Query 003896
Match_columns 788
No_of_seqs 336 out of 1310
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 07:36:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003896.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003896hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef1_A RNA polymerase II subun 100.0 1.8E-31 6.2E-36 292.3 15.8 162 128-365 17-181 (442)
2 3ef0_A RNA polymerase II subun 100.0 3.5E-31 1.2E-35 284.6 16.6 214 127-427 8-276 (372)
3 3qle_A TIM50P; chaperone, mito 99.9 4.5E-24 1.5E-28 213.1 10.5 130 252-392 55-185 (204)
4 2ght_A Carboxy-terminal domain 99.8 1E-21 3.5E-26 190.1 8.6 102 251-361 50-151 (181)
5 2hhl_A CTD small phosphatase-l 99.8 1.2E-20 4.2E-25 185.5 8.8 121 251-382 63-183 (195)
6 3shq_A UBLCP1; phosphatase, hy 99.8 2.6E-20 9E-25 196.8 5.6 135 254-394 162-309 (320)
7 3adj_A F21M12.9 protein; HYL1, 99.7 1E-17 3.6E-22 143.0 9.1 67 625-691 4-73 (76)
8 2dix_A Interferon-inducible do 99.7 2.5E-17 8.4E-22 143.6 11.1 69 623-692 6-76 (84)
9 3llh_A RISC-loading complex su 99.7 2.1E-17 7.1E-22 145.7 10.4 73 619-692 8-82 (90)
10 3adg_A F21M12.9 protein; HYL1, 99.7 2.7E-17 9.2E-22 139.1 9.7 67 624-691 2-72 (73)
11 1x49_A Interferon-induced, dou 99.7 2.8E-17 9.7E-22 147.2 9.6 76 617-693 7-84 (97)
12 3adl_A RISC-loading complex su 99.7 6.3E-17 2.2E-21 142.7 11.5 67 625-692 15-84 (88)
13 1di2_A XLRBPA, double stranded 99.7 3.9E-17 1.3E-21 136.6 9.5 65 626-691 1-68 (69)
14 1uhz_A Staufen (RNA binding pr 99.7 7E-17 2.4E-21 142.5 11.4 69 623-692 4-75 (89)
15 2cpn_A TAR RNA-binding protein 99.7 1E-16 3.5E-21 141.5 11.7 67 624-691 15-84 (89)
16 2khx_A Ribonuclease 3; drosha, 99.7 1.6E-17 5.4E-22 145.5 6.0 68 625-692 1-76 (85)
17 1t4n_A Ribonuclease III; DSRBD 99.7 3E-17 1E-21 147.2 6.4 66 625-691 6-74 (94)
18 1ekz_A DSRBDIII, maternal effe 99.7 2.5E-17 8.4E-22 140.4 5.0 68 623-691 5-74 (76)
19 1x48_A Interferon-induced, dou 99.7 2.9E-16 9.8E-21 138.2 11.4 67 625-693 6-75 (88)
20 2b7t_A Double-stranded RNA-spe 99.7 1.6E-16 5.3E-21 134.6 9.4 66 625-692 4-71 (73)
21 1whq_A RNA helicase A; double- 99.7 3.3E-16 1.1E-20 140.9 11.9 70 624-694 5-77 (99)
22 1x47_A DGCR8 protein; structur 99.7 4.1E-16 1.4E-20 139.8 11.5 79 613-692 5-84 (98)
23 1t4o_A Ribonuclease III; RNT1P 99.7 1.5E-16 5.2E-21 147.6 8.8 72 623-695 6-82 (117)
24 2dmy_A Spermatid perinuclear R 99.6 6.5E-16 2.2E-20 138.2 10.2 68 622-691 13-82 (97)
25 2l2n_A Hyponastic leave 1; DSR 99.6 4.1E-16 1.4E-20 140.9 8.7 69 623-692 15-87 (103)
26 1uil_A Double-stranded RNA-bin 99.6 7.2E-16 2.5E-20 141.6 8.9 69 624-693 25-100 (113)
27 2l33_A Interleukin enhancer-bi 99.6 1.1E-15 3.7E-20 136.0 9.7 65 625-691 14-80 (91)
28 1whn_A Hypothetical protein ri 99.6 2.4E-15 8.1E-20 141.3 8.7 67 624-691 25-93 (128)
29 2ljh_A Double-stranded RNA-spe 99.6 3.6E-15 1.2E-19 137.7 9.6 65 623-692 35-101 (114)
30 1qu6_A Protein kinase PKR; dsR 99.5 6.9E-15 2.4E-19 143.1 8.0 71 623-693 11-83 (179)
31 2b7v_A Double-stranded RNA-spe 99.5 2.2E-14 7.4E-19 120.8 9.7 65 623-692 2-68 (71)
32 3p1x_A Interleukin enhancer-bi 99.5 7.6E-14 2.6E-18 119.3 8.2 65 628-694 7-73 (75)
33 2nug_A Ribonuclease III, RNAse 99.4 2.1E-13 7.1E-18 136.0 9.9 66 625-691 150-218 (221)
34 1o0w_A Ribonuclease III, RNAse 99.4 2.6E-13 8.9E-18 138.2 10.6 68 625-692 179-249 (252)
35 2yt4_A Protein DGCR8; DSRBD, R 99.4 3.9E-13 1.3E-17 136.4 10.8 71 623-693 20-91 (232)
36 3n3w_A Ribonuclease III; nucle 99.3 1.3E-13 4.5E-18 140.7 0.0 68 625-692 177-247 (248)
37 1qu6_A Protein kinase PKR; dsR 99.3 8.4E-12 2.9E-16 121.4 9.2 71 623-694 102-174 (179)
38 2a11_A Ribonuclease III, RNAse 99.3 4.4E-13 1.5E-17 135.3 0.0 68 625-693 162-232 (242)
39 2l3j_A Double-stranded RNA-spe 99.2 1.1E-11 3.6E-16 126.0 9.1 64 624-692 160-225 (236)
40 2l3j_A Double-stranded RNA-spe 99.2 6.4E-11 2.2E-15 120.2 10.3 66 625-692 4-71 (236)
41 2yt4_A Protein DGCR8; DSRBD, R 99.0 2E-10 7E-15 116.5 6.9 65 624-692 129-198 (232)
42 3rv0_A K. polysporus DCR1; RNA 99.0 3.5E-11 1.2E-15 128.6 0.0 65 625-692 254-320 (341)
43 3c4b_A Endoribonuclease dicer; 98.9 2.4E-09 8E-14 109.2 7.2 65 627-692 199-263 (265)
44 3m9l_A Hydrolase, haloacid deh 97.6 0.00037 1.3E-08 65.0 10.6 84 254-345 68-155 (205)
45 3kbb_A Phosphorylated carbohyd 97.5 0.00062 2.1E-08 63.8 11.2 80 255-344 83-167 (216)
46 1nnl_A L-3-phosphoserine phosp 97.4 0.00026 8.9E-09 67.0 6.7 47 255-304 85-132 (225)
47 1rku_A Homoserine kinase; phos 97.2 0.0019 6.3E-08 60.3 10.4 75 256-344 69-155 (206)
48 3e58_A Putative beta-phosphogl 97.2 0.0007 2.4E-08 61.7 7.1 80 256-345 89-173 (214)
49 3m1y_A Phosphoserine phosphata 97.2 0.0012 4.1E-08 61.4 8.6 81 255-345 74-169 (217)
50 2pib_A Phosphorylated carbohyd 97.1 0.0019 6.6E-08 58.8 9.4 81 255-345 83-168 (216)
51 3kzx_A HAD-superfamily hydrola 97.0 0.0043 1.5E-07 58.4 11.2 81 255-345 102-188 (231)
52 3ddh_A Putative haloacid dehal 97.0 0.0037 1.3E-07 57.7 10.4 86 255-350 104-192 (234)
53 1yns_A E-1 enzyme; hydrolase f 96.9 0.0018 6.2E-08 64.7 8.4 82 255-344 129-214 (261)
54 3kd3_A Phosphoserine phosphohy 96.9 0.0022 7.7E-08 58.7 8.3 83 257-345 83-175 (219)
55 4dcc_A Putative haloacid dehal 96.9 0.0013 4.6E-08 62.4 6.7 81 257-345 113-201 (229)
56 3fvv_A Uncharacterized protein 96.8 0.0014 4.6E-08 62.2 6.1 44 257-304 93-136 (232)
57 3ed5_A YFNB; APC60080, bacillu 96.8 0.014 4.7E-07 54.5 12.6 87 255-352 102-196 (238)
58 3s6j_A Hydrolase, haloacid deh 96.8 0.0043 1.5E-07 57.7 8.9 81 255-345 90-175 (233)
59 2fea_A 2-hydroxy-3-keto-5-meth 96.8 0.0031 1.1E-07 61.0 8.2 37 255-294 76-112 (236)
60 3sd7_A Putative phosphatase; s 96.7 0.0041 1.4E-07 59.0 8.5 81 255-345 109-195 (240)
61 4eek_A Beta-phosphoglucomutase 96.7 0.0049 1.7E-07 59.3 9.1 82 255-345 109-196 (259)
62 3dv9_A Beta-phosphoglucomutase 96.7 0.0056 1.9E-07 57.7 8.9 81 256-345 108-193 (247)
63 3u26_A PF00702 domain protein; 96.6 0.0016 5.4E-08 60.9 4.9 86 256-352 100-192 (234)
64 1zrn_A L-2-haloacid dehalogena 96.6 0.0071 2.4E-07 56.9 9.4 80 255-344 94-178 (232)
65 2b0c_A Putative phosphatase; a 96.6 0.0012 4E-08 60.9 3.9 83 254-345 89-176 (206)
66 3umb_A Dehalogenase-like hydro 96.6 0.01 3.5E-07 55.6 9.8 81 255-345 98-183 (233)
67 2i6x_A Hydrolase, haloacid deh 96.5 0.0015 5.3E-08 60.5 4.1 87 254-345 87-178 (211)
68 3um9_A Haloacid dehalogenase, 96.5 0.0065 2.2E-07 56.6 8.3 79 256-344 96-179 (230)
69 3nas_A Beta-PGM, beta-phosphog 96.5 0.0051 1.7E-07 57.8 7.5 76 257-344 93-173 (233)
70 4ap9_A Phosphoserine phosphata 96.5 0.0052 1.8E-07 55.8 7.2 39 256-298 79-117 (201)
71 4eze_A Haloacid dehalogenase-l 96.5 0.0038 1.3E-07 65.1 6.8 80 256-345 179-273 (317)
72 3mc1_A Predicted phosphatase, 96.4 0.0049 1.7E-07 57.4 6.9 80 256-345 86-170 (226)
73 3iru_A Phoshonoacetaldehyde hy 96.4 0.0062 2.1E-07 58.4 7.7 81 256-345 111-197 (277)
74 3smv_A S-(-)-azetidine-2-carbo 96.4 0.0023 7.7E-08 59.6 4.5 82 256-351 99-191 (240)
75 2p11_A Hypothetical protein; p 96.4 0.0012 4.2E-08 63.2 2.5 78 255-345 95-172 (231)
76 2no4_A (S)-2-haloacid dehaloge 96.4 0.012 4.2E-07 55.9 9.3 79 256-344 105-188 (240)
77 3nuq_A Protein SSM1, putative 96.3 0.0072 2.5E-07 59.3 7.6 80 255-344 141-232 (282)
78 1qq5_A Protein (L-2-haloacid d 96.3 0.012 4.1E-07 56.8 9.1 78 255-344 92-174 (253)
79 2zg6_A Putative uncharacterize 96.3 0.049 1.7E-06 51.6 12.7 90 254-358 93-189 (220)
80 3k1z_A Haloacid dehalogenase-l 96.2 0.032 1.1E-06 54.6 11.6 91 255-357 105-202 (263)
81 2w43_A Hypothetical 2-haloalka 96.2 0.014 4.7E-07 54.1 8.4 77 255-345 73-154 (201)
82 3p96_A Phosphoserine phosphata 96.2 0.011 3.7E-07 62.9 8.7 86 256-345 256-350 (415)
83 3qxg_A Inorganic pyrophosphata 96.2 0.011 3.8E-07 56.3 7.9 81 256-345 109-194 (243)
84 3umc_A Haloacid dehalogenase; 96.1 0.0053 1.8E-07 58.2 5.4 77 255-344 119-200 (254)
85 2go7_A Hydrolase, haloacid deh 96.1 0.023 7.8E-07 51.2 8.9 79 256-345 85-168 (207)
86 3umg_A Haloacid dehalogenase; 96.0 0.0099 3.4E-07 55.9 6.5 77 256-345 116-197 (254)
87 3l5k_A Protein GS1, haloacid d 96.0 0.029 9.8E-07 53.7 9.6 80 256-345 112-201 (250)
88 4g9b_A Beta-PGM, beta-phosphog 95.9 0.038 1.3E-06 53.8 10.3 72 257-344 96-176 (243)
89 3skx_A Copper-exporting P-type 95.7 0.13 4.4E-06 49.7 13.1 41 256-299 144-184 (280)
90 2kou_A Dicer-like protein 4; A 95.4 0.058 2E-06 48.8 8.9 67 625-693 4-81 (102)
91 2p9j_A Hypothetical protein AQ 95.4 0.043 1.5E-06 49.9 7.9 74 258-345 38-111 (162)
92 2qlt_A (DL)-glycerol-3-phospha 95.0 0.055 1.9E-06 53.4 8.1 80 255-345 113-205 (275)
93 4gib_A Beta-phosphoglucomutase 95.0 0.062 2.1E-06 52.4 8.4 73 257-345 117-198 (250)
94 2fi1_A Hydrolase, haloacid deh 94.9 0.075 2.5E-06 48.2 8.0 76 257-345 83-163 (190)
95 3vay_A HAD-superfamily hydrola 94.9 0.015 5E-07 54.4 3.4 82 255-352 104-192 (230)
96 2g80_A Protein UTR4; YEL038W, 94.8 0.049 1.7E-06 54.9 7.3 35 255-296 124-158 (253)
97 2i7d_A 5'(3')-deoxyribonucleot 94.8 0.02 6.8E-07 53.9 4.1 39 256-297 73-112 (193)
98 1l7m_A Phosphoserine phosphata 94.8 0.074 2.5E-06 48.6 7.8 41 256-299 76-116 (211)
99 2gmw_A D,D-heptose 1,7-bisphos 94.8 0.029 9.9E-07 54.0 5.3 39 258-299 52-105 (211)
100 3bwv_A Putative 5'(3')-deoxyri 94.8 0.057 1.9E-06 50.1 7.1 27 255-285 68-94 (180)
101 2i33_A Acid phosphatase; HAD s 94.7 0.025 8.6E-07 57.6 4.8 38 257-297 102-142 (258)
102 3i28_A Epoxide hydrolase 2; ar 94.3 0.026 8.8E-07 58.8 4.0 79 255-345 99-188 (555)
103 1q92_A 5(3)-deoxyribonucleotid 93.9 0.15 5.3E-06 48.0 8.0 47 255-304 74-121 (197)
104 3ocu_A Lipoprotein E; hydrolas 93.9 0.12 4.1E-06 53.7 7.9 74 258-343 103-182 (262)
105 1k1e_A Deoxy-D-mannose-octulos 93.8 0.12 4.1E-06 48.5 7.0 69 263-345 42-110 (180)
106 3mmz_A Putative HAD family hyd 93.4 0.058 2E-06 50.8 4.1 67 264-345 47-113 (176)
107 3pct_A Class C acid phosphatas 92.7 0.27 9.2E-06 51.0 8.3 75 257-343 102-182 (260)
108 3n28_A Phosphoserine phosphata 92.7 0.12 4E-06 53.1 5.6 86 256-345 178-272 (335)
109 3mn1_A Probable YRBI family ph 92.7 0.15 5.1E-06 48.5 5.9 68 264-345 54-121 (189)
110 3nvb_A Uncharacterized protein 92.4 0.068 2.3E-06 58.3 3.6 81 259-345 259-339 (387)
111 3zvl_A Bifunctional polynucleo 92.3 0.22 7.6E-06 53.7 7.4 76 257-344 88-184 (416)
112 3e8m_A Acylneuraminate cytidyl 91.8 0.24 8.3E-06 45.0 6.0 81 264-358 39-119 (164)
113 4dw8_A Haloacid dehalogenase-l 91.6 0.33 1.1E-05 47.5 7.2 33 138-171 6-38 (279)
114 3dao_A Putative phosphatse; st 91.6 0.075 2.5E-06 53.0 2.5 35 137-171 21-55 (283)
115 3ij5_A 3-deoxy-D-manno-octulos 90.5 0.33 1.1E-05 47.8 5.8 80 264-358 84-164 (211)
116 2fpr_A Histidine biosynthesis 90.5 0.45 1.5E-05 44.6 6.6 77 256-344 42-143 (176)
117 2r8e_A 3-deoxy-D-manno-octulos 90.5 0.5 1.7E-05 44.6 6.9 80 264-358 61-141 (188)
118 2ah5_A COG0546: predicted phos 90.4 0.37 1.3E-05 45.3 6.0 79 255-345 83-165 (210)
119 3ib6_A Uncharacterized protein 90.4 0.33 1.1E-05 45.5 5.6 90 256-356 34-137 (189)
120 2wm8_A MDP-1, magnesium-depend 89.7 0.32 1.1E-05 45.5 4.9 82 254-345 66-148 (187)
121 3htx_A HEN1; HEN1, small RNA m 87.8 0.4 1.4E-05 57.5 5.0 69 625-696 17-99 (950)
122 1y8a_A Hypothetical protein AF 87.8 0.33 1.1E-05 49.9 3.8 36 257-296 104-139 (332)
123 3n07_A 3-deoxy-D-manno-octulos 87.8 0.29 1E-05 47.4 3.2 81 264-358 60-140 (195)
124 2db2_A KIAA0890 protein; DSRM 86.8 0.85 2.9E-05 42.6 5.5 69 625-695 17-92 (119)
125 2hi0_A Putative phosphoglycola 86.7 0.94 3.2E-05 43.3 6.0 79 255-344 109-192 (240)
126 2hcf_A Hydrolase, haloacid deh 86.6 1.7 5.7E-05 40.3 7.6 81 255-345 92-181 (234)
127 3qnm_A Haloacid dehalogenase-l 86.6 0.88 3E-05 42.1 5.6 86 255-351 106-198 (240)
128 3n1u_A Hydrolase, HAD superfam 86.4 0.51 1.7E-05 45.1 4.0 68 264-345 54-121 (191)
129 2hoq_A Putative HAD-hydrolase 85.8 1 3.6E-05 42.7 5.8 91 255-356 93-190 (241)
130 2gfh_A Haloacid dehalogenase-l 85.6 0.68 2.3E-05 45.6 4.6 87 255-352 120-213 (260)
131 2hdo_A Phosphoglycolate phosph 85.6 0.77 2.6E-05 42.4 4.6 80 255-345 82-166 (209)
132 4ex6_A ALNB; modified rossman 84.4 1.1 3.9E-05 41.8 5.3 80 256-345 104-188 (237)
133 2nyv_A Pgpase, PGP, phosphogly 84.2 1 3.5E-05 42.6 5.0 81 255-345 82-167 (222)
134 2hsz_A Novel predicted phospha 83.2 1.5 5.1E-05 42.2 5.7 80 255-344 113-197 (243)
135 3r4c_A Hydrolase, haloacid deh 81.9 0.78 2.7E-05 44.6 3.2 30 139-168 14-43 (268)
136 2pke_A Haloacid delahogenase-l 81.9 1.2 4.3E-05 42.4 4.5 90 256-357 112-203 (251)
137 3gyg_A NTD biosynthesis operon 80.7 1 3.5E-05 44.6 3.6 16 137-152 22-37 (289)
138 3fzq_A Putative hydrolase; YP_ 80.6 0.94 3.2E-05 43.9 3.3 30 139-169 7-36 (274)
139 2pr7_A Haloacid dehalogenase/e 79.5 1.1 3.8E-05 38.4 3.0 77 259-345 21-102 (137)
140 3l8h_A Putative haloacid dehal 79.1 1.9 6.6E-05 39.3 4.7 77 256-344 27-128 (179)
141 1xpj_A Hypothetical protein; s 78.5 1.4 4.6E-05 39.8 3.4 15 139-153 3-17 (126)
142 3zx4_A MPGP, mannosyl-3-phosph 78.1 0.68 2.3E-05 45.4 1.4 29 138-168 1-29 (259)
143 3d6j_A Putative haloacid dehal 78.0 5.1 0.00018 36.4 7.2 80 256-345 89-173 (225)
144 1te2_A Putative phosphatase; s 77.5 3.5 0.00012 37.6 5.9 80 256-345 94-178 (226)
145 2rbk_A Putative uncharacterize 74.2 1.8 6.2E-05 42.3 3.2 31 139-169 4-34 (261)
146 3pdw_A Uncharacterized hydrola 74.2 1.6 5.6E-05 42.4 2.9 31 139-171 8-38 (266)
147 2pq0_A Hypothetical conserved 74.2 1.8 6.1E-05 42.1 3.1 31 139-170 5-35 (258)
148 3l7y_A Putative uncharacterize 74.1 2 6.9E-05 43.2 3.6 32 138-170 38-70 (304)
149 3dnp_A Stress response protein 73.4 2 6.7E-05 42.3 3.2 31 139-170 8-38 (290)
150 2x4d_A HLHPP, phospholysine ph 72.8 1.6 5.5E-05 41.4 2.4 13 139-151 14-26 (271)
151 2hcf_A Hydrolase, haloacid deh 72.8 1.2 4E-05 41.4 1.4 15 139-153 6-20 (234)
152 2om6_A Probable phosphoserine 72.1 7.5 0.00026 35.7 6.7 85 257-351 100-194 (235)
153 1qyi_A ZR25, hypothetical prot 71.5 2.8 9.4E-05 45.4 4.1 41 255-298 214-254 (384)
154 3d6j_A Putative haloacid dehal 71.2 1.4 4.7E-05 40.3 1.4 15 138-152 7-21 (225)
155 3mpo_A Predicted hydrolase of 71.2 2.1 7E-05 41.9 2.8 31 139-170 7-37 (279)
156 2zos_A MPGP, mannosyl-3-phosph 71.0 1.6 5.4E-05 42.9 1.9 29 139-170 4-32 (249)
157 2amy_A PMM 2, phosphomannomuta 70.7 3 0.0001 40.6 3.8 32 136-169 5-37 (246)
158 2hdo_A Phosphoglycolate phosph 70.7 1.4 4.9E-05 40.5 1.5 14 139-152 6-19 (209)
159 1wr8_A Phosphoglycolate phosph 70.4 2.9 9.8E-05 40.4 3.6 31 139-170 5-35 (231)
160 3pgv_A Haloacid dehalogenase-l 70.3 2.8 9.5E-05 41.6 3.6 32 138-170 22-53 (285)
161 2wf7_A Beta-PGM, beta-phosphog 70.0 1.2 4.2E-05 40.8 0.8 78 256-345 91-173 (221)
162 1te2_A Putative phosphatase; s 70.0 1.4 4.7E-05 40.3 1.2 14 139-152 11-24 (226)
163 2ah5_A COG0546: predicted phos 69.9 1.5 5.1E-05 41.1 1.5 14 139-152 6-19 (210)
164 3qgm_A P-nitrophenyl phosphata 69.8 2.9 9.9E-05 40.6 3.5 31 139-171 10-40 (268)
165 3epr_A Hydrolase, haloacid deh 69.6 2.6 8.7E-05 41.3 3.1 32 138-171 6-37 (264)
166 2c4n_A Protein NAGD; nucleotid 69.4 1.7 5.9E-05 40.3 1.7 15 139-153 5-19 (250)
167 1s2o_A SPP, sucrose-phosphatas 69.2 2.2 7.5E-05 41.9 2.5 27 138-166 4-30 (244)
168 1rlm_A Phosphatase; HAD family 69.1 2.9 0.0001 41.3 3.4 30 139-170 5-36 (271)
169 2hi0_A Putative phosphoglycola 68.8 1.6 5.6E-05 41.6 1.5 14 139-152 6-19 (240)
170 2fdr_A Conserved hypothetical 68.2 1.6 5.5E-05 40.3 1.2 78 256-345 87-171 (229)
171 2pke_A Haloacid delahogenase-l 68.1 1.6 5.4E-05 41.7 1.2 14 139-152 15-28 (251)
172 3cnh_A Hydrolase family protei 68.0 1.6 5.5E-05 39.9 1.2 78 257-345 87-169 (200)
173 4ex6_A ALNB; modified rossman 68.0 1.6 5.5E-05 40.8 1.2 15 138-152 20-34 (237)
174 2om6_A Probable phosphoserine 67.5 1.6 5.6E-05 40.2 1.2 14 139-152 6-19 (235)
175 2hsz_A Novel predicted phospha 67.5 1.8 6.1E-05 41.6 1.5 14 139-152 25-38 (243)
176 1vjr_A 4-nitrophenylphosphatas 67.4 2.3 8E-05 41.2 2.2 30 136-167 16-45 (271)
177 2hoq_A Putative HAD-hydrolase 67.0 1.6 5.6E-05 41.3 1.1 15 139-153 4-18 (241)
178 1rkq_A Hypothetical protein YI 66.9 3.2 0.00011 41.4 3.2 32 139-171 7-38 (282)
179 1yv9_A Hydrolase, haloacid deh 66.1 3.6 0.00012 39.8 3.3 29 138-168 6-34 (264)
180 3cnh_A Hydrolase family protei 65.9 5 0.00017 36.6 4.1 14 139-152 6-19 (200)
181 2nyv_A Pgpase, PGP, phosphogly 64.8 2.2 7.5E-05 40.4 1.4 15 139-153 5-19 (222)
182 2wm8_A MDP-1, magnesium-depend 64.4 6.3 0.00022 36.6 4.5 14 138-151 28-41 (187)
183 2b82_A APHA, class B acid phos 64.3 3.2 0.00011 40.3 2.6 36 258-296 90-125 (211)
184 2obb_A Hypothetical protein; s 64.3 2.9 0.0001 39.5 2.2 33 139-171 5-40 (142)
185 2fue_A PMM 1, PMMH-22, phospho 64.0 4.5 0.00015 40.0 3.6 29 138-168 14-43 (262)
186 1swv_A Phosphonoacetaldehyde h 63.0 3.8 0.00013 39.2 2.8 81 256-345 103-189 (267)
187 3qnm_A Haloacid dehalogenase-l 62.5 2.2 7.7E-05 39.4 1.0 16 138-153 6-21 (240)
188 2gfh_A Haloacid dehalogenase-l 62.0 2.3 7.8E-05 41.9 1.0 18 136-153 17-34 (260)
189 1nrw_A Hypothetical protein, h 62.0 5.3 0.00018 39.7 3.7 30 139-169 6-35 (288)
190 2b30_A Pvivax hypothetical pro 61.5 4.7 0.00016 41.0 3.2 32 139-171 29-61 (301)
191 1xvi_A MPGP, YEDP, putative ma 60.9 3.1 0.00011 41.5 1.8 34 137-171 9-42 (275)
192 2ho4_A Haloacid dehalogenase-l 60.8 3.9 0.00013 38.9 2.4 84 264-351 127-215 (259)
193 3a1c_A Probable copper-exporti 60.1 11 0.00038 37.7 5.7 73 255-344 162-234 (287)
194 2fdr_A Conserved hypothetical 60.1 5.3 0.00018 36.8 3.1 15 139-153 6-20 (229)
195 3f9r_A Phosphomannomutase; try 60.0 5.3 0.00018 39.7 3.3 32 138-170 5-36 (246)
196 2o2x_A Hypothetical protein; s 60.0 7.7 0.00026 37.0 4.3 38 257-297 57-109 (218)
197 1swv_A Phosphonoacetaldehyde h 59.0 9.2 0.00031 36.5 4.7 15 139-153 8-22 (267)
198 2oda_A Hypothetical protein ps 58.7 9.5 0.00033 36.4 4.7 85 256-356 36-127 (196)
199 1u02_A Trehalose-6-phosphate p 58.3 6.3 0.00022 38.5 3.4 33 139-171 3-39 (239)
200 1nf2_A Phosphatase; structural 58.0 6.7 0.00023 38.7 3.6 26 139-166 4-30 (268)
201 4gxt_A A conserved functionall 54.2 9 0.00031 41.3 4.1 41 255-298 220-260 (385)
202 2oda_A Hypothetical protein ps 54.2 3.7 0.00013 39.3 1.0 13 138-150 7-19 (196)
203 3kc2_A Uncharacterized protein 53.9 15 0.00052 39.1 5.7 17 136-152 12-28 (352)
204 1jey_A KU70; double-strand DNA 52.1 12 0.00042 42.6 4.9 87 32-122 340-438 (609)
205 1ltq_A Polynucleotide kinase; 50.6 4.2 0.00014 40.6 0.8 90 255-356 187-292 (301)
206 2oyc_A PLP phosphatase, pyrido 50.1 6.7 0.00023 39.4 2.2 39 130-171 15-53 (306)
207 2wf7_A Beta-PGM, beta-phosphog 49.4 20 0.00068 32.6 5.1 14 139-152 4-17 (221)
208 2hx1_A Predicted sugar phospha 47.9 6.8 0.00023 38.6 1.8 37 131-170 9-45 (284)
209 2pr7_A Haloacid dehalogenase/e 47.1 11 0.00037 32.1 2.7 11 139-149 4-14 (137)
210 1zjj_A Hypothetical protein PH 46.3 8.7 0.0003 37.6 2.3 28 139-168 3-30 (263)
211 3a1c_A Probable copper-exporti 45.6 7.4 0.00025 38.9 1.7 15 139-153 34-48 (287)
212 1l6r_A Hypothetical protein TA 45.3 8.4 0.00029 37.5 2.0 30 139-170 7-37 (227)
213 1jey_B KU80; double-strand DNA 45.2 12 0.00042 42.0 3.5 84 35-122 338-425 (565)
214 3l8h_A Putative haloacid dehal 39.9 18 0.0006 32.9 3.1 14 139-152 3-16 (179)
215 2yj3_A Copper-transporting ATP 46.0 6.1 0.00021 39.4 0.0 75 254-344 134-208 (263)
216 2qvw_A GLP_546_48378_50642; di 39.6 4.4 0.00015 47.8 -1.2 42 624-692 446-497 (756)
217 3ib6_A Uncharacterized protein 33.7 25 0.00084 32.7 3.1 13 139-151 5-17 (189)
218 4fe3_A Cytosolic 5'-nucleotida 31.4 24 0.00082 35.4 2.8 40 255-297 140-179 (297)
219 3ewi_A N-acylneuraminate cytid 28.7 20 0.00067 34.0 1.5 65 264-345 44-110 (168)
220 4as2_A Phosphorylcholine phosp 26.3 17 0.0006 38.3 0.7 9 141-149 29-37 (327)
221 2o2x_A Hypothetical protein; s 26.0 36 0.0012 32.2 2.8 15 138-152 32-46 (218)
222 3k6q_A Putative ligand binding 23.6 2.5E+02 0.0086 27.0 8.0 56 628-691 41-96 (139)
No 1
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.8e-31 Score=292.34 Aligned_cols=162 Identities=26% Similarity=0.500 Sum_probs=131.4
Q ss_pred hHHHhhhccceEEEEeCCcceeecccccchHHHHHHHHHHhhcCCchhhhhchhHHHHHhhchHHHHHhhhccceeeeCC
Q 003896 128 SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDNG 207 (788)
Q Consensus 128 ~~~~lL~~r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~~dP~~~~~~~~E~kr~~~D~~lL~q~~~~d~V~~nG 207 (788)
...+||..|||+||+|||||||||+..+ .+++|+.++.||++.+ .+++.+|+-
T Consensus 17 ~~~rll~~~Kl~LVLDLDeTLiHs~~~~-------~~~~~~~~~~~~~~~~--~~dv~~F~l------------------ 69 (442)
T 3ef1_A 17 NVKRLRQEKRLSLIVXLDQTIIHATVDP-------TVGEWMSDPGNVNYDV--LRDVRSFNL------------------ 69 (442)
T ss_dssp HHHHHHHTTCEEEEECCBTTTEEEECCT-------HHHHHHTCTTSTTTGG--GTTCEEEEE------------------
T ss_pred HHHHHHhcCCeEEEEeeccceecccccc-------ccchhccCCCCcchhh--hccccceee------------------
Confidence 4578999999999999999999999764 4689999999999742 233333320
Q ss_pred eEEEecccccCCCCCCccccccceeecCCCcceeeecCCCCCCceEEEEecCChHHHHHHHHHhccccEEEEEEeCCchH
Q 003896 208 KVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERD 287 (788)
Q Consensus 208 ~~~~~q~E~v~~~~d~~~~~~RpviRl~~~n~~ltrI~P~~r~t~y~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~ 287 (788)
...|....++|||++||| +.+||+ +++++|||+|||||.+.
T Consensus 70 -----------------------------------~~~~~~~~~~~~V~~RPg---l~eFL~-~ls~~yEivIfTas~~~ 110 (442)
T 3ef1_A 70 -----------------------------------QEGPSGYTSCYYIKFRPG---LAQFLQ-KISELYELHIYTMGTKA 110 (442)
T ss_dssp -----------------------------------EETTTTEEEEEEEEECTT---HHHHHH-HHTTTEEEEEECSSCHH
T ss_pred -----------------------------------eeccCCceeEEEEEeCCC---HHHHHH-HHhCCcEEEEEcCCCHH
Confidence 011222357899999999 888999 89999999999999999
Q ss_pred HHHHHHHhhCCCCCccccccccCceEeecC-C--CcccHhhhcccCCCCCCeEEEEeCCccccccCCCCCeEEecCcCCC
Q 003896 288 YALEMWRLLDPEGHLIGSKQLLDRVVCVKS-G--SRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPY 364 (788)
Q Consensus 288 YA~~IlrLLDPdgklF~~r~l~~RIisres-g--~~KsL~rLf~~g~~d~~~VVIIDDR~dVW~~~~~NlI~VVp~Y~py 364 (788)
||..|+++|||+++||. .|+++|++ | ..|+|++||+ +++++||||||++++|..++ |+|.|. +|.||
T Consensus 111 YA~~Vl~~LDp~~~~f~-----~Rl~sRd~cg~~~~KdL~~ll~---rdl~~vvIIDd~p~~~~~~p-N~I~I~-~~~fF 180 (442)
T 3ef1_A 111 YAKEVAKIIDPTGKLFQ-----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVWDWNP-NLIKVV-PYEFF 180 (442)
T ss_dssp HHHHHHHHHCTTSTTTT-----TCEECTTTSSCSSCCCGGGTCS---SCCTTEEEEESCSGGGTTCT-TEEECC-CCCCS
T ss_pred HHHHHHHHhccCCcccc-----ceEEEecCCCCceeeehHHhcC---CCcceEEEEECCHHHhCCCC-CEEEcC-Ccccc
Confidence 99999999999999999 45555533 3 3899999987 48999999999999999998 788765 56656
Q ss_pred C
Q 003896 365 Y 365 (788)
Q Consensus 365 ~ 365 (788)
.
T Consensus 181 ~ 181 (442)
T 3ef1_A 181 V 181 (442)
T ss_dssp T
T ss_pred C
Confidence 5
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.5e-31 Score=284.59 Aligned_cols=214 Identities=24% Similarity=0.429 Sum_probs=162.7
Q ss_pred HhHHHhhhccceEEEEeCCcceeecccccchHHHHHHHHHHhhcCCchhhhhchhHHHHHhhchHHHHHhhhccceeeeC
Q 003896 127 NSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGMSAELKRYMDDRTLLKQYTENDCVMDN 206 (788)
Q Consensus 127 ~~~~~lL~~r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~~dP~~~~~~~~E~kr~~~D~~lL~q~~~~d~V~~n 206 (788)
++..|||..+|++|||||||||||++..+ ....|...+.+|+.. +.++++.|+
T Consensus 8 ~~~~rl~~~~k~~LVlDLD~TLvhS~~~~-------~~~~w~~~~~~~~~~--~~~dv~~f~------------------ 60 (372)
T 3ef0_A 8 ENVKRLRQEKRLSLIVDLDQTIIHATVDP-------TVGEWMSDPGNVNYD--VLRDVRSFN------------------ 60 (372)
T ss_dssp HHHHHHHHHTCEEEEECCBTTTEEEECCT-------HHHHHHTCTTSTTTG--GGTTCEEEE------------------
T ss_pred HHHHHHHhCCCCEEEEcCCCCcccccCcC-------ccchhhccCCCCchh--hhhhhhcee------------------
Confidence 46789999999999999999999998764 347899888888763 223333332
Q ss_pred CeEEEecccccCCCCCCccccccceeecCCCcceeeecCCCCCCceEEEEecCChHHHHHHHHHhccccEEEEEEeCCch
Q 003896 207 GKVFKVQQEEVPPPSENHERIVRPVIRIPERNLVLTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAER 286 (788)
Q Consensus 207 G~~~~~q~E~v~~~~d~~~~~~RpviRl~~~n~~ltrI~P~~r~t~y~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR 286 (788)
+. + .+....++|||++||| +.+||+ ++++.|||+|||++++
T Consensus 61 ---~~----~----------------------------~~~~~~~~~~v~~RPg---~~eFL~-~l~~~yeivI~Tas~~ 101 (372)
T 3ef0_A 61 ---LQ----E----------------------------GPSGYTSCYYIKFRPG---LAQFLQ-KISELYELHIYTMGTK 101 (372)
T ss_dssp ---EE----E----------------------------TTTTEEEEEEEEECTT---HHHHHH-HHHTTEEEEEECSSCH
T ss_pred ---ee----e----------------------------ccCCceEEEEEEECcC---HHHHHH-HHhcCcEEEEEeCCcH
Confidence 00 0 0122356899999999 889999 8999999999999999
Q ss_pred HHHHHHHHhhCCCCCccccccccCceEeecC-CC--cccHhhhcccCCCCCCeEEEEeCCccccccCCCCCeEEecCcCC
Q 003896 287 DYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GS--RKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTP 363 (788)
Q Consensus 287 ~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~--~KsL~rLf~~g~~d~~~VVIIDDR~dVW~~~~~NlI~VVp~Y~p 363 (788)
.||+.|++.|||+++||. .|+++|++ |. .|+|++||+ +++++||||||++++|..++ |+|.|. +|.|
T Consensus 102 ~yA~~vl~~LDp~~~~f~-----~ri~sr~~~g~~~~KdL~~L~~---~dl~~viiiDd~~~~~~~~p-N~I~i~-~~~~ 171 (372)
T 3ef0_A 102 AYAKEVAKIIDPTGKLFQ-----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVWDWNP-NLIKVV-PYEF 171 (372)
T ss_dssp HHHHHHHHHHCTTSCSSS-----SCEECTTTSSCSSCCCGGGTCS---SCCTTEEEEESCSGGGTTCT-TEEECC-CCCC
T ss_pred HHHHHHHHHhccCCceee-----eEEEEecCCCCcceecHHHhcC---CCCceEEEEeCCHHHcCCCC-cEeeeC-Cccc
Confidence 999999999999999998 56666643 33 899999987 48999999999999999998 688765 5666
Q ss_pred CCCc---------h-----------------------------hh--------------hhcccchHHHHHHHhhhcchh
Q 003896 364 YYAP---------Q-----------------------------AE--------------TANAVPVLCVARNVACNVRGC 391 (788)
Q Consensus 364 y~~~---------q-----------------------------~E--------------~~~~~p~L~~a~~VL~~Vh~~ 391 (788)
|... . .+ ....+..|..+.++|.+||..
T Consensus 172 f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~~~~d~D~~L~~~~~~L~~iH~~ 251 (372)
T 3ef0_A 172 FVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAV 251 (372)
T ss_dssp STTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGCSCCCCCCHHHHHHHHHHHHHHH
T ss_pred cCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhccccCChHHHHHHHHHHHHHHHH
Confidence 6421 0 00 012356799999999999999
Q ss_pred hhhhhhHHHHHhhhhhhcccccCCCCCCCCcccccc
Q 003896 392 FFKEFDENLLRSISEVFYEDEAVNLPAAPDVSNYLM 427 (788)
Q Consensus 392 fFk~~De~l~~rI~e~~~e~~~~~~~~~pdV~n~l~ 427 (788)
||+++|...... .-. ..|||..+|-
T Consensus 252 Ff~~~~~~~~~~--------~~~---~~~dv~~ii~ 276 (372)
T 3ef0_A 252 YYEEENDISSRS--------GNH---KHANVGLIIP 276 (372)
T ss_dssp HHHHHHHHHHHT--------TTS---SCCCHHHHHH
T ss_pred HHHHHhhhcccc--------ccc---ccccHHHHHH
Confidence 999998765431 101 2578877664
No 3
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=99.90 E-value=4.5e-24 Score=213.09 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=104.3
Q ss_pred eEEEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCC
Q 003896 252 SVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGL 331 (788)
Q Consensus 252 ~y~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~ 331 (788)
.++|++||| +.+||+ .+++.|||+|||++.+.||+.|++.|||.+.+|.++.+++.+...++...|+|+.|..
T Consensus 55 ~~~v~~RPg---l~eFL~-~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgr--- 127 (204)
T 3qle_A 55 GWRTAKRPG---ADYFLG-YLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNR--- 127 (204)
T ss_dssp EEEEEECTT---HHHHHH-HHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEETTEEECCGGGSCS---
T ss_pred ceeEEeCCC---HHHHHH-HHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEECCeeeecHHHhCC---
Confidence 368999999 899999 8999999999999999999999999999999999888776655433334899998743
Q ss_pred CCCCeEEEEeCCccccccCCCCCeEEecCcCCCCCchhhhhcccchHHHHHH-Hhhhcchhh
Q 003896 332 CHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARN-VACNVRGCF 392 (788)
Q Consensus 332 ~d~~~VVIIDDR~dVW~~~~~NlI~VVp~Y~py~~~q~E~~~~~p~L~~a~~-VL~~Vh~~f 392 (788)
+++.||||||++.+|..+++|+|.|.+|+ ..+++|+....|+|..+.. -..+||...
T Consensus 128 -dl~~vIiIDDsp~~~~~~p~N~I~I~~~~---~~~D~eL~~L~~~L~~L~~~~~~DVR~~L 185 (204)
T 3qle_A 128 -DLSKVIIIDTDPNSYKLQPENAIPMEPWN---GEADDKLVRLIPFLEYLATQQTKDVRPIL 185 (204)
T ss_dssp -CGGGEEEEESCTTTTTTCGGGEEECCCCC---SSCCCHHHHHHHHHHHHHHTCCSCSHHHH
T ss_pred -ChHHEEEEECCHHHHhhCccCceEeeeEC---CCCChhHHHHHHHHHHHhhcChHHHHHHH
Confidence 79999999999999999999999876643 3445566666677766442 245666643
No 4
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.85 E-value=1e-21 Score=190.10 Aligned_cols=102 Identities=21% Similarity=0.239 Sum_probs=86.4
Q ss_pred ceEEEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccC
Q 003896 251 TSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRG 330 (788)
Q Consensus 251 t~y~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g 330 (788)
..+|+++||| +.+||+ ++++.|||+|||++.+.||+.|++.|||.+ +|.++.+++.+...++...|+|+++..
T Consensus 50 ~~~~v~~rPg---~~efL~-~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~-~f~~~~~rd~~~~~k~~~~k~L~~Lg~-- 122 (181)
T 2ght_A 50 HQVYVLKRPH---VDEFLQ-RMGELFECVLFTASLAKYADPVADLLDKWG-AFRARLFRESCVFHRGNYVKDLSRLGR-- 122 (181)
T ss_dssp EEEEEEECTT---HHHHHH-HHHHHSEEEEECSSCHHHHHHHHHHHCTTC-CEEEEECGGGSEEETTEEECCGGGTCS--
T ss_pred EEEEEEeCCC---HHHHHH-HHHhCCCEEEEcCCCHHHHHHHHHHHCCCC-cEEEEEeccCceecCCcEeccHHHhCC--
Confidence 4589999999 888998 788899999999999999999999999997 888776655544334334899998754
Q ss_pred CCCCCeEEEEeCCccccccCCCCCeEEecCc
Q 003896 331 LCHPKMAMVIDDRCKVWEDKDQPRVHVVPAF 361 (788)
Q Consensus 331 ~~d~~~VVIIDDR~dVW~~~~~NlI~VVp~Y 361 (788)
+++.+|||||++..|..+++|+|.+++|+
T Consensus 123 --~~~~~vivdDs~~~~~~~~~ngi~i~~~~ 151 (181)
T 2ght_A 123 --DLRRVLILDNSPASYVFHPDNAVPVASWF 151 (181)
T ss_dssp --CGGGEEEECSCGGGGTTCTTSBCCCCCCS
T ss_pred --CcceEEEEeCCHHHhccCcCCEeEecccc
Confidence 79999999999999999999999876544
No 5
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.82 E-value=1.2e-20 Score=185.46 Aligned_cols=121 Identities=19% Similarity=0.214 Sum_probs=94.0
Q ss_pred ceEEEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccC
Q 003896 251 TSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRG 330 (788)
Q Consensus 251 t~y~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g 330 (788)
..+||++||| +.+||+ .++++|+|.|||++.+.||+.|++.|||.+ +|..+.+++.+...++...|+|+++..
T Consensus 63 ~~~~v~~RPg---v~efL~-~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~-~f~~~l~rd~~~~~k~~~lK~L~~Lg~-- 135 (195)
T 2hhl_A 63 HQVYVLKRPH---VDEFLQ-RMGQLFECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGR-- 135 (195)
T ss_dssp EEEEEEECTT---HHHHHH-HHHHHSEEEEECSSCHHHHHHHHHHHCCSS-CEEEEECGGGCEEETTEEECCGGGSSS--
T ss_pred eeEEEEeCcC---HHHHHH-HHHcCCeEEEEcCCCHHHHHHHHHHhCCcc-cEEEEEEcccceecCCceeeeHhHhCC--
Confidence 4689999999 888888 788889999999999999999999999997 788766655554434344899998754
Q ss_pred CCCCCeEEEEeCCccccccCCCCCeEEecCcCCCCCchhhhhcccchHHHHH
Q 003896 331 LCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVAR 382 (788)
Q Consensus 331 ~~d~~~VVIIDDR~dVW~~~~~NlI~VVp~Y~py~~~q~E~~~~~p~L~~a~ 382 (788)
+++.+|||||++..|..+++|+|.+++|+. ...+.|+....|+|..+.
T Consensus 136 --~~~~~vivDDs~~~~~~~~~ngi~i~~~~~--~~~D~eL~~L~~~L~~l~ 183 (195)
T 2hhl_A 136 --ELSKVIIVDNSPASYIFHPENAVPVQSWFD--DMTDTELLDLIPFFEGLS 183 (195)
T ss_dssp --CGGGEEEEESCGGGGTTCGGGEEECCCCSS--CTTCCHHHHHHHHHHHHH
T ss_pred --ChhHEEEEECCHHHhhhCccCccEEeeecC--CCChHHHHHHHHHHHHHH
Confidence 799999999999999999999998876542 122334444444444443
No 6
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=99.79 E-value=2.6e-20 Score=196.80 Aligned_cols=135 Identities=13% Similarity=0.181 Sum_probs=101.6
Q ss_pred EEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCc-cccccccCceEee-----cCC--CcccHhh
Q 003896 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHL-IGSKQLLDRVVCV-----KSG--SRKSLLN 325 (788)
Q Consensus 254 ~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgkl-F~~r~l~~RIisr-----esg--~~KsL~r 325 (788)
++.+||| +.+||+ .+++.|||+|||++.+.||+.|++.|||.+.+ |.++.+++++.+. +.| ..|+|+.
T Consensus 162 ~~~~RP~---l~eFL~-~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~ 237 (320)
T 3shq_A 162 TELMRPY---LHEFLT-SAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGV 237 (320)
T ss_dssp HHHBCTT---HHHHHH-HHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHH
T ss_pred ceEeCCC---HHHHHH-HHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHH
Confidence 5678999 899999 89999999999999999999999999999987 8877777764322 234 4899999
Q ss_pred hc---ccCCCCCCeEEEEeCCccccccCCCCCeEEecCcCC-CC-CchhhhhcccchHHHHHHHhhhcchhhhh
Q 003896 326 VF---QRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPAFTP-YY-APQAETANAVPVLCVARNVACNVRGCFFK 394 (788)
Q Consensus 326 Lf---~~g~~d~~~VVIIDDR~dVW~~~~~NlI~VVp~Y~p-y~-~~q~E~~~~~p~L~~a~~VL~~Vh~~fFk 394 (788)
|+ ++ .+++.||||||++..|..+++|+|+|.+||-. .. ..+.|+....|+|..+..-..+||..-.+
T Consensus 238 Lw~~~p~--rdl~~tIiIDdsp~~~~~~p~NgI~I~~~~~~~~~~~~D~eL~~L~~~L~~L~~~~~DVr~~~~~ 309 (320)
T 3shq_A 238 IWALYKQ--YNSSNTIMFDDIRRNFLMNPKSGLKIRPFRQAHLNRGTDTELLKLSDYLRKIAHHCPDFNSLNHR 309 (320)
T ss_dssp HHHHCTT--CCGGGEEEEESCGGGGTTSGGGEEECCCCCCHHHHTTTCCHHHHHHHHHHHHHHHCSCGGGCCGG
T ss_pred hhcccCC--CChhHEEEEeCChHHhccCcCceEEeCeEcCCCCCCCccHHHHHHHHHHHHHhccCcchhHHHHH
Confidence 95 22 47999999999999999999999987664410 00 12345555666666655123566654433
No 7
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=99.72 E-value=1e-17 Score=143.01 Aligned_cols=67 Identities=24% Similarity=0.239 Sum_probs=63.3
Q ss_pred CChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 625 ~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
.|||+.||||||++ ...|+|+++.++| |.+.|+++|.|+|+.+|.|.|+|||+|||.||+.||..|.
T Consensus 4 ~n~Kt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~ 73 (76)
T 3adj_A 4 GLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQ 73 (76)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEEEEEECSSSCEEEEEEEEETTEEEECCCBSSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCeEEEeeccCCCCCCcEEEEEEECCEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 58999999999999 5579999998888 9999999999999999999999999999999999999985
No 8
>2dix_A Interferon-inducible double stranded RNA- dependent protein kinase activator A; structure genomics, DSRM domain, hypothetical protein PRKRA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.72 E-value=2.5e-17 Score=143.61 Aligned_cols=69 Identities=25% Similarity=0.279 Sum_probs=64.8
Q ss_pred CCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
+..|||+.||||||+++..|+|+++.+.| |.+.|+++|+|+| .+|+|.|+|||+|||+||+.||+.|..
T Consensus 6 ~~~d~Ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~-~~~~G~G~SKK~Aeq~AA~~aL~~L~~ 76 (84)
T 2dix_A 6 SGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGD-ITCTGEGTSKKLAKHRAAEAAINILKA 76 (84)
T ss_dssp CCCCHHHHHHHHHHHTTCCCEEEEEEEECSSSSCEEEEEEEETT-EEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHcCCCCeEEEEEeECCCCCCeEEEEEEECC-EEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 44799999999999998789999998888 9999999999999 999999999999999999999999964
No 9
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA binding protein; 2.14A {Homo sapiens}
Probab=99.71 E-value=2.1e-17 Score=145.73 Aligned_cols=73 Identities=26% Similarity=0.329 Sum_probs=60.9
Q ss_pred ccCCCCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 619 TNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 619 ~~~~ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
....+..|||+.||||||+++..|+|+++.++| |++.|+++|+|+|+ +|+|.|+|||+|||+||+.||+.|..
T Consensus 8 ~~~~~~kd~Ks~LqE~~q~~~~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~aL~~L~~ 82 (90)
T 3llh_A 8 LAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDT-SCTGQGPSKKAAKHKAAEVALKHLKG 82 (90)
T ss_dssp -----CCCHHHHHHHHHHHTTCCCEEEEEEEC-----CCEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC-
T ss_pred hccccCCCHHHHHHHHHHhcCCCCEEEEEEeECCCCCCcEEEEEEECCE-EEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 344566899999999999997789999998888 99999999999997 79999999999999999999999964
No 10
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=99.71 E-value=2.7e-17 Score=139.14 Aligned_cols=67 Identities=30% Similarity=0.281 Sum_probs=62.3
Q ss_pred CCChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEec-CCHHHHHHHHHHHHHHHHH
Q 003896 624 SYLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMG-KTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 624 s~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~G-sSKKEAEQ~AAK~AL~~L~ 691 (788)
+.|||+.||||||++ ...|+|+++.+ | |.+.|+++|.|+|+.+|+|.| +|||+|||+||+.||..|.
T Consensus 2 ~~d~Kt~LqE~~q~~~~~~p~Y~~~~~-Gp~h~~~F~~~v~v~g~~~~~G~G~~sKK~Aeq~AA~~al~~L~ 72 (73)
T 3adg_A 2 SHVFKSRLQEYAQKYKLPTPVYEIVKE-GPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELA 72 (73)
T ss_dssp CCSHHHHHHHHHHHTTCCCCEEEEEEE-SSTTSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCCCEEEEEeE-CCCCCCeEEEEEEECCEEEEeeeccCCHHHHHHHHHHHHHHHhh
Confidence 369999999999999 55799999875 7 999999999999999999999 9999999999999999884
No 11
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.70 E-value=2.8e-17 Score=147.19 Aligned_cols=76 Identities=16% Similarity=0.323 Sum_probs=68.0
Q ss_pred ccccCCCCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHHh
Q 003896 617 GKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693 (788)
Q Consensus 617 ~~~~~~ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~ 693 (788)
+|-+. +..|||+.||||||+++..|+|+++.+.| |.+.|+++|+|+|+.+|+|.|+|||+|||+||+.||..|...
T Consensus 7 ~m~~~-~~~n~Kt~LqE~~Q~~~~~p~Y~~~~~~Gp~H~~~F~v~v~i~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 84 (97)
T 1x49_A 7 GMASD-TPGFYMDKLNKYRQMHGVAITYKELSTSGPPHDRRFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAVDILDNE 84 (97)
T ss_dssp SSSCC-CTTHHHHHHHHHHHHHTCCEEEEEEEEESCSSSCEEEEEEEESSCCCCCEEESSHHHHHHHHHHHHHHHHTTT
T ss_pred cccCC-CCCCHHHHHHHHHHHcCCCCeEEEEEeeCCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHHhh
Confidence 45444 45799999999999996679999988888 999999999999999999999999999999999999999643
No 12
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing, gene regulation-RNA complex; 2.20A {Homo sapiens}
Probab=99.70 E-value=6.3e-17 Score=142.65 Aligned_cols=67 Identities=21% Similarity=0.252 Sum_probs=62.8
Q ss_pred CChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 625 ~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
.|||+.||||||+. ...|+|+++.++| |.+.|+|+|+|+|+ +|+|.|+|||+|||+||+.||..|..
T Consensus 15 ~d~Ks~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 84 (88)
T 3adl_A 15 SHEVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVHT 84 (88)
T ss_dssp CCHHHHHHHHHHHTTCCCCEEEEEEEESCTTSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHHc
Confidence 59999999999999 4569999998888 99999999999997 99999999999999999999999963
No 13
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA complex, protein-RNA interactions, RNA-bining protein; 1.90A {Xenopus laevis} SCOP: d.50.1.1
Probab=99.70 E-value=3.9e-17 Score=136.62 Aligned_cols=65 Identities=20% Similarity=0.311 Sum_probs=60.8
Q ss_pred ChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 626 LSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 626 dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
.||+.||||||++ ...|+|+++.++| |.+.|+++|.|+|+ +|+|.|+|||+|||.||+.||..|.
T Consensus 1 ~p~s~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~-~~~G~G~sKK~Aeq~AA~~al~~L~ 68 (69)
T 1di2_A 1 MPVGSLQELAVQKGWRLPEYTVAQESGPPHKREFTITCRVETF-VETGSGTSKQVAKRVAAEKLLTKFK 68 (69)
T ss_dssp CHHHHHHHHHHHHTCCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEeecCCHHHHHHHHHHHHHHHHh
Confidence 3799999999999 5569999998888 99999999999998 9999999999999999999999885
No 14
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.70 E-value=7e-17 Score=142.52 Aligned_cols=69 Identities=23% Similarity=0.281 Sum_probs=63.5
Q ss_pred CCCChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 623 PSYLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
+..|||+.||||||++ ...|+|+++.+.| |.+.|+++|+|+|+ +|+|.|+|||+|||+||+.||+.|..
T Consensus 4 ~~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 75 (89)
T 1uhz_A 4 GSSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNE-VATGTGPNKKIAKKNAAEAMLLQLGY 75 (89)
T ss_dssp SSSCHHHHHHHHHHHTTSCCCEEEEEEEESCSTTCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHTS
T ss_pred CCCCHHHHHHHHHHHhCCCCCeEEEEEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHhc
Confidence 3469999999999999 5569999998888 99999999999996 99999999999999999999999963
No 15
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain, DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.69 E-value=1e-16 Score=141.49 Aligned_cols=67 Identities=21% Similarity=0.265 Sum_probs=62.9
Q ss_pred CCChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 624 SYLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 624 s~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
..|||+.||||||++ ...|+|+++.+.| |.+.|+++|+|+|+ +|+|.|+|||+|||.||+.||..|.
T Consensus 15 ~~d~Kt~LqE~~Qk~~~~~P~Y~~~~~~Gp~h~~~F~~~v~i~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~ 84 (89)
T 2cpn_A 15 ECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVS 84 (89)
T ss_dssp CCCHHHHHHHHHHHHTCCCCEEEEEEEECCSSSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCCCeEEEEeeECCCCCCeEEEEEEECCE-EEEeeeCCHHHHHHHHHHHHHHHHH
Confidence 369999999999999 5569999998888 99999999999998 9999999999999999999999985
No 16
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}
Probab=99.69 E-value=1.6e-17 Score=145.49 Aligned_cols=68 Identities=24% Similarity=0.303 Sum_probs=62.3
Q ss_pred CChHHHHHHHHHhC------CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRC------SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 625 ~dyKS~LQE~~QK~------~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
.|||+.||||||++ ...|+|+++.++| |.+.|+|+|+|+|+.+|+|.|+|||+|||+||+.||..|..
T Consensus 1 ~d~Kt~LQE~~Q~~~~~~~~~~~p~Y~~~~~~Gp~H~~~F~v~V~v~g~~~~~G~G~SKK~AEq~AA~~AL~~L~~ 76 (85)
T 2khx_A 1 NDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNF 76 (85)
T ss_dssp CCSCHHHHHHHHHCCCSSSCCCCCCEEECCCCCSSSCCCEEEEEEETTEECCCEEESSHHHHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHhhhhhhcCCCCCceEEEEEeECCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhH
Confidence 48999999999983 4579999988888 99999999999999999999999999999999999988754
No 17
>1t4n_A Ribonuclease III; DSRBD, RNA-binding, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.50.1.1
Probab=99.68 E-value=3e-17 Score=147.18 Aligned_cols=66 Identities=26% Similarity=0.209 Sum_probs=62.0
Q ss_pred CChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCe-EeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGE-KIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 625 ~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gk-k~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
.||||.||||+|+.+..|+|+++.+ | |++.|+|+|+|+|+ .+|+|.|+|||+|||+||+.||+.|.
T Consensus 6 ~D~KT~LQE~~Q~~~~~p~Y~v~~~-GpdH~k~F~v~v~i~~~~~~g~G~G~SKK~AEQ~AA~~AL~~l~ 74 (94)
T 1t4n_A 6 MNAKRQLYSLIGYASLRLHYVTVKK-PTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKK 74 (94)
T ss_dssp HHHHHHHHHHTCSSSSCCEEEECCC-CSSSCCSEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHCHH
T ss_pred CCchHHHHHHHcCCCCCCEEEEeee-CCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 5999999999999977899999765 7 99999999999999 99999999999999999999999886
No 18
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=99.67 E-value=2.5e-17 Score=140.35 Aligned_cols=68 Identities=22% Similarity=0.292 Sum_probs=63.0
Q ss_pred CCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
+..|||+.||||||+++..|+|+++.++| |.+.|+++|.|+| .+|+|.|+|||+|||.||+.||..|.
T Consensus 5 ~~~d~ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~i~~-~~~~G~G~sKK~Aeq~AA~~aL~~L~ 74 (76)
T 1ekz_A 5 DKKSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGS-IVTEGEGNGKKVSKKRAAEKMLVELQ 74 (76)
T ss_dssp CCSCHHHHHHHHHHHTTCCCEEEESSSCCSSSCSCSSEEEEETT-EEEEECCCSTTSSSHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEEeECCCCCCcEEEEEEECC-EEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 45699999999999995559999988888 9999999999999 99999999999999999999999885
No 19
>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.67 E-value=2.9e-16 Score=138.24 Aligned_cols=67 Identities=21% Similarity=0.288 Sum_probs=61.5
Q ss_pred CChHHHHHHHHHhCCCCceEEEEeeeC--CCc-eEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHHh
Q 003896 625 YLSIGVLQEIGKRCSSKVEFRSVVSTS--KDL-QFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693 (788)
Q Consensus 625 ~dyKS~LQE~~QK~~~~peYelveesG--H~~-~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~ 693 (788)
.|||+.||||||+++..++|+ .+.| |.+ .|+|+|+|+|+.+|+|.|+|||+|||+||+.||+.|...
T Consensus 6 ~d~Kt~LqE~~Q~~~~~~~Y~--~~~Gp~H~~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 75 (88)
T 1x48_A 6 SGYIGLVNSFAQKKKLSVNYE--QCEPNSELPQRFICKCKIGQTMYGTGSGVTKQEAKQLAAKEAYQKLLKS 75 (88)
T ss_dssp SCHHHHHHHHHHHTTCCEEEE--ECCCSSSSSCCEEEEEEESSCEEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHcCCCCeeE--EeeCCCCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhc
Confidence 599999999999996677999 4567 998 799999999999999999999999999999999999653
No 20
>2b7t_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l3c_A
Probab=99.67 E-value=1.6e-16 Score=134.63 Aligned_cols=66 Identities=24% Similarity=0.351 Sum_probs=61.6
Q ss_pred CChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 625 ~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
.|||+.||||||+ ...|+|+++.++| |++.|+++|.|+|+.+ +|.|+|||+|||+||+.||..|..
T Consensus 4 ~d~Ks~Lqe~~q~-~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 71 (73)
T 2b7t_A 4 VLPKNALMQLNEI-KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQ 71 (73)
T ss_dssp SSSHHHHHHHHHH-CSCCEEEEEEEECSSSSCEEEEEEESSSSEE-EEEESSHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcC-CCCceEEEEEeeCCCCCCeEEEEEEECCEEE-EeecCCHHHHHHHHHHHHHHHHhc
Confidence 5999999999997 7789999998888 9999999999999886 999999999999999999999863
No 21
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs6_A
Probab=99.67 E-value=3.3e-16 Score=140.87 Aligned_cols=70 Identities=23% Similarity=0.255 Sum_probs=64.4
Q ss_pred CCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECC-eEeEEEecCCHHHHHHHHHHHHHHHHHHhh
Q 003896 624 SYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTG-EKIGVGMGKTRKDAQQQAAENALHYLAEKY 694 (788)
Q Consensus 624 s~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~G-kk~G~G~GsSKKEAEQ~AAK~AL~~L~~~y 694 (788)
..|||+.||||||+++..|+|++ .+.| |.+.|+|+|+|+| +.+|+|.|+|||+|||+||+.||+.|....
T Consensus 5 ~~d~Kt~LqE~~Qk~~~~P~Y~~-~~~Gp~H~~~F~~~V~v~g~~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~ 77 (99)
T 1whq_A 5 SSGIKNFLYAWCGKRKMTPAYEI-RAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSNAARDFVNYLVRIN 77 (99)
T ss_dssp CCSSHHHHHHHHHHTTCCCEEEE-EEEECSSSEEEEEEEECTTCSCCEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCCeEEE-eeecCCCCCeEEEEEEECCeEEEEEeccCCHHHHHHHHHHHHHHHHHhhC
Confidence 35999999999999977899999 7777 9999999999999 799999999999999999999999997533
No 22
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.66 E-value=4.1e-16 Score=139.78 Aligned_cols=79 Identities=19% Similarity=0.202 Sum_probs=68.2
Q ss_pred cccCccccCCCCCChHHHHHHHHHhC-CCCceEEEEeeeCCCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 613 LTEGGKTNLLPSYLSIGVLQEIGKRC-SSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 613 ~~ee~~~~~~ps~dyKS~LQE~~QK~-~~~peYelveesGH~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
+..+..++. ...|||+.||||||++ ...|+|+++.+.|..+.|+++|+|+|+.+|.|.|+|||+|||+||+.||..|.
T Consensus 5 ~~~e~~~~~-~~kd~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~~~F~~~V~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~ 83 (98)
T 1x47_A 5 SSGEFVINP-NGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILI 83 (98)
T ss_dssp SCCCSCCCT-TCCCHHHHHHHHHHHHTCSCCEEEEEECSSSSCCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCccceecC-CCCCHHHHHHHHHHHcCCCCCeEEEEEeECCCCcEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHH
Confidence 344445444 5579999999999999 55699999988883499999999999999999999999999999999999996
Q ss_pred H
Q 003896 692 E 692 (788)
Q Consensus 692 ~ 692 (788)
.
T Consensus 84 ~ 84 (98)
T 1x47_A 84 P 84 (98)
T ss_dssp S
T ss_pred h
Confidence 3
No 23
>1t4o_A Ribonuclease III; RNT1P, DSRBD, RNA-binding, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: d.50.1.1 PDB: 1t4l_B 2lbs_B
Probab=99.66 E-value=1.5e-16 Score=147.59 Aligned_cols=72 Identities=25% Similarity=0.217 Sum_probs=65.0
Q ss_pred CCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCe-EeEEEecCCHHHHHHHHHHHHHHHHH--Hhhh
Q 003896 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGE-KIGVGMGKTRKDAQQQAAENALHYLA--EKYV 695 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gk-k~G~G~GsSKKEAEQ~AAK~AL~~L~--~~yl 695 (788)
...||||.||||||+.+..|+|+++.+ | |++.|+|+|+|+|+ .+|+|.|+|||+|||+||+.||..+. .+|.
T Consensus 6 ~~~D~KT~LQE~~Q~~~~~P~Y~vv~~-GPdH~k~F~v~V~i~g~~~~g~G~G~SKK~AEQ~AA~~AL~~l~~l~Ky~ 82 (117)
T 1t4o_A 6 LDMNAKRQLYSLIGYASLRLHYVTVKK-PTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKMLDFYA 82 (117)
T ss_dssp CCTTHHHHHHHHHCCGGGCCEEEEEEC-CCSSCCCEEEEEECTTCCEEEEEEESSHHHHHHHHHHHHHHCHHHHHHHT
T ss_pred CCCCchHHHHHHHcCCCCCCEEEEeee-CCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346999999999999877799999886 7 99999999999999 99999999999999999999999886 4553
No 24
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.63 E-value=6.5e-16 Score=138.17 Aligned_cols=68 Identities=13% Similarity=0.216 Sum_probs=63.4
Q ss_pred CCCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 622 LPSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 622 ~ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
....|||+.||||||+. ..|+|+++.+.| |.+.|+++|+|+|+.+ +|.|+|||+|||+||+.||..|.
T Consensus 13 ~~~~d~Kt~LqE~~Q~~-~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~aL~~L~ 82 (97)
T 2dmy_A 13 SKAIDLMNALMRLNQIR-PGLQYKLLSQSGPVHAPVFTMSVDVDGTTY-EASGPSKKTAKLHVAVKVLQAMG 82 (97)
T ss_dssp CCSSSCTHHHHHHHHHS-CSCCCEEEEEESCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHhcC-CCceEEEEEeeCCCCCCeEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHhC
Confidence 45579999999999996 789999998888 9999999999999998 99999999999999999999984
No 25
>2l2n_A Hyponastic leave 1; DSRBD, miRNA, RNA binding protein, plant protein; NMR {Arabidopsis thaliana}
Probab=99.63 E-value=4.1e-16 Score=140.93 Aligned_cols=69 Identities=29% Similarity=0.312 Sum_probs=61.4
Q ss_pred CCCChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEec-CCHHHHHHHHHHHHHHHHHH
Q 003896 623 PSYLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMG-KTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~G-sSKKEAEQ~AAK~AL~~L~~ 692 (788)
...|||+.||||||++ ...|+|+++.+ | |.+.|+++|+|+|+.+|+|.| +|||+|||+||+.||..|..
T Consensus 15 ~~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~-Gp~H~~~F~~~V~v~g~~~~~G~G~~SKK~Aeq~AA~~AL~~L~~ 87 (103)
T 2l2n_A 15 NCYVFKSRLQEYAQKYKLPTPVYEIVKE-GPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAK 87 (103)
T ss_dssp ----CTTHHHHHHHHTTCCCCEEEEEEE-SCSSSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEeE-cCCCCCeEEEEEEECCEEEEEeecCCCHHHHHHHHHHHHHHHHhc
Confidence 4479999999999999 55799999875 7 999999999999999999999 99999999999999999974
No 26
>1uil_A Double-stranded RNA-binding motif; structural genomics, DSRM, riken structural genomics/proteomics initiative, RSGI RNA binding protein; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs7_A
Probab=99.62 E-value=7.2e-16 Score=141.61 Aligned_cols=69 Identities=14% Similarity=0.090 Sum_probs=63.3
Q ss_pred CCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEE-----CCeEeEEEecCCHHHHHHHHHHHHHHHHHHh
Q 003896 624 SYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLF-----TGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693 (788)
Q Consensus 624 s~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I-----~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~ 693 (788)
..|||+.||||||+++..|+|+ +.+.| |.+.|+++|+| +|+.+|+|.|+|||+|||+||+.||..|...
T Consensus 25 ~~d~Kt~LqE~~Qk~~~~p~Y~-~~~~Gp~H~~~F~~~V~v~~~~~~~~~~~~G~G~SKK~AEq~AA~~AL~~L~~~ 100 (113)
T 1uil_A 25 LENAKARLNQYFQKEKIQGEYK-YTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHL 100 (113)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCE-EEEESCSTTCEEEEEEEEEETTTTEEEEEECCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHCCCCCeEE-EeeECCCCCCcEEEEEEEeeeccCCEEEEEEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 3599999999999995599999 57778 99999999999 6899999999999999999999999999754
No 27
>2l33_A Interleukin enhancer-binding factor 3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, DRBM; NMR {Homo sapiens}
Probab=99.62 E-value=1.1e-15 Score=136.01 Aligned_cols=65 Identities=26% Similarity=0.341 Sum_probs=61.5
Q ss_pred CChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 625 ~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
.++|+.||||||+++ .|+|+++.++| |++.|+|+|.|+|+.+ .|.|+|||+|||+||+.||..|.
T Consensus 14 ~~~K~~LqEl~Qk~~-~p~Y~~v~~~Gp~H~~~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~ 80 (91)
T 2l33_A 14 KHGKNPVMELNEKRR-GLKYELISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLF 80 (91)
T ss_dssp SSTTCHHHHHHHHCS-SCEEEEEEEEECSSCEEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHhCC-CCeEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHh
Confidence 488999999999999 99999998888 9999999999999886 99999999999999999999985
No 28
>1whn_A Hypothetical protein riken cDNA 2310016K04; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.58 E-value=2.4e-15 Score=141.25 Aligned_cols=67 Identities=22% Similarity=0.135 Sum_probs=63.1
Q ss_pred CCChHHHHHHHHHhC-CCCceEEEEeeeCCCceEEEEEEECCeEeEEEec-CCHHHHHHHHHHHHHHHHH
Q 003896 624 SYLSIGVLQEIGKRC-SSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMG-KTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 624 s~dyKS~LQE~~QK~-~~~peYelveesGH~~~FtveV~I~Gkk~G~G~G-sSKKEAEQ~AAK~AL~~L~ 691 (788)
..|||+.||||||++ ...|+|+++.+ .|.+.|+++|+|+|+.+|.|.| +|||+|||+||+.||+.|.
T Consensus 25 ~~d~Kt~LQE~~Qk~~~~~P~Y~~v~~-~H~~~F~v~V~v~g~~~g~G~G~~SKK~AEQ~AA~~AL~~L~ 93 (128)
T 1whn_A 25 QITPKMCLLEWCRREKLPQPVYETVQR-TIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLRSQG 93 (128)
T ss_dssp TCCHHHHHHHHHHHTTCCCCCCCEEEC-SSSCCEEEEEEETTEEEEESSCBSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCCCeEEEEee-cCCCcEEEEEEECCEEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 469999999999999 56799999877 8999999999999999999999 9999999999999999984
No 29
>2ljh_A Double-stranded RNA-specific editase ADAR; DSRBD, DSRBM, editing, hydrolase; NMR {Drosophila melanogaster}
Probab=99.58 E-value=3.6e-15 Score=137.71 Aligned_cols=65 Identities=23% Similarity=0.383 Sum_probs=60.5
Q ss_pred CCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
...|||+.||||||+ |+|+++.++| |++.|+++|+|+|+.+ +|.|+|||+|||+||+.||+.|..
T Consensus 35 ~~kd~Ks~LQE~~q~----p~Y~~v~~~Gp~H~k~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~ 101 (114)
T 2ljh_A 35 QPKNTVAMLNELRHG----LIYKLESQTGPVHAPLFTISVEVDGQKY-LGQGRSKKVARIEAAATALRSFIQ 101 (114)
T ss_dssp CCSCHHHHHHHHCSC----CEEEEEEEECCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHccC----CeEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHHc
Confidence 346999999999985 9999998888 9999999999999999 999999999999999999998863
No 30
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Probab=99.54 E-value=6.9e-15 Score=143.08 Aligned_cols=71 Identities=18% Similarity=0.380 Sum_probs=65.7
Q ss_pred CCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHHh
Q 003896 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~ 693 (788)
...|||+.||||||+++..|+|+++.+.| |.+.|+++|+|+|+.+|+|.|+|||+|||+||+.||+.|...
T Consensus 11 ~~~n~ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~~ 83 (179)
T 1qu6_A 11 SAGFFMEELNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKE 83 (179)
T ss_dssp SSCSHHHHHHHHHHHHTCCCEEEEEESCBTTTBCCEEEEEESSSSCCCEEECCSSHHHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeeccCCCCCCeEEEEEEECCEEEEecCCCCHHHHHHHHHHHHHHHHhcc
Confidence 44699999999999997679999998888 999999999999999999999999999999999999999743
No 31
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l2k_B
Probab=99.54 E-value=2.2e-14 Score=120.77 Aligned_cols=65 Identities=20% Similarity=0.340 Sum_probs=59.3
Q ss_pred CCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
+..|+|++|||| ...|+|+++.++| |.+.|+++|.|+|+.+ +|.|+|||+|||+||+.||..|..
T Consensus 2 ~~knp~s~L~E~----~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 68 (71)
T 2b7v_A 2 SGKNPVMILNEL----RPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFN 68 (71)
T ss_dssp CSSCHHHHHHHH----CCSCEEEEEECCCCTTTCCEEEEEECSSCEE-EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHh----CCCCEEEEEEeECCCCCceEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHHHh
Confidence 346999999999 4679999998888 9999999999999875 999999999999999999999875
No 32
>3p1x_A Interleukin enhancer-binding factor 3; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.90A {Homo sapiens}
Probab=99.47 E-value=7.6e-14 Score=119.27 Aligned_cols=65 Identities=26% Similarity=0.350 Sum_probs=55.8
Q ss_pred HHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHHhh
Q 003896 628 IGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKY 694 (788)
Q Consensus 628 KS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~y 694 (788)
|+.|++|+|.+ ..|.|+++.++| |++.|+++|.|+|+.+ +|.|+|||+|||+||+.||+.|...|
T Consensus 7 K~pl~~L~q~~-~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~~~ 73 (75)
T 3p1x_A 7 KNPVMELNEKR-RGLKYELISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFPDT 73 (75)
T ss_dssp CCHHHHHHHHS-TTCCEEEEEEESCTTSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHcC-CCCEEEEEEeeCCCCCceEEEEEEECCEEE-EEEECCHHHHHHHHHHHHHHHHHccC
Confidence 44455555554 589999999888 9999999999999988 99999999999999999999996543
No 33
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA complex; 1.70A {Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A 2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A 1jfz_A 1rc5_A
Probab=99.44 E-value=2.1e-13 Score=136.03 Aligned_cols=66 Identities=29% Similarity=0.385 Sum_probs=62.4
Q ss_pred CChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 625 ~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
.|||+.||||||++ ...|+|+++.++| |.+.|+|+|+|+|+ +|+|.|+|||+|||+||+.||+.|.
T Consensus 150 ~~pks~LqE~~q~~~~~~p~Y~~~~~~G~~h~~~F~v~v~v~~~-~~~G~G~skK~Ae~~AA~~AL~~L~ 218 (221)
T 2nug_A 150 KDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLE 218 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHcCCCCceEEEEEeeCCCCCceEEEEEEECCE-EEEEecCCHHHHHHHHHHHHHHHhh
Confidence 59999999999999 6679999998888 99999999999999 9999999999999999999999985
No 34
>1o0w_A Ribonuclease III, RNAse III; TM1102, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.00A {Thermotoga maritima} SCOP: a.149.1.1 d.50.1.1
Probab=99.43 E-value=2.6e-13 Score=138.23 Aligned_cols=68 Identities=32% Similarity=0.373 Sum_probs=63.6
Q ss_pred CChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 625 ~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
.|||+.||||||+. ...|+|+++.++| |.+.|+|+|+|+|+.+|+|.|+|||+|||+||+.||+.|..
T Consensus 179 ~dpkt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 249 (252)
T 1o0w_A 179 FDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKLLK 249 (252)
T ss_dssp SCHHHHHHHHHHHHHSSCCEEEEEEEECCTTSCEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHcCCCCceEEEEeeeCCCCCCeEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 59999999999999 5689999998888 99999999999999999999999999999999999999853
No 35
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein; 2.60A {Homo sapiens}
Probab=99.42 E-value=3.9e-13 Score=136.40 Aligned_cols=71 Identities=20% Similarity=0.265 Sum_probs=64.9
Q ss_pred CCCChHHHHHHHHHhC-CCCceEEEEeeeCCCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHHh
Q 003896 623 PSYLSIGVLQEIGKRC-SSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~-~~~peYelveesGH~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~ 693 (788)
...|||+.||||||++ ...|+|+++.+.|..+.|+++|+|+|+.+|.|.|+|||+|||+||+.||..|...
T Consensus 20 ~~kd~ks~LqE~~q~~~~~~p~Y~~~~~~Gp~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~aL~~L~~~ 91 (232)
T 2yt4_A 20 NGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPD 91 (232)
T ss_dssp TTSCHHHHHHHHHHHTTCCCCEEEEEECSCTTSCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHSTT
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEeeECCCCcEEEEEEECCEEEeecCCCCHHHHHHHHHHHHHHHHHhh
Confidence 4579999999999999 5679999998888339999999999999999999999999999999999999654
No 36
>3n3w_A Ribonuclease III; nuclease domain, ribonuclase III, IDP90862, csgid, structura genomics; 2.21A {Campylobacter jejuni subsp}
Probab=99.32 E-value=1.3e-13 Score=140.72 Aligned_cols=68 Identities=25% Similarity=0.307 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 625 ~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
.|||+.||||||++ ...|+|+++.++| |.+.|+|+|+|+|+.+|+|.|+|||+|||+||+.||+.|..
T Consensus 177 ~dpks~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 247 (248)
T 3n3w_A 177 KDYKTKLQEITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIALEKLGA 247 (248)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cCHHHHHHHHHHHcCCCCCceEEeeccCCCCCceEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHc
Confidence 69999999999999 5679999988888 99999999999999999999999999999999999998853
No 37
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Probab=99.27 E-value=8.4e-12 Score=121.43 Aligned_cols=71 Identities=18% Similarity=0.266 Sum_probs=64.0
Q ss_pred CCCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHHhh
Q 003896 623 PSYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKY 694 (788)
Q Consensus 623 ps~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~y 694 (788)
+..|||++||||||+++..++|++. +.| |.+.|+++|.|+|+.++.|.|+|||+||++||+.||..|....
T Consensus 102 ~~~n~~~~L~E~~qk~~~~~~Y~~~-~~G~~h~~~F~~~v~v~~~~~~~g~g~sKK~Ak~~AA~~al~~L~~~~ 174 (179)
T 1qu6_A 102 SMGNYIGLINRIAQKKRLTVNYEQC-ASGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYLQILSEE 174 (179)
T ss_dssp CCCCCHHHHHHHHHHSCCEEEEEEE-EECSSSSSEEEEEEEEETTBCCEEEESSHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHhcCCcceEEec-CcCCCCCCeEEEEEEECCEEEeeEEECCHHHHHHHHHHHHHHHHhccc
Confidence 4579999999999999877899975 556 9999999999999999999999999999999999999996543
No 38
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomic protein structure initiative; 2.10A {Mycobacterium tuberculosis}
Probab=99.26 E-value=4.4e-13 Score=135.33 Aligned_cols=68 Identities=25% Similarity=0.299 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHhC-CCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHHh
Q 003896 625 YLSIGVLQEIGKRC-SSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEK 693 (788)
Q Consensus 625 ~dyKS~LQE~~QK~-~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~ 693 (788)
.|||+.||||||++ ...|+|+++. +| |.+.|+|+|+|+|+.+|+|.|+|||+|||+||+.||+.|...
T Consensus 162 ~dpkt~Lqe~~q~~~~~~p~Y~~~~-~Gp~h~~~F~v~v~v~g~~~~~G~G~skk~Ae~~AA~~AL~~L~~~ 232 (242)
T 2a11_A 162 LDWKTSLQELTAARGLGAPSYLVTS-TGPDHDKEFTAVVVVMDSEYGSGVGRSKKEAEQKAAAAAWKALEVL 232 (242)
T ss_dssp ------------------------------------------------------------------------
T ss_pred CChHHHHHHHHHHhCCCCCeEEEec-cCCCCCCeEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHhhc
Confidence 58999999999999 4679999987 67 999999999999999999999999999999999999999754
No 39
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Probab=99.25 E-value=1.1e-11 Score=126.01 Aligned_cols=64 Identities=20% Similarity=0.344 Sum_probs=58.9
Q ss_pred CCChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 624 SYLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 624 s~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
..|||++|||| ...|.|+++.++| |.+.|+++|.|+|+.+ +|.|+|||+|||+||+.||..|..
T Consensus 160 ~~d~ks~LqE~----~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~sKK~Aeq~AA~~al~~L~~ 225 (236)
T 2l3j_A 160 GKNPVMILNEL----RPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFN 225 (236)
T ss_dssp SCCHHHHHHHH----CCCEEEEEECCSSSSSSCCEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHhc----CCCCcEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHcc
Confidence 36999999999 5679999998888 9999999999999875 999999999999999999999964
No 40
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Probab=99.17 E-value=6.4e-11 Score=120.25 Aligned_cols=66 Identities=24% Similarity=0.351 Sum_probs=60.7
Q ss_pred CChHHHHHHHHHhCCCCceEEEEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRCSSKVEFRSVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 625 ~dyKS~LQE~~QK~~~~peYelveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
.+||+.|++|++. +..|+|+++.++| |.+.|+++|+|+|+.+ .|.|+|||+|||+||+.||+.|..
T Consensus 4 ~~~K~~l~~l~e~-~~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~l~~ 71 (236)
T 2l3j_A 4 VLPKNALMQLNEI-KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQ 71 (236)
T ss_dssp CCTHHHHHHHHHH-CSSCEEEEEEEESCTTSCEEEEEEEETTEEE-EEEESHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHhhc-CCCceEEEEeccCCCCCCeEEEEEEECCEEE-EEecCChHHHHHHHHHHHHHHHHh
Confidence 5899999999987 4679999998888 9999999999999885 999999999999999999999964
No 41
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein; 2.60A {Homo sapiens}
Probab=99.03 E-value=2e-10 Score=116.53 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=54.3
Q ss_pred CCChHHHHHHHHHhC-CCCceEE--EEeeeC--CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 624 SYLSIGVLQEIGKRC-SSKVEFR--SVVSTS--KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 624 s~dyKS~LQE~~QK~-~~~peYe--lveesG--H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
..|||+.||| ||+. ...|.|+ ++...| |.+.|+++|. ..++.|.|+|||+|||.||+.||..|..
T Consensus 129 ~~d~kt~LqE-~~~~~~~~p~Y~~~~~~~~Gp~h~~~F~~~v~---~~~~~G~G~sKK~Aeq~AA~~aL~~L~~ 198 (232)
T 2yt4_A 129 LLSPYQILHE-CLKRNHGMGDTSIKFEVVPGKNQKSEYVMACG---KHTVRGWCKNKRVGKQLASQKILQLLHP 198 (232)
T ss_dssp CCCHHHHHHH-HHHTSSSCCCEEEECC------CCEEEEEEET---TEEEEEEESSHHHHHHHHHHHHHHHHST
T ss_pred CCChhHHHHH-HHHcCCCCCceEEEEeecCCCCCCCEEEEEEE---EEEEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 3699999999 8887 5679999 666667 9999999886 5689999999999999999999999964
No 42
>3rv0_A K. polysporus DCR1; RNAse III enzyme, RNA binding protein; 2.29A {Vanderwaltozyma polyspora}
Probab=99.01 E-value=3.5e-11 Score=128.62 Aligned_cols=65 Identities=20% Similarity=0.212 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHhCC-C-CceEEEEeeeCCCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRCS-S-KVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 625 ~dyKS~LQE~~QK~~-~-~peYelveesGH~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
.|||+.||||||+++ . .|+|+++.+.|. |+|+|+|+|+.+|+|.|+|||+|||+||+.||+.|..
T Consensus 254 ~d~Kt~LqE~~Q~~~~~~~~~Y~~~~~~Gp---F~v~v~i~~~~~g~G~G~SKK~AEq~AA~~AL~~L~~ 320 (341)
T 3rv0_A 254 KNAKNELAELLQINKLGHKLHYRKLTEMPP---FRVEVKIGDILLDEAEGNSIREAEHRAAMKVLENDEL 320 (341)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cCHHHHHHHHHHHcCCCCCceEEEEeccCC---EEEEEEECCEEEEEEEeCCHHHHHHHHHHHHHHHhhh
Confidence 599999999999984 3 479999876653 9999999999999999999999999999999999974
No 43
>3c4b_A Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding, endonuclease, HEL hydrolase, nucleotide-binding, phosphoprotein, RN binding; HET: MSE; 1.68A {Mus musculus} PDB: 3c4t_A 2eb1_A
Probab=98.86 E-value=2.4e-09 Score=109.23 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=50.0
Q ss_pred hHHHHHHHHHhCCCCceEEEEeeeCCCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHH
Q 003896 627 SIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAE 692 (788)
Q Consensus 627 yKS~LQE~~QK~~~~peYelveesGH~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~ 692 (788)
+|+.||||.|.+...+.|.... ..|.+.|+|.|+|+|+.+|+|.|+|||+|||+||+.||++|..
T Consensus 199 ~k~~l~el~~~~~~~~~~~~~~-~~~~~~f~v~v~v~~~~~~~G~G~SkK~Aeq~AA~~AL~~l~~ 263 (265)
T 3c4b_A 199 PRSPVRELLEMEPETAKFSPAE-RTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKA 263 (265)
T ss_dssp CCCHHHHHHHHCTTTEEECCCE-ECTTSCEEEEEEETTTEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhccCCceeeecc-ccCCCcEEEEEEEecceEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 4455555555553334444311 1389999999999999999999999999999999999999863
No 44
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.57 E-value=0.00037 Score=64.96 Aligned_cols=84 Identities=15% Similarity=0.123 Sum_probs=55.6
Q ss_pred EEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcc----cHhhhccc
Q 003896 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRK----SLLNVFQR 329 (788)
Q Consensus 254 ~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~K----sL~rLf~~ 329 (788)
.+.+.|++.++.++|+ ..-|.++|+|++.+.++..+++.+.-. .+|.. +.+++.+.+..| -+..++..
T Consensus 68 ~~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~----~~i~~~~~~~~kp~~~~~~~~~~~ 139 (205)
T 3m9l_A 68 GSRPAPGAVELVRELA---GRGYRLGILTRNARELAHVTLEAIGLA-DCFAE----ADVLGRDEAPPKPHPGGLLKLAEA 139 (205)
T ss_dssp EEEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTTCG-GGSCG----GGEECTTTSCCTTSSHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHH---hcCCeEEEEeCCchHHHHHHHHHcCch-hhcCc----ceEEeCCCCCCCCCHHHHHHHHHH
Confidence 4567799666666664 345999999999999999999987643 23310 345555444333 34444443
Q ss_pred CCCCCCeEEEEeCCcc
Q 003896 330 GLCHPKMAMVIDDRCK 345 (788)
Q Consensus 330 g~~d~~~VVIIDDR~d 345 (788)
-+++++.++.|+|+..
T Consensus 140 ~g~~~~~~i~iGD~~~ 155 (205)
T 3m9l_A 140 WDVSPSRMVMVGDYRF 155 (205)
T ss_dssp TTCCGGGEEEEESSHH
T ss_pred cCCCHHHEEEECCCHH
Confidence 3357899999999864
No 45
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=97.50 E-value=0.00062 Score=63.80 Aligned_cols=80 Identities=25% Similarity=0.307 Sum_probs=54.4
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCccc----Hhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRKS----LLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~Ks----L~rLf~~ 329 (788)
+++.|++.++.++|+ ...|.+.|.|++.+.++..+++.++-. .+| +.+++.++ +..|- +..++..
T Consensus 83 ~~~~pg~~~~l~~L~---~~g~~~~i~tn~~~~~~~~~l~~~~l~-~~f------d~~~~~~~~~~~KP~p~~~~~a~~~ 152 (216)
T 3kbb_A 83 LKENPGVREALEFVK---SKRIKLALATSTPQREALERLRRLDLE-KYF------DVMVFGDQVKNGKPDPEIYLLVLER 152 (216)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTTCG-GGC------SEEECGGGSSSCTTSTHHHHHHHHH
T ss_pred cccCccHHHHHHHHH---HcCCCcccccCCcHHHHHHHHHhcCCC-ccc------cccccccccCCCcccHHHHHHHHHh
Confidence 456799777777776 577999999999999999999987654 234 45555432 32221 2222221
Q ss_pred CCCCCCeEEEEeCCc
Q 003896 330 GLCHPKMAMVIDDRC 344 (788)
Q Consensus 330 g~~d~~~VVIIDDR~ 344 (788)
-++.++.+|+|+|+.
T Consensus 153 lg~~p~e~l~VgDs~ 167 (216)
T 3kbb_A 153 LNVVPEKVVVFEDSK 167 (216)
T ss_dssp HTCCGGGEEEEECSH
T ss_pred hCCCccceEEEecCH
Confidence 125789999999985
No 46
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=97.36 E-value=0.00026 Score=66.98 Aligned_cols=47 Identities=17% Similarity=0.225 Sum_probs=36.4
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCC-Cccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG-HLIG 304 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdg-klF~ 304 (788)
++++|++.++.+.|+ .+-+.++|.|++.+.++..+++.++-.. .+|.
T Consensus 85 ~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~ 132 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQ---ERNVQVFLISGGFRSIVEHVASKLNIPATNVFA 132 (225)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCccHHHHHHHHH---HCCCcEEEEeCChHHHHHHHHHHcCCCcccEEe
Confidence 457899666666665 3569999999999999999999877653 4665
No 47
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=97.19 E-value=0.0019 Score=60.29 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=48.5
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCC----------C--cccH
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSG----------S--RKSL 323 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg----------~--~KsL 323 (788)
+++|+..++.+.|+ .. |.++|.|++.+.++..+++.++-. .+|. +.+++..++ . .+-|
T Consensus 69 ~~~~g~~~~l~~l~---~~-~~~~i~s~~~~~~~~~~l~~~gl~-~~f~-----~~~~~~~~~~~~~~~~p~p~~~~~~l 138 (206)
T 1rku_A 69 KPLEGAVEFVDWLR---ER-FQVVILSDTFYEFSQPLMRQLGFP-TLLC-----HKLEIDDSDRVVGYQLRQKDPKRQSV 138 (206)
T ss_dssp CCCTTHHHHHHHHH---TT-SEEEEEEEEEHHHHHHHHHHTTCC-CEEE-----EEEEECTTSCEEEEECCSSSHHHHHH
T ss_pred CCCccHHHHHHHHH---hc-CcEEEEECChHHHHHHHHHHcCCc-ceec-----ceeEEcCCceEEeeecCCCchHHHHH
Confidence 46799666555554 23 999999999999999999987655 3453 233332221 1 2234
Q ss_pred hhhcccCCCCCCeEEEEeCCc
Q 003896 324 LNVFQRGLCHPKMAMVIDDRC 344 (788)
Q Consensus 324 ~rLf~~g~~d~~~VVIIDDR~ 344 (788)
+++.. .+..++.|+|+.
T Consensus 139 ~~l~~----~~~~~~~iGD~~ 155 (206)
T 1rku_A 139 IAFKS----LYYRVIAAGDSY 155 (206)
T ss_dssp HHHHH----TTCEEEEEECSS
T ss_pred HHHHh----cCCEEEEEeCCh
Confidence 44432 467889999875
No 48
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.17 E-value=0.0007 Score=61.71 Aligned_cols=80 Identities=14% Similarity=0.151 Sum_probs=51.9
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
+++|+..++.++|+ ...+.++|+|++.+.++..+++.+.-.. +++.+++.+. +..| -+..++..-
T Consensus 89 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~l~~-------~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 158 (214)
T 3e58_A 89 LIFPDVLKVLNEVK---SQGLEIGLASSSVKADIFRALEENRLQG-------FFDIVLSGEEFKESKPNPEIYLTALKQL 158 (214)
T ss_dssp HBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTTCGG-------GCSEEEEGGGCSSCTTSSHHHHHHHHHH
T ss_pred CcCchHHHHHHHHH---HCCCCEEEEeCCcHHHHHHHHHHcCcHh-------heeeEeecccccCCCCChHHHHHHHHHc
Confidence 46799555555554 3459999999999999999999875331 2345666543 2222 233333322
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+++++.++.|+|+..
T Consensus 159 ~~~~~~~~~iGD~~~ 173 (214)
T 3e58_A 159 NVQASRALIIEDSEK 173 (214)
T ss_dssp TCCGGGEEEEECSHH
T ss_pred CCChHHeEEEeccHh
Confidence 257889999999853
No 49
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=97.15 E-value=0.0012 Score=61.40 Aligned_cols=81 Identities=16% Similarity=0.087 Sum_probs=50.7
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-------------CC--
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-------------GS-- 319 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-------------g~-- 319 (788)
++++|++.++.++|+ ..-|.++|+|++.+.++..+++.++-.. +|. .+++.++ +.
T Consensus 74 ~~~~~~~~~~l~~l~---~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~------~~~~~~~~~~~~~~~~~~~~~k~k 143 (217)
T 3m1y_A 74 LPLFEGALELVSALK---EKNYKVVCFSGGFDLATNHYRDLLHLDA-AFS------NTLIVENDALNGLVTGHMMFSHSK 143 (217)
T ss_dssp CCBCBTHHHHHHHHH---TTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEE------EEEEEETTEEEEEEEESCCSTTHH
T ss_pred CcCCCCHHHHHHHHH---HCCCEEEEEcCCchhHHHHHHHHcCcch-hcc------ceeEEeCCEEEeeeccCCCCCCCh
Confidence 457799655555554 3459999999999999999999876542 344 3332221 11
Q ss_pred cccHhhhcccCCCCCCeEEEEeCCcc
Q 003896 320 RKSLLNVFQRGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 320 ~KsL~rLf~~g~~d~~~VVIIDDR~d 345 (788)
..-+..++...+++++.++.|+|+..
T Consensus 144 ~~~~~~~~~~~g~~~~~~i~vGDs~~ 169 (217)
T 3m1y_A 144 GEMLLVLQRLLNISKTNTLVVGDGAN 169 (217)
T ss_dssp HHHHHHHHHHHTCCSTTEEEEECSGG
T ss_pred HHHHHHHHHHcCCCHhHEEEEeCCHH
Confidence 11233333221256788999999853
No 50
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.11 E-value=0.0019 Score=58.84 Aligned_cols=81 Identities=25% Similarity=0.288 Sum_probs=51.2
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++.+.|+ ...|.++|+|++.+.++..+++.+.-.. +| +.+++.+. +..| -+..++..
T Consensus 83 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~f------~~~~~~~~~~~~kp~~~~~~~~~~~ 152 (216)
T 2pib_A 83 LKENPGVREALEFVK---SKRIKLALATSTPQREALERLRRLDLEK-YF------DVMVFGDQVKNGKPDPEIYLLVLER 152 (216)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTTCGG-GC------SEEECGGGSSSCTTSTHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---HCCCCEEEEeCCcHHhHHHHHHhcChHH-hc------CEEeecccCCCCCcCcHHHHHHHHH
Confidence 456799555555554 3459999999999999999999875442 23 34554432 2111 23333322
Q ss_pred CCCCCCeEEEEeCCcc
Q 003896 330 GLCHPKMAMVIDDRCK 345 (788)
Q Consensus 330 g~~d~~~VVIIDDR~d 345 (788)
-+..++.++.|+|+..
T Consensus 153 ~~~~~~~~i~iGD~~~ 168 (216)
T 2pib_A 153 LNVVPEKVVVFEDSKS 168 (216)
T ss_dssp HTCCGGGEEEEECSHH
T ss_pred cCCCCceEEEEeCcHH
Confidence 1247888999999863
No 51
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.02 E-value=0.0043 Score=58.39 Aligned_cols=81 Identities=12% Similarity=0.113 Sum_probs=51.8
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+.+.|++.++.+.|+ ..-|.++|+|++.+.++..+++.+.-.. +++.+++.+. +..| -+..++..
T Consensus 102 ~~~~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 171 (231)
T 3kzx_A 102 FMLNDGAIELLDTLK---ENNITMAIVSNKNGERLRSEIHHKNLTH-------YFDSIIGSGDTGTIKPSPEPVLAALTN 171 (231)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHTTCGG-------GCSEEEEETSSSCCTTSSHHHHHHHHH
T ss_pred ceECcCHHHHHHHHH---HCCCeEEEEECCCHHHHHHHHHHCCchh-------heeeEEcccccCCCCCChHHHHHHHHH
Confidence 456799666666664 3459999999999999999998765331 2345666533 2222 23333332
Q ss_pred CCCCCC-eEEEEeCCcc
Q 003896 330 GLCHPK-MAMVIDDRCK 345 (788)
Q Consensus 330 g~~d~~-~VVIIDDR~d 345 (788)
-++.++ .++.|+|+..
T Consensus 172 lgi~~~~~~v~vGD~~~ 188 (231)
T 3kzx_A 172 INIEPSKEVFFIGDSIS 188 (231)
T ss_dssp HTCCCSTTEEEEESSHH
T ss_pred cCCCcccCEEEEcCCHH
Confidence 224677 8999999864
No 52
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.01 E-value=0.0037 Score=57.71 Aligned_cols=86 Identities=10% Similarity=0.117 Sum_probs=53.1
Q ss_pred EEecCChHHHHHHHHHhccc-cEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCC
Q 003896 255 VRLRPAWEDLRSYLIAKGRK-RFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCH 333 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk-~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d 333 (788)
+.+.|++.++.+.|+ .. .|.++|+|++.+.++..+++.+.-.. +| +.+++.......-+..++..-+++
T Consensus 104 ~~~~~~~~~~l~~l~---~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f------~~~~~~~kpk~~~~~~~~~~lgi~ 173 (234)
T 3ddh_A 104 IELLPGVKETLKTLK---ETGKYKLVVATKGDLLDQENKLERSGLSP-YF------DHIEVMSDKTEKEYLRLLSILQIA 173 (234)
T ss_dssp CCBCTTHHHHHHHHH---HHCCCEEEEEEESCHHHHHHHHHHHTCGG-GC------SEEEEESCCSHHHHHHHHHHHTCC
T ss_pred CCcCccHHHHHHHHH---hCCCeEEEEEeCCchHHHHHHHHHhCcHh-hh------heeeecCCCCHHHHHHHHHHhCCC
Confidence 345689555555553 23 49999999999999999998765431 23 455554322222233333222257
Q ss_pred CCeEEEEeCCc--cccccC
Q 003896 334 PKMAMVIDDRC--KVWEDK 350 (788)
Q Consensus 334 ~~~VVIIDDR~--dVW~~~ 350 (788)
++.++.|+|+. |+-...
T Consensus 174 ~~~~i~iGD~~~~Di~~a~ 192 (234)
T 3ddh_A 174 PSELLMVGNSFKSDIQPVL 192 (234)
T ss_dssp GGGEEEEESCCCCCCHHHH
T ss_pred cceEEEECCCcHHHhHHHH
Confidence 89999999994 555443
No 53
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=96.95 E-value=0.0018 Score=64.65 Aligned_cols=82 Identities=11% Similarity=0.089 Sum_probs=50.7
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCccc----HhhhcccC
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKS----LLNVFQRG 330 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~Ks----L~rLf~~g 330 (788)
+++.|++.++.+.|+ .+-|.++|+|++.+.++..+++.++-.| + ..+++.|++.+.+ .|- +..++..-
T Consensus 129 ~~~~~g~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~l~~~~~~~-l---~~~fd~i~~~~~~-~KP~p~~~~~~~~~l 200 (261)
T 1yns_A 129 AEFFADVVPAVRKWR---EAGMKVYIYSSGSVEAQKLLFGHSTEGD-I---LELVDGHFDTKIG-HKVESESYRKIADSI 200 (261)
T ss_dssp BCCCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHTBTTBC-C---GGGCSEEECGGGC-CTTCHHHHHHHHHHH
T ss_pred cccCcCHHHHHHHHH---hCCCeEEEEeCCCHHHHHHHHHhhcccC-h---HhhccEEEecCCC-CCCCHHHHHHHHHHh
Confidence 467799666555554 4579999999999999999988654211 1 1123455554333 331 22222211
Q ss_pred CCCCCeEEEEeCCc
Q 003896 331 LCHPKMAMVIDDRC 344 (788)
Q Consensus 331 ~~d~~~VVIIDDR~ 344 (788)
++.++.+|+|+|+.
T Consensus 201 g~~p~~~l~VgDs~ 214 (261)
T 1yns_A 201 GCSTNNILFLTDVT 214 (261)
T ss_dssp TSCGGGEEEEESCH
T ss_pred CcCcccEEEEcCCH
Confidence 25788899999984
No 54
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=96.94 E-value=0.0022 Score=58.72 Aligned_cols=83 Identities=11% Similarity=0.107 Sum_probs=51.6
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCC-CCcccccccc---CceEeecC------CCcccHhhh
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE-GHLIGSKQLL---DRVVCVKS------GSRKSLLNV 326 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPd-gklF~~r~l~---~RIisres------g~~KsL~rL 326 (788)
++|+..++.++|+ ..-|.++|+|++.+.++..+++.++-. ..+|...... ........ ...+.|...
T Consensus 83 ~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 83 LTDGIKELVQDLK---NKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred CChhHHHHHHHHH---HCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 6699666666665 356999999999999999999987654 2344311110 11000100 012345555
Q ss_pred cccCCCCCCeEEEEeCCcc
Q 003896 327 FQRGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 327 f~~g~~d~~~VVIIDDR~d 345 (788)
++ .+++.++.|.|+..
T Consensus 160 ~~---~~~~~~~~vGD~~~ 175 (219)
T 3kd3_A 160 KG---LIDGEVIAIGDGYT 175 (219)
T ss_dssp GG---GCCSEEEEEESSHH
T ss_pred hC---CCCCCEEEEECCHh
Confidence 54 46889999999864
No 55
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=96.90 E-value=0.0013 Score=62.44 Aligned_cols=81 Identities=16% Similarity=0.092 Sum_probs=49.9
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhh---CCCCCccccccccCceEeecC-CCccc----Hhhhcc
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL---DPEGHLIGSKQLLDRVVCVKS-GSRKS----LLNVFQ 328 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLL---DPdgklF~~r~l~~RIisres-g~~Ks----L~rLf~ 328 (788)
+.|+..++.+.| .+.|.++|.|++.+.++..+++.| +--| -..+++.+++.+. +..|. +..++.
T Consensus 113 ~~~~~~~~l~~l----~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~----l~~~fd~i~~~~~~~~~KP~~~~~~~~~~ 184 (229)
T 4dcc_A 113 IPTYKLDLLLKL----REKYVVYLLSNTNDIHWKWVCKNAFPYRTFK----VEDYFEKTYLSYEMKMAKPEPEIFKAVTE 184 (229)
T ss_dssp CCHHHHHHHHHH----TTTSEEEEEECCCHHHHHHHHHHTSCBTTBC----HHHHCSEEEEHHHHTCCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHH----HhcCcEEEEECCChHHHHHHHhhhhhhccCC----HHHhCCEEEeecccCCCCCCHHHHHHHHH
Confidence 458855544444 344999999999999999888776 3322 1123456666532 32232 222322
Q ss_pred cCCCCCCeEEEEeCCcc
Q 003896 329 RGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 329 ~g~~d~~~VVIIDDR~d 345 (788)
.-++.++.+|+|+|+..
T Consensus 185 ~~g~~~~~~~~vGD~~~ 201 (229)
T 4dcc_A 185 DAGIDPKETFFIDDSEI 201 (229)
T ss_dssp HHTCCGGGEEEECSCHH
T ss_pred HcCCCHHHeEEECCCHH
Confidence 21257889999999873
No 56
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=96.83 E-value=0.0014 Score=62.18 Aligned_cols=44 Identities=16% Similarity=0.026 Sum_probs=34.7
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccc
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIG 304 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~ 304 (788)
++|++.++.+.|+ ..-+.++|.|++.+.++..+++.+.-+ .+|.
T Consensus 93 ~~~g~~~~l~~l~---~~g~~~~ivS~~~~~~~~~~~~~~g~~-~~~~ 136 (232)
T 3fvv_A 93 LTVQAVDVVRGHL---AAGDLCALVTATNSFVTAPIARAFGVQ-HLIA 136 (232)
T ss_dssp CCHHHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTTCC-EEEE
T ss_pred cCHHHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCCC-EEEE
Confidence 5799666666665 456999999999999999999988765 3454
No 57
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=96.81 E-value=0.014 Score=54.52 Aligned_cols=87 Identities=18% Similarity=0.182 Sum_probs=56.6
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++.+.|+ .. |.+.|+|++.+.++..+++.++-. . +++.+++.+. +..| -+..++..
T Consensus 102 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~~l~-~------~f~~~~~~~~~~~~kp~~~~~~~~~~~ 170 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQ---QQ-FDLYIVTNGVSHTQYKRLRDSGLF-P------FFKDIFVSEDTGFQKPMKEYFNYVFER 170 (238)
T ss_dssp CCBCTTHHHHHHHHH---TT-SEEEEEECSCHHHHHHHHHHTTCG-G------GCSEEEEGGGTTSCTTCHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHH---hc-CeEEEEeCCCHHHHHHHHHHcChH-h------hhheEEEecccCCCCCChHHHHHHHHH
Confidence 456799555555554 23 999999999999999999877432 1 2345665533 2222 24444443
Q ss_pred CC-CCCCeEEEEeCCc--cccccCCC
Q 003896 330 GL-CHPKMAMVIDDRC--KVWEDKDQ 352 (788)
Q Consensus 330 g~-~d~~~VVIIDDR~--dVW~~~~~ 352 (788)
-+ ++++.++.|+|+. |+-.....
T Consensus 171 ~g~~~~~~~i~vGD~~~~Di~~a~~a 196 (238)
T 3ed5_A 171 IPQFSAEHTLIIGDSLTADIKGGQLA 196 (238)
T ss_dssp STTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred cCCCChhHeEEECCCcHHHHHHHHHC
Confidence 33 5789999999995 56655544
No 58
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=96.77 E-value=0.0043 Score=57.72 Aligned_cols=81 Identities=15% Similarity=0.028 Sum_probs=51.8
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCc----ccHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSR----KSLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~----KsL~rLf~~ 329 (788)
+.+.|++.++.+.|+ ..-|.++|+|++.+.++..+++.+.-.. +| +.+++.+. +.. .-+..++..
T Consensus 90 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f------~~~~~~~~~~~~kp~~~~~~~~~~~ 159 (233)
T 3s6j_A 90 IIALPGAVELLETLD---KENLKWCIATSGGIDTATINLKALKLDI-NK------INIVTRDDVSYGKPDPDLFLAAAKK 159 (233)
T ss_dssp CEECTTHHHHHHHHH---HTTCCEEEECSSCHHHHHHHHHTTTCCT-TS------SCEECGGGSSCCTTSTHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCeEEEEeCCchhhHHHHHHhcchhh-hh------heeeccccCCCCCCChHHHHHHHHH
Confidence 456799555555554 3459999999999999999998765432 22 34444432 111 224444433
Q ss_pred CCCCCCeEEEEeCCcc
Q 003896 330 GLCHPKMAMVIDDRCK 345 (788)
Q Consensus 330 g~~d~~~VVIIDDR~d 345 (788)
-+++++.++.|+|+..
T Consensus 160 l~~~~~~~i~iGD~~~ 175 (233)
T 3s6j_A 160 IGAPIDECLVIGDAIW 175 (233)
T ss_dssp TTCCGGGEEEEESSHH
T ss_pred hCCCHHHEEEEeCCHH
Confidence 2357889999999874
No 59
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=96.77 E-value=0.0031 Score=60.95 Aligned_cols=37 Identities=8% Similarity=0.310 Sum_probs=29.6
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHH
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWR 294 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~Ilr 294 (788)
++++|++.++.+.|+ ..-|.++|.|++.+.++..+++
T Consensus 76 ~~~~pg~~~~l~~L~---~~g~~~~ivS~~~~~~~~~~l~ 112 (236)
T 2fea_A 76 AKIREGFREFVAFIN---EHEIPFYVISGGMDFFVYPLLE 112 (236)
T ss_dssp CCBCTTHHHHHHHHH---HHTCCEEEEEEEEHHHHHHHHT
T ss_pred CCCCccHHHHHHHHH---hCCCeEEEEeCCcHHHHHHHHh
Confidence 567899666555554 3569999999999999999887
No 60
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=96.73 E-value=0.0041 Score=59.03 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=52.5
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+.++|++.++.++|+ ..-+.++|+|++.+.++..+++.++-.. +| +.+++.+. +..| -+..++..
T Consensus 109 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f------~~~~~~~~~~~~kp~~~~~~~~~~~ 178 (240)
T 3sd7_A 109 NKIYENMKEILEMLY---KNGKILLVATSKPTVFAETILRYFDIDR-YF------KYIAGSNLDGTRVNKNEVIQYVLDL 178 (240)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHTTCGG-GC------SEEEEECTTSCCCCHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHH---HCCCeEEEEeCCcHHHHHHHHHHcCcHh-hE------EEEEeccccCCCCCCHHHHHHHHHH
Confidence 457799666555554 3459999999999999999999875432 23 45665543 2222 23333322
Q ss_pred CCCC-CCeEEEEeCCcc
Q 003896 330 GLCH-PKMAMVIDDRCK 345 (788)
Q Consensus 330 g~~d-~~~VVIIDDR~d 345 (788)
-+++ ++.++.|+|+..
T Consensus 179 ~g~~~~~~~i~vGD~~~ 195 (240)
T 3sd7_A 179 CNVKDKDKVIMVGDRKY 195 (240)
T ss_dssp HTCCCGGGEEEEESSHH
T ss_pred cCCCCCCcEEEECCCHH
Confidence 2257 889999999863
No 61
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=96.72 E-value=0.0049 Score=59.33 Aligned_cols=82 Identities=17% Similarity=0.069 Sum_probs=52.3
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-C-Ccc----cHhhhcc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-G-SRK----SLLNVFQ 328 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g-~~K----sL~rLf~ 328 (788)
+++.|++.++.+.|+ ...|.++|+|++.+.++..+++.++-. .+|. ..+++.+. + ..| -+..++.
T Consensus 109 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~-----~~i~~~~~~~~~~Kp~~~~~~~~~~ 179 (259)
T 4eek_A 109 VTAIEGAAETLRALR---AAGVPFAIGSNSERGRLHLKLRVAGLT-ELAG-----EHIYDPSWVGGRGKPHPDLYTFAAQ 179 (259)
T ss_dssp CEECTTHHHHHHHHH---HHTCCEEEECSSCHHHHHHHHHHTTCH-HHHC-----SCEECGGGGTTCCTTSSHHHHHHHH
T ss_pred CCcCccHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHhcChH-hhcc-----ceEEeHhhcCcCCCCChHHHHHHHH
Confidence 456799666555554 346899999999999999999877532 2233 11444422 2 222 2333433
Q ss_pred cCCCCCCeEEEEeCCcc
Q 003896 329 RGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 329 ~g~~d~~~VVIIDDR~d 345 (788)
.-+++++.++.|+|+..
T Consensus 180 ~lgi~~~~~i~iGD~~~ 196 (259)
T 4eek_A 180 QLGILPERCVVIEDSVT 196 (259)
T ss_dssp HTTCCGGGEEEEESSHH
T ss_pred HcCCCHHHEEEEcCCHH
Confidence 32357899999999974
No 62
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=96.66 E-value=0.0056 Score=57.67 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=46.4
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
++.|++.++.+.|+ ...+.+.|+|++.+.++..+++. .-. .+|.. +.+++.+. +..| -+..++..-
T Consensus 108 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~----~~~~~~~~~~~~kp~~~~~~~~~~~l 178 (247)
T 3dv9_A 108 ERMPGALEVLTKIK---SEGLTPMVVTGSGQTSLLDRLNH-NFP-GIFQA----NLMVTAFDVKYGKPNPEPYLMALKKG 178 (247)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEECSCC---CHHHHHH-HST-TTCCG----GGEECGGGCSSCTTSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH---HcCCcEEEEcCCchHHHHHHHHh-hHH-HhcCC----CeEEecccCCCCCCCCHHHHHHHHHc
Confidence 45699655555554 34599999999999998888875 222 23410 34444432 1112 133333322
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+++++.+|.|+|+..
T Consensus 179 g~~~~~~i~vGD~~~ 193 (247)
T 3dv9_A 179 GFKPNEALVIENAPL 193 (247)
T ss_dssp TCCGGGEEEEECSHH
T ss_pred CCChhheEEEeCCHH
Confidence 257889999999963
No 63
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=96.65 E-value=0.0016 Score=60.94 Aligned_cols=86 Identities=16% Similarity=0.187 Sum_probs=54.7
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
++.|++.++.+.|+ +.|.++|+|++.+.++..+++.+.-. .+++.+++.+. +..| -+..++..-
T Consensus 100 ~~~~~~~~~l~~l~----~~~~~~i~t~~~~~~~~~~l~~~~~~-------~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 168 (234)
T 3u26_A 100 ELYPEVVEVLKSLK----GKYHVGMITDSDTEQAMAFLDALGIK-------DLFDSITTSEEAGFFKPHPRIFELALKKA 168 (234)
T ss_dssp CBCTTHHHHHHHHT----TTSEEEEEESSCHHHHHHHHHHTTCG-------GGCSEEEEHHHHTBCTTSHHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHH----hCCcEEEEECCCHHHHHHHHHHcCcH-------HHcceeEeccccCCCCcCHHHHHHHHHHc
Confidence 45688555555553 33999999999999999999876532 12345665532 2222 133333322
Q ss_pred CCCCCeEEEEeCCc--cccccCCC
Q 003896 331 LCHPKMAMVIDDRC--KVWEDKDQ 352 (788)
Q Consensus 331 ~~d~~~VVIIDDR~--dVW~~~~~ 352 (788)
+++++.++.|+|+. |+-.....
T Consensus 169 ~~~~~~~~~vGD~~~~Di~~a~~a 192 (234)
T 3u26_A 169 GVKGEEAVYVGDNPVKDCGGSKNL 192 (234)
T ss_dssp TCCGGGEEEEESCTTTTHHHHHTT
T ss_pred CCCchhEEEEcCCcHHHHHHHHHc
Confidence 35789999999996 57655554
No 64
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=96.64 E-value=0.0071 Score=56.92 Aligned_cols=80 Identities=9% Similarity=-0.050 Sum_probs=50.8
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|+..++.+.|+ ..-|.++|.|++.+.++..+++.++-. . +++.+++.+. +..| -+..+...
T Consensus 94 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~l~-~------~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 163 (232)
T 1zrn_A 94 LAPFSEVPDSLRELK---RRGLKLAILSNGSPQSIDAVVSHAGLR-D------GFDHLLSVDPVQVYKPDNRVYELAEQA 163 (232)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTTCG-G------GCSEEEESGGGTCCTTSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHhcChH-h------hhheEEEecccCCCCCCHHHHHHHHHH
Confidence 357799666656564 356999999999999999999876532 1 2345655533 2212 12223221
Q ss_pred CCCCCCeEEEEeCCc
Q 003896 330 GLCHPKMAMVIDDRC 344 (788)
Q Consensus 330 g~~d~~~VVIIDDR~ 344 (788)
-+++++.++.|+|+.
T Consensus 164 ~~~~~~~~~~iGD~~ 178 (232)
T 1zrn_A 164 LGLDRSAILFVASNA 178 (232)
T ss_dssp HTSCGGGEEEEESCH
T ss_pred cCCCcccEEEEeCCH
Confidence 124678889999986
No 65
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=96.63 E-value=0.0012 Score=60.91 Aligned_cols=83 Identities=20% Similarity=0.168 Sum_probs=47.4
Q ss_pred EEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcc
Q 003896 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQ 328 (788)
Q Consensus 254 ~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~ 328 (788)
++++.|+..++.+.|+ ...+.++|.|++.+.++..+++.+ ++-..+++.+++.+. +..| -+..++.
T Consensus 89 ~~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~~~~~------~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 159 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLR---EQGHRVVVLSNTNRLHTTFWPEEY------PEIRDAADHIYLSQDLGMRKPEARIYQHVLQ 159 (206)
T ss_dssp EEEECHHHHHHHHHHH---HTTCEEEEEECCCCCTTSCCGGGC------HHHHHHCSEEEEHHHHTCCTTCHHHHHHHHH
T ss_pred hcccCccHHHHHHHHH---HCCCeEEEEECCChHHHHHHHHhc------cChhhheeeEEEecccCCCCCCHHHHHHHHH
Confidence 4678899555555554 356999999999988866544431 111112345555422 2222 2333332
Q ss_pred cCCCCCCeEEEEeCCcc
Q 003896 329 RGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 329 ~g~~d~~~VVIIDDR~d 345 (788)
.-+++++.+++|+|+..
T Consensus 160 ~~~~~~~~~~~vgD~~~ 176 (206)
T 2b0c_A 160 AEGFSPSDTVFFDDNAD 176 (206)
T ss_dssp HHTCCGGGEEEEESCHH
T ss_pred HcCCCHHHeEEeCCCHH
Confidence 22256788999999865
No 66
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=96.56 E-value=0.01 Score=55.57 Aligned_cols=81 Identities=10% Similarity=-0.025 Sum_probs=51.0
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++.+.|+ ..-|.++|+|++.+.++..+++.++-.. +| +.+++.+. +..| -+..++..
T Consensus 98 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f------~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (233)
T 3umb_A 98 LSAFPENVPVLRQLR---EMGLPLGILSNGNPQMLEIAVKSAGMSG-LF------DHVLSVDAVRLYKTAPAAYALAPRA 167 (233)
T ss_dssp CEECTTHHHHHHHHH---TTTCCEEEEESSCHHHHHHHHHTTTCTT-TC------SEEEEGGGTTCCTTSHHHHTHHHHH
T ss_pred CCCCCCHHHHHHHHH---hCCCcEEEEeCCCHHHHHHHHHHCCcHh-hc------CEEEEecccCCCCcCHHHHHHHHHH
Confidence 456799555555554 3449999999999999999998765432 23 45555543 2222 12323222
Q ss_pred CCCCCCeEEEEeCCcc
Q 003896 330 GLCHPKMAMVIDDRCK 345 (788)
Q Consensus 330 g~~d~~~VVIIDDR~d 345 (788)
-+++++.++.|+|+..
T Consensus 168 ~~~~~~~~~~vGD~~~ 183 (233)
T 3umb_A 168 FGVPAAQILFVSSNGW 183 (233)
T ss_dssp HTSCGGGEEEEESCHH
T ss_pred hCCCcccEEEEeCCHH
Confidence 1257888999999853
No 67
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=96.54 E-value=0.0015 Score=60.55 Aligned_cols=87 Identities=14% Similarity=0.085 Sum_probs=50.6
Q ss_pred EEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcc
Q 003896 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQ 328 (788)
Q Consensus 254 ~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~ 328 (788)
++++.|++.++.+.|+ +.|.++|+|++.+.++..+++.|-.... ++-..+++.+++.+. +..| -+..++.
T Consensus 87 ~~~~~~~~~~~l~~l~----~g~~~~i~t~~~~~~~~~~~~~l~~~~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 161 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLR----PDYRLFLLSNTNPYVLDLAMSPRFLPSG-RTLDSFFDKVYASCQMGKYKPNEDIFLEMIA 161 (211)
T ss_dssp EEEECHHHHHHHHHHT----TTSEEEEEECCCHHHHHHHTSTTSSTTC-CCGGGGSSEEEEHHHHTCCTTSHHHHHHHHH
T ss_pred hcccChHHHHHHHHHH----cCCeEEEEeCCCHHHHHHHHhhhccccc-cCHHHHcCeEEeecccCCCCCCHHHHHHHHH
Confidence 4577899555555554 3799999999999998887765210000 111123355655432 2222 2222322
Q ss_pred cCCCCCCeEEEEeCCcc
Q 003896 329 RGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 329 ~g~~d~~~VVIIDDR~d 345 (788)
.-+++++.++.|+|+..
T Consensus 162 ~~~~~~~~~~~igD~~~ 178 (211)
T 2i6x_A 162 DSGMKPEETLFIDDGPA 178 (211)
T ss_dssp HHCCCGGGEEEECSCHH
T ss_pred HhCCChHHeEEeCCCHH
Confidence 21257889999999865
No 68
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=96.53 E-value=0.0065 Score=56.57 Aligned_cols=79 Identities=6% Similarity=-0.077 Sum_probs=50.0
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
++.|++.++.+.|+ ..-|.++|+|++.+.++..+++.+.-. . +++.+++.+. +..| -+..++..-
T Consensus 96 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~l~-~------~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 165 (230)
T 3um9_A 96 TPFADVPQALQQLR---AAGLKTAILSNGSRHSIRQVVGNSGLT-N------SFDHLISVDEVRLFKPHQKVYELAMDTL 165 (230)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHHTCG-G------GCSEEEEGGGTTCCTTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH---hCCCeEEEEeCCCHHHHHHHHHHCCCh-h------hcceeEehhhcccCCCChHHHHHHHHHh
Confidence 45689555555554 345999999999999999999876532 1 2345655533 2222 133333221
Q ss_pred CCCCCeEEEEeCCc
Q 003896 331 LCHPKMAMVIDDRC 344 (788)
Q Consensus 331 ~~d~~~VVIIDDR~ 344 (788)
+.+++.++.|+|+.
T Consensus 166 ~~~~~~~~~iGD~~ 179 (230)
T 3um9_A 166 HLGESEILFVSCNS 179 (230)
T ss_dssp TCCGGGEEEEESCH
T ss_pred CCCcccEEEEeCCH
Confidence 25788899999986
No 69
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=96.51 E-value=0.0051 Score=57.76 Aligned_cols=76 Identities=17% Similarity=0.121 Sum_probs=43.5
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccCC
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRGL 331 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g~ 331 (788)
+.|++.++.++|+ ..-|.+.|+|++.+ +..+++.+.-.. +| +.+++.+. +..| -+..++..-+
T Consensus 93 ~~~~~~~~l~~l~---~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f------~~i~~~~~~~~~Kp~~~~~~~~~~~lg 160 (233)
T 3nas_A 93 LLPGIGRLLCQLK---NENIKIGLASSSRN--APKILRRLAIID-DF------HAIVDPTTLAKGKPDPDIFLTAAAMLD 160 (233)
T ss_dssp SCTTHHHHHHHHH---HTTCEEEECCSCTT--HHHHHHHTTCTT-TC------SEECCC---------CCHHHHHHHHHT
T ss_pred cCcCHHHHHHHHH---HCCCcEEEEcCchh--HHHHHHHcCcHh-hc------CEEeeHhhCCCCCCChHHHHHHHHHcC
Confidence 4589555555554 34599999999966 777777665332 23 33444322 1112 2333333222
Q ss_pred CCCCeEEEEeCCc
Q 003896 332 CHPKMAMVIDDRC 344 (788)
Q Consensus 332 ~d~~~VVIIDDR~ 344 (788)
++++.+|.|+|+.
T Consensus 161 i~~~~~i~vGDs~ 173 (233)
T 3nas_A 161 VSPADCAAIEDAE 173 (233)
T ss_dssp SCGGGEEEEECSH
T ss_pred CCHHHEEEEeCCH
Confidence 5788999999985
No 70
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=96.49 E-value=0.0052 Score=55.84 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=29.2
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDP 298 (788)
+++|+..++.++|+ ..-|.++|+|++.+.++..+ +.+.-
T Consensus 79 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~-~~~~~ 117 (201)
T 4ap9_A 79 NVSPEARELVETLR---EKGFKVVLISGSFEEVLEPF-KELGD 117 (201)
T ss_dssp CCCHHHHHHHHHHH---HTTCEEEEEEEEETTTSGGG-TTTSS
T ss_pred CCChhHHHHHHHHH---HCCCeEEEEeCCcHHHHHHH-HHcCc
Confidence 56788555555554 34599999999999999888 76653
No 71
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=96.45 E-value=0.0038 Score=65.08 Aligned_cols=80 Identities=10% Similarity=0.113 Sum_probs=51.3
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCC-----------Ccc---
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSG-----------SRK--- 321 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg-----------~~K--- 321 (788)
+++|++.++.+.|+ ..-|.++|.|++.+.++..+++.+.-+ .+|. .+++.++| ..|
T Consensus 179 ~l~pg~~e~L~~Lk---~~G~~v~IvSn~~~~~~~~~l~~lgl~-~~f~------~~l~~~dg~~tg~i~~~~~~~kpkp 248 (317)
T 4eze_A 179 TLSPGLLTILPVIK---AKGFKTAIISGGLDIFTQRLKARYQLD-YAFS------NTVEIRDNVLTDNITLPIMNAANKK 248 (317)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHTCS-EEEE------ECEEEETTEEEEEECSSCCCHHHHH
T ss_pred EECcCHHHHHHHHH---hCCCEEEEEeCccHHHHHHHHHHcCCC-eEEE------EEEEeeCCeeeeeEecccCCCCCCH
Confidence 48899766666665 456999999999999999999987654 2444 22222211 111
Q ss_pred -cHhhhcccCCCCCCeEEEEeCCcc
Q 003896 322 -SLLNVFQRGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 322 -sL~rLf~~g~~d~~~VVIIDDR~d 345 (788)
-+..++...+.+++.++.|+|+..
T Consensus 249 ~~~~~~~~~lgv~~~~~i~VGDs~~ 273 (317)
T 4eze_A 249 QTLVDLAARLNIATENIIACGDGAN 273 (317)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHH
Confidence 233333322246788999999853
No 72
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=96.45 E-value=0.0049 Score=57.43 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=50.9
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCC-Ccc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSG-SRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg-~~K----sL~rLf~~g 330 (788)
++.|++.++.+.|+ ..-|.++|+|++.+.++..+++.++-. .+++.+++.+.. ..| -+..++..-
T Consensus 86 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~l~-------~~f~~~~~~~~~~~~kp~~~~~~~~~~~l 155 (226)
T 3mc1_A 86 KVYDGIEALLSSLK---DYGFHLVVATSKPTVFSKQILEHFKLA-------FYFDAIVGSSLDGKLSTKEDVIRYAMESL 155 (226)
T ss_dssp CBCTTHHHHHHHHH---HHTCEEEEEEEEEHHHHHHHHHHTTCG-------GGCSEEEEECTTSSSCSHHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHHhCCH-------hheeeeeccCCCCCCCCCHHHHHHHHHHh
Confidence 45699555555554 245999999999999999999877533 123456665432 122 123332221
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+.+++.++.|+|+..
T Consensus 156 gi~~~~~i~iGD~~~ 170 (226)
T 3mc1_A 156 NIKSDDAIMIGDREY 170 (226)
T ss_dssp TCCGGGEEEEESSHH
T ss_pred CcCcccEEEECCCHH
Confidence 246789999999864
No 73
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=96.43 E-value=0.0062 Score=58.38 Aligned_cols=81 Identities=16% Similarity=0.091 Sum_probs=50.5
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCC-Ccc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSG-SRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg-~~K----sL~rLf~~g 330 (788)
++.|++.++.+.|+ ..-|.+.|+|++.+.++..+++.+.-.+..| +.+++.+.. ..| -+..++..-
T Consensus 111 ~~~~~~~~~l~~l~---~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~kp~~~~~~~~~~~l 181 (277)
T 3iru_A 111 QLIPGWKEVFDKLI---AQGIKVGGNTGYGPGMMAPALIAAKEQGYTP------ASTVFATDVVRGRPFPDMALKVALEL 181 (277)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHHHTTCCC------SEEECGGGSSSCTTSSHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHH---HcCCeEEEEeCCchHHHHHHHHhcCcccCCC------ceEecHHhcCCCCCCHHHHHHHHHHc
Confidence 56689555555554 3459999999999999999998754332213 345554331 112 233333322
Q ss_pred CCCC-CeEEEEeCCcc
Q 003896 331 LCHP-KMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~-~~VVIIDDR~d 345 (788)
++.+ +.++.|+|+..
T Consensus 182 gi~~~~~~i~vGD~~~ 197 (277)
T 3iru_A 182 EVGHVNGCIKVDDTLP 197 (277)
T ss_dssp TCSCGGGEEEEESSHH
T ss_pred CCCCCccEEEEcCCHH
Confidence 2577 88999999863
No 74
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=96.43 E-value=0.0023 Score=59.56 Aligned_cols=82 Identities=15% Similarity=0.126 Sum_probs=51.9
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc--------cHhhh
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK--------SLLNV 326 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K--------sL~rL 326 (788)
++.|++.++.+.|+ +.|.++|+|++.+.++..+++.|+ .+| +.+++.++ +..| -|+.
T Consensus 99 ~~~~~~~~~l~~l~----~~~~~~i~tn~~~~~~~~~l~~l~---~~f------d~i~~~~~~~~~KP~~~~~~~~l~~- 164 (240)
T 3smv_A 99 PAFPDTVEALQYLK----KHYKLVILSNIDRNEFKLSNAKLG---VEF------DHIITAQDVGSYKPNPNNFTYMIDA- 164 (240)
T ss_dssp CBCTTHHHHHHHHH----HHSEEEEEESSCHHHHHHHHTTTC---SCC------SEEEEHHHHTSCTTSHHHHHHHHHH-
T ss_pred CCCCcHHHHHHHHH----hCCeEEEEeCCChhHHHHHHHhcC---Ccc------CEEEEccccCCCCCCHHHHHHHHHH-
Confidence 45689666666664 359999999999999998887654 233 45555532 2222 2221
Q ss_pred cccCCCCCCeEEEEeCCc--cccccCC
Q 003896 327 FQRGLCHPKMAMVIDDRC--KVWEDKD 351 (788)
Q Consensus 327 f~~g~~d~~~VVIIDDR~--dVW~~~~ 351 (788)
+..-+++++.+|.|+|+. |+-....
T Consensus 165 ~~~lgi~~~~~~~vGD~~~~Di~~a~~ 191 (240)
T 3smv_A 165 LAKAGIEKKDILHTAESLYHDHIPAND 191 (240)
T ss_dssp HHHTTCCGGGEEEEESCTTTTHHHHHH
T ss_pred HHhcCCCchhEEEECCCchhhhHHHHH
Confidence 222225789999999984 6654443
No 75
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=96.39 E-value=0.0012 Score=63.23 Aligned_cols=78 Identities=12% Similarity=0.014 Sum_probs=49.1
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCC
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHP 334 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~ 334 (788)
+++.|++.++.+.|+ +...+.|.|++.+.++..+++.++-. .+|. .+++.......-|..+.. ++.+
T Consensus 95 ~~~~~g~~~~l~~l~----~~g~~~i~Tn~~~~~~~~~l~~~gl~-~~f~------~~~~~~~~K~~~~~~~~~--~~~~ 161 (231)
T 2p11_A 95 SRVYPGALNALRHLG----ARGPTVILSDGDVVFQPRKIARSGLW-DEVE------GRVLIYIHKELMLDQVME--CYPA 161 (231)
T ss_dssp GGBCTTHHHHHHHHH----TTSCEEEEEECCSSHHHHHHHHTTHH-HHTT------TCEEEESSGGGCHHHHHH--HSCC
T ss_pred CCcCccHHHHHHHHH----hCCCEEEEeCCCHHHHHHHHHHcCcH-HhcC------eeEEecCChHHHHHHHHh--cCCC
Confidence 356799666666664 32379999999999999999976533 2444 222221111123444433 2578
Q ss_pred CeEEEEeCCcc
Q 003896 335 KMAMVIDDRCK 345 (788)
Q Consensus 335 ~~VVIIDDR~d 345 (788)
+.+++|+|+..
T Consensus 162 ~~~~~vgDs~~ 172 (231)
T 2p11_A 162 RHYVMVDDKLR 172 (231)
T ss_dssp SEEEEECSCHH
T ss_pred ceEEEEcCccc
Confidence 89999999974
No 76
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=96.37 E-value=0.012 Score=55.86 Aligned_cols=79 Identities=10% Similarity=0.064 Sum_probs=49.9
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
++.|++.++.+.|+ ..-|.++|.|++.+.++..+++.++-.. +++.+++.+. +..| -+..++..-
T Consensus 105 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~l~~-------~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 174 (240)
T 2no4_A 105 SAYPDAAETLEKLK---SAGYIVAILSNGNDEMLQAALKASKLDR-------VLDSCLSADDLKIYKPDPRIYQFACDRL 174 (240)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTTCGG-------GCSEEEEGGGTTCCTTSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH---HCCCEEEEEcCCCHHHHHHHHHhcCcHH-------HcCEEEEccccCCCCCCHHHHHHHHHHc
Confidence 46699555555554 3469999999999999999998765331 2345665533 2212 133332221
Q ss_pred CCCCCeEEEEeCCc
Q 003896 331 LCHPKMAMVIDDRC 344 (788)
Q Consensus 331 ~~d~~~VVIIDDR~ 344 (788)
+++++.++.|+|+.
T Consensus 175 ~~~~~~~~~iGD~~ 188 (240)
T 2no4_A 175 GVNPNEVCFVSSNA 188 (240)
T ss_dssp TCCGGGEEEEESCH
T ss_pred CCCcccEEEEeCCH
Confidence 24678899999985
No 77
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=96.32 E-value=0.0072 Score=59.34 Aligned_cols=80 Identities=16% Similarity=0.135 Sum_probs=49.4
Q ss_pred EEecCChHHHHHHHHHhccccE--EEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-----CCcc----cH
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRF--EVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-----GSRK----SL 323 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~F--ElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-----g~~K----sL 323 (788)
+++.|+..++.+.|+ ...| .+.|+|++.+.++..+++.++-.. +|. .+++.+. +..| -+
T Consensus 141 ~~~~p~~~~~L~~L~---~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~fd------~v~~~~~~~~~~~~~Kp~~~~~ 210 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLR---QSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LFD------GLTYCDYSRTDTLVCKPHVKAF 210 (282)
T ss_dssp CCCCHHHHHHHHHHH---HSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SCS------EEECCCCSSCSSCCCTTSHHHH
T ss_pred cCcChhHHHHHHHHH---hCCCCceEEEEECCChHHHHHHHHhCCccc-ccc------eEEEeccCCCcccCCCcCHHHH
Confidence 345688555444444 3467 999999999999999999876542 333 4443321 1112 23
Q ss_pred hhhcccCCCCC-CeEEEEeCCc
Q 003896 324 LNVFQRGLCHP-KMAMVIDDRC 344 (788)
Q Consensus 324 ~rLf~~g~~d~-~~VVIIDDR~ 344 (788)
..++..-++.+ +.+|.|+|+.
T Consensus 211 ~~~~~~lgi~~~~~~i~vGD~~ 232 (282)
T 3nuq_A 211 EKAMKESGLARYENAYFIDDSG 232 (282)
T ss_dssp HHHHHHHTCCCGGGEEEEESCH
T ss_pred HHHHHHcCCCCcccEEEEcCCH
Confidence 33333222577 8999999986
No 78
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=96.32 E-value=0.012 Score=56.85 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=50.5
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|+ +.++|+ .+. .|.++|.|++.+.++..+++.++-. . +++.+++.+. +..| -+..++..
T Consensus 92 ~~~~~~---~~~~l~-~l~-g~~~~i~t~~~~~~~~~~l~~~gl~-~------~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 159 (253)
T 1qq5_A 92 LTPYPD---AAQCLA-ELA-PLKRAILSNGAPDMLQALVANAGLT-D------SFDAVISVDAKRVFKPHPDSYALVEEV 159 (253)
T ss_dssp CCBCTT---HHHHHH-HHT-TSEEEEEESSCHHHHHHHHHHTTCG-G------GCSEEEEGGGGTCCTTSHHHHHHHHHH
T ss_pred CCCCcc---HHHHHH-HHc-CCCEEEEeCcCHHHHHHHHHHCCch-h------hccEEEEccccCCCCCCHHHHHHHHHH
Confidence 356799 666676 556 8999999999999999999877532 1 2345666533 2211 23333322
Q ss_pred CCCCCCeEEEEeCCc
Q 003896 330 GLCHPKMAMVIDDRC 344 (788)
Q Consensus 330 g~~d~~~VVIIDDR~ 344 (788)
-+++++.+++|+|+.
T Consensus 160 ~~~~~~~~~~vGD~~ 174 (253)
T 1qq5_A 160 LGVTPAEVLFVSSNG 174 (253)
T ss_dssp HCCCGGGEEEEESCH
T ss_pred cCCCHHHEEEEeCCh
Confidence 125678899999985
No 79
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=96.25 E-value=0.049 Score=51.59 Aligned_cols=90 Identities=10% Similarity=0.003 Sum_probs=49.1
Q ss_pred EEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcc
Q 003896 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQ 328 (788)
Q Consensus 254 ~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~ 328 (788)
.+++.|++.++.+.|+ ..-|.++|.|++.+ ++..+++.++-. .+| +.+++.+. +..| -+..++.
T Consensus 93 ~~~~~~~~~~~l~~l~---~~g~~~~i~Tn~~~-~~~~~l~~~gl~-~~f------~~~~~~~~~~~~Kp~~~~~~~~~~ 161 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLK---SNGYKLALVSNASP-RVKTLLEKFDLK-KYF------DALALSYEIKAVKPNPKIFGFALA 161 (220)
T ss_dssp EEEECTTHHHHHHHHH---TTTCEEEECCSCHH-HHHHHHHHHTCG-GGC------SEEC-----------CCHHHHHHH
T ss_pred CceECcCHHHHHHHHH---HCCCEEEEEeCCcH-HHHHHHHhcCcH-hHe------eEEEeccccCCCCCCHHHHHHHHH
Confidence 5788899555444443 34599999999987 577887776533 123 45554432 2222 1222222
Q ss_pred cCCCCCCeEEEEeCCc--cccccCCCCCeEEe
Q 003896 329 RGLCHPKMAMVIDDRC--KVWEDKDQPRVHVV 358 (788)
Q Consensus 329 ~g~~d~~~VVIIDDR~--dVW~~~~~NlI~VV 358 (788)
.-++.+ ++|+|+. |+-..... ++.++
T Consensus 162 ~~~~~~---~~vgD~~~~Di~~a~~a-G~~~i 189 (220)
T 2zg6_A 162 KVGYPA---VHVGDIYELDYIGAKRS-YVDPI 189 (220)
T ss_dssp HHCSSE---EEEESSCCCCCCCSSSC-SEEEE
T ss_pred HcCCCe---EEEcCCchHhHHHHHHC-CCeEE
Confidence 111333 8899986 57666654 56543
No 80
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=96.21 E-value=0.032 Score=54.57 Aligned_cols=91 Identities=14% Similarity=0.104 Sum_probs=54.8
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCccc----Hhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRKS----LLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~Ks----L~rLf~~ 329 (788)
+++.|++.++.+.|+ ..-|.++|+|++.+. +..+++.+.-. . +++.+++.+. +..|. +..++..
T Consensus 105 ~~~~~~~~~~l~~l~---~~g~~~~i~tn~~~~-~~~~l~~~gl~-~------~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 173 (263)
T 3k1z_A 105 WQVLDGAEDTLRECR---TRGLRLAVISNFDRR-LEGILGGLGLR-E------HFDFVLTSEAAGWPKPDPRIFQEALRL 173 (263)
T ss_dssp EEECTTHHHHHHHHH---HTTCEEEEEESCCTT-HHHHHHHTTCG-G------GCSCEEEHHHHSSCTTSHHHHHHHHHH
T ss_pred ceECcCHHHHHHHHH---hCCCcEEEEeCCcHH-HHHHHHhCCcH-H------hhhEEEeecccCCCCCCHHHHHHHHHH
Confidence 467799655555554 345999999998874 57777766532 1 2345655532 22221 3333322
Q ss_pred CCCCCCeEEEEeCCc--cccccCCCCCeEE
Q 003896 330 GLCHPKMAMVIDDRC--KVWEDKDQPRVHV 357 (788)
Q Consensus 330 g~~d~~~VVIIDDR~--dVW~~~~~NlI~V 357 (788)
-+++++.+|+|+|+. |+-..... ++.+
T Consensus 174 ~g~~~~~~~~vGD~~~~Di~~a~~a-G~~~ 202 (263)
T 3k1z_A 174 AHMEPVVAAHVGDNYLCDYQGPRAV-GMHS 202 (263)
T ss_dssp HTCCGGGEEEEESCHHHHTHHHHTT-TCEE
T ss_pred cCCCHHHEEEECCCcHHHHHHHHHC-CCEE
Confidence 225789999999995 67766554 4443
No 81
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=96.19 E-value=0.014 Score=54.14 Aligned_cols=77 Identities=9% Similarity=-0.028 Sum_probs=48.8
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.+ .+.|+ .+ |.++|+|++.+.++..+++.++-. .+| +.+++.+. +..| -+..++..
T Consensus 73 ~~~~~~~~~-l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~~l~-~~f------~~~~~~~~~~~~Kp~~~~~~~~~~~ 140 (201)
T 2w43_A 73 LKAYEDTKY-LKEIS---EI-AEVYALSNGSINEVKQHLERNGLL-RYF------KGIFSAESVKEYKPSPKVYKYFLDS 140 (201)
T ss_dssp CEECGGGGG-HHHHH---HH-SEEEEEESSCHHHHHHHHHHTTCG-GGC------SEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred cccCCChHH-HHHHH---hC-CeEEEEeCcCHHHHHHHHHHCCcH-HhC------cEEEehhhcCCCCCCHHHHHHHHHh
Confidence 456799766 66665 34 999999999999999999877543 123 45555532 2222 12333322
Q ss_pred CCCCCCeEEEEeCCcc
Q 003896 330 GLCHPKMAMVIDDRCK 345 (788)
Q Consensus 330 g~~d~~~VVIIDDR~d 345 (788)
-+ ++.+++|+|+..
T Consensus 141 ~~--~~~~~~vGD~~~ 154 (201)
T 2w43_A 141 IG--AKEAFLVSSNAF 154 (201)
T ss_dssp HT--CSCCEEEESCHH
T ss_pred cC--CCcEEEEeCCHH
Confidence 11 567888888864
No 82
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.19 E-value=0.011 Score=62.91 Aligned_cols=86 Identities=16% Similarity=0.116 Sum_probs=51.3
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCcccccc-ccCceEe-ecCC---Cc----ccHhhh
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ-LLDRVVC-VKSG---SR----KSLLNV 326 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~-l~~RIis-resg---~~----KsL~rL 326 (788)
+++|++.++.+.|+ ..-|.++|.|++.+.++..+++.++-+ .+|.... +.+-+++ ...+ .. .-+..+
T Consensus 256 ~~~pg~~e~l~~Lk---~~G~~~~ivS~~~~~~~~~~~~~lgl~-~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~ 331 (415)
T 3p96_A 256 ELMPGARTTLRTLR---RLGYACGVVSGGFRRIIEPLAEELMLD-YVAANELEIVDGTLTGRVVGPIIDRAGKATALREF 331 (415)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHTTCS-EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHcCcc-ceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence 67899666666564 355999999999999999999988764 3444211 0111111 1111 11 123333
Q ss_pred cccCCCCCCeEEEEeCCcc
Q 003896 327 FQRGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 327 f~~g~~d~~~VVIIDDR~d 345 (788)
....+..++.++.|+|+..
T Consensus 332 ~~~~gi~~~~~i~vGD~~~ 350 (415)
T 3p96_A 332 AQRAGVPMAQTVAVGDGAN 350 (415)
T ss_dssp HHHHTCCGGGEEEEECSGG
T ss_pred HHHcCcChhhEEEEECCHH
Confidence 3322256788999999863
No 83
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=96.18 E-value=0.011 Score=56.28 Aligned_cols=81 Identities=16% Similarity=0.077 Sum_probs=49.2
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
++.|++.++.+.|+ ..-|.++|+|++.+.++..+++. +- ..+|.. +.+++.+. +..| -+..++..-
T Consensus 109 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~-~l-~~~f~~----d~i~~~~~~~~~kp~~~~~~~~~~~l 179 (243)
T 3qxg_A 109 ERMPGAWELLQKVK---SEGLTPMVVTGSGQLSLLERLEH-NF-PGMFHK----ELMVTAFDVKYGKPNPEPYLMALKKG 179 (243)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEECCCCCHHHHTTHHH-HS-TTTCCG----GGEECTTTCSSCTTSSHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHH---HcCCcEEEEeCCcHHHHHHHHHH-hH-HHhcCc----ceEEeHHhCCCCCCChHHHHHHHHHc
Confidence 45699666555554 34599999999999998888765 22 233410 34444432 1111 233333332
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+++++.+|.|+|+..
T Consensus 180 g~~~~~~i~vGD~~~ 194 (243)
T 3qxg_A 180 GLKADEAVVIENAPL 194 (243)
T ss_dssp TCCGGGEEEEECSHH
T ss_pred CCCHHHeEEEeCCHH
Confidence 357889999999873
No 84
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=96.15 E-value=0.0053 Score=58.25 Aligned_cols=77 Identities=16% Similarity=0.119 Sum_probs=48.4
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++.+.| .+.|.++|+|++.+.++..+++.++-. | +.+++.+. +..| -+..++..
T Consensus 119 ~~~~~~~~~~l~~l----~~~~~~~i~s~~~~~~~~~~l~~~g~~---f------~~~~~~~~~~~~kp~~~~~~~~~~~ 185 (254)
T 3umc_A 119 LRPWPDTLAGMHAL----KADYWLAALSNGNTALMLDVARHAGLP---W------DMLLCADLFGHYKPDPQVYLGACRL 185 (254)
T ss_dssp CEECTTHHHHHHHH----TTTSEEEECCSSCHHHHHHHHHHHTCC---C------SEECCHHHHTCCTTSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHH----HhcCeEEEEeCCCHHHHHHHHHHcCCC---c------ceEEeecccccCCCCHHHHHHHHHH
Confidence 35679955544444 445999999999999999999987543 3 34444422 1111 23333322
Q ss_pred CCCCCCeEEEEeCCc
Q 003896 330 GLCHPKMAMVIDDRC 344 (788)
Q Consensus 330 g~~d~~~VVIIDDR~ 344 (788)
-+++++.++.|+|+.
T Consensus 186 lgi~~~~~~~iGD~~ 200 (254)
T 3umc_A 186 LDLPPQEVMLCAAHN 200 (254)
T ss_dssp HTCCGGGEEEEESCH
T ss_pred cCCChHHEEEEcCch
Confidence 225788899999985
No 85
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=96.06 E-value=0.023 Score=51.21 Aligned_cols=79 Identities=14% Similarity=0.157 Sum_probs=49.0
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
.++|++.++.++|+ ..-+.++|+|++.+.+.. +++.++-. .+| +.+++.+. +..| -+..+...-
T Consensus 85 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~-~~~~~~~~-~~f------~~~~~~~~~~~~Kp~~~~~~~~~~~~ 153 (207)
T 2go7_A 85 VLMPGAREVLAWAD---ESGIQQFIYTHKGNNAFT-ILKDLGVE-SYF------TEILTSQSGFVRKPSPEAATYLLDKY 153 (207)
T ss_dssp EECTTHHHHHHHHH---HTTCEEEEECSSCTHHHH-HHHHHTCG-GGE------EEEECGGGCCCCTTSSHHHHHHHHHH
T ss_pred eeCcCHHHHHHHHH---HCCCeEEEEeCCchHHHH-HHHHcCch-hhe------eeEEecCcCCCCCCCcHHHHHHHHHh
Confidence 46799666666665 345899999999999999 88876433 123 34444432 2222 233333221
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+++++.++.|+|+..
T Consensus 154 ~i~~~~~~~iGD~~n 168 (207)
T 2go7_A 154 QLNSDNTYYIGDRTL 168 (207)
T ss_dssp TCCGGGEEEEESSHH
T ss_pred CCCcccEEEECCCHH
Confidence 257788999999854
No 86
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=96.00 E-value=0.0099 Score=55.89 Aligned_cols=77 Identities=10% Similarity=-0.019 Sum_probs=48.8
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCc----ccHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSR----KSLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~----KsL~rLf~~g 330 (788)
++.|++.++.+.|+ +.|.++|+|++.+.++..+++.+.-. |. .+++.+. +.. .-+..++..-
T Consensus 116 ~~~~~~~~~l~~l~----~~~~~~i~t~~~~~~~~~~l~~~~~~---f~------~~~~~~~~~~~kp~~~~~~~~~~~l 182 (254)
T 3umg_A 116 TPWPDSVPGLTAIK----AEYIIGPLSNGNTSLLLDMAKNAGIP---WD------VIIGSDINRKYKPDPQAYLRTAQVL 182 (254)
T ss_dssp CBCTTHHHHHHHHH----HHSEEEECSSSCHHHHHHHHHHHTCC---CS------CCCCHHHHTCCTTSHHHHHHHHHHT
T ss_pred cCCcCHHHHHHHHH----hCCeEEEEeCCCHHHHHHHHHhCCCC---ee------EEEEcCcCCCCCCCHHHHHHHHHHc
Confidence 45688555555554 34999999999999999999987543 33 3333321 111 1233333322
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+++++.++.|+|+..
T Consensus 183 gi~~~~~~~iGD~~~ 197 (254)
T 3umg_A 183 GLHPGEVMLAAAHNG 197 (254)
T ss_dssp TCCGGGEEEEESCHH
T ss_pred CCChHHEEEEeCChH
Confidence 357889999999853
No 87
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=95.97 E-value=0.029 Score=53.67 Aligned_cols=80 Identities=18% Similarity=0.075 Sum_probs=46.1
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHH-hhCCCCCccccccccCceEeec--C-CCcc----cHhhhc
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWR-LLDPEGHLIGSKQLLDRVVCVK--S-GSRK----SLLNVF 327 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~Ilr-LLDPdgklF~~r~l~~RIisre--s-g~~K----sL~rLf 327 (788)
++.|++.++.+.|+ ..-|.++|+|++.+.++...+. .++- ..+++.+++.+ . +..| -+..++
T Consensus 112 ~~~~~~~~~l~~l~---~~g~~~~i~sn~~~~~~~~~l~~~~~l-------~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~ 181 (250)
T 3l5k_A 112 ALMPGAEKLIIHLR---KHGIPFALATSSRSASFDMKTSRHKEF-------FSLFSHIVLGDDPEVQHGKPDPDIFLACA 181 (250)
T ss_dssp CBCTTHHHHHHHHH---HTTCCEEEECSCCHHHHHHHTTTCHHH-------HTTSSCEECTTCTTCCSCTTSTHHHHHHH
T ss_pred CCCCCHHHHHHHHH---hCCCcEEEEeCCCHHHHHHHHHhccCH-------HhheeeEEecchhhccCCCCChHHHHHHH
Confidence 46699666555554 3459999999999887766542 1110 11223444444 2 1122 244444
Q ss_pred ccCCCCC--CeEEEEeCCcc
Q 003896 328 QRGLCHP--KMAMVIDDRCK 345 (788)
Q Consensus 328 ~~g~~d~--~~VVIIDDR~d 345 (788)
..-++.+ +.++.|+|+..
T Consensus 182 ~~lgi~~~~~~~i~iGD~~~ 201 (250)
T 3l5k_A 182 KRFSPPPAMEKCLVFEDAPN 201 (250)
T ss_dssp HTSSSCCCGGGEEEEESSHH
T ss_pred HHcCCCCCcceEEEEeCCHH
Confidence 3333456 89999999863
No 88
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=95.89 E-value=0.038 Score=53.81 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=46.6
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc--------cHhhhc
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK--------SLLNVF 327 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K--------sL~rLf 327 (788)
+.|++.++.+.|+ ...+-+.|.|++.+ +..+++.++-. .+++.|++.++ +..| -++++.
T Consensus 96 ~~pg~~~ll~~L~---~~g~~i~i~t~~~~--~~~~l~~~gl~-------~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg 163 (243)
T 4g9b_A 96 VLPGIRSLLADLR---AQQISVGLASVSLN--APTILAALELR-------EFFTFCADASQLKNSKPDPEIFLAACAGLG 163 (243)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEECCCCTT--HHHHHHHTTCG-------GGCSEECCGGGCSSCTTSTHHHHHHHHHHT
T ss_pred ccccHHHHHHhhh---cccccceecccccc--hhhhhhhhhhc-------cccccccccccccCCCCcHHHHHHHHHHcC
Confidence 4699877777776 46788888887654 66777766533 23356666543 2222 344332
Q ss_pred ccCCCCCCeEEEEeCCc
Q 003896 328 QRGLCHPKMAMVIDDRC 344 (788)
Q Consensus 328 ~~g~~d~~~VVIIDDR~ 344 (788)
+.++.+|+|+|+.
T Consensus 164 ----~~p~e~l~VgDs~ 176 (243)
T 4g9b_A 164 ----VPPQACIGIEDAQ 176 (243)
T ss_dssp ----SCGGGEEEEESSH
T ss_pred ----CChHHEEEEcCCH
Confidence 5789999999985
No 89
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=95.70 E-value=0.13 Score=49.71 Aligned_cols=41 Identities=22% Similarity=0.093 Sum_probs=34.1
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPd 299 (788)
+++|+..++.+.|+ ..-+.+.|+|++.+.++..+++.+.-.
T Consensus 144 ~~~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~gl~ 184 (280)
T 3skx_A 144 RIRPESREAISKLK---AIGIKCMMLTGDNRFVAKWVAEELGLD 184 (280)
T ss_dssp EECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred CCCHhHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCCh
Confidence 79999777777775 346899999999999999999987653
No 90
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=95.43 E-value=0.058 Score=48.78 Aligned_cols=67 Identities=18% Similarity=0.127 Sum_probs=51.7
Q ss_pred CChHHHHHHHHHhC------CCCceEEEEeeeCCCceEEEEEEECC-----eEeEEEecCCHHHHHHHHHHHHHHHHHHh
Q 003896 625 YLSIGVLQEIGKRC------SSKVEFRSVVSTSKDLQFSVEVLFTG-----EKIGVGMGKTRKDAQQQAAENALHYLAEK 693 (788)
Q Consensus 625 ~dyKS~LQE~~QK~------~~~peYelveesGH~~~FtveV~I~G-----kk~G~G~GsSKKEAEQ~AAK~AL~~L~~~ 693 (788)
.+.+++|+.||++. ...|.|.+.........| ++|.+-. ...|.-+ .|||.||+.||-+|++.|.+.
T Consensus 4 ~sAi~lL~~yC~~Lp~d~~~~~~P~~~~~~~~~~~~~~-c~v~LP~~splr~i~g~~~-~sk~~AK~sAAf~Ac~~L~~~ 81 (102)
T 2kou_A 4 GSSISMMYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTI-CRITLPANAPISEIESSLL-PSTEAAKKDACLKAVHELHNL 81 (102)
T ss_dssp SHHHHHHHHHHTTSSSCTTCCSSCEEEEEECCGGGCEE-EEEECCTTCSSCCEEEEEE-SSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCccceEEEeEeecCCCeE-EEEECCCCCCCCeeeCCcc-ccHHHHHHHHHHHHHHHHHHC
Confidence 36789999999996 256999975443334567 8888854 4566666 999999999999999999753
No 91
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=95.37 E-value=0.043 Score=49.90 Aligned_cols=74 Identities=8% Similarity=-0.088 Sum_probs=44.6
Q ss_pred cCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeE
Q 003896 258 RPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMA 337 (788)
Q Consensus 258 RPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~V 337 (788)
.|...++.+.|+ ..-+.++|.|++.+.++..+++.++-+ .+|.. .+. ...-+..++...+.+++.+
T Consensus 38 ~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~~~~---------~kp-~~~~~~~~~~~~~~~~~~~ 103 (162)
T 2p9j_A 38 NVLDGIGIKLLQ---KMGITLAVISGRDSAPLITRLKELGVE-EIYTG---------SYK-KLEIYEKIKEKYSLKDEEI 103 (162)
T ss_dssp EHHHHHHHHHHH---TTTCEEEEEESCCCHHHHHHHHHTTCC-EEEEC---------C---CHHHHHHHHHHTTCCGGGE
T ss_pred cccHHHHHHHHH---HCCCEEEEEeCCCcHHHHHHHHHcCCH-hhccC---------CCC-CHHHHHHHHHHcCCCHHHE
Confidence 455344555554 356999999999999999999987654 23431 111 1111222322212467788
Q ss_pred EEEeCCcc
Q 003896 338 MVIDDRCK 345 (788)
Q Consensus 338 VIIDDR~d 345 (788)
+.|+|+..
T Consensus 104 ~~vGD~~~ 111 (162)
T 2p9j_A 104 GFIGDDVV 111 (162)
T ss_dssp EEEECSGG
T ss_pred EEECCCHH
Confidence 88888763
No 92
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=95.02 E-value=0.055 Score=53.40 Aligned_cols=80 Identities=16% Similarity=0.048 Sum_probs=49.5
Q ss_pred EEecCChHHHHHHHHHhccc-cEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcc
Q 003896 255 VRLRPAWEDLRSYLIAKGRK-RFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQ 328 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk-~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~ 328 (788)
+.+.|++.++.+.|+ .. .+.+.|+|++.+.++..+++.++-. .| +.++|.++ +..| -+..+..
T Consensus 113 ~~~~~g~~~~L~~l~---~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f------~~i~~~~~~~~~kp~~~~~~~~~~ 181 (275)
T 2qlt_A 113 SIEVPGAVKLCNALN---ALPKEKWAVATSGTRDMAKKWFDILKIK--RP------EYFITANDVKQGKPHPEPYLKGRN 181 (275)
T ss_dssp CEECTTHHHHHHHHH---TSCGGGEEEECSSCHHHHHHHHHHHTCC--CC------SSEECGGGCSSCTTSSHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---hccCCeEEEEeCCCHHHHHHHHHHcCCC--cc------CEEEEcccCCCCCCChHHHHHHHH
Confidence 346799655555554 23 5889999999999999999887543 13 33444432 1111 2333332
Q ss_pred cCCC-------CCCeEEEEeCCcc
Q 003896 329 RGLC-------HPKMAMVIDDRCK 345 (788)
Q Consensus 329 ~g~~-------d~~~VVIIDDR~d 345 (788)
.-+. +++.++.|+|+..
T Consensus 182 ~lgi~~~~~~~~~~~~i~~GDs~n 205 (275)
T 2qlt_A 182 GLGFPINEQDPSKSKVVVFEDAPA 205 (275)
T ss_dssp HTTCCCCSSCGGGSCEEEEESSHH
T ss_pred HcCCCccccCCCcceEEEEeCCHH
Confidence 2224 6788999999864
No 93
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=95.00 E-value=0.062 Score=52.41 Aligned_cols=73 Identities=15% Similarity=0.177 Sum_probs=44.5
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc--------cHhhhc
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK--------SLLNVF 327 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K--------sL~rLf 327 (788)
+.|++.++.++|+ ...+-+.+.|+ +..+..+++.++-. .+| +.|++.++ +..| -++++
T Consensus 117 ~~p~~~~ll~~Lk---~~g~~i~i~~~--~~~~~~~L~~~gl~-~~F------d~i~~~~~~~~~KP~p~~~~~a~~~l- 183 (250)
T 4gib_A 117 ILPGIESLLIDVK---SNNIKIGLSSA--SKNAINVLNHLGIS-DKF------DFIADAGKCKNNKPHPEIFLMSAKGL- 183 (250)
T ss_dssp SCTTHHHHHHHHH---HTTCEEEECCS--CTTHHHHHHHHTCG-GGC------SEECCGGGCCSCTTSSHHHHHHHHHH-
T ss_pred cchhHHHHHHHHH---hcccccccccc--cchhhhHhhhcccc-ccc------ceeecccccCCCCCcHHHHHHHHHHh-
Confidence 4599778778786 34555555444 45677777776543 233 45665543 2222 24433
Q ss_pred ccCCCCCCeEEEEeCCcc
Q 003896 328 QRGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 328 ~~g~~d~~~VVIIDDR~d 345 (788)
++.++.+|+|+|+..
T Consensus 184 ---g~~p~e~l~VGDs~~ 198 (250)
T 4gib_A 184 ---NVNPQNCIGIEDASA 198 (250)
T ss_dssp ---TCCGGGEEEEESSHH
T ss_pred ---CCChHHeEEECCCHH
Confidence 257899999999864
No 94
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=94.89 E-value=0.075 Score=48.19 Aligned_cols=76 Identities=20% Similarity=0.146 Sum_probs=43.0
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CC----cccHhhhcccCC
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GS----RKSLLNVFQRGL 331 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~----~KsL~rLf~~g~ 331 (788)
+.|+..++.++|+ ..-+.++|+|++. .++..+++.+.-. .+| +.+++.++ +. ..-+..+...-+
T Consensus 83 ~~~~~~~~l~~l~---~~g~~~~i~t~~~-~~~~~~l~~~~~~-~~f------~~~~~~~~~~~~kp~~~~~~~~~~~~~ 151 (190)
T 2fi1_A 83 LFEGVSDLLEDIS---NQGGRHFLVSHRN-DQVLEILEKTSIA-AYF------TEVVTSSSGFKRKPNPESMLYLREKYQ 151 (190)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEECSSC-THHHHHHHHTTCG-GGE------EEEECGGGCCCCTTSCHHHHHHHHHTT
T ss_pred cCcCHHHHHHHHH---HCCCcEEEEECCc-HHHHHHHHHcCCH-hhe------eeeeeccccCCCCCCHHHHHHHHHHcC
Confidence 5699555555554 3459999999876 4777777765432 223 34444322 11 122333333222
Q ss_pred CCCCeEEEEeCCcc
Q 003896 332 CHPKMAMVIDDRCK 345 (788)
Q Consensus 332 ~d~~~VVIIDDR~d 345 (788)
++ .++.|+|+..
T Consensus 152 ~~--~~~~iGD~~~ 163 (190)
T 2fi1_A 152 IS--SGLVIGDRPI 163 (190)
T ss_dssp CS--SEEEEESSHH
T ss_pred CC--eEEEEcCCHH
Confidence 34 7888888753
No 95
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=94.87 E-value=0.015 Score=54.37 Aligned_cols=82 Identities=22% Similarity=0.318 Sum_probs=46.8
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++.+.| .+.|.++|+|++.+. ++.+ +-..+++.+++.+. +..| -+..++..
T Consensus 104 ~~~~~~~~~~l~~l----~~~~~~~i~t~~~~~-----l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (230)
T 3vay_A 104 VQIFPEVQPTLEIL----AKTFTLGVITNGNAD-----VRRL-------GLADYFAFALCAEDLGIGKPDPAPFLEALRR 167 (230)
T ss_dssp CCBCTTHHHHHHHH----HTTSEEEEEESSCCC-----GGGS-------TTGGGCSEEEEHHHHTCCTTSHHHHHHHHHH
T ss_pred CccCcCHHHHHHHH----HhCCeEEEEECCchh-----hhhc-------CcHHHeeeeEEccccCCCCcCHHHHHHHHHH
Confidence 34668955544444 444999999999876 2222 11223456666532 2223 23333332
Q ss_pred CCCCCCeEEEEeCCc--cccccCCC
Q 003896 330 GLCHPKMAMVIDDRC--KVWEDKDQ 352 (788)
Q Consensus 330 g~~d~~~VVIIDDR~--dVW~~~~~ 352 (788)
-+++++.++.|+|+. |+-.....
T Consensus 168 ~~~~~~~~~~vGD~~~~Di~~a~~a 192 (230)
T 3vay_A 168 AKVDASAAVHVGDHPSDDIAGAQQA 192 (230)
T ss_dssp HTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred hCCCchheEEEeCChHHHHHHHHHC
Confidence 225789999999985 67655543
No 96
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=94.81 E-value=0.049 Score=54.87 Aligned_cols=35 Identities=3% Similarity=0.142 Sum_probs=29.5
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhh
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLL 296 (788)
+++.|+ +.++|+ + .|-++|+|++.+..+..+++.+
T Consensus 124 ~~~~pg---v~e~L~-~---g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 124 APVYAD---AIDFIK-R---KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp BCCCHH---HHHHHH-H---CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCC---HHHHHH-c---CCEEEEEeCCCHHHHHHHHHhh
Confidence 345677 889997 4 7899999999999999998866
No 97
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=94.80 E-value=0.02 Score=53.85 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=28.6
Q ss_pred EecCChHHHHHHHHHhccc-cEEEEEEeCCchHHHHHHHHhhC
Q 003896 256 RLRPAWEDLRSYLIAKGRK-RFEVYVCTMAERDYALEMWRLLD 297 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk-~FElyVyTmgtR~YA~~IlrLLD 297 (788)
++.|+..++.+.|+ .. .|.++|.|++.+.++..+++.++
T Consensus 73 ~~~~g~~e~L~~L~---~~~g~~~~ivT~~~~~~~~~~l~~~g 112 (193)
T 2i7d_A 73 EPIPGALDAVREMN---DLPDTQVFICTSPLLKYHHCVGEKYR 112 (193)
T ss_dssp CBCTTHHHHHHHHH---TSTTEEEEEEECCCSSCTTTHHHHHH
T ss_pred ccCcCHHHHHHHHH---hCCCCeEEEEeCCChhhHHHHHHHhC
Confidence 46699544444443 23 59999999999999988888654
No 98
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=94.80 E-value=0.074 Score=48.61 Aligned_cols=41 Identities=12% Similarity=-0.048 Sum_probs=31.8
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPd 299 (788)
++.|+..++.++|+ ..-+.+.|+|.+...++..+++.++-+
T Consensus 76 ~l~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~~~~ 116 (211)
T 1l7m_A 76 TPTEGAEETIKELK---NRGYVVAVVSGGFDIAVNKIKEKLGLD 116 (211)
T ss_dssp CBCTTHHHHHHHHH---HTTEEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred CCCccHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHcCCC
Confidence 35688666666665 356999999999999999888877654
No 99
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=94.78 E-value=0.029 Score=54.00 Aligned_cols=39 Identities=15% Similarity=-0.007 Sum_probs=29.1
Q ss_pred cCChHHHHHHHHHhccccEEEEEEeCCc---------------hHHHHHHHHhhCCC
Q 003896 258 RPAWEDLRSYLIAKGRKRFEVYVCTMAE---------------RDYALEMWRLLDPE 299 (788)
Q Consensus 258 RPgweeLreFL~ak~sk~FElyVyTmgt---------------R~YA~~IlrLLDPd 299 (788)
.|++.++.+.|+ .+-|.++|.|++. ..++..+++.++-.
T Consensus 52 ~pg~~e~L~~L~---~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 52 IDGVIDAMRELK---KMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp CTTHHHHHHHHH---HTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHH---HCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 488555555554 3569999999999 58888888876543
No 100
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=94.77 E-value=0.057 Score=50.07 Aligned_cols=27 Identities=19% Similarity=0.432 Sum_probs=19.3
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAE 285 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgt 285 (788)
+++.||+.++.+.|+ +.|.+.|.|++.
T Consensus 68 ~~~~pg~~e~L~~L~----~~~~~~i~T~~~ 94 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLN----EHYDIYIATAAM 94 (180)
T ss_dssp CCBCTTHHHHHHHHT----TTSEEEEEECC-
T ss_pred CCCCcCHHHHHHHHH----hcCCEEEEeCCC
Confidence 467799666555554 349999999983
No 101
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=94.68 E-value=0.025 Score=57.63 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=24.7
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCc---hHHHHHHHHhhC
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAE---RDYALEMWRLLD 297 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgt---R~YA~~IlrLLD 297 (788)
+-|+..++++.|+ .+-+.|.|.|+.. +......++.+.
T Consensus 102 ~~pg~~e~L~~L~---~~Gi~i~iaTnr~~~~~~~~~~~L~~~G 142 (258)
T 2i33_A 102 ALPGSIDFLKYTE---SKGVDIYYISNRKTNQLDATIKNLERVG 142 (258)
T ss_dssp ECTTHHHHHHHHH---HTTCEEEEEEEEEGGGHHHHHHHHHHHT
T ss_pred cCccHHHHHHHHH---HCCCEEEEEcCCchhHHHHHHHHHHHcC
Confidence 4489555555554 4569999999998 444445555443
No 102
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=94.34 E-value=0.026 Score=58.79 Aligned_cols=79 Identities=18% Similarity=0.123 Sum_probs=42.4
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCC------chHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cH
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMA------ERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SL 323 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmg------tR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL 323 (788)
+++.|+..++++.|+ .+-|.+.|.|++ .+......+.-|+. +| +.|++.++ +..| -+
T Consensus 99 ~~~~~~~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~---~f------d~i~~~~~~~~~KP~p~~~ 166 (555)
T 3i28_A 99 RKINRPMLQAALMLR---KKGFTTAILTNTWLDDRAERDGLAQLMCELKM---HF------DFLIESCQVGMVKPEPQIY 166 (555)
T ss_dssp CEECHHHHHHHHHHH---HTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT---TS------SEEEEHHHHTCCTTCHHHH
T ss_pred cCcChhHHHHHHHHH---HCCCEEEEEeCCCccccchhhHHHHHhhhhhh---he------eEEEeccccCCCCCCHHHH
Confidence 356788444444443 345999999999 55444444322221 33 45666532 3222 12
Q ss_pred hhhcccCCCCCCeEEEEeCCcc
Q 003896 324 LNVFQRGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 324 ~rLf~~g~~d~~~VVIIDDR~d 345 (788)
..++..-+++++.+++|||+..
T Consensus 167 ~~~~~~lg~~p~~~~~v~D~~~ 188 (555)
T 3i28_A 167 KFLLDTLKASPSEVVFLDDIGA 188 (555)
T ss_dssp HHHHHHHTCCGGGEEEEESCHH
T ss_pred HHHHHHcCCChhHEEEECCcHH
Confidence 2222211247888888899853
No 103
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=93.87 E-value=0.15 Score=48.03 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=31.9
Q ss_pred EEecCChHHHHHHHHHhccc-cEEEEEEeCCchHHHHHHHHhhCCCCCccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRK-RFEVYVCTMAERDYALEMWRLLDPEGHLIG 304 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk-~FElyVyTmgtR~YA~~IlrLLDPdgklF~ 304 (788)
+++.||..++.+.|+ .+ .|.+.|.|++.+.++..+++.++-..++|.
T Consensus 74 ~~~~~g~~e~L~~L~---~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~ 121 (197)
T 1q92_A 74 LEPLPGAVEAVKEMA---SLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG 121 (197)
T ss_dssp CCBCTTHHHHHHHHH---HSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC
T ss_pred CCcCcCHHHHHHHHH---hcCCCeEEEEeCCccchHHHHHHHhchHHHhch
Confidence 356699666656554 34 699999999999988877765433223443
No 104
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=93.87 E-value=0.12 Score=53.66 Aligned_cols=74 Identities=15% Similarity=0.220 Sum_probs=39.5
Q ss_pred cCChHHHHHHHHHhccccEEEEEEeCCch----HHHHHHHHhhCCCCCccccccccCceEeecCCCccc--HhhhcccCC
Q 003896 258 RPAWEDLRSYLIAKGRKRFEVYVCTMAER----DYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKS--LLNVFQRGL 331 (788)
Q Consensus 258 RPgweeLreFL~ak~sk~FElyVyTmgtR----~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~Ks--L~rLf~~g~ 331 (788)
-|+..++.++|. ..-+.|+|.|+-.. .....-++.+.-.. ++. ++++.+.+..-|. +..|...|
T Consensus 103 ~pG~~ell~~L~---~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~-----~~Lilr~~~~~K~~~r~~l~~~G- 172 (262)
T 3ocu_A 103 VPGAVEFNNYVN---SHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG-VEE-----SAFYLKKDKSAKAARFAEIEKQG- 172 (262)
T ss_dssp CTTHHHHHHHHH---HTTEEEEEEEEEETTTTHHHHHHHHHHHTCSC-CSG-----GGEEEESSCSCCHHHHHHHHHTT-
T ss_pred CccHHHHHHHHH---HCCCeEEEEeCCCccchHHHHHHHHHHcCcCc-ccc-----cceeccCCCCChHHHHHHHHhcC-
Confidence 389555555554 56799999998755 45555555553221 011 1455443333232 33333221
Q ss_pred CCCCeEEEEeCC
Q 003896 332 CHPKMAMVIDDR 343 (788)
Q Consensus 332 ~d~~~VVIIDDR 343 (788)
-..++.|.|.
T Consensus 173 --y~iv~~vGD~ 182 (262)
T 3ocu_A 173 --YEIVLYVGDN 182 (262)
T ss_dssp --EEEEEEEESS
T ss_pred --CCEEEEECCC
Confidence 3568888776
No 105
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=93.77 E-value=0.12 Score=48.47 Aligned_cols=69 Identities=9% Similarity=-0.025 Sum_probs=42.5
Q ss_pred HHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEeC
Q 003896 263 DLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDD 342 (788)
Q Consensus 263 eLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIIDD 342 (788)
++.+.|+ .+-+.++|+|+..+.++..+++.++-+. +|.. .+. ...-+..+....+.+++.++.|+|
T Consensus 42 ~~l~~L~---~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-~~~~---------~k~-k~~~~~~~~~~~~~~~~~~~~vGD 107 (180)
T 1k1e_A 42 LGIKMLM---DADIQVAVLSGRDSPILRRRIADLGIKL-FFLG---------KLE-KETACFDLMKQAGVTAEQTAYIGD 107 (180)
T ss_dssp HHHHHHH---HTTCEEEEEESCCCHHHHHHHHHHTCCE-EEES---------CSC-HHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred HHHHHHH---HCCCeEEEEeCCCcHHHHHHHHHcCCce-eecC---------CCC-cHHHHHHHHHHcCCCHHHEEEECC
Confidence 4566665 4668999999999999999999886552 3321 010 111222232211135678888888
Q ss_pred Ccc
Q 003896 343 RCK 345 (788)
Q Consensus 343 R~d 345 (788)
+..
T Consensus 108 ~~~ 110 (180)
T 1k1e_A 108 DSV 110 (180)
T ss_dssp SGG
T ss_pred CHH
Confidence 763
No 106
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=93.36 E-value=0.058 Score=50.76 Aligned_cols=67 Identities=7% Similarity=0.042 Sum_probs=43.7
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEeCC
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDR 343 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIIDDR 343 (788)
+.+.|+ ..-+.+.|.|++.+.++..+++.+.-+ +|... + ....-|..+....+.+++.++.|.|+
T Consensus 47 ~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~~~---------~-~k~~~l~~~~~~~~~~~~~~~~vGD~ 111 (176)
T 3mmz_A 47 GIAALR---KSGLTMLILSTEQNPVVAARARKLKIP--VLHGI---------D-RKDLALKQWCEEQGIAPERVLYVGND 111 (176)
T ss_dssp HHHHHH---HTTCEEEEEESSCCHHHHHHHHHHTCC--EEESC---------S-CHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHH---HCCCeEEEEECcChHHHHHHHHHcCCe--eEeCC---------C-ChHHHHHHHHHHcCCCHHHEEEEcCC
Confidence 566776 466999999999999999999988766 55521 1 11112333332212467778888887
Q ss_pred cc
Q 003896 344 CK 345 (788)
Q Consensus 344 ~d 345 (788)
..
T Consensus 112 ~n 113 (176)
T 3mmz_A 112 VN 113 (176)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 107
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=92.73 E-value=0.27 Score=51.01 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=40.0
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCch----HHHHHHHHhhCCCCCccccccccCceEeecCCCccc--HhhhcccC
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAER----DYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKS--LLNVFQRG 330 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR----~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~Ks--L~rLf~~g 330 (788)
+-|+..++..+|+ ..-+.|+|.|+-.. .-...-++.+.-.. ++. ..++.+.+...|. +..|...
T Consensus 102 ~~pg~~ell~~L~---~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~-----~~Lilr~~~~~K~~~r~~L~~~- 171 (260)
T 3pct_A 102 AIPGAVEFSNYVN---ANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTG-VND-----KTLLLKKDKSNKSVRFKQVEDM- 171 (260)
T ss_dssp ECTTHHHHHHHHH---HTTCEEEEEEEEETTTSHHHHHHHHHHHTCCC-CST-----TTEEEESSCSSSHHHHHHHHTT-
T ss_pred CCccHHHHHHHHH---HCCCeEEEEeCCCccccHHHHHHHHHHcCcCc-ccc-----ceeEecCCCCChHHHHHHHHhc-
Confidence 3489555555554 46799999998754 45555555554321 011 1344343222232 3333331
Q ss_pred CCCCCeEEEEeCC
Q 003896 331 LCHPKMAMVIDDR 343 (788)
Q Consensus 331 ~~d~~~VVIIDDR 343 (788)
..+.++.|.|.
T Consensus 172 --gy~iv~~iGD~ 182 (260)
T 3pct_A 172 --GYDIVLFVGDN 182 (260)
T ss_dssp --TCEEEEEEESS
T ss_pred --CCCEEEEECCC
Confidence 24678888876
No 108
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=92.70 E-value=0.12 Score=53.10 Aligned_cols=86 Identities=13% Similarity=0.062 Sum_probs=51.2
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCcccccc-ccCceEee----cCCC----cccHhhh
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQ-LLDRVVCV----KSGS----RKSLLNV 326 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~-l~~RIisr----esg~----~KsL~rL 326 (788)
+++|+..++.+.|+ ..-|.+.|.|++.+.++..+++.++-+ .+|.... +.+..++- +.+. ..-+..+
T Consensus 178 ~~~pg~~~~l~~L~---~~g~~~~ivS~~~~~~~~~~~~~lgl~-~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~ 253 (335)
T 3n28_A 178 PLMPELPELVATLH---AFGWKVAIASGGFTYFSDYLKEQLSLD-YAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL 253 (335)
T ss_dssp CCCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHTCS-EEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHH---HCCCEEEEEeCCcHHHHHHHHHHcCCC-eEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence 57899666666665 356999999999999999999987764 2444210 00111110 0111 1123333
Q ss_pred cccCCCCCCeEEEEeCCcc
Q 003896 327 FQRGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 327 f~~g~~d~~~VVIIDDR~d 345 (788)
....+.+++.++.|+|+..
T Consensus 254 ~~~lgi~~~~~v~vGDs~n 272 (335)
T 3n28_A 254 AQQYDVEIHNTVAVGDGAN 272 (335)
T ss_dssp HHHHTCCGGGEEEEECSGG
T ss_pred HHHcCCChhhEEEEeCCHH
Confidence 3222246788999999853
No 109
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=92.67 E-value=0.15 Score=48.48 Aligned_cols=68 Identities=10% Similarity=-0.052 Sum_probs=42.8
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEeCC
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDR 343 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIIDDR 343 (788)
+.+.|+ ..-+.+.|.|++.+.++..+++.+.-+. +|.. + . +...-+..+....+.+++.++.|.|+
T Consensus 54 ~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~lgl~~-~f~~------~---~-~K~~~~~~~~~~~g~~~~~~~~vGD~ 119 (189)
T 3mn1_A 54 GIKMLI---ASGVTTAIISGRKTAIVERRAKSLGIEH-LFQG------R---E-DKLVVLDKLLAELQLGYEQVAYLGDD 119 (189)
T ss_dssp HHHHHH---HTTCEEEEECSSCCHHHHHHHHHHTCSE-EECS------C---S-CHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHH---HCCCEEEEEECcChHHHHHHHHHcCCHH-HhcC------c---C-ChHHHHHHHHHHcCCChhHEEEECCC
Confidence 566776 4568999999999999999999886542 3331 1 1 11112222222112467788888887
Q ss_pred cc
Q 003896 344 CK 345 (788)
Q Consensus 344 ~d 345 (788)
..
T Consensus 120 ~n 121 (189)
T 3mn1_A 120 LP 121 (189)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 110
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=92.44 E-value=0.068 Score=58.35 Aligned_cols=81 Identities=12% Similarity=0.111 Sum_probs=44.5
Q ss_pred CChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEE
Q 003896 259 PAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAM 338 (788)
Q Consensus 259 PgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VV 338 (788)
|++.++.+.|+ ..-+.+.|+|+..+.++..+++.. |+ .+|+-..++.-++..+. ....+..+...-+..++.++
T Consensus 259 pgv~e~L~~Lk---~~Gi~laI~Snn~~~~v~~~l~~~-~~-~~l~l~~~~~v~~~~KP-Kp~~l~~al~~Lgl~pee~v 332 (387)
T 3nvb_A 259 TEFQEWVKKLK---NRGIIIAVCSKNNEGKAKEPFERN-PE-MVLKLDDIAVFVANWEN-KADNIRTIQRTLNIGFDSMV 332 (387)
T ss_dssp HHHHHHHHHHH---HTTCEEEEEEESCHHHHHHHHHHC-TT-CSSCGGGCSEEEEESSC-HHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHH---HCCCEEEEEcCCCHHHHHHHHhhc-cc-cccCccCccEEEeCCCC-cHHHHHHHHHHhCcCcccEE
Confidence 67444444444 456999999999999999999862 11 11111111111111111 11223333322124688899
Q ss_pred EEeCCcc
Q 003896 339 VIDDRCK 345 (788)
Q Consensus 339 IIDDR~d 345 (788)
+|||+..
T Consensus 333 ~VGDs~~ 339 (387)
T 3nvb_A 333 FLDDNPF 339 (387)
T ss_dssp EECSCHH
T ss_pred EECCCHH
Confidence 9999864
No 111
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=92.33 E-value=0.22 Score=53.70 Aligned_cols=76 Identities=13% Similarity=0.161 Sum_probs=46.4
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCc------------hHHHHHHHHhhCCCCCccccccccCceEeecCC-Cccc-
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAE------------RDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSG-SRKS- 322 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgt------------R~YA~~IlrLLDPdgklF~~r~l~~RIisresg-~~Ks- 322 (788)
+-|+..++++.|+ ..-|.|.|.|+.. +.++..+++.++-. | +-++|.++. ..|-
T Consensus 88 ~~pgv~e~L~~L~---~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~---f------d~i~~~~~~~~~KP~ 155 (416)
T 3zvl_A 88 LYPEIPKKLQELA---AEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP---F------QVLVATHAGLNRKPV 155 (416)
T ss_dssp SCTTHHHHHHHHH---HTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC---C------EEEEECSSSTTSTTS
T ss_pred hcccHHHHHHHHH---HCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC---E------EEEEECCCCCCCCCC
Confidence 5599666666664 4569999999966 33477777766542 3 345665432 2231
Q ss_pred ---HhhhcccC----CCCCCeEEEEeCCc
Q 003896 323 ---LLNVFQRG----LCHPKMAMVIDDRC 344 (788)
Q Consensus 323 ---L~rLf~~g----~~d~~~VVIIDDR~ 344 (788)
+..++... .++++.+++|+|+.
T Consensus 156 p~~~~~a~~~l~~~~~v~~~~~l~VGDs~ 184 (416)
T 3zvl_A 156 SGMWDHLQEQANEGIPISVEDSVFVGDAA 184 (416)
T ss_dssp SHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred HHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence 22222211 25788999999986
No 112
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=91.85 E-value=0.24 Score=44.98 Aligned_cols=81 Identities=11% Similarity=-0.079 Sum_probs=48.0
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEeCC
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDR 343 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIIDDR 343 (788)
+.+.|+ ..-+.++|.|++.+.++..+++.+.-+. +|.. .+. ...-+..++...+.+++.++.|+|+
T Consensus 39 ~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~~~~---------~kp-k~~~~~~~~~~~~~~~~~~~~vGD~ 104 (164)
T 3e8m_A 39 GIFWAH---NKGIPVGILTGEKTEIVRRRAEKLKVDY-LFQG---------VVD-KLSAAEELCNELGINLEQVAYIGDD 104 (164)
T ss_dssp HHHHHH---HTTCCEEEECSSCCHHHHHHHHHTTCSE-EECS---------CSC-HHHHHHHHHHHHTCCGGGEEEECCS
T ss_pred HHHHHH---HCCCEEEEEeCCChHHHHHHHHHcCCCE-eecc---------cCC-hHHHHHHHHHHcCCCHHHEEEECCC
Confidence 566776 3568999999999999999999876542 3331 111 1111222222112467889999998
Q ss_pred ccccccCCCCCeEEe
Q 003896 344 CKVWEDKDQPRVHVV 358 (788)
Q Consensus 344 ~dVW~~~~~NlI~VV 358 (788)
..=...-....+.++
T Consensus 105 ~~Di~~~~~ag~~~~ 119 (164)
T 3e8m_A 105 LNDAKLLKRVGIAGV 119 (164)
T ss_dssp GGGHHHHTTSSEEEC
T ss_pred HHHHHHHHHCCCeEE
Confidence 742222233355544
No 113
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=91.64 E-value=0.33 Score=47.53 Aligned_cols=33 Identities=27% Similarity=0.183 Sum_probs=22.1
Q ss_pred eEEEEeCCcceeecccccchHHHHHHHHHHhhcC
Q 003896 138 LAIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~ 171 (788)
-.|+|||||||+.....- -+.-+++|+++....
T Consensus 6 kli~fDlDGTLl~~~~~i-~~~~~~al~~l~~~G 38 (279)
T 4dw8_A 6 KLIVLDLDGTLTNSKKEI-SSRNRETLIRIQEQG 38 (279)
T ss_dssp CEEEECCCCCCSCTTSCC-CHHHHHHHHHHHHTT
T ss_pred eEEEEeCCCCCCCCCCcc-CHHHHHHHHHHHHCC
Confidence 368999999999875432 244566776665443
No 114
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=91.57 E-value=0.075 Score=53.05 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=23.1
Q ss_pred ceEEEEeCCcceeecccccchHHHHHHHHHHhhcC
Q 003896 137 CLAIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 137 ~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~ 171 (788)
.-.|+|||||||+......--+.-+++|+++....
T Consensus 21 ~kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G 55 (283)
T 3dao_A 21 IKLIATDIDGTLVKDGSLLIDPEYMSVIDRLIDKG 55 (283)
T ss_dssp CCEEEECCBTTTBSTTCSCCCHHHHHHHHHHHHTT
T ss_pred ceEEEEeCcCCCCCCCCCcCCHHHHHHHHHHHHCC
Confidence 34699999999997653112355566777765443
No 115
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=90.46 E-value=0.33 Score=47.77 Aligned_cols=80 Identities=14% Similarity=0.028 Sum_probs=47.2
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEeCC
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDR 343 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIIDDR 343 (788)
+.+.|+ ..-+.+.|.|...+..|..+++.+.-+. +|. .+ ++ ...-+..+...-+.+++.++.|.|+
T Consensus 84 ~L~~L~---~~G~~l~I~T~~~~~~~~~~l~~lgi~~-~f~------~~---k~-K~~~l~~~~~~lg~~~~~~~~vGDs 149 (211)
T 3ij5_A 84 GIRCLI---TSDIDVAIITGRRAKLLEDRANTLGITH-LYQ------GQ---SD-KLVAYHELLATLQCQPEQVAYIGDD 149 (211)
T ss_dssp HHHHHH---HTTCEEEEECSSCCHHHHHHHHHHTCCE-EEC------SC---SS-HHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCCch-hhc------cc---CC-hHHHHHHHHHHcCcCcceEEEEcCC
Confidence 566776 4678999999999999999999887542 333 11 11 1111222222111357788888887
Q ss_pred cc-ccccCCCCCeEEe
Q 003896 344 CK-VWEDKDQPRVHVV 358 (788)
Q Consensus 344 ~d-VW~~~~~NlI~VV 358 (788)
.. +=.... -.+.+.
T Consensus 150 ~nDi~~~~~-ag~~~a 164 (211)
T 3ij5_A 150 LIDWPVMAQ-VGLSVA 164 (211)
T ss_dssp GGGHHHHTT-SSEEEE
T ss_pred HHHHHHHHH-CCCEEE
Confidence 54 333333 355544
No 116
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=90.45 E-value=0.45 Score=44.65 Aligned_cols=77 Identities=14% Similarity=0.220 Sum_probs=46.9
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCC---------------chHHHHHHHHhhCCCCCccccccccCceE-e-----
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMA---------------ERDYALEMWRLLDPEGHLIGSKQLLDRVV-C----- 314 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmg---------------tR~YA~~IlrLLDPdgklF~~r~l~~RIi-s----- 314 (788)
++.|++.++++.|+ .+-|.++|+|++ .+.++..+++.++-. |. .|+ |
T Consensus 42 ~~~pg~~e~L~~L~---~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd------~v~~s~~~~~ 109 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQ---KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FD------EVLICPHLPA 109 (176)
T ss_dssp CBCTTHHHHHHHHH---HTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EE------EEEEECCCGG
T ss_pred cCCccHHHHHHHHH---HCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---ee------EEEEcCCCCc
Confidence 45699655555554 356999999999 688888888877644 43 332 3
Q ss_pred ecCCCcc----cHhhhcccCCCCCCeEEEEeCCc
Q 003896 315 VKSGSRK----SLLNVFQRGLCHPKMAMVIDDRC 344 (788)
Q Consensus 315 resg~~K----sL~rLf~~g~~d~~~VVIIDDR~ 344 (788)
-+.+..| -+..++..-+++++.+|+|+|+.
T Consensus 110 ~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~ 143 (176)
T 2fpr_A 110 DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRA 143 (176)
T ss_dssp GCCSSSTTSCGGGGGGC----CCGGGCEEEESSH
T ss_pred ccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCH
Confidence 1222222 23333332225678899999986
No 117
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=90.45 E-value=0.5 Score=44.63 Aligned_cols=80 Identities=11% Similarity=0.028 Sum_probs=47.1
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEeCC
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDR 343 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIIDDR 343 (788)
+.+.|+ ..-+.++|.|++.+.++..+++.++-+ .+|.. .+. ...-+..+....+++++.++.|+|+
T Consensus 61 ~l~~L~---~~g~~v~ivT~~~~~~~~~~l~~lgl~-~~~~~---------~kp-k~~~~~~~~~~~g~~~~~~~~iGD~ 126 (188)
T 2r8e_A 61 GIRCAL---TSDIEVAIITGRKAKLVEDRCATLGIT-HLYQG---------QSN-KLIAFSDLLEKLAIAPENVAYVGDD 126 (188)
T ss_dssp HHHHHH---TTTCEEEEECSSCCHHHHHHHHHHTCC-EEECS---------CSC-SHHHHHHHHHHHTCCGGGEEEEESS
T ss_pred HHHHHH---HCCCeEEEEeCCChHHHHHHHHHcCCc-eeecC---------CCC-CHHHHHHHHHHcCCCHHHEEEECCC
Confidence 456665 456999999999999999999987654 23331 111 1122333332112456788888887
Q ss_pred cc-ccccCCCCCeEEe
Q 003896 344 CK-VWEDKDQPRVHVV 358 (788)
Q Consensus 344 ~d-VW~~~~~NlI~VV 358 (788)
.. +-.... -.+.++
T Consensus 127 ~~Di~~a~~-ag~~~~ 141 (188)
T 2r8e_A 127 LIDWPVMEK-VGLSVA 141 (188)
T ss_dssp GGGHHHHTT-SSEEEE
T ss_pred HHHHHHHHH-CCCEEE
Confidence 63 333333 255554
No 118
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=90.41 E-value=0.37 Score=45.26 Aligned_cols=79 Identities=22% Similarity=0.290 Sum_probs=52.4
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCccc----HhhhcccC
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKS----LLNVFQRG 330 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~Ks----L~rLf~~g 330 (788)
+++.|+..++.+.|+ +.|.+.|.|++.+.++..+++.++-. . +++.+++.+ +..|. +..++..-
T Consensus 83 ~~~~~g~~~~l~~L~----~~~~l~i~T~~~~~~~~~~l~~~gl~-~------~f~~i~~~~-~~~Kp~p~~~~~~~~~l 150 (210)
T 2ah5_A 83 AQLFPQIIDLLEELS----SSYPLYITTTKDTSTAQDMAKNLEIH-H------FFDGIYGSS-PEAPHKADVIHQALQTH 150 (210)
T ss_dssp CEECTTHHHHHHHHH----TTSCEEEEEEEEHHHHHHHHHHTTCG-G------GCSEEEEEC-SSCCSHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHH----cCCeEEEEeCCCHHHHHHHHHhcCch-h------heeeeecCC-CCCCCChHHHHHHHHHc
Confidence 467799666555554 37899999999999999999877533 2 335666665 43221 22222222
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
++.++.+|+|+|+..
T Consensus 151 g~~p~~~~~vgDs~~ 165 (210)
T 2ah5_A 151 QLAPEQAIIIGDTKF 165 (210)
T ss_dssp TCCGGGEEEEESSHH
T ss_pred CCCcccEEEECCCHH
Confidence 357889999999853
No 119
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=90.37 E-value=0.33 Score=45.55 Aligned_cols=90 Identities=9% Similarity=0.056 Sum_probs=56.3
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCch---HHHHHHHHhhCCCCCccccccccCceEeecC-----CCccc----H
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAER---DYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-----GSRKS----L 323 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR---~YA~~IlrLLDPdgklF~~r~l~~RIisres-----g~~Ks----L 323 (788)
++.|++.++++.|+ ..-|.++|.|++.+ .++..+++.+.-.. +| +.+++.++ +..|- +
T Consensus 34 ~~~~g~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~-~f------d~i~~~~~~~~~~~~~KP~p~~~ 103 (189)
T 3ib6_A 34 VLRKNAKETLEKVK---QLGFKQAILSNTATSDTEVIKRVLTNFGIID-YF------DFIYASNSELQPGKMEKPDKTIF 103 (189)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEECCSSCCHHHHHHHHHHTTCGG-GE------EEEEECCTTSSTTCCCTTSHHHH
T ss_pred eeCcCHHHHHHHHH---HCCCEEEEEECCCccchHHHHHHHHhcCchh-he------EEEEEccccccccCCCCcCHHHH
Confidence 46699555555554 34599999999987 88888888776542 33 46666543 33231 2
Q ss_pred hhhcccCCCCCCeEEEEeCC--ccccccCCCCCeE
Q 003896 324 LNVFQRGLCHPKMAMVIDDR--CKVWEDKDQPRVH 356 (788)
Q Consensus 324 ~rLf~~g~~d~~~VVIIDDR--~dVW~~~~~NlI~ 356 (788)
..++..-+++++.+|+|+|+ .|+-..... ++.
T Consensus 104 ~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~a-G~~ 137 (189)
T 3ib6_A 104 DFTLNALQIDKTEAVMVGNTFESDIIGANRA-GIH 137 (189)
T ss_dssp HHHHHHHTCCGGGEEEEESBTTTTHHHHHHT-TCE
T ss_pred HHHHHHcCCCcccEEEECCCcHHHHHHHHHC-CCe
Confidence 22222212578999999999 467655543 444
No 120
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=89.75 E-value=0.32 Score=45.46 Aligned_cols=82 Identities=13% Similarity=0.018 Sum_probs=50.0
Q ss_pred EEEecCChHHHHHHHHHhccccEEEEEEeCCc-hHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCC
Q 003896 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAE-RDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLC 332 (788)
Q Consensus 254 ~VKLRPgweeLreFL~ak~sk~FElyVyTmgt-R~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~ 332 (788)
.+++.|+..++.+.|+ .+-+.++|.|++. +.++..+++.++-.. +|. .+++........+..++..-++
T Consensus 66 ~~~~~~g~~e~L~~L~---~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~------~~~~~~~~k~~~~~~~~~~~~~ 135 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQ---SLGVPGAAASRTSEIEGANQLLELFDLFR-YFV------HREIYPGSKITHFERLQQKTGI 135 (187)
T ss_dssp EECCCTTHHHHHHHHH---HHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEE------EEEESSSCHHHHHHHHHHHHCC
T ss_pred ccCcchhHHHHHHHHH---HCCceEEEEeCCCChHHHHHHHHHcCcHh-hcc------eeEEEeCchHHHHHHHHHHcCC
Confidence 3567799555555554 3459999999999 799999999876542 333 3322221111223333222124
Q ss_pred CCCeEEEEeCCcc
Q 003896 333 HPKMAMVIDDRCK 345 (788)
Q Consensus 333 d~~~VVIIDDR~d 345 (788)
+++.+++|+|+..
T Consensus 136 ~~~~~~~igD~~~ 148 (187)
T 2wm8_A 136 PFSQMIFFDDERR 148 (187)
T ss_dssp CGGGEEEEESCHH
T ss_pred ChHHEEEEeCCcc
Confidence 6788999999854
No 121
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=87.82 E-value=0.4 Score=57.53 Aligned_cols=69 Identities=17% Similarity=0.182 Sum_probs=52.1
Q ss_pred CChHHHHHHHHHhCCCCceEEEEeeeC-------------CC-ceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHH
Q 003896 625 YLSIGVLQEIGKRCSSKVEFRSVVSTS-------------KD-LQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYL 690 (788)
Q Consensus 625 ~dyKS~LQE~~QK~~~~peYelveesG-------------H~-~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L 690 (788)
..+|..+. ||.|.+..|++.+..+ .. ..|.|.+.+-+-.+-.|+-+-||.|||.||+.||++|
T Consensus 17 ~~pk~~~~---q~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~lp~~~~~~~~~~~kkd~eq~aa~~al~~~ 93 (950)
T 3htx_A 17 PTPKAIIH---QKFGAKASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSNVFKKKKDSEQSAAELALDKL 93 (950)
T ss_dssp CCCHHHHH---HTTGGGSEEEEEEECCSCSCCCTTCCSCCCCCCEEEEEEECSSCEEECCCBSCHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHH---HHhCcceeeeehhhhcccCCCCCccccCCCCCeeEEEEeeCCCceEecchhhccccHHHHHHHHHHHHh
Confidence 36787765 4567778998754332 11 3799999997766667999999999999999999998
Q ss_pred HHhhhc
Q 003896 691 AEKYVA 696 (788)
Q Consensus 691 ~~~yl~ 696 (788)
+.+..+
T Consensus 94 g~~~~~ 99 (950)
T 3htx_A 94 GIRPQN 99 (950)
T ss_dssp TSTTTS
T ss_pred CCCccc
Confidence 764443
No 122
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=87.82 E-value=0.33 Score=49.90 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=28.9
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhh
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLL 296 (788)
.+|++.++.++|+ . .+.+.|+|...+.|+..+.+.+
T Consensus 104 ~~~~~~~~l~~l~---~-g~~~~i~t~~~~~~~~~~~~~~ 139 (332)
T 1y8a_A 104 FVPDAEKAMATLQ---E-RWTPVVISTSYTQYLRRTASMI 139 (332)
T ss_dssp BCTTHHHHHHHHH---T-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHH---c-CCcEEEEECCceEEEcccchhh
Confidence 3588788888886 3 6789999999999998887754
No 123
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=87.76 E-value=0.29 Score=47.44 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=46.8
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEeCC
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDR 343 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIIDDR 343 (788)
..++|+ ..-|.+.|.|+..+..+..+++.|.-+. +|.. .+. ...-|..+....+.+++.++.|.|.
T Consensus 60 ~l~~L~---~~G~~~~ivT~~~~~~~~~~l~~lgi~~-~~~~---------~k~-k~~~~~~~~~~~~~~~~~~~~vGD~ 125 (195)
T 3n07_A 60 GVKALM---NAGIEIAIITGRRSQIVENRMKALGISL-IYQG---------QDD-KVQAYYDICQKLAIAPEQTGYIGDD 125 (195)
T ss_dssp HHHHHH---HTTCEEEEECSSCCHHHHHHHHHTTCCE-EECS---------CSS-HHHHHHHHHHHHCCCGGGEEEEESS
T ss_pred HHHHHH---HCCCEEEEEECcCHHHHHHHHHHcCCcE-EeeC---------CCC-cHHHHHHHHHHhCCCHHHEEEEcCC
Confidence 356776 4669999999999999999999886542 2321 111 1112333322112467778888887
Q ss_pred ccccccCCCCCeEEe
Q 003896 344 CKVWEDKDQPRVHVV 358 (788)
Q Consensus 344 ~dVW~~~~~NlI~VV 358 (788)
..=...-..-.+.+.
T Consensus 126 ~nDi~~~~~ag~~va 140 (195)
T 3n07_A 126 LIDWPVMEKVALRVC 140 (195)
T ss_dssp GGGHHHHTTSSEEEE
T ss_pred HHHHHHHHHCCCEEE
Confidence 543222222345543
No 124
>2db2_A KIAA0890 protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.81 E-value=0.85 Score=42.56 Aligned_cols=69 Identities=17% Similarity=0.206 Sum_probs=49.9
Q ss_pred CChHHHHHHHHHhC-C-----CCceEEEEeeeC-CCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHHHhhh
Q 003896 625 YLSIGVLQEIGKRC-S-----SKVEFRSVVSTS-KDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYV 695 (788)
Q Consensus 625 ~dyKS~LQE~~QK~-~-----~~peYelveesG-H~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~~~yl 695 (788)
-.+|++|..-.|+- + ....|-. ..| ..+.-++.+.+---.--+|.|+.|-+||.+||-.|+++|+.-.+
T Consensus 17 p~PKnLL~~ViqrA~~ss~~kd~l~~~~--t~g~k~K~~tl~l~WP~~mef~a~G~rK~eAE~kAAA~AC~kLK~Lgl 92 (119)
T 2db2_A 17 PQPKNLLNSVIGRALGISHAKDKLVYVH--TNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGL 92 (119)
T ss_dssp SCHHHHHHHHHHHHTTHHHHHHHEEEEE--CCSSSSEEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHTS
T ss_pred CChHHHHHHHHHHHHccCchhhheeEEe--ecCCceeEEEEEecCCCcEEEEeeccchHHHHHHHHHHHHHHHHHcCc
Confidence 37899999988875 2 2223333 234 55666666666555556999999999999999999999986544
No 125
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=86.66 E-value=0.94 Score=43.33 Aligned_cols=79 Identities=18% Similarity=0.024 Sum_probs=51.1
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++.+.|+ .+.|.+.|.|++.+.++..+++.++-. +|. .+++.+. +..| -+..+...
T Consensus 109 ~~~~~g~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~------~~~~~~~~~~~Kp~p~~~~~~~~~ 177 (240)
T 2hi0_A 109 TGPFPGILDLMKNLR---QKGVKLAVVSNKPNEAVQVLVEELFPG--SFD------FALGEKSGIRRKPAPDMTSECVKV 177 (240)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHSTT--TCS------EEEEECTTSCCTTSSHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCCc--cee------EEEecCCCCCCCCCHHHHHHHHHH
Confidence 467799665555554 356999999999999999999987643 444 4555432 2112 12222221
Q ss_pred CCCCCCeEEEEeCCc
Q 003896 330 GLCHPKMAMVIDDRC 344 (788)
Q Consensus 330 g~~d~~~VVIIDDR~ 344 (788)
-+.+++.+|+|+|+.
T Consensus 178 l~~~~~~~~~vGDs~ 192 (240)
T 2hi0_A 178 LGVPRDKCVYIGDSE 192 (240)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred cCCCHHHeEEEcCCH
Confidence 124788999999985
No 126
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=86.62 E-value=1.7 Score=40.35 Aligned_cols=81 Identities=11% Similarity=0.004 Sum_probs=49.6
Q ss_pred EEecCChHHHHHHHHHhccc-cEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCC-C-ccc----Hhhhc
Q 003896 255 VRLRPAWEDLRSYLIAKGRK-RFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSG-S-RKS----LLNVF 327 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk-~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg-~-~Ks----L~rLf 327 (788)
+++.|++.++.++|+ .. .+.+.|+|++.+.++..+++.++-.. +|. .+++..+. . .|. +..+.
T Consensus 92 ~~~~~~~~~~l~~l~---~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~------~~~~~~~~~~~~k~~~~~~~~~~ 161 (234)
T 2hcf_A 92 ITLLEGVRELLDALS---SRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFP------FGAFADDALDRNELPHIALERAR 161 (234)
T ss_dssp EEECTTHHHHHHHHH---TCTTEEEEEECSSCHHHHHHHHHTTTCST-TCS------CEECTTTCSSGGGHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHH---hCCCceEEEEcCCcHHHHHHHHHHCCchh-hcC------cceecCCCcCccchHHHHHHHHH
Confidence 467799655555554 23 59999999999999999998876543 343 23332221 1 121 22222
Q ss_pred ccCC--CCCCeEEEEeCCcc
Q 003896 328 QRGL--CHPKMAMVIDDRCK 345 (788)
Q Consensus 328 ~~g~--~d~~~VVIIDDR~d 345 (788)
..-+ .+++.++.|+|+..
T Consensus 162 ~~lg~~~~~~~~i~iGD~~~ 181 (234)
T 2hcf_A 162 RMTGANYSPSQIVIIGDTEH 181 (234)
T ss_dssp HHHCCCCCGGGEEEEESSHH
T ss_pred HHhCCCCCcccEEEECCCHH
Confidence 2112 36788999999864
No 127
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=86.58 E-value=0.88 Score=42.15 Aligned_cols=86 Identities=12% Similarity=0.171 Sum_probs=55.5
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|+ +.++|+ .+.+.|.++|+|++.+.++..+++.+.-.. +++.+++.+. +..| -+..++..
T Consensus 106 ~~~~~~---~~~~l~-~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-------~f~~~~~~~~~~~~kp~~~~~~~~~~~ 174 (240)
T 3qnm_A 106 SGLMPH---AKEVLE-YLAPQYNLYILSNGFRELQSRKMRSAGVDR-------YFKKIILSEDLGVLKPRPEIFHFALSA 174 (240)
T ss_dssp CCBSTT---HHHHHH-HHTTTSEEEEEECSCHHHHHHHHHHHTCGG-------GCSEEEEGGGTTCCTTSHHHHHHHHHH
T ss_pred CCcCcc---HHHHHH-HHHcCCeEEEEeCCchHHHHHHHHHcChHh-------hceeEEEeccCCCCCCCHHHHHHHHHH
Confidence 345688 555665 444779999999999999999998775331 2356666543 2222 23333333
Q ss_pred CCCCCCeEEEEeCCc--cccccCC
Q 003896 330 GLCHPKMAMVIDDRC--KVWEDKD 351 (788)
Q Consensus 330 g~~d~~~VVIIDDR~--dVW~~~~ 351 (788)
-+++++.+|.|+|+. |+-....
T Consensus 175 lgi~~~~~~~iGD~~~~Di~~a~~ 198 (240)
T 3qnm_A 175 TQSELRESLMIGDSWEADITGAHG 198 (240)
T ss_dssp TTCCGGGEEEEESCTTTTHHHHHH
T ss_pred cCCCcccEEEECCCchHhHHHHHH
Confidence 336789999999994 5554443
No 128
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=86.39 E-value=0.51 Score=45.09 Aligned_cols=68 Identities=12% Similarity=-0.035 Sum_probs=41.8
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEeCC
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDR 343 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIIDDR 343 (788)
..+.|+ ..-|.+.|.|++.+..+..+++.+.-+. +|. .+ +. ...-+..+....+..++.++.|+|+
T Consensus 54 ~l~~L~---~~g~~~~ivTn~~~~~~~~~l~~lgl~~-~~~------~~---kp-k~~~~~~~~~~~~~~~~~~~~vGD~ 119 (191)
T 3n1u_A 54 GLKLLM---AAGIQVAIITTAQNAVVDHRMEQLGITH-YYK------GQ---VD-KRSAYQHLKKTLGLNDDEFAYIGDD 119 (191)
T ss_dssp HHHHHH---HTTCEEEEECSCCSHHHHHHHHHHTCCE-EEC------SC---SS-CHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHH---HCCCeEEEEeCcChHHHHHHHHHcCCcc-cee------CC---CC-hHHHHHHHHHHhCCCHHHEEEECCC
Confidence 356676 4668999999999999999999876542 333 11 11 1111222222111457778888887
Q ss_pred cc
Q 003896 344 CK 345 (788)
Q Consensus 344 ~d 345 (788)
..
T Consensus 120 ~~ 121 (191)
T 3n1u_A 120 LP 121 (191)
T ss_dssp GG
T ss_pred HH
Confidence 63
No 129
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=85.79 E-value=1 Score=42.67 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=56.5
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCccc----Hhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRKS----LLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~Ks----L~rLf~~ 329 (788)
+++.|++.++.++|+ ..-|.++|+|++.+.++..+++.++-. .+| +.+++.+. +..|. +..++..
T Consensus 93 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f------~~~~~~~~~~~~Kp~~~~~~~~~~~ 162 (241)
T 2hoq_A 93 LREVPGARKVLIRLK---ELGYELGIITDGNPVKQWEKILRLELD-DFF------EHVIISDFEGVKKPHPKIFKKALKA 162 (241)
T ss_dssp CCBCTTHHHHHHHHH---HHTCEEEEEECSCHHHHHHHHHHTTCG-GGC------SEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH---HCCCEEEEEECCCchhHHHHHHHcCcH-hhc------cEEEEeCCCCCCCCCHHHHHHHHHH
Confidence 356799655555554 345899999999999999999887533 123 45665532 22222 2333222
Q ss_pred CCCCCCeEEEEeCCc--cccccCCCCCeE
Q 003896 330 GLCHPKMAMVIDDRC--KVWEDKDQPRVH 356 (788)
Q Consensus 330 g~~d~~~VVIIDDR~--dVW~~~~~NlI~ 356 (788)
-+..++.++.|+|+. |+-..... ++.
T Consensus 163 ~g~~~~~~i~iGD~~~~Di~~a~~a-G~~ 190 (241)
T 2hoq_A 163 FNVKPEEALMVGDRLYSDIYGAKRV-GMK 190 (241)
T ss_dssp HTCCGGGEEEEESCTTTTHHHHHHT-TCE
T ss_pred cCCCcccEEEECCCchHhHHHHHHC-CCE
Confidence 124688999999986 56655443 443
No 130
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=85.57 E-value=0.68 Score=45.60 Aligned_cols=87 Identities=13% Similarity=0.092 Sum_probs=54.9
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++++.|+ +.|.++|.|++.+.++..+++.++-. .+| +.+++.++ +..| -+..++..
T Consensus 120 ~~~~~g~~~~L~~L~----~~~~l~i~Tn~~~~~~~~~l~~~gl~-~~f------~~i~~~~~~~~~KP~p~~~~~~~~~ 188 (260)
T 2gfh_A 120 MILADDVKAMLTELR----KEVRLLLLTNGDRQTQREKIEACACQ-SYF------DAIVIGGEQKEEKPAPSIFYHCCDL 188 (260)
T ss_dssp CCCCHHHHHHHHHHH----TTSEEEEEECSCHHHHHHHHHHHTCG-GGC------SEEEEGGGSSSCTTCHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHH----cCCcEEEEECcChHHHHHHHHhcCHH-hhh------heEEecCCCCCCCCCHHHHHHHHHH
Confidence 345688555555553 45999999999999999999987643 233 45555533 2223 12222221
Q ss_pred CCCCCCeEEEEeCC--ccccccCCC
Q 003896 330 GLCHPKMAMVIDDR--CKVWEDKDQ 352 (788)
Q Consensus 330 g~~d~~~VVIIDDR--~dVW~~~~~ 352 (788)
.+++++.+|+|+|+ .|+-.....
T Consensus 189 ~~~~~~~~~~vGDs~~~Di~~A~~a 213 (260)
T 2gfh_A 189 LGVQPGDCVMVGDTLETDIQGGLNA 213 (260)
T ss_dssp HTCCGGGEEEEESCTTTHHHHHHHT
T ss_pred cCCChhhEEEECCCchhhHHHHHHC
Confidence 12578899999994 577766554
No 131
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=85.56 E-value=0.77 Score=42.37 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=50.0
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|+ +.++|+ .+.+.|.++|.|++.+.++..+++.+.-. .+| +.+++.++ +..| -+..++..
T Consensus 82 ~~~~~~---~~~~l~-~l~~~~~~~i~s~~~~~~~~~~l~~~~l~-~~f------~~~~~~~~~~~~KP~~~~~~~~~~~ 150 (209)
T 2hdo_A 82 IELYPG---ITSLFE-QLPSELRLGIVTSQRRNELESGMRSYPFM-MRM------AVTISADDTPKRKPDPLPLLTALEK 150 (209)
T ss_dssp CEECTT---HHHHHH-HSCTTSEEEEECSSCHHHHHHHHTTSGGG-GGE------EEEECGGGSSCCTTSSHHHHHHHHH
T ss_pred CCcCCC---HHHHHH-HHHhcCcEEEEeCCCHHHHHHHHHHcChH-hhc------cEEEecCcCCCCCCCcHHHHHHHHH
Confidence 467899 555555 34333999999999999999998876432 223 34554432 2223 23333332
Q ss_pred CCCCCCeEEEEeCCcc
Q 003896 330 GLCHPKMAMVIDDRCK 345 (788)
Q Consensus 330 g~~d~~~VVIIDDR~d 345 (788)
-+++++.++.|+|+..
T Consensus 151 ~~~~~~~~i~vGD~~~ 166 (209)
T 2hdo_A 151 VNVAPQNALFIGDSVS 166 (209)
T ss_dssp TTCCGGGEEEEESSHH
T ss_pred cCCCcccEEEECCChh
Confidence 2357788999999853
No 132
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=84.42 E-value=1.1 Score=41.81 Aligned_cols=80 Identities=19% Similarity=0.088 Sum_probs=50.1
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
++.|++.++.+.|+ ..-|.++|+|++.+.++..+++.++-. .+| +.+++.+. +..| -+..++..-
T Consensus 104 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f------~~~~~~~~~~~~kp~~~~~~~~~~~l 173 (237)
T 4ex6_A 104 LLYPGVLEGLDRLS---AAGFRLAMATSKVEKAARAIAELTGLD-TRL------TVIAGDDSVERGKPHPDMALHVARGL 173 (237)
T ss_dssp GBCTTHHHHHHHHH---HTTEEEEEECSSCHHHHHHHHHHHTGG-GTC------SEEECTTTSSSCTTSSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHH---hCCCcEEEEcCCChHHHHHHHHHcCch-hhe------eeEEeCCCCCCCCCCHHHHHHHHHHc
Confidence 35689555555554 345999999999999999999987532 122 44555433 1111 233333222
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
++.++.++.|+|+..
T Consensus 174 g~~~~~~i~vGD~~~ 188 (237)
T 4ex6_A 174 GIPPERCVVIGDGVP 188 (237)
T ss_dssp TCCGGGEEEEESSHH
T ss_pred CCCHHHeEEEcCCHH
Confidence 257889999999874
No 133
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=84.23 E-value=1 Score=42.61 Aligned_cols=81 Identities=17% Similarity=0.221 Sum_probs=50.1
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++.+.|+ ..-|.++|.|++.+.++..+++.++-. .+| +.+++.++ +..| -+..++..
T Consensus 82 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~gl~-~~f------~~i~~~~~~~~~Kp~~~~~~~~~~~ 151 (222)
T 2nyv_A 82 TKPYPEIPYTLEALK---SKGFKLAVVSNKLEELSKKILDILNLS-GYF------DLIVGGDTFGEKKPSPTPVLKTLEI 151 (222)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTTCG-GGC------SEEECTTSSCTTCCTTHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCeEEEEcCCCHHHHHHHHHHcCCH-HHh------eEEEecCcCCCCCCChHHHHHHHHH
Confidence 567899555555554 345999999999999999999887632 223 34544322 1111 22323221
Q ss_pred CCCCCCeEEEEeCCcc
Q 003896 330 GLCHPKMAMVIDDRCK 345 (788)
Q Consensus 330 g~~d~~~VVIIDDR~d 345 (788)
-++.++.++.|+|+..
T Consensus 152 ~~~~~~~~~~vGD~~~ 167 (222)
T 2nyv_A 152 LGEEPEKALIVGDTDA 167 (222)
T ss_dssp HTCCGGGEEEEESSHH
T ss_pred hCCCchhEEEECCCHH
Confidence 1246788999999853
No 134
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=83.16 E-value=1.5 Score=42.21 Aligned_cols=80 Identities=16% Similarity=0.148 Sum_probs=50.3
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhccc
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQR 329 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~ 329 (788)
+++.|++.++.+.|+ .+-|.++|.|++.+.++..+++.+.-. .+| +.+++.+. +..| -+..+...
T Consensus 113 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~gl~-~~f------~~~~~~~~~~~~Kp~~~~~~~~~~~ 182 (243)
T 2hsz_A 113 SRLYPNVKETLEALK---AQGYILAVVTNKPTKHVQPILTAFGID-HLF------SEMLGGQSLPEIKPHPAPFYYLCGK 182 (243)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTTCG-GGC------SEEECTTTSSSCTTSSHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCEEEEEECCcHHHHHHHHHHcCch-heE------EEEEecccCCCCCcCHHHHHHHHHH
Confidence 467899555555554 345999999999999999999987533 233 34544432 2222 12222221
Q ss_pred CCCCCCeEEEEeCCc
Q 003896 330 GLCHPKMAMVIDDRC 344 (788)
Q Consensus 330 g~~d~~~VVIIDDR~ 344 (788)
.++.++.++.|+|+.
T Consensus 183 ~~~~~~~~~~vGD~~ 197 (243)
T 2hsz_A 183 FGLYPKQILFVGDSQ 197 (243)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCcChhhEEEEcCCH
Confidence 124678899999985
No 135
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=81.94 E-value=0.78 Score=44.64 Aligned_cols=30 Identities=30% Similarity=0.420 Sum_probs=17.6
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHh
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWI 168 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~ 168 (788)
.|+|||||||+..+.-.--+.-+++|+++.
T Consensus 14 li~~DlDGTLl~~~~~~i~~~~~~al~~l~ 43 (268)
T 3r4c_A 14 VLLLDVDGTLLSFETHKVSQSSIDALKKVH 43 (268)
T ss_dssp EEEECSBTTTBCTTTCSCCHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCCCCCcCCHHHHHHHHHHH
Confidence 589999999998432111233344554443
No 136
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=81.90 E-value=1.2 Score=42.42 Aligned_cols=90 Identities=9% Similarity=-0.035 Sum_probs=54.3
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPK 335 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~ 335 (788)
.+.|++.++.++| ...|.+.|+|++.+.++..+++.++-. .+| +.+++.......-+..++..-+++++
T Consensus 112 ~~~~~~~~~l~~l----~~~~~~~i~t~~~~~~~~~~l~~~~l~-~~f------~~i~~~~kp~~~~~~~~~~~l~~~~~ 180 (251)
T 2pke_A 112 EVIAGVREAVAAI----AADYAVVLITKGDLFHQEQKIEQSGLS-DLF------PRIEVVSEKDPQTYARVLSEFDLPAE 180 (251)
T ss_dssp CBCTTHHHHHHHH----HTTSEEEEEEESCHHHHHHHHHHHSGG-GTC------CCEEEESCCSHHHHHHHHHHHTCCGG
T ss_pred CcCccHHHHHHHH----HCCCEEEEEeCCCHHHHHHHHHHcCcH-HhC------ceeeeeCCCCHHHHHHHHHHhCcCch
Confidence 4569955555555 356999999999999999998876533 123 45555422222222222221125788
Q ss_pred eEEEEeCCc--cccccCCCCCeEE
Q 003896 336 MAMVIDDRC--KVWEDKDQPRVHV 357 (788)
Q Consensus 336 ~VVIIDDR~--dVW~~~~~NlI~V 357 (788)
.+|.|+|+. |+-..... ++.+
T Consensus 181 ~~i~iGD~~~~Di~~a~~a-G~~~ 203 (251)
T 2pke_A 181 RFVMIGNSLRSDVEPVLAI-GGWG 203 (251)
T ss_dssp GEEEEESCCCCCCHHHHHT-TCEE
T ss_pred hEEEECCCchhhHHHHHHC-CCEE
Confidence 999999996 55544433 4443
No 137
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=80.72 E-value=1 Score=44.62 Aligned_cols=16 Identities=25% Similarity=0.326 Sum_probs=13.6
Q ss_pred ceEEEEeCCcceeecc
Q 003896 137 CLAIVFDLDETLIVAN 152 (788)
Q Consensus 137 ~L~lV~DLDeTLi~A~ 152 (788)
...|+|||||||+.+.
T Consensus 22 ~kliifDlDGTLlds~ 37 (289)
T 3gyg_A 22 QYIVFCDFDETYFPHT 37 (289)
T ss_dssp SEEEEEETBTTTBCSS
T ss_pred CeEEEEECCCCCcCCC
Confidence 4579999999999964
No 138
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=80.64 E-value=0.94 Score=43.85 Aligned_cols=30 Identities=23% Similarity=0.140 Sum_probs=19.8
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhh
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIA 169 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~ 169 (788)
.|+|||||||+..... --+.-+++|+++..
T Consensus 7 li~fDlDGTLl~~~~~-i~~~~~~al~~l~~ 36 (274)
T 3fzq_A 7 LLILDIDGTLRDEVYG-IPESAKHAIRLCQK 36 (274)
T ss_dssp EEEECSBTTTBBTTTB-CCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCc-CCHHHHHHHHHHHH
Confidence 5899999999987642 12344556655543
No 139
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=79.54 E-value=1.1 Score=38.40 Aligned_cols=77 Identities=13% Similarity=0.152 Sum_probs=47.0
Q ss_pred CChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeec-CCCccc----HhhhcccCCCC
Q 003896 259 PAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVK-SGSRKS----LLNVFQRGLCH 333 (788)
Q Consensus 259 PgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisre-sg~~Ks----L~rLf~~g~~d 333 (788)
|++.++.+.|+ ..-+.++|.|++.+.++..+++.++-. .+| +.+++.. .+..|. +..++..-++.
T Consensus 21 ~~~~~~l~~L~---~~G~~~~i~S~~~~~~~~~~l~~~~l~-~~f------~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~ 90 (137)
T 2pr7_A 21 RRWRNLLAAAK---KNGVGTVILSNDPGGLGAAPIRELETN-GVV------DKVLLSGELGVEKPEEAAFQAAADAIDLP 90 (137)
T ss_dssp HHHHHHHHHHH---HTTCEEEEEECSCCGGGGHHHHHHHHT-TSS------SEEEEHHHHSCCTTSHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHCChH-hhc------cEEEEeccCCCCCCCHHHHHHHHHHcCCC
Confidence 77444444443 345999999999999999888876432 123 4555442 222221 22233222246
Q ss_pred CCeEEEEeCCcc
Q 003896 334 PKMAMVIDDRCK 345 (788)
Q Consensus 334 ~~~VVIIDDR~d 345 (788)
++.+++|+|+..
T Consensus 91 ~~~~~~vgD~~~ 102 (137)
T 2pr7_A 91 MRDCVLVDDSIL 102 (137)
T ss_dssp GGGEEEEESCHH
T ss_pred cccEEEEcCCHH
Confidence 788999999875
No 140
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=79.13 E-value=1.9 Score=39.33 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=44.9
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCch---------------HHHHHHHHhhCCCCCccccccccCceE-ee----
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAER---------------DYALEMWRLLDPEGHLIGSKQLLDRVV-CV---- 315 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR---------------~YA~~IlrLLDPdgklF~~r~l~~RIi-sr---- 315 (788)
++.|+..++.+.|+ .+-|.+.|.|++.+ .++..+++.+. .+|. .++ |.
T Consensus 27 ~~~~g~~~~l~~L~---~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~------~~~~~~~~~~ 94 (179)
T 3l8h_A 27 IALPGSLQAIARLT---QADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG---GVVD------AIFMCPHGPD 94 (179)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT---CCCC------EEEEECCCTT
T ss_pred eECcCHHHHHHHHH---HCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC---Ccee------EEEEcCCCCC
Confidence 34589555555554 35599999999987 56677776665 3333 222 22
Q ss_pred cC-CCcc----cHhhhcccCCCCCCeEEEEeCCc
Q 003896 316 KS-GSRK----SLLNVFQRGLCHPKMAMVIDDRC 344 (788)
Q Consensus 316 es-g~~K----sL~rLf~~g~~d~~~VVIIDDR~ 344 (788)
++ +..| -+..++...+++++.+++|+|+.
T Consensus 95 ~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~ 128 (179)
T 3l8h_A 95 DGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSL 128 (179)
T ss_dssp SCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 11 1122 13333322225788899999986
No 141
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=78.46 E-value=1.4 Score=39.77 Aligned_cols=15 Identities=53% Similarity=0.696 Sum_probs=12.5
Q ss_pred EEEEeCCcceeeccc
Q 003896 139 AIVFDLDETLIVANT 153 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t 153 (788)
.++|||||||+....
T Consensus 3 ~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 3 KLIVDLDGTLTQANT 17 (126)
T ss_dssp EEEECSTTTTBCCCC
T ss_pred EEEEecCCCCCCCCC
Confidence 578999999998653
No 142
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=78.15 E-value=0.68 Score=45.38 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=18.9
Q ss_pred eEEEEeCCcceeecccccchHHHHHHHHHHh
Q 003896 138 LAIVFDLDETLIVANTMKSFEDRIEALRSWI 168 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~ 168 (788)
+.|+|||||||+... ...+.-.++|+.+.
T Consensus 1 ~li~~DlDGTLl~~~--~i~~~~~~al~~l~ 29 (259)
T 3zx4_A 1 MIVFTDLDGTLLDER--GELGPAREALERLR 29 (259)
T ss_dssp CEEEECCCCCCSCSS--SSCSTTHHHHHHHH
T ss_pred CEEEEeCCCCCcCCC--cCCHHHHHHHHHHH
Confidence 468999999999876 22233344555544
No 143
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=78.01 E-value=5.1 Score=36.44 Aligned_cols=80 Identities=19% Similarity=0.157 Sum_probs=50.5
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
.+.|++.++.++|+ ...+.++|+|++.+.++..+++.++-.. +| +.+++.+. +..| -+..+...-
T Consensus 89 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~k~~~~~~~~~~~~~ 158 (225)
T 3d6j_A 89 ILFPDTLPTLTHLK---KQGIRIGIISTKYRFRILSFLRNHMPDD-WF------DIIIGGEDVTHHKPDPEGLLLAIDRL 158 (225)
T ss_dssp EECTTHHHHHHHHH---HHTCEEEEECSSCHHHHHHHHHTSSCTT-CC------SEEECGGGCSSCTTSTHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHH---HCCCeEEEEECCCHHHHHHHHHHcCchh-he------eeeeehhhcCCCCCChHHHHHHHHHh
Confidence 45699666666664 3458999999999999999988765331 22 34444432 1112 234443322
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+.+++.++.|+|+..
T Consensus 159 ~~~~~~~i~iGD~~n 173 (225)
T 3d6j_A 159 KACPEEVLYIGDSTV 173 (225)
T ss_dssp TCCGGGEEEEESSHH
T ss_pred CCChHHeEEEcCCHH
Confidence 357888999999864
No 144
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=77.54 E-value=3.5 Score=37.56 Aligned_cols=80 Identities=11% Similarity=0.134 Sum_probs=50.2
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
.+.|++.++.++|+ ..-+.++|+|++.+.++..+++.++-. .+| +.+++.+. +..| .+..+...-
T Consensus 94 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~~~-~~~------~~~~~~~~~~~~kp~~~~~~~~~~~~ 163 (226)
T 1te2_A 94 PLLPGVREAVALCK---EQGLLVGLASASPLHMLEKVLTMFDLR-DSF------DALASAEKLPYSKPHPQVYLDCAAKL 163 (226)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTTCG-GGC------SEEEECTTSSCCTTSTHHHHHHHHHH
T ss_pred CcCccHHHHHHHHH---HCCCcEEEEeCCcHHHHHHHHHhcCcH-hhC------cEEEeccccCCCCCChHHHHHHHHHc
Confidence 45688665555554 345899999999999999998876532 122 44555432 2122 233333322
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+.+++.++.|+|+..
T Consensus 164 ~i~~~~~i~iGD~~n 178 (226)
T 1te2_A 164 GVDPLTCVALEDSVN 178 (226)
T ss_dssp TSCGGGEEEEESSHH
T ss_pred CCCHHHeEEEeCCHH
Confidence 256788999999864
No 145
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=74.21 E-value=1.8 Score=42.30 Aligned_cols=31 Identities=39% Similarity=0.450 Sum_probs=20.0
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhh
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIA 169 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~ 169 (788)
.|+|||||||+......--+.-+++++++..
T Consensus 4 li~~DlDGTLl~~~~~~i~~~~~~al~~l~~ 34 (261)
T 2rbk_A 4 ALFFDIDGTLVSFETHRIPSSTIEALEAAHA 34 (261)
T ss_dssp EEEECSBTTTBCTTTSSCCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCCCCCcCCHHHHHHHHHHHH
Confidence 5899999999987643112444555655443
No 146
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=74.20 E-value=1.6 Score=42.41 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=22.2
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhhcC
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~ 171 (788)
.|+|||||||+.... .++.-+++|++.....
T Consensus 8 li~~DlDGTLl~~~~--~~~~~~~ai~~l~~~G 38 (266)
T 3pdw_A 8 GYLIDLDGTMYNGTE--KIEEACEFVRTLKDRG 38 (266)
T ss_dssp EEEEECSSSTTCHHH--HHHHHHHHHHHHHHTT
T ss_pred EEEEeCcCceEeCCE--eCccHHHHHHHHHHCC
Confidence 689999999998643 3455677777665443
No 147
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=74.18 E-value=1.8 Score=42.06 Aligned_cols=31 Identities=29% Similarity=0.342 Sum_probs=21.1
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhhc
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~ 170 (788)
.++|||||||+..... --+.-+++++++...
T Consensus 5 li~~DlDGTLl~~~~~-i~~~~~~al~~l~~~ 35 (258)
T 2pq0_A 5 IVFFDIDGTLLDEQKQ-LPLSTIEAVRRLKQS 35 (258)
T ss_dssp EEEECTBTTTBCTTSC-CCHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHC
Confidence 5899999999987532 224456667666543
No 148
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=74.08 E-value=2 Score=43.16 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=20.6
Q ss_pred eEEEEeCCcceeecccccchHH-HHHHHHHHhhc
Q 003896 138 LAIVFDLDETLIVANTMKSFED-RIEALRSWIAR 170 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~e~-ri~~l~~w~~~ 170 (788)
-.|+|||||||+.....- .+. -+++|+++...
T Consensus 38 Kli~fDlDGTLld~~~~i-~~~~~~~al~~l~~~ 70 (304)
T 3l7y_A 38 KVIATDMDGTFLNSKGSY-DHNRFQRILKQLQER 70 (304)
T ss_dssp SEEEECCCCCCSCTTSCC-CHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCCCCCCcc-CHHHHHHHHHHHHHC
Confidence 368999999999875421 122 34666666543
No 149
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=73.35 E-value=2 Score=42.30 Aligned_cols=31 Identities=13% Similarity=0.234 Sum_probs=21.4
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhhc
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~ 170 (788)
.|+|||||||+..... --+.-+++|+++...
T Consensus 8 li~fDlDGTLl~~~~~-i~~~~~~al~~l~~~ 38 (290)
T 3dnp_A 8 LLALNIDGALLRSNGK-IHQATKDAIEYVKKK 38 (290)
T ss_dssp EEEECCCCCCSCTTSC-CCHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCCCCCCc-cCHHHHHHHHHHHHC
Confidence 5899999999987542 234456677666544
No 150
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=72.85 E-value=1.6 Score=41.45 Aligned_cols=13 Identities=15% Similarity=0.414 Sum_probs=11.9
Q ss_pred EEEEeCCcceeec
Q 003896 139 AIVFDLDETLIVA 151 (788)
Q Consensus 139 ~lV~DLDeTLi~A 151 (788)
+|+|||||||+..
T Consensus 14 ~i~fDlDGTLl~s 26 (271)
T 2x4d_A 14 GVLLDISGVLYDS 26 (271)
T ss_dssp EEEECCBTTTEEC
T ss_pred EEEEeCCCeEEec
Confidence 6899999999996
No 151
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=72.80 E-value=1.2 Score=41.39 Aligned_cols=15 Identities=33% Similarity=0.716 Sum_probs=13.1
Q ss_pred EEEEeCCcceeeccc
Q 003896 139 AIVFDLDETLIVANT 153 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t 153 (788)
+|+|||||||+....
T Consensus 6 ~iifDlDGTL~d~~~ 20 (234)
T 2hcf_A 6 LVLFDIDGTLLKVES 20 (234)
T ss_dssp EEEECCBTTTEEECT
T ss_pred EEEEcCCCCcccCcc
Confidence 689999999998764
No 152
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=72.10 E-value=7.5 Score=35.71 Aligned_cols=85 Identities=11% Similarity=0.105 Sum_probs=53.3
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCc---hHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcc
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAE---RDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQ 328 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgt---R~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~ 328 (788)
..|++.++.++|+ ...+.++|+|++. +.++..+++.++-.. +++.+++.++ +..| -+..+..
T Consensus 100 ~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-------~f~~~~~~~~~~~~kp~~~~~~~~~~ 169 (235)
T 2om6_A 100 VLEGTKEALQFVK---ERGLKTAVIGNVMFWPGSYTRLLLERFGLME-------FIDKTFFADEVLSYKPRKEMFEKVLN 169 (235)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-------GCSEEEEHHHHTCCTTCHHHHHHHHH
T ss_pred cCccHHHHHHHHH---HCCCEEEEEcCCcccchhHHHHHHHhCCcHH-------HhhhheeccccCCCCCCHHHHHHHHH
Confidence 3689666666665 3458999999999 999988888775331 2345555422 2222 1233332
Q ss_pred cCCCCCCeEEEEeCCc--cccccCC
Q 003896 329 RGLCHPKMAMVIDDRC--KVWEDKD 351 (788)
Q Consensus 329 ~g~~d~~~VVIIDDR~--dVW~~~~ 351 (788)
.-+++++.++.|+|+. |+-....
T Consensus 170 ~lgi~~~~~~~iGD~~~nDi~~a~~ 194 (235)
T 2om6_A 170 SFEVKPEESLHIGDTYAEDYQGARK 194 (235)
T ss_dssp HTTCCGGGEEEEESCTTTTHHHHHH
T ss_pred HcCCCccceEEECCChHHHHHHHHH
Confidence 2235789999999997 5654443
No 153
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=71.51 E-value=2.8 Score=45.43 Aligned_cols=41 Identities=17% Similarity=0.026 Sum_probs=32.0
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCC
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDP 298 (788)
+++.||+.++.+.|+ .+-|.+.|.|++.+.++..+++.++-
T Consensus 214 ~~l~pGv~elL~~Lk---~~Gi~laIvTn~~~~~~~~~L~~lgL 254 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLK---GAGFELGIATGRPYTETVVPFENLGL 254 (384)
T ss_dssp SSCHHHHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred CCcCcCHHHHHHHHH---hCCCEEEEEeCCcHHHHHHHHHHcCC
Confidence 456789666666664 35699999999999999999998753
No 154
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=71.20 E-value=1.4 Score=40.30 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=12.8
Q ss_pred eEEEEeCCcceeecc
Q 003896 138 LAIVFDLDETLIVAN 152 (788)
Q Consensus 138 L~lV~DLDeTLi~A~ 152 (788)
-+++|||||||+...
T Consensus 7 k~v~fDlDGTL~d~~ 21 (225)
T 3d6j_A 7 TVYLFDFDYTLADSS 21 (225)
T ss_dssp SEEEECCBTTTEECH
T ss_pred CEEEEeCCCCCCCCH
Confidence 368999999999765
No 155
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=71.15 E-value=2.1 Score=41.90 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=12.6
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhhc
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~ 170 (788)
.|+|||||||+..... -.+.-+++|+++...
T Consensus 7 li~~DlDGTLl~~~~~-i~~~~~~al~~l~~~ 37 (279)
T 3mpo_A 7 LIAIDIDGTLLNEKNE-LAQATIDAVQAAKAQ 37 (279)
T ss_dssp EEEECC------------CHHHHHHHHHHHHT
T ss_pred EEEEcCcCCCCCCCCc-CCHHHHHHHHHHHHC
Confidence 5899999999987532 223455666665443
No 156
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=71.00 E-value=1.6 Score=42.92 Aligned_cols=29 Identities=21% Similarity=0.236 Sum_probs=19.1
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhhc
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~ 170 (788)
.|+|||||||+ .. ..++.-+++|+++...
T Consensus 4 li~~DlDGTLl-~~--~~~~~~~~~l~~l~~~ 32 (249)
T 2zos_A 4 LIFLDIDKTLI-PG--YEPDPAKPIIEELKDM 32 (249)
T ss_dssp EEEECCSTTTC-TT--SCSGGGHHHHHHHHHT
T ss_pred EEEEeCCCCcc-CC--CCcHHHHHHHHHHHHC
Confidence 58899999999 43 3344455666665543
No 157
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=70.67 E-value=3 Score=40.57 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=22.3
Q ss_pred cceEEEEeCCcceeecccccch-HHHHHHHHHHhh
Q 003896 136 RCLAIVFDLDETLIVANTMKSF-EDRIEALRSWIA 169 (788)
Q Consensus 136 r~L~lV~DLDeTLi~A~t~~~~-e~ri~~l~~w~~ 169 (788)
++-.|++||||||+.... .+ +.-+++|+++..
T Consensus 5 ~~kli~~DlDGTLl~~~~--~i~~~~~~al~~l~~ 37 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPRQ--KITKEMDDFLQKLRQ 37 (246)
T ss_dssp CSEEEEEESBTTTBCTTS--CCCHHHHHHHHHHTT
T ss_pred CceEEEEECCCCcCCCCc--ccCHHHHHHHHHHHh
Confidence 345689999999998653 23 556677776653
No 158
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=70.66 E-value=1.4 Score=40.54 Aligned_cols=14 Identities=43% Similarity=0.731 Sum_probs=12.6
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+++|||||||+...
T Consensus 6 ~iifDlDGTL~d~~ 19 (209)
T 2hdo_A 6 ALMFDIDGTLTNSQ 19 (209)
T ss_dssp EEEECSBTTTEECH
T ss_pred EEEEcCCCCCcCCH
Confidence 68999999999875
No 159
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=70.44 E-value=2.9 Score=40.41 Aligned_cols=31 Identities=35% Similarity=0.430 Sum_probs=20.8
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhhc
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~ 170 (788)
.++|||||||+..... -.+.-+++|+++...
T Consensus 5 li~~DlDGTLl~~~~~-i~~~~~~al~~l~~~ 35 (231)
T 1wr8_A 5 AISIDIDGTITYPNRM-IHEKALEAIRRAESL 35 (231)
T ss_dssp EEEEESTTTTBCTTSC-BCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCCCCCc-CCHHHHHHHHHHHHC
Confidence 5899999999986532 124456677666543
No 160
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=70.30 E-value=2.8 Score=41.61 Aligned_cols=32 Identities=28% Similarity=0.292 Sum_probs=21.4
Q ss_pred eEEEEeCCcceeecccccchHHHHHHHHHHhhc
Q 003896 138 LAIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~ 170 (788)
-.|+|||||||+..... --+.-+++|+++...
T Consensus 22 kli~~DlDGTLl~~~~~-i~~~~~~al~~l~~~ 53 (285)
T 3pgv_A 22 QVVASDLDGTLLSPDHF-LTPYAKETLKLLTAR 53 (285)
T ss_dssp CEEEEECCCCCSCTTSC-CCHHHHHHHHHHHTT
T ss_pred eEEEEeCcCCCCCCCCc-CCHHHHHHHHHHHHC
Confidence 46899999999986532 223456677766544
No 161
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=70.05 E-value=1.2 Score=40.77 Aligned_cols=78 Identities=9% Similarity=0.104 Sum_probs=45.8
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g 330 (788)
++.|+..++.+.|+ ...+.+.|+|++ ..+..+++.++-. .+| +.+++.+. +..| -+..+...-
T Consensus 91 ~~~~~~~~~l~~l~---~~g~~~~i~t~~--~~~~~~l~~~~l~-~~f------~~~~~~~~~~~~Kp~~~~~~~~~~~l 158 (221)
T 2wf7_A 91 DVYPGILQLLKDLR---SNKIKIALASAS--KNGPFLLERMNLT-GYF------DAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp GBCTTHHHHHHHHH---HTTCEEEECCCC--TTHHHHHHHTTCG-GGC------SEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHH---HCCCeEEEEcCc--HHHHHHHHHcChH-HHc------ceEeccccCCCCCCChHHHHHHHHHc
Confidence 35689666555554 345999999998 5667777766432 122 34444322 2122 244444332
Q ss_pred CCCCCeEEEEeCCcc
Q 003896 331 LCHPKMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~~~VVIIDDR~d 345 (788)
+.+++.++.|+|+..
T Consensus 159 gi~~~~~i~iGD~~n 173 (221)
T 2wf7_A 159 GVAPSESIGLEDSQA 173 (221)
T ss_dssp TCCGGGEEEEESSHH
T ss_pred CCChhHeEEEeCCHH
Confidence 357889999999853
No 162
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=70.04 E-value=1.4 Score=40.30 Aligned_cols=14 Identities=43% Similarity=0.688 Sum_probs=12.4
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+|+|||||||+...
T Consensus 11 ~i~fDlDGTL~~~~ 24 (226)
T 1te2_A 11 AAIFDMDGLLIDSE 24 (226)
T ss_dssp EEEECCBTTTBCCH
T ss_pred EEEECCCCCcCcCH
Confidence 68999999999765
No 163
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=69.94 E-value=1.5 Score=41.11 Aligned_cols=14 Identities=57% Similarity=0.828 Sum_probs=12.6
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+|+|||||||+...
T Consensus 6 ~viFDlDGTL~d~~ 19 (210)
T 2ah5_A 6 AIFFDLDGTLVDSS 19 (210)
T ss_dssp EEEECSBTTTEECH
T ss_pred EEEEcCCCcCccCH
Confidence 78999999999865
No 164
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=69.76 E-value=2.9 Score=40.59 Aligned_cols=31 Identities=13% Similarity=0.237 Sum_probs=22.4
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhhcC
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~ 171 (788)
.|+|||||||+.... .+..-+++|+......
T Consensus 10 li~~DlDGTLl~~~~--~~~~~~~ai~~l~~~G 40 (268)
T 3qgm_A 10 GYIIDIDGVIGKSVT--PIPEGVEGVKKLKELG 40 (268)
T ss_dssp EEEEECBTTTEETTE--ECHHHHHHHHHHHHTT
T ss_pred EEEEcCcCcEECCCE--eCcCHHHHHHHHHHcC
Confidence 689999999998765 3455677776655443
No 165
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=69.58 E-value=2.6 Score=41.30 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=22.9
Q ss_pred eEEEEeCCcceeecccccchHHHHHHHHHHhhcC
Q 003896 138 LAIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~ 171 (788)
=.|+|||||||+.... .++.-+++|++.....
T Consensus 6 kli~~DlDGTLl~~~~--~i~~~~eal~~l~~~G 37 (264)
T 3epr_A 6 KGYLIDLDGTIYKGKS--RIPAGERFIERLQEKG 37 (264)
T ss_dssp CEEEECCBTTTEETTE--ECHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCceEeCCE--ECcCHHHHHHHHHHCC
Confidence 3689999999999764 4566667776655443
No 166
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=69.36 E-value=1.7 Score=40.31 Aligned_cols=15 Identities=27% Similarity=0.545 Sum_probs=13.0
Q ss_pred EEEEeCCcceeeccc
Q 003896 139 AIVFDLDETLIVANT 153 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t 153 (788)
+|+|||||||+....
T Consensus 5 ~i~fDlDGTLl~~~~ 19 (250)
T 2c4n_A 5 NVICDIDGVLMHDNV 19 (250)
T ss_dssp EEEEECBTTTEETTE
T ss_pred EEEEcCcceEEeCCE
Confidence 689999999998754
No 167
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=69.18 E-value=2.2 Score=41.86 Aligned_cols=27 Identities=30% Similarity=0.391 Sum_probs=17.8
Q ss_pred eEEEEeCCcceeecccccchHHHHHHHHH
Q 003896 138 LAIVFDLDETLIVANTMKSFEDRIEALRS 166 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~ 166 (788)
..|++||||||+... ..++..+++|++
T Consensus 4 ~li~~DlDGTLl~~~--~~~~~~~~~l~~ 30 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ--QALEHLQEYLGD 30 (244)
T ss_dssp EEEEECTBTTTBSCH--HHHHHHHHHHHT
T ss_pred eEEEEeCCCCCcCCH--HHHHHHHHHHHH
Confidence 378999999999865 334444444433
No 168
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=69.07 E-value=2.9 Score=41.25 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=20.3
Q ss_pred EEEEeCCcceeecccccchHH-H-HHHHHHHhhc
Q 003896 139 AIVFDLDETLIVANTMKSFED-R-IEALRSWIAR 170 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~-r-i~~l~~w~~~ 170 (788)
.|+|||||||+.... .+-+ . +++|+++...
T Consensus 5 li~~DlDGTLl~~~~--~i~~~~~~~al~~l~~~ 36 (271)
T 1rlm_A 5 VIVTDMDGTFLNDAK--TYNQPRFMAQYQELKKR 36 (271)
T ss_dssp EEEECCCCCCSCTTS--CCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCC--cCCHHHHHHHHHHHHHC
Confidence 589999999998653 2333 2 5677666543
No 169
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=68.84 E-value=1.6 Score=41.65 Aligned_cols=14 Identities=36% Similarity=0.710 Sum_probs=12.5
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+|+|||||||+...
T Consensus 6 ~viFDlDGTL~ds~ 19 (240)
T 2hi0_A 6 AAIFDMDGTILDTS 19 (240)
T ss_dssp EEEECSBTTTEECH
T ss_pred EEEEecCCCCccCH
Confidence 68999999999865
No 170
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=68.20 E-value=1.6 Score=40.34 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=49.0
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCc--c----cHhhhcc
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSR--K----SLLNVFQ 328 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~--K----sL~rLf~ 328 (788)
++.|+ +.++|+ .+.. .++|.|++.+.++..+++.++-. .+|. +.+++.+. +.. | -+..+..
T Consensus 87 ~~~~~---~~~~l~-~l~~--~~~i~s~~~~~~~~~~l~~~~l~-~~~~-----~~~~~~~~~~~~~~kpk~~~~~~~~~ 154 (229)
T 2fdr_A 87 KIIDG---VKFALS-RLTT--PRCICSNSSSHRLDMMLTKVGLK-PYFA-----PHIYSAKDLGADRVKPKPDIFLHGAA 154 (229)
T ss_dssp CBCTT---HHHHHH-HCCS--CEEEEESSCHHHHHHHHHHTTCG-GGTT-----TCEEEHHHHCTTCCTTSSHHHHHHHH
T ss_pred ccCcC---HHHHHH-HhCC--CEEEEECCChhHHHHHHHhCChH-Hhcc-----ceEEeccccccCCCCcCHHHHHHHHH
Confidence 45688 666776 4443 89999999999999999887533 2342 34554422 111 2 2333333
Q ss_pred cCCCCCCeEEEEeCCcc
Q 003896 329 RGLCHPKMAMVIDDRCK 345 (788)
Q Consensus 329 ~g~~d~~~VVIIDDR~d 345 (788)
.-+++++.++.|+|+..
T Consensus 155 ~l~~~~~~~i~iGD~~~ 171 (229)
T 2fdr_A 155 QFGVSPDRVVVVEDSVH 171 (229)
T ss_dssp HHTCCGGGEEEEESSHH
T ss_pred HcCCChhHeEEEcCCHH
Confidence 22257888999999864
No 171
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=68.15 E-value=1.6 Score=41.71 Aligned_cols=14 Identities=36% Similarity=0.437 Sum_probs=12.5
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+|+|||||||+...
T Consensus 15 ~iifDlDGTL~d~~ 28 (251)
T 2pke_A 15 LVGFDGDDTLWKSE 28 (251)
T ss_dssp EEEECCBTTTBCCH
T ss_pred EEEEeCCCCCccCc
Confidence 79999999999865
No 172
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=67.99 E-value=1.6 Score=39.90 Aligned_cols=78 Identities=19% Similarity=0.175 Sum_probs=47.2
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC-CCcc----cHhhhcccCC
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS-GSRK----SLLNVFQRGL 331 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres-g~~K----sL~rLf~~g~ 331 (788)
+.|++.++.++|+ ... .++|.|++.+.++..+++.++-. .+| +.+++.+. +..| -+..++...+
T Consensus 87 ~~~~~~~~l~~l~---~~g-~~~i~s~~~~~~~~~~l~~~~~~-~~f------~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 155 (200)
T 3cnh_A 87 PRPEVLALARDLG---QRY-RMYSLNNEGRDLNEYRIRTFGLG-EFL------LAFFTSSALGVMKPNPAMYRLGLTLAQ 155 (200)
T ss_dssp BCHHHHHHHHHHT---TTS-EEEEEECCCHHHHHHHHHHHTGG-GTC------SCEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred cCccHHHHHHHHH---HcC-CEEEEeCCcHHHHHHHHHhCCHH-Hhc------ceEEeecccCCCCCCHHHHHHHHHHcC
Confidence 5688555555553 234 99999999999999999877522 123 45555422 2212 1222222112
Q ss_pred CCCCeEEEEeCCcc
Q 003896 332 CHPKMAMVIDDRCK 345 (788)
Q Consensus 332 ~d~~~VVIIDDR~d 345 (788)
++++.++.|+|+..
T Consensus 156 ~~~~~~~~vgD~~~ 169 (200)
T 3cnh_A 156 VRPEEAVMVDDRLQ 169 (200)
T ss_dssp CCGGGEEEEESCHH
T ss_pred CCHHHeEEeCCCHH
Confidence 46788999999864
No 173
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=67.97 E-value=1.6 Score=40.77 Aligned_cols=15 Identities=33% Similarity=0.481 Sum_probs=13.0
Q ss_pred eEEEEeCCcceeecc
Q 003896 138 LAIVFDLDETLIVAN 152 (788)
Q Consensus 138 L~lV~DLDeTLi~A~ 152 (788)
=+|+|||||||+...
T Consensus 20 k~i~fDlDGTL~d~~ 34 (237)
T 4ex6_A 20 RGVILDLDGTLADTP 34 (237)
T ss_dssp EEEEECSBTTTBCCH
T ss_pred CEEEEcCCCCCcCCH
Confidence 478999999999865
No 174
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=67.49 E-value=1.6 Score=40.17 Aligned_cols=14 Identities=36% Similarity=0.480 Sum_probs=12.2
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+|+|||||||+...
T Consensus 6 ~i~fDlDGTL~d~~ 19 (235)
T 2om6_A 6 LVTFDVWNTLLDLN 19 (235)
T ss_dssp EEEECCBTTTBCHH
T ss_pred EEEEeCCCCCCCcc
Confidence 68999999999854
No 175
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=67.48 E-value=1.8 Score=41.64 Aligned_cols=14 Identities=50% Similarity=0.586 Sum_probs=12.5
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+|+|||||||+...
T Consensus 25 ~iiFDlDGTL~d~~ 38 (243)
T 2hsz_A 25 LIGFDLDGTLVNSL 38 (243)
T ss_dssp EEEECSBTTTEECH
T ss_pred EEEEcCCCcCCCCH
Confidence 68999999999864
No 176
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=67.39 E-value=2.3 Score=41.23 Aligned_cols=30 Identities=17% Similarity=0.419 Sum_probs=20.1
Q ss_pred cceEEEEeCCcceeecccccchHHHHHHHHHH
Q 003896 136 RCLAIVFDLDETLIVANTMKSFEDRIEALRSW 167 (788)
Q Consensus 136 r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w 167 (788)
+.-+++|||||||+..... .+.-+++++..
T Consensus 16 ~~~~v~~DlDGTLl~~~~~--~~~~~~~l~~l 45 (271)
T 1vjr_A 16 KIELFILDMDGTFYLDDSL--LPGSLEFLETL 45 (271)
T ss_dssp GCCEEEECCBTTTEETTEE--CTTHHHHHHHH
T ss_pred CCCEEEEcCcCcEEeCCEE--CcCHHHHHHHH
Confidence 3457999999999988542 34445555543
No 177
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=67.00 E-value=1.6 Score=41.31 Aligned_cols=15 Identities=47% Similarity=0.791 Sum_probs=12.9
Q ss_pred EEEEeCCcceeeccc
Q 003896 139 AIVFDLDETLIVANT 153 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t 153 (788)
+|+|||||||+....
T Consensus 4 ~iiFDlDGTL~d~~~ 18 (241)
T 2hoq_A 4 VIFFDLDDTLVDTSK 18 (241)
T ss_dssp EEEECSBTTTBCHHH
T ss_pred EEEEcCCCCCCCChh
Confidence 689999999998753
No 178
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=66.90 E-value=3.2 Score=41.35 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=22.0
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhhcC
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~ 171 (788)
.|+|||||||+..... --+..+++|+++....
T Consensus 7 li~~DlDGTLl~~~~~-i~~~~~~aL~~l~~~G 38 (282)
T 1rkq_A 7 LIAIDMDGTLLLPDHT-ISPAVKNAIAAARARG 38 (282)
T ss_dssp EEEECCCCCCSCTTSC-CCHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCCCCCCCc-CCHHHHHHHHHHHHCC
Confidence 5899999999986532 1244567777766544
No 179
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=66.07 E-value=3.6 Score=39.80 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=19.4
Q ss_pred eEEEEeCCcceeecccccchHHHHHHHHHHh
Q 003896 138 LAIVFDLDETLIVANTMKSFEDRIEALRSWI 168 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~ 168 (788)
-+++|||||||+.... .++.-++++..+.
T Consensus 6 k~v~fDlDGTL~~~~~--~~~~~~~~l~~l~ 34 (264)
T 1yv9_A 6 QGYLIDLDGTIYLGKE--PIPAGKRFVERLQ 34 (264)
T ss_dssp CEEEECCBTTTEETTE--ECHHHHHHHHHHH
T ss_pred CEEEEeCCCeEEeCCE--ECcCHHHHHHHHH
Confidence 3699999999998653 3544445555543
No 180
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=65.91 E-value=5 Score=36.57 Aligned_cols=14 Identities=21% Similarity=0.539 Sum_probs=12.6
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+++|||||||+...
T Consensus 6 ~viFDlDGTL~d~~ 19 (200)
T 3cnh_A 6 ALFWDIGGVLLTNG 19 (200)
T ss_dssp EEEECCBTTTBCCS
T ss_pred EEEEeCCCeeECCC
Confidence 68999999999865
No 181
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=64.76 E-value=2.2 Score=40.36 Aligned_cols=15 Identities=53% Similarity=0.755 Sum_probs=12.9
Q ss_pred EEEEeCCcceeeccc
Q 003896 139 AIVFDLDETLIVANT 153 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t 153 (788)
+++|||||||+....
T Consensus 5 ~viFDlDGTL~d~~~ 19 (222)
T 2nyv_A 5 VILFDLDGTLIDSAK 19 (222)
T ss_dssp EEEECTBTTTEECHH
T ss_pred EEEECCCCcCCCCHH
Confidence 689999999998653
No 182
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=64.35 E-value=6.3 Score=36.63 Aligned_cols=14 Identities=50% Similarity=0.420 Sum_probs=11.7
Q ss_pred eEEEEeCCcceeec
Q 003896 138 LAIVFDLDETLIVA 151 (788)
Q Consensus 138 L~lV~DLDeTLi~A 151 (788)
-+|+|||||||+..
T Consensus 28 k~vifDlDGTL~~~ 41 (187)
T 2wm8_A 28 KLAVFDLDYTLWPF 41 (187)
T ss_dssp SEEEECSBTTTBSS
T ss_pred CEEEEcCCCCcchH
Confidence 47999999999743
No 183
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=64.30 E-value=3.2 Score=40.27 Aligned_cols=36 Identities=11% Similarity=0.098 Sum_probs=25.5
Q ss_pred cCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhh
Q 003896 258 RPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLL 296 (788)
Q Consensus 258 RPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLL 296 (788)
.|+..++++.|+ .+-|.++|.|++.+.++..+++.|
T Consensus 90 ~~~~~e~l~~L~---~~G~~l~ivTn~~~~~~~~~l~~l 125 (211)
T 2b82_A 90 KEVARQLIDMHV---RRGDAIFFVTGRSPTKTETVSKTL 125 (211)
T ss_dssp CHHHHHHHHHHH---HHTCEEEEEECSCCCSSCCHHHHH
T ss_pred cHHHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHH
Confidence 467555555554 356999999999988777666654
No 184
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=64.28 E-value=2.9 Score=39.52 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=20.9
Q ss_pred EEEEeCCcceeecccc---cchHHHHHHHHHHhhcC
Q 003896 139 AIVFDLDETLIVANTM---KSFEDRIEALRSWIARE 171 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~---~~~e~ri~~l~~w~~~~ 171 (788)
.|+|||||||+..... ...+.-+++|+.+....
T Consensus 5 ~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G 40 (142)
T 2obb_A 5 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEK 40 (142)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTT
T ss_pred EEEEECcCCCCCCCCccccccCHHHHHHHHHHHHCC
Confidence 6899999999985421 11234466776665443
No 185
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=63.98 E-value=4.5 Score=39.97 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=21.1
Q ss_pred eEEEEeCCcceeecccccch-HHHHHHHHHHh
Q 003896 138 LAIVFDLDETLIVANTMKSF-EDRIEALRSWI 168 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~-e~ri~~l~~w~ 168 (788)
-.|++||||||+.... .+ +.-+++|+++.
T Consensus 14 kli~~DlDGTLl~~~~--~is~~~~~al~~l~ 43 (262)
T 2fue_A 14 VLCLFDVDGTLTPARQ--KIDPEVAAFLQKLR 43 (262)
T ss_dssp EEEEEESBTTTBSTTS--CCCHHHHHHHHHHT
T ss_pred EEEEEeCccCCCCCCC--cCCHHHHHHHHHHH
Confidence 4689999999998653 23 55677777764
No 186
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=63.00 E-value=3.8 Score=39.18 Aligned_cols=81 Identities=11% Similarity=-0.015 Sum_probs=47.6
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecC---C--CcccHhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKS---G--SRKSLLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisres---g--~~KsL~rLf~~g 330 (788)
++.|++.++.++|+ ...+.+.|+|++.+.++..+++.++-.+ +|. +.+++.+. + ....+..+...-
T Consensus 103 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~-----~~~~~~~~~~~~kp~~~~~~~~~~~l 173 (267)
T 1swv_A 103 SPINGVKEVIASLR---ERGIKIGSTTGYTREMMDIVAKEAALQG-YKP-----DFLVTPDDVPAGRPYPWMCYKNAMEL 173 (267)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCC-----SCCBCGGGSSCCTTSSHHHHHHHHHH
T ss_pred ccCccHHHHHHHHH---HcCCeEEEEcCCCHHHHHHHHHHcCCcc-cCh-----HheecCCccCCCCCCHHHHHHHHHHh
Confidence 35689666666665 3568999999999999999888764322 221 22333221 1 111233333211
Q ss_pred CCCC-CeEEEEeCCcc
Q 003896 331 LCHP-KMAMVIDDRCK 345 (788)
Q Consensus 331 ~~d~-~~VVIIDDR~d 345 (788)
++++ +.++.|+|+..
T Consensus 174 gi~~~~~~i~iGD~~n 189 (267)
T 1swv_A 174 GVYPMNHMIKVGDTVS 189 (267)
T ss_dssp TCCSGGGEEEEESSHH
T ss_pred CCCCCcCEEEEeCCHH
Confidence 2466 78999999863
No 187
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=62.51 E-value=2.2 Score=39.40 Aligned_cols=16 Identities=31% Similarity=0.534 Sum_probs=13.3
Q ss_pred eEEEEeCCcceeeccc
Q 003896 138 LAIVFDLDETLIVANT 153 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t 153 (788)
-+|+|||||||+....
T Consensus 6 k~i~fDlDGTL~d~~~ 21 (240)
T 3qnm_A 6 KNLFFDLDDTIWAFSR 21 (240)
T ss_dssp SEEEECCBTTTBCHHH
T ss_pred eEEEEcCCCCCcCchh
Confidence 3689999999998763
No 188
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=61.99 E-value=2.3 Score=41.86 Aligned_cols=18 Identities=50% Similarity=0.671 Sum_probs=14.3
Q ss_pred cceEEEEeCCcceeeccc
Q 003896 136 RCLAIVFDLDETLIVANT 153 (788)
Q Consensus 136 r~L~lV~DLDeTLi~A~t 153 (788)
+.-+|+|||||||+....
T Consensus 17 ~~k~viFDlDGTLvds~~ 34 (260)
T 2gfh_A 17 RVRAVFFDLDNTLIDTAG 34 (260)
T ss_dssp CCCEEEECCBTTTBCHHH
T ss_pred cceEEEEcCCCCCCCCHH
Confidence 334799999999998653
No 189
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=61.98 E-value=5.3 Score=39.73 Aligned_cols=30 Identities=30% Similarity=0.261 Sum_probs=19.6
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHhh
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWIA 169 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~ 169 (788)
.|+|||||||+.....- -+.-+++++++..
T Consensus 6 li~~DlDGTLl~~~~~i-~~~~~~al~~l~~ 35 (288)
T 1nrw_A 6 LIAIDLDGTLLNSKHQV-SLENENALRQAQR 35 (288)
T ss_dssp EEEEECCCCCSCTTSCC-CHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCcc-CHHHHHHHHHHHH
Confidence 58999999999875422 2344555655543
No 190
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=61.46 E-value=4.7 Score=41.04 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=21.4
Q ss_pred EEEEeCCcceeec-ccccchHHHHHHHHHHhhcC
Q 003896 139 AIVFDLDETLIVA-NTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 139 ~lV~DLDeTLi~A-~t~~~~e~ri~~l~~w~~~~ 171 (788)
.|+|||||||+.. ... --+.-+++|+++....
T Consensus 29 li~~DlDGTLl~~~~~~-is~~~~~al~~l~~~G 61 (301)
T 2b30_A 29 LLLIDFDGTLFVDKDIK-VPSENIDAIKEAIEKG 61 (301)
T ss_dssp EEEEETBTTTBCCTTTC-SCHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCcCCCCCc-cCHHHHHHHHHHHHCC
Confidence 6899999999986 321 1244567777666443
No 191
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=60.94 E-value=3.1 Score=41.52 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=22.0
Q ss_pred ceEEEEeCCcceeecccccchHHHHHHHHHHhhcC
Q 003896 137 CLAIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 137 ~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~ 171 (788)
.-.|++||||||+..... ..+..+++|+++....
T Consensus 9 ~~li~~DlDGTLl~~~~~-~~~~~~~~l~~l~~~G 42 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDSHSY-DWQPAAPWLTRLREAN 42 (275)
T ss_dssp CEEEEEECTTTTSCSSCC-SCCTTHHHHHHHHHTT
T ss_pred ceEEEEeCCCCCCCCCCc-CCHHHHHHHHHHHHCC
Confidence 356899999999985321 2234566776665443
No 192
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=60.78 E-value=3.9 Score=38.90 Aligned_cols=84 Identities=18% Similarity=0.214 Sum_probs=39.7
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccc---cccccCceEeecCCCcccHhhhcccCCCCCCeEEEE
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIG---SKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVI 340 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~---~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVII 340 (788)
+.++|+ .+.+.+.+ |+|+..+.++...+..++-. .+|. .-.-.+.+...+. ...-+..+...-+++++.+++|
T Consensus 127 ~~~~l~-~l~~~~~~-i~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Kp-~~~~~~~~~~~lgi~~~~~~~i 202 (259)
T 2ho4_A 127 LNQAFR-LLLDGAPL-IAIHKARYYKRKDGLALGPG-PFVTALEYATDTKAMVVGKP-EKTFFLEALRDADCAPEEAVMI 202 (259)
T ss_dssp HHHHHH-HHHTTCCE-EESCCCSEEEETTEEEECSH-HHHHHHHHHHTCCCEECSTT-SHHHHHHHGGGGTCCGGGEEEE
T ss_pred HHHHHH-HHHCCCEE-EEECCCCcCcccCCcccCCc-HHHHHHHHHhCCCceEecCC-CHHHHHHHHHHcCCChHHEEEE
Confidence 455554 33355677 99999877665443333221 1221 0000011111111 1112333333223578899999
Q ss_pred eCCc--cccccCC
Q 003896 341 DDRC--KVWEDKD 351 (788)
Q Consensus 341 DDR~--dVW~~~~ 351 (788)
+|+. |+-..+.
T Consensus 203 GD~~~~Di~~a~~ 215 (259)
T 2ho4_A 203 GDDCRDDVDGAQN 215 (259)
T ss_dssp ESCTTTTHHHHHH
T ss_pred CCCcHHHHHHHHH
Confidence 9985 6665443
No 193
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=60.15 E-value=11 Score=37.68 Aligned_cols=73 Identities=15% Similarity=0.108 Sum_probs=47.9
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCC
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHP 334 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~ 334 (788)
.+++|+..++.++|+ ..-+.+.|.|++.+.++..+++.+.-+ .+|. .++ ..+..+-++++. ..
T Consensus 162 ~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~------~i~--~~~K~~~~~~l~----~~- 224 (287)
T 3a1c_A 162 DTLKESAKPAVQELK---RMGIKVGMITGDNWRSAEAISRELNLD-LVIA------EVL--PHQKSEEVKKLQ----AK- 224 (287)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHTCS-EEEC------SCC--TTCHHHHHHHHT----TT-
T ss_pred cccchhHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHHhCCc-eeee------ecC--hHHHHHHHHHHh----cC-
Confidence 368999777666665 356899999999999999999987643 2333 222 111123344332 24
Q ss_pred CeEEEEeCCc
Q 003896 335 KMAMVIDDRC 344 (788)
Q Consensus 335 ~~VVIIDDR~ 344 (788)
+.+++|.|+.
T Consensus 225 ~~~~~vGDs~ 234 (287)
T 3a1c_A 225 EVVAFVGDGI 234 (287)
T ss_dssp CCEEEEECTT
T ss_pred CeEEEEECCH
Confidence 7788888874
No 194
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=60.07 E-value=5.3 Score=36.82 Aligned_cols=15 Identities=33% Similarity=0.569 Sum_probs=12.9
Q ss_pred EEEEeCCcceeeccc
Q 003896 139 AIVFDLDETLIVANT 153 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t 153 (788)
+|+|||||||+....
T Consensus 6 ~i~fDlDGTL~d~~~ 20 (229)
T 2fdr_A 6 LIIFDCDGVLVDSEI 20 (229)
T ss_dssp EEEECSBTTTBCCHH
T ss_pred EEEEcCCCCcCccHH
Confidence 689999999998753
No 195
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=60.00 E-value=5.3 Score=39.66 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=20.6
Q ss_pred eEEEEeCCcceeecccccchHHHHHHHHHHhhc
Q 003896 138 LAIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170 (788)
Q Consensus 138 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~ 170 (788)
-.|+|||||||+.....-+ +.-+++|+++...
T Consensus 5 kli~~DlDGTLl~~~~~i~-~~~~~~l~~l~~~ 36 (246)
T 3f9r_A 5 VLLLFDVDGTLTPPRLCQT-DEMRALIKRARGA 36 (246)
T ss_dssp EEEEECSBTTTBSTTSCCC-HHHHHHHHHHHHT
T ss_pred eEEEEeCcCCcCCCCCccC-HHHHHHHHHHHHC
Confidence 3689999999998753221 3445566555543
No 196
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=59.98 E-value=7.7 Score=36.95 Aligned_cols=38 Identities=26% Similarity=0.171 Sum_probs=28.2
Q ss_pred ecCChHHHHHHHHHhccccEEEEEEeCCch---------------HHHHHHHHhhC
Q 003896 257 LRPAWEDLRSYLIAKGRKRFEVYVCTMAER---------------DYALEMWRLLD 297 (788)
Q Consensus 257 LRPgweeLreFL~ak~sk~FElyVyTmgtR---------------~YA~~IlrLLD 297 (788)
+.|+..++.+.|+ .+-|.++|.|++.+ .++..+++.+.
T Consensus 57 ~~~g~~e~L~~L~---~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 109 (218)
T 2o2x_A 57 LRPQMLPAIATAN---RAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEG 109 (218)
T ss_dssp BCGGGHHHHHHHH---HHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTT
T ss_pred ECcCHHHHHHHHH---HCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcC
Confidence 3488666666664 35699999999998 68888887654
No 197
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=58.97 E-value=9.2 Score=36.52 Aligned_cols=15 Identities=20% Similarity=0.282 Sum_probs=13.1
Q ss_pred EEEEeCCcceeeccc
Q 003896 139 AIVFDLDETLIVANT 153 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t 153 (788)
+|+|||||||+....
T Consensus 8 ~i~fDlDGTLld~~~ 22 (267)
T 1swv_A 8 AVIFAWAGTTVDYGC 22 (267)
T ss_dssp EEEECSBTTTBSTTC
T ss_pred EEEEecCCCEEeCCC
Confidence 689999999998654
No 198
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=58.73 E-value=9.5 Score=36.44 Aligned_cols=85 Identities=6% Similarity=-0.023 Sum_probs=47.5
Q ss_pred EecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCC-Cccc----HhhhcccC
Q 003896 256 RLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSG-SRKS----LLNVFQRG 330 (788)
Q Consensus 256 KLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg-~~Ks----L~rLf~~g 330 (788)
++.||+.+++++|+ .+-|.+.|.|+..+..+..+.+ .+| +.++|.++. ..|- +...+..-
T Consensus 36 ~~~pg~~e~L~~L~---~~g~~~~i~T~~~~~~~~~~~~------~~~------d~v~~~~~~~~~KP~p~~~~~a~~~l 100 (196)
T 2oda_A 36 QLTPGAQNALKALR---DQGMPCAWIDELPEALSTPLAA------PVN------DWMIAAPRPTAGWPQPDACWMALMAL 100 (196)
T ss_dssp SBCTTHHHHHHHHH---HHTCCEEEECCSCHHHHHHHHT------TTT------TTCEECCCCSSCTTSTHHHHHHHHHT
T ss_pred CcCcCHHHHHHHHH---HCCCEEEEEcCChHHHHHHhcC------ccC------CEEEECCcCCCCCCChHHHHHHHHHc
Confidence 34599777777775 3568899999999988854443 223 456665432 2221 12222111
Q ss_pred CCCC-CeEEEEeCCcc-ccccCCCCCeE
Q 003896 331 LCHP-KMAMVIDDRCK-VWEDKDQPRVH 356 (788)
Q Consensus 331 ~~d~-~~VVIIDDR~d-VW~~~~~NlI~ 356 (788)
+..+ +.+|+|.|+.. +-..+.. ++.
T Consensus 101 ~~~~~~~~v~VGDs~~Di~aA~~a-G~~ 127 (196)
T 2oda_A 101 NVSQLEGCVLISGDPRLLQSGLNA-GLW 127 (196)
T ss_dssp TCSCSTTCEEEESCHHHHHHHHHH-TCE
T ss_pred CCCCCccEEEEeCCHHHHHHHHHC-CCE
Confidence 1333 67888888753 4444433 443
No 199
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=58.28 E-value=6.3 Score=38.54 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=20.1
Q ss_pred EEEEeCCcceeeccc---ccc-hHHHHHHHHHHhhcC
Q 003896 139 AIVFDLDETLIVANT---MKS-FEDRIEALRSWIARE 171 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t---~~~-~e~ri~~l~~w~~~~ 171 (788)
.|++||||||+.... ... -+.-+++|+++....
T Consensus 3 li~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g 39 (239)
T 1u02_A 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF 39 (239)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS
T ss_pred EEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC
Confidence 589999999997421 111 244556666655444
No 200
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=57.99 E-value=6.7 Score=38.66 Aligned_cols=26 Identities=35% Similarity=0.506 Sum_probs=18.6
Q ss_pred EEEEeCCcceeecccccch-HHHHHHHHH
Q 003896 139 AIVFDLDETLIVANTMKSF-EDRIEALRS 166 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~ 166 (788)
.|+|||||||+.... .+ +.-+++|++
T Consensus 4 li~~DlDGTLl~~~~--~i~~~~~~al~~ 30 (268)
T 1nf2_A 4 VFVFDLDGTLLNDNL--EISEKDRRNIEK 30 (268)
T ss_dssp EEEEECCCCCSCTTS--CCCHHHHHHHHH
T ss_pred EEEEeCCCcCCCCCC--ccCHHHHHHHHH
Confidence 589999999998643 23 345667777
No 201
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=54.24 E-value=9 Score=41.30 Aligned_cols=41 Identities=15% Similarity=0.107 Sum_probs=37.0
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCC
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDP 298 (788)
+|++|+..+|..+|+ +.-|++||+|.|.+..+..|++.|..
T Consensus 220 ir~~p~~~eLi~~L~---~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLE---ENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHH---HCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 578999999999998 68899999999999999999998753
No 202
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=54.22 E-value=3.7 Score=39.34 Aligned_cols=13 Identities=31% Similarity=0.493 Sum_probs=11.3
Q ss_pred eEEEEeCCcceee
Q 003896 138 LAIVFDLDETLIV 150 (788)
Q Consensus 138 L~lV~DLDeTLi~ 150 (788)
=+|+|||||||+.
T Consensus 7 kav~fDlDGTL~d 19 (196)
T 2oda_A 7 PALLFGLSGCLVD 19 (196)
T ss_dssp SCEEEETBTTTBC
T ss_pred CEEEEcCCCceEe
Confidence 3689999999986
No 203
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=53.92 E-value=15 Score=39.08 Aligned_cols=17 Identities=29% Similarity=0.567 Sum_probs=13.7
Q ss_pred cceEEEEeCCcceeecc
Q 003896 136 RCLAIVFDLDETLIVAN 152 (788)
Q Consensus 136 r~L~lV~DLDeTLi~A~ 152 (788)
+.-+++|||||||+...
T Consensus 12 ~~~~~l~D~DGvl~~g~ 28 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGK 28 (352)
T ss_dssp CCEEEEECCBTTTEETT
T ss_pred cCCEEEEECCCeeEcCC
Confidence 45789999999998754
No 204
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=52.11 E-value=12 Score=42.60 Aligned_cols=87 Identities=14% Similarity=0.074 Sum_probs=60.2
Q ss_pred CCCCceEEeeecCCCCCCCcchhhhhcccCceeeecCCCCCCCchhHHHHHHHhhcccccEEEEeC---CeeEEEEecCC
Q 003896 32 FPNNEIRIRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIG---DEEIHLVAMPS 108 (788)
Q Consensus 32 ~~~~~i~i~~~~~~~e~~~pl~~lh~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~e~ktaVv~~~---~~elhLva~~~ 108 (788)
+-..+|+|.+|-+.++ -+| .|.+....+-.+.+........++..|+..|.+.+|.||++.- ....+|||+-+
T Consensus 340 ~~~~~i~ilgFv~~~~-i~~---~~~~~~~~~l~P~~~~~~~s~~afsaL~~al~~~~kvaIar~v~r~~~~p~l~aL~P 415 (609)
T 1jey_A 340 FDDPGLMLMGFKPLVL-LKK---HHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVP 415 (609)
T ss_dssp CSCSEEEEEEEEEGGG-SCG---GGCCSCCEEEEECTTTEETHHHHHHHHHHHHHHTTEEEEEEEECSSSCCCEEEEEEE
T ss_pred cCCCceEEEeecchHh-Cch---hhccCCceEEecCCCCccchHHHHHHHHHHHHhcCcEEEEEEEecCCCCCEEEEEeC
Confidence 4578899999976542 333 3555554444433433334588999999999999999999983 44689998543
Q ss_pred CCC---------CCceEeeeecC
Q 003896 109 KQK---------KFPCFWCYSVS 122 (788)
Q Consensus 109 ~~~---------~~p~F~~~~~~ 122 (788)
... ..+|||...+|
T Consensus 416 ~~~~~d~~~~q~~~~gl~l~~Lp 438 (609)
T 1jey_A 416 QEEELDDQKIQVTPPGFQLVFLP 438 (609)
T ss_dssp ECCEECTTCCEEECSEEEEEECC
T ss_pred ccccccccCCcCCCCeeEEEecC
Confidence 322 34699999988
No 205
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=50.62 E-value=4.2 Score=40.64 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=50.5
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCC--------CCCccccccccCceEeecCCCcc-----
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP--------EGHLIGSKQLLDRVVCVKSGSRK----- 321 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDP--------dgklF~~r~l~~RIisresg~~K----- 321 (788)
.++.||+.++++.|+ .+-+.+.|.|+..+.++..+.+.|+- .|-.| +-+++.+++..|
T Consensus 187 ~~~~~g~~e~L~~L~---~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~kp~p~~ 257 (301)
T 1ltq_A 187 DVINPMVVELSKMYA---LMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL------VMQCQREQGDTRKDDVV 257 (301)
T ss_dssp CCBCHHHHHHHHHHH---HTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC------SEEEECCTTCCSCHHHH
T ss_pred cCCChHHHHHHHHHH---HCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc------hheeeccCCCCcHHHHH
Confidence 456799766666665 46699999999998887554443332 23223 345555443211
Q ss_pred ---cHhhhcccCCCCCCeEEEEeCCccccccCCCCCeE
Q 003896 322 ---SLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVH 356 (788)
Q Consensus 322 ---sL~rLf~~g~~d~~~VVIIDDR~dVW~~~~~NlI~ 356 (788)
-+.++.. .....+++|+|+..--....+.+|.
T Consensus 258 ~~~~~~~~~~---~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 258 KEEIFWKHIA---PHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp HHHHHHHHTT---TTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred HHHHHHHHhc---cccceEEEeCCcHHHHHHHHHcCCe
Confidence 1233321 1124567899997654333333443
No 206
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=50.14 E-value=6.7 Score=39.37 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=25.4
Q ss_pred HHhhhccceEEEEeCCcceeecccccchHHHHHHHHHHhhcC
Q 003896 130 LGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIARE 171 (788)
Q Consensus 130 ~~lL~~r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~~ 171 (788)
..++..-| +++|||||||+.... .++.-+++++.+....
T Consensus 15 ~~~~~~~k-~i~~D~DGTL~~~~~--~~~~~~~~l~~l~~~g 53 (306)
T 2oyc_A 15 RDVLGRAQ-GVLFDCDGVLWNGER--AVPGAPELLERLARAG 53 (306)
T ss_dssp HHHHHHCS-EEEECSBTTTEETTE--ECTTHHHHHHHHHHTT
T ss_pred HHHHhhCC-EEEECCCCcEecCCc--cCcCHHHHHHHHHHCC
Confidence 34454443 689999999998653 3555666676665443
No 207
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=49.40 E-value=20 Score=32.60 Aligned_cols=14 Identities=36% Similarity=0.631 Sum_probs=12.3
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+|+|||||||+...
T Consensus 4 ~i~fDlDGTL~d~~ 17 (221)
T 2wf7_A 4 AVLFDLDGVITDTA 17 (221)
T ss_dssp EEEECCBTTTBTHH
T ss_pred EEEECCCCcccCCh
Confidence 68999999999765
No 208
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=47.92 E-value=6.8 Score=38.60 Aligned_cols=37 Identities=19% Similarity=0.086 Sum_probs=24.1
Q ss_pred HhhhccceEEEEeCCcceeecccccchHHHHHHHHHHhhc
Q 003896 131 GMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAR 170 (788)
Q Consensus 131 ~lL~~r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~~~ 170 (788)
.++..- -+++|||||||+.... .++.-.++|+.+...
T Consensus 9 ~~~~~~-k~i~~D~DGtL~~~~~--~~~~~~~~l~~l~~~ 45 (284)
T 2hx1_A 9 SLLPKY-KCIFFDAFGVLKTYNG--LLPGIENTFDYLKAQ 45 (284)
T ss_dssp HHGGGC-SEEEECSBTTTEETTE--ECTTHHHHHHHHHHT
T ss_pred HHHhcC-CEEEEcCcCCcCcCCe--eChhHHHHHHHHHHC
Confidence 344433 3689999999998754 244555666666543
No 209
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=47.06 E-value=11 Score=32.15 Aligned_cols=11 Identities=18% Similarity=0.314 Sum_probs=9.7
Q ss_pred EEEEeCCccee
Q 003896 139 AIVFDLDETLI 149 (788)
Q Consensus 139 ~lV~DLDeTLi 149 (788)
+|+||+|+||.
T Consensus 4 ~i~~D~DgtL~ 14 (137)
T 2pr7_A 4 GLIVDYAGVLD 14 (137)
T ss_dssp EEEECSTTTTS
T ss_pred EEEEeccceec
Confidence 58999999993
No 210
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=46.29 E-value=8.7 Score=37.57 Aligned_cols=28 Identities=29% Similarity=0.366 Sum_probs=19.0
Q ss_pred EEEEeCCcceeecccccchHHHHHHHHHHh
Q 003896 139 AIVFDLDETLIVANTMKSFEDRIEALRSWI 168 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~w~ 168 (788)
+++|||||||+.... .++.-++++++..
T Consensus 3 ~i~~D~DGtL~~~~~--~~~~~~~~l~~l~ 30 (263)
T 1zjj_A 3 AIIFDMDGVLYRGNR--AIPGVRELIEFLK 30 (263)
T ss_dssp EEEEECBTTTEETTE--ECTTHHHHHHHHH
T ss_pred EEEEeCcCceEeCCE--eCccHHHHHHHHH
Confidence 689999999998653 2344455555543
No 211
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=45.59 E-value=7.4 Score=38.93 Aligned_cols=15 Identities=33% Similarity=0.512 Sum_probs=13.2
Q ss_pred EEEEeCCcceeeccc
Q 003896 139 AIVFDLDETLIVANT 153 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t 153 (788)
+|+||+||||+....
T Consensus 34 ~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 34 AVIFDKTGTLTKGKP 48 (287)
T ss_dssp EEEEECCCCCBCSCC
T ss_pred EEEEeCCCCCcCCCE
Confidence 799999999998754
No 212
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=45.29 E-value=8.4 Score=37.50 Aligned_cols=30 Identities=23% Similarity=0.279 Sum_probs=20.0
Q ss_pred EEEEeCCcceeecccccch-HHHHHHHHHHhhc
Q 003896 139 AIVFDLDETLIVANTMKSF-EDRIEALRSWIAR 170 (788)
Q Consensus 139 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~w~~~ 170 (788)
.|++||||||+.... .+ +.-+++|+++...
T Consensus 7 li~~DlDGTLl~~~~--~i~~~~~~~l~~l~~~ 37 (227)
T 1l6r_A 7 LAAIDVDGNLTDRDR--LISTKAIESIRSAEKK 37 (227)
T ss_dssp EEEEEHHHHSBCTTS--CBCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCcCCCC--cCCHHHHHHHHHHHHC
Confidence 588999999998642 23 3345666665543
No 213
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=45.20 E-value=12 Score=42.00 Aligned_cols=84 Identities=11% Similarity=0.051 Sum_probs=57.5
Q ss_pred CceEEeeecCCCCCCCcchhhhhcccCceeeecCCCCCCCchhHHHHHHHhhcccccEEEEeC---CeeEEEEec-CCCC
Q 003896 35 NEIRIRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIG---DEEIHLVAM-PSKQ 110 (788)
Q Consensus 35 ~~i~i~~~~~~~e~~~pl~~lh~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~e~ktaVv~~~---~~elhLva~-~~~~ 110 (788)
.+|+|.+|-+.+ ..+|. |.+.....-+..+........++..|+..|.+.+|.||++.- ...-+|||+ |...
T Consensus 338 ~~l~ilgFv~~~-~i~~~---~~~~~s~y~l~p~~~~~~s~~af~aL~~al~~~~kvaIar~v~r~~~~p~l~aL~P~~~ 413 (565)
T 1jey_B 338 KCFSVLGFCKSS-QVQRR---FFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDKRANPQVGVAFPHIK 413 (565)
T ss_dssp SEEEEEEEEEGG-GSCGG---GCEEEEEEEEEECTTCHHHHHHHHHHHHHHHHTTEEEEEEEESSSSSCCEEEEEEEEEC
T ss_pred CcEEEEeeccHH-HCCHh---hccCCceEEEeCCCCChhhHHHHHHHHHHHHHCCCEEEEEEEEcCCCCcEEEEEecccc
Confidence 889999995544 34442 333322133344444445688999999999999999999983 346789985 4333
Q ss_pred CCCceEeeeecC
Q 003896 111 KKFPCFWCYSVS 122 (788)
Q Consensus 111 ~~~p~F~~~~~~ 122 (788)
...+|||...+|
T Consensus 414 ~~~~gl~l~~Lp 425 (565)
T 1jey_B 414 HNYECLVYVQLP 425 (565)
T ss_dssp SSCEEEEEEECC
T ss_pred CCCCeEEEEccC
Confidence 346899999988
No 214
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=39.90 E-value=18 Score=32.87 Aligned_cols=14 Identities=21% Similarity=0.297 Sum_probs=11.8
Q ss_pred EEEEeCCcceeecc
Q 003896 139 AIVFDLDETLIVAN 152 (788)
Q Consensus 139 ~lV~DLDeTLi~A~ 152 (788)
+++||+|+||+...
T Consensus 3 ~v~~D~DGtL~~~~ 16 (179)
T 3l8h_A 3 LIILDRDGVVNQDS 16 (179)
T ss_dssp EEEECSBTTTBCCC
T ss_pred EEEEcCCCccccCC
Confidence 57899999999753
No 215
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=46.02 E-value=6.1 Score=39.39 Aligned_cols=75 Identities=12% Similarity=0.134 Sum_probs=47.7
Q ss_pred EEEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhCCCCCccccccccCceEeecCCCcccHhhhcccCCCC
Q 003896 254 LVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCH 333 (788)
Q Consensus 254 ~VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d 333 (788)
..++||+..++.+.|+ ..-|.++|.|++.+..+..+++.++-+ .+|. .++ .....+-++++- ..
T Consensus 134 ~~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~~gl~-~~f~------~~~--p~~k~~~~~~l~----~~ 197 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLK---NEGLKIIILSGDKEDKVKELSKELNIQ-EYYS------NLS--PEDKVRIIEKLK----QN 197 (263)
Confidence 3578999666666664 345899999999999999999987643 2333 222 111122233332 24
Q ss_pred CCeEEEEeCCc
Q 003896 334 PKMAMVIDDRC 344 (788)
Q Consensus 334 ~~~VVIIDDR~ 344 (788)
++.++.|.|..
T Consensus 198 ~~~~~~VGD~~ 208 (263)
T 2yj3_A 198 GNKVLMIGDGV 208 (263)
Confidence 56788888873
No 216
>2qvw_A GLP_546_48378_50642; dicer, RNAI,pseudo-merohedral twin, hydrolase; 3.00A {Giardia intestinalis} PDB: 2ffl_A
Probab=39.56 E-value=4.4 Score=47.78 Aligned_cols=42 Identities=7% Similarity=-0.133 Sum_probs=34.8
Q ss_pred CCCh-HHHHHHHHHhCCCCceEEEEeeeCCCceEEEEEEECCeEeEEEecCCHHHHH---------HHHHHHHHHHHHH
Q 003896 624 SYLS-IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQ---------QQAAENALHYLAE 692 (788)
Q Consensus 624 s~dy-KS~LQE~~QK~~~~peYelveesGH~~~FtveV~I~Gkk~G~G~GsSKKEAE---------Q~AAK~AL~~L~~ 692 (788)
..|| |+.||||+|++ .++.|+|.+.+.|| -.||+.||++|.+
T Consensus 446 ~~Dp~Kt~LqE~~q~~---------------------------~ia~~v~~~~~~ak~~~~~~~~~~~aa~~aL~~l~~ 497 (756)
T 2qvw_A 446 CPDAVTKASKRVCMGE---------------------------AGAHEFRSLVDYACEQGISVFCSSRVSTMFLERLRD 497 (756)
T ss_dssp CCHHHHHHHHHHHTSC---------------------------CCHHHHHHHHHHTTTTTCCCBSSSHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHhcc---------------------------chhhhhhhhhhHHhhhccccchhhHHHHHHHHhhcc
Confidence 3578 99999999855 35678899999999 6899999988864
No 217
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=33.69 E-value=25 Score=32.71 Aligned_cols=13 Identities=31% Similarity=0.616 Sum_probs=11.4
Q ss_pred EEEEeCCcceeec
Q 003896 139 AIVFDLDETLIVA 151 (788)
Q Consensus 139 ~lV~DLDeTLi~A 151 (788)
+|+||+|+||+..
T Consensus 5 ~vifD~DgtL~~~ 17 (189)
T 3ib6_A 5 HVIWDMGETLNTV 17 (189)
T ss_dssp EEEECTBTTTBCC
T ss_pred EEEEcCCCceeec
Confidence 6899999999873
No 218
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=31.43 E-value=24 Score=35.38 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=34.6
Q ss_pred EEecCChHHHHHHHHHhccccEEEEEEeCCchHHHHHHHHhhC
Q 003896 255 VRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLD 297 (788)
Q Consensus 255 VKLRPgweeLreFL~ak~sk~FElyVyTmgtR~YA~~IlrLLD 297 (788)
+++||+..++.++|+ ..-+.++|.|.|....|..|++.+.
T Consensus 140 i~l~~g~~e~i~~l~---~~gi~v~ivSgg~~~~i~~i~~~~g 179 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQ---QHGIPVFIFSAGIGDVLEEVIRQAG 179 (297)
T ss_dssp CCBCBTHHHHHHHHH---HTTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred CCCCCcHHHHHHHHH---HcCCeEEEEeCCcHHHHHHHHHHcC
Confidence 578999888888887 4678999999999999999999764
No 219
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=28.75 E-value=20 Score=34.03 Aligned_cols=65 Identities=14% Similarity=-0.050 Sum_probs=37.3
Q ss_pred HHHHHHHhccccEEEEEEeCCchHHHHHHHH--hhCCCCCccccccccCceEeecCCCcccHhhhcccCCCCCCeEEEEe
Q 003896 264 LRSYLIAKGRKRFEVYVCTMAERDYALEMWR--LLDPEGHLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVID 341 (788)
Q Consensus 264 LreFL~ak~sk~FElyVyTmgtR~YA~~Ilr--LLDPdgklF~~r~l~~RIisresg~~KsL~rLf~~g~~d~~~VVIID 341 (788)
..+.|+ ..-+.+.|.|.. ..+..+++ .|+-+ +|.. .+ ....-|..+....+.+++.++.|.
T Consensus 44 ~L~~Lk---~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--~~~g---------~~-~K~~~l~~~~~~~gi~~~~~~~vG 106 (168)
T 3ewi_A 44 GISLLK---KSGIEVRLISER--ACSKQTLSALKLDCK--TEVS---------VS-DKLATVDEWRKEMGLCWKEVAYLG 106 (168)
T ss_dssp HHHHHH---HTTCEEEEECSS--CCCHHHHHTTCCCCC--EECS---------CS-CHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred HHHHHH---HCCCEEEEEeCc--HHHHHHHHHhCCCcE--EEEC---------CC-ChHHHHHHHHHHcCcChHHEEEEe
Confidence 456776 466889999988 78888888 45443 3321 01 111223333332224677788887
Q ss_pred CCcc
Q 003896 342 DRCK 345 (788)
Q Consensus 342 DR~d 345 (788)
|...
T Consensus 107 D~~n 110 (168)
T 3ewi_A 107 NEVS 110 (168)
T ss_dssp CSGG
T ss_pred CCHh
Confidence 7653
No 220
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=26.31 E-value=17 Score=38.32 Aligned_cols=9 Identities=56% Similarity=0.859 Sum_probs=0.0
Q ss_pred EEeCCccee
Q 003896 141 VFDLDETLI 149 (788)
Q Consensus 141 V~DLDeTLi 149 (788)
|||+|+|||
T Consensus 29 VFD~DgTLi 37 (327)
T 4as2_A 29 VFDMDNTSY 37 (327)
T ss_dssp EECCBTTTE
T ss_pred EEeCCCCee
No 221
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=25.99 E-value=36 Score=32.22 Aligned_cols=15 Identities=33% Similarity=0.390 Sum_probs=12.4
Q ss_pred eEEEEeCCcceeecc
Q 003896 138 LAIVFDLDETLIVAN 152 (788)
Q Consensus 138 L~lV~DLDeTLi~A~ 152 (788)
-+++||+|+||+...
T Consensus 32 k~i~~D~DGtl~~~~ 46 (218)
T 2o2x_A 32 PALFLDRDGTINVDT 46 (218)
T ss_dssp CCEEECSBTTTBCCC
T ss_pred CEEEEeCCCCcCCCC
Confidence 468899999999863
No 222
>3k6q_A Putative ligand binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Syntrophomonas wolfei subsp}
Probab=23.59 E-value=2.5e+02 Score=26.99 Aligned_cols=56 Identities=16% Similarity=0.223 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCCCceEEEEeeeCCCceEEEEEEECCeEeEEEecCCHHHHHHHHHHHHHHHHH
Q 003896 628 IGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAENALHYLA 691 (788)
Q Consensus 628 KS~LQE~~QK~~~~peYelveesGH~~~FtveV~I~Gkk~G~G~GsSKKEAEQ~AAK~AL~~L~ 691 (788)
..+|.++++. .+.+++++.+.| ++.+.+.+-.+ .+.|.|+.+|.++.++.+++.-+
T Consensus 41 ~~lL~~~L~~--y~f~~e~i~EdG-----s~t~~l~eldi-~~~g~T~eeA~~~li~~l~eYAe 96 (139)
T 3k6q_A 41 EQIIKDLLQD--LKIHAELSKEDG-----IIIGTIDGFDL-VVSGESEQEVIQKLAEDLLEYAQ 96 (139)
T ss_dssp HHHHHHHTTT--CCEEEEEEEETT-----EEEEEETTTCC-EEEESSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc--ccCceEEEecCC-----eEEEEecCcee-EeeCCCHHHHHHHHHHHHHHHHH
Confidence 6789999843 344455544555 47788888766 68999999999999999988765
Done!