+L +L +LRP +R +L + FE+Y+ TM ++ YA+
Sbjct: 233 ---VPDRSLFTLET------MQMLTKLRPF---VRRFL-KEASDMFEMYIYTMGDKAYAI 279
Query: 291 EMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
E+ +LLDP+ GSK ++ C + + L+V L +A+++DD VW+
Sbjct: 280 EIAKLLDPDNVYFGSK-VISNSDCTQRHQKG--LDVV---LGDESVAVILDDTEYVWQ 331
>gi|403268140|ref|XP_003926140.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Saimiri boliviensis boliviensis]
Length = 937
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 198 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 252
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 253 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 284
>gi|194214772|ref|XP_001496059.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Equus caballus]
Length = 868
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 131 TRLRPHCKEF----LEKTAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 185
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 186 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 217
>gi|346975758|gb|EGY19210.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Verticillium dahliae VdLs.17]
Length = 818
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP LR +L K + +E++V TM R YAL + +++DP+ L G+ RV+
Sbjct: 221 IKMRPG---LREFL-EKVAELYELHVYTMGTRAYALNIAKIVDPQQKLFGN-----RVIS 271
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
S + KSL +F M ++IDDR VW + VVP
Sbjct: 272 RDENGSITSKSLQRLFP---VSTNMVVIIDDRADVWPRNRPNLIKVVP 316
>gi|215794709|pdb|3EF0|A Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd
Phosphatase
Length = 372
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 16/117 (13%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P + ++ RP + + K + +E+++ TM + YA E+ +++DP G L
Sbjct: 65 PSGYTSCYYIKFRPG----LAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQ- 119
Query: 306 KQLLDRVVCVK-SGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
DRV+ SGS +KSL +F C M +VIDDR VW D + + VVP
Sbjct: 120 ----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVW-DWNPNLIKVVP 168
>gi|359494894|ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Vitis vinifera]
Length = 278
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
+L +LRP + ++L + K FE+Y+ TM ER YALEM +LLDPE + S +++ +
Sbjct: 17 MLTKLRPY---VHTFL-KEASKMFEMYIYTMGERSYALEMAKLLDPE-RVYFSSRVISQA 71
Query: 313 VCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
C + + L+V L +++DD VW+
Sbjct: 72 DCTQRHQKG--LDVV---LGQESAVLILDDTESVWQ 102
>gi|83767703|dbj|BAE57842.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 820
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + FE+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVSELFELHIYTMGTRAYAQHIASII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ + N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLHRLFPVDTKMVVIIDDRGDVW 299
>gi|115463681|ref|NP_001055440.1| Os05g0390500 [Oryza sativa Japonica Group]
gi|57863785|gb|AAS86390.2| unknown protein [Oryza sativa Japonica Group]
gi|113578991|dbj|BAF17354.1| Os05g0390500 [Oryza sativa Japonica Group]
gi|215695102|dbj|BAG90293.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631469|gb|EEE63601.1| hypothetical protein OsJ_18418 [Oryza sativa Japonica Group]
Length = 536
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 171 EPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRP 230
E D++R A+LK + +R L+ + ++++ K+F + E ++ + V
Sbjct: 153 EIDRLRG----ADLKNLLRERKLVLILDLDHTLINSTKLFDLSAAENELGIQSAAKEV-- 206
Query: 231 VIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYAL 290
+P+R+L +L +LRP +R +L + FE+Y+ TM ++ YA+
Sbjct: 207 ---VPDRSLFTLET------MQMLTKLRPF---VRRFL-KEASDMFEMYIYTMGDKAYAI 253
Query: 291 EMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
E+ +LLDP+ GSK ++ C + + L+V L +A+++DD VW+
Sbjct: 254 EIAKLLDPDNVYFGSK-VISNSDCTQRHQKG--LDVV---LGDESVAVILDDTEYVWQ 305
>gi|359497210|ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Vitis vinifera]
Length = 278
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
+L +LRP + ++L + K FE+Y+ TM ER YALEM +LLDPE + S +++ +
Sbjct: 17 MLTKLRPY---VHTFL-KEASKMFEMYIYTMGERSYALEMAKLLDPE-RVYFSSRVISQA 71
Query: 313 VCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
C + + L+V L +++DD VW+
Sbjct: 72 DCTQRHQKG--LDVV---LGQESAVLILDDTESVWQ 102
>gi|405966173|gb|EKC31485.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Crassostrea gigas]
Length = 837
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
R+RP E + K +E+++CT R YA + + LDP+G S ++L R C
Sbjct: 189 TRIRPRTE----KFLENVSKLYELHICTFGSRMYAHIIAKFLDPDGKYF-SHRILSRDEC 243
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S+ + N+ C M +IDDR VW
Sbjct: 244 FNQNSK--MANLKALFPCGDSMVCIIDDREDVW 274
>gi|403217618|emb|CCK72111.1| hypothetical protein KNAG_0J00280 [Kazachstania naganishii CBS
8797]
Length = 742
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R V++RP + L FE+++ TMA R YALE+ +++DP+ L G
Sbjct: 238 PAPRKCWYYVKVRPGLKQFFKRLAP----LFEMHIYTMATRAYALEIAKIIDPDKSLFG- 292
Query: 306 KQLLDRVVCVK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ S + KSL +F M VIDDR VW
Sbjct: 293 ----DRILSRDENGSLTHKSLERLFP---TDQSMVTVIDDRGDVW 330
>gi|391867600|gb|EIT76846.1| TFIIF-interacting CTD phosphatase [Aspergillus oryzae 3.042]
Length = 820
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + FE+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVSELFELHIYTMGTRAYAQHIASII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ + N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLHRLFPVDTKMVVIIDDRGDVW 299
>gi|330799899|ref|XP_003287978.1| hypothetical protein DICPUDRAFT_55168 [Dictyostelium purpureum]
gi|325082002|gb|EGC35499.1| hypothetical protein DICPUDRAFT_55168 [Dictyostelium purpureum]
Length = 730
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++ RP D + K FE+++ TM R+YA E+ +L+DP+ L +R++
Sbjct: 185 IKKRPHLNDF----LENVNKNFELHIYTMGTRNYANEIAKLIDPDQTLFK-----ERILS 235
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
G+ + + + C M +++DDR VW+ K + + + P
Sbjct: 236 RDDGNGINFKTLQRLFPCDDSMVLIVDDRSDVWK-KSKNLIQISP 279
>gi|115396432|ref|XP_001213855.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193424|gb|EAU35124.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 820
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP E + + FE+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPGLE----TFLENVAELFELHIYTMGTRAYAQHIASII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ + N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLHRLFPVDTKMVVIIDDRGDVW 299
>gi|444518074|gb|ELV11938.1| RNA polymerase II subunit A C-terminal domain phosphatase [Tupaia
chinensis]
Length = 876
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 68 TRLRPHCKDF----LEKVAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 122
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 123 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 154
>gi|255081919|ref|XP_002508178.1| predicted protein [Micromonas sp. RCC299]
gi|226523454|gb|ACO69436.1| predicted protein [Micromonas sp. RCC299]
Length = 318
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 235 PERNLVLTRIN------PENRDTSVLVRLRPAWEDLR---SYLIAKGRKRFEVYVCTMAE 285
PER+L+ R++ PE R + RL+ W LR + + FEV+V TM
Sbjct: 5 PERSLLKFRLDHEKGLGPEGRTLHFVERLQ-IWTKLRPGVKKFLRQVASMFEVHVITMGT 63
Query: 286 RDYALEMWRLLDP-----EGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVI 340
+ YA EM +L+DP +G +IG Q +D ++ +K L GL +A+V+
Sbjct: 64 QSYADEMRQLIDPGRQHIKGSVIGLGQ-MDEFGELQPADKKRLDGELS-GL--DSIAVVL 119
Query: 341 DDRCKVWEDKDQPRVHV 357
DD VW D ++ + +
Sbjct: 120 DDHVGVWPDHEENLIEI 136
>gi|62858037|ref|NP_001017022.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 [Xenopus (Silurana) tropicalis]
Length = 570
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K FE++V T R YA + LDPE L S ++L R C
Sbjct: 221 TRLRPHCKEF----LEKIAKLFELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 275
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 276 IDPYSKTGNLRNLFP---CGDSMVCIIDDREDVWK 307
>gi|89269074|emb|CAJ81904.1| ctd (carboxy terminal domain rna polymerase 2 polypeptide a)
phosphatase subunit 1 [Xenopus (Silurana) tropicalis]
Length = 567
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K FE++V T R YA + LDPE L S ++L R C
Sbjct: 218 TRLRPHCKEF----LEKIAKLFELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 272
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 273 IDPYSKTGNLRNLFP---CGDSMVCIIDDREDVWK 304
>gi|410911388|ref|XP_003969172.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Takifugu rubripes]
Length = 905
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 217 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 271
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 272 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 303
>gi|367004465|ref|XP_003686965.1| hypothetical protein TPHA_0I00240 [Tetrapisispora phaffii CBS 4417]
gi|357525268|emb|CCE64531.1| hypothetical protein TPHA_0I00240 [Tetrapisispora phaffii CBS 4417]
Length = 732
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 13/98 (13%)
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
S V++RP ++ K +E+++ TMA R YA E+ +++DP+G L G++ +L R
Sbjct: 231 SYYVKVRPGLKEF----FEKVAPIYEMHIYTMATRAYAEEIAKIIDPDGSLFGNR-ILSR 285
Query: 312 VVCVKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
++GS KSL +F M ++IDDR VW
Sbjct: 286 ---DENGSLTHKSLERLFP---TDQSMVVIIDDRGDVW 317
>gi|238486788|ref|XP_002374632.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Aspergillus
flavus NRRL3357]
gi|220699511|gb|EED55850.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Aspergillus
flavus NRRL3357]
Length = 698
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + FE+++ TM R YA + ++
Sbjct: 76 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVSELFELHIYTMGTRAYAQHIASII 131
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ + N+ + KM ++IDDR VW
Sbjct: 132 DPDRKLFG-----DRILSRDESGSLTAKNLHRLFPVDTKMVVIIDDRGDVW 177
>gi|395830784|ref|XP_003788497.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Otolemur garnettii]
Length = 1290
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCRDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
+ S+ L N+F C M +IDDR VW K P + V + Y P N
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVW--KFAPNLITVKKYV--YFPGTGDMN 330
Query: 374 AVP 376
A P
Sbjct: 331 APP 333
>gi|441603466|ref|XP_004087808.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase [Nomascus leucogenys]
Length = 1236
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 223 TRLRPHCKDF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 277
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 278 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 309
>gi|389751366|gb|EIM92439.1| hypothetical protein STEHIDRAFT_136328 [Stereum hirsutum FP-91666
SS1]
Length = 1075
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+ RP R +L + K +E++V TM R YA E+ +DP+G G + +L R
Sbjct: 308 VKPRPG---TREFLSSVAEK-YEMHVYTMGTRAYAEEVCAAIDPDGKFFGGR-ILSRD-- 360
Query: 315 VKSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F M ++IDDR VWE
Sbjct: 361 -ESGSMTQKSLRRLFP---VDTSMVVIIDDRADVWE 392
>gi|356498756|ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Glycine max]
Length = 428
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 18/100 (18%)
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
+++ +LRP +R +L + + FE+Y+ TM +R YALEM +LLDP+G +K
Sbjct: 174 NMMTKLRPF---VRPFL-KEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAK----- 224
Query: 312 VVCVKSGSRKSLLNVFQRG----LCHPKMAMVIDDRCKVW 347
V+ G++K Q+G L +++DD W
Sbjct: 225 VISRDDGTQKH-----QKGLDVVLGQESAVLILDDTEHAW 259
>gi|47217775|emb|CAG05997.1| unnamed protein product [Tetraodon nigroviridis]
Length = 979
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 217 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 271
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 272 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 303
>gi|449447765|ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Cucumis sativus]
Length = 452
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 18/99 (18%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
+ +LRP + S+L + K FE+Y+ TM ER YA EM +LLDP+ SK V
Sbjct: 187 TMTKLRPF---VHSFL-KEASKLFEMYIYTMGERRYAFEMAKLLDPKKEYFSSK-----V 237
Query: 313 VCVKSGSRKSLLNVFQRG----LCHPKMAMVIDDRCKVW 347
+ G++K Q+G L +++DD W
Sbjct: 238 ISRDDGTQKH-----QKGLDVVLGKESAVLILDDTENAW 271
>gi|356564913|ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
4-like [Glycine max]
Length = 442
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 18/100 (18%)
Query: 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDR 311
+++ +LRP +R +L + + FE+Y+ TM +R YALEM +LLDP+G +K
Sbjct: 188 NMMTKLRPF---VRPFL-KEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAK----- 238
Query: 312 VVCVKSGSRKSLLNVFQRG----LCHPKMAMVIDDRCKVW 347
V+ G++K Q+G L +++DD W
Sbjct: 239 VISRDDGTQKH-----QKGLDVVLGQESAVIILDDTEHAW 273
>gi|291414979|ref|XP_002723734.1| PREDICTED: CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1-like [Oryctolagus
cuniculus]
Length = 940
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +D + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 204 TRLRPHCKDF----LEKIARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 258
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 259 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 290
>gi|6689545|emb|CAB65510.1| FCP1 serine phosphatase [Xenopus laevis]
Length = 867
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 159 IDPYSKTGNLRNLFP---CGDSMVCIIDDREDVWK 190
>gi|66824241|ref|XP_645475.1| hypothetical protein DDB_G0271690 [Dictyostelium discoideum AX4]
gi|60473594|gb|EAL71535.1| hypothetical protein DDB_G0271690 [Dictyostelium discoideum AX4]
Length = 782
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 274 KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSR---KSLLNVFQRG 330
K +E+++ TM R+YA E+ +L+DPE + +R++ G+ KSL +F
Sbjct: 199 KIYELHIYTMGTRNYANEIAKLIDPESSIFK-----ERILSRDDGNGINFKSLQRLFP-- 251
Query: 331 LCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
C M +++DDR VW+ K + + + P
Sbjct: 252 -CDDSMVLIVDDRSDVWK-KSKNLIQISP 278
>gi|347836062|emb|CCD50634.1| similar to FCP1-like phosphatase [Botryotinia fuckeliana]
Length = 832
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP + +AK + +E++V TM R YAL + +++DP L G DR++
Sbjct: 220 IKMRPGL----AEFLAKVSEMYELHVYTMGTRAYALNIAKIVDPGKKLFG-----DRIIS 270
Query: 315 VKSG---SRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ KSL +F + M +IDDR VW
Sbjct: 271 RDENGNVTAKSLARLFPQST---HMVAIIDDRADVW 303
>gi|334325963|ref|XP_001374906.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Monodelphis domestica]
Length = 1208
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 446 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 500
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 501 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 532
>gi|50552035|ref|XP_503492.1| YALI0E03278p [Yarrowia lipolytica]
gi|49649361|emb|CAG79071.1| YALI0E03278p [Yarrowia lipolytica CLIB122]
Length = 750
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+LRP L+ +L K +E+++ TMA R YA + ++DP+G G DR++
Sbjct: 235 VKLRPH---LKEFLEVVSEK-YELHIYTMATRAYAKAIAEIIDPDGRYFG-----DRILS 285
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+SGS +KSL +F M +IDDR VW+
Sbjct: 286 RDESGSLTQKSLQRLFP---VDTSMVAIIDDRGDVWK 319
>gi|213403530|ref|XP_002172537.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Schizosaccharomyces japonicus yFS275]
gi|212000584|gb|EEB06244.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Schizosaccharomyces japonicus yFS275]
Length = 723
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 15/79 (18%)
Query: 274 KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGL-- 331
K +E+++ TM + YA E+ +++DP+G L DRV+ SR N+ Q+ +
Sbjct: 231 KLYELHIYTMGTKAYATEVAKVIDPDGEL-----FQDRVL-----SRDDSGNLTQKSIRR 280
Query: 332 ---CHPKMAMVIDDRCKVW 347
C M +VIDDR VW
Sbjct: 281 LFPCDTSMVVVIDDRGDVW 299
>gi|148236996|ref|NP_001087852.1| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 [Xenopus laevis]
gi|51950264|gb|AAH82378.1| MGC81710 protein [Xenopus laevis]
Length = 977
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 214 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 268
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 269 IDPYSKTGNLRNLFP---CGDSMVCIIDDREDVWK 300
>gi|302889251|ref|XP_003043511.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724428|gb|EEU37798.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 765
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP + + + K +E++V TM R YAL + R++DP+ L G+ RV+
Sbjct: 216 IKLRPGL----AEFLEEISKMYELHVYTMGTRAYALNIARIVDPDKKLFGN-----RVIS 266
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S + KSL +F M ++IDDR VW
Sbjct: 267 RDENGSITSKSLQRLFP---VSTDMVVIIDDRADVW 299
>gi|400603434|gb|EJP71032.1| FCP1-like phosphatase [Beauveria bassiana ARSEF 2860]
Length = 774
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP S + + K +E++V TM R YAL + +++DP+ L G+ RV+
Sbjct: 217 IKLRPGL----SEFLEEISKMYELHVYTMGTRAYALNIAKIVDPDRKLFGN-----RVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S + KSL +F M ++IDDR VW
Sbjct: 268 RDENGSITSKSLARLFP---VSTDMVVIIDDRADVW 300
>gi|344269798|ref|XP_003406734.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase-like [Loxodonta africana]
Length = 972
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 229 TRLRPHCKEF----LEKVAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 283
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 284 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 315
>gi|212526776|ref|XP_002143545.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Talaromyces
marneffei ATCC 18224]
gi|210072943|gb|EEA27030.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Talaromyces
marneffei ATCC 18224]
Length = 829
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R LT P R ++LRP L S+L + +E+++ TM R YA + ++
Sbjct: 198 RAFQLTDDGPGMRGCWYYIKLRPG---LESFL-QNISELYELHIYTMGTRAYAQHIANII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ L G DR++ + N+ + KM ++IDDR VW+
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWK 300
>gi|168040198|ref|XP_001772582.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676137|gb|EDQ62624.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1881
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 252 SVLVRLRPA-WEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLD 310
S+ +LRP W+ +AK + +E++V TM + YA EM +LLDP G L + +
Sbjct: 1605 SMWTKLRPGIWK-----FLAKASELYELHVYTMGNKAYATEMAKLLDPTGILFSGRVISK 1659
Query: 311 RVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S K L V L ++IDD +VW
Sbjct: 1660 GDEVDGSDKSKDLDGV----LGMESAVVIIDDSSRVW 1692
>gi|148227040|ref|NP_001081726.1| FCP1 serine phosphatase [Xenopus laevis]
gi|62185667|gb|AAH92306.1| Fcp1 protein [Xenopus laevis]
Length = 979
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 216 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 270
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 271 IDPYSKTGNLRNLFP---CGDSMVCIIDDREDVWK 302
>gi|322706326|gb|EFY97907.1| RNA Polymerase II CTD phosphatase Fcp1 [Metarhizium anisopliae
ARSEF 23]
Length = 807
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP ++ + +E++V TM R YAL + R++DP+ L G+ RV+
Sbjct: 217 IKLRPGLQEFLEEIATM----YELHVYTMGTRAYALNIARIVDPDRKLFGN-----RVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
S + KSL +F M ++IDDR VW + VVP
Sbjct: 268 RDENGSITSKSLQRLFP---VSTNMVVIIDDRADVWPRNRPNLIKVVP 312
>gi|449532013|ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 4-like, partial [Cucumis sativus]
Length = 340
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 18/99 (18%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
+ +LRP + S+L + K FE+Y+ TM ER YA EM +LLDP+ SK V
Sbjct: 75 TMTKLRPF---VHSFL-KEASKLFEMYIYTMGERRYAFEMAKLLDPKKEYFSSK-----V 125
Query: 313 VCVKSGSRKSLLNVFQRG----LCHPKMAMVIDDRCKVW 347
+ G++K Q+G L +++DD W
Sbjct: 126 ISRDDGTQKH-----QKGLDVVLGKESAVLILDDTENAW 159
>gi|302404507|ref|XP_003000091.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Verticillium albo-atrum VaMs.102]
gi|261361273|gb|EEY23701.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Verticillium albo-atrum VaMs.102]
Length = 755
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP LR +L + + +E++V TM R YAL + +++DP+ L G+ RV+
Sbjct: 221 IKMRPG---LREFL-ERVAELYELHVYTMGTRAYALNIAKIVDPQQKLFGN-----RVIS 271
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
S + KSL +F M ++IDDR VW + VVP
Sbjct: 272 RDENGSITSKSLQRLFP---VSTNMVVIIDDRADVWPRNRPNLIKVVP 316
>gi|119187277|ref|XP_001244245.1| hypothetical protein CIMG_03686 [Coccidioides immitis RS]
Length = 839
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 209 VFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWED-LRSY 267
V + Q+++ P NHE V+ V R L P R ++LRP ED LRS
Sbjct: 150 VAEWQEDKTNP---NHE-AVKDV-----RAFQLVDDGPGMRGCWYYIKLRPGLEDFLRSI 200
Query: 268 LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVF 327
+E+++ TM R YA + ++DP+ + G DR++ + N+
Sbjct: 201 -----SSLYELHIYTMGTRAYAQNIANIVDPDRKIFG-----DRILSRDESGSLTAKNLQ 250
Query: 328 QRGLCHPKMAMVIDDRCKVWEDKDQ-PRVHVVPAF 361
+ KM ++IDDR VW D RVH F
Sbjct: 251 RLFPVDTKMVVIIDDRGDVWNWSDNLIRVHPYDFF 285
>gi|258563858|ref|XP_002582674.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908181|gb|EEP82582.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 897
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R+ L P R ++LRP E+ + + +E+++ TMA R YA + ++
Sbjct: 223 RSFQLIDDGPGMRGCWYYIKLRPGLEEFLKNISS----LYELHIYTMATRAYAQNIANIV 278
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ + G DR++ + N+ + KM ++IDDR VW+
Sbjct: 279 DPDRKIFG-----DRILSRDESGSLTAKNLHRLFPVDTKMVVIIDDRGDVWK 325
>gi|303317134|ref|XP_003068569.1| NLI interacting factor-like phosphatase family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108250|gb|EER26424.1| NLI interacting factor-like phosphatase family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320038484|gb|EFW20419.1| RNA Polymerase II CTD phosphatase Fcp1 [Coccidioides posadasii str.
Silveira]
Length = 868
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 209 VFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWED-LRSY 267
V + Q+++ P NHE V+ V R L P R ++LRP ED LRS
Sbjct: 179 VAEWQEDKTNP---NHE-AVKDV-----RAFQLVDDGPGMRGCWYYIKLRPGLEDFLRSI 229
Query: 268 LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVF 327
+E+++ TM R YA + ++DP+ + G DR++ + N+
Sbjct: 230 -----SSLYELHIYTMGTRAYAQNIANIVDPDRKIFG-----DRILSRDESGSLTAKNLQ 279
Query: 328 QRGLCHPKMAMVIDDRCKVWEDKDQ-PRVHVVPAF 361
+ KM ++IDDR VW D RVH F
Sbjct: 280 RLFPVDTKMVVIIDDRGDVWNWSDNLIRVHPYDFF 314
>gi|148236185|ref|NP_001090168.1| CTD phosphatase [Xenopus laevis]
gi|13487713|gb|AAK27686.1| CTD phosphatase [Xenopus laevis]
Length = 980
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 216 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 270
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 271 IDPYSKTGNLRNLFP---CGDSMVCIIDDREDVWK 302
>gi|395511850|ref|XP_003760164.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Sarcophilus harrisii]
Length = 1267
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 504 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 558
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 559 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 590
>gi|443696103|gb|ELT96883.1| hypothetical protein CAPTEDRAFT_23527, partial [Capitella teleta]
Length = 562
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+ RP E + + K +E+++CT R YA + +LLDP+G S ++L R C
Sbjct: 183 TKFRPGTEKF----LERISKLYELHICTFGVRMYAHTIAKLLDPDGKYF-SHRILSRDEC 237
Query: 315 V----KSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
K+G+ K+L C M +IDDR VW
Sbjct: 238 FNPTSKTGNLKALFP------CGDSMVCIIDDREDVW 268
>gi|348512639|ref|XP_003443850.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Oreochromis niloticus]
Length = 998
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 217 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 271
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 272 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 303
>gi|392870961|gb|EAS32809.2| FCP1-like phosphatase, phosphatase domain-containing protein
[Coccidioides immitis RS]
Length = 868
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 209 VFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWED-LRSY 267
V + Q+++ P NHE V+ V R L P R ++LRP ED LRS
Sbjct: 179 VAEWQEDKTNP---NHE-AVKDV-----RAFQLVDDGPGMRGCWYYIKLRPGLEDFLRSI 229
Query: 268 LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVF 327
+E+++ TM R YA + ++DP+ + G DR++ + N+
Sbjct: 230 -----SSLYELHIYTMGTRAYAQNIANIVDPDRKIFG-----DRILSRDESGSLTAKNLQ 279
Query: 328 QRGLCHPKMAMVIDDRCKVWEDKDQ-PRVHVVPAF 361
+ KM ++IDDR VW D RVH F
Sbjct: 280 RLFPVDTKMVVIIDDRGDVWNWSDNLIRVHPYDFF 314
>gi|345324709|ref|XP_001509122.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Ornithorhynchus anatinus]
Length = 1168
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 229 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 283
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 284 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 315
>gi|402080254|gb|EJT75399.1| RNA polymerase II subunit A domain phosphatase [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 850
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP D + K +E++V TM R YA+ + +++DP+ L G +RV+
Sbjct: 228 IKMRPGLVDF----LEKIATMYELHVYTMGTRAYAMNIAKIVDPDQKLFG-----NRVIS 278
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
S + KSL +F +M ++IDDR VW + VVP
Sbjct: 279 RDENGSMTAKSLQRLFP---VSTRMVVIIDDRADVWPRNRPNLIKVVP 323
>gi|321460734|gb|EFX71774.1| hypothetical protein DAPPUDRAFT_308742 [Daphnia pulex]
Length = 798
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP L+ +E+++CT R YA + LD +G S ++L R C
Sbjct: 198 TRLRP----FTKELLCSMSSLYELHICTFGSRTYAHMIANFLDEKGRYF-SHRILSRDEC 252
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ + L C +M ++IDDR VW
Sbjct: 253 FSAHSKTANLKAL--FPCGDQMVVIIDDREDVW 283
>gi|119491655|ref|XP_001263322.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Neosartorya
fischeri NRRL 181]
gi|119411482|gb|EAW21425.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Neosartorya
fischeri NRRL 181]
Length = 824
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + FE+++ TM R YA + ++
Sbjct: 198 RAFQLVDEGPGMRGCWYYVKLRPG---LESFL-QNVSELFELHIYTMGTRAYAQHIAGII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ + N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVW 299
>gi|367047187|ref|XP_003653973.1| hypothetical protein THITE_2116513 [Thielavia terrestris NRRL 8126]
gi|347001236|gb|AEO67637.1| hypothetical protein THITE_2116513 [Thielavia terrestris NRRL 8126]
Length = 909
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 19/104 (18%)
Query: 249 RDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQL 308
R S +++RP E+ + + + +E++V TM R YA + R++DP+ L G
Sbjct: 214 RRCSYYIKMRPGLEEF----LKRISELYEMHVYTMGTRAYAQNVARVVDPQRKLFG---- 265
Query: 309 LDRVVCVKSGSRKSLLNVFQRGL-----CHPKMAMVIDDRCKVW 347
+RV+ SR N+F + L M ++IDDR VW
Sbjct: 266 -NRVI-----SRDENGNMFAKSLGRLFPVSTNMVVIIDDRSDVW 303
>gi|308464266|ref|XP_003094401.1| hypothetical protein CRE_07009 [Caenorhabditis remanei]
gi|308247823|gb|EFO91775.1| hypothetical protein CRE_07009 [Caenorhabditis remanei]
Length = 754
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 236 ERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRL 295
E++ +T+ N +R +LRP + + K +E+++ T ER YAL + ++
Sbjct: 263 EKHKDITKYNLHSR--VYTTKLRPH----TTEFLNKMSAMYEMHIVTFGERKYALRIAKI 316
Query: 296 LDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
LDP+ L G +++L R + + +F C + ++IDDR VW+
Sbjct: 317 LDPDARLFG-QRILSRNELSSAQHKTENKALFP---CGDNLVVIIDDRADVWQ 365
>gi|310791724|gb|EFQ27251.1| FCP1-like phosphatase [Glomerella graminicola M1.001]
Length = 860
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP + + K + +E++V TM R YAL + +++DP L G +RV+
Sbjct: 222 IKMRPGL----AEFLEKVAELYELHVYTMGTRAYALNIAKIVDPHQKLFG-----NRVIS 272
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
++GS KSL +F + M ++IDDR VW + + VVP
Sbjct: 273 RDENGSMISKSLQRLFP---VNTNMVVIIDDRADVWPNNRPNLIKVVP 317
>gi|159127495|gb|EDP52610.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Aspergillus
fumigatus A1163]
Length = 827
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + FE+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVSELFELHIYTMGTRAYAQHIAGII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ + N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVW 299
>gi|70999518|ref|XP_754478.1| RNA Polymerase II CTD phosphatase Fcp1 [Aspergillus fumigatus
Af293]
gi|66852115|gb|EAL92440.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Aspergillus
fumigatus Af293]
Length = 827
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + FE+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVSELFELHIYTMGTRAYAQHIAGII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ + N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVW 299
>gi|224142401|ref|XP_002324547.1| predicted protein [Populus trichocarpa]
gi|222865981|gb|EEF03112.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
++ +LRP +R++L + + FE+Y+ TM +R YALEM +LLDP G + +V
Sbjct: 7 MMTKLRPF---VRTFL-KEASQMFEMYIYTMGDRAYALEMAKLLDP-----GREYFNAKV 57
Query: 313 VCVKSGSRKSLLNVFQRG----LCHPKMAMVIDDRCKVW-EDKD----QPRVHVVPAFTP 363
+ G+++ Q+G L +++DD W + KD R H +
Sbjct: 58 ISRDDGTQRH-----QKGLDVVLGQESAVLILDDTENAWMKHKDNLILMERYHFFASSCH 112
Query: 364 YYA--------PQAETANAVPVLCVARNVACNVRGCFFKEFDENL 400
+ + + + + L V + FF+E +EN+
Sbjct: 113 QFGFNCKSLSEQKTDESESEGALASILKVLRKIHQIFFEELEENM 157
>gi|121705758|ref|XP_001271142.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Aspergillus
clavatus NRRL 1]
gi|119399288|gb|EAW09716.1| RNA Polymerase II CTD phosphatase Fcp1, putative [Aspergillus
clavatus NRRL 1]
Length = 826
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + FE+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVAELFELHIYTMGTRAYAQHIAAII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ + N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVW 299
>gi|302391792|ref|YP_003827612.1| RNAse III [Acetohalobium arabaticum DSM 5501]
gi|302203869|gb|ADL12547.1| RNAse III [Acetohalobium arabaticum DSM 5501]
Length = 234
Score = 45.4 bits (106), Expect = 0.13, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 631 LQE-IGKRCSSKVEFRSVVSTSKD--LQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
LQE I KR +++ E+ + D +F+VEV F +G G G ++K+AQQQAA+NAL
Sbjct: 171 LQEMIQKRSNARPEYYVIEEKGPDHSKEFTVEVKFNDRSLGEGTGSSKKEAQQQAAKNAL 230
Query: 688 HYL 690
L
Sbjct: 231 KKL 233
>gi|378731871|gb|EHY58330.1| protein phosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 856
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R+ L P R ++LRP + ++ + +E+++ TM R YA ++ ++
Sbjct: 199 RSFQLIDDGPGMRGCWYYIKLRPGLTEFLEHI----SQLYEMHIYTMGTRQYAQQIAAIV 254
Query: 297 DPEGHLIGSKQLLDRVVCV-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DPE G DR++ +SGS K+L +F KM ++IDDR VW+
Sbjct: 255 DPERKFFG-----DRILSRDESGSMVAKNLERLFP---VDTKMVVIIDDRGDVWK 301
>gi|170036997|ref|XP_001846347.1| RNA polymerase II subunit A C-terminal domain phosphatase [Culex
quinquefasciatus]
gi|167879975|gb|EDS43358.1| RNA polymerase II subunit A C-terminal domain phosphatase [Culex
quinquefasciatus]
Length = 764
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP +AK +E+++CT R+YA + + LD +G S ++L R C
Sbjct: 185 TRLRPG----ALQFLAKMDPFYELHICTFGARNYAHMIAQFLDEKGRYF-SHRILSRDEC 239
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ S+ L C M +IDDR VW
Sbjct: 240 FNATSKTDNLKAL--FPCGDSMVCIIDDREDVW 270
>gi|325087549|gb|EGC40859.1| RNA polymerase II C-terminal domain phosphatase component
[Ajellomyces capsulatus H88]
Length = 885
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP E+ + FE+++ TM R YA + ++DP+ + G DR++
Sbjct: 187 IKLRPGLEEFLRNI----STLFELHIYTMGTRAYAQHIASIVDPDRKIFG-----DRILS 237
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
+ N+ + KM ++IDDR VW+ D + VVP
Sbjct: 238 RDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWKWTDN-LIKVVP 281
>gi|291001899|ref|XP_002683516.1| TFIIF CTD phosphatase Fcp1 [Naegleria gruberi]
gi|284097145|gb|EFC50772.1| TFIIF CTD phosphatase Fcp1 [Naegleria gruberi]
Length = 592
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 249 RDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQL 308
R + V+ RP E + + + FE++V T ER YA ++ ++LD L + +
Sbjct: 240 RGSYHFVKFRPRLESF----LKRCSEIFELHVFTHGERAYADQIGKMLDSSKSLFADR-I 294
Query: 309 LDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP--AFTPYYA 366
L R C + K+L VF K +VIDD+ VW+D + + P F +
Sbjct: 295 LSRDECPDINT-KTLSQVFPYS---DKSVLVIDDKTDVWKDNVDNVIQIAPYDYFRRIFG 350
Query: 367 PQAETANA 374
Q + NA
Sbjct: 351 VQLDVNNA 358
>gi|407929624|gb|EKG22436.1| BRCT domain-containing protein [Macrophomina phaseolina MS6]
Length = 861
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P R ++LRP LR +L K +E+++ TM R YA + +++DP + G
Sbjct: 208 PGGRGCWYYIKLRPG---LREFL-ENISKVYELHIYTMGTRAYAQNIAKIVDPNRKIFG- 262
Query: 306 KQLLDRVVCV-KSGSR--KSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ +SGS K+L +F KM ++IDDR VW
Sbjct: 263 ----DRILSRDESGSLTVKTLHRIFP---VDTKMVVIIDDRGDVW 300
>gi|308500103|ref|XP_003112237.1| CRE-FCP-1 protein [Caenorhabditis remanei]
gi|308268718|gb|EFP12671.1| CRE-FCP-1 protein [Caenorhabditis remanei]
Length = 664
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 229 RPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDY 288
+P+ E++ +T+ N +R +LRP + + + A +E+++ T +R Y
Sbjct: 160 KPMSADAEKHKDITKYNLHSR--VYTTKLRPHTTEFLNKMAA----MYEMHIVTYGQRQY 213
Query: 289 ALEMWRLLDPEGHLIGSKQL-LDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
A + ++LDP+ L G + L D + + +R +L +F C + ++IDDR VW
Sbjct: 214 AHRIAQILDPDARLFGQRILSRDELFSAQHKTR-NLKALFP---CGDNLVVIIDDRADVW 269
Query: 348 E 348
+
Sbjct: 270 Q 270
>gi|429728361|ref|ZP_19263087.1| ribonuclease III [Peptostreptococcus anaerobius VPI 4330]
gi|429149860|gb|EKX92822.1| ribonuclease III [Peptostreptococcus anaerobius VPI 4330]
Length = 236
Score = 45.1 bits (105), Expect = 0.14, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 601 SQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQ--FSV 658
++ + N R+ + + N+ Y +I LQE+ + + ++ +R V D F +
Sbjct: 143 AKEFIMYNLRDVIAKTIDGNIFRDYKTI--LQEVIQSKNGRISYRLVQEKGPDHDKVFEM 200
Query: 659 EVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692
EV + +G G+GK +KDA+++AA+NAL + E
Sbjct: 201 EVRSGNKVLGFGLGKNKKDAEKEAAKNALENMGE 234
>gi|413926391|gb|AFW66323.1| hypothetical protein ZEAMMB73_651615 [Zea mays]
Length = 380
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 396 FDENLLRSISEVFYEDEAVNLPAAPDVSNYLMSEDAN-----FAPNGST 439
FDENLLR + E++YE+ ++L APDV +YL+ E+ + F GST
Sbjct: 73 FDENLLRKVFELYYENGLLDLSYAPDVGDYLVCEEEHCRTWFFIRRGST 121
>gi|398396164|ref|XP_003851540.1| hypothetical protein MYCGRDRAFT_44229 [Zymoseptoria tritici IPO323]
gi|339471420|gb|EGP86516.1| hypothetical protein MYCGRDRAFT_44229 [Zymoseptoria tritici IPO323]
Length = 822
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 251 TSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLD 310
T V+LRP +D + + +E+++ TM R YA + +++DP+ + G D
Sbjct: 214 TWYYVKLRPGLKDF----LRDMSELYELHIYTMGTRAYADNIAKIVDPDRKVFG-----D 264
Query: 311 RVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
R++ ++ N+ + +M ++IDDR VW
Sbjct: 265 RILSRDENGSMTVKNLKRLFHADTRMVVIIDDRADVW 301
>gi|332029822|gb|EGI69691.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Acromyrmex echinatior]
Length = 749
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + R +L R +E+++CT R YA + LLD +G L S ++L R C
Sbjct: 196 TRLRP---NTRHFLSEMSR-LYELHICTFGARIYAHTVASLLDKDGVLF-SHRILSRDEC 250
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
S+ + L C + +IDDR VW+
Sbjct: 251 FDPASKTANLKAL--FPCGDDLVCIIDDREDVWQ 282
>gi|350634686|gb|EHA23048.1| hypothetical protein ASPNIDRAFT_197473 [Aspergillus niger ATCC
1015]
Length = 824
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + +E+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVSEMYELHIYTMGTRSYAQHIASII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLVAKNLHRLFPVDTKMVVIIDDRGDVW 299
>gi|15239576|ref|NP_200232.1| haloacid dehalogenase-like hydrolase domain-containing protein
[Arabidopsis thaliana]
gi|9759494|dbj|BAB10744.1| unnamed protein product [Arabidopsis thaliana]
gi|332009084|gb|AED96467.1| haloacid dehalogenase-like hydrolase domain-containing protein
[Arabidopsis thaliana]
Length = 306
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 251 TSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLD 310
+ L++LRP + + + K F +YV TM +RDYA+ + L+DPE G D
Sbjct: 134 SEFLIKLRPFVHEF----LKEANKMFSMYVYTMGDRDYAMNVLNLIDPEKVYFG-----D 184
Query: 311 RVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWED 349
RV+ L++ C +++DD VW D
Sbjct: 185 RVITRNESPYIKTLDLVLADECG---VVIVDDTPHVWPD 220
>gi|358372260|dbj|GAA88864.1| RNA Polymerase II CTD phosphatase Fcp1 [Aspergillus kawachii IFO
4308]
Length = 825
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + +E+++ TM R YA + ++
Sbjct: 198 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVSEMYELHIYTMGTRSYAQHIASII 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ N+ + KM ++IDDR VW
Sbjct: 254 DPDRKLFG-----DRILSRDESGSLVAKNLHRLFPVDTKMVVIIDDRGDVW 299
>gi|402467220|gb|EJW02558.1| FCP1-like phosphatase, phosphatase domain-containing protein
[Edhazardia aedis USNM 41457]
Length = 905
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+ LRP E L S +++E+++ TM YA ++ +++DP G + G++ +
Sbjct: 240 IALRPFLEKLLSL-----DEKYEMHIYTMGNNQYAQKVKKIIDPTGTIFGNR------II 288
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ + + L R + +VIDDR VW
Sbjct: 289 TRDENNQELFKSLDRFSTNHDNIVVIDDRIDVW 321
>gi|358253094|dbj|GAA51983.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Clonorchis sinensis]
Length = 1535
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 274 KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLN-VFQRGLC 332
K +++++CT R YA ++ ++DP+ S ++L R C ++ + L +F RGL
Sbjct: 241 KYYQMHICTFGNRMYAHQLAGMIDPKRRYF-SHRILSRDECFNPVTKSANLKALFPRGL- 298
Query: 333 HPKMAMVIDDRCKVWE 348
+ +IDDR +VWE
Sbjct: 299 --NLVCIIDDRGEVWE 312
>gi|449493392|ref|XP_002190004.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Taeniopygia guttata]
Length = 871
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L ++F C M +IDDR VW+
Sbjct: 159 IDPFSKTGNLRDLFP---CGDSMVCIIDDREDVWK 190
>gi|326916917|ref|XP_003204751.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Meleagris gallopavo]
Length = 1003
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 234 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 288
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L ++F C M +IDDR VW+
Sbjct: 289 IDPFSKTGNLRDLFP---CGDSMVCIIDDREDVWK 320
>gi|317144011|ref|XP_001819844.2| RNA polymerase II subunit A C-terminal domain phosphatase
[Aspergillus oryzae RIB40]
Length = 799
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 245 NPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIG 304
+ +N + L LRP L S+L + FE+++ TM R YA + ++DP+ L G
Sbjct: 185 DKDNPNHQALSDLRPG---LESFL-QNVSELFELHIYTMGTRAYAQHIASIIDPDRKLFG 240
Query: 305 SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DR++ + N+ + KM ++IDDR VW
Sbjct: 241 -----DRILSRDESGSLTAKNLHRLFPVDTKMVVIIDDRGDVW 278
>gi|225556539|gb|EEH04827.1| RNA polymerase II C-terminal domain phosphatase component
[Ajellomyces capsulatus G186AR]
Length = 871
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP E+ + FE+++ TM R YA + ++DP+ + G DR++
Sbjct: 187 IKLRPGLEEFLRNI----STLFELHIYTMGTRAYAQHIASIVDPDRKIFG-----DRILS 237
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
+ N+ + KM ++IDDR VW+ D + VVP
Sbjct: 238 RDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWKWTDN-LIKVVP 281
>gi|156050785|ref|XP_001591354.1| hypothetical protein SS1G_07980 [Sclerotinia sclerotiorum 1980]
gi|154692380|gb|EDN92118.1| hypothetical protein SS1G_07980 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 806
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP + + K + +E++V TM R YAL + +++DP L G DR++
Sbjct: 220 IKMRPGL----AEFLTKISEMYELHVYTMGTRAYALSIAKIVDPGKKLFG-----DRIIS 270
Query: 315 VKSG---SRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ KSL +F + M +IDDR VW
Sbjct: 271 RDENGNVTAKSLARLFPQST---HMVAIIDDRADVW 303
>gi|134056779|emb|CAK37687.1| unnamed protein product [Aspergillus niger]
Length = 788
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R V+LRP L S+L + +E+++ TM R YA + ++
Sbjct: 162 RAFQLVDDGPGMRGCWYYVKLRPG---LESFL-QNVSEMYELHIYTMGTRSYAQHIASII 217
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
DP+ L G DR++ N+ + KM ++IDDR VW
Sbjct: 218 DPDRKLFG-----DRILSRDESGSLVAKNLHRLFPVDTKMVVIIDDRGDVW 263
>gi|46126951|ref|XP_388029.1| hypothetical protein FG07853.1 [Gibberella zeae PH-1]
Length = 765
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP L +L + K +E++V TM R YAL + +++DP+ L G+ RV+
Sbjct: 217 IKLRPG---LMEFL-EEVSKMYELHVYTMGTRAYALNIAKIVDPDKKLFGN-----RVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S + KSL +F M ++IDDR VW
Sbjct: 268 RDENGSITSKSLQRLFP---VSTDMVVIIDDRADVW 300
>gi|390356058|ref|XP_788296.3| PREDICTED: CTD small phosphatase-like protein 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 485
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
++ + V VR RP + D + + K FE+ + T ++R YA ++ LLDPE L+ +
Sbjct: 337 QDNEYQVYVRTRPFFRDF----LERMSKIFEIILFTASKRVYADKLLNLLDPEKKLVRHR 392
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDD 342
+ +CV+ K LN+ R L ++ID+
Sbjct: 393 LFREHCICVQGNYIKD-LNILGRDLTK---TVIIDN 424
>gi|432105445|gb|ELK31660.1| RNA polymerase II subunit A C-terminal domain phosphatase [Myotis
davidii]
Length = 823
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRLRPHCREF----LEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 190
>gi|367032510|ref|XP_003665538.1| hypothetical protein MYCTH_2309412 [Myceliophthora thermophila ATCC
42464]
gi|347012809|gb|AEO60293.1| hypothetical protein MYCTH_2309412 [Myceliophthora thermophila ATCC
42464]
Length = 913
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 19/98 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP +D + + + +E++V TM R YA + R++DP+ L G +RV+
Sbjct: 220 IKMRPGLQDF----LKRIAEMYELHVYTMGTRAYAQNVARVVDPDKKLFG-----NRVI- 269
Query: 315 VKSGSRKSLLNVFQRGL-----CHPKMAMVIDDRCKVW 347
SR N+F + L M +IDDR VW
Sbjct: 270 ----SRDENGNIFAKSLHRLFPVSTHMVAIIDDRSDVW 303
>gi|452840538|gb|EME42476.1| hypothetical protein DOTSEDRAFT_73343 [Dothistroma septosporum
NZE10]
Length = 855
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 219 PPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEV 278
P + NHE V+ V + L P T ++LRP L+ +L + +E+
Sbjct: 189 PTNPNHE-AVKDVCKFQ-----LADDAPGRPGTWYYIKLRPG---LKEFLTTMS-QYYEM 238
Query: 279 YVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAM 338
++ TM R YA + +++DP+ + G DR++ N+ + KM +
Sbjct: 239 HIYTMGTRAYAENIAKIIDPDRSVFG-----DRILSRDESGSMQAKNLKRLFPVDTKMVV 293
Query: 339 VIDDRCKVW 347
+IDDR VW
Sbjct: 294 IIDDRADVW 302
>gi|408390401|gb|EKJ69801.1| hypothetical protein FPSE_10001 [Fusarium pseudograminearum CS3096]
Length = 765
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP L +L + K +E++V TM R YAL + +++DP+ L G+ RV+
Sbjct: 217 IKLRPG---LMEFL-EEVSKMYELHVYTMGTRAYALNIAKIVDPDKKLFGN-----RVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S + KSL +F M ++IDDR VW
Sbjct: 268 RDENGSITSKSLQRLFP---VSTDMVVIIDDRADVW 300
>gi|363730338|ref|XP_418905.3| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase [Gallus gallus]
Length = 958
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 188 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 242
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L ++F C M +IDDR VW+
Sbjct: 243 IDPFSKTGNLRDLFP---CGDSMVCIIDDREDVWK 274
>gi|429854785|gb|ELA29772.1| RNA polymerase ii ctd phosphatase [Colletotrichum gloeosporioides
Nara gc5]
Length = 829
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP L+ +L K + +E++V TM R YA+ + +++DP+ L G +RV+
Sbjct: 222 IKMRPG---LKEFL-EKISELYELHVYTMGTRAYAMNIAQIVDPDRKLFG-----NRVIS 272
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
++GS KSL +F + M ++IDDR VW + VVP
Sbjct: 273 RDENGSMISKSLQRLFP---VNTNMVVIIDDRADVWPRNRPNLIKVVP 317
>gi|289423974|ref|ZP_06425766.1| ribonuclease III [Peptostreptococcus anaerobius 653-L]
gi|289155610|gb|EFD04283.1| ribonuclease III [Peptostreptococcus anaerobius 653-L]
Length = 236
Score = 44.7 bits (104), Expect = 0.19, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 601 SQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQ--FSV 658
++ + N R+ + + N+ Y +I LQE+ + + ++ +R V D F +
Sbjct: 143 AKEFIMYNLRDVIAKTIDGNIFRDYKTI--LQEVIQSKNGRISYRLVQEKGPDHDKVFEM 200
Query: 659 EVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692
EV + +G G+GK +KDA+++AA+NAL + E
Sbjct: 201 EVRSGNKVLGFGVGKNKKDAEKEAAKNALENMGE 234
>gi|239606973|gb|EEQ83960.1| RNA Polymerase II CTD phosphatase Fcp1 [Ajellomyces dermatitidis
ER-3]
Length = 901
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 209 VFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYL 268
V + QQ++ P NHE V+ V R L P R ++LRP E+
Sbjct: 150 VAEWQQDKDNP---NHE-AVKDV-----RAFQLVDDGPGMRGCWYYIKLRPGLEEF---- 196
Query: 269 IAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQ 328
+ + FE+++ TM R YA + ++DP+ + G DR++ + N+ +
Sbjct: 197 LREISTLFELHIYTMGTRAYAQHIANIVDPDRKIFG-----DRILSRDESGSLTAKNLQR 251
Query: 329 RGLCHPKMAMVIDDRCKVWEDKD 351
KM ++IDDR VW+ D
Sbjct: 252 LFPVDTKMVVIIDDRGDVWKWTD 274
>gi|390356060|ref|XP_003728694.1| PREDICTED: CTD small phosphatase-like protein 2-like isoform 1
[Strongylocentrotus purpuratus]
Length = 514
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 247 ENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSK 306
++ + V VR RP + D + + K FE+ + T ++R YA ++ LLDPE L+ +
Sbjct: 366 QDNEYQVYVRTRPFFRDF----LERMSKIFEIILFTASKRVYADKLLNLLDPEKKLVRHR 421
Query: 307 QLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDD 342
+ +CV+ K LN+ R L ++ID+
Sbjct: 422 LFREHCICVQGNYIKD-LNILGRDLTK---TVIIDN 453
>gi|327358124|gb|EGE86981.1| RNA Polymerase II CTD phosphatase Fcp1 [Ajellomyces dermatitidis
ATCC 18188]
Length = 839
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 209 VFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYL 268
V + QQ++ P NHE V+ V R L P R ++LRP E+
Sbjct: 78 VAEWQQDKDNP---NHE-AVKDV-----RAFQLVDDGPGMRGCWYYIKLRPGLEEF---- 124
Query: 269 IAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQ 328
+ + FE+++ TM R YA + ++DP+ + G DR++ + N+ +
Sbjct: 125 LREISTLFELHIYTMGTRAYAQHIANIVDPDRKIFG-----DRILSRDESGSLTAKNLQR 179
Query: 329 RGLCHPKMAMVIDDRCKVWEDKD 351
KM ++IDDR VW+ D
Sbjct: 180 LFPVDTKMVVIIDDRGDVWKWTD 202
>gi|261194090|ref|XP_002623450.1| RNA Polymerase II CTD phosphatase Fcp1 [Ajellomyces dermatitidis
SLH14081]
gi|239588464|gb|EEQ71107.1| RNA Polymerase II CTD phosphatase Fcp1 [Ajellomyces dermatitidis
SLH14081]
Length = 901
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 209 VFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYL 268
V + QQ++ P NHE V+ V R L P R ++LRP E+
Sbjct: 150 VAEWQQDKDNP---NHE-AVKDV-----RAFQLVDDGPGMRGCWYYIKLRPGLEEF---- 196
Query: 269 IAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQ 328
+ + FE+++ TM R YA + ++DP+ + G DR++ + N+ +
Sbjct: 197 LREISTLFELHIYTMGTRAYAQHIANIVDPDRKIFG-----DRILSRDESGSLTAKNLQR 251
Query: 329 RGLCHPKMAMVIDDRCKVWEDKD 351
KM ++IDDR VW+ D
Sbjct: 252 LFPVDTKMVVIIDDRGDVWKWTD 274
>gi|442804615|ref|YP_007372764.1| ribonuclease 3 [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442740465|gb|AGC68154.1| ribonuclease 3 [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 239
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 632 QEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH 688
+E+ K +S +++ + T D F+V VL GE++G G GKT+K+A+Q+AA +AL+
Sbjct: 172 EEVQKSSNSNIKYIVISETGPDHDKVFTVAVLVNGEQMGQGTGKTKKEAEQKAAGDALN 230
>gi|405122085|gb|AFR96852.1| hypothetical protein CNAG_04120 [Cryptococcus neoformans var.
grubii H99]
Length = 921
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335
+E++V TM R YA + +++DP+G + G + +L R S S K+L +F
Sbjct: 305 YEMHVYTMGTRTYADAIVKVIDPDGKIFGGR-ILSRDES-GSFSSKNLKRLFP---TDTS 359
Query: 336 MAMVIDDRCKVWED 349
M +VIDDR VW D
Sbjct: 360 MVVVIDDRSDVWGD 373
>gi|358418617|ref|XP_003583993.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Bos taurus]
Length = 864
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 220 TRLRPHCKEF----LEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 274
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 275 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 306
>gi|417412899|gb|JAA52807.1| Putative rna polymerase ii subunit a c-terminal domain phosphatase,
partial [Desmodus rotundus]
Length = 845
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP R +L K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 117 TRLRP---HCRQFL-EKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 171
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 172 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 203
>gi|218196728|gb|EEC79155.1| hypothetical protein OsI_19828 [Oryza sativa Indica Group]
Length = 430
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
+L +LRP +R +L + FE+Y+ TM ++ YA+E+ +LLDP+ GSK ++
Sbjct: 3 MLTKLRPF---VRRFL-KEASDMFEMYIYTMGDKAYAIEIAKLLDPDNVYFGSK-VISNS 57
Query: 313 VCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
C + + L+V L +A+++DD VW+
Sbjct: 58 DCTQRHQKG--LDVV---LGDESVAVILDDTEYVWQ 88
>gi|342878347|gb|EGU79693.1| hypothetical protein FOXB_09806 [Fusarium oxysporum Fo5176]
Length = 769
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP L +L + K +E++V TM R YAL + +++DP+ L G+ RV+
Sbjct: 217 IKLRPG---LMEFL-DEVSKMYELHVYTMGTRAYALNIAKIVDPDQKLFGN-----RVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S + KSL +F M ++IDDR VW
Sbjct: 268 RDENGSITAKSLQRLFP---VSTDMVVIIDDRADVW 300
>gi|351699228|gb|EHB02147.1| CTD small phosphatase-like protein 2 [Heterocephalus glaber]
Length = 465
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
V VRLRP + + + + K +E+ V T A++ YA ++ +LDP+ L+ + +
Sbjct: 323 VYVRLRPFFREF----LERMSKMYEIIVFTAAKKVYAEKLLNILDPKKQLVRHRLFQEHC 378
Query: 313 VCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
VCV+ K LN+ R L ++ID+ + +
Sbjct: 379 VCVQGNYIKD-LNILGRDLSK---TIIIDNSPQAF 409
>gi|163790810|ref|ZP_02185235.1| Ribonuclease (RNase III) [Carnobacterium sp. AT7]
gi|159873878|gb|EDP67957.1| Ribonuclease (RNase III) [Carnobacterium sp. AT7]
Length = 231
Score = 44.3 bits (103), Expect = 0.25, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 656 FSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693
F VEVL G+ +G G GKT+K A+Q AAENAL L EK
Sbjct: 194 FVVEVLAEGQLLGQGQGKTKKAAEQVAAENALLTLQEK 231
>gi|154284394|ref|XP_001542992.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150406633|gb|EDN02174.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 654
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP E+ + FE+++ TM R YA + ++DP+ + G DR++
Sbjct: 142 IKLRPGLEEFLRNI----STLFELHIYTMGTRAYAQHIASIVDPDRKIFG-----DRILS 192
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
+ N+ + KM ++IDDR VW+ D + VVP
Sbjct: 193 RDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWKWTDN-LIKVVP 236
>gi|301623726|ref|XP_002941162.1| PREDICTED: CTD small phosphatase-like protein 2-A-like [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
V V+LRP + L K +E++V T A+++YA ++ LLDP+ LI + D+
Sbjct: 212 VYVKLRPHAMEFLETLC----KVYEIFVFTTAKKEYAEKILDLLDPQKKLIRHRLFQDQC 267
Query: 313 VCVKSGSRKSLLNVFQRGL 331
+CV+ K L + QR L
Sbjct: 268 LCVEGHYVKD-LGILQRDL 285
>gi|328957311|ref|YP_004374697.1| ribonuclease III [Carnobacterium sp. 17-4]
gi|328673635|gb|AEB29681.1| ribonuclease III [Carnobacterium sp. 17-4]
Length = 245
Score = 44.3 bits (103), Expect = 0.27, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 656 FSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693
F VEVL G+ +G G GKT+K A+Q AAENAL L EK
Sbjct: 208 FVVEVLAEGQVLGQGQGKTKKAAEQVAAENALLALQEK 245
>gi|321262398|ref|XP_003195918.1| carboxy-terminal domain (CTD) phosphatase; Fcp1p [Cryptococcus
gattii WM276]
gi|317462392|gb|ADV24131.1| Carboxy-terminal domain (CTD) phosphatase, putative; Fcp1p
[Cryptococcus gattii WM276]
Length = 952
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335
+E++V TM R YA + +++DP+G + G + +L R S S K+L +F
Sbjct: 326 YEMHVYTMGTRTYADAIVKVIDPDGKIFGGR-ILSRDES-GSFSSKNLKRLFP---TDTS 380
Query: 336 MAMVIDDRCKVWED 349
M +VIDDR VW D
Sbjct: 381 MVVVIDDRSDVWGD 394
>gi|426253911|ref|XP_004020634.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase, partial [Ovis aries]
Length = 820
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 132 TRLRPHCKEF----LEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 186
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 187 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 218
>gi|380472901|emb|CCF46552.1| FCP1-like phosphatase, partial [Colletotrichum higginsianum]
Length = 740
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP + + + + +E++V TM R YAL + +++DP+ L G +RV+
Sbjct: 222 IKMRPGL----AEFLERVAELYELHVYTMGTRAYALNIAKIVDPQQKLFG-----NRVIS 272
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
++GS KSL +F + M ++IDDR VW + VVP
Sbjct: 273 RDENGSMISKSLQRLFP---VNTNMVVIIDDRADVWPSNRPNLIKVVP 317
>gi|171680434|ref|XP_001905162.1| hypothetical protein [Podospora anserina S mat+]
gi|170939844|emb|CAP65069.1| unnamed protein product [Podospora anserina S mat+]
Length = 835
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP E + + +E++V TM R YA + R++DPE L G +RV+
Sbjct: 222 IKMRPGLEGF----LKRISTMYELHVYTMGTRAYAQNVARVIDPEKKLFG-----NRVI- 271
Query: 315 VKSGSRKSLLNVFQRGL-----CHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
SR N++ + L M ++IDDR VW V V P
Sbjct: 272 ----SRDENGNMYSKSLQRLFPVSTNMVVIIDDRSDVWPHNRPNLVKVTP 317
>gi|307244287|ref|ZP_07526402.1| ribonuclease III [Peptostreptococcus stomatis DSM 17678]
gi|306492437|gb|EFM64475.1| ribonuclease III [Peptostreptococcus stomatis DSM 17678]
Length = 235
Score = 44.3 bits (103), Expect = 0.29, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 601 SQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKD--LQFSV 658
+++ + SN R+ + + N+ Y +I LQEI + + K+ ++ V + D +F +
Sbjct: 143 AKDFILSNLRDTIAKNIDGNIFRDYKTI--LQEIIQGNNGKISYKLVGESGPDHNKEFEM 200
Query: 659 EVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692
+V + IG+G GK +K+A+++AA +AL + E
Sbjct: 201 QVKCGQDTIGIGKGKNKKEAEKEAARDALVKMGE 234
>gi|384501479|gb|EIE91970.1| hypothetical protein RO3G_16681 [Rhizopus delemar RA 99-880]
Length = 494
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQL-LDRVV 313
++LRP L +L + + +E+++ TM +DYA + + +DPEG L + L D
Sbjct: 73 IKLRPG---LIEFL-KEIEELYELHIYTMGTKDYAKAVAKEIDPEGCLFKERILSRDESG 128
Query: 314 CVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
C+ ++K L +F C M +V+DDR VW
Sbjct: 129 CL---TQKKLQRIFP---CDTSMVVVLDDRSDVW 156
>gi|150390513|ref|YP_001320562.1| ribonuclease III [Alkaliphilus metalliredigens QYMF]
gi|149950375|gb|ABR48903.1| Ribonuclease III [Alkaliphilus metalliredigens QYMF]
Length = 239
Score = 43.9 bits (102), Expect = 0.31, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 600 VSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEI-GKRCSSKVEFRSVVSTSKDLQ--F 656
++Q V ++ + + + K +L Y + LQE+ + S ++ ++ + + D F
Sbjct: 143 IAQTFVLNHLIDSVEQATKGSLFRDYKT--YLQELLQSKHSERITYQVIKESGPDHSKIF 200
Query: 657 SVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYV 695
VEVL + +G GMGK++K+A+Q+AA+ A+ + ++YV
Sbjct: 201 DVEVLLGEQLLGHGMGKSKKEAEQRAAKEAVEKIKDQYV 239
>gi|58271496|ref|XP_572904.1| protein phosphatase [Cryptococcus neoformans var. neoformans JEC21]
gi|134115316|ref|XP_773956.1| hypothetical protein CNBH4080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256584|gb|EAL19309.1| hypothetical protein CNBH4080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229163|gb|AAW45597.1| protein phosphatase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 955
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335
+E++V TM R YA + +++DP+G + G + +L R S S K+L +F
Sbjct: 325 YEMHVYTMGTRTYADAIVKVIDPDGKIFGGR-ILSRDES-GSFSSKNLKRLFP---TDTS 379
Query: 336 MAMVIDDRCKVWED 349
M +VIDDR VW D
Sbjct: 380 MVVVIDDRSDVWGD 393
>gi|125541461|gb|EAY87856.1| hypothetical protein OsI_09278 [Oryza sativa Indica Group]
Length = 420
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGS---RKSLLNVFQRGLC 332
FE++V T+ R+YA + +LLDP+G G +R++ S RKSL +VF
Sbjct: 174 FEMHVYTLGNRNYATAVAKLLDPDGAYFG-----ERIISSGESSQPDRKSLGDVFGWAPE 228
Query: 333 HPKMAMVI-DDRCKVWE 348
+ A+VI DD +VW+
Sbjct: 229 MERAAVVILDDTAEVWK 245
>gi|431907029|gb|ELK11148.1| RNA polymerase II subunit A C-terminal domain phosphatase [Pteropus
alecto]
Length = 918
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP + + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 196 TRLRPHCREF----LEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 250
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 251 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 282
>gi|333371186|ref|ZP_08463148.1| ribonuclease III [Desmospora sp. 8437]
gi|332976630|gb|EGK13471.1| ribonuclease III [Desmospora sp. 8437]
Length = 231
Score = 43.9 bits (102), Expect = 0.36, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 647 VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693
V + D QF EV +GEK+G G G+++K+A+QQAA L ++
Sbjct: 183 VQGPAHDRQFVAEVWLSGEKLGTGAGRSKKEAEQQAAAEGLQRFQQQ 229
>gi|313124070|ref|YP_004034329.1| ribonuclease iii [Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312280633|gb|ADQ61352.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 231
Score = 43.9 bits (102), Expect = 0.37, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 631 LQEIGKRCSS-KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689
LQE+ ++ S +E+R + + + F VEVL G+K+ G G+ +K A+Q AA +AL +
Sbjct: 167 LQELLQQNGSVTIEYRVLNESQQPPHFEVEVLVDGKKLASGEGRNKKKAEQDAASHALEH 226
Query: 690 L 690
L
Sbjct: 227 L 227
>gi|116514343|ref|YP_813249.1| ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|418028850|ref|ZP_12667399.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
gi|116093658|gb|ABJ58811.1| RNAse III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|354691187|gb|EHE91125.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
Length = 231
Score = 43.9 bits (102), Expect = 0.37, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 631 LQEIGKRCSS-KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689
LQE+ ++ S +E+R + + + F VEVL G+K+ G G+ +K A+Q AA +AL +
Sbjct: 167 LQELLQQNGSVTIEYRVLNESQQPPHFEVEVLVDGKKLASGEGRNKKKAEQDAASHALEH 226
Query: 690 L 690
L
Sbjct: 227 L 227
>gi|104774253|ref|YP_619233.1| ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
gi|103423334|emb|CAI98181.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
Length = 231
Score = 43.9 bits (102), Expect = 0.37, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 631 LQEIGKRCSS-KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689
LQE+ ++ S +E+R + + + F VEVL G+K+ G G+ +K A+Q AA +AL +
Sbjct: 167 LQELLQQNGSVTIEYRVLNESQQPPHFEVEVLVDGKKLASGEGRNKKKAEQDAASHALEH 226
Query: 690 L 690
L
Sbjct: 227 L 227
>gi|47497024|dbj|BAD19077.1| phosphatase-like [Oryza sativa Japonica Group]
gi|47497233|dbj|BAD19278.1| phosphatase-like [Oryza sativa Japonica Group]
gi|125584004|gb|EAZ24935.1| hypothetical protein OsJ_08715 [Oryza sativa Japonica Group]
Length = 420
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGS---RKSLLNVFQRGLC 332
FE++V T+ R+YA + +LLDP+G G +R++ S RKSL +VF
Sbjct: 174 FEMHVYTLGNRNYATAVAKLLDPDGAYFG-----ERIISSGESSQPDRKSLGDVFGWAPE 228
Query: 333 HPKMAMVI-DDRCKVWE 348
+ A+VI DD +VW+
Sbjct: 229 MERAAVVILDDTAEVWK 245
>gi|358390781|gb|EHK40186.1| hypothetical protein TRIATDRAFT_89336 [Trichoderma atroviride IMI
206040]
Length = 768
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP + + +E++V TM R YAL + R++DP+ L G +RV+
Sbjct: 217 IKLRPGLHEFLETV----STMYELHVYTMGTRAYALNIARIVDPDKKLFG-----NRVIS 267
Query: 315 VK---SGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
S + KSL +F M ++IDDR VW + VVP
Sbjct: 268 RDENGSITAKSLQRLFP---VSTDMVVIIDDRSDVWPMNRPNLIKVVP 312
>gi|385816004|ref|YP_005852395.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|418035104|ref|ZP_12673563.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
gi|325126041|gb|ADY85371.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|354691042|gb|EHE90982.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
Length = 231
Score = 43.9 bits (102), Expect = 0.39, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 631 LQEIGKRCSS-KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689
LQE+ ++ S +E+R + + + F VEVL G+K+ G G+ +K A+Q AA +AL +
Sbjct: 167 LQELLQQNGSVTIEYRVLNESQQPPHFEVEVLVDGKKLASGEGRNKKKAEQDAASHALEH 226
Query: 690 L 690
L
Sbjct: 227 L 227
>gi|300811711|ref|ZP_07092185.1| ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497287|gb|EFK32335.1| ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 231
Score = 43.5 bits (101), Expect = 0.41, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 631 LQEIGKRCSS-KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689
LQE+ ++ S +E+R + + + F VEVL G+K+ G G+ +K A+Q AA +AL +
Sbjct: 167 LQELLQQNGSVTIEYRVLNESQQPPHFEVEVLVDGKKLASGEGRNKKKAEQDAASHALEH 226
Query: 690 L 690
L
Sbjct: 227 L 227
>gi|307106534|gb|EFN54779.1| hypothetical protein CHLNCDRAFT_134722 [Chlorella variabilis]
Length = 513
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 62/148 (41%), Gaps = 33/148 (22%)
Query: 216 EVPPPS------ENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLI 269
EVPP E E+ +R + + + P R + +LRP +R +L
Sbjct: 136 EVPPQGAVTEQREGGEQALRAQLEAQPKGAPMLYCLPHMR---MWTKLRPG---VREFLE 189
Query: 270 AK-----GRKRFEVYVCTMAERDYALEMWRLLDPEGHL-----IGSKQLLDRVVCVKSGS 319
A G+ FE+ V TM +RDYA EM +LLDP G L I S R V
Sbjct: 190 AAKDRQVGQVGFELAVYTMGDRDYAGEMAKLLDPAGSLFHGRIISSGDSTQRYV------ 243
Query: 320 RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
K L V R C +++DD VW
Sbjct: 244 -KDLDVVLGRERC----VLILDDTEGVW 266
>gi|168059994|ref|XP_001781984.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666557|gb|EDQ53208.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 563
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 261 WEDLRSY---LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS 317
W LR + + + K +E+YV TM E+ YA M LLDP G L G + + ++
Sbjct: 236 WTKLRPFAHKFLEEASKLYEMYVYTMGEKIYAQAMAELLDPTGQLFGGR------IISQT 289
Query: 318 GSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S K L +++DD VW
Sbjct: 290 DSTKRHTKDLDVVLGAESAVVILDDTEAVW 319
>gi|359079164|ref|XP_003587804.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Bos taurus]
Length = 994
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 220 TRLRPHCKEF----LEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 274
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 275 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 306
>gi|9758369|dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana]
Length = 1065
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
++ +LRP + S+L + + F +Y+ TM +R+YA +M +LLDP+G G DRV
Sbjct: 800 MMTKLRPF---VHSFL-KEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFG-----DRV 850
Query: 313 VCVKSGS---RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ G+ KSL V L +++DD W
Sbjct: 851 ISRDDGTVRHEKSLDVV----LGQESAVLILDDTENAW 884
>gi|410977919|ref|XP_003995346.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase [Felis catus]
Length = 960
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
R+RP + + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 242 TRVRPHCREF----LEKIARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 296
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 297 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 328
>gi|327270066|ref|XP_003219812.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Anolis carolinensis]
Length = 965
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LD E L S ++L R C
Sbjct: 206 TRLRPHCKEF----LEKIAKLYELHVFTFGSRLYAHTIAAFLDSEKKLF-SHRILSRDEC 260
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ +L N+F C M +IDDR VW+
Sbjct: 261 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 292
>gi|407474084|ref|YP_006788484.1| ribonuclease III [Clostridium acidurici 9a]
gi|407050592|gb|AFS78637.1| ribonuclease III [Clostridium acidurici 9a]
Length = 241
Score = 43.5 bits (101), Expect = 0.50, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 631 LQEI-GKRCSSKVEFRSVVSTSKDLQ--FSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
LQE+ K+ K+E+R V+ D F EVL E +G G+GK++K+A+Q AA +A+
Sbjct: 174 LQELLQKKIKCKIEYRVVLEEGPDHNKIFHTEVLVKDEVLGKGIGKSKKEAEQDAARSAI 233
Query: 688 HYLAE 692
+ + +
Sbjct: 234 NRMED 238
>gi|66361684|ref|XP_627365.1| RNA pol II carboxy terminal domain phosphatase of the HAD
superfamily with a BRCT domain at the C-terminus
[Cryptosporidium parvum Iowa II]
gi|46228744|gb|EAK89614.1| RNA pol II carboxy terminal domain phosphatase of the HAD
superfamily with a BRCT domain at the C-terminus
[Cryptosporidium parvum Iowa II]
Length = 762
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 136 RCLAIVFDLDETLIVAN-TMKSFEDRIEALRSWIAREPDQIRASGMSAEL-KRYMDDRTL 193
R L++V DLD TLI A+ T+ + E + E +I + ++ E+ +Y +
Sbjct: 228 RKLSLVLDLDNTLIHASSTLPEIKKNDEFI------EIKEIMENEITEEIYNKYYGSVVM 281
Query: 194 LKQYTENDCVMDNG-KVFKVQQEEVPPPSENHERIVRPVIR-IPERNLVLTRINPENRDT 251
L +++ ++ G F + E + +++ +I IP N + + I ++R++
Sbjct: 282 LGNKPQSNELLPKGIDHFPHYNNDTDSNIEIYFKLLESLIFCIPFGNSLNSGIERQSRNS 341
Query: 252 SV----LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ 307
S +LRP + + L + ++E+Y+ TM +A R+LDPE SK+
Sbjct: 342 SNWSFGYYKLRPG---VINMLRTLSKDKYEIYMYTMGTEYHAYTSLRILDPELRFFHSKR 398
Query: 308 LLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWED 349
+ R K S KSL +F + +++DD + W D
Sbjct: 399 IFYRNNGFKETSIKSLNTLFPYD---HRTLVILDDIEQAWTD 437
>gi|452981165|gb|EME80925.1| hypothetical protein MYCFIDRAFT_115122, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 770
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335
+E+++ TM R YA + +++DPE + G DR++ + N+ + +
Sbjct: 232 YEMHIYTMGTRAYAESVAKIIDPEKKIFG-----DRILSRNESGSMTAKNLKRLFPVDTR 286
Query: 336 MAMVIDDRCKVW 347
M ++IDDR VW
Sbjct: 287 MVVIIDDRADVW 298
>gi|422843991|ref|ZP_16890701.1| ribonuclease III, partial [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
gi|325685925|gb|EGD27990.1| ribonuclease III [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 154
Score = 43.1 bits (100), Expect = 0.52, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 631 LQEIGKRCSS-KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689
LQE+ ++ S +E+R + + + F VEVL G+K+ G G+ +K A+Q AA +AL +
Sbjct: 90 LQELLQQNGSVTIEYRVLNESQQPPHFEVEVLVDGKKLASGEGRNKKKAEQDAASHALEH 149
Query: 690 L 690
L
Sbjct: 150 L 150
>gi|302497759|ref|XP_003010879.1| hypothetical protein ARB_02918 [Arthroderma benhamiae CBS 112371]
gi|291174424|gb|EFE30239.1| hypothetical protein ARB_02918 [Arthroderma benhamiae CBS 112371]
Length = 1048
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R ++LRP E+ + +E+++ TM R YA + ++
Sbjct: 382 RCFQLVDDGPGMRGCWYYIKLRPGLEEFLKVI----STLYELHIYTMGTRAYAQNVANIV 437
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ + G DR++ + N+ + KM ++IDDR VW+
Sbjct: 438 DPDKKIFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWK 484
>gi|168012675|ref|XP_001759027.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689726|gb|EDQ76096.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 389
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 261 WEDLRSY---LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS 317
W LR + + + K +E+Y+ TM ER YA +M +LLDP L DR++ ++
Sbjct: 59 WTKLRPFAHEFLQEASKLYEMYIYTMGERKYAKKMAKLLDPTRQLFA-----DRIIS-QN 112
Query: 318 GSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
S K L +++DD VW
Sbjct: 113 DSTKRYTKDLDVVLGADSAVVILDDTEAVW 142
>gi|302657133|ref|XP_003020296.1| hypothetical protein TRV_05607 [Trichophyton verrucosum HKI 0517]
gi|291184115|gb|EFE39678.1| hypothetical protein TRV_05607 [Trichophyton verrucosum HKI 0517]
Length = 865
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R ++LRP E+ + +E+++ TM R YA + ++
Sbjct: 198 RCFQLVDDGPGMRGCWYYIKLRPGLEEFLKVI----STLYELHIYTMGTRAYAQNVANIV 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ + G DR++ + N+ + KM ++IDDR VW+
Sbjct: 254 DPDKKIFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWK 300
>gi|355681363|gb|AER96784.1| CTD phosphatase, subunit 1 [Mustela putorius furo]
Length = 819
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
R+RP + + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 104 TRVRPHCREF----LEKIARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 158
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 159 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 190
>gi|145334837|ref|NP_001078764.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis
thaliana]
gi|122154038|sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like
4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal
phosphatase-like 4; Short=AtCPL4; Short=CTD
phosphatase-like 4
gi|95115186|gb|ABF55959.1| carboxyl-terminal phosphatase-like 4 [Arabidopsis thaliana]
gi|332009601|gb|AED96984.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis
thaliana]
Length = 440
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 253 VLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRV 312
++ +LRP + S+L + + F +Y+ TM +R+YA +M +LLDP+G G DRV
Sbjct: 175 MMTKLRPF---VHSFL-KEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFG-----DRV 225
Query: 313 VCVKSGS---RKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ G+ KSL V L +++DD W
Sbjct: 226 ISRDDGTVRHEKSLDVV----LGQESAVLILDDTENAW 259
>gi|326518250|dbj|BAK07377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 16/114 (14%)
Query: 235 PERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWR 294
PER+L + +L +LRP +R +L + F++Y+ TM ++ YA+E+ +
Sbjct: 202 PERSLFTLQ------GMHMLTKLRPF---VRKFL-EEASNMFDMYIYTMGDKAYAIEIAK 251
Query: 295 LLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
LLDP G++ +++ C + + L+V L K+A++IDD VW+
Sbjct: 252 LLDP-GNVYFDSKVISNSDCTQRHQKG--LDVV---LGDDKVAVIIDDTEHVWQ 299
>gi|293376124|ref|ZP_06622372.1| ribonuclease III [Turicibacter sanguinis PC909]
gi|325841637|ref|ZP_08167414.1| ribonuclease III [Turicibacter sp. HGF1]
gi|292645251|gb|EFF63313.1| ribonuclease III [Turicibacter sanguinis PC909]
gi|325489915|gb|EGC92263.1| ribonuclease III [Turicibacter sp. HGF1]
Length = 236
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 630 VLQEIGKRCSSK-VEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENA 686
LQE+ + S K +E+R + T + + F VL G +G G+GKT+K+A+QQAA+ A
Sbjct: 166 TLQELVQADSKKAIEYRIISETGPAHNRSFEAIVLLDGITLGRGIGKTKKEAEQQAAKGA 225
Query: 687 LHYLAEKY 694
+ LA+ +
Sbjct: 226 IEILAKNH 233
>gi|326477486|gb|EGE01496.1| RNA Polymerase II CTD phosphatase Fcp1 [Trichophyton equinum CBS
127.97]
Length = 866
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R ++LRP E+ + +E+++ TM R YA + ++
Sbjct: 198 RCFQLVDDGPGMRGCWYYIKLRPGLEEFLKVI----STLYELHIYTMGTRAYAQNVANIV 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ + G DR++ + N+ + KM ++IDDR VW+
Sbjct: 254 DPDKKIFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWK 300
>gi|229491421|ref|ZP_04385245.1| ribonuclease III [Rhodococcus erythropolis SK121]
gi|453068807|ref|ZP_21972078.1| ribonuclease III [Rhodococcus qingshengii BKS 20-40]
gi|229321706|gb|EEN87503.1| ribonuclease III [Rhodococcus erythropolis SK121]
gi|452764990|gb|EME23255.1| ribonuclease III [Rhodococcus qingshengii BKS 20-40]
Length = 257
Score = 43.1 bits (100), Expect = 0.60, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 631 LQEIGKRCSSKVEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH 688
LQE+ + V + +T D +F+ VL +G+ +GVG+G+++K+A+Q+AA +A
Sbjct: 177 LQELTAEHGAGVPVYEITATGPDHDKEFTATVLISGKPLGVGVGRSKKEAEQKAASSAWK 236
Query: 689 YLAE 692
++E
Sbjct: 237 TMSE 240
>gi|91087589|ref|XP_971974.1| PREDICTED: similar to RNA polymerase II subunit A C-terminal domain
phosphatase [Tribolium castaneum]
gi|270010700|gb|EFA07148.1| hypothetical protein TcasGA2_TC010139 [Tribolium castaneum]
Length = 760
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 15/211 (7%)
Query: 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVV 313
RLRP + + +E+++CT R+YA + +LD + S ++L R
Sbjct: 182 FTRLRPGTHQFLNNIYP----FYELHICTFGARNYAHMIAAVLDRDQKFF-SNRILSRDE 236
Query: 314 CVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETAN 373
C S+K+ L C M +IDDR VW + +HV P ++ N
Sbjct: 237 CFDPTSKKANLKAL--FPCGDNMVCIIDDREDVWSNAAN-LIHVKPY---HFFQHTGDIN 290
Query: 374 AVPVLCVARNVACNVRGCFFKE--FDENLLRSISEVFYEDEAVNLPAAPD--VSNYLMSE 429
A P L N V K+ DE + + S+ D N + V N + +E
Sbjct: 291 APPGLDKHENDNKGVDLTKIKDQKKDEQIQNNDSKATENDSDKNGENVEESKVENQVSNE 350
Query: 430 DANFAPNGSTNAPMSEGLNGLEVERRLNQSD 460
+ N +EG N +V+ N D
Sbjct: 351 SESTKNESKENTEDNEGNNKDKVDENKNGDD 381
>gi|296810642|ref|XP_002845659.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Arthroderma otae CBS 113480]
gi|238843047|gb|EEQ32709.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Arthroderma otae CBS 113480]
Length = 832
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R ++LRP E+ + + +E+++ TM R YA + ++
Sbjct: 169 RCFQLVDDGPGMRGCWYYIKLRPGLEEFLKVVSS----LYELHIYTMGTRAYAQNVANIV 224
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ + G DR++ + N+ + KM ++IDDR VW+
Sbjct: 225 DPDRKIFG-----DRILSRDESGSLTAKNLHRLFPVDTKMVVIIDDRGDVWK 271
>gi|327296037|ref|XP_003232713.1| RNA Polymerase II CTD phosphatase [Trichophyton rubrum CBS 118892]
gi|326465024|gb|EGD90477.1| RNA Polymerase II CTD phosphatase [Trichophyton rubrum CBS 118892]
Length = 836
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R ++LRP E+ + +E+++ TM R YA + ++
Sbjct: 169 RCFQLVDDGPGMRGCWYYIKLRPGLEEFLKVI----STLYELHIYTMGTRAYAQNVANIV 224
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ + G DR++ + N+ + KM ++IDDR VW+
Sbjct: 225 DPDKKIFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWK 271
>gi|302838991|ref|XP_002951053.1| hypothetical protein VOLCADRAFT_91454 [Volvox carteri f.
nagariensis]
gi|300263748|gb|EFJ47947.1| hypothetical protein VOLCADRAFT_91454 [Volvox carteri f.
nagariensis]
Length = 699
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 204 MDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWED 263
+D+ + V EV P + ++ + R E NL R+ + + +LRP +
Sbjct: 378 LDHTLLNSVHTSEVGPDTAT--QLAEVLRREEEANLGPRRLLHRLAENKLWTKLRPGVFE 435
Query: 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSL 323
L R +E+++ TM ++ YA E+ +LLDP G L S V K S +
Sbjct: 436 FLEGL----RDDYEMHIYTMGDKTYAAEVRKLLDPTGKLFSS-------VIAKDHSTTAT 484
Query: 324 LNVFQRGLCHPKMAMVIDDRCKVW 347
L ++A+V+DD VW
Sbjct: 485 AKDLDVLLSADELALVLDDTEAVW 508
>gi|388853856|emb|CCF52577.1| related to FCP1-TFIIF interacting component of CTD phosphatase
[Ustilago hordei]
Length = 471
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 16/108 (14%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
V+LRP ++ + K ++++++V TM R YA + +L+DP+ + G +R+V
Sbjct: 106 VKLRPGVPEI----LKKLSEKYQLHVYTMGTRSYANLVCKLIDPDASIFG-----NRIVS 156
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
++GS RKSL +F + H M ++IDDR VW K + VVP
Sbjct: 157 RNENGSLVRKSLDKLFP--MDH-SMVVIIDDREDVWS-KSPNLLQVVP 200
>gi|326475449|gb|EGD99458.1| RNA Polymerase II CTD phosphatase [Trichophyton tonsurans CBS
112818]
Length = 866
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R ++LRP E+ + +E+++ TM R YA + ++
Sbjct: 198 RCFQLVDDGPGMRGCWYYIKLRPGLEEFLKVI----STLYELHIYTMGTRAYAQNVANIV 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ + G DR++ + N+ + KM ++IDDR VW+
Sbjct: 254 DPDKKIFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWK 300
>gi|432884093|ref|XP_004074439.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Oryzias latipes]
Length = 1129
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP ++ + K K +E++V T R YA + LDPE L S ++L R C
Sbjct: 213 TRLRPHCKEF----LEKTAKLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 267
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L C M +IDDR VW+
Sbjct: 268 IDPFSKTGNLRYLFP--CGDSMVCIIDDREDVWK 299
>gi|73945347|ref|XP_533365.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase isoform 1 [Canis lupus familiaris]
Length = 933
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
R+RP + + K + +E++V T R YA + LDPE L S ++L R C
Sbjct: 220 TRVRPHCREF----LEKIARLYELHVFTFGSRLYAHTIAGFLDPEKKLF-SHRILSRDEC 274
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVWE 348
+ S+ L N+F C M +IDDR VW+
Sbjct: 275 IDPFSKTGNLRNLFP---CGDSMVCIIDDREDVWK 306
>gi|340377687|ref|XP_003387360.1| PREDICTED: hypothetical protein LOC100639785 [Amphimedon
queenslandica]
Length = 913
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCV 315
RLRP + +++ + +E++V TM RDYA + ++LD E L S +++ R +
Sbjct: 191 RLRPYVREFLNHI----SQYYELHVATMGTRDYADAITKILDQEKKLF-SHRVISRNELL 245
Query: 316 KSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVW 347
S+ L +VF C +M ++DDR VW
Sbjct: 246 DPHSKAVRLKSVFP---CGDEMVAIMDDRGDVW 275
>gi|188593372|emb|CAP07635.1| drosha protein [Oikopleura dioica]
Length = 1096
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 643 EFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL--HYLAEK--YVAYI 698
E+R+ S S +++ VEV F GE+IG G G + + A++ AA AL +Y ++ YI
Sbjct: 946 EYRTTTSNSSKMRYRVEVFFRGERIGEGHGPSIQLAEKFAARKALEKYYFPQREWQQYYI 1005
Query: 699 TPRSGAMDR 707
++ M+R
Sbjct: 1006 NNKASLMNR 1014
>gi|391345370|ref|XP_003746962.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Metaseiulus occidentalis]
Length = 475
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 246 PENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGS 305
P + + R+RP ED + K + FE+++ T R YA + LLDP G
Sbjct: 63 PSSNNAWYHTRIRPGTEDF----LRKISQLFELHIVTFGARPYANHIASLLDP-GKKYFQ 117
Query: 306 KQLLDRVVCVKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVW 347
++L R C S+ + L ++F C +M +IDDR VW
Sbjct: 118 YRILSRDECFNPQSKTANLKSLFP---CGDQMVCIIDDREDVW 157
>gi|159483481|ref|XP_001699789.1| hypothetical protein CHLREDRAFT_141879 [Chlamydomonas reinhardtii]
gi|158281731|gb|EDP07485.1| predicted protein [Chlamydomonas reinhardtii]
Length = 375
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 250 DTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLL 309
D + +LRP + L R +E+++ TM ++ YA E+ RLLDP G L S
Sbjct: 178 DKKLWTKLRPGVFEFLEGL----RDAYEMHIYTMGDKTYAAEVRRLLDPTGRLFSS---- 229
Query: 310 DRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQA 369
V K S + L ++A+V+DD VW + + V+ A + Q
Sbjct: 230 ---VIAKDHSTTATAKHLDVLLSADELALVLDDTEVVWPGHRRNLLQVMSAVGLQFFSQE 286
Query: 370 ET 371
++
Sbjct: 287 DS 288
>gi|307168754|gb|EFN61749.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Camponotus floridanus]
Length = 721
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
R RP + R +L ++ +E+++CT R YA + LLD +G L S ++L R C
Sbjct: 197 TRFRP---NTRHFL-SEMSHLYELHICTFGARIYAHTVASLLDKDGILF-SHRILSRDEC 251
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
S+ + L C + +IDDR VW+
Sbjct: 252 FDPASKTANLKAL--FPCGDDLVCIIDDREDVWQ 283
>gi|340931931|gb|EGS19464.1| hypothetical protein CTHT_0049250 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 871
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 19/98 (19%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
+++RP E + + + +E++V TM R YA + R++DP+ L G +RV+
Sbjct: 220 IKMRPGLEGF----LKRISEMYELHVYTMGTRAYAQNVARVVDPDRKLFG-----NRVI- 269
Query: 315 VKSGSRKSLLNVFQRGL-----CHPKMAMVIDDRCKVW 347
SR N++ + L M ++IDDR VW
Sbjct: 270 ----SRDENGNIYTKSLQRLFPVSTNMVVIIDDRSDVW 303
>gi|313224789|emb|CBY20581.1| unnamed protein product [Oikopleura dioica]
Length = 538
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 643 EFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL--HYLAEK--YVAYI 698
E+R+ S S +++ VEV F GE+IG G G + + A++ AA AL +Y ++ YI
Sbjct: 388 EYRTTTSNSSKMRYRVEVFFRGERIGEGHGPSIQLAEKFAARKALEKYYFPQREWQQYYI 447
Query: 699 TPRSGAMDR 707
++ M+R
Sbjct: 448 NNKASLMNR 456
>gi|378756636|gb|EHY66660.1| hypothetical protein NERG_00300 [Nematocida sp. 1 ERTm2]
Length = 507
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 26/169 (15%)
Query: 220 PSENHERIVRPVIRIPERNLVLTRINPENRDT--------SVLVRLRPAWEDLRSYLIAK 271
PS + R R +N L I+ + +D + V+LR D + + +
Sbjct: 162 PSTDERRKKRKFSFDEYKNEYLKEIDSQLKDIREIKIDGYTYYVKLR----DRLEWFLKE 217
Query: 272 GRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLL--DRVVCVKSGSRKSLLNVFQR 329
K E+++ TM + YA + ++LDP G L GS+ + D C K + +F
Sbjct: 218 AEKYCEMHIYTMGNKAYATAIVKILDPTGKLFGSRIITRDDNFGCFD----KDIKRLFP- 272
Query: 330 GLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVL 378
+ K +++DDR VW D ++ P PYY + + N+ L
Sbjct: 273 --TNSKHVIILDDRPDVWGFVD----NLYP-IKPYYFFETDDINSPEAL 314
>gi|268566337|ref|XP_002639695.1| C. briggsae CBR-FCP-1 protein [Caenorhabditis briggsae]
Length = 723
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 241 LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG 300
+T+ N +R + +LRP + + + A +E+++ T +R YA + ++LDP+
Sbjct: 186 ITKYNLHSRVYTT--KLRPHTTEFLNKMSA----MYEMHIVTYGQRQYAHRIAQILDPDA 239
Query: 301 HLIGSKQL-LDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
L G + L D + + +R +L +F C + ++IDDR VW+
Sbjct: 240 RLFGQRILSRDELFSAQHKTR-NLKALFP---CGDNLVVIIDDRADVWQ 284
>gi|453078061|ref|ZP_21980795.1| ribonuclease III [Rhodococcus triatomae BKS 15-14]
gi|452757696|gb|EME16098.1| ribonuclease III [Rhodococcus triatomae BKS 15-14]
Length = 231
Score = 42.4 bits (98), Expect = 0.89, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 631 LQEIGKRCSSKVEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH 688
LQE+ + V + ST D +F+ VL G GVG+G+T+K+A+Q+AA +A
Sbjct: 142 LQELTAERGAGVPVYEITSTGPDHDKEFTATVLVAGAPFGVGVGRTKKEAEQKAASSAWQ 201
Query: 689 YLAE 692
L +
Sbjct: 202 TLTD 205
>gi|315051428|ref|XP_003175088.1| RNA polymerase II subunit A domain phosphatase [Arthroderma gypseum
CBS 118893]
gi|311340403|gb|EFQ99605.1| RNA polymerase II subunit A domain phosphatase [Arthroderma gypseum
CBS 118893]
Length = 867
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 237 RNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296
R L P R ++LRP E+ + +E+++ TM R YA + ++
Sbjct: 198 RCFQLVDDGPGMRGCWYYIKLRPGLEEFLKVI----STLYELHIYTMGTRAYAQNVANIV 253
Query: 297 DPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWE 348
DP+ + G DR++ + N+ + KM ++IDDR VW+
Sbjct: 254 DPDRKIFG-----DRILSRDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWK 300
>gi|167520468|ref|XP_001744573.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776904|gb|EDQ90522.1| predicted protein [Monosiga brevicollis MX1]
Length = 858
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335
+E+++ TM R+YA + R++DP ++ L K+L + G
Sbjct: 126 YEMHIYTMGRRNYAERILRIIDPSNRFFSTRILTQDESFSIENKAKNLDALLPGG---DS 182
Query: 336 MAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVP 376
MA+++DD VW+ + +VVPA + E NA+P
Sbjct: 183 MAVILDDLPAVWDFQ----TNVVPALPYEFFKHVEEVNAIP 219
>gi|392578708|gb|EIW71836.1| hypothetical protein TREMEDRAFT_67978 [Tremella mesenterica DSM
1558]
Length = 944
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 274 KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCH 333
K +E++V TM R YA + ++DPEG G + +L R ++ + K+L +F
Sbjct: 370 KLYEMHVYTMGTRTYAEAIVGIVDPEGKYFGGR-ILSRDDS-RNFTTKNLKRLFP---TD 424
Query: 334 PKMAMVIDDRCKVWED 349
M +VIDDR VW D
Sbjct: 425 TSMVVVIDDRADVWGD 440
>gi|156381374|ref|XP_001632240.1| predicted protein [Nematostella vectensis]
gi|156219293|gb|EDO40177.1| predicted protein [Nematostella vectensis]
Length = 122
Score = 42.4 bits (98), Expect = 1.00, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 268 LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSR-KSLLNV 326
+ K K +E+++ TM R YA + R+LDP+ L G + + R C + S+ L ++
Sbjct: 14 FLQKIAKFYELHIFTMGTRMYAHTIARMLDPDLSLFGYR-IRSRDDCFNAFSKFNDLRSL 72
Query: 327 FQRGLCHPKMAMVIDDRCKVWED 349
F C M +IDDR VW +
Sbjct: 73 FP---CGDSMVCIIDDRADVWNN 92
>gi|71004098|ref|XP_756715.1| hypothetical protein UM00568.1 [Ustilago maydis 521]
gi|46095984|gb|EAK81217.1| hypothetical protein UM00568.1 [Ustilago maydis 521]
Length = 779
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 274 KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGS--RKSLLNVFQRGL 331
+++E++V TM R YA + +L+DP+ + G++ +L R ++GS RKSL +F
Sbjct: 158 EKYELHVYTMGTRSYANCVCKLIDPDASIFGNR-ILSR---DENGSLVRKSLSRLFP--- 210
Query: 332 CHPKMAMVIDDRCKVW 347
M ++IDDR VW
Sbjct: 211 VDHSMVVIIDDREDVW 226
>gi|295671060|ref|XP_002796077.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284210|gb|EEH39776.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 829
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP ++ + A +E+++ TM R YA + ++DP+ + G DR++
Sbjct: 312 IKLRPGLQEFLQEISA----LYELHIYTMGTRAYAQNIATIVDPDRKIFG-----DRILS 362
Query: 315 VKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKD 351
+ N+ + KM ++IDDR VW+ D
Sbjct: 363 RDESGSLTAKNLQRLFPVDTKMVVIIDDRGDVWKWSD 399
>gi|391332118|ref|XP_003740485.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like [Metaseiulus occidentalis]
Length = 646
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
R+RP ED + K + FE+++ T R YA + LLDP G ++L R C
Sbjct: 182 TRIRPGTEDF----LRKISQLFELHIVTFGARPYANHIVSLLDP-GKKYFQYRILTRDEC 236
Query: 315 VKSGSRKS-LLNVFQRGLCHPKMAMVIDDRCKVW 347
S+ + L ++F C +M +IDDR VW
Sbjct: 237 FHPQSKTANLKSLFP---CGDQMVCIIDDREDVW 267
>gi|308499240|ref|XP_003111806.1| CRE-LET-716 protein [Caenorhabditis remanei]
gi|308239715|gb|EFO83667.1| CRE-LET-716 protein [Caenorhabditis remanei]
Length = 1758
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 21/130 (16%)
Query: 343 RCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLL- 401
+C+VW+ +Q + +V A + +AN V L + + C VR K FD ++
Sbjct: 482 KCRVWQICEQRKNLIVTCREQILALKGPSANTVEELEIGNTLPCVVR----KVFDSGVIL 537
Query: 402 ----RSISEVFYEDEAVNLPAAPDVSNYLMSEDANFAPN---------GSTNAPMSEGLN 448
+IS V ++ A++LPA P V+++++ N + NA ++ G N
Sbjct: 538 LATFNNISGVLRKESAIHLPATPKVNDFVIVNVEKIEENNRVIFVLRDANMNAALASGQN 597
Query: 449 GLEVERRLNQ 458
E++L Q
Sbjct: 598 S---EKKLVQ 604
>gi|338811275|ref|ZP_08623500.1| ribonuclease III [Acetonema longum DSM 6540]
gi|337276744|gb|EGO65156.1| ribonuclease III [Acetonema longum DSM 6540]
Length = 239
Score = 42.0 bits (97), Expect = 1.2, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 630 VLQE-IGKRCSSKVEFRSVVSTSKDLQ--FSVEVLFTGEKIGVGMGKTRKDAQQQAAENA 686
+LQE + K KV++ V D F V V G ++G+G GKT+K+++Q AA+ A
Sbjct: 170 ILQERVQKNTDGKVQYEVVSERGPDHDKLFEVAVSVNGRRLGIGAGKTKKESEQNAAKQA 229
Query: 687 L 687
L
Sbjct: 230 L 230
>gi|226288832|gb|EEH44344.1| RNA polymerase II C-terminal domain phosphatase component
[Paracoccidioides brasiliensis Pb18]
Length = 920
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
++LRP ++ + A +E+++ TM R YA + ++DP+ + G DR++
Sbjct: 187 IKLRPGLQEFLQEISA----LYELHIYTMGTRAYAQNIAAIVDPDRKIFG-----DRILS 237
Query: 315 V-KSGS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKD 351
+SGS K+L +F KM ++IDDR VW+ D
Sbjct: 238 RDESGSLTAKNLQRLFP---VDTKMVVIIDDRGDVWKWSD 274
>gi|427394181|ref|ZP_18887683.1| ribonuclease III [Alloiococcus otitis ATCC 51267]
gi|425730169|gb|EKU93012.1| ribonuclease III [Alloiococcus otitis ATCC 51267]
Length = 235
Score = 42.0 bits (97), Expect = 1.3, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 630 VLQEIGKRCSSKVEFRSVVSTSKDLQ--FSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
++QE G+ K+++ V + D F VEV G+ GVG G ++K AQQQAA+ AL
Sbjct: 169 LMQENGE---VKIDYDVVDTKGPDHNRTFYVEVKIEGDSYGVGQGNSKKRAQQQAAKKAL 225
Query: 688 HYLAEK 693
L++K
Sbjct: 226 EQLSQK 231
>gi|406695220|gb|EKC98531.1| protein phosphatase [Trichosporon asahii var. asahii CBS 8904]
Length = 917
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 274 KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCH 333
K +E++V TM R YA + +++DPEG S KSL+ +F
Sbjct: 324 KLYEMHVYTMGTRSYADAICKIVDPEGKYFAM-------------SAKSLVRLFPHDQS- 369
Query: 334 PKMAMVIDDRCKVWEDKDQPRVHVVP 359
M ++IDDR VW D V VVP
Sbjct: 370 --MVVIIDDRSDVWGDSPN-LVKVVP 392
>gi|156549638|ref|XP_001604265.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase-like, partial [Nasonia vitripennis]
Length = 512
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 277 EVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKM 336
E+++CT R YA + +LD +G L S ++L R C S+ + L C M
Sbjct: 1 ELHICTFGARQYAHRVAAILDNDGKLF-SHRILSRDECFDPQSKTANLKAL--FPCGVDM 57
Query: 337 AMVIDDRCKVWE 348
+IDDR VW+
Sbjct: 58 VCIIDDRDDVWQ 69
>gi|401886990|gb|EJT50998.1| protein phosphatase [Trichosporon asahii var. asahii CBS 2479]
Length = 922
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 274 KRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCH 333
K +E++V TM R YA + +++DPEG S KSL+ +F
Sbjct: 324 KLYEMHVYTMGTRSYADAICKIVDPEGKYFAM-------------SAKSLVRLFPHDQS- 369
Query: 334 PKMAMVIDDRCKVWEDKDQPRVHVVP 359
M ++IDDR VW D V VVP
Sbjct: 370 --MVVIIDDRSDVWGDSPN-LVKVVP 392
>gi|448925015|gb|AGE48596.1| RNase III [Paramecium bursaria Chlorella virus AN69C]
Length = 275
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 656 FSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691
F V+V+ G+KI G GK+RKDA+Q A++ ALH +
Sbjct: 233 FIVDVVINGQKISTGTGKSRKDAEQNASKIALHTMG 268
>gi|440751055|ref|ZP_20930293.1| Ribonuclease III [Mariniradius saccharolyticus AK6]
gi|436480398|gb|ELP36636.1| Ribonuclease III [Mariniradius saccharolyticus AK6]
Length = 219
Score = 42.0 bits (97), Expect = 1.4, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 633 EIGKRCSSKVEFRSVV--STSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYL 690
E ++ +S V+FR+V + + +F VE+L E + G G T+K A+Q+AA+NA L
Sbjct: 156 EWSQKENSSVDFRTVSIDGSQRFKEFVVELLINNEPVATGKGATKKKAEQEAAKNACEIL 215
>gi|9632031|ref|NP_048820.1| Rnase III [Paramecium bursaria Chlorella virus 1]
gi|2500556|sp|Q98514.1|A464_PBCV1 RecName: Full=Putative protein A464R
gi|1620135|gb|AAC96831.1| Rnase III [Paramecium bursaria Chlorella virus 1]
gi|448930388|gb|AGE53953.1| RNase III [Paramecium bursaria Chlorella virus IL-3A]
gi|448931083|gb|AGE54646.1| RNase III [Paramecium bursaria Chlorella virus KS1B]
gi|448933830|gb|AGE57385.1| RNase III [Paramecium bursaria Chlorella virus NE-JV-4]
Length = 275
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 656 FSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691
F V+V+ G+KI G GK+RKDA+Q A++ ALH +
Sbjct: 233 FIVDVVINGQKISTGTGKSRKDAEQNASKIALHTMG 268
>gi|67588036|ref|XP_665317.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54655944|gb|EAL35087.1| hypothetical protein Chro.80553 [Cryptosporidium hominis]
Length = 364
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 136 RCLAIVFDLDETLIVAN-TMKSFEDRIEALRSWIAREPDQIRASGMSAEL-KRYMDDRTL 193
R L++V DLD TLI A+ T+ + E + E +I + ++ E+ +Y +
Sbjct: 61 RKLSLVLDLDNTLIHASSTLPEIKKNDEFI------EIKEIMENEITEEIYNKYYGSVVM 114
Query: 194 LKQYTENDCVMDNG-KVFKVQQEEVPPPSENHERIVRPVIR-IPERNLVLTRINPENRDT 251
L ++ ++ G F + E + +++ +I IP N + + I ++R++
Sbjct: 115 LGNKPQSTELLPKGIDHFPHYNNDTDSNIEIYFKLLESLIFCIPFGNSLNSGIERQSRNS 174
Query: 252 SV----LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ 307
S +LRP ++ L + ++E+Y+ TM +A R+LDPE SK+
Sbjct: 175 SNWSFGYYKLRPGVINM---LRTLSKDKYEIYMYTMGTEYHAYTSLRILDPELRFFHSKR 231
Query: 308 LLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWED 349
+ R K S KSL +F + +++DD + W D
Sbjct: 232 IFYRNNGFKETSIKSLNTLFPYD---HRTLVILDDIEQAWTD 270
>gi|440683448|ref|YP_007158243.1| Ribonuclease 3 [Anabaena cylindrica PCC 7122]
gi|428680567|gb|AFZ59333.1| Ribonuclease 3 [Anabaena cylindrica PCC 7122]
Length = 395
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 629 GVLQEIGKRCSSKV-EFRSVVSTSKD--LQFSVEVLFTGEKIGVGMGKTRKDAQQQAAEN 685
G+LQ+ ++ + E+ ++ T D +F+V+V G+ G G GK +KDA++QAA N
Sbjct: 328 GLLQQYAQKNGFDIPEYTTIQETGTDHNKEFTVQVEIGGQICGQGKGKRKKDAEKQAAAN 387
Query: 686 ALHYL 690
AL L
Sbjct: 388 ALEKL 392
>gi|448928010|gb|AGE51582.1| RNase III [Paramecium bursaria Chlorella virus CviKI]
gi|448929030|gb|AGE52599.1| RNase III [Paramecium bursaria Chlorella virus CvsA1]
gi|448931832|gb|AGE55393.1| RNase III [Paramecium bursaria Chlorella virus MA-1E]
Length = 275
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 656 FSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691
F V+V+ G+KI G GK+RKDA+Q A++ ALH +
Sbjct: 233 FIVDVVINGQKISTGTGKSRKDAEQNASKIALHTMG 268
>gi|29377554|ref|NP_816708.1| ribonuclease III [Enterococcus faecalis V583]
gi|255970707|ref|ZP_05421293.1| ribonuclease III [Enterococcus faecalis T1]
gi|255974283|ref|ZP_05424869.1| ribonuclease III [Enterococcus faecalis T2]
gi|256618145|ref|ZP_05474991.1| ribonuclease III [Enterococcus faecalis ATCC 4200]
gi|256761074|ref|ZP_05501654.1| ribonuclease III [Enterococcus faecalis T3]
gi|256958378|ref|ZP_05562549.1| ribonuclease III [Enterococcus faecalis DS5]
gi|256960445|ref|ZP_05564616.1| ribonuclease III [Enterococcus faecalis Merz96]
gi|256962935|ref|ZP_05567106.1| ribonuclease III [Enterococcus faecalis HIP11704]
gi|257078311|ref|ZP_05572672.1| ribonuclease III [Enterococcus faecalis JH1]
gi|257080500|ref|ZP_05574861.1| ribonuclease III [Enterococcus faecalis E1Sol]
gi|257083236|ref|ZP_05577597.1| ribonuclease III [Enterococcus faecalis Fly1]
gi|257088212|ref|ZP_05582573.1| ribonuclease III [Enterococcus faecalis D6]
gi|257091337|ref|ZP_05585698.1| ribonuclease III [Enterococcus faecalis CH188]
gi|257417226|ref|ZP_05594220.1| ribonuclease III [Enterococcus faecalis ARO1/DG]
gi|257417943|ref|ZP_05594937.1| ribonuclease III [Enterococcus faecalis T11]
gi|257420449|ref|ZP_05597439.1| ribonuclease III [Enterococcus faecalis X98]
gi|294780225|ref|ZP_06745597.1| ribonuclease III [Enterococcus faecalis PC1.1]
gi|300861565|ref|ZP_07107649.1| ribonuclease III [Enterococcus faecalis TUSoD Ef11]
gi|428768209|ref|YP_007154320.1| ribonuclease III [Enterococcus faecalis str. Symbioflor 1]
gi|75541427|sp|Q82ZG1.1|RNC_ENTFA RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|29345021|gb|AAO82778.1| ribonuclease III [Enterococcus faecalis V583]
gi|255961725|gb|EET94201.1| ribonuclease III [Enterococcus faecalis T1]
gi|255967155|gb|EET97777.1| ribonuclease III [Enterococcus faecalis T2]
gi|256597672|gb|EEU16848.1| ribonuclease III [Enterococcus faecalis ATCC 4200]
gi|256682325|gb|EEU22020.1| ribonuclease III [Enterococcus faecalis T3]
gi|256948874|gb|EEU65506.1| ribonuclease III [Enterococcus faecalis DS5]
gi|256950941|gb|EEU67573.1| ribonuclease III [Enterococcus faecalis Merz96]
gi|256953431|gb|EEU70063.1| ribonuclease III [Enterococcus faecalis HIP11704]
gi|256986341|gb|EEU73643.1| ribonuclease III [Enterococcus faecalis JH1]
gi|256988530|gb|EEU75832.1| ribonuclease III [Enterococcus faecalis E1Sol]
gi|256991266|gb|EEU78568.1| ribonuclease III [Enterococcus faecalis Fly1]
gi|256996242|gb|EEU83544.1| ribonuclease III [Enterococcus faecalis D6]
gi|257000149|gb|EEU86669.1| ribonuclease III [Enterococcus faecalis CH188]
gi|257159054|gb|EEU89014.1| ribonuclease III [Enterococcus faecalis ARO1/DG]
gi|257159771|gb|EEU89731.1| ribonuclease III [Enterococcus faecalis T11]
gi|257162273|gb|EEU92233.1| ribonuclease III [Enterococcus faecalis X98]
gi|294452768|gb|EFG21198.1| ribonuclease III [Enterococcus faecalis PC1.1]
gi|295114417|emb|CBL33054.1| RNAse III [Enterococcus sp. 7L76]
gi|300849026|gb|EFK76779.1| ribonuclease III [Enterococcus faecalis TUSoD Ef11]
gi|427186382|emb|CCO73606.1| ribonuclease III [Enterococcus faecalis str. Symbioflor 1]
Length = 230
Score = 41.6 bits (96), Expect = 1.6, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 631 LQEIGKRCSS-KVEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
LQE+ +R +E+R + + D F EV GE IG+G GK++K A+Q AAE AL
Sbjct: 166 LQEVLQRKGDVSIEYRLIKEEGPAHDRTFFTEVYMNGELIGLGQGKSKKLAEQDAAERAL 225
Query: 688 HYLAE 692
+ +
Sbjct: 226 KSIPQ 230
>gi|299470348|emb|CBN78397.1| Similar to RNA Polymerase II CTD phosphatase Fcp1, putative
[Ectocarpus siliculosus]
Length = 985
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 248 NRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ 307
N+ ++LRP LR +L A+ FE+ + T YA + +LDP+ L +
Sbjct: 297 NQQREYYIKLRPG---LRRFL-AQAATMFEMTIYTAGTSQYADAVASVLDPDRSLFQGRH 352
Query: 308 LLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ KSL +F GL MA+++DDR VW
Sbjct: 353 FSTCYTPDLGRNTKSLERIFPNGL---DMALIVDDRDDVW 389
>gi|335030027|ref|ZP_08523526.1| ribonuclease III [Streptococcus infantis SK1076]
gi|334267489|gb|EGL85949.1| ribonuclease III [Streptococcus infantis SK1076]
Length = 232
Score = 41.6 bits (96), Expect = 1.8, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + + D F VEVL G+ +G G G+++K A+Q+AA+NA+
Sbjct: 183 SEIGPAHDKMFQVEVLVEGKSLGTGQGRSKKLAEQEAAKNAV 224
>gi|375088734|ref|ZP_09735072.1| ribonuclease III [Dolosigranulum pigrum ATCC 51524]
gi|374561699|gb|EHR33038.1| ribonuclease III [Dolosigranulum pigrum ATCC 51524]
Length = 232
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 646 SVVSTS---KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691
+V+ TS D +F+VEV G+ GVGMGK++K A+Q+AA+ AL L+
Sbjct: 183 TVLETSGPDHDREFTVEVSIEGDYHGVGMGKSKKLAEQKAAKQALEALS 231
>gi|388858248|emb|CCF48177.1| related to FCP1-TFIIF interacting component of CTD phosphatase
[Ustilago hordei]
Length = 774
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 268 LIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGS--RKSLLN 325
++ K ++++++V TM R YA + +L+DP+ + G++ +L R ++GS RKSL
Sbjct: 153 IVKKLSEKYQLHVYTMGTRSYANCVCKLIDPDASIFGNR-ILSR---DENGSLVRKSLNR 208
Query: 326 VFQRGLCHPKMAMVIDDRCKVW 347
+F M ++IDDR VW
Sbjct: 209 LFP---VDHSMVVIIDDREDVW 227
>gi|309800535|ref|ZP_07694686.1| ribonuclease III [Streptococcus infantis SK1302]
gi|308115846|gb|EFO53371.1| ribonuclease III [Streptococcus infantis SK1302]
Length = 115
Score = 41.2 bits (95), Expect = 2.1, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + + D F VEVL G+ +G G G+++K A+Q+AA+NA+
Sbjct: 66 SEIGPAHDKMFEVEVLVEGQSLGSGKGRSKKLAEQEAAKNAV 107
>gi|297850432|ref|XP_002893097.1| hypothetical protein ARALYDRAFT_472260 [Arabidopsis lyrata subsp.
lyrata]
gi|297338939|gb|EFH69356.1| hypothetical protein ARALYDRAFT_472260 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 250 DTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLL 309
D +L++LRP + + + + F +YV TM RDYA + +L+DP+ G
Sbjct: 117 DREMLIKLRPFVHEF----LNEANEFFSMYVYTMGNRDYAQAVLKLIDPKKVYFG----- 167
Query: 310 DRVVCV-KSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
DRV+ +SG K+L V L +++DD VW D ++ + +
Sbjct: 168 DRVITRDESGFSKTLDLV----LADECGVVIVDDTRHVWPDHERNLLQITK 214
>gi|417848443|ref|ZP_12494388.1| ribonuclease III [Streptococcus mitis SK1073]
gi|339452657|gb|EGP65280.1| ribonuclease III [Streptococcus mitis SK1073]
Length = 232
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F+VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFNVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|426201370|gb|EKV51293.1| hypothetical protein AGABI2DRAFT_114027 [Agaricus bisporus var.
bisporus H97]
Length = 814
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 128 SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRY 187
S +L R L+++ DLD+T++ A + + I +W AR+ + + ++
Sbjct: 153 SAEHLLKSRKLSLIVDLDQTIVHATVDPTVGEWIAEGEAWEARQTPKASTTPQPSDKSDD 212
Query: 188 MDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPE 247
T ++C + + V++ + P E P R P+R+ ++ E
Sbjct: 213 ----TNSDSDDNDECNPNWEALKDVKKFRLGP-----ESFSTPYARGPQRSKGKHKMV-E 262
Query: 248 NRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ 307
N ++ RP W++ + K ++++V TM R YA E+ +DP+G + S+
Sbjct: 263 NEGCMYYIKPRPGWKEFLMDMATK----YDMHVYTMGTRAYAEEVCAAIDPDGSVFKSRI 318
Query: 308 L 308
L
Sbjct: 319 L 319
>gi|148985143|ref|ZP_01818382.1| ribonuclease III [Streptococcus pneumoniae SP3-BS71]
gi|418157285|ref|ZP_12794001.1| RNase3 domain protein [Streptococcus pneumoniae GA16833]
gi|147922588|gb|EDK73706.1| ribonuclease III [Streptococcus pneumoniae SP3-BS71]
gi|353823733|gb|EHE03907.1| RNase3 domain protein [Streptococcus pneumoniae GA16833]
Length = 153
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 72 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 131
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 132 SKKLAEQEAAKNAV 145
>gi|417936280|ref|ZP_12579597.1| ribonuclease III [Streptococcus infantis X]
gi|343403189|gb|EGV15694.1| ribonuclease III [Streptococcus infantis X]
Length = 232
Score = 41.2 bits (95), Expect = 2.5, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + + D F VEVL G+ +G G G+++K A+Q+AA+NA+
Sbjct: 183 SEIGPAHDKMFEVEVLVEGQSLGKGQGRSKKLAEQEAAKNAV 224
>gi|289168052|ref|YP_003446321.1| ribonuclease III [Streptococcus mitis B6]
gi|288907619|emb|CBJ22456.1| ribonuclease III [Streptococcus mitis B6]
Length = 232
Score = 40.8 bits (94), Expect = 2.6, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVTIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|414877239|tpg|DAA54370.1| TPA: hypothetical protein ZEAMMB73_771334 [Zea mays]
Length = 399
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 18/22 (81%)
Query: 247 ENRDTSVLVRLRPAWEDLRSYL 268
E RD S LVRLRP WEDLRSYL
Sbjct: 373 EIRDISALVRLRPTWEDLRSYL 394
>gi|322387562|ref|ZP_08061171.1| ribonuclease III [Streptococcus infantis ATCC 700779]
gi|419843098|ref|ZP_14366422.1| ribonuclease III [Streptococcus infantis ATCC 700779]
gi|321141429|gb|EFX36925.1| ribonuclease III [Streptococcus infantis ATCC 700779]
gi|385703200|gb|EIG40326.1| ribonuclease III [Streptococcus infantis ATCC 700779]
Length = 232
Score = 40.8 bits (94), Expect = 2.7, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + + D F VEVL G+ +G G G+++K A+Q+AA+NA+
Sbjct: 183 SEIGPAHDKMFEVEVLVEGQSLGRGQGRSKKLAEQEAAKNAV 224
>gi|421277210|ref|ZP_15728030.1| ribonuclease III [Streptococcus mitis SPAR10]
gi|395876491|gb|EJG87567.1| ribonuclease III [Streptococcus mitis SPAR10]
Length = 232
Score = 40.8 bits (94), Expect = 2.7, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + + D F VEVL G+ +G G G+++K A+Q+AA+NA+
Sbjct: 183 SEIGPAHDKMFEVEVLVEGQSLGRGQGRSKKLAEQEAAKNAV 224
>gi|385260571|ref|ZP_10038715.1| ribonuclease III [Streptococcus sp. SK140]
gi|385191121|gb|EIF38545.1| ribonuclease III [Streptococcus sp. SK140]
Length = 232
Score = 40.8 bits (94), Expect = 2.7, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + + D F VEVL G+ +G G G+++K A+Q+AA+NA+
Sbjct: 183 SEIGPAHDKMFEVEVLVEGQSLGSGKGRSKKLAEQEAAKNAV 224
>gi|417914953|ref|ZP_12558583.1| ribonuclease III [Streptococcus mitis bv. 2 str. SK95]
gi|342835607|gb|EGU69843.1| ribonuclease III [Streptococcus mitis bv. 2 str. SK95]
Length = 232
Score = 40.8 bits (94), Expect = 2.7, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + + D F VEVL G+ IG G G+++K A+Q+AA+NA+
Sbjct: 183 SEIGPAHDKVFDVEVLVEGKSIGKGQGRSKKLAEQEAAKNAV 224
>gi|421243175|ref|ZP_15699694.1| ribonuclease III [Streptococcus pneumoniae 2081074]
gi|395608763|gb|EJG68855.1| ribonuclease III [Streptococcus pneumoniae 2081074]
Length = 232
Score = 40.8 bits (94), Expect = 2.7, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTYLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|421217836|ref|ZP_15674734.1| ribonuclease III [Streptococcus pneumoniae 2070335]
gi|395583910|gb|EJG44335.1| ribonuclease III [Streptococcus pneumoniae 2070335]
Length = 187
Score = 40.8 bits (94), Expect = 2.7, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 106 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 165
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 166 SKKLAEQEAAKNAV 179
>gi|15901109|ref|NP_345713.1| ribonuclease III [Streptococcus pneumoniae TIGR4]
gi|111658429|ref|ZP_01409108.1| hypothetical protein SpneT_02000400 [Streptococcus pneumoniae
TIGR4]
gi|419482279|ref|ZP_14022070.1| ribonuclease III [Streptococcus pneumoniae GA40563]
gi|421247506|ref|ZP_15703992.1| ribonuclease III [Streptococcus pneumoniae 2082170]
gi|22654070|sp|Q97QG6.1|RNC_STRPN RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|14972730|gb|AAK75353.1| ribonuclease III [Streptococcus pneumoniae TIGR4]
gi|379579819|gb|EHZ44716.1| ribonuclease III [Streptococcus pneumoniae GA40563]
gi|395614327|gb|EJG74348.1| ribonuclease III [Streptococcus pneumoniae 2082170]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|405760786|ref|YP_006701382.1| ribonuclease III [Streptococcus pneumoniae SPNA45]
gi|404277675|emb|CCM08218.1| ribonuclease III [Streptococcus pneumoniae SPNA45]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|421285602|ref|ZP_15736379.1| ribonuclease III [Streptococcus pneumoniae GA60190]
gi|395887581|gb|EJG98596.1| ribonuclease III [Streptococcus pneumoniae GA60190]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTYLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|421240779|ref|ZP_15697324.1| ribonuclease III [Streptococcus pneumoniae 2080913]
gi|395607157|gb|EJG67254.1| ribonuclease III [Streptococcus pneumoniae 2080913]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|383939627|ref|ZP_09992781.1| ribonuclease III [Streptococcus pseudopneumoniae SK674]
gi|418973026|ref|ZP_13521068.1| ribonuclease III [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383350582|gb|EID28447.1| ribonuclease III [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383712463|gb|EID69515.1| ribonuclease III [Streptococcus pseudopneumoniae SK674]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|418146451|ref|ZP_12783231.1| ribonuclease III [Streptococcus pneumoniae GA13637]
gi|353813659|gb|EHD93887.1| ribonuclease III [Streptococcus pneumoniae GA13637]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|418148647|ref|ZP_12785412.1| ribonuclease III [Streptococcus pneumoniae GA13856]
gi|418200143|ref|ZP_12836588.1| ribonuclease III [Streptococcus pneumoniae GA47976]
gi|419523501|ref|ZP_14063079.1| ribonuclease III [Streptococcus pneumoniae GA13723]
gi|353813322|gb|EHD93555.1| ribonuclease III [Streptococcus pneumoniae GA13856]
gi|353865190|gb|EHE45099.1| ribonuclease III [Streptococcus pneumoniae GA47976]
gi|379557418|gb|EHZ22463.1| ribonuclease III [Streptococcus pneumoniae GA13723]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTYLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|322376803|ref|ZP_08051296.1| ribonuclease III [Streptococcus sp. M334]
gi|321282610|gb|EFX59617.1| ribonuclease III [Streptococcus sp. M334]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|168493169|ref|ZP_02717312.1| ribonuclease III [Streptococcus pneumoniae CDC3059-06]
gi|418074019|ref|ZP_12711275.1| ribonuclease III [Streptococcus pneumoniae GA11184]
gi|418078713|ref|ZP_12715936.1| ribonuclease III [Streptococcus pneumoniae 4027-06]
gi|418080686|ref|ZP_12717898.1| ribonuclease III [Streptococcus pneumoniae 6735-05]
gi|418086947|ref|ZP_12724117.1| ribonuclease III [Streptococcus pneumoniae GA47033]
gi|418089620|ref|ZP_12726776.1| ribonuclease III [Streptococcus pneumoniae GA43265]
gi|418098594|ref|ZP_12735693.1| ribonuclease III [Streptococcus pneumoniae 6901-05]
gi|418105312|ref|ZP_12742370.1| ribonuclease III [Streptococcus pneumoniae GA44500]
gi|418114792|ref|ZP_12751780.1| ribonuclease III [Streptococcus pneumoniae 5787-06]
gi|418116958|ref|ZP_12753928.1| ribonuclease III [Streptococcus pneumoniae 6963-05]
gi|418130403|ref|ZP_12767287.1| ribonuclease III [Streptococcus pneumoniae GA07643]
gi|418135286|ref|ZP_12772142.1| ribonuclease III [Streptococcus pneumoniae GA11426]
gi|418173607|ref|ZP_12810220.1| ribonuclease III [Streptococcus pneumoniae GA41277]
gi|418182861|ref|ZP_12819421.1| ribonuclease III [Streptococcus pneumoniae GA43380]
gi|418187250|ref|ZP_12823777.1| ribonuclease III [Streptococcus pneumoniae GA47360]
gi|418216676|ref|ZP_12843399.1| ribonuclease III [Streptococcus pneumoniae Netherlands15B-37]
gi|418229988|ref|ZP_12856591.1| ribonuclease III [Streptococcus pneumoniae EU-NP01]
gi|419431632|ref|ZP_13971772.1| ribonuclease III [Streptococcus pneumoniae EU-NP05]
gi|419434348|ref|ZP_13974465.1| ribonuclease III [Streptococcus pneumoniae GA40183]
gi|419440451|ref|ZP_13980499.1| ribonuclease III [Streptococcus pneumoniae GA40410]
gi|419455628|ref|ZP_13995586.1| ribonuclease III [Streptococcus pneumoniae EU-NP04]
gi|419464547|ref|ZP_14004439.1| ribonuclease III [Streptococcus pneumoniae GA04175]
gi|419469086|ref|ZP_14008957.1| ribonuclease III [Streptococcus pneumoniae GA06083]
gi|419477902|ref|ZP_14017726.1| ribonuclease III [Streptococcus pneumoniae GA18068]
gi|419497409|ref|ZP_14037118.1| ribonuclease III [Streptococcus pneumoniae GA47522]
gi|419534718|ref|ZP_14074219.1| ribonuclease III [Streptococcus pneumoniae GA17457]
gi|421270670|ref|ZP_15721525.1| ribonuclease III [Streptococcus pneumoniae SPAR48]
gi|421281209|ref|ZP_15732007.1| ribonuclease III [Streptococcus pneumoniae GA04672]
gi|421307562|ref|ZP_15758205.1| ribonuclease III [Streptococcus pneumoniae GA60132]
gi|421309660|ref|ZP_15760287.1| ribonuclease III [Streptococcus pneumoniae GA62681]
gi|183576640|gb|EDT97168.1| ribonuclease III [Streptococcus pneumoniae CDC3059-06]
gi|353747904|gb|EHD28560.1| ribonuclease III [Streptococcus pneumoniae 4027-06]
gi|353749519|gb|EHD30163.1| ribonuclease III [Streptococcus pneumoniae GA11184]
gi|353753226|gb|EHD33850.1| ribonuclease III [Streptococcus pneumoniae 6735-05]
gi|353759208|gb|EHD39794.1| ribonuclease III [Streptococcus pneumoniae GA47033]
gi|353761618|gb|EHD42184.1| ribonuclease III [Streptococcus pneumoniae GA43265]
gi|353769954|gb|EHD50470.1| ribonuclease III [Streptococcus pneumoniae 6901-05]
gi|353777377|gb|EHD57850.1| ribonuclease III [Streptococcus pneumoniae GA44500]
gi|353786305|gb|EHD66718.1| ribonuclease III [Streptococcus pneumoniae 5787-06]
gi|353789319|gb|EHD69714.1| ribonuclease III [Streptococcus pneumoniae 6963-05]
gi|353803695|gb|EHD83987.1| ribonuclease III [Streptococcus pneumoniae GA07643]
gi|353838424|gb|EHE18502.1| ribonuclease III [Streptococcus pneumoniae GA41277]
gi|353849002|gb|EHE29012.1| ribonuclease III [Streptococcus pneumoniae GA43380]
gi|353851544|gb|EHE31536.1| ribonuclease III [Streptococcus pneumoniae GA47360]
gi|353872268|gb|EHE52134.1| ribonuclease III [Streptococcus pneumoniae Netherlands15B-37]
gi|353887510|gb|EHE67288.1| ribonuclease III [Streptococcus pneumoniae EU-NP01]
gi|353901434|gb|EHE76976.1| ribonuclease III [Streptococcus pneumoniae GA11426]
gi|379537581|gb|EHZ02763.1| ribonuclease III [Streptococcus pneumoniae GA04175]
gi|379547189|gb|EHZ12327.1| ribonuclease III [Streptococcus pneumoniae GA06083]
gi|379564066|gb|EHZ29063.1| ribonuclease III [Streptococcus pneumoniae GA17457]
gi|379565338|gb|EHZ30330.1| ribonuclease III [Streptococcus pneumoniae GA18068]
gi|379575732|gb|EHZ40662.1| ribonuclease III [Streptococcus pneumoniae GA40183]
gi|379578591|gb|EHZ43500.1| ribonuclease III [Streptococcus pneumoniae GA40410]
gi|379600878|gb|EHZ65657.1| ribonuclease III [Streptococcus pneumoniae GA47522]
gi|379628762|gb|EHZ93364.1| ribonuclease III [Streptococcus pneumoniae EU-NP04]
gi|379630199|gb|EHZ94789.1| ribonuclease III [Streptococcus pneumoniae EU-NP05]
gi|395867799|gb|EJG78919.1| ribonuclease III [Streptococcus pneumoniae SPAR48]
gi|395882370|gb|EJG93417.1| ribonuclease III [Streptococcus pneumoniae GA04672]
gi|395907475|gb|EJH18366.1| ribonuclease III [Streptococcus pneumoniae GA60132]
gi|395911081|gb|EJH21950.1| ribonuclease III [Streptococcus pneumoniae GA62681]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTYLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|148993857|ref|ZP_01823259.1| ribonuclease III [Streptococcus pneumoniae SP9-BS68]
gi|149007089|ref|ZP_01830758.1| ribonuclease III [Streptococcus pneumoniae SP18-BS74]
gi|149012300|ref|ZP_01833369.1| ribonuclease III [Streptococcus pneumoniae SP19-BS75]
gi|149019239|ref|ZP_01834601.1| ribonuclease III [Streptococcus pneumoniae SP23-BS72]
gi|168486568|ref|ZP_02711076.1| ribonuclease III [Streptococcus pneumoniae CDC1087-00]
gi|168489075|ref|ZP_02713274.1| ribonuclease III [Streptococcus pneumoniae SP195]
gi|182684025|ref|YP_001835772.1| ribonuclease III [Streptococcus pneumoniae CGSP14]
gi|225854713|ref|YP_002736225.1| ribonuclease III [Streptococcus pneumoniae JJA]
gi|225859042|ref|YP_002740552.1| ribonuclease III [Streptococcus pneumoniae 70585]
gi|303254257|ref|ZP_07340366.1| ribonuclease III [Streptococcus pneumoniae BS455]
gi|303258883|ref|ZP_07344862.1| ribonuclease III [Streptococcus pneumoniae SP-BS293]
gi|303261566|ref|ZP_07347513.1| ribonuclease III [Streptococcus pneumoniae SP14-BS292]
gi|303264237|ref|ZP_07350157.1| ribonuclease III [Streptococcus pneumoniae BS397]
gi|303266132|ref|ZP_07352025.1| ribonuclease III [Streptococcus pneumoniae BS457]
gi|303268141|ref|ZP_07353941.1| ribonuclease III [Streptococcus pneumoniae BS458]
gi|307127162|ref|YP_003879193.1| ribonuclease III [Streptococcus pneumoniae 670-6B]
gi|387759308|ref|YP_006066286.1| ribonuclease III [Streptococcus pneumoniae INV200]
gi|410476655|ref|YP_006743414.1| ribonuclease III [Streptococcus pneumoniae gamPNI0373]
gi|417676982|ref|ZP_12326391.1| ribonuclease III [Streptococcus pneumoniae GA17545]
gi|417679207|ref|ZP_12328604.1| ribonuclease III [Streptococcus pneumoniae GA17570]
gi|418094054|ref|ZP_12731181.1| ribonuclease III [Streptococcus pneumoniae GA49138]
gi|418096336|ref|ZP_12733449.1| ribonuclease III [Streptococcus pneumoniae GA16531]
gi|418102961|ref|ZP_12740035.1| ribonuclease III [Streptococcus pneumoniae NP070]
gi|418112591|ref|ZP_12749591.1| ribonuclease III [Streptococcus pneumoniae GA41538]
gi|418125884|ref|ZP_12762792.1| ribonuclease III [Streptococcus pneumoniae GA44511]
gi|418132058|ref|ZP_12768933.1| ribonuclease III [Streptococcus pneumoniae GA11304]
gi|418139526|ref|ZP_12776353.1| ribonuclease III [Streptococcus pneumoniae GA13338]
gi|418141807|ref|ZP_12778620.1| ribonuclease III [Streptococcus pneumoniae GA13455]
gi|418152964|ref|ZP_12789703.1| ribonuclease III [Streptococcus pneumoniae GA16121]
gi|418155239|ref|ZP_12791968.1| ribonuclease III [Streptococcus pneumoniae GA16242]
gi|418164556|ref|ZP_12801226.1| ribonuclease III [Streptococcus pneumoniae GA17371]
gi|418180639|ref|ZP_12817209.1| ribonuclease III [Streptococcus pneumoniae GA41688]
gi|418185047|ref|ZP_12821591.1| ribonuclease III [Streptococcus pneumoniae GA47283]
gi|418191800|ref|ZP_12828303.1| ribonuclease III [Streptococcus pneumoniae GA47388]
gi|418214431|ref|ZP_12841166.1| ribonuclease III [Streptococcus pneumoniae GA54644]
gi|418225636|ref|ZP_12852264.1| ribonuclease III [Streptococcus pneumoniae NP112]
gi|418234444|ref|ZP_12861022.1| ribonuclease III [Streptococcus pneumoniae GA08780]
gi|419466647|ref|ZP_14006530.1| ribonuclease III [Streptococcus pneumoniae GA05248]
gi|419475625|ref|ZP_14015465.1| ribonuclease III [Streptococcus pneumoniae GA14688]
gi|419484472|ref|ZP_14024248.1| ribonuclease III [Streptococcus pneumoniae GA43257]
gi|419486779|ref|ZP_14026543.1| ribonuclease III [Streptococcus pneumoniae GA44128]
gi|419493399|ref|ZP_14033125.1| ribonuclease III [Streptococcus pneumoniae GA47210]
gi|419508315|ref|ZP_14047968.1| ribonuclease III [Streptococcus pneumoniae GA49542]
gi|419509825|ref|ZP_14049469.1| ribonuclease III [Streptococcus pneumoniae NP141]
gi|419514656|ref|ZP_14054281.1| ribonuclease III [Streptococcus pneumoniae England14-9]
gi|419516870|ref|ZP_14056486.1| ribonuclease III [Streptococcus pneumoniae GA02506]
gi|419519010|ref|ZP_14058616.1| ribonuclease III [Streptococcus pneumoniae GA08825]
gi|419530129|ref|ZP_14069660.1| ribonuclease III [Streptococcus pneumoniae GA40028]
gi|421209085|ref|ZP_15666100.1| ribonuclease III [Streptococcus pneumoniae 2070005]
gi|421213299|ref|ZP_15670256.1| ribonuclease III [Streptococcus pneumoniae 2070108]
gi|421215545|ref|ZP_15672466.1| ribonuclease III [Streptococcus pneumoniae 2070109]
gi|421220397|ref|ZP_15677241.1| ribonuclease III [Streptococcus pneumoniae 2070425]
gi|421222707|ref|ZP_15679493.1| ribonuclease III [Streptococcus pneumoniae 2070531]
gi|421225122|ref|ZP_15681862.1| ribonuclease III [Streptococcus pneumoniae 2070768]
gi|421234222|ref|ZP_15690842.1| ribonuclease III [Streptococcus pneumoniae 2061617]
gi|421249533|ref|ZP_15705991.1| ribonuclease III [Streptococcus pneumoniae 2082239]
gi|421268539|ref|ZP_15719409.1| ribonuclease III [Streptococcus pneumoniae SPAR95]
gi|421279023|ref|ZP_15729830.1| ribonuclease III [Streptococcus pneumoniae GA17301]
gi|421289847|ref|ZP_15740598.1| ribonuclease III [Streptococcus pneumoniae GA54354]
gi|421294113|ref|ZP_15744836.1| ribonuclease III [Streptococcus pneumoniae GA56113]
gi|421295927|ref|ZP_15746639.1| ribonuclease III [Streptococcus pneumoniae GA58581]
gi|421301110|ref|ZP_15751780.1| ribonuclease III [Streptococcus pneumoniae GA19998]
gi|421305166|ref|ZP_15755822.1| ribonuclease III [Streptococcus pneumoniae GA62331]
gi|444388194|ref|ZP_21186184.1| ribonuclease III [Streptococcus pneumoniae PCS125219]
gi|444389638|ref|ZP_21187553.1| ribonuclease III [Streptococcus pneumoniae PCS70012]
gi|444391946|ref|ZP_21189707.1| ribonuclease III [Streptococcus pneumoniae PCS81218]
gi|444395175|ref|ZP_21192721.1| ribonuclease III [Streptococcus pneumoniae PNI0002]
gi|444397700|ref|ZP_21195183.1| ribonuclease III [Streptococcus pneumoniae PNI0006]
gi|444400182|ref|ZP_21197598.1| ribonuclease III [Streptococcus pneumoniae PNI0007]
gi|444402660|ref|ZP_21199818.1| ribonuclease III [Streptococcus pneumoniae PNI0008]
gi|444404707|ref|ZP_21201652.1| ribonuclease III [Streptococcus pneumoniae PNI0009]
gi|444407320|ref|ZP_21203987.1| ribonuclease III [Streptococcus pneumoniae PNI0010]
gi|444416966|ref|ZP_21213031.1| ribonuclease III [Streptococcus pneumoniae PNI0360]
gi|444419213|ref|ZP_21215091.1| ribonuclease III [Streptococcus pneumoniae PNI0427]
gi|238691158|sp|B2IPN5.1|RNC_STRPS RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|254807901|sp|C1C7M6.1|RNC_STRP7 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|254807904|sp|C1CEK4.1|RNC_STRZJ RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|147761393|gb|EDK68359.1| ribonuclease III [Streptococcus pneumoniae SP18-BS74]
gi|147763626|gb|EDK70561.1| ribonuclease III [Streptococcus pneumoniae SP19-BS75]
gi|147927682|gb|EDK78707.1| ribonuclease III [Streptococcus pneumoniae SP9-BS68]
gi|147931109|gb|EDK82088.1| ribonuclease III [Streptococcus pneumoniae SP23-BS72]
gi|182629359|gb|ACB90307.1| ribonuclease III [Streptococcus pneumoniae CGSP14]
gi|183570477|gb|EDT91005.1| ribonuclease III [Streptococcus pneumoniae CDC1087-00]
gi|183572564|gb|EDT93092.1| ribonuclease III [Streptococcus pneumoniae SP195]
gi|225722013|gb|ACO17867.1| ribonuclease III [Streptococcus pneumoniae 70585]
gi|225722854|gb|ACO18707.1| ribonuclease III [Streptococcus pneumoniae JJA]
gi|301801897|emb|CBW34621.1| ribonuclease III [Streptococcus pneumoniae INV200]
gi|302598751|gb|EFL65788.1| ribonuclease III [Streptococcus pneumoniae BS455]
gi|302637146|gb|EFL67634.1| ribonuclease III [Streptococcus pneumoniae SP14-BS292]
gi|302639826|gb|EFL70282.1| ribonuclease III [Streptococcus pneumoniae SP-BS293]
gi|302642358|gb|EFL72705.1| ribonuclease III [Streptococcus pneumoniae BS458]
gi|302644302|gb|EFL74556.1| ribonuclease III [Streptococcus pneumoniae BS457]
gi|302646049|gb|EFL76276.1| ribonuclease III [Streptococcus pneumoniae BS397]
gi|306484224|gb|ADM91093.1| ribonuclease III [Streptococcus pneumoniae 670-6B]
gi|332073586|gb|EGI84065.1| ribonuclease III [Streptococcus pneumoniae GA17570]
gi|332074581|gb|EGI85055.1| ribonuclease III [Streptococcus pneumoniae GA17545]
gi|353764550|gb|EHD45098.1| ribonuclease III [Streptococcus pneumoniae GA49138]
gi|353769340|gb|EHD49858.1| ribonuclease III [Streptococcus pneumoniae GA16531]
gi|353775594|gb|EHD56074.1| ribonuclease III [Streptococcus pneumoniae NP070]
gi|353782953|gb|EHD63382.1| ribonuclease III [Streptococcus pneumoniae GA41538]
gi|353796665|gb|EHD77004.1| ribonuclease III [Streptococcus pneumoniae GA44511]
gi|353806058|gb|EHD86332.1| ribonuclease III [Streptococcus pneumoniae GA13455]
gi|353807724|gb|EHD87993.1| ribonuclease III [Streptococcus pneumoniae GA11304]
gi|353817515|gb|EHD97717.1| ribonuclease III [Streptococcus pneumoniae GA16121]
gi|353820617|gb|EHE00800.1| ribonuclease III [Streptococcus pneumoniae GA16242]
gi|353829417|gb|EHE09548.1| ribonuclease III [Streptococcus pneumoniae GA17371]
gi|353845341|gb|EHE25383.1| ribonuclease III [Streptococcus pneumoniae GA41688]
gi|353849366|gb|EHE29372.1| ribonuclease III [Streptococcus pneumoniae GA47283]
gi|353856873|gb|EHE36840.1| ribonuclease III [Streptococcus pneumoniae GA47388]
gi|353871714|gb|EHE51585.1| ribonuclease III [Streptococcus pneumoniae GA54644]
gi|353880833|gb|EHE60647.1| ribonuclease III [Streptococcus pneumoniae NP112]
gi|353887735|gb|EHE67512.1| ribonuclease III [Streptococcus pneumoniae GA08780]
gi|353905386|gb|EHE80821.1| ribonuclease III [Streptococcus pneumoniae GA13338]
gi|379544770|gb|EHZ09914.1| ribonuclease III [Streptococcus pneumoniae GA05248]
gi|379561170|gb|EHZ26191.1| ribonuclease III [Streptococcus pneumoniae GA14688]
gi|379574869|gb|EHZ39807.1| ribonuclease III [Streptococcus pneumoniae GA40028]
gi|379583983|gb|EHZ48860.1| ribonuclease III [Streptococcus pneumoniae GA43257]
gi|379586488|gb|EHZ51339.1| ribonuclease III [Streptococcus pneumoniae GA44128]
gi|379593574|gb|EHZ58386.1| ribonuclease III [Streptococcus pneumoniae GA47210]
gi|379612033|gb|EHZ76755.1| ribonuclease III [Streptococcus pneumoniae GA49542]
gi|379633018|gb|EHZ97587.1| ribonuclease III [Streptococcus pneumoniae NP141]
gi|379635205|gb|EHZ99763.1| ribonuclease III [Streptococcus pneumoniae England14-9]
gi|379638943|gb|EIA03487.1| ribonuclease III [Streptococcus pneumoniae GA02506]
gi|379640847|gb|EIA05385.1| ribonuclease III [Streptococcus pneumoniae GA08825]
gi|395574147|gb|EJG34729.1| ribonuclease III [Streptococcus pneumoniae 2070005]
gi|395579531|gb|EJG40029.1| ribonuclease III [Streptococcus pneumoniae 2070108]
gi|395579752|gb|EJG40247.1| ribonuclease III [Streptococcus pneumoniae 2070109]
gi|395587513|gb|EJG47860.1| ribonuclease III [Streptococcus pneumoniae 2070425]
gi|395587769|gb|EJG48111.1| ribonuclease III [Streptococcus pneumoniae 2070531]
gi|395589817|gb|EJG50133.1| ribonuclease III [Streptococcus pneumoniae 2070768]
gi|395601170|gb|EJG61319.1| ribonuclease III [Streptococcus pneumoniae 2061617]
gi|395613877|gb|EJG73902.1| ribonuclease III [Streptococcus pneumoniae 2082239]
gi|395870034|gb|EJG81148.1| ribonuclease III [Streptococcus pneumoniae SPAR95]
gi|395879635|gb|EJG90692.1| ribonuclease III [Streptococcus pneumoniae GA17301]
gi|395889088|gb|EJH00099.1| ribonuclease III [Streptococcus pneumoniae GA54354]
gi|395894403|gb|EJH05383.1| ribonuclease III [Streptococcus pneumoniae GA56113]
gi|395897140|gb|EJH08104.1| ribonuclease III [Streptococcus pneumoniae GA58581]
gi|395898670|gb|EJH09614.1| ribonuclease III [Streptococcus pneumoniae GA19998]
gi|395905828|gb|EJH16733.1| ribonuclease III [Streptococcus pneumoniae GA62331]
gi|406369600|gb|AFS43290.1| ribonuclease III [Streptococcus pneumoniae gamPNI0373]
gi|444250344|gb|ELU56825.1| ribonuclease III [Streptococcus pneumoniae PCS125219]
gi|444256101|gb|ELU62439.1| ribonuclease III [Streptococcus pneumoniae PCS70012]
gi|444258494|gb|ELU64816.1| ribonuclease III [Streptococcus pneumoniae PNI0002]
gi|444260357|gb|ELU66665.1| ribonuclease III [Streptococcus pneumoniae PNI0006]
gi|444264202|gb|ELU70303.1| ribonuclease III [Streptococcus pneumoniae PCS81218]
gi|444266147|gb|ELU72118.1| ribonuclease III [Streptococcus pneumoniae PNI0008]
gi|444267040|gb|ELU72960.1| ribonuclease III [Streptococcus pneumoniae PNI0007]
gi|444270916|gb|ELU76667.1| ribonuclease III [Streptococcus pneumoniae PNI0010]
gi|444276329|gb|ELU81895.1| ribonuclease III [Streptococcus pneumoniae PNI0009]
gi|444284727|gb|ELU89844.1| ribonuclease III [Streptococcus pneumoniae PNI0360]
gi|444287260|gb|ELU92193.1| ribonuclease III [Streptococcus pneumoniae PNI0427]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|418966604|ref|ZP_13518330.1| ribonuclease III [Streptococcus mitis SK616]
gi|383346814|gb|EID24828.1| ribonuclease III [Streptococcus mitis SK616]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFEVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|342163889|ref|YP_004768528.1| ribonuclease III [Streptococcus pseudopneumoniae IS7493]
gi|341933771|gb|AEL10668.1| ribonuclease III [Streptococcus pseudopneumoniae IS7493]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|307704936|ref|ZP_07641827.1| ribonuclease III [Streptococcus mitis SK597]
gi|307621550|gb|EFO00596.1| ribonuclease III [Streptococcus mitis SK597]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|225860919|ref|YP_002742428.1| ribonuclease III [Streptococcus pneumoniae Taiwan19F-14]
gi|298229966|ref|ZP_06963647.1| ribonuclease III [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254343|ref|ZP_06977929.1| ribonuclease III [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502755|ref|YP_003724695.1| ribonuclease III [Streptococcus pneumoniae TCH8431/19A]
gi|387788118|ref|YP_006253186.1| ribonuclease III [Streptococcus pneumoniae ST556]
gi|417312775|ref|ZP_12099487.1| ribonuclease III [Streptococcus pneumoniae GA04375]
gi|418083148|ref|ZP_12720347.1| ribonuclease III [Streptococcus pneumoniae GA44288]
gi|418085289|ref|ZP_12722471.1| ribonuclease III [Streptococcus pneumoniae GA47281]
gi|418100278|ref|ZP_12737366.1| ribonuclease III [Streptococcus pneumoniae 7286-06]
gi|418119953|ref|ZP_12756904.1| ribonuclease III [Streptococcus pneumoniae GA18523]
gi|418150704|ref|ZP_12787452.1| ribonuclease III [Streptococcus pneumoniae GA14798]
gi|418171175|ref|ZP_12807802.1| ribonuclease III [Streptococcus pneumoniae GA19451]
gi|418195455|ref|ZP_12831935.1| ribonuclease III [Streptococcus pneumoniae GA47688]
gi|418198049|ref|ZP_12834510.1| ribonuclease III [Streptococcus pneumoniae GA47778]
gi|418223282|ref|ZP_12849923.1| ribonuclease III [Streptococcus pneumoniae 5185-06]
gi|418227807|ref|ZP_12854425.1| ribonuclease III [Streptococcus pneumoniae 3063-00]
gi|419425244|ref|ZP_13965441.1| ribonuclease III [Streptococcus pneumoniae 7533-05]
gi|419427195|ref|ZP_13967378.1| ribonuclease III [Streptococcus pneumoniae 5652-06]
gi|419429372|ref|ZP_13969539.1| ribonuclease III [Streptococcus pneumoniae GA11856]
gi|419436089|ref|ZP_13976179.1| ribonuclease III [Streptococcus pneumoniae 8190-05]
gi|419438322|ref|ZP_13978392.1| ribonuclease III [Streptococcus pneumoniae GA13499]
gi|419444572|ref|ZP_13984587.1| ribonuclease III [Streptococcus pneumoniae GA19923]
gi|419446704|ref|ZP_13986709.1| ribonuclease III [Streptococcus pneumoniae 7879-04]
gi|419448854|ref|ZP_13988851.1| ribonuclease III [Streptococcus pneumoniae 4075-00]
gi|419451557|ref|ZP_13991543.1| ribonuclease III [Streptococcus pneumoniae EU-NP02]
gi|419501952|ref|ZP_14041636.1| ribonuclease III [Streptococcus pneumoniae GA47628]
gi|419528630|ref|ZP_14068172.1| ribonuclease III [Streptococcus pneumoniae GA17719]
gi|421236367|ref|ZP_15692965.1| ribonuclease III [Streptococcus pneumoniae 2071004]
gi|421287445|ref|ZP_15738211.1| ribonuclease III [Streptococcus pneumoniae GA58771]
gi|254807906|sp|C1CR56.1|RNC_STRZT RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|225726586|gb|ACO22437.1| ribonuclease III [Streptococcus pneumoniae Taiwan19F-14]
gi|298238350|gb|ADI69481.1| ribonuclease III [Streptococcus pneumoniae TCH8431/19A]
gi|327389483|gb|EGE87828.1| ribonuclease III [Streptococcus pneumoniae GA04375]
gi|353755224|gb|EHD35829.1| ribonuclease III [Streptococcus pneumoniae GA44288]
gi|353757244|gb|EHD37838.1| ribonuclease III [Streptococcus pneumoniae GA47281]
gi|353772987|gb|EHD53486.1| ribonuclease III [Streptococcus pneumoniae 7286-06]
gi|353789066|gb|EHD69462.1| ribonuclease III [Streptococcus pneumoniae GA18523]
gi|353815130|gb|EHD95351.1| ribonuclease III [Streptococcus pneumoniae GA14798]
gi|353837345|gb|EHE17431.1| ribonuclease III [Streptococcus pneumoniae GA19451]
gi|353861982|gb|EHE41915.1| ribonuclease III [Streptococcus pneumoniae GA47688]
gi|353863431|gb|EHE43359.1| ribonuclease III [Streptococcus pneumoniae GA47778]
gi|353879408|gb|EHE59234.1| ribonuclease III [Streptococcus pneumoniae 5185-06]
gi|353882035|gb|EHE61847.1| ribonuclease III [Streptococcus pneumoniae 3063-00]
gi|379137860|gb|AFC94651.1| ribonuclease III [Streptococcus pneumoniae ST556]
gi|379538327|gb|EHZ03508.1| ribonuclease III [Streptococcus pneumoniae GA13499]
gi|379551320|gb|EHZ16415.1| ribonuclease III [Streptococcus pneumoniae GA11856]
gi|379564653|gb|EHZ29649.1| ribonuclease III [Streptococcus pneumoniae GA17719]
gi|379572265|gb|EHZ37222.1| ribonuclease III [Streptococcus pneumoniae GA19923]
gi|379600165|gb|EHZ64946.1| ribonuclease III [Streptococcus pneumoniae GA47628]
gi|379614244|gb|EHZ78954.1| ribonuclease III [Streptococcus pneumoniae 7879-04]
gi|379615109|gb|EHZ79818.1| ribonuclease III [Streptococcus pneumoniae 8190-05]
gi|379618648|gb|EHZ83323.1| ribonuclease III [Streptococcus pneumoniae 5652-06]
gi|379619681|gb|EHZ84351.1| ribonuclease III [Streptococcus pneumoniae 7533-05]
gi|379623262|gb|EHZ87896.1| ribonuclease III [Streptococcus pneumoniae EU-NP02]
gi|379623912|gb|EHZ88545.1| ribonuclease III [Streptococcus pneumoniae 4075-00]
gi|395602212|gb|EJG62355.1| ribonuclease III [Streptococcus pneumoniae 2071004]
gi|395889854|gb|EJH00861.1| ribonuclease III [Streptococcus pneumoniae GA58771]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|421227452|ref|ZP_15684156.1| ribonuclease III [Streptococcus pneumoniae 2072047]
gi|395595154|gb|EJG55388.1| ribonuclease III [Streptococcus pneumoniae 2072047]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|169833544|ref|YP_001694678.1| ribonuclease III [Streptococcus pneumoniae Hungary19A-6]
gi|221231942|ref|YP_002511094.1| ribonuclease III [Streptococcus pneumoniae ATCC 700669]
gi|307706718|ref|ZP_07643523.1| ribonuclease III [Streptococcus mitis SK321]
gi|307709493|ref|ZP_07645950.1| ribonuclease III [Streptococcus mitis SK564]
gi|387626545|ref|YP_006062720.1| ribonuclease III [Streptococcus pneumoniae INV104]
gi|387757579|ref|YP_006064558.1| ribonuclease III [Streptococcus pneumoniae OXC141]
gi|415698831|ref|ZP_11457330.1| ribonuclease III [Streptococcus pneumoniae 459-5]
gi|415749607|ref|ZP_11477551.1| ribonuclease III [Streptococcus pneumoniae SV35]
gi|415752293|ref|ZP_11479404.1| ribonuclease III [Streptococcus pneumoniae SV36]
gi|417694159|ref|ZP_12343347.1| ribonuclease III [Streptococcus pneumoniae GA47901]
gi|417849433|ref|ZP_12495354.1| ribonuclease III [Streptococcus mitis SK1080]
gi|417924294|ref|ZP_12567740.1| ribonuclease III [Streptococcus mitis SK569]
gi|418123498|ref|ZP_12760431.1| ribonuclease III [Streptococcus pneumoniae GA44378]
gi|418128087|ref|ZP_12764982.1| ribonuclease III [Streptococcus pneumoniae NP170]
gi|418137270|ref|ZP_12774110.1| ribonuclease III [Streptococcus pneumoniae GA11663]
gi|418166884|ref|ZP_12803540.1| ribonuclease III [Streptococcus pneumoniae GA17971]
gi|418178262|ref|ZP_12814846.1| ribonuclease III [Streptococcus pneumoniae GA41565]
gi|418232282|ref|ZP_12858869.1| ribonuclease III [Streptococcus pneumoniae GA07228]
gi|418236743|ref|ZP_12863311.1| ribonuclease III [Streptococcus pneumoniae GA19690]
gi|419473287|ref|ZP_14013138.1| ribonuclease III [Streptococcus pneumoniae GA13430]
gi|419480130|ref|ZP_14019936.1| ribonuclease III [Streptococcus pneumoniae GA19101]
gi|419499826|ref|ZP_14039520.1| ribonuclease III [Streptococcus pneumoniae GA47597]
gi|419512596|ref|ZP_14052230.1| ribonuclease III [Streptococcus pneumoniae GA05578]
gi|421206709|ref|ZP_15663764.1| ribonuclease III [Streptococcus pneumoniae 2090008]
gi|421229884|ref|ZP_15686552.1| ribonuclease III [Streptococcus pneumoniae 2061376]
gi|421283397|ref|ZP_15734184.1| ribonuclease III [Streptococcus pneumoniae GA04216]
gi|421292162|ref|ZP_15742897.1| ribonuclease III [Streptococcus pneumoniae GA56348]
gi|421312094|ref|ZP_15762697.1| ribonuclease III [Streptococcus pneumoniae GA58981]
gi|444382056|ref|ZP_21180261.1| ribonuclease III [Streptococcus pneumoniae PCS8106]
gi|444384499|ref|ZP_21182593.1| ribonuclease III [Streptococcus pneumoniae PCS8203]
gi|238688328|sp|B1IC43.1|RNC_STRPI RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|254807902|sp|B8ZJR8.1|RNC_STRPJ RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|168996046|gb|ACA36658.1| ribonuclease III [Streptococcus pneumoniae Hungary19A-6]
gi|220674402|emb|CAR68952.1| ribonuclease III [Streptococcus pneumoniae ATCC 700669]
gi|301794330|emb|CBW36755.1| ribonuclease III [Streptococcus pneumoniae INV104]
gi|301800168|emb|CBW32773.1| ribonuclease III [Streptococcus pneumoniae OXC141]
gi|307617803|gb|EFN96965.1| ribonuclease III [Streptococcus mitis SK321]
gi|307619807|gb|EFN98926.1| ribonuclease III [Streptococcus mitis SK564]
gi|332203096|gb|EGJ17164.1| ribonuclease III [Streptococcus pneumoniae GA47901]
gi|339456311|gb|EGP68903.1| ribonuclease III [Streptococcus mitis SK1080]
gi|342836081|gb|EGU70304.1| ribonuclease III [Streptococcus mitis SK569]
gi|353796844|gb|EHD77182.1| ribonuclease III [Streptococcus pneumoniae GA44378]
gi|353799518|gb|EHD79836.1| ribonuclease III [Streptococcus pneumoniae NP170]
gi|353830480|gb|EHE10610.1| ribonuclease III [Streptococcus pneumoniae GA17971]
gi|353845036|gb|EHE25079.1| ribonuclease III [Streptococcus pneumoniae GA41565]
gi|353887009|gb|EHE66789.1| ribonuclease III [Streptococcus pneumoniae GA07228]
gi|353892975|gb|EHE72723.1| ribonuclease III [Streptococcus pneumoniae GA19690]
gi|353901261|gb|EHE76805.1| ribonuclease III [Streptococcus pneumoniae GA11663]
gi|379552794|gb|EHZ17883.1| ribonuclease III [Streptococcus pneumoniae GA13430]
gi|379570701|gb|EHZ35662.1| ribonuclease III [Streptococcus pneumoniae GA19101]
gi|379599134|gb|EHZ63917.1| ribonuclease III [Streptococcus pneumoniae GA47597]
gi|379637066|gb|EIA01624.1| ribonuclease III [Streptococcus pneumoniae GA05578]
gi|381309989|gb|EIC50822.1| ribonuclease III [Streptococcus pneumoniae SV36]
gi|381316703|gb|EIC57448.1| ribonuclease III [Streptococcus pneumoniae 459-5]
gi|381317901|gb|EIC58626.1| ribonuclease III [Streptococcus pneumoniae SV35]
gi|395575506|gb|EJG36074.1| ribonuclease III [Streptococcus pneumoniae 2090008]
gi|395595444|gb|EJG55676.1| ribonuclease III [Streptococcus pneumoniae 2061376]
gi|395881360|gb|EJG92409.1| ribonuclease III [Streptococcus pneumoniae GA04216]
gi|395892290|gb|EJH03281.1| ribonuclease III [Streptococcus pneumoniae GA56348]
gi|395910523|gb|EJH21395.1| ribonuclease III [Streptococcus pneumoniae GA58981]
gi|429316205|emb|CCP35874.1| ribonuclease III [Streptococcus pneumoniae SPN034156]
gi|429319547|emb|CCP32827.1| ribonuclease III [Streptococcus pneumoniae SPN034183]
gi|429321364|emb|CCP34801.1| ribonuclease III [Streptococcus pneumoniae SPN994039]
gi|429323184|emb|CCP30842.1| ribonuclease III [Streptococcus pneumoniae SPN994038]
gi|444252259|gb|ELU58723.1| ribonuclease III [Streptococcus pneumoniae PCS8203]
gi|444253655|gb|ELU60110.1| ribonuclease III [Streptococcus pneumoniae PCS8106]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|149002616|ref|ZP_01827548.1| ribonuclease III [Streptococcus pneumoniae SP14-BS69]
gi|168485011|ref|ZP_02709949.1| ribonuclease III [Streptococcus pneumoniae CDC1873-00]
gi|168491168|ref|ZP_02715311.1| ribonuclease III [Streptococcus pneumoniae CDC0288-04]
gi|225856914|ref|YP_002738425.1| ribonuclease III [Streptococcus pneumoniae P1031]
gi|237649948|ref|ZP_04524200.1| ribonuclease III [Streptococcus pneumoniae CCRI 1974]
gi|237822503|ref|ZP_04598348.1| ribonuclease III [Streptococcus pneumoniae CCRI 1974M2]
gi|417696436|ref|ZP_12345615.1| ribonuclease III [Streptococcus pneumoniae GA47368]
gi|417698650|ref|ZP_12347822.1| ribonuclease III [Streptococcus pneumoniae GA41317]
gi|418091874|ref|ZP_12729016.1| ribonuclease III [Streptococcus pneumoniae GA44452]
gi|418107669|ref|ZP_12744707.1| ribonuclease III [Streptococcus pneumoniae GA41410]
gi|418110218|ref|ZP_12747241.1| ribonuclease III [Streptococcus pneumoniae GA49447]
gi|418144084|ref|ZP_12780884.1| ribonuclease III [Streptococcus pneumoniae GA13494]
gi|418162305|ref|ZP_12798989.1| ribonuclease III [Streptococcus pneumoniae GA17328]
gi|418169269|ref|ZP_12805912.1| ribonuclease III [Streptococcus pneumoniae GA19077]
gi|418176059|ref|ZP_12812653.1| ribonuclease III [Streptococcus pneumoniae GA41437]
gi|418189477|ref|ZP_12825992.1| ribonuclease III [Streptococcus pneumoniae GA47373]
gi|418193858|ref|ZP_12830349.1| ribonuclease III [Streptococcus pneumoniae GA47439]
gi|418202484|ref|ZP_12838914.1| ribonuclease III [Streptococcus pneumoniae GA52306]
gi|418218986|ref|ZP_12845653.1| ribonuclease III [Streptococcus pneumoniae NP127]
gi|418221300|ref|ZP_12847953.1| ribonuclease III [Streptococcus pneumoniae GA47751]
gi|418238809|ref|ZP_12865362.1| ribonuclease III [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419423034|ref|ZP_13963249.1| ribonuclease III [Streptococcus pneumoniae GA43264]
gi|419443120|ref|ZP_13983146.1| ribonuclease III [Streptococcus pneumoniae GA13224]
gi|419453348|ref|ZP_13993321.1| ribonuclease III [Streptococcus pneumoniae EU-NP03]
gi|419457632|ref|ZP_13997576.1| ribonuclease III [Streptococcus pneumoniae GA02254]
gi|419460077|ref|ZP_14000007.1| ribonuclease III [Streptococcus pneumoniae GA02270]
gi|419462410|ref|ZP_14002316.1| ribonuclease III [Streptococcus pneumoniae GA02714]
gi|419488228|ref|ZP_14027981.1| ribonuclease III [Streptococcus pneumoniae GA44386]
gi|419495514|ref|ZP_14035232.1| ribonuclease III [Streptococcus pneumoniae GA47461]
gi|419506161|ref|ZP_14045822.1| ribonuclease III [Streptococcus pneumoniae GA49194]
gi|419525983|ref|ZP_14065545.1| ribonuclease III [Streptococcus pneumoniae GA14373]
gi|421272820|ref|ZP_15723662.1| ribonuclease III [Streptococcus pneumoniae SPAR55]
gi|421303415|ref|ZP_15754079.1| ribonuclease III [Streptococcus pneumoniae GA17484]
gi|444410049|ref|ZP_21206603.1| ribonuclease III [Streptococcus pneumoniae PNI0076]
gi|444413110|ref|ZP_21209426.1| ribonuclease III [Streptococcus pneumoniae PNI0153]
gi|444414819|ref|ZP_21211069.1| ribonuclease III [Streptococcus pneumoniae PNI0199]
gi|444423315|ref|ZP_21218930.1| ribonuclease III [Streptococcus pneumoniae PNI0446]
gi|254807905|sp|C1CKY7.1|RNC_STRZP RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|147759227|gb|EDK66220.1| ribonuclease III [Streptococcus pneumoniae SP14-BS69]
gi|172041872|gb|EDT49918.1| ribonuclease III [Streptococcus pneumoniae CDC1873-00]
gi|183574495|gb|EDT95023.1| ribonuclease III [Streptococcus pneumoniae CDC0288-04]
gi|225724496|gb|ACO20348.1| ribonuclease III [Streptococcus pneumoniae P1031]
gi|332200695|gb|EGJ14767.1| ribonuclease III [Streptococcus pneumoniae GA41317]
gi|332201711|gb|EGJ15781.1| ribonuclease III [Streptococcus pneumoniae GA47368]
gi|353763974|gb|EHD44524.1| ribonuclease III [Streptococcus pneumoniae GA44452]
gi|353779852|gb|EHD60316.1| ribonuclease III [Streptococcus pneumoniae GA41410]
gi|353782421|gb|EHD62855.1| ribonuclease III [Streptococcus pneumoniae GA49447]
gi|353809825|gb|EHD90085.1| ribonuclease III [Streptococcus pneumoniae GA13494]
gi|353827734|gb|EHE07883.1| ribonuclease III [Streptococcus pneumoniae GA17328]
gi|353834454|gb|EHE14555.1| ribonuclease III [Streptococcus pneumoniae GA19077]
gi|353841498|gb|EHE21553.1| ribonuclease III [Streptococcus pneumoniae GA41437]
gi|353856619|gb|EHE36588.1| ribonuclease III [Streptococcus pneumoniae GA47373]
gi|353859078|gb|EHE39033.1| ribonuclease III [Streptococcus pneumoniae GA47439]
gi|353868287|gb|EHE48177.1| ribonuclease III [Streptococcus pneumoniae GA52306]
gi|353874610|gb|EHE54464.1| ribonuclease III [Streptococcus pneumoniae GA47751]
gi|353875641|gb|EHE55493.1| ribonuclease III [Streptococcus pneumoniae NP127]
gi|353893211|gb|EHE72957.1| ribonuclease III [Streptococcus pneumoniae NorthCarolina6A-23]
gi|379531505|gb|EHY96739.1| ribonuclease III [Streptococcus pneumoniae GA02254]
gi|379531881|gb|EHY97114.1| ribonuclease III [Streptococcus pneumoniae GA02714]
gi|379532052|gb|EHY97284.1| ribonuclease III [Streptococcus pneumoniae GA02270]
gi|379550585|gb|EHZ15682.1| ribonuclease III [Streptococcus pneumoniae GA13224]
gi|379558243|gb|EHZ23279.1| ribonuclease III [Streptococcus pneumoniae GA14373]
gi|379587560|gb|EHZ52408.1| ribonuclease III [Streptococcus pneumoniae GA43264]
gi|379590343|gb|EHZ55181.1| ribonuclease III [Streptococcus pneumoniae GA44386]
gi|379595596|gb|EHZ60404.1| ribonuclease III [Streptococcus pneumoniae GA47461]
gi|379608075|gb|EHZ72821.1| ribonuclease III [Streptococcus pneumoniae GA49194]
gi|379627057|gb|EHZ91673.1| ribonuclease III [Streptococcus pneumoniae EU-NP03]
gi|395874474|gb|EJG85557.1| ribonuclease III [Streptococcus pneumoniae SPAR55]
gi|395902037|gb|EJH12973.1| ribonuclease III [Streptococcus pneumoniae GA17484]
gi|444273269|gb|ELU78942.1| ribonuclease III [Streptococcus pneumoniae PNI0153]
gi|444278358|gb|ELU83814.1| ribonuclease III [Streptococcus pneumoniae PNI0076]
gi|444281068|gb|ELU86403.1| ribonuclease III [Streptococcus pneumoniae PNI0199]
gi|444287192|gb|ELU92130.1| ribonuclease III [Streptococcus pneumoniae PNI0446]
Length = 232
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|307708796|ref|ZP_07645258.1| ribonuclease III [Streptococcus mitis NCTC 12261]
gi|307615162|gb|EFN94373.1| ribonuclease III [Streptococcus mitis NCTC 12261]
Length = 232
Score = 40.8 bits (94), Expect = 2.9, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFEVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|339254478|ref|XP_003372462.1| conserved hypothetical protein [Trichinella spiralis]
gi|316967111|gb|EFV51594.1| conserved hypothetical protein [Trichinella spiralis]
Length = 683
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVC 314
RLRP Y + K + FE+++ T R YA ++ ++LDP L G + +L R C
Sbjct: 272 TRLRP----YARYFLKKINEYFELHIITHGNRKYAEKVVKMLDPNNVLFGDR-ILSRDEC 326
Query: 315 VKSGSRK-SLLNVFQRGLCHPKMAMVIDDRCKVW 347
+ +L +F G + +IDDR VW
Sbjct: 327 FDPNMKAPNLKALFPGG---DDLVCIIDDREDVW 357
>gi|15903170|ref|NP_358720.1| ribonuclease III [Streptococcus pneumoniae R6]
gi|116517072|ref|YP_816576.1| ribonuclease III [Streptococcus pneumoniae D39]
gi|148989271|ref|ZP_01820651.1| ribonuclease III [Streptococcus pneumoniae SP6-BS73]
gi|148998680|ref|ZP_01826119.1| ribonuclease III [Streptococcus pneumoniae SP11-BS70]
gi|168575703|ref|ZP_02721618.1| ribonuclease III [Streptococcus pneumoniae MLV-016]
gi|194398097|ref|YP_002037848.1| ribonuclease III [Streptococcus pneumoniae G54]
gi|307067896|ref|YP_003876862.1| dsRNA-specific ribonuclease [Streptococcus pneumoniae AP200]
gi|418076390|ref|ZP_12713626.1| ribonuclease III [Streptococcus pneumoniae GA47502]
gi|418121287|ref|ZP_12758231.1| ribonuclease III [Streptococcus pneumoniae GA44194]
gi|419491133|ref|ZP_14030872.1| ribonuclease III [Streptococcus pneumoniae GA47179]
gi|419504025|ref|ZP_14043694.1| ribonuclease III [Streptococcus pneumoniae GA47760]
gi|419532439|ref|ZP_14071955.1| ribonuclease III [Streptococcus pneumoniae GA47794]
gi|421211313|ref|ZP_15668296.1| ribonuclease III [Streptococcus pneumoniae 2070035]
gi|421231988|ref|ZP_15688631.1| ribonuclease III [Streptococcus pneumoniae 2080076]
gi|421238858|ref|ZP_15695424.1| ribonuclease III [Streptococcus pneumoniae 2071247]
gi|421245135|ref|ZP_15701634.1| ribonuclease III [Streptococcus pneumoniae 2081685]
gi|421266264|ref|ZP_15717145.1| ribonuclease III [Streptococcus pneumoniae SPAR27]
gi|421274965|ref|ZP_15725795.1| ribonuclease III [Streptococcus pneumoniae GA52612]
gi|421313783|ref|ZP_15764373.1| ribonuclease III [Streptococcus pneumoniae GA47562]
gi|73917586|sp|Q8DPJ8.1|RNC_STRR6 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|122278538|sp|Q04K72.1|RNC_STRP2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|226741378|sp|B5E4Y2.1|RNC_STRP4 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|15458754|gb|AAK99930.1| Ribonuclease III [Streptococcus pneumoniae R6]
gi|116077648|gb|ABJ55368.1| ribonuclease III [Streptococcus pneumoniae D39]
gi|147755517|gb|EDK62565.1| ribonuclease III [Streptococcus pneumoniae SP11-BS70]
gi|147925249|gb|EDK76328.1| ribonuclease III [Streptococcus pneumoniae SP6-BS73]
gi|183578209|gb|EDT98737.1| ribonuclease III [Streptococcus pneumoniae MLV-016]
gi|194357764|gb|ACF56212.1| ribonuclease III [Streptococcus pneumoniae G54]
gi|306409433|gb|ADM84860.1| dsRNA-specific ribonuclease [Streptococcus pneumoniae AP200]
gi|353749091|gb|EHD29741.1| ribonuclease III [Streptococcus pneumoniae GA47502]
gi|353793189|gb|EHD73558.1| ribonuclease III [Streptococcus pneumoniae GA44194]
gi|379593269|gb|EHZ58082.1| ribonuclease III [Streptococcus pneumoniae GA47179]
gi|379606223|gb|EHZ70972.1| ribonuclease III [Streptococcus pneumoniae GA47794]
gi|379606702|gb|EHZ71449.1| ribonuclease III [Streptococcus pneumoniae GA47760]
gi|395573271|gb|EJG33862.1| ribonuclease III [Streptococcus pneumoniae 2070035]
gi|395595617|gb|EJG55847.1| ribonuclease III [Streptococcus pneumoniae 2080076]
gi|395601295|gb|EJG61443.1| ribonuclease III [Streptococcus pneumoniae 2071247]
gi|395608571|gb|EJG68664.1| ribonuclease III [Streptococcus pneumoniae 2081685]
gi|395867480|gb|EJG78603.1| ribonuclease III [Streptococcus pneumoniae SPAR27]
gi|395874076|gb|EJG85164.1| ribonuclease III [Streptococcus pneumoniae GA52612]
gi|395914283|gb|EJH25127.1| ribonuclease III [Streptococcus pneumoniae GA47562]
Length = 232
Score = 40.8 bits (94), Expect = 2.9, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|421298687|ref|ZP_15749375.1| ribonuclease III [Streptococcus pneumoniae GA60080]
gi|395902643|gb|EJH13576.1| ribonuclease III [Streptococcus pneumoniae GA60080]
Length = 232
Score = 40.8 bits (94), Expect = 2.9, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|419471171|ref|ZP_14011030.1| ribonuclease III [Streptococcus pneumoniae GA07914]
gi|379545887|gb|EHZ11026.1| ribonuclease III [Streptococcus pneumoniae GA07914]
Length = 232
Score = 40.8 bits (94), Expect = 3.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|339448388|ref|ZP_08651944.1| ribonuclease III [Lactobacillus fructivorans KCTC 3543]
Length = 235
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 653 DLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691
D +F V V G+++GVG+G ++KDA+Q+AA+ AL+ L
Sbjct: 191 DRKFKVAVKINGKEMGVGLGHSKKDAEQKAAKKALNELG 229
>gi|410658788|ref|YP_006911159.1| Ribonuclease III [Dehalobacter sp. DCA]
gi|410661777|ref|YP_006914148.1| Ribonuclease III [Dehalobacter sp. CF]
gi|409021143|gb|AFV03174.1| Ribonuclease III [Dehalobacter sp. DCA]
gi|409024133|gb|AFV06163.1| Ribonuclease III [Dehalobacter sp. CF]
Length = 248
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 630 VLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
+LQE ++ +V +R + T D +F+ V GE G G+GKT+K+A+QQAA AL
Sbjct: 184 MLQEKAQKKEYEVCYRIIEETGPDHDKRFTAGVYLHGELQGKGIGKTKKEAEQQAAHFAL 243
>gi|307276679|ref|ZP_07557797.1| ribonuclease III [Enterococcus faecalis TX2134]
gi|306506789|gb|EFM75941.1| ribonuclease III [Enterococcus faecalis TX2134]
Length = 243
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 631 LQEIGKRCSS-KVEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
LQE+ +R +E+R + + D F EV GE IG+G GK++K A+Q AAE AL
Sbjct: 179 LQEVLQRKGDVSIEYRLIKEEGPAHDRTFFTEVYMNGELIGLGQGKSKKLAEQDAAERAL 238
>gi|300701489|ref|XP_002994977.1| hypothetical protein NCER_102325 [Nosema ceranae BRL01]
gi|239603396|gb|EEQ81306.1| hypothetical protein NCER_102325 [Nosema ceranae BRL01]
Length = 200
Score = 40.8 bits (94), Expect = 3.2, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 250 DTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLL 309
D S V+ RP +Y++ K++E++V TM + YA ++ +L+DP IG++ L
Sbjct: 90 DISYCVKFRP----YLNYMLECLYKKYEIHVYTMGNKVYANKIVKLIDPTRKYIGNRILT 145
Query: 310 DRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKD 351
+ G +K L +F H + +++DDR +W+ D
Sbjct: 146 RDENGI--GFKKDLNRLFS---IHSNV-VILDDRDDIWDYSD 181
>gi|227517298|ref|ZP_03947347.1| ribonuclease III [Enterococcus faecalis TX0104]
gi|227554519|ref|ZP_03984566.1| ribonuclease III [Enterococcus faecalis HH22]
gi|229547475|ref|ZP_04436200.1| ribonuclease III [Enterococcus faecalis TX1322]
gi|229548050|ref|ZP_04436775.1| ribonuclease III [Enterococcus faecalis ATCC 29200]
gi|256854772|ref|ZP_05560136.1| ribonuclease III [Enterococcus faecalis T8]
gi|293385103|ref|ZP_06630929.1| ribonuclease III [Enterococcus faecalis R712]
gi|293389076|ref|ZP_06633548.1| ribonuclease III [Enterococcus faecalis S613]
gi|307270584|ref|ZP_07551882.1| ribonuclease III [Enterococcus faecalis TX4248]
gi|307273593|ref|ZP_07554821.1| ribonuclease III [Enterococcus faecalis TX0855]
gi|307284870|ref|ZP_07565026.1| ribonuclease III [Enterococcus faecalis TX0860]
gi|307288870|ref|ZP_07568843.1| ribonuclease III [Enterococcus faecalis TX0109]
gi|307292116|ref|ZP_07571982.1| ribonuclease III [Enterococcus faecalis TX0411]
gi|312902145|ref|ZP_07761405.1| ribonuclease III [Enterococcus faecalis TX0470]
gi|312905399|ref|ZP_07764513.1| ribonuclease III [Enterococcus faecalis TX0635]
gi|312906714|ref|ZP_07765714.1| ribonuclease III [Enterococcus faecalis DAPTO 512]
gi|312910825|ref|ZP_07769661.1| ribonuclease III [Enterococcus faecalis DAPTO 516]
gi|312953196|ref|ZP_07772042.1| ribonuclease III [Enterococcus faecalis TX0102]
gi|384514329|ref|YP_005709422.1| ribonuclease III [Enterococcus faecalis OG1RF]
gi|384516896|ref|YP_005704201.1| ribonuclease III [Enterococcus faecalis 62]
gi|397701246|ref|YP_006539034.1| ribonuclease III [Enterococcus faecalis D32]
gi|422687023|ref|ZP_16745213.1| ribonuclease III [Enterococcus faecalis TX4000]
gi|422689979|ref|ZP_16748069.1| ribonuclease III [Enterococcus faecalis TX0630]
gi|422692405|ref|ZP_16750426.1| ribonuclease III [Enterococcus faecalis TX0031]
gi|422696091|ref|ZP_16754068.1| ribonuclease III [Enterococcus faecalis TX4244]
gi|422698495|ref|ZP_16756387.1| ribonuclease III [Enterococcus faecalis TX1346]
gi|422700459|ref|ZP_16758306.1| ribonuclease III [Enterococcus faecalis TX1342]
gi|422704076|ref|ZP_16761891.1| ribonuclease III [Enterococcus faecalis TX1302]
gi|422708000|ref|ZP_16765534.1| ribonuclease III [Enterococcus faecalis TX0043]
gi|422711137|ref|ZP_16768070.1| ribonuclease III [Enterococcus faecalis TX0027]
gi|422713897|ref|ZP_16770645.1| ribonuclease III [Enterococcus faecalis TX0309A]
gi|422718478|ref|ZP_16775131.1| ribonuclease III [Enterococcus faecalis TX0309B]
gi|422720836|ref|ZP_16777443.1| ribonuclease III [Enterococcus faecalis TX0017]
gi|422723566|ref|ZP_16780101.1| ribonuclease III [Enterococcus faecalis TX2137]
gi|422725696|ref|ZP_16782154.1| ribonuclease III [Enterococcus faecalis TX0312]
gi|422728465|ref|ZP_16784882.1| ribonuclease III [Enterococcus faecalis TX0012]
gi|422732835|ref|ZP_16789164.1| ribonuclease III [Enterococcus faecalis TX0645]
gi|422736033|ref|ZP_16792298.1| ribonuclease III [Enterococcus faecalis TX1341]
gi|422738680|ref|ZP_16793871.1| ribonuclease III [Enterococcus faecalis TX2141]
gi|422868345|ref|ZP_16914888.1| ribonuclease III [Enterococcus faecalis TX1467]
gi|424674100|ref|ZP_18111026.1| ribonuclease III [Enterococcus faecalis 599]
gi|424677347|ref|ZP_18114199.1| ribonuclease III [Enterococcus faecalis ERV103]
gi|424681039|ref|ZP_18117835.1| ribonuclease III [Enterococcus faecalis ERV116]
gi|424685288|ref|ZP_18121988.1| ribonuclease III [Enterococcus faecalis ERV129]
gi|424688592|ref|ZP_18125197.1| ribonuclease III [Enterococcus faecalis ERV25]
gi|424690566|ref|ZP_18127098.1| ribonuclease III [Enterococcus faecalis ERV31]
gi|424694302|ref|ZP_18130705.1| ribonuclease III [Enterococcus faecalis ERV37]
gi|424697969|ref|ZP_18134281.1| ribonuclease III [Enterococcus faecalis ERV41]
gi|424701524|ref|ZP_18137696.1| ribonuclease III [Enterococcus faecalis ERV62]
gi|424704525|ref|ZP_18140620.1| ribonuclease III [Enterococcus faecalis ERV63]
gi|424711652|ref|ZP_18143864.1| ribonuclease III [Enterococcus faecalis ERV65]
gi|424716431|ref|ZP_18145742.1| ribonuclease III [Enterococcus faecalis ERV68]
gi|424721947|ref|ZP_18151014.1| ribonuclease III [Enterococcus faecalis ERV72]
gi|424724735|ref|ZP_18153673.1| ribonuclease III [Enterococcus faecalis ERV73]
gi|424727557|ref|ZP_18156186.1| ribonuclease III [Enterococcus faecalis ERV81]
gi|424744501|ref|ZP_18172795.1| ribonuclease III [Enterococcus faecalis ERV85]
gi|424753913|ref|ZP_18181842.1| ribonuclease III [Enterococcus faecalis ERV93]
gi|424759045|ref|ZP_18186718.1| ribonuclease III [Enterococcus faecalis R508]
gi|430360155|ref|ZP_19426132.1| ribonuclease III [Enterococcus faecalis OG1X]
gi|430366186|ref|ZP_19427367.1| ribonuclease III [Enterococcus faecalis M7]
gi|227075305|gb|EEI13268.1| ribonuclease III [Enterococcus faecalis TX0104]
gi|227176317|gb|EEI57289.1| ribonuclease III [Enterococcus faecalis HH22]
gi|229306839|gb|EEN72835.1| ribonuclease III [Enterococcus faecalis ATCC 29200]
gi|229307399|gb|EEN73386.1| ribonuclease III [Enterococcus faecalis TX1322]
gi|256710332|gb|EEU25376.1| ribonuclease III [Enterococcus faecalis T8]
gi|291077580|gb|EFE14944.1| ribonuclease III [Enterococcus faecalis R712]
gi|291081544|gb|EFE18507.1| ribonuclease III [Enterococcus faecalis S613]
gi|306496769|gb|EFM66320.1| ribonuclease III [Enterococcus faecalis TX0411]
gi|306500142|gb|EFM69486.1| ribonuclease III [Enterococcus faecalis TX0109]
gi|306503129|gb|EFM72386.1| ribonuclease III [Enterococcus faecalis TX0860]
gi|306509606|gb|EFM78648.1| ribonuclease III [Enterococcus faecalis TX0855]
gi|306513165|gb|EFM81799.1| ribonuclease III [Enterococcus faecalis TX4248]
gi|310627362|gb|EFQ10645.1| ribonuclease III [Enterococcus faecalis DAPTO 512]
gi|310628813|gb|EFQ12096.1| ribonuclease III [Enterococcus faecalis TX0102]
gi|310631128|gb|EFQ14411.1| ribonuclease III [Enterococcus faecalis TX0635]
gi|311288848|gb|EFQ67404.1| ribonuclease III [Enterococcus faecalis DAPTO 516]
gi|311290809|gb|EFQ69365.1| ribonuclease III [Enterococcus faecalis TX0470]
gi|315026454|gb|EFT38386.1| ribonuclease III [Enterococcus faecalis TX2137]
gi|315028377|gb|EFT40309.1| ribonuclease III [Enterococcus faecalis TX4000]
gi|315031785|gb|EFT43717.1| ribonuclease III [Enterococcus faecalis TX0017]
gi|315034802|gb|EFT46734.1| ribonuclease III [Enterococcus faecalis TX0027]
gi|315145468|gb|EFT89484.1| ribonuclease III [Enterococcus faecalis TX2141]
gi|315146605|gb|EFT90621.1| ribonuclease III [Enterococcus faecalis TX4244]
gi|315151034|gb|EFT95050.1| ribonuclease III [Enterococcus faecalis TX0012]
gi|315152764|gb|EFT96780.1| ribonuclease III [Enterococcus faecalis TX0031]
gi|315154690|gb|EFT98706.1| ribonuclease III [Enterococcus faecalis TX0043]
gi|315159400|gb|EFU03417.1| ribonuclease III [Enterococcus faecalis TX0312]
gi|315161159|gb|EFU05176.1| ribonuclease III [Enterococcus faecalis TX0645]
gi|315164397|gb|EFU08414.1| ribonuclease III [Enterococcus faecalis TX1302]
gi|315167205|gb|EFU11222.1| ribonuclease III [Enterococcus faecalis TX1341]
gi|315171217|gb|EFU15234.1| ribonuclease III [Enterococcus faecalis TX1342]
gi|315172944|gb|EFU16961.1| ribonuclease III [Enterococcus faecalis TX1346]
gi|315573246|gb|EFU85437.1| ribonuclease III [Enterococcus faecalis TX0309B]
gi|315577147|gb|EFU89338.1| ribonuclease III [Enterococcus faecalis TX0630]
gi|315581180|gb|EFU93371.1| ribonuclease III [Enterococcus faecalis TX0309A]
gi|323479029|gb|ADX78468.1| ribonuclease III [Enterococcus faecalis 62]
gi|327536218|gb|AEA95052.1| ribonuclease III [Enterococcus faecalis OG1RF]
gi|329575676|gb|EGG57203.1| ribonuclease III [Enterococcus faecalis TX1467]
gi|397337885|gb|AFO45557.1| ribonuclease III [Enterococcus faecalis D32]
gi|402352044|gb|EJU86909.1| ribonuclease III [Enterococcus faecalis 599]
gi|402352426|gb|EJU87277.1| ribonuclease III [Enterococcus faecalis ERV116]
gi|402354640|gb|EJU89443.1| ribonuclease III [Enterococcus faecalis ERV103]
gi|402359269|gb|EJU93911.1| ribonuclease III [Enterococcus faecalis ERV129]
gi|402360051|gb|EJU94660.1| ribonuclease III [Enterococcus faecalis ERV25]
gi|402363764|gb|EJU98222.1| ribonuclease III [Enterococcus faecalis ERV31]
gi|402370958|gb|EJV05137.1| ribonuclease III [Enterococcus faecalis ERV37]
gi|402371555|gb|EJV05712.1| ribonuclease III [Enterococcus faecalis ERV62]
gi|402374205|gb|EJV08241.1| ribonuclease III [Enterococcus faecalis ERV41]
gi|402381547|gb|EJV15250.1| ribonuclease III [Enterococcus faecalis ERV63]
gi|402383084|gb|EJV16701.1| ribonuclease III [Enterococcus faecalis ERV65]
gi|402387948|gb|EJV21400.1| ribonuclease III [Enterococcus faecalis ERV68]
gi|402389984|gb|EJV23356.1| ribonuclease III [Enterococcus faecalis ERV72]
gi|402393981|gb|EJV27183.1| ribonuclease III [Enterococcus faecalis ERV73]
gi|402396232|gb|EJV29301.1| ribonuclease III [Enterococcus faecalis ERV81]
gi|402398832|gb|EJV31749.1| ribonuclease III [Enterococcus faecalis ERV85]
gi|402403439|gb|EJV36113.1| ribonuclease III [Enterococcus faecalis ERV93]
gi|402405221|gb|EJV37819.1| ribonuclease III [Enterococcus faecalis R508]
gi|429513067|gb|ELA02660.1| ribonuclease III [Enterococcus faecalis OG1X]
gi|429517200|gb|ELA06667.1| ribonuclease III [Enterococcus faecalis M7]
Length = 243
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 631 LQEIGKRCSS-KVEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
LQE+ +R +E+R + + D F EV GE IG+G GK++K A+Q AAE AL
Sbjct: 179 LQEVLQRKGDVSIEYRLIKEEGPAHDRTFFTEVYMNGELIGLGQGKSKKLAEQDAAERAL 238
>gi|167555192|ref|NP_001107942.1| interferon-induced, double-stranded RNA-activated protein kinase
[Danio rerio]
gi|163879058|gb|ABY47905.1| IFN-stimulated dsRNA-activated eIF2-alpha kinase 2 [Danio rerio]
gi|164508750|emb|CAM07150.1| double-stranded RNA activated protein kinase [Danio rerio]
Length = 682
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 630 VLQEIGKRCSSKVEFRS--VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
+L E ++ VEF S + +F++ + G+K G GKT+K+A+Q AA+NAL
Sbjct: 11 LLNEYQQKTQCTVEFEEGPTDGPSHNKRFTMRAIVNGQKFPDGTGKTKKEAKQNAAKNAL 70
Query: 688 HYLAEKYVAYITP 700
L + TP
Sbjct: 71 EGLKSTHSDEPTP 83
>gi|307703518|ref|ZP_07640460.1| ribonuclease III [Streptococcus oralis ATCC 35037]
gi|307622925|gb|EFO01920.1| ribonuclease III [Streptococcus oralis ATCC 35037]
Length = 190
Score = 40.4 bits (93), Expect = 3.4, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 615 EGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVST----SKDLQFSVEVLFTGEKIGVG 670
E G ++ Y + LQE+ + + V+ R V++ + D F VEVL G+ IG G
Sbjct: 109 EAGDFEMIKDYKT--HLQEL-LQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKG 165
Query: 671 MGKTRKDAQQQAAENAL 687
G+++K A+Q+AA+NA+
Sbjct: 166 QGRSKKLAEQEAAKNAV 182
>gi|268572137|ref|XP_002641244.1| Hypothetical protein CBG09112 [Caenorhabditis briggsae]
Length = 1717
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 335 KMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFK 394
K + + +C+VW+ DQ + +V A + +AN+V L + + C V+ K
Sbjct: 467 KFQVGTETKCRVWQICDQRKNLIVTCREQIIALKGPSANSVEELEIGNTLPCIVK----K 522
Query: 395 EFDENLL-----RSISEVFYEDEAVNLPAAPDVSNYLMS 428
FD ++ +I V ++ A++LPA P V++++++
Sbjct: 523 VFDSGVVLLATFNNICGVLRKEAAIHLPATPKVNDFVVA 561
>gi|401683573|ref|ZP_10815459.1| ribonuclease III [Streptococcus sp. BS35b]
gi|400187651|gb|EJO21845.1| ribonuclease III [Streptococcus sp. BS35b]
Length = 232
Score = 40.4 bits (93), Expect = 3.6, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKVFDVEVLVKGKSIGKGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|419766139|ref|ZP_14292354.1| ribonuclease III [Streptococcus mitis SK579]
gi|383354415|gb|EID31980.1| ribonuclease III [Streptococcus mitis SK579]
Length = 232
Score = 40.4 bits (93), Expect = 3.7, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGKGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|418975712|ref|ZP_13523610.1| ribonuclease III [Streptococcus oralis SK1074]
gi|383347158|gb|EID25159.1| ribonuclease III [Streptococcus oralis SK1074]
Length = 232
Score = 40.4 bits (93), Expect = 3.7, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 615 EGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVST----SKDLQFSVEVLFTGEKIGVG 670
E G ++ Y + LQE+ + + V+ R V++ + D F VEVL G+ IG G
Sbjct: 151 EAGDFEMIKDYKT--HLQEL-LQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKG 207
Query: 671 MGKTRKDAQQQAAENAL 687
G+++K A+Q+AA+NA+
Sbjct: 208 QGRSKKLAEQEAAKNAV 224
>gi|417941213|ref|ZP_12584500.1| ribonuclease III [Streptococcus oralis SK313]
gi|343388506|gb|EGV01092.1| ribonuclease III [Streptococcus oralis SK313]
Length = 232
Score = 40.4 bits (93), Expect = 3.7, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 615 EGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVST----SKDLQFSVEVLFTGEKIGVG 670
E G ++ Y + LQE+ + + V+ R V++ + D F VEVL G+ IG G
Sbjct: 151 EAGDFEMIKDYKT--HLQEL-LQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKG 207
Query: 671 MGKTRKDAQQQAAENAL 687
G+++K A+Q+AA+NA+
Sbjct: 208 QGRSKKLAEQEAAKNAV 224
>gi|293334879|ref|NP_001167729.1| uncharacterized protein LOC100381417 [Zea mays]
gi|223943645|gb|ACN25906.1| unknown [Zea mays]
Length = 178
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 621 LLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQ 680
+ P L + ++E+ +RC + E ++ +VEVL G +IGV +K AQ+
Sbjct: 2 VTPDTLPMHPVRELQERCQQQAEGLEYKASRTGNVATVEVLVDGIQIGVAQNPQKKMAQK 61
Query: 681 QAAENALHYLAEKYVA 696
AA NAL L EK A
Sbjct: 62 LAARNALVVLKEKETA 77
>gi|164508752|emb|CAM07151.1| double-stranded RNA activated protein kinase [Danio rerio]
Length = 682
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 630 VLQEIGKRCSSKVEFRS--VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
+L E ++ VEF S + +F++ + G+K G GKT+K+A+Q AA+NAL
Sbjct: 11 LLNEYQQKTQCTVEFEEGPTDGPSHNKRFTMRAIVNGQKFPDGTGKTKKEAKQNAAKNAL 70
Query: 688 HYLAEKYVAYITP 700
L + TP
Sbjct: 71 EGLKSTHSDEPTP 83
>gi|306825115|ref|ZP_07458457.1| ribonuclease III [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|417794226|ref|ZP_12441485.1| ribonuclease III [Streptococcus oralis SK255]
gi|421489105|ref|ZP_15936493.1| ribonuclease III [Streptococcus oralis SK304]
gi|304432551|gb|EFM35525.1| ribonuclease III [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|334270464|gb|EGL88868.1| ribonuclease III [Streptococcus oralis SK255]
gi|400368322|gb|EJP21337.1| ribonuclease III [Streptococcus oralis SK304]
Length = 232
Score = 40.4 bits (93), Expect = 3.8, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 615 EGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVST----SKDLQFSVEVLFTGEKIGVG 670
E G ++ Y + LQE+ + + V+ R V++ + D F VEVL G+ IG G
Sbjct: 151 EAGDFEMIKDYKT--HLQEL-LQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKG 207
Query: 671 MGKTRKDAQQQAAENAL 687
G+++K A+Q+AA+NA+
Sbjct: 208 QGRSKKLAEQEAAKNAV 224
>gi|270292630|ref|ZP_06198841.1| ribonuclease III [Streptococcus sp. M143]
gi|270278609|gb|EFA24455.1| ribonuclease III [Streptococcus sp. M143]
Length = 232
Score = 40.4 bits (93), Expect = 3.8, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 641 KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
+ + S + + D F VEVL G+ IG G G+++K A+Q+AA+NA+
Sbjct: 178 RYQVTSEMGPAHDKVFDVEVLVEGKSIGKGQGRSKKLAEQEAAKNAV 224
>gi|385262508|ref|ZP_10040612.1| ribonuclease III [Streptococcus sp. SK643]
gi|385190409|gb|EIF37856.1| ribonuclease III [Streptococcus sp. SK643]
Length = 232
Score = 40.4 bits (93), Expect = 3.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGHGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|419782205|ref|ZP_14308014.1| ribonuclease III [Streptococcus oralis SK610]
gi|383183309|gb|EIC75846.1| ribonuclease III [Streptococcus oralis SK610]
Length = 232
Score = 40.4 bits (93), Expect = 4.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|322375351|ref|ZP_08049864.1| ribonuclease III [Streptococcus sp. C300]
gi|321279614|gb|EFX56654.1| ribonuclease III [Streptococcus sp. C300]
Length = 232
Score = 40.4 bits (93), Expect = 4.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|293365563|ref|ZP_06612272.1| ribonuclease III [Streptococcus oralis ATCC 35037]
gi|315613276|ref|ZP_07888185.1| ribonuclease III [Streptococcus sanguinis ATCC 49296]
gi|406576568|ref|ZP_11052196.1| ribonuclease III [Streptococcus sp. GMD6S]
gi|291315931|gb|EFE56375.1| ribonuclease III [Streptococcus oralis ATCC 35037]
gi|315314511|gb|EFU62554.1| ribonuclease III [Streptococcus sanguinis ATCC 49296]
gi|404461316|gb|EKA07289.1| ribonuclease III [Streptococcus sp. GMD6S]
Length = 232
Score = 40.4 bits (93), Expect = 4.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|419779382|ref|ZP_14305258.1| ribonuclease III [Streptococcus oralis SK10]
gi|383186410|gb|EIC78880.1| ribonuclease III [Streptococcus oralis SK10]
Length = 232
Score = 40.4 bits (93), Expect = 4.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|404493023|ref|YP_006717129.1| ribonuclease III [Pelobacter carbinolicus DSM 2380]
gi|90101632|sp|Q3A4Q8.1|RNC_PELCD RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|77545087|gb|ABA88649.1| ribonuclease III [Pelobacter carbinolicus DSM 2380]
Length = 232
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 656 FSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692
+SVE F G IG G G+++K A+Q AA+ AL YL E
Sbjct: 196 YSVEAHFRGSCIGQGQGRSKKSAEQAAAKQALEYLEE 232
>gi|414158590|ref|ZP_11414884.1| ribonuclease 3 [Streptococcus sp. F0441]
gi|410871135|gb|EKS19092.1| ribonuclease 3 [Streptococcus sp. F0441]
Length = 232
Score = 40.4 bits (93), Expect = 4.3, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|353236741|emb|CCA68729.1| related to FCP1-TFIIF interacting component of CTD phosphatase
[Piriformospora indica DSM 11827]
Length = 782
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 14/109 (12%)
Query: 276 FEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335
+E++V TM R YA + LDP G GS RV+ + N+ +
Sbjct: 249 YEMHVYTMGVRSYANAICAALDPSGAWFGS-----RVLSRNESGSDRVKNLKRLFPSDQS 303
Query: 336 MAMVIDDRCKVWEDKDQPRVHVVP--------AFTPYYAPQAETANAVP 376
M +VIDDR VW + V V+P + P+ +A+AVP
Sbjct: 304 MVVVIDDRADVW-NWSPNLVRVIPFEFFVGTGDINASFLPKQASADAVP 351
>gi|226185035|dbj|BAH33139.1| probable ribonuclease III [Rhodococcus erythropolis PR4]
Length = 257
Score = 40.0 bits (92), Expect = 4.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 631 LQEIGKRCSSKVEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALH 688
LQE+ + V + +T D +F+ VL + + +GVG+G+++K+A+Q+AA +A
Sbjct: 177 LQELTAEHGAGVPVYEITATGPDHDKEFTATVLISDKPLGVGVGRSKKEAEQKAASSAWK 236
Query: 689 YLAE 692
++E
Sbjct: 237 TMSE 240
>gi|306829619|ref|ZP_07462809.1| ribonuclease III [Streptococcus mitis ATCC 6249]
gi|304428705|gb|EFM31795.1| ribonuclease III [Streptococcus mitis ATCC 6249]
Length = 232
Score = 40.0 bits (92), Expect = 4.5, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G+ IG G G+
Sbjct: 151 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKIFDVEVLVEGKSIGKGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|418976305|ref|ZP_13524186.1| ribonuclease III [Streptococcus mitis SK575]
gi|383351694|gb|EID29470.1| ribonuclease III [Streptococcus mitis SK575]
Length = 232
Score = 40.0 bits (92), Expect = 4.6, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G+ ++ Y + + L ++ + + + S + D F VEVL G+ IG G G+
Sbjct: 151 ETGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|419780331|ref|ZP_14306181.1| ribonuclease III [Streptococcus oralis SK100]
gi|383185490|gb|EIC77986.1| ribonuclease III [Streptococcus oralis SK100]
Length = 232
Score = 40.0 bits (92), Expect = 4.7, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + D F+VEVL G+ IG G G+++K A+Q+AA+NA+
Sbjct: 183 SETGPAHDKVFNVEVLVEGKSIGKGQGRSKKLAEQEAAKNAV 224
>gi|23098981|ref|NP_692447.1| ribonuclease III [Oceanobacillus iheyensis HTE831]
gi|38372423|sp|Q8ER05.1|RNC_OCEIH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|22777209|dbj|BAC13482.1| ribonuclease III [Oceanobacillus iheyensis HTE831]
Length = 228
Score = 40.0 bits (92), Expect = 4.9, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 631 LQE-IGKRCSSKVEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
LQE + + K+E+R + S + +F EV+ + G+G G+T+K+A+Q+AA+NAL
Sbjct: 163 LQEFVQQHKDQKIEYRIIEEKGPSHNKEFVAEVVIQEKAAGIGTGRTKKEAEQRAAKNAL 222
>gi|409349323|ref|ZP_11232815.1| Ribonuclease III [Lactobacillus equicursoris CIP 110162]
gi|407878260|emb|CCK84873.1| Ribonuclease III [Lactobacillus equicursoris CIP 110162]
Length = 232
Score = 40.0 bits (92), Expect = 4.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 631 LQE-IGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689
LQE + + + K+E+R + + + F VEV G+ + G G+ +K A+Q AA++AL
Sbjct: 167 LQEFLQQNGTVKIEYRVLKESQQPPHFEVEVSVDGQVLAQGEGRNKKKAEQDAAKHALSR 226
Query: 690 LAEK 693
L E+
Sbjct: 227 LNER 230
>gi|408410988|ref|ZP_11182176.1| Ribonuclease III [Lactobacillus sp. 66c]
gi|407874846|emb|CCK83982.1| Ribonuclease III [Lactobacillus sp. 66c]
Length = 232
Score = 40.0 bits (92), Expect = 5.1, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 631 LQE-IGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHY 689
LQE + + + K+E+R + + + F VEV G+ + G G+ +K A+Q AA++AL
Sbjct: 167 LQEFLQQNGTVKIEYRVLKESQQPPHFEVEVSVDGQVLAQGEGRNKKKAEQDAAKHALSR 226
Query: 690 LAEK 693
L E+
Sbjct: 227 LNER 230
>gi|444432141|ref|ZP_21227300.1| ribonuclease III [Gordonia soli NBRC 108243]
gi|443886970|dbj|GAC69021.1| ribonuclease III [Gordonia soli NBRC 108243]
Length = 243
Score = 40.0 bits (92), Expect = 5.2, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 30/41 (73%)
Query: 653 DLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693
D +F+ + GE++G G+G+T+K+A+Q+AA +A L+++
Sbjct: 199 DKEFTATAVIAGEELGTGVGRTKKEAEQKAAAHAWKALSDR 239
>gi|331266250|ref|YP_004325880.1| ribonuclease III [Streptococcus oralis Uo5]
gi|326682922|emb|CBZ00539.1| ribonuclease III [Streptococcus oralis Uo5]
Length = 232
Score = 40.0 bits (92), Expect = 5.2, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G IG G G+
Sbjct: 151 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGRSIGKGQGR 210
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 211 SKKLAEQEAAKNAV 224
>gi|302389624|ref|YP_003825445.1| RNAse III [Thermosediminibacter oceani DSM 16646]
gi|302200252|gb|ADL07822.1| RNAse III [Thermosediminibacter oceani DSM 16646]
Length = 241
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 618 KTNLLPSYLSIGVLQEIGKRCS-SKVEFRSVVSTSKDLQ--FSVEVLFTGEKIGVGMGKT 674
K L P Y + LQE+ +R S ++ + + D F VEV++ + +G G GK+
Sbjct: 161 KGKLFPDYKT--ALQEMLQRISPDRITYNVIKEEGPDHNKTFFVEVVWKNKILGSGCGKS 218
Query: 675 RKDAQQQAAENALHYLAEKYVA 696
+K+A+Q AA+ A+ +L ++ +A
Sbjct: 219 KKEAEQNAAKAAIRFLKDRNMA 240
>gi|205373341|ref|ZP_03226145.1| ribonuclease III [Bacillus coahuilensis m4-4]
Length = 249
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 631 LQEIGKR-CSSKVEFRSVVST--SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
LQE+ +R S ++E+R ++ + +F +VL +IGVG G+++K+A+Q AA+ AL
Sbjct: 179 LQELIQREGSGQLEYRILLEKGPAHSKEFVSQVLLNSMEIGVGNGRSKKEAEQHAAQKAL 238
Query: 688 HYL 690
+L
Sbjct: 239 EHL 241
>gi|417686722|ref|ZP_12335998.1| ribonuclease III [Streptococcus pneumoniae GA41301]
gi|418159970|ref|ZP_12796669.1| ribonuclease III [Streptococcus pneumoniae GA17227]
gi|419521208|ref|ZP_14060803.1| ribonuclease III [Streptococcus pneumoniae GA05245]
gi|332074858|gb|EGI85330.1| ribonuclease III [Streptococcus pneumoniae GA41301]
gi|353821703|gb|EHE01879.1| ribonuclease III [Streptococcus pneumoniae GA17227]
gi|379538508|gb|EHZ03688.1| ribonuclease III [Streptococcus pneumoniae GA05245]
Length = 232
Score = 40.0 bits (92), Expect = 5.6, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + D F VEVL G+ IG G G+++K A+Q+AA+NA+
Sbjct: 183 SETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAV 224
>gi|417935021|ref|ZP_12578341.1| ribonuclease III [Streptococcus mitis bv. 2 str. F0392]
gi|340771591|gb|EGR94106.1| ribonuclease III [Streptococcus mitis bv. 2 str. F0392]
Length = 232
Score = 39.7 bits (91), Expect = 5.7, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + D F VEVL G+ IG G G+++K A+Q+AA+NA+
Sbjct: 183 SETGPAHDKVFDVEVLVEGKSIGKGQGRSKKLAEQEAAKNAV 224
>gi|419815116|ref|ZP_14339797.1| ribonuclease III [Streptococcus sp. GMD2S]
gi|404469693|gb|EKA14434.1| ribonuclease III [Streptococcus sp. GMD2S]
Length = 87
Score = 39.7 bits (91), Expect = 5.8, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 615 EGGKTNLLPSYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGK 673
E G ++ Y + + L ++ + + S + D F VEVL G+ IG G G+
Sbjct: 6 EAGDFEMIKDYKTHLQELLQVNGDVDIRYQVTSETGPAHDKVFDVEVLVEGKSIGKGQGR 65
Query: 674 TRKDAQQQAAENAL 687
++K A+Q+AA+NA+
Sbjct: 66 SKKLAEQEAAKNAV 79
>gi|406586296|ref|ZP_11061229.1| ribonuclease III [Streptococcus sp. GMD1S]
gi|419816814|ref|ZP_14340987.1| ribonuclease III [Streptococcus sp. GMD4S]
gi|404466848|gb|EKA12142.1| ribonuclease III [Streptococcus sp. GMD4S]
gi|404474245|gb|EKA18563.1| ribonuclease III [Streptococcus sp. GMD1S]
Length = 232
Score = 39.7 bits (91), Expect = 5.8, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 651 SKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
+ D F VEVL G+ IG G G+++K A+Q+AA+NA+
Sbjct: 188 AHDKVFDVEVLVEGKSIGKGQGRSKKLAEQEAAKNAV 224
>gi|297792855|ref|XP_002864312.1| NLI interacting factor family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310147|gb|EFH40571.1| NLI interacting factor family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 251 TSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLD 310
+ L++LRP + + + + F +YV TM +RDYA + +L+DPE G
Sbjct: 136 SEFLIKLRPYVHEF----LKEANEMFSMYVYTMGDRDYANNVLKLIDPEKIYFGH----- 186
Query: 311 RVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWED 349
RV+ L++ C +++DD +VW D
Sbjct: 187 RVITRNESPYIKTLDLVLADECG---VVIVDDTPQVWPD 222
>gi|358465043|ref|ZP_09175000.1| ribonuclease III [Streptococcus sp. oral taxon 058 str. F0407]
gi|357066117|gb|EHI76275.1| ribonuclease III [Streptococcus sp. oral taxon 058 str. F0407]
Length = 232
Score = 39.7 bits (91), Expect = 6.1, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
S + D F VEVL G+ IG G G+++K A+Q+AA+NA+
Sbjct: 183 SETGPAHDKVFDVEVLVEGKSIGKGQGRSKKLAEQEAAKNAV 224
>gi|449662730|ref|XP_004205600.1| PREDICTED: uncharacterized protein LOC101234889 [Hydra
magnipapillata]
Length = 1195
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 645 RSVVSTSKDLQ-FSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
R +ST +Q F V V F G+++G G G++RK+A+++AA++AL
Sbjct: 1094 RIKLSTINGVQNFKVGVYFNGKRLGTGQGRSRKEAEKEAAKSAL 1137
>gi|428306957|ref|YP_007143782.1| RNAse III [Crinalium epipsammum PCC 9333]
gi|428248492|gb|AFZ14272.1| RNAse III [Crinalium epipsammum PCC 9333]
Length = 227
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 646 SVVSTSKDLQFSVEVLFTGEKI-GVGMGKTRKDAQQQAAENAL 687
S T+ D QF +V + GEK+ G G G+++KDA++QAAENAL
Sbjct: 177 SAGGTAHDPQFISQV-YVGEKVYGEGRGRSKKDAEKQAAENAL 218
>gi|383753564|ref|YP_005432467.1| putative ribonuclease 3 [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|381365616|dbj|BAL82444.1| putative ribonuclease 3 [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 240
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 600 VSQNHVSSNSREFLTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTS---KDLQF 656
+Q++V + + +L Y +I LQE+ + + + +VSTS D F
Sbjct: 145 TAQDYVVRQLMPLFRQAEQGAILKDYKTI--LQEVVYQEAQQTVSYELVSTSGPDHDKTF 202
Query: 657 SVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
+ V TG+ +G G G+++K+A+Q+AA+ AL
Sbjct: 203 TFNVCITGKVMGTGTGRSKKEAEQRAAKEAL 233
>gi|15217916|ref|NP_173457.1| haloacid dehalogenase-like hydrolase [Arabidopsis thaliana]
gi|9558594|gb|AAF88157.1|AC026234_8 Contains similarity to a FCP1 serine phosphatase from Xenopus
laevis gi|6689545 [Arabidopsis thaliana]
gi|332191840|gb|AEE29961.1| haloacid dehalogenase-like hydrolase [Arabidopsis thaliana]
Length = 342
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 250 DTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLL 309
D +L++LRP + + + + F +YV TM RDYA + + +DP+ G
Sbjct: 117 DREMLIKLRPFVHEF----LKEANEIFSMYVYTMGNRDYAQAVLKWIDPKKVYFG----- 167
Query: 310 DRVVCV-KSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVP 359
DRV+ +SG K+L V L +++DD VW D ++ + +
Sbjct: 168 DRVITRDESGFSKTLDLV----LADECGVVIVDDTRHVWPDHERNLLQITK 214
>gi|224068194|ref|XP_002302679.1| dicer-like protein [Populus trichocarpa]
gi|222844405|gb|EEE81952.1| dicer-like protein [Populus trichocarpa]
Length = 1817
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQA 682
P L + ++E+ +RC + E +T +VEV G ++GV +K AQ+ A
Sbjct: 1691 PETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQVGVAQNPQKKMAQKLA 1750
Query: 683 AENALHYLAEKYVAYITPRS 702
A NAL L EK A +S
Sbjct: 1751 ARNALVVLKEKETAEAKEKS 1770
>gi|296089026|emb|CBI38729.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 621 LLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQ 680
+ P L + ++E+ +RC + E +T +VEV G +IG+ +K AQ+
Sbjct: 54 VTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQIGIAQNPQKKMAQK 113
Query: 681 QAAENALHYLAEKYVA 696
AA NAL L E+ A
Sbjct: 114 LAARNALVVLKERETA 129
>gi|414864448|tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
Length = 1307
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQA 682
P L + ++E+ +RC + E ++ +VEVL G +IGV +K AQ+ A
Sbjct: 1133 PDTLPMHPVRELQERCQQQAEGLEYKASRTGNVATVEVLVDGIQIGVAQNPQKKMAQKLA 1192
Query: 683 AENALHYLAEKYVA 696
A NAL L EK A
Sbjct: 1193 ARNALVVLKEKETA 1206
>gi|242037143|ref|XP_002465966.1| hypothetical protein SORBIDRAFT_01g049110 [Sorghum bicolor]
gi|241919820|gb|EER92964.1| hypothetical protein SORBIDRAFT_01g049110 [Sorghum bicolor]
Length = 178
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 621 LLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQ 680
+ P L + ++E+ +RC + E ++ +VEV G +IGV +K AQ+
Sbjct: 2 VTPDTLPMHPVRELQERCQQQAEGLEYKASRTGNVATVEVFVDGIQIGVAQNPQKKMAQK 61
Query: 681 QAAENALHYLAEKYVA 696
AA NAL L EK A
Sbjct: 62 LAARNALVVLKEKETA 77
>gi|374997118|ref|YP_004972617.1| ribonuclease III [Desulfosporosinus orientis DSM 765]
gi|357215484|gb|AET70102.1| ribonuclease III [Desulfosporosinus orientis DSM 765]
Length = 261
Score = 39.3 bits (90), Expect = 8.7, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 630 VLQEIGKRCSSKVEFRSVVSTSKD--LQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
VLQE +R +V ++ ++ D F+ V GE +G G+G+T+K+A+Q AA+ L
Sbjct: 191 VLQEKAQREEKEVSYQILLEEGPDHNKSFTAGVFIEGELMGKGIGRTKKEAEQHAAKEVL 250
>gi|344226974|gb|AEN03185.1| dsRNA-dependent protein kinase [Carassius auratus]
Length = 677
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 628 IGVLQEIGKRCSSKVEFR--SVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAEN 685
+ +L E +R VE+ S S + F++ + G++ G GK++K+A+Q AA N
Sbjct: 9 VSLLNEYQQRTQCTVEYEEGSTEGPSHNKTFTMRAIINGQRYPDGTGKSKKEAKQSAARN 68
Query: 686 ALHYLAEKY 694
AL + Y
Sbjct: 69 ALDGIKSTY 77
>gi|397904679|ref|ZP_10505580.1| Ribonuclease III [Caloramator australicus RC3]
gi|397162275|emb|CCJ32914.1| Ribonuclease III [Caloramator australicus RC3]
Length = 238
Score = 39.3 bits (90), Expect = 9.6, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 631 LQEIGKR---CSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENAL 687
LQE +R + K E + D F +EV K G+G+GK++K+A+Q AA+NAL
Sbjct: 170 LQEYVQRNLLSTIKYEVANQWGPDHDKTFEIEVYLDNIKYGLGVGKSKKEAEQMAAKNAL 229
>gi|326935945|ref|XP_003214024.1| PREDICTED: double-stranded RNA-specific adenosine deaminase-like
[Meleagris gallopavo]
Length = 852
Score = 38.9 bits (89), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 620 NLLPSYLSIGVLQEIGKRCSSKVEF--RSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKD 677
NLLP I VL E G++ + +EF S S D +FS V + +G ++K
Sbjct: 250 NLLPGKHPISVLMEYGQKSGNTIEFLLLSQDGPSHDPRFSYCVKMGDQIFPAVVGNSKKG 309
Query: 678 AQQQAAENALHYLAEKYVAYITP 700
A+Q AAE A+ L+ + V + P
Sbjct: 310 AKQMAAEVAVKILSGESVPRVPP 332
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,600,874,156
Number of Sequences: 23463169
Number of extensions: 542708798
Number of successful extensions: 1299503
Number of sequences better than 100.0: 588
Number of HSP's better than 100.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 376
Number of HSP's that attempted gapping in prelim test: 1298568
Number of HSP's gapped (non-prelim): 902
length of query: 788
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 637
effective length of database: 8,816,256,848
effective search space: 5615955612176
effective search space used: 5615955612176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)