Query 003897
Match_columns 788
No_of_seqs 309 out of 858
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 07:38:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003897.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003897hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cc1_A BH1870 protein, putativ 100.0 5.3E-40 1.8E-44 368.7 26.7 375 219-692 13-432 (433)
2 1zy9_A Alpha-galactosidase; TM 100.0 7.6E-34 2.6E-38 327.8 29.5 390 136-610 122-529 (564)
3 1uas_A Alpha-galactosidase; TI 100.0 1.6E-33 5.4E-38 309.2 29.3 332 219-692 10-362 (362)
4 3hg3_A Alpha-galactosidase A; 100.0 3.7E-32 1.3E-36 301.1 28.1 337 219-694 10-391 (404)
5 1szn_A Alpha-galactosidase; (b 100.0 1.5E-31 5.1E-36 298.8 28.6 347 219-692 13-413 (417)
6 3a5v_A Alpha-galactosidase; be 100.0 2.8E-31 9.7E-36 294.9 26.9 349 219-693 10-394 (397)
7 4do4_A Alpha-N-acetylgalactosa 100.0 1.7E-31 5.8E-36 295.2 23.2 342 219-696 10-390 (400)
8 3a21_A Putative secreted alpha 100.0 1.9E-31 6.4E-36 311.2 24.7 349 218-694 12-388 (614)
9 3lrk_A Alpha-galactosidase 1; 100.0 3.1E-30 1.1E-34 289.5 22.4 293 219-610 31-364 (479)
10 4fnq_A Alpha-galactosidase AGA 99.9 1.9E-21 6.6E-26 230.8 37.3 377 144-610 254-670 (729)
11 2xn2_A Alpha-galactosidase; hy 99.9 1.8E-20 6.3E-25 222.4 29.9 286 120-459 232-534 (732)
12 2yfo_A Alpha-galactosidase-suc 99.8 1.2E-18 4E-23 206.5 31.4 280 120-459 228-522 (720)
13 3mi6_A Alpha-galactosidase; NE 99.8 8.2E-18 2.8E-22 198.5 28.1 376 121-569 230-642 (745)
14 2f2h_A Putative family 31 gluc 99.1 7.9E-09 2.7E-13 123.6 28.0 176 178-416 238-419 (773)
15 2g3m_A Maltase, alpha-glucosid 99.0 7.2E-09 2.5E-13 122.6 18.9 169 179-415 147-322 (693)
16 4ba0_A Alpha-glucosidase, puta 98.9 1.4E-08 4.9E-13 122.0 18.4 175 178-415 233-414 (817)
17 3lpp_A Sucrase-isomaltase; gly 98.7 2E-07 6.9E-12 112.8 19.6 176 179-415 290-474 (898)
18 3nsx_A Alpha-glucosidase; stru 98.7 2.6E-07 8.8E-12 108.9 19.7 203 134-415 100-312 (666)
19 2xvl_A Alpha-xylosidase, putat 98.7 1.7E-07 5.8E-12 114.5 18.6 173 179-415 405-584 (1020)
20 3l4y_A Maltase-glucoamylase, i 98.7 3E-07 1E-11 111.1 18.2 175 179-415 262-445 (875)
21 3a24_A Alpha-galactosidase; gl 98.4 3.9E-06 1.3E-10 97.9 15.8 213 230-558 304-542 (641)
22 3top_A Maltase-glucoamylase, i 97.9 0.0002 7E-09 86.7 18.6 102 179-334 263-364 (908)
23 2d73_A Alpha-glucosidase SUSB; 97.5 0.0019 6.6E-08 76.1 17.7 227 232-558 368-620 (738)
24 2x2h_A Alpha-1,4-glucan lyase 96.8 0.0027 9.2E-08 78.2 9.7 86 178-266 314-410 (1027)
25 1ea9_C Cyclomaltodextrinase; h 72.1 66 0.0023 36.7 16.2 29 389-417 300-329 (583)
26 3k1d_A 1,4-alpha-glucan-branch 71.9 38 0.0013 40.2 14.4 128 312-453 313-453 (722)
27 1gcy_A Glucan 1,4-alpha-maltot 70.4 77 0.0026 35.7 16.1 93 215-334 18-112 (527)
28 1m7x_A 1,4-alpha-glucan branch 69.1 74 0.0025 36.7 15.8 179 233-454 153-346 (617)
29 3zss_A Putative glucanohydrola 59.8 73 0.0025 37.6 13.5 169 220-416 229-417 (695)
30 1ht6_A AMY1, alpha-amylase iso 53.6 62 0.0021 35.0 10.9 29 389-417 155-184 (405)
31 1j0h_A Neopullulanase; beta-al 53.4 1.2E+02 0.0042 34.5 13.8 28 389-416 303-331 (588)
32 3edf_A FSPCMD, cyclomaltodextr 53.1 1.2E+02 0.0042 34.6 13.8 29 389-417 286-315 (601)
33 4ay1_A Chitinase-3-like protei 52.8 36 0.0012 36.4 8.7 57 387-446 92-148 (365)
34 1wzl_A Alpha-amylase II; pullu 52.6 1.2E+02 0.0039 34.7 13.4 29 389-417 301-329 (585)
35 3m07_A Putative alpha amylase; 52.3 39 0.0013 39.2 9.5 86 312-417 203-289 (618)
36 2dh2_A 4F2 cell-surface antige 51.6 40 0.0014 37.0 9.0 30 388-417 117-146 (424)
37 1mxg_A Alpha amylase; hyperthe 49.8 64 0.0022 35.4 10.3 28 389-416 170-201 (435)
38 3dhu_A Alpha-amylase; structur 46.6 1.5E+02 0.0052 32.2 12.7 147 233-417 28-176 (449)
39 4axn_A Chitinase C1; hydrolase 45.6 36 0.0012 35.9 7.1 26 391-416 117-142 (328)
40 2bhu_A Maltooligosyltrehalose 44.8 40 0.0014 38.9 7.9 138 233-418 142-280 (602)
41 3n12_A Chitinase A, chinctu2; 44.7 40 0.0014 35.9 7.4 31 387-417 90-120 (333)
42 3kru_A NADH:flavin oxidoreduct 41.2 44 0.0015 35.9 7.0 24 312-336 81-104 (343)
43 3aml_A OS06G0726400 protein; s 40.3 2.4E+02 0.0083 33.5 13.8 33 385-418 316-349 (755)
44 3hgj_A Chromate reductase; TIM 37.3 52 0.0018 35.3 6.9 24 312-336 81-104 (349)
45 4ac1_X Endo-N-acetyl-beta-D-gl 36.9 2.3E+02 0.0078 29.3 11.6 27 389-415 101-127 (283)
46 3g6m_A Chitinase, crchi1; inhi 36.5 37 0.0013 37.1 5.6 70 386-457 125-194 (406)
47 3poh_A Endo-beta-N-acetylgluco 34.6 99 0.0034 34.7 8.7 30 387-416 261-290 (451)
48 4a3u_A NCR, NADH\:flavin oxido 33.4 1.2E+02 0.004 32.6 8.9 24 312-336 79-102 (358)
49 4ba0_A Alpha-glucosidase, puta 33.1 1.1E+02 0.0039 36.7 9.5 31 747-777 764-808 (817)
50 3gka_A N-ethylmaleimide reduct 33.0 2.4E+02 0.0083 30.4 11.3 24 312-336 87-110 (361)
51 1z41_A YQJM, probable NADH-dep 32.7 72 0.0025 33.9 7.0 24 312-336 83-106 (338)
52 4f9d_A Poly-beta-1,6-N-acetyl- 32.2 5.2E+02 0.018 30.0 14.5 90 313-419 344-434 (618)
53 2ebn_A Endo-beta-N-acetylgluco 31.7 99 0.0034 32.6 7.7 29 388-416 105-133 (289)
54 4ab4_A Xenobiotic reductase B; 31.4 2.1E+02 0.0072 30.9 10.5 24 312-336 79-102 (362)
55 3gr7_A NADPH dehydrogenase; fl 29.9 92 0.0032 33.3 7.3 24 312-336 83-106 (340)
56 1ll7_A Chitinase 1; beta-alpha 28.0 55 0.0019 35.5 5.1 69 387-457 108-176 (392)
57 3ebv_A Chinitase A; chitinase 27.6 1.2E+02 0.0041 31.9 7.5 30 387-416 93-122 (302)
58 1goi_A Chitinase B; chitin deg 27.4 62 0.0021 36.4 5.6 67 386-457 115-184 (499)
59 3l5l_A Xenobiotic reductase A; 26.0 1.1E+02 0.0038 32.8 7.1 24 312-336 80-103 (363)
60 2hsa_B 12-oxophytodienoate red 25.8 2.1E+02 0.0072 31.3 9.3 23 313-336 94-116 (402)
61 1w9p_A Chitinase; peptide inhi 25.3 61 0.0021 35.8 5.0 69 387-457 149-217 (433)
62 1vyr_A Pentaerythritol tetrani 24.0 3.1E+02 0.01 29.4 10.1 23 313-336 82-104 (364)
63 2r14_A Morphinone reductase; H 24.0 2.4E+02 0.0082 30.5 9.3 24 312-336 85-108 (377)
64 3k30_A Histamine dehydrogenase 23.6 2.3E+02 0.0079 32.8 9.7 24 312-336 89-112 (690)
65 1icp_A OPR1, 12-oxophytodienoa 22.2 2.6E+02 0.009 30.1 9.2 24 312-336 91-114 (376)
66 3ian_A Chitinase; structural g 22.1 56 0.0019 34.6 3.7 27 391-417 100-126 (321)
67 1edq_A Chitinase A; beta-alpha 21.7 95 0.0032 35.4 5.7 31 387-417 263-294 (540)
68 2pi6_A Chitinase-3-like protei 21.2 1E+02 0.0036 32.8 5.7 52 387-441 91-142 (361)
69 2y8v_A CHIC, class III chitina 20.7 2E+02 0.0068 29.7 7.6 30 387-416 106-135 (290)
70 2kpo_A Rossmann 2X2 fold prote 20.6 2E+02 0.0068 24.7 6.0 55 179-256 3-57 (110)
71 3cz8_A Putative sporulation-sp 20.6 87 0.003 32.8 4.8 31 387-417 92-122 (319)
No 1
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=100.00 E-value=5.3e-40 Score=368.74 Aligned_cols=375 Identities=17% Similarity=0.199 Sum_probs=246.0
Q ss_pred CcccccccccccccCHHHHHHHHHHh----HhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC
Q 003897 219 KFGWCTWDAFYLTVQPHGVMEGVKGL----VDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN 294 (788)
Q Consensus 219 ~~GWCTWdafy~~Vte~~V~~~l~~L----~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an 294 (788)
.||||||++||+++||++|++.++.| ++.|+ ++|+||||||...++.. ..+.... .. ...+.++.++
T Consensus 13 p~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~--~~~~iDDgW~~~~~~~~---~y~~~~~---~~-~d~~G~~~~~ 83 (433)
T 3cc1_A 13 PMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGW--EYIVVDIQWYEPTANSS---AYNPFAP---LC-MDEYGRLLPA 83 (433)
T ss_dssp CEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTC--CEEEECSCTTCCCTTST---TCCTTSC---SC-BCTTSCBCCC
T ss_pred CEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCC--eEEEECCCcCCCCCccc---ccccccc---cc-cCCCCCEeEC
Confidence 48999999999999999999999999 44555 59999999998754311 0000000 00 0124556665
Q ss_pred -CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccc
Q 003897 295 -FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL 373 (788)
Q Consensus 295 -~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~ 373 (788)
+|||+.. .+.||++++++||++ | +| +|+|+...-.+..+.|+++....+. +..|+
T Consensus 84 ~~kFP~~~--------~~~Gl~~l~~~ih~~-G-lk-~Giw~~p~i~~~~v~~~s~~~~~~~-------------~~~di 139 (433)
T 3cc1_A 84 TNRFPSAK--------NGAGFKPLSDAIHDL-G-LK-FGIHIMRGIPRQAVYENSPVLGSTK-------------TAREI 139 (433)
T ss_dssp TTTCGGGT--------TTTTTHHHHHHHHHT-T-CE-EEEEEESSEEHHHHHHTCBCTTSSC-------------BHHHH
T ss_pred CccCCCcc--------cCCCHHHHHHHHHHc-C-Ce-eEEEeCCCCchhccCCCCccccccc-------------eeccc
Confidence 8899421 124999999999999 8 99 7999754211112344443211110 11111
Q ss_pred ccccee------ccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhcc
Q 003897 374 AVDKIV------NNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHF 447 (788)
Q Consensus 374 a~~~i~------~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F 447 (788)
+..... ..++++.+| ++++||+.++++|++|||||||+|+|+. ..+. .+ ..+..++|++||+++
T Consensus 140 ~~~~~~~~~~~~~~~lD~~~p-~~~~~~~~~~~~l~~~GvDyvK~D~~~~-~~~~-~~--~~~~~~~~~~aL~~~----- 209 (433)
T 3cc1_A 140 AHTNSICPWNTDMYGVDPTKE-GAQSYYNSLFELYAQWGVDFVKVDDIAA-SRLY-DT--HLEEIKMIQRAIQAC----- 209 (433)
T ss_dssp EETTCCBTTBTTEEEECTTST-THHHHHHHHHHHHHHTTCCEEEEESCSC-TTSS-CC--CHHHHHHHHHHHHHS-----
T ss_pred ccCCcccCCCCCceeecCCCH-HHHHHHHHHHHHHHHcCCCEEEeCCccc-ccCC-cc--cHHHHHHHHHHHHhc-----
Confidence 110000 112455665 4999999999999999999999999976 2221 11 345566777777653
Q ss_pred CCCceeeecCCCccc----cccccccccccccccccccCCCCCCCCCCccccchhHHH-hhhhhhcccCCccCCcccccc
Q 003897 448 KGNGVIASMEHCNDF----MLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVH-CAYNSLWMGNFIHPDWDMFQS 522 (788)
Q Consensus 448 ~g~~iI~CMs~~~~~----~~~~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~~-~a~Nsl~~g~~~~PDwDMF~S 522 (788)
+++|+.|||+++.. .+..+..++| |+|||+|++++ . ..||+. +++++.+.+...|||+|||+.
T Consensus 210 -gr~i~~slc~g~~~~~~~~~~~~~~n~w-R~s~D~~~~w~--------~--~~~~~~~~~~~~~~~~~g~~nD~Dml~v 277 (433)
T 3cc1_A 210 -GRPMVLSLSPGPAPIKYAHHFKTNANMW-RITDDFWDDWS--------L--LYQMFERCEVWEKHIGTGHWPDCGMLPL 277 (433)
T ss_dssp -SSCCEEECCCSBSSEESCSSSCCTTGGG-CCEECCCSCHH--------H--HHHHHHHHHHHHHSCCCSCCCBCCCBCC
T ss_pred -CCCEEEEecCCCCChhhhhhhhhhCcEE-EeccCccccHH--------H--HHHHHHHHHHHHhhcCCCccCChHHhcc
Confidence 88999999986322 2445778888 99999999865 2 456665 557888888899999999998
Q ss_pred cC-------------------cchHHHHHHHHHcCCCeEEeeCCCCCChh---hhh-hhhC---CCCceecccccCccCc
Q 003897 523 TH-------------------PCAEFHAASRAISGGPIYVSDCVGKHNFP---LLK-RLSM---PDGSILRCEYYALPTR 576 (788)
Q Consensus 523 ~h-------------------~~a~~HAaaRaisGgPVyvSD~pg~hd~~---lL~-~lv~---pdG~ilR~~~pg~pt~ 576 (788)
.| .+.++|+++||++++|+++||.+.+-+-+ ||+ +-++ +||..-| |.
T Consensus 278 g~~g~~~~~~~~~~~~~~lt~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL~N~eviavnqdg~~~~------~v- 350 (433)
T 3cc1_A 278 GHIGIRSVDGPGGDRWTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNR------FV- 350 (433)
T ss_dssp SEECTTCSSSSSSSEECSSCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHCCHHHHHHHHHCEEEE------EE-
T ss_pred cCccccccccccccccCCCCHHHHHHHHHHHHHhcCceEecCccccCCHHHHHHhcChhheeecCCCcCce------ee-
Confidence 75 34577999999999999999998877644 443 1111 4554333 21
Q ss_pred cccccccCCCCcceEEEEec--CCcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCCCCCcccCCce
Q 003897 577 DCLFADPLHDGKTMLKIWNL--NKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQ 654 (788)
Q Consensus 577 D~lf~dp~~d~~~lLki~n~--~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~ 654 (788)
+. ++ -+.||.. ..+.-+|++||.+... .+++ +..+++... +
T Consensus 351 ---~~----~~--~~~vw~~~l~~g~~~val~N~~~~~---------------~~~~--~~~~~lgl~---------~-- 393 (433)
T 3cc1_A 351 ---YR----EE--DKVAWAANGRNGEAYVALFNLHDQQ---------------KTLQ--FRLDMVGIM---------E-- 393 (433)
T ss_dssp ---EE----ET--TEEEEEEECSSSCEEEEEEECSSSC---------------EEEE--ECGGGTTCC---------S--
T ss_pred ---Ee----cC--CcEEEEEECCCCCEEEEEEeCCCCC---------------EEEE--EEHHHcCCC---------C--
Confidence 11 12 2556654 3455689999975421 1222 333444211 2
Q ss_pred eEEEEEecccE-EEecCCCCcEEEEecCCcEEEEEEEee
Q 003897 655 VFAMYLQEAKK-LVLSKPYENIEISLEPFSFELITVSAV 692 (788)
Q Consensus 655 ~~~vy~~~sg~-l~~l~~~~~~~v~L~~~~~ei~t~~Pv 692 (788)
.|-|+.--+++ +.....+..++++|++.++.+|.+.|.
T Consensus 394 ~~~v~Dlw~~~~~g~~~~~~~~~~~v~~hg~~l~~l~~~ 432 (433)
T 3cc1_A 394 TVQLFNVWDRSFLQSLAPSESFQIELKPHQSMMLKLSPD 432 (433)
T ss_dssp CEEEEETTTTEEEEEECTTCCEEEEECTTCEEEEEEEEC
T ss_pred ceEEEECCCCCccccccCCceEEEEECCCcEEEEEEEeC
Confidence 57788887777 434433448999999999999999885
No 2
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=100.00 E-value=7.6e-34 Score=327.80 Aligned_cols=390 Identities=14% Similarity=0.099 Sum_probs=248.8
Q ss_pred EEEEEEeeeCCeEEEecCCCCCcEEEEEEcCCcccc-ccccceEEEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 003897 136 YVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVT-GDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPP 214 (788)
Q Consensus 136 y~vlLp~~~~~~~~~L~~~~~~~~~i~~~sg~~~v~-~~~~~~~~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P 214 (788)
++++=.+++..+++.|.-+ ++++.++++...+..+ +.+....++ ..|++|.+++++..++.+++. ++...+.+
T Consensus 122 ~~~~G~~~~~~~~~~f~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~-~~g~~~~~v~~~y~~l~g~~~---~p~w~~~~- 195 (564)
T 1zy9_A 122 GKVYGFLSSKIAHPFFAVE-DGELVAYLEYFDVEFDDFVPLEPLVV-LEDPNTPLLLEKYAELVGMEN---NARVPKHT- 195 (564)
T ss_dssp TEEEEESCCSSSEEEEEEE-TTEEEEEEECTTCCEEEEEECCCEEE-EECSCHHHHHHHHHHHHHHHT---TCCCCSSC-
T ss_pred ceEEEEEecCCccceEEEe-cCcEEEEEecCCccccceeecceEEE-EeCCCHHHHHHHHHHHhcccC---CCccccCC-
Confidence 4444444455666666444 6778999998664432 222233343 379999999999988888763 22222222
Q ss_pred CcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCccc-
Q 003897 215 PIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQE- 293 (788)
Q Consensus 215 ~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~a- 293 (788)
.+|||||++||+++||++|++.++.+++.|+ .+++||||||+..+ +|..
T Consensus 196 ----P~gwnsW~~~~~~~te~~v~~~ad~~~~~G~--~~~~IDdgW~~~~G------------------------dw~~d 245 (564)
T 1zy9_A 196 ----PTGWCSWYHYFLDLTWEETLKNLKLAKNFPF--EVFQIDDAYEKDIG------------------------DWLVT 245 (564)
T ss_dssp ----CEEEESHHHHGGGCCHHHHHHHHHHGGGTTC--SEEEECTTSEEETT------------------------EEEEE
T ss_pred ----ceEEcchhccCcCCCHHHHHHHHHHHHhcCC--cEEEECcccccccC------------------------CcccC
Confidence 3899999999999999999999999997555 59999999997422 2433
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccc
Q 003897 294 NFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL 373 (788)
Q Consensus 294 n~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~ 373 (788)
++||| + |++++++||++ | +| +++|..+. .+.|+++..++....+ .+.+|......+
T Consensus 246 ~~kFP-------------~-lk~lvd~lh~~-G-lk-~Giw~~P~----~v~~~S~ly~~~pdw~--v~~~G~~~~~~~- 301 (564)
T 1zy9_A 246 RGDFP-------------S-VEEMAKVIAEN-G-FI-PGIWTAPF----SVSETSDVFNEHPDWV--VKENGEPKMAYR- 301 (564)
T ss_dssp CTTCC-------------C-HHHHHHHHHHT-T-CE-EEEEECTT----EEETTCHHHHHCGGGB--CEETTEECEEEE-
T ss_pred cccCC-------------C-HHHHHHHHHHC-C-CE-EEEEeCCC----ccCCCChhHHhCCCeE--EecCCeeeeeec-
Confidence 48899 4 99999999998 8 99 89996643 1333331110000000 000121100000
Q ss_pred cccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccC-CCce
Q 003897 374 AVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFK-GNGV 452 (788)
Q Consensus 374 a~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~-g~~i 452 (788)
.++.- ...+++.+| ++++|+.+..+.++++||||||+|.+......+..++ .++..++|+++|++ +++.|+ +.-+
T Consensus 302 ~W~~~-~~~lD~t~P-~a~~~~~~~~~~~~~~GVD~iK~D~~~~~~~~g~~~~-~~~~~~~y~~~l~~-l~~~~pr~i~i 377 (564)
T 1zy9_A 302 NWNKK-IYALDLSKD-EVLNWLFDLFSSLRKMGYRYFKIDFLFAGAVPGERKK-NITPIQAFRKGIET-IRKAVGEDSFI 377 (564)
T ss_dssp ETTEE-EEEBCTTCH-HHHHHHHHHHHHHHHTTCCEEEECCGGGGGCSSBCSS-SCCHHHHHHHHHHH-HHHHHCTTSEE
T ss_pred ccCCc-eeecCCCCH-HHHHHHHHHHHHHHhcCCCEEEEcCCCCccccccccc-cchHHHHHHHHHHH-HHhhCCCCeEE
Confidence 00000 011344554 6777777777767999999999999876443333333 45678899999987 566677 5556
Q ss_pred eeecCCCcccccccccccccccccccc---ccCCCCCCCCCCccccchhHHHhhhhhhcccCC-ccCCccccccc----C
Q 003897 453 IASMEHCNDFMLLGTEAIALGRVGDDF---WCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNF-IHPDWDMFQST----H 524 (788)
Q Consensus 453 I~CMs~~~~~~~~~~~~~~~~R~SDDf---~p~dp~~~p~w~~~sh~~Hi~~~a~Nsl~~g~~-~~PDwDMF~S~----h 524 (788)
.+|+++. ....+..+++ |+|+|+ |+++.+..- .....+.+.++++.+++... .|+|+||+... |
T Consensus 378 ~~C~~g~---~~s~~~~n~~-Ris~Di~~~W~s~~~~~~----~p~~~~~~~n~~~~~~~~~~~~~nDPDml~vg~~~~~ 449 (564)
T 1zy9_A 378 LGCGSPL---LPAVGCVDGM-RIGPDTAPFWGEHIEDNG----APAARWALRNAITRYFMHDRFWLNDPDCLILREEKTD 449 (564)
T ss_dssp EECSCBS---GGGTTTCSEE-ECSSCCCSSCCTTSCSSS----SSCHHHHHHHHHHTGGGBTTTBEEECCCBCCCSSSCC
T ss_pred EecCCcc---cccccccceE-EEcCCccccccccccccc----cHHHHHHHHHHHHHHhhccCCcccCCCEeEecCCCCC
Confidence 7888853 2234667788 999999 555431000 00123445667777777553 57777776643 2
Q ss_pred ---cchHHHHHHHHHcCCCeEEeeCCC---CCChhhhhhhhCCCCceecccccCccCccccccccCCCCcceEEEEecCC
Q 003897 525 ---PCAEFHAASRAISGGPIYVSDCVG---KHNFPLLKRLSMPDGSILRCEYYALPTRDCLFADPLHDGKTMLKIWNLNK 598 (788)
Q Consensus 525 ---~~a~~HAaaRaisGgPVyvSD~pg---~hd~~lL~~lv~pdG~ilR~~~pg~pt~D~lf~dp~~d~~~lLki~n~~~ 598 (788)
.++++|++++|++|+|+++||.+. ++++++|++++..+|...|.+ ++..++. +..+|.-..
T Consensus 450 lT~~E~r~h~alwAi~g~PLiigddl~~l~~~~l~lL~evIavng~~~~~~------------~~~~~~~-vw~v~a~~~ 516 (564)
T 1zy9_A 450 LTQKEKELYSYTCGVLDNMIIESDDLSLVRDHGKKVLKETLELLGGRPRVQ------------NIMSEDL-RYEIVSSGT 516 (564)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHHHHHTTCSSEEEET------------TTTCSSS-EEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCeeeccCcccCCHHHHHHHHHHHHHcCCcceee------------cCCCCce-EEEEecCCC
Confidence 257899999999999999999877 688999999998886554432 3322221 233334322
Q ss_pred cc-eEEEEeecCC
Q 003897 599 YT-GVIGAFNCQG 610 (788)
Q Consensus 599 ~~-gvlg~FN~~g 610 (788)
.. -+|++||...
T Consensus 517 ~~g~aValfN~~~ 529 (564)
T 1zy9_A 517 LSGNVKIVVDLNS 529 (564)
T ss_dssp TTEEEEEEEETTT
T ss_pred CCCEEEEEEECCC
Confidence 22 5899999765
No 3
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=100.00 E-value=1.6e-33 Score=309.24 Aligned_cols=332 Identities=17% Similarity=0.168 Sum_probs=222.7
Q ss_pred CcccccccccccccCHHHHHHHHHHhHhCCCC---CcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC-
Q 003897 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN- 294 (788)
Q Consensus 219 ~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an- 294 (788)
.||||||++|++++||+.|++.++.+++.|++ .++|+||||||...++.. .+|.++
T Consensus 10 p~gwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~--------------------G~~~~~~ 69 (362)
T 1uas_A 10 QMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQ--------------------GNFVPNR 69 (362)
T ss_dssp CEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTT--------------------SCCCBCT
T ss_pred CEEEECHHHHCCCCCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCC--------------------CCeeECh
Confidence 48999999999999999999999999665554 469999999997544321 235555
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCccccccccc
Q 003897 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (788)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a 374 (788)
+||| +||++++++||++ | +| +|+|+.....|.+ + ..||+
T Consensus 70 ~~FP-------------~Gl~~l~~~ih~~-G-lk-~Giw~~~~~~~~~--~---------------~~pg~-------- 108 (362)
T 1uas_A 70 QTFP-------------SGIKALADYVHAK-G-LK-LGIYSDAGSQTCS--N---------------KMPGS-------- 108 (362)
T ss_dssp TTCT-------------TCHHHHHHHHHHT-T-CE-EEEEEESSSBCTT--S---------------SSBCC--------
T ss_pred hccC-------------ccHHHHHHHHHHC-C-CE-eEEEeeCCCcccc--C---------------CCCCc--------
Confidence 7899 7999999999998 8 99 8999875433322 0 11232
Q ss_pred ccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCCceee
Q 003897 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIA 454 (788)
Q Consensus 375 ~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~ 454 (788)
+.+++..++++++|||||||+|+|.... ....+.| .+|.++++++++.--+-.
T Consensus 109 -----------------~~~~~~~~~~~~~wGvdyvK~D~~~~~~---------~~~~~~y-~~~~~al~~~~~~i~~~~ 161 (362)
T 1uas_A 109 -----------------LDHEEQDVKTFASWGVDYLKYDNCNDAG---------RSVMERY-TRMSNAMKTYGKNIFFSL 161 (362)
T ss_dssp -----------------TTCHHHHHHHHHHHTCCEEEEECCCCTT---------CCHHHHH-HHHHHHHHHHCTTSEEEE
T ss_pred -----------------hhHHHHHHHHHHHcCCCEEEECccCCCC---------CCHHHHH-HHHHHHHHhhCCCcEEEe
Confidence 1345777888999999999999986411 1223344 466666778765431223
Q ss_pred ecCCC-ccccccccccccccccccccccCCCCCCCCCCccccchhHHHhhhhhhcccCCccCCcccccccC-----cchH
Q 003897 455 SMEHC-NDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTH-----PCAE 528 (788)
Q Consensus 455 CMs~~-~~~~~~~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~~~a~Nsl~~g~~~~PDwDMF~S~h-----~~a~ 528 (788)
|+++. ....|.+...++| |+|+|++|..+ .. ..++..+++.+-+.+++.|+|+||++..+ ...+
T Consensus 162 c~~g~~~p~~w~~~~~n~~-R~~~D~~~~w~--------~~-~~~~~~~~~~~~~~~pg~~~D~Dml~vg~~~~t~~e~~ 231 (362)
T 1uas_A 162 CEWGKENPATWAGRMGNSW-RTTGDIADNWG--------SM-TSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYR 231 (362)
T ss_dssp ESTTTTCGGGTGGGTCSEE-ECSSCCCSSHH--------HH-HHHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHH
T ss_pred cCCCCCChHHHHhhheeEE-EecCCCCcCch--------hH-HHHHHHHHHHHHhcCCCcccCcchheeCCCCCCHHHHH
Confidence 66543 2236777888999 99999998754 22 23344567777788889999999999754 3568
Q ss_pred HHHHHHHHcCCCeEEeeCCCCCC---hhhhhh-hh---CCC--CceecccccCccCccccccccCCCCcceEEEEec--C
Q 003897 529 FHAASRAISGGPIYVSDCVGKHN---FPLLKR-LS---MPD--GSILRCEYYALPTRDCLFADPLHDGKTMLKIWNL--N 597 (788)
Q Consensus 529 ~HAaaRaisGgPVyvSD~pg~hd---~~lL~~-lv---~pd--G~ilR~~~pg~pt~D~lf~dp~~d~~~lLki~n~--~ 597 (788)
.|++++|++++|+++++.+.+.+ +++|+. -+ -+| |. +|++.. . ++. ..||.. .
T Consensus 232 ~~~al~~i~~spL~~~~Dl~~~~~~~~~~l~n~evia~~qd~lg~------~~~~v~----~----~~~--~~v~a~~~~ 295 (362)
T 1uas_A 232 SHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGV------QGKKVQ----S----DNG--LEVWAGPLS 295 (362)
T ss_dssp HHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCTTCC------CCEEEE----E----ETT--EEEEEEECS
T ss_pred HHHHHHHHhCCceEecCChhhCCHHHHHhhcCHHHhhhcccccCc------cceEEE----e----cCC--eEEEEEEcC
Confidence 99999999999999998888776 456652 22 244 21 122211 1 111 235543 3
Q ss_pred CcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCCCCCcccCCceeEEEEEecccEEEecCCCCcEEE
Q 003897 598 KYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYLQEAKKLVLSKPYENIEI 677 (788)
Q Consensus 598 ~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~~vy~~~sg~l~~l~~~~~~~v 677 (788)
.++-+||+||..... .+++ +..+++... +...|.|+.--+++-... .+.+++
T Consensus 296 ~~~~~v~~~N~~~~~---------------~~~~--~~l~~lgl~---------~~~~~~v~dlw~~~~~~~--~~~l~~ 347 (362)
T 1uas_A 296 NNRKAVVLWNRQSYQ---------------ATIT--AHWSNIGLA---------GSVAVTARDLWAHSSFAA--QGQISA 347 (362)
T ss_dssp TTCEEEEEEECSSSC---------------EEEE--EEGGGTTCC---------TTCEEEEEETTTTEEEEE--ESEEEE
T ss_pred CCCEEEEEEeCCCCC---------------EEEE--EEHHHcCCC---------CCCcEEEEECcCCCcccc--cceEEE
Confidence 455689999965421 1122 223333200 223677775555543222 577999
Q ss_pred EecCCcEEEEEEEee
Q 003897 678 SLEPFSFELITVSAV 692 (788)
Q Consensus 678 ~L~~~~~ei~t~~Pv 692 (788)
+|.+.+.-++.+.|+
T Consensus 348 ~l~~~g~~~~~l~~~ 362 (362)
T 1uas_A 348 SVAPHDCKMYVLTPN 362 (362)
T ss_dssp EECTTCEEEEEEEEC
T ss_pred EECCCeEEEEEEEeC
Confidence 999999999998875
No 4
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=100.00 E-value=3.7e-32 Score=301.06 Aligned_cols=337 Identities=16% Similarity=0.153 Sum_probs=223.8
Q ss_pred Ccccccccccccc----------cCHHHHHHHHHHhHhCCCC---CcEEEEecCCCCcCCCCCCCCccccccccccCcCc
Q 003897 219 KFGWCTWDAFYLT----------VQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMP 285 (788)
Q Consensus 219 ~~GWCTWdafy~~----------Vte~~V~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~ 285 (788)
.||||||++|+++ |||+.|++.++.|++.|++ .+||+||||||...++..
T Consensus 10 pmGWnsW~~~~~~~d~~~~~~~~i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~----------------- 72 (404)
T 3hg3_A 10 TMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSE----------------- 72 (404)
T ss_dssp CEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTT-----------------
T ss_pred ceEEEcHhhhccCccccccccCCcCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCC-----------------
Confidence 5999999999998 7999999999998866554 269999999998655422
Q ss_pred ccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCC
Q 003897 286 CRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSP 364 (788)
Q Consensus 286 ~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~sp 364 (788)
.++.++ +||| +||++++++||++ | +| +|+|.. +.. .++ ...|
T Consensus 73 ---G~~~~~~~kFP-------------~Gl~~l~~~ih~~-G-lk-~Giw~~---------~g~-----~tC----~~~p 115 (404)
T 3hg3_A 73 ---GRLQADPQRFP-------------HGIRQLANYVHSK-G-LK-LGIYAD---------VGN-----KTC----AGFP 115 (404)
T ss_dssp ---SCCCBCTTTST-------------THHHHHHHHHHHT-T-CE-EEEEEE---------SSS-----BCT----TSSB
T ss_pred ---CCeeeChhhcC-------------CCHHHHHHHHHHC-C-Ce-eEEEec---------CCc-----ccc----CCCC
Confidence 135555 7899 7999999999998 8 99 899954 221 122 1234
Q ss_pred CcccccccccccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHH
Q 003897 365 GLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVR 444 (788)
Q Consensus 365 G~~~~~~d~a~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~ 444 (788)
|+.+++ +...+.+++|||||||+|+|+.-. .+..+.-+.+|.++++
T Consensus 116 Gs~~~~-------------------------~~da~~fa~WGvDylK~D~C~~~~---------~~~~~~~y~~m~~AL~ 161 (404)
T 3hg3_A 116 GSFGYY-------------------------DIDAQTFADWGVDLLKFAGCYCDS---------LENLADGYKHMSLALN 161 (404)
T ss_dssp CCTTCH-------------------------HHHHHHHHHHTCCEEEEECCSCSC---------HHHHHHHHHHHHHHHH
T ss_pred ccHHHH-------------------------HHHHHHHHHhCCcEEEecCcCCCc---------chhHHHHHHHHHHHHH
Confidence 544333 333345699999999999986311 1112233456666666
Q ss_pred hccCCCceeeecCCCcccccc---------ccccccccccccccccCCCCCCCCCCccccchhHHH-----hhhhhhccc
Q 003897 445 KHFKGNGVIASMEHCNDFMLL---------GTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVH-----CAYNSLWMG 510 (788)
Q Consensus 445 ~~F~g~~iI~CMs~~~~~~~~---------~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~~-----~a~Nsl~~g 510 (788)
+. ||.|+++ |.++...+. .+..++| |+++|+++.+. .-.+|+. +...+-+.|
T Consensus 162 ~t--GRpi~~s-c~w~~~~~~~~~~~~~~~~~~~n~W-R~~~Di~d~W~----------sv~~i~~~~~~~~~~~~~~ag 227 (404)
T 3hg3_A 162 RT--GRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHW-RNFADIDDSWK----------SIKSILDWTSFNQERIVDVAG 227 (404)
T ss_dssp HT--TCCCEEE-ECTGGGGTTTSCCCHHHHHHHCSEE-ECSCCCCSSHH----------HHHHHHHHHHHTHHHHTTTCB
T ss_pred hc--CCCEEEE-eCCCcccccccccchHHHhhhCcEE-EecCCcCcchH----------HHHHHHHHHhhhhhhhHhhcC
Confidence 55 9999998 776543221 2456888 99999998743 2234443 223355678
Q ss_pred CCccCCcccccccC-----cchHHHHHHHHHcCCCeEEeeCCCCCC---hhhhh-hhhC---CC--CceecccccCccCc
Q 003897 511 NFIHPDWDMFQSTH-----PCAEFHAASRAISGGPIYVSDCVGKHN---FPLLK-RLSM---PD--GSILRCEYYALPTR 576 (788)
Q Consensus 511 ~~~~PDwDMF~S~h-----~~a~~HAaaRaisGgPVyvSD~pg~hd---~~lL~-~lv~---pd--G~ilR~~~pg~pt~ 576 (788)
+..|+|+||+...+ .+.+.|.+++|+.+.|+.|++..-+-+ .+||+ +-|+ +| |.- |++.
T Consensus 228 pG~wnDpDML~vGn~glT~~E~rthfslWai~~sPLiiG~Dl~~~~~~tl~iLtN~evIAinQD~lG~q------~~~v- 300 (404)
T 3hg3_A 228 PGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQ------GYQL- 300 (404)
T ss_dssp TTBEEECCCBCTTSSSCCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCTTCCC------CEEE-
T ss_pred CCCcCCCcceecCCCCCCHHHHHHHHHHHHHhcCceEecCCcccCCHHHHHHhcCHHHHhhhccccCCc------ceEE-
Confidence 88999999999864 477999999999999999997765555 55555 3333 55 321 2221
Q ss_pred cccccccCCCCcceEEEEec--CCcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCCCCCcccCCce
Q 003897 577 DCLFADPLHDGKTMLKIWNL--NKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQ 654 (788)
Q Consensus 577 D~lf~dp~~d~~~lLki~n~--~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~ 654 (788)
+ .++. +-||.. ..++-+|++||....+ .+ .+-++..+++..... ....
T Consensus 301 ---~----~~~~--~~VW~~~l~~g~~aValfN~~~~~-------------~~--~~vtv~~~~lGl~~~------~~~~ 350 (404)
T 3hg3_A 301 ---R----QGDN--FEVWERPLSGLAWAVAMINRQEIG-------------GP--RSYTIAVASLGKGVA------CNPA 350 (404)
T ss_dssp ---E----EETT--EEEEEEECSTTCEEEEEEECCCSS-------------SC--EEEEEEGGGSGGGTT------TSSE
T ss_pred ---E----ecCC--eEEEEEECCCCCEEEEEEEcCCCC-------------Cc--eEEEEEHHHcCCccc------CCCC
Confidence 1 1122 345554 3455689999965421 01 222233445532000 0234
Q ss_pred eEEEEEecccE-EEecCCCCcEEEEecCCcEEEEEEEeeee
Q 003897 655 VFAMYLQEAKK-LVLSKPYENIEISLEPFSFELITVSAVTL 694 (788)
Q Consensus 655 ~~~vy~~~sg~-l~~l~~~~~~~v~L~~~~~ei~t~~Pv~~ 694 (788)
.|.|+.-=+++ +......+.++++|++.+.-+|.+.|...
T Consensus 351 ~~~vrDLW~~~~lg~~~~~~~~~~~V~pHg~~llrlt~~~~ 391 (404)
T 3hg3_A 351 CFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQLENTMQ 391 (404)
T ss_dssp EEEEEEESSCEEEEEEETTCEEEEEECTTCEEEEEEEEHHH
T ss_pred ceEEEECCCCcccccccccceEEEEECCCeEEEEEEEcCCc
Confidence 68888887776 33344467899999999999999999764
No 5
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=100.00 E-value=1.5e-31 Score=298.85 Aligned_cols=347 Identities=16% Similarity=0.182 Sum_probs=224.8
Q ss_pred CcccccccccccccCHHHHHHHHHHhHhCCCC---CcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC-
Q 003897 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN- 294 (788)
Q Consensus 219 ~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an- 294 (788)
.||||||++||+++||+.|++.++.+++.|++ .++|+||||||...++. +.++.++
T Consensus 13 pmgwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~--------------------~G~~~~~~ 72 (417)
T 1szn_A 13 SLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV--------------------DGHIAPNA 72 (417)
T ss_dssp CEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB--------------------TTBCCBCT
T ss_pred CEEEEchHhhCcCCCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCC--------------------CCCEEECc
Confidence 48999999999999999999999999555554 46999999999765431 2345555
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCccccccccc
Q 003897 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (788)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a 374 (788)
+||| +||++++++||++ | +| +|+|+..- |+ .+. ..||+.+++
T Consensus 73 ~kFP-------------~Gl~~l~~~i~~~-G-lk-~Giw~~~g-------~~-------~c~----~~Pgs~~~~---- 114 (417)
T 1szn_A 73 TRFP-------------DGIDGLAKKVHAL-G-LK-LGIYSTAG-------TA-------TCA----GYPASLGYE---- 114 (417)
T ss_dssp TTCT-------------THHHHHHHHHHHT-T-CE-EEEEEESS-------SB-------CTT----SCBCCTTCH----
T ss_pred ccCC-------------cCHHHHHHHHHHc-C-CE-EEEEeCCC-------Cc-------hhc----cCcchHhHH----
Confidence 7899 7999999999998 8 99 89998622 21 111 123433221
Q ss_pred ccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcc-----------------------------c
Q 003897 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCEN-----------------------------Y 425 (788)
Q Consensus 375 ~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~-----------------------------~ 425 (788)
+..++.+++|||||||+|++.....+.+. +
T Consensus 115 ---------------------~~d~~~~~~wGvdylK~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~g~~~~p~~~~~~~ 173 (417)
T 1szn_A 115 ---------------------DVDAADFADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGY 173 (417)
T ss_dssp ---------------------HHHHHHHHHTTCCEEEEECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTC
T ss_pred ---------------------HHHHHHHHHcCCCEEEECCCCCccccccccccccccccccccccccccccccccccccc
Confidence 12267789999999999999432222111 1
Q ss_pred CCcchhHHHHHHHHHHHHHhccCCCceeeecCCCcc---ccccccccccccccccccccCCCCCCCCCCccccchhHHHh
Q 003897 426 GGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCND---FMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHC 502 (788)
Q Consensus 426 ggr~~l~~ay~~AL~~S~~~~F~g~~iI~CMs~~~~---~~~~~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~~~ 502 (788)
....+..+..+++|++++.+.+ ++|+.++|++.. ..|..+..++| |+|+|+++.++ ...+|+..
T Consensus 174 ~~~~~~~~~~Y~~m~~aL~~~~--~~i~~~~C~~G~~~~~~w~~~~~n~w-R~s~D~~d~w~----------~~~~i~~~ 240 (417)
T 1szn_A 174 DWSTSKSAERFGAMRNALAKQS--HEIVLSMCIWGQADVFSWGNSTGISW-RMSDDISPNWG----------SVTRILNL 240 (417)
T ss_dssp CGGGSHHHHHHHHHHHHHHTSS--SCCEEEECCTTGGGHHHHGGGTCSEE-ECSSCCCSSHH----------HHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHhC--CCEEEEeCCCCCCcchhhHhhcccce-eecCCccccHH----------HHHHHHHH
Confidence 1112134566778999888884 468888877532 34666778899 99999998754 11244332
Q ss_pred -hhhhhcccCCccCCcccccccC-----cchHHHHHHHHHcCCCeEEeeCCCCCC---hhhhh--hhh--CCCC---cee
Q 003897 503 -AYNSLWMGNFIHPDWDMFQSTH-----PCAEFHAASRAISGGPIYVSDCVGKHN---FPLLK--RLS--MPDG---SIL 566 (788)
Q Consensus 503 -a~Nsl~~g~~~~PDwDMF~S~h-----~~a~~HAaaRaisGgPVyvSD~pg~hd---~~lL~--~lv--~pdG---~il 566 (788)
++...+.+...|+|+||+...+ .+.+.|.+++|++|+|++|||.+.+-+ .++|+ .++ -+|. .-.
T Consensus 241 ~~~~~~~~~~g~~~D~DmL~vg~~~~t~~E~r~~~alwa~~gspL~ig~dl~~l~~~~~~~L~N~eviav~qd~~lg~~~ 320 (417)
T 1szn_A 241 NSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLSQNNINLLKNKHLLAFNQDSVYGQPA 320 (417)
T ss_dssp HHTCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHTCHHHHHHHTCSSCCSCC
T ss_pred HhhhcccccCccccCCcccccCCCCCCHHHHHHHHHHHHHhCCceEecCCcccCCHHHHHHhcChHHHhhccccccCcce
Confidence 2444445557899999997643 355799999999999999999887655 55665 222 1443 211
Q ss_pred cccccCccCccccccccCCCCcceEEEEe--cCCcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCC
Q 003897 567 RCEYYALPTRDCLFADPLHDGKTMLKIWN--LNKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSG 644 (788)
Q Consensus 567 R~~~pg~pt~D~lf~dp~~d~~~lLki~n--~~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~ 644 (788)
|+-..+. .+|-.|. .++. +-||. +..+ -+|++||..+. +.+-.+...+++ |
T Consensus 321 ~~v~w~~-~p~~~~~---~~~~--~~vw~~~l~~g-~~v~l~N~~~~-----------------~~~~~~~~~~l~---g 373 (417)
T 1szn_A 321 TPYKWGI-NPDWTFN---VTYP--AEFWAGPSSKG-HLVLMVNTLDI-----------------TATKEAKWNEIP---G 373 (417)
T ss_dssp EEEECSS-SCTTCCC---SSSC--CCEEEECCTTC-EEEEEECCSSS-----------------CEEEEECGGGST---T
T ss_pred EEeeccc-ccccccC---CCCC--ccEEEEEcCCC-cEEEEEECCCC-----------------ceeEEeCHHHcC---C
Confidence 2111010 0111111 1111 23444 3334 68999996431 122234445552 1
Q ss_pred CCCcccCCceeEEEEEecccEEEecCCCCcEEEEecCCcEEEEEEEee
Q 003897 645 KNPISIEGVQVFAMYLQEAKKLVLSKPYENIEISLEPFSFELITVSAV 692 (788)
Q Consensus 645 ~~~~~~~~~~~~~vy~~~sg~l~~l~~~~~~~v~L~~~~~ei~t~~Pv 692 (788)
.. . ..|-|+..-+++-.-. ...++++|++.+.-+|.+.|.
T Consensus 374 l~-----~-~~~~v~DlW~~~~~g~--~~~~~~~v~~h~~~l~~l~~~ 413 (417)
T 1szn_A 374 LS-----A-GHYEVRDVWSDKDLGC--LSSYKAAVAAHDTAVILVGKK 413 (417)
T ss_dssp CC-----S-SEEEEEETTTTEEEEE--ESSEEEEECTTCEEEEEEEEE
T ss_pred CC-----C-CceEEEECcCCCcccc--cceEEEEECCCeEEEEEEEcc
Confidence 00 1 1788998877774333 467999999999999999885
No 6
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=99.98 E-value=2.8e-31 Score=294.90 Aligned_cols=349 Identities=17% Similarity=0.174 Sum_probs=226.0
Q ss_pred CcccccccccccccCHHHHHHHHHHhHhCCCC---CcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC-
Q 003897 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN- 294 (788)
Q Consensus 219 ~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an- 294 (788)
.||||||++|++++||+.|++.++.+++.|++ .++|+||||||...++.. .+|.++
T Consensus 10 p~gwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~--------------------G~~~~~~ 69 (397)
T 3a5v_A 10 QMGWNTWNKYGCNVDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESS--------------------KTLLADP 69 (397)
T ss_dssp CEEEESHHHHGGGCCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTT--------------------SCCCBCT
T ss_pred CEEEECHHHhCcCCCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCC--------------------CCeEECh
Confidence 48999999999999999999999999995533 359999999997544321 235555
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCccccccccc
Q 003897 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (788)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a 374 (788)
+||| +||++++++||++ | +| +|+|+.. .. .++ ...||+.
T Consensus 70 ~kFP-------------~Gl~~l~~~i~~~-G-lk-~Giw~~p---------g~-----~tc----~~~pg~~------- 108 (397)
T 3a5v_A 70 TKFP-------------RGIKPLVDDIHNL-G-LK-AGIYSSA---------GT-----LTC----GGHIASL------- 108 (397)
T ss_dssp TTCT-------------TCHHHHHHHHHHT-T-CE-EEEEEES---------SS-----BCT----TSCBCCT-------
T ss_pred hcCC-------------cCHHHHHHHHHHc-C-CE-EEEEecC---------CC-----Ccc----CCCHHHH-------
Confidence 7899 7999999999998 8 99 8999873 21 111 1123332
Q ss_pred ccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCCceee
Q 003897 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIA 454 (788)
Q Consensus 375 ~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~ 454 (788)
.|++..++++++|||||||+|++...... +...+..+.+++|.+++.+.+ ++|+.
T Consensus 109 ------------------~~~~~~~~~~~~wGvdyvK~D~~~~~~~~-----~~~~~~~~~y~~m~~~L~~~~--~~i~~ 163 (397)
T 3a5v_A 109 ------------------GYEDIDAKTWAKWGIDYLKYDNCYNQGQS-----GTPKLSYDRYKAMGNALNKTG--RPMLY 163 (397)
T ss_dssp ------------------TCHHHHHHHHHHHTCCEEEEECTTCTTCC-----SSHHHHHHHHHHHHHHHHHTC--SCCEE
T ss_pred ------------------HHHHHHHHHHHHcCCCEEEECCCcCCCcC-----CCcchhHHHHHHHHHHHHhhC--CCcEE
Confidence 23444467889999999999998654321 222333445578988888885 46888
Q ss_pred ecCCCc-c--ccccccccccccccccccccCCCCC---CC-----CCCccccchhHHHhh----hhhhcccCCccCCccc
Q 003897 455 SMEHCN-D--FMLLGTEAIALGRVGDDFWCTDPSG---DP-----NGTFWLQGCHMVHCA----YNSLWMGNFIHPDWDM 519 (788)
Q Consensus 455 CMs~~~-~--~~~~~~~~~~~~R~SDDf~p~dp~~---~p-----~w~~~sh~~Hi~~~a----~Nsl~~g~~~~PDwDM 519 (788)
++|++. + ..|..+..++| |+|+|++|++..- |+ -.+ .++..++.+++ ..+-+.++..|+|+||
T Consensus 164 ~~c~~G~~~~~~w~~~~~n~w-R~s~Di~~~w~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~pg~~nD~Dm 241 (397)
T 3a5v_A 164 SLCNWGEDGPWNFASTISNSW-RISGDVYDNFNRPDPACPCTTYDCVL-AGFRCSVMNIINKAVAVSQKARSGGWNDLDM 241 (397)
T ss_dssp EECSTTTTCHHHHSTTTCSEE-ECSSCBCSCSSCCCTTSCCCSSCCSC-CCSCBCHHHHHHHHHHHGGGCBTTBEEECCC
T ss_pred EeccCCCCchhhHHhhcCcEE-EEcCCcCCcccccccccccccccccc-ccccchHHHHHHHhhhhHhhcCCCccCCccc
Confidence 888853 2 24666778888 9999999875511 00 000 12223444443 2233446679999999
Q ss_pred ccccC-----cchHHHHHHHHHcCCCeEEeeCCCCCC---hhhhh-hhhC---CC--CceecccccCccCccccccccCC
Q 003897 520 FQSTH-----PCAEFHAASRAISGGPIYVSDCVGKHN---FPLLK-RLSM---PD--GSILRCEYYALPTRDCLFADPLH 585 (788)
Q Consensus 520 F~S~h-----~~a~~HAaaRaisGgPVyvSD~pg~hd---~~lL~-~lv~---pd--G~ilR~~~pg~pt~D~lf~dp~~ 585 (788)
+...+ .+.+.|.+++|++++|+++||...+.+ .+||+ +-++ +| |. ++++. + .
T Consensus 242 l~vg~~~lt~~E~~~~~alwai~~sPL~~g~Dl~~~~~~~~~il~N~e~iai~qd~~g~------~~~~v----~----~ 307 (397)
T 3a5v_A 242 LEVGNGGMNQEEYRVHYTIWAALKSPLILGNDVTNITNTTKEIIMNKEVIAVNQDSSFS------PANRI----W----V 307 (397)
T ss_dssp BCTTSSSSCHHHHHHHHHHHHHTTCCEEECSCSSSCCHHHHHHHCCHHHHHHHTCTTCC------CCEEE----E----E
T ss_pred cccCCCCCCHHHHHHHHHHHHHhcCceEecCchhhCCHHHHHHhcCHHHHhhccccccc------cceee----e----c
Confidence 99864 345779999999999999998877776 44454 2221 34 21 11111 1 1
Q ss_pred CCcceEEEEec--CCcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCCCCCcccCCceeEEEEEecc
Q 003897 586 DGKTMLKIWNL--NKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYLQEA 663 (788)
Q Consensus 586 d~~~lLki~n~--~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~~vy~~~s 663 (788)
.+. +-||.. ..+.-+||+||..... .+++ |..+++..-.. ... .....|.|+..=+
T Consensus 308 ~g~--~~vw~~~l~~g~~~v~~~N~~~~~---------------~~~~--v~l~~lg~~~~-~~~--~~~~~~~v~DlW~ 365 (397)
T 3a5v_A 308 KGD--QQLFSGNLANNTQVVILLNAGDSA---------------AKMT--ATWDDIWVYNL-PNV--DSSRSIEVRDLWK 365 (397)
T ss_dssp ETT--EEEEEEEETTTEEEEEEEECSSSC---------------EEEE--EEHHHHTGGGT-TSB--CTTCCEEEEETTT
T ss_pred CCC--ceEEEEECCCCCEEEEEEECCCCC---------------eEEE--EEHHHhcCccc-ccc--CCCCceEEEECCC
Confidence 122 345554 3445689999965421 1122 22233310000 000 0123678888877
Q ss_pred cE-EEecCCCCcEEEEecCCcEEEEEEEeee
Q 003897 664 KK-LVLSKPYENIEISLEPFSFELITVSAVT 693 (788)
Q Consensus 664 g~-l~~l~~~~~~~v~L~~~~~ei~t~~Pv~ 693 (788)
++ +... ...++++|++.+.-+|.+.|+.
T Consensus 366 ~~~~g~~--~~~~~~~v~~hg~~l~~l~~~~ 394 (397)
T 3a5v_A 366 QKSLGNF--SNHITLDVPAHGVRLLKFMDSA 394 (397)
T ss_dssp TEEEEEE--CSEEEEEECTTEEEEEEESSCC
T ss_pred CCccccc--cceEEEEECCCeEEEEEEEecC
Confidence 76 3333 4578999999999999999976
No 7
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=99.98 E-value=1.7e-31 Score=295.16 Aligned_cols=342 Identities=13% Similarity=0.154 Sum_probs=217.7
Q ss_pred CcccccccccccccC----------HHHHHHHHHHhHhCCCCC---cEEEEecCCCCcCCCCCCCCccccccccccCcCc
Q 003897 219 KFGWCTWDAFYLTVQ----------PHGVMEGVKGLVDGGCPP---GLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMP 285 (788)
Q Consensus 219 ~~GWCTWdafy~~Vt----------e~~V~~~l~~L~~~Gip~---~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~ 285 (788)
.|||||||+|+++|+ |+.|++.++.|++.|+.. +||+||||||... +..
T Consensus 10 pmGWnSW~~~~~~i~~~~~~~~~~se~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~~r-d~~----------------- 71 (400)
T 4do4_A 10 PMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGGR-DAS----------------- 71 (400)
T ss_dssp CEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHSSHHHHTCCEEECCSSCEEEE-CTT-----------------
T ss_pred CCcccchHhhccccCccccccccccHHHHHHHHHHHHHCcchhhCCeEEEECCCcccCC-CCC-----------------
Confidence 489999999999985 999999999998876643 6999999999642 211
Q ss_pred ccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCC
Q 003897 286 CRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSP 364 (788)
Q Consensus 286 ~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~sp 364 (788)
.+ +.++ .||| +|||+++++||++ | +| +|+|....-++.+ ..|
T Consensus 72 G~---~~~d~~rFP-------------~G~k~ladyih~~-G-lk-~Giy~~~~~~~c~------------------g~~ 114 (400)
T 4do4_A 72 GR---LMPDPKRFP-------------HGIPFLADYVHSL-G-LK-LGIYADMGNFTCM------------------GYP 114 (400)
T ss_dssp CC---EEECTTTST-------------TCHHHHHHHHHHT-T-CE-EEEEEEBSSBCTT------------------SCB
T ss_pred CC---EeECcccCC-------------cccHHHHHHHHHC-C-ce-EEEecCCCCcccC------------------CCC
Confidence 12 4444 8899 7999999999999 8 99 7999653322211 011
Q ss_pred C-cccccccccccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHH
Q 003897 365 G-LELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASV 443 (788)
Q Consensus 365 G-~~~~~~d~a~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~ 443 (788)
| +. .+++...+.+++|||||||+|++... ......++.++..++
T Consensus 115 ~~~~-------------------------~~~~~da~~~a~wGvdylK~D~~~~~----------~~~~~~~~~~~~~~~ 159 (400)
T 4do4_A 115 GTTL-------------------------DKVVQDAQTFAEWKVDMLKLDGCFST----------PEERAQGYPKMAAAL 159 (400)
T ss_dssp CBCG-------------------------GGHHHHHHHHHHTTCCEEEEECTTCC----------HHHHHHHHHHHHHHH
T ss_pred chhH-------------------------hHHHHHHHHHHHhCCceEeeccCcCC----------hhhhhhhhhHHHHHH
Confidence 1 11 12222334569999999999997531 122345566676666
Q ss_pred HhccCCCceeeecCCCcc---------ccccccccccccccccccccCCCCCCCCCCccccchhHH-----Hhhhhhhcc
Q 003897 444 RKHFKGNGVIASMEHCND---------FMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMV-----HCAYNSLWM 509 (788)
Q Consensus 444 ~~~F~g~~iI~CMs~~~~---------~~~~~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~-----~~a~Nsl~~ 509 (788)
+++ ++.|..+.+.... ..+.....+++ |+++|+++.++ . .+.+. .+.+.+.+.
T Consensus 160 ~~~--g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-R~~~Di~~~w~--------~--~~~~~~~~~~~~~~~~~~~ 226 (400)
T 4do4_A 160 NAT--GRPIAFSCSWPAYEGGLPPRVQYSLLADICNLW-RNYDDIQDSWW--------S--VLSILNWFVEHQDILQPVA 226 (400)
T ss_dssp HHT--CSCCEEEECGGGGTTSSTTTCCHHHHHHHCSEE-ECSCCCCSSHH--------H--HHHHHHHHHHTHHHHGGGC
T ss_pred HHh--Cccceecccccccccccccccchhhcccccccc-cccCcccCccc--------c--hhhHHHHHHHHhHHhhhhc
Confidence 666 7777766553211 11223456778 99999988744 1 22222 222334445
Q ss_pred cCCccCCcccccccCc-----chHHHHHHHHHcCCCeEEeeCCCCCChhhhhhhhCCCCceecc--cccCccCccccccc
Q 003897 510 GNFIHPDWDMFQSTHP-----CAEFHAASRAISGGPIYVSDCVGKHNFPLLKRLSMPDGSILRC--EYYALPTRDCLFAD 582 (788)
Q Consensus 510 g~~~~PDwDMF~S~h~-----~a~~HAaaRaisGgPVyvSD~pg~hd~~lL~~lv~pdG~ilR~--~~pg~pt~D~lf~d 582 (788)
+...|+|+||++..+. +.+.|.+++|++++|+++++.+-+.+-+-++-|. +-.+++. +..|.+. ..++.+
T Consensus 227 ~~~~~~d~d~l~~~~~~~t~~e~~t~~slwa~~~spL~~g~Dl~~~~~~~~~lL~--N~evia~~qd~~g~~~-~~v~~~ 303 (400)
T 4do4_A 227 GPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQ--NPLMIKINQDPLGIQG-RRIHKE 303 (400)
T ss_dssp BTTBEEECCCCCTTSSSCCHHHHHHHHHHHHHTTCCEEECSCTTTCCHHHHHHHT--CHHHHHHHTCTTCCCC-EEEEEC
T ss_pred CCCCCCCCccccccCCCCCHHHHHHHHHHHHHHcCCEEecCCcccCCHHHHHHhh--ChhhhhhcccccccCc-eEeecC
Confidence 6678999999998642 5789999999999999999877766644333221 1111111 0011111 111111
Q ss_pred cCCCCcceEEEEec--CCcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCCCCCcccCCceeEEEEE
Q 003897 583 PLHDGKTMLKIWNL--NKYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYL 660 (788)
Q Consensus 583 p~~d~~~lLki~n~--~~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~~vy~ 660 (788)
.....||.. ..++-+|++||..+.. +.+-.+..+++... +...|.|+.
T Consensus 304 -----~~~~~vw~~~~~~g~~~va~~N~~~~~----------------~~~~~~~l~~lGl~---------~~~~y~vrD 353 (400)
T 4do4_A 304 -----KSLIEVYMRPLSNKASALVFFSCRTDM----------------PYRYHSSLGQLNFT---------GSVIYEAQD 353 (400)
T ss_dssp -----TTSEEEEEEECGGGCEEEEEEECCSSS----------------CEEEEEEGGGGTCC---------TTCEEEEEE
T ss_pred -----CCceEEEEEEcCCCCEEEEEEECCCCC----------------cEEEEEEHHHcCCC---------CCCeEEEEE
Confidence 122445654 3456789999965422 12233444454311 334788998
Q ss_pred ecccE-EEecCCCCcEEEEecCCcEEEEEEEeeeecC
Q 003897 661 QEAKK-LVLSKPYENIEISLEPFSFELITVSAVTLLP 696 (788)
Q Consensus 661 ~~sg~-l~~l~~~~~~~v~L~~~~~ei~t~~Pv~~~~ 696 (788)
.-+|+ +..++.+..++++|++.+..+|.++||+.+.
T Consensus 354 lw~~~~~g~~~~~~~~~~~v~phg~~l~~ltPvk~~~ 390 (400)
T 4do4_A 354 VYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLE 390 (400)
T ss_dssp TTTCCEEEEECTTCEEEEEECTTCEEEEEEEEEC---
T ss_pred CcCCceeccccCCceEEEEECCCeEEEEEEEecCccc
Confidence 76766 4556667889999999999999999999755
No 8
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=99.98 E-value=1.9e-31 Score=311.24 Aligned_cols=349 Identities=16% Similarity=0.133 Sum_probs=225.7
Q ss_pred cCcccccccccccccCHHHHHHHHHHhHhCCCC---CcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC
Q 003897 218 DKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN 294 (788)
Q Consensus 218 d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an 294 (788)
-.||||||++|++++||+.|++.++.|++.|++ .++|+||||||...++.. .++.++
T Consensus 12 ~p~gwnsw~~~~~~~~~~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~--------------------g~~~~~ 71 (614)
T 3a21_A 12 APMGWASWNSFAAKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSA--------------------GNITVD 71 (614)
T ss_dssp CCEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTT--------------------CCBCCC
T ss_pred CceEEEchhhhCccCCHHHHHHHHHHHHHcCHHhhCCEEEEECCCcCCCCcCCC--------------------CCEEEC
Confidence 358999999999999999999999998554443 359999999997544321 135555
Q ss_pred -CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccC---CCCCccccc
Q 003897 295 -FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPK---LSPGLELTM 370 (788)
Q Consensus 295 -~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~---~spG~~~~~ 370 (788)
+||| +||++++++||++ | +| +|+|+... +...+ + .+|. ..||
T Consensus 72 ~~~fP-------------~gl~~l~~~i~~~-G-lk-~gi~~~~~-----~~~~~-------~-~~p~~~~~~pg----- 117 (614)
T 3a21_A 72 TAEWP-------------GGMSAITAYIHSK-G-LK-AGIYTDAG-----KDGCG-------Y-YYPTGRPAAPG----- 117 (614)
T ss_dssp TTTST-------------TCHHHHHHHHHHT-T-CE-EEEEEESS-----SSCHH-------H-HSCSSSCCCTT-----
T ss_pred ccccC-------------CcHHHHHHHHHHC-C-Ce-eEEEecCC-----Ccccc-------c-cCCCCCCCCCc-----
Confidence 7799 7999999999998 8 99 89998743 11000 0 0111 0111
Q ss_pred ccccccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCC
Q 003897 371 EDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGN 450 (788)
Q Consensus 371 ~d~a~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~ 450 (788)
. .++.||+..++++++|||||||+|++...+. . ...++..++|++||..++.+. ++
T Consensus 118 ------------~------g~~~~~~~~~~~~~~wGvd~lK~D~~~~~~~-~---~~~~~~y~~~~~al~~~~~~~--gr 173 (614)
T 3a21_A 118 ------------S------GSEGHYDQDMLQFSTWGFDFVKVDWCGGDAE-G---LDAATTYKSISDAVGRAAATT--GR 173 (614)
T ss_dssp ------------C------SCTTCHHHHHHHHHHHTCSEEEEECHHHHHH-T---CCHHHHHHHHHHHHHHHHHHH--SC
T ss_pred ------------h------hhHHHHHHHHHHHHHcCCcEEEecccCCccc-c---cchHHHHHHHHHHHHHHHHhc--CC
Confidence 0 0346778888999999999999999865332 1 123455667888887665544 88
Q ss_pred ceeeecCCCcc---ccccccccccccccccccccCCCCCCCCCCccccchhHHHhh-hhh-hcccCCccCCcccccccCc
Q 003897 451 GVIASMEHCND---FMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCA-YNS-LWMGNFIHPDWDMFQSTHP 525 (788)
Q Consensus 451 ~iI~CMs~~~~---~~~~~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~~~a-~Ns-l~~g~~~~PDwDMF~S~h~ 525 (788)
+|+.|||++.. ..|.....++| |+++|+++.+. .| +-..++...+ .++ +..++..|||+||+...+.
T Consensus 174 ~i~~s~c~~g~~~~~~~~~~~~~~w-R~~~Di~~~~~--~~-----~~~~~~~~~~~~~~~~~~~pg~~nD~Dml~~g~~ 245 (614)
T 3a21_A 174 PLTLSICNWGYQNPWNWAAGQAPLW-RTSTDIIYYGN--QP-----SMTSLLSNFDQTLHPTAQHTGYYNDPDMLMVGMD 245 (614)
T ss_dssp CCEEEECCTTTTCGGGTCTTTCSEE-ECSSCSCCTTS--CC-----CHHHHHHHHHHHCCTTTCBTTBEEECCSCCTTCT
T ss_pred CeEEEecCCccCChhhhhhccCccc-ccccccccccc--cC-----chHHHHHHHHHhhhHHhhCCCcccCCCeeeeCCC
Confidence 99999998742 23444666788 99999983321 11 1112333322 222 3366789999999998754
Q ss_pred -----chHHHHHHHHHcCCCeEEeeCCCCCChhhhhhh----h---CCCCceecccccCccCccccccccCCCCcceEEE
Q 003897 526 -----CAEFHAASRAISGGPIYVSDCVGKHNFPLLKRL----S---MPDGSILRCEYYALPTRDCLFADPLHDGKTMLKI 593 (788)
Q Consensus 526 -----~a~~HAaaRaisGgPVyvSD~pg~hd~~lL~~l----v---~pdG~ilR~~~pg~pt~D~lf~dp~~d~~~lLki 593 (788)
+.+.|++++|++++||++||.+.+++.+.|+-| + .+|-. -..+++.. .++ +. +-|
T Consensus 246 ~~t~~e~~~~~alwai~~sPL~~g~Dl~~~~~~~~~il~n~e~ia~~qd~~----g~~~~~v~----~~~---~~--~~v 312 (614)
T 3a21_A 246 GFTAAQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPEVIAVDQDSR----GLQGVKVA----EDT---TG--LQA 312 (614)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEECSCGGGCCHHHHHHHTCHHHHHHHTCTT----CCCCEEEE----EEE---TT--EEE
T ss_pred CCCHHHHHHHHHHHHHHcCccEecCCcccCCHHHHHHhcChHHhhhccccc----CCCcEEEE----ecC---CC--eEE
Confidence 567899999999999999999999885543322 1 13310 01122211 111 11 335
Q ss_pred Eec--C-CcceEEEEeecCCCCccccccccccccccccceeeeecCCcccccCCCCCcccCCceeEEEEEecccE-EEec
Q 003897 594 WNL--N-KYTGVIGAFNCQGGGWCREARRNTCASQFSQKVTAKTNPNDIEWNSGKNPISIEGVQVFAMYLQEAKK-LVLS 669 (788)
Q Consensus 594 ~n~--~-~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~~vy~~~sg~-l~~l 669 (788)
|.. . .+.-+||+||..... .++ .+..+++... + ..|.|+..-+++ +...
T Consensus 313 w~~~l~~~g~~~v~~~N~~~~~---------------~~~--~~~l~~lg~~---------~-~~~~v~dlw~~~~~~~~ 365 (614)
T 3a21_A 313 YGKVLSGTGNRAVVLLNRTSAA---------------HDI--TVRWSDLGLT---------N-ASATVRDLWARQNVGTS 365 (614)
T ss_dssp EEEECSSSSCEEEEEEECSSSC---------------EEE--EEEHHHHTBC---------S-SCEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCcEEEEEEECCCCC---------------EEE--EEEHHHhCCC---------C-CceEEEECCCCCccccc
Confidence 543 3 345689999965421 112 2333344200 1 257787776763 3322
Q ss_pred CCCCcEEEEecCCcEEEEEEEeeee
Q 003897 670 KPYENIEISLEPFSFELITVSAVTL 694 (788)
Q Consensus 670 ~~~~~~~v~L~~~~~ei~t~~Pv~~ 694 (788)
...++++|++.+.-+|.+.|...
T Consensus 366 --~~~~~~~v~~h~~~~~~l~~~g~ 388 (614)
T 3a21_A 366 --ATGYTASVPAGGSVMLTVTGGTE 388 (614)
T ss_dssp --SSEEEEEECTTCEEEEEEESCCB
T ss_pred --cceEEEEECCCeEEEEEEcCCCC
Confidence 46789999999999999998763
No 9
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=99.97 E-value=3.1e-30 Score=289.46 Aligned_cols=293 Identities=19% Similarity=0.233 Sum_probs=192.0
Q ss_pred CcccccccccccccCHHHHHHHHHHhHhCCCCC---cEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC-
Q 003897 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPP---GLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN- 294 (788)
Q Consensus 219 ~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~---~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an- 294 (788)
.||||||++|+++|||+.|++.++.|++.|++. +||+||||||.. ++.. .++.++
T Consensus 31 pmGWNSW~~~~~~i~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~~-rd~~--------------------G~~~~d~ 89 (479)
T 3lrk_A 31 QMGWDNWNTFACDVSEQLLLDTADRISDLGLKDMGYKYIILDDCWSSG-RDSD--------------------GFLVADE 89 (479)
T ss_dssp CEEEESHHHHTTCCCHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEEE-ECTT--------------------SCEEECT
T ss_pred ceEEEchHhhCcCCCHHHHHHHHHHHHhcCccccCceEEEECCccccc-cCCC--------------------CCEecCh
Confidence 499999999999999999999999999976543 699999999972 2211 124555
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCccccccccc
Q 003897 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (788)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a 374 (788)
+||| +|||+++++||++ | +| +|+|.. |.. .++ ...||+.++
T Consensus 90 ~kFP-------------~Glk~Lad~ih~~-G-lK-fGIw~~---------pG~-----~tC----~~~pGsl~~----- 130 (479)
T 3lrk_A 90 QKFP-------------NGMGHVADHLHNN-S-FL-FGMYSS---------AGE-----YTC----AGYPGSLGR----- 130 (479)
T ss_dssp TTCT-------------TCHHHHHHHHHHT-T-CE-EEEEEE---------SSS-----BCT----TSSBCCTTC-----
T ss_pred hhcC-------------CCHHHHHHHHHHC-C-Ce-eEEEec---------Ccc-----ccc----cCCCchhHH-----
Confidence 7899 7999999999999 8 99 899965 432 122 123444332
Q ss_pred ccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCCceee
Q 003897 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIA 454 (788)
Q Consensus 375 ~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~ 454 (788)
++...+.+++|||||||+|+|..... . +..+....-+.+|.+++++. ||.|++
T Consensus 131 --------------------~~~da~~fa~WGVDylK~D~c~~~~~----~-~~~~~~~~~y~~m~~AL~~t--GRpI~~ 183 (479)
T 3lrk_A 131 --------------------EEEDAQFFANNRVDYLKYDNCYNKGQ----F-GTPEISYHRYKAMSDALNKT--GRPVFY 183 (479)
T ss_dssp --------------------HHHHHHHHHHTTCCEEEEECTTCTTC----C-SSHHHHHHHHHHHHHHHHHH--CSCCEE
T ss_pred --------------------HHHHHHHHHHhCCcEEEEccCCCccc----c-CCcchhHHHHHHHHHHHHHh--CCCeEE
Confidence 22334567999999999999864211 1 12222333445566666555 999999
Q ss_pred ecCCCcc---ccccccccccccccccccccCCCCC---CC------------CCCccccchhHHH-hhhhhhcccCCccC
Q 003897 455 SMEHCND---FMLLGTEAIALGRVGDDFWCTDPSG---DP------------NGTFWLQGCHMVH-CAYNSLWMGNFIHP 515 (788)
Q Consensus 455 CMs~~~~---~~~~~~~~~~~~R~SDDf~p~dp~~---~p------------~w~~~sh~~Hi~~-~a~Nsl~~g~~~~P 515 (788)
++|+++. ..|..+..++| |+++|+++.+... || ||. .-.++++ ++..+-+.++..|+
T Consensus 184 Slc~Wg~~~~~~w~~~~~n~W-R~s~DI~d~W~~~~~~~~~~~~~~~~~~~g~~~---sv~~i~~~~~~~~~~agpG~wN 259 (479)
T 3lrk_A 184 SLCNWGQDLTFYWGSGIANSW-RMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHC---SIMNILNKAAPMGQNAGVGGWN 259 (479)
T ss_dssp EECSTTTTTHHHHSTTTCSEE-ECSSCBCSCSSCCCTTSCSCTTCSSCSCCCSCB---CHHHHHHHHGGGGGGCBTTBEE
T ss_pred EeccCccCchhhhhhhhCCee-eecCCccccccccccccccccccccccccccch---hHHHHHHHhhhhhhccCCCCCC
Confidence 9999743 23455678888 9999998875421 10 110 0122222 22334456778999
Q ss_pred CcccccccC-----cchHHHHHHHHHcCCCeEEeeCCCCCC---hhhhh-hhhC---CC--CceecccccCccCcccccc
Q 003897 516 DWDMFQSTH-----PCAEFHAASRAISGGPIYVSDCVGKHN---FPLLK-RLSM---PD--GSILRCEYYALPTRDCLFA 581 (788)
Q Consensus 516 DwDMF~S~h-----~~a~~HAaaRaisGgPVyvSD~pg~hd---~~lL~-~lv~---pd--G~ilR~~~pg~pt~D~lf~ 581 (788)
|+||+...+ .+.+.|.+++|+.+.|++|++..-+-+ .+||+ +-|+ +| |.- |++...-...
T Consensus 260 DpDML~vGn~glT~~E~rthfslWai~~SPLiiG~DL~~~~~~tl~iLtN~evIAINQD~lG~q------~~~v~~~~~~ 333 (479)
T 3lrk_A 260 DLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGANVNNLKASSYSIYSQASVIAINQDSNGIP------ATRVWRYYVS 333 (479)
T ss_dssp ECCSBCTTSTTCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHTCHHHHHHHTCTTCCC------CEEEEEEECS
T ss_pred CCCeEeeCCCCCCHHHHHHHHHHHHHHcCceEecCCcccCCHHHHHHhcCHHHHHHhccccCCc------eEEEeeccCc
Confidence 999999875 478999999999999999996654444 56666 4443 55 321 2211100000
Q ss_pred --ccCCCCcceEEEEec--CCcceEEEEeecCC
Q 003897 582 --DPLHDGKTMLKIWNL--NKYTGVIGAFNCQG 610 (788)
Q Consensus 582 --dp~~d~~~lLki~n~--~~~~gvlg~FN~~g 610 (788)
|...++ -+-||.. ..+.-+|++||...
T Consensus 334 ~~d~~~~~--~~~VW~~~l~~G~~aValfN~~~ 364 (479)
T 3lrk_A 334 DTDEYGQG--EIQMWSGPLDNGDQVVALLNGGS 364 (479)
T ss_dssp CCCTTSCC--EEEEEEEECTTSCEEEEEEECSS
T ss_pred cccccCCC--CcEEEEEECCCCCEEEEEEECCC
Confidence 111122 3556664 45566999999654
No 10
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=99.90 E-value=1.9e-21 Score=230.82 Aligned_cols=377 Identities=14% Similarity=0.144 Sum_probs=213.3
Q ss_pred eCCeEEEecCCCCCcEEEEEEcCCc----cccc-cccc-eEEEEEecCChHHHHHHHHHH-HHHhhccCCCCCCCCCCCc
Q 003897 144 EGPFRASLQPGADDYVDVCVESGST----KVTG-DSFR-SVVYVHLGDDPFKLVKDAMRV-VRSHLGTFKLLDEKTPPPI 216 (788)
Q Consensus 144 ~~~~~~~L~~~~~~~~~i~~~sg~~----~v~~-~~~~-~~~~v~~g~dp~~~i~~A~~~-~~~~~~tf~~~~~k~~P~~ 216 (788)
.|+++..+..+..+...+...-... ..++ .++. ..+++..+++=+.-+.+++.. +|.++..-+. ..+++
T Consensus 254 sGn~~~~~e~~~~~~~~~~~G~~~~~~~~~L~pGesf~tp~~~~~~s~~g~~~~s~~~h~~~r~~~~~~~~-~~~~r--- 329 (729)
T 4fnq_A 254 SGNFLAQVEVDQFHTARVSMGINPFDFTWLLQPGESFQTPEVVMVYSDQGLNGMSQTYHELYRTRLARGAF-RDRER--- 329 (729)
T ss_dssp SSCEEEEEEECTTCCEEEEEEECCTTCCEEECTTCEEECCCEEEEEESBHHHHHHHHHHHHHHHHTSCSTT-TTSCC---
T ss_pred CCCceEEEEEcCCCCEEEEEeecCCCCcEEECCCCEEEeeEEEEEEEcCCHHHHHHHHHHHHHHhcCCCcc-cccCc---
Confidence 6788888877665554444321110 0111 0111 123344444446666666554 5555322111 12223
Q ss_pred ccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccC-C
Q 003897 217 VDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-F 295 (788)
Q Consensus 217 ~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an-~ 295 (788)
+++||||+++|+++||++|++.++.+++.|+. +++||||||...++.. ..+.++.++ +
T Consensus 330 --Pv~~NsW~a~~~d~~e~~i~~~ad~aa~lG~e--~fviDDGWf~~r~~d~-----------------~~lGdW~~d~~ 388 (729)
T 4fnq_A 330 --PILINNWEATYFDFNEEKLVNIAKTEAELGIE--LFVLDDGWFGKRDDDR-----------------RSLGDWIVNRR 388 (729)
T ss_dssp --CCEEECSTTTTTCCCHHHHHHHHHHHHHHTCC--EEEECSCCBTTCCSTT-----------------SCTTCCSBCTT
T ss_pred --eeEEcccccccccCCHHHHHHHHHHHHhcCcc--EEEEcceeecCCCCCc-----------------ccCCcEEEChh
Confidence 48999999999999999999999999999996 9999999998654321 235667766 7
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccccc
Q 003897 296 KFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAV 375 (788)
Q Consensus 296 KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a~ 375 (788)
||| +|||+++++||++ | +| +|+|..+. -+.|++ .+. ..+||+..
T Consensus 389 kFP-------------~Glk~Lad~vh~~-G-mk-fGLW~epe----~v~~~S-------~l~---------~~hPdw~~ 432 (729)
T 4fnq_A 389 KLP-------------NGLDGLAKQVNEL-G-MQ-FGLWVEPE----MVSPNS-------ELY---------RKHPDWCL 432 (729)
T ss_dssp TCT-------------THHHHHHHHHHHT-T-CE-EEEEECTT----EECSSS-------HHH---------HHCGGGBC
T ss_pred hcC-------------ccHHHHHHHHHHC-C-CE-EEEEeecc----ccCCCc-------HHH---------HhCchhee
Confidence 899 7999999999998 8 99 79995432 122332 221 11222222
Q ss_pred cc-----eec---cCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhccc---CCcch----hHHHHHHHHH
Q 003897 376 DK-----IVN---NGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENY---GGRVD----LAKAYYKALT 440 (788)
Q Consensus 376 ~~-----i~~---~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~---ggr~~----l~~ay~~AL~ 440 (788)
.. ... ..+++.+|+....+++.+.+.+++|||||||+|.+..+...+... ....+ ..++|++.++
T Consensus 433 ~~~~~~~~~~r~q~~LD~~~P~v~~y~~~~i~~ll~~~GidYiK~D~n~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~d 512 (729)
T 4fnq_A 433 HVPNRPRSEGRNQLVLDYSREDVCDYIIETISNVLASAPITYVKWDMNRHMTEIGSSALPPERQRETAHRYMLGLYRVMD 512 (729)
T ss_dssp CCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTTTCCEEEEECCCCCCSCCCTTSCGGGGGGHHHHHHHHHHHHHH
T ss_pred ccCccCCccCCccccccCCChhHHHHHHHHHHHHHHHCCCCEEEEcCCCCCCcCCCCCCCcccchhHHHHHHHHHHHHHH
Confidence 10 000 014556665544557888899999999999999875443222111 01112 2345555554
Q ss_pred HHHHhccCCCceeeecCCCcccccc-ccccccccccccccccCCCCCCCCCCccccchhHHHhhhhhhccc--CC--ccC
Q 003897 441 ASVRKHFKGNGVIASMEHCNDFMLL-GTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMG--NF--IHP 515 (788)
Q Consensus 441 ~S~~~~F~g~~iI~CMs~~~~~~~~-~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~~~a~Nsl~~g--~~--~~P 515 (788)
+ +.+.||+--+.+|-+.....-+. ..+...+ +.|||..+. .+..|. ...+++.- .. ..+
T Consensus 513 ~-L~~~~P~i~ie~C~~Gg~r~d~~~l~~~~~~-w~SD~~d~~------------~r~~i~--~g~s~~~p~~~~g~hv~ 576 (729)
T 4fnq_A 513 E-MTSRFPHILFESCSGGGGRFDPGMLYYMPQT-WTSDNTDAV------------SRLKIQ--YGTSLVYPISAMGAHVS 576 (729)
T ss_dssp H-HHHHCTTCEEEEEBTBBTTCSHHHHTTSSEE-ECBSCCCHH------------HHHHHH--HHHTTTSCGGGEEEEEE
T ss_pred H-HHHHCCCcEEEcccCCCCCccchhhhcccce-eecCCcchH------------HHHHHH--hchhcccCchhcccCcc
Confidence 4 66777876677787766543221 2334444 556544222 112221 12233321 11 123
Q ss_pred CcccccccCcchHHHHHHHHHcCCCeEEeeCCCC---CChhhhhhhhC---------CCCceecccccCccCcccccccc
Q 003897 516 DWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGK---HNFPLLKRLSM---------PDGSILRCEYYALPTRDCLFADP 583 (788)
Q Consensus 516 DwDMF~S~h~~a~~HAaaRaisGgPVyvSD~pg~---hd~~lL~~lv~---------pdG~ilR~~~pg~pt~D~lf~dp 583 (788)
|.++-++. ....++..+++...||+.++..+-+ ...++||+++. ..|...|... |
T Consensus 577 ~~~~~~~g-r~t~~e~r~~~al~g~l~~~~dl~~ls~e~~~~lk~~Ia~yK~~r~li~~G~~~rl~~------------p 643 (729)
T 4fnq_A 577 AVPNHQVG-RVASLKARGHVAMSGNFGYELDITKLTETEKQMIKQQVAFYKDVRRLVQFGTFYRLLS------------P 643 (729)
T ss_dssp CSSCSSSC-CCCCHHHHHHHHTTSEEEEESCGGGCCHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEC------------T
T ss_pred CCcccCCc-CcchHHHHHHHHHHhhcccccCcccCCHHHHHHHHHHHHHHHHHHHHHhCceEEecCC------------C
Confidence 33332322 1234566667677899999976554 45777876652 3577777642 2
Q ss_pred CCCCcceEEEEecCCcceEEEEeecCC
Q 003897 584 LHDGKTMLKIWNLNKYTGVIGAFNCQG 610 (788)
Q Consensus 584 ~~d~~~lLki~n~~~~~gvlg~FN~~g 610 (788)
..++....-.-+-++..+|+.+||...
T Consensus 644 ~~~~~~~~~~v~~d~~~avv~~~~~~~ 670 (729)
T 4fnq_A 644 FEGNEAAWMFVSADRSEALVAYFRVLA 670 (729)
T ss_dssp TSSSEEEEEEECTTSSEEEEEEEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEEEecCC
Confidence 222222222223345568999999643
No 11
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=99.87 E-value=1.8e-20 Score=222.40 Aligned_cols=286 Identities=15% Similarity=0.195 Sum_probs=170.4
Q ss_pred cceEEEEEcCCC--C-CccEEEEEEeeeCCeEEEecCCCCCcEEEEEEcCC----ccccccc-cc-eEEEEEecCChHHH
Q 003897 120 ETQLVILDNSTD--T-GRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGS----TKVTGDS-FR-SVVYVHLGDDPFKL 190 (788)
Q Consensus 120 etq~ll~~~~~~--~-~~~y~vlLp~~~~~~~~~L~~~~~~~~~i~~~sg~----~~v~~~~-~~-~~~~v~~g~dp~~~ 190 (788)
...|+++..++. + +-.|.+.|.- .|+++..+..+..+...+...-.. -..+..+ +. ..+++..+++.++.
T Consensus 232 ~~P~~~l~~~~~~e~~G~~~g~~l~~-sG~~~~~~~~~~~~~~~v~~g~~~~~~~~~L~pGe~~~tP~~~~~~s~~g~~~ 310 (732)
T 2xn2_A 232 MNPFMALVDHDTNEFXGEAYGFALAY-SGNHKFEVERDQFGQIHVNTGINDYNFKWKLNPNEEFQTPEVLMVYSDQGLNK 310 (732)
T ss_dssp BCSEEEEECTTCCSSSBCEEEEEECC-SSCEEEEEEECTTSCEEEEEEECCTTCCEEECTTCEEECCCEEEEEESBCHHH
T ss_pred CCcEEEEecCCCCcccceEEEEEEec-CCcEEEEEEEcCCCeEEEEEEEcCCCCceEecCCCeEEeeEEEEEEecCCHHH
Confidence 455666665441 1 2234444433 677888777665554444333211 0111111 11 12334445556787
Q ss_pred HHHHHHH-HHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCC
Q 003897 191 VKDAMRV-VRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDP 269 (788)
Q Consensus 191 i~~A~~~-~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~ 269 (788)
|.+++.. ++.++...+.. ++.| ++|||||+++++++||++|++.++.+++.|+. +|+||||||....+..
T Consensus 311 ~s~~~~~l~~~~~~~~~~~--~~~~----p~~wnsW~~~~~~~~ee~v~~~ad~~~~~G~~--~~viDDGW~~~r~~~~- 381 (732)
T 2xn2_A 311 MSQAFHSLIHERIMRSKFK--DQIR----PVLVNNWEATYFDFNEDKLKTIVDKAKKLGLE--MFVLDDGWFGHRDDDN- 381 (732)
T ss_dssp HHHHHHHHHHHHTCCCTTT--TSCC----CCEEECHHHHTTCCCHHHHHHHHHHHHHTTCC--EEEECSSSBTTCSSTT-
T ss_pred HHHHHHHHHHHhcCCCccc--cCCC----CeEEEchhhhccCCCHHHHHHHHHHHHHcCCc--EEEEcCcccccCCCCc-
Confidence 8777765 66654332211 1222 57999999999999999999999999999985 9999999997533211
Q ss_pred CCccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCC
Q 003897 270 IDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNI 348 (788)
Q Consensus 270 ~~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~ 348 (788)
..+.+|..+ +||| +||++++++||++ | +| +++|+.+. .|.|++
T Consensus 382 ----------------~~~Gd~~~d~~kFP-------------~Glk~lv~~ih~~-G-lk-~GlW~~P~----~v~~~S 425 (732)
T 2xn2_A 382 ----------------SSLGDWKVYKKKFP-------------NGLGHFADYVHEQ-G-LK-FGLWFEPE----MISYES 425 (732)
T ss_dssp ----------------SCTTCCSBCTTTCT-------------TCHHHHHHHHHHT-T-CE-EEEEECTT----EECSSS
T ss_pred ----------------cccCceeeCchhcC-------------ccHHHHHHHHHHc-C-CE-EEEEeCcc----ccCCCC
Confidence 124456665 6799 6999999999998 8 99 89998763 355655
Q ss_pred CCCCCcceeeccCCCCCcccccccccccceeccCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhccc-C-
Q 003897 349 PGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENY-G- 426 (788)
Q Consensus 349 ~~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~-g- 426 (788)
+.+++....+ ...+|... .+...+ ..+++.+|+....|++.+.+++++|||||||+|++..+...+... .
T Consensus 426 ~l~~~hpdw~--~~~~g~~~---~~~~~~---~~LD~t~Pev~~~i~~~l~~~~~~~GVD~~K~D~~~~~~~~~~~~~~~ 497 (732)
T 2xn2_A 426 NLYKEHPDYL--XHVPGRKP---CPSRNQ---YVLELGRKEVRDNIFEQMVKILDSKKIDYIKWDMNRSLSDIYESDLPA 497 (732)
T ss_dssp HHHHHCGGGB--CCCTTSCC---CCBTTB---EEBCTTSHHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCSCCCTTSCG
T ss_pred HHHHhCchhe--ecCCCCCC---ccCCce---EEEcCCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccccccCCCCCCc
Confidence 3221111000 01111100 000011 125667777666679999999999999999999986543222111 0
Q ss_pred -CcchhHHHHHHHH---HHHHHhccCCCceeeecCCC
Q 003897 427 -GRVDLAKAYYKAL---TASVRKHFKGNGVIASMEHC 459 (788)
Q Consensus 427 -gr~~l~~ay~~AL---~~S~~~~F~g~~iI~CMs~~ 459 (788)
...+..++|.+++ -+++++.|++.-+..|++..
T Consensus 498 ~~~~~~~~~y~~~~y~~~~~l~~~~p~i~~~~C~~Gg 534 (732)
T 2xn2_A 498 DQQGEAYHRYVLGYYDLLNKLVTRYPDILFEGCSGGG 534 (732)
T ss_dssp GGGGGHHHHHHHHHHHHHHHHHHHCTTSEEEECBTBB
T ss_pred cchhhHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcc
Confidence 1123445565432 24677787776667787754
No 12
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=99.83 E-value=1.2e-18 Score=206.54 Aligned_cols=280 Identities=15% Similarity=0.197 Sum_probs=159.6
Q ss_pred cceEEEEEcCCC--C-CccEEEEEEeeeCCeEEEecCCCCCcEEEEEEcCC----cccccc-cc-ceEEEEEecCChHHH
Q 003897 120 ETQLVILDNSTD--T-GRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGS----TKVTGD-SF-RSVVYVHLGDDPFKL 190 (788)
Q Consensus 120 etq~ll~~~~~~--~-~~~y~vlLp~~~~~~~~~L~~~~~~~~~i~~~sg~----~~v~~~-~~-~~~~~v~~g~dp~~~ 190 (788)
...|+++..++. + |-.|.+.|.- .|+++..+..+..+...+...-.. -..+.. ++ ...+++..+.+-++.
T Consensus 228 ~~P~~~l~~~~~~e~~G~~~g~~l~~-sG~~~~~~~~~~~~~~~v~~g~~~~~~~~~L~pGe~~~tp~~~~~~~~~gl~~ 306 (720)
T 2yfo_A 228 YNPAVILAEKGTTETAGSCYGMLFVY-SGNFSCEAEKDQFNQTRLLLGLNEELFSYPLASGETFTVPEVILSYSAEGLSA 306 (720)
T ss_dssp BCSEEEEEETTCCSSSBCEEEEEECC-SSCEEEEEEECTTSCEEEEEESCSTTCCEEECTTCEEEEEEEEEEEESBCHHH
T ss_pred CCcEEEEecCCCCcccceEEEEEEec-CCcEEEEEEEcCCCeEEEEEeecCcCcceEeCCCCeEEeeEEEEEEecCCHHH
Confidence 455666655441 1 2235554433 678887777665555444433211 111111 12 123444444333556
Q ss_pred HHHHHHH-HHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCC
Q 003897 191 VKDAMRV-VRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDP 269 (788)
Q Consensus 191 i~~A~~~-~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~ 269 (788)
|.+++.. +++++.. +..+ .-...+|||||+++++++||++|++.++.+++.|+. +++||||||....+..
T Consensus 307 ~~~~~~~~~r~~~~~---~~~~---~~~~p~~~nsW~~~~~~~~e~~i~~~ad~~~~~G~~--~~viDDgW~~~r~~~~- 377 (720)
T 2yfo_A 307 LSQQYHNCIRNHVCR---SKYV---HMQRPVLINSWEAAYFDFTGDTIVDLAKEAASLGID--MVVMDDGWFGKRNDDN- 377 (720)
T ss_dssp HHHHHHHHHHHHTCC---CGGG---GSCCCCEEEHHHHHTTCCCHHHHHHHHHHHHHHTCC--EEEECSSSBTTCSSTT-
T ss_pred HHHHHHHHHHhhccc---cccc---CCCCCeEEEchHHhCcCCCHHHHHHHHHHHHHcCCc--EEEECcccccCCCccc-
Confidence 6666554 5554321 1000 112347999999999999999999999999999985 9999999997543211
Q ss_pred CCccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCC
Q 003897 270 IDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNI 348 (788)
Q Consensus 270 ~~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~ 348 (788)
..+.+|..+ .||| +||+.++++||++ | +| +++|..+. .|.|++
T Consensus 378 ----------------~~~Gdw~~d~~kFP-------------~Glk~lvd~ih~~-G-lk-~GlW~~P~----~v~~~S 421 (720)
T 2yfo_A 378 ----------------SSLGDWQVNETKLG-------------GSLAELITRVHEQ-G-MK-FGIWIEPE----MINEDS 421 (720)
T ss_dssp ----------------SCTTCCSBCHHHHT-------------SCHHHHHHHHHHT-T-CE-EEEEECTT----EECSSS
T ss_pred ----------------ccCCCCeeChhhcC-------------ccHHHHHHHHHHC-C-CE-EEEEeccc----ccCCCC
Confidence 134567766 6899 6999999999998 8 99 89998764 255555
Q ss_pred CCCCCcceeeccCCCCCcccccccccccceeccCcCCCCHHHHHHHH-HHHHHHHHHcCCCEEEEcccchhhhhhcccCC
Q 003897 349 PGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMY-EGLHSHLEKVGIDGVKVDVIHLLEILCENYGG 427 (788)
Q Consensus 349 ~~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~~~~~FY-d~l~~~Las~GVDgVKvD~q~~l~~l~~~~gg 427 (788)
+.+++....+ ...++- .+....+.. -+.+.+|+ |++|+ +.+.+.+++|||||||+|++..+... +..+
T Consensus 422 ~l~~~hpdw~--~~~~~~---~~~~~~~~~---~LD~t~Pe-a~~~~~~~l~~l~~~~GIDy~K~D~n~~~~~~--~~~~ 490 (720)
T 2yfo_A 422 DLYRAHPDWA--IRIQGK---KPVRSRNQL---LLDFSRKE-VRDCVFDQICVVLDQGKIDYVKWDMNRSMADV--YAGN 490 (720)
T ss_dssp HHHHHCGGGB--CCCTTS---CCCCBTTBE---EBCTTSHH-HHHHHHHHHHHHHTTSCCCEEEECCCSCCCSC--CSTT
T ss_pred HHHHhCcceE--EECCCc---CcccCCceE---EECCCCHH-HHHHHHHHHHHHHHHcCCCEEEECCCCCcccc--CCcc
Confidence 3221100000 011110 000000011 03455555 55555 55557889999999999986543211 1111
Q ss_pred cchhHHHHHHHH---HHHHHhccCCCceeeecCCC
Q 003897 428 RVDLAKAYYKAL---TASVRKHFKGNGVIASMEHC 459 (788)
Q Consensus 428 r~~l~~ay~~AL---~~S~~~~F~g~~iI~CMs~~ 459 (788)
. .++|..++ -+.+.+.+++.-+..|.+..
T Consensus 491 ~---~~~y~~~~y~l~~~l~~~~p~v~~e~C~~GG 522 (720)
T 2yfo_A 491 L---SYDYVLGVYDFMERLCSRYPDLLLEGCSGGG 522 (720)
T ss_dssp H---HHHHHHHHHHHHHHHHHHSTTCEEEECBTBB
T ss_pred H---HHHHHHHHHHHHHHHHHhCCCcEEEeccCCC
Confidence 1 34444332 33456667776667888754
No 13
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=99.80 E-value=8.2e-18 Score=198.49 Aligned_cols=376 Identities=14% Similarity=0.188 Sum_probs=207.2
Q ss_pred ceEEEEEcCCC--CCcc-EEEEEEeeeCCeEEEecCCCCCcEEEEEEcCCc----ccccc-ccce-EEEEEecCChHHHH
Q 003897 121 TQLVILDNSTD--TGRP-YVLLLPIVEGPFRASLQPGADDYVDVCVESGST----KVTGD-SFRS-VVYVHLGDDPFKLV 191 (788)
Q Consensus 121 tq~ll~~~~~~--~~~~-y~vlLp~~~~~~~~~L~~~~~~~~~i~~~sg~~----~v~~~-~~~~-~~~v~~g~dp~~~i 191 (788)
..|+.+..++. +.|. |.+-|. -.|+|+..+..+..+.+.|..--... ..++. ++.+ .+++..+++-+.-|
T Consensus 230 ~P~~~l~~~~~~e~~G~v~g~~l~-~SGn~~~~~e~~~~~~~~~~~Gi~~~~~~~~L~pGesf~tP~~~~~~s~~Gl~~~ 308 (745)
T 3mi6_A 230 NPFMMLARPQTTDEQGAVFGFNLV-YSGNFLDAIEVDQYSTSRILTGINPDEFGWNLAPQATFQTPEAILSYTSAGMNQL 308 (745)
T ss_dssp CSCEEEECTTCCSSSBCEEEEEES-CCSSEEEEEEECTTSCEEEEEEECSTTCCEEECTTCEEECCCEEEEEESBCHHHH
T ss_pred CcEEEEecCCCCcccceEEEEEEE-eccceEEEEEECCCCcEEEEEecCCCCCceEeCCCCEEEccEEEEEEecCCHHHH
Confidence 45666665541 1223 222222 27888888877666654444322110 11111 1111 22333333335656
Q ss_pred HHHHHH-HHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCCC
Q 003897 192 KDAMRV-VRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPI 270 (788)
Q Consensus 192 ~~A~~~-~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~ 270 (788)
.+++.. ++.++..-+. ..+.+ .+|||||+++|+++||++|++.++.+++.|++ +++||||||...++..
T Consensus 309 s~~~h~~~r~~~~~~~~-~~~~~-----P~~wNsW~~~~~d~tee~il~~ad~~~~~G~e--~fviDDGW~~~r~~d~-- 378 (745)
T 3mi6_A 309 SQQMASFYQQHLVNPRF-AHEER-----PVLINNWEATYFDFNEAKLMTIVNQAKRLGIE--MFVLDDGWFGHRDDDT-- 378 (745)
T ss_dssp HHHHHHHHHHHTSCTTT-TTSCC-----CCEEECHHHHTTCCCHHHHHHHHHHHHHHTCC--EEEECTTCBTTCSSTT--
T ss_pred HHHHHHHHHHhccCccc-cCCCC-----ceEEEchHhhCcCCCHHHHHHHHHHHHHcCCc--EEEECcccccCCCCCc--
Confidence 666554 5665422111 12223 37999999999999999999999999999997 9999999997644211
Q ss_pred CccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCC
Q 003897 271 DSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIP 349 (788)
Q Consensus 271 ~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~ 349 (788)
..+.+|..| +||| +||+.++++||++ | +| +++|..+. .|.|+++
T Consensus 379 ---------------~~~Gdw~~d~~kFP-------------~Gl~~lv~~ih~~-G-lk-~glW~~Pe----~v~~dS~ 423 (745)
T 3mi6_A 379 ---------------TSLGDWFVDQRKFP-------------DGIEHFSQAVHQQ-G-MK-FGLWFEPE----MVSVDSD 423 (745)
T ss_dssp ---------------SCTTCCSBCTTTCT-------------THHHHHHHHHHHT-T-CE-EEEEECTT----EECSSSS
T ss_pred ---------------ccCCCceeChhhcC-------------ccHHHHHHHHHHC-C-CE-EEEEEccc----ccCCCCH
Confidence 135567766 7899 7999999999998 8 98 89998874 2667664
Q ss_pred CCCCcceeeccCCCCCcccccccccccceeccCcCCCCHHHHHHHHHHHH-HHHHHcCCCEEEEcccchhhhhhcc-cCC
Q 003897 350 GLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLH-SHLEKVGIDGVKVDVIHLLEILCEN-YGG 427 (788)
Q Consensus 350 ~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~~~~~FYd~l~-~~Las~GVDgVKvD~q~~l~~l~~~-~gg 427 (788)
.+++....+ ...++- .+....+.. -+++.+| +|++|+.+.. +.++++||||+|+|+.-.+...+.. ...
T Consensus 424 l~~~hPdw~--l~~~~g---~~~~~r~~~---vLD~tnP-evr~~i~~~l~~ll~~~GIDy~K~D~nr~i~~~~~~~~~~ 494 (745)
T 3mi6_A 424 LYQQHPDWL--IHAPKS---TPTPGRHQF---VLDMARP-EVVDYLFKLMSQMIESANLDYIKWDMNRYATEMFSSRLTS 494 (745)
T ss_dssp HHHHCGGGB--CCCTTC---CCCCSSSCE---EBCTTCH-HHHHHHHHHHHHHHHHHTCSEEEECCCSCCCSCCCSSSCG
T ss_pred HHHhCcceE--EEcCCC---ceeecCCeE---EECCCCH-HHHHHHHHHHHHHHHHCCCCEEEECCCCCCcccCCCcCcc
Confidence 322211100 011110 000000000 1344554 6677766665 6789999999999987544322211 111
Q ss_pred --cchh----HHHHHHHHHHHHHhccCCCceeeecCCCccccccccccccccccccccccCCCCCCCCCCccccchhHH-
Q 003897 428 --RVDL----AKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGDDFWCTDPSGDPNGTFWLQGCHMV- 500 (788)
Q Consensus 428 --r~~l----~~ay~~AL~~S~~~~F~g~~iI~CMs~~~~~~~~~~~~~~~~R~SDDf~p~dp~~~p~w~~~sh~~Hi~- 500 (788)
..+. .+++++.|+. +.+.||+.-|-+|-|....+-+ .++ +-++=+|..|. -| +-.+..|-
T Consensus 495 ~~q~~~~~~y~~g~y~ll~~-l~~~~P~v~ie~CssGGgR~D~-----g~L-~~~~~~W~SD~-tD-----a~eRl~IQ~ 561 (745)
T 3mi6_A 495 DQQLELPHRYILGVYQLYAR-LTQAYPNVLFESCASGGGRFDL-----GMM-YYAPQAWTSDD-TD-----AAERLLIQF 561 (745)
T ss_dssp GGGGGHHHHHHHHHHHHHHH-HHHHCTTCEEEECSTTTSSCSH-----HHH-HHSSEEECCSC-CC-----HHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHH-HHhhCCCeEEEecCCCCCccCh-----hHH-hcCCccccCCC-CC-----HHHHHHHHc
Confidence 1122 3445555555 5667898878899998764332 234 55555666554 11 22233331
Q ss_pred --HhhhhhhcccCC--ccCCcccccccCc-chHHHHHHHHHcCCCeEEe-eC--CCCCChhhhhhhhC---------CCC
Q 003897 501 --HCAYNSLWMGNF--IHPDWDMFQSTHP-CAEFHAASRAISGGPIYVS-DC--VGKHNFPLLKRLSM---------PDG 563 (788)
Q Consensus 501 --~~a~Nsl~~g~~--~~PDwDMF~S~h~-~a~~HAaaRaisGgPVyvS-D~--pg~hd~~lL~~lv~---------pdG 563 (788)
+..|=.--||.. ..|..-+-.+ +| .-+++. |++ |-+.+. |. -...+.+.+++.+. ..|
T Consensus 562 GtS~~yP~~~mgaHvs~~Pnh~t~R~-~~l~~R~~v---Am~-G~~G~eldl~~ls~~e~~~~~~~i~~YK~~R~~i~~G 636 (745)
T 3mi6_A 562 GTSYGYPQAMMGAHVSAVPNDQMGRI-TSLKTRGAV---AFF-GDLGYELDITKMAPTELDQVKKQVAFYKCYRQLFQFG 636 (745)
T ss_dssp HHTTTSCGGGEEEEEECSSCTTTCCC-CCHHHHHHH---HTS-SEEEEESCSTTCCHHHHHHHHHHHHHHHHTHHHHHHS
T ss_pred ccchhhCHHHHhccccCCccccCCCc-CCHHHHHHH---Hhc-cCceeeeChhhCCHHHHHHHHHHHHHHHHHhHHhccc
Confidence 112222224432 3444322211 23 123322 445 556666 54 34566778886663 357
Q ss_pred ceeccc
Q 003897 564 SILRCE 569 (788)
Q Consensus 564 ~ilR~~ 569 (788)
...|-.
T Consensus 637 ~~yrL~ 642 (745)
T 3mi6_A 637 KFYRID 642 (745)
T ss_dssp EEEECS
T ss_pred cEEeeC
Confidence 766665
No 14
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=99.14 E-value=7.9e-09 Score=123.64 Aligned_cols=176 Identities=22% Similarity=0.303 Sum_probs=115.6
Q ss_pred EEEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcc-cccccccccccCHHHHHHHHHHhHhCCCCCcEEEE
Q 003897 178 VVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFG-WCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLI 256 (788)
Q Consensus 178 ~~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~G-WCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vII 256 (788)
-.++-.|.+|-+++++-.++..+ ..-+|.|. || |++| .|+++.+++.|++.++.+++.|||...+.|
T Consensus 238 dyy~~~G~~p~~v~~~Y~~LtG~---------p~lpP~wa--lG~w~s~-~y~~~y~e~~v~~v~~~~r~~~IP~dvi~l 305 (773)
T 2f2h_A 238 EYFVIDGPTPKAVLDRYTRFTGR---------PALPPAWS--FGLWLTT-SFTTNYDEATVNSFIDGMAERNLPLHVFHF 305 (773)
T ss_dssp EEEEEECSSHHHHHHHHHHHHCC---------CCCCCGGG--GSEEEEC-CSSSCCCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHhcc---------cccCCccc--cCcEEec-cccCCCCHHHHHHHHHHHHHcCCCeeEEEE
Confidence 36677899998888875444321 12245553 45 6676 466778999999999999999999999999
Q ss_pred ecCCCCcCCCCCCCCccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEe
Q 003897 257 DDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWH 335 (788)
Q Consensus 257 DDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWH 335 (788)
|++|+... +|.+|.-| +||| +.++++++||++ | +| +.+|.
T Consensus 306 D~~w~~~~----------------------~w~dft~d~~~FP--------------dp~~mv~~Lh~~-G-~k-~~l~i 346 (773)
T 2f2h_A 306 DCFWMKAF----------------------QWCDFEWDPLTFP--------------DPEGMIRRLKAK-G-LK-ICVWI 346 (773)
T ss_dssp CGGGBCTT----------------------CCSSCCBCTTTCS--------------CHHHHHHHHHHT-T-CE-EEEEE
T ss_pred Cccccccc----------------------ccccceEChhhCC--------------CHHHHHHHHHHC-C-CE-EEEEe
Confidence 99999632 24456544 7899 358999999998 8 98 78996
Q ss_pred eeccccCccCCCCCCCCC-cceeeccCCCCCcccccccccccceeccC---cCCCCHHHHHHHHHHHHHHHHHcCCCEEE
Q 003897 336 ALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNG---VGFVPPELVDQMYEGLHSHLEKVGIDGVK 411 (788)
Q Consensus 336 Al~GYWgGI~P~~~~~~~-~s~l~~~~~spG~~~~~~d~a~~~i~~~G---lglv~P~~~~~FYd~l~~~Las~GVDgVK 411 (788)
-+. |.++++..++ ..+=...+...|... ....+ ..+ +++.+| +++++|.+.++.|.+.|||++|
T Consensus 347 ~P~-----I~~~s~~y~e~~~~g~~vk~~~G~~~-----~~~~w-~g~~~~~DftnP-~a~~ww~~~~~~l~d~Gvd~~w 414 (773)
T 2f2h_A 347 NPY-----IGQKSPVFKELQEKGYLLKRPDGSLW-----QWDKW-QPGLAIYDFTNP-DACKWYADKLKGLVAMGVDCFK 414 (773)
T ss_dssp CSE-----ECTTSTTHHHHHHHTCBCBCTTSSBC-----CBSSS-STTBEEBCTTSH-HHHHHHHHHHHHHHHTTCCEEE
T ss_pred cCC-----cCCCCHHHHHHHHCCceeECCCCCee-----eeeec-CCCceeeCCCCH-HHHHHHHHHHHHHHhcCCCEEE
Confidence 553 5555432222 111011111112110 00000 011 355665 5788888888888899999999
Q ss_pred Ecccc
Q 003897 412 VDVIH 416 (788)
Q Consensus 412 vD~q~ 416 (788)
.|.+-
T Consensus 415 ~D~~e 419 (773)
T 2f2h_A 415 TDFGE 419 (773)
T ss_dssp ECCCC
T ss_pred ccCCC
Confidence 99864
No 15
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=98.99 E-value=7.2e-09 Score=122.63 Aligned_cols=169 Identities=15% Similarity=0.169 Sum_probs=110.4
Q ss_pred EEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEec
Q 003897 179 VYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDD 258 (788)
Q Consensus 179 ~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDD 258 (788)
+++-.|.+|-+++++-.+...+ ..-+|.|.-++-+|+|..+ |++.|++.++.+++.|||...+.||+
T Consensus 147 ~y~~~G~~~~~v~~~Y~~ltG~---------p~~pP~WalG~~qsr~~y~----~~~ev~~v~~~~~~~~IP~dvi~lD~ 213 (693)
T 2g3m_A 147 FYVIEGPRIEDVLEKYTELTGK---------PFLPPMWAFGYMISRYSYY----PQDKVVELVDIMQKEGFRVAGVFLDI 213 (693)
T ss_dssp EEEEECSSHHHHHHHHHHHHCC---------CCCCCGGGGSEEEEETTCC----SHHHHHHHHHHHHHTTCCEEEEEECG
T ss_pred EEEEeCCCHHHHHHHHHHHhCC---------CCCCcccccCccccCCcCC----CHHHHHHHHHHHHHcCCCcceEEEec
Confidence 5666899998888775444322 2235666666667999322 89999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeee
Q 003897 259 GWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHAL 337 (788)
Q Consensus 259 GWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl 337 (788)
+|+...+ +|.-| +||| ++++++++||++ | +| +.+|.-+
T Consensus 214 ~y~~~~~------------------------dft~d~~~FP--------------dp~~mv~~Lh~~-G-~k-~~l~i~P 252 (693)
T 2g3m_A 214 HYMDSYK------------------------LFTWHPYRFP--------------EPKKLIDELHKR-N-VK-LITIVDH 252 (693)
T ss_dssp GGSBTTB------------------------TTCCCTTTCS--------------CHHHHHHHHHHT-T-CE-EEEEECS
T ss_pred ceecCCc------------------------cceEChhhCC--------------CHHHHHHHHHHC-C-CE-EEEEecC
Confidence 9985322 24433 7899 469999999998 8 88 6788543
Q ss_pred ccccCccCCCC--CCCCCcceeeccCCCCCcccccccccccceeccC----cCCCCHHHHHHHHHHHHHHHHHcCCCEEE
Q 003897 338 CGYWGGLRPNI--PGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNG----VGFVPPELVDQMYEGLHSHLEKVGIDGVK 411 (788)
Q Consensus 338 ~GYWgGI~P~~--~~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~G----lglv~P~~~~~FYd~l~~~Las~GVDgVK 411 (788)
. |.++. +.+++..+ ...+...|..... ....| +++.+| ++++||.+.++.|.+.||||+|
T Consensus 253 ~-----I~~~~~y~~y~e~~~-~fvk~~~G~~~~g-------~~W~g~~~~~Dftnp-~a~~ww~~~~~~l~~~GiDg~w 318 (693)
T 2g3m_A 253 G-----IRVDQNYSPFLSGMG-KFCEIESGELFVG-------KMWPGTTVYPDFFRE-DTREWWAGLISEWLSQGVDGIW 318 (693)
T ss_dssp C-----EECCTTCHHHHHHTT-SBCEETTSSBCEE-------EETTEEEECBCTTSH-HHHHHHHHHHHHHHTTTCCEEE
T ss_pred c-----ccCCCCcHHHHHHHh-heEECCCCCEEEE-------EeCCCCeeeeCCCCH-HHHHHHHHHHHHHHhcCCcEEE
Confidence 2 44432 00001000 1111111211000 01112 355665 6778898888888899999999
Q ss_pred Eccc
Q 003897 412 VDVI 415 (788)
Q Consensus 412 vD~q 415 (788)
.|.+
T Consensus 319 ~Dmn 322 (693)
T 2g3m_A 319 LDMN 322 (693)
T ss_dssp ECST
T ss_pred EecC
Confidence 9986
No 16
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=98.93 E-value=1.4e-08 Score=121.95 Aligned_cols=175 Identities=11% Similarity=0.071 Sum_probs=115.0
Q ss_pred EEEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEe
Q 003897 178 VVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLID 257 (788)
Q Consensus 178 ~~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIID 257 (788)
-.++-.|++|-+++++-.++..+ ..-+|.|.-++-+|.|.. -+++.|++.++.+++.|||...+.||
T Consensus 233 d~y~~~G~~p~~v~~~Y~~ltG~---------~~lpP~WalG~~~sr~~Y----~s~~ev~~vv~~~r~~~IP~Dvi~lD 299 (817)
T 4ba0_A 233 AYILVAGNSYPSLIENFTQVTGR---------QPLPPRWALGSFASRFGY----RSEAETRATVQKYKTEDFPLDTIVLD 299 (817)
T ss_dssp EEEEEECSSHHHHHHHHHHHHCC---------CCCCCGGGGSBEECCBCC----CSHHHHHHHHHHHHHHTCCCCEEEEC
T ss_pred EEEEecCCCHHHHHHHHHHhcCC---------CCCCCccccCcceecccC----CCHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 46677899998888876555432 223577777777888842 27999999999999999999999999
Q ss_pred cCCCCcCCCCCCCCccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEee
Q 003897 258 DGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 258 DGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
++|+..+... .+.+|.-| +||| +.++++++||++ | +| +.+|.-
T Consensus 300 ~dw~g~d~~~-------------------~~gdftwd~~~FP--------------dp~~mv~~Lh~~-G-~k-~vl~i~ 343 (817)
T 4ba0_A 300 LYWFGKDIKG-------------------HMGNLDWDKENFP--------------TPLDMMADFKQQ-G-VK-TVLITE 343 (817)
T ss_dssp GGGSCSSSSS-------------------CTTCCSCCTTTCS--------------CHHHHHHHHHHT-T-CE-EEEEEC
T ss_pred ccccCCcccc-------------------ccCccccccccCC--------------CHHHHHHHHHHC-C-CE-EEEEeC
Confidence 9998543211 13345544 7899 358999999998 8 88 678854
Q ss_pred eccccCccCCCCCCCCCcceeeccCCCCCccccccccc--ccceeccC----cCCCCHHHHHHHHHHHHHHHHHcCCCEE
Q 003897 337 LCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA--VDKIVNNG----VGFVPPELVDQMYEGLHSHLEKVGIDGV 410 (788)
Q Consensus 337 l~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a--~~~i~~~G----lglv~P~~~~~FYd~l~~~Las~GVDgV 410 (788)
+. |.++.+..++ . . .+|.....++-. .... ..| ++..+| ++++||.+.++.|.+.||||+
T Consensus 344 P~-----I~~~s~~y~e-~--~----~~g~~vk~~~G~~~~~~~-w~G~~~~~DftnP-~ar~ww~~~~~~l~~~GvDg~ 409 (817)
T 4ba0_A 344 PF-----VLTSSKRWDD-A--V----KAKALAKDPQGQPKAFEL-YFGNGGIIDVFSK-EGSRWFSSIYKDLSKQGVAGW 409 (817)
T ss_dssp SE-----EETTSTTHHH-H--H----HTTCBCBCTTSSBCCEEE-TTEEEEEBCTTSH-HHHHHHHHHHHHHHHHTCCEE
T ss_pred CC-----ccCCcHHHHH-H--H----hCCEEEECCCCCeEEEEe-cCCCceeecCCCH-HHHHHHHHHHHHHHhCCCcEE
Confidence 43 5444422111 0 0 011111111100 0000 111 345565 578888888888889999999
Q ss_pred EEccc
Q 003897 411 KVDVI 415 (788)
Q Consensus 411 KvD~q 415 (788)
|.|.+
T Consensus 410 W~Dmn 414 (817)
T 4ba0_A 410 WGDLG 414 (817)
T ss_dssp EECCT
T ss_pred EecCC
Confidence 99976
No 17
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=98.74 E-value=2e-07 Score=112.83 Aligned_cols=176 Identities=18% Similarity=0.228 Sum_probs=110.6
Q ss_pred EEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEec
Q 003897 179 VYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDD 258 (788)
Q Consensus 179 ~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDD 258 (788)
+|+-.|.+|-+++++-.++..+ ..-+|.|.-++-+|+|.. -+++.|++-++.+++.|||...+.+|+
T Consensus 290 ~y~~~Gptp~~Vi~~Y~~LtG~---------p~lpP~WalG~~qsr~~Y----~s~~ev~~vv~~~r~~~IP~Dvi~lDi 356 (898)
T 3lpp_A 290 FYILLGDTPEQVVQQYQQLVGL---------PAMPAYWNLGFQLSRWNY----KSLDVVKEVVRRNREAGIPFDTQVTDI 356 (898)
T ss_dssp EEEEEESSHHHHHHHHHHHHCC---------CCCCCGGGGSCEECCSCC----CSHHHHHHHHHHHHHTTCCCCEEEECG
T ss_pred EEEEeCCCHHHHHHHHHHHhCC---------CCcCcchhcCcceecccC----CCHHHHHHHHHHHHHcCCCceeeEecc
Confidence 5556799999888886655432 223577887888899942 278999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeee
Q 003897 259 GWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHAL 337 (788)
Q Consensus 259 GWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl 337 (788)
+|+...++ |.-| +||| ++++++++||++ | +| +.+|.-+
T Consensus 357 dy~~~~~d------------------------Ft~D~~~FP--------------dp~~mv~~Lh~~-G-~k-~vl~idP 395 (898)
T 3lpp_A 357 DYMEDKKD------------------------FTYDQVAFN--------------GLPQFVQDLHDH-G-QK-YVIILDP 395 (898)
T ss_dssp GGSSTTCT------------------------TCCCTTTTT--------------THHHHHHHHHHT-T-CE-EEEEECS
T ss_pred ccccCCCc------------------------ceEChhhCC--------------CHHHHHHHHHHC-C-CE-EEEEeCC
Confidence 99975432 3333 7899 579999999998 8 88 6788443
Q ss_pred ccccCccCCCCCCCCCcceeeccCCCCCcccccccc---cccceeccC----cCCCCHHHHHHHHHHHH-HHHHHcCCCE
Q 003897 338 CGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL---AVDKIVNNG----VGFVPPELVDQMYEGLH-SHLEKVGIDG 409 (788)
Q Consensus 338 ~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~---a~~~i~~~G----lglv~P~~~~~FYd~l~-~~Las~GVDg 409 (788)
. |.++.+.-...+.+..-...+|.....++- .... ...| +++.+| ++++||.+.+ .++.+.||||
T Consensus 396 ~-----I~~~~~~~~~~Y~~y~eg~~~g~fvk~~~G~~~~~g~-~WpG~~~~~Dftnp-~a~~ww~~~~~~~~~~~giDg 468 (898)
T 3lpp_A 396 A-----ISIGRRANGTTYATYERGNTQHVWINESDGSTPIIGE-VWPGLTVYPDFTNP-NCIDWWANECSIFHQEVQYDG 468 (898)
T ss_dssp C-----EECSCCTTSCCCHHHHHHHHHTCBCBCTTSSSBCCEE-ETTEEEECBCTTSH-HHHHHHHHHHHHHHHHSCCSE
T ss_pred c-----cccCCcccccccHHHHHHHhCCcEEECCCCCceeEEE-ecCCCccccCCCCH-HHHHHHHHHHHHHHhcCCccE
Confidence 2 444432000011111000001111111110 0000 1122 355665 5566666665 4667899999
Q ss_pred EEEccc
Q 003897 410 VKVDVI 415 (788)
Q Consensus 410 VKvD~q 415 (788)
+|.|.+
T Consensus 469 ~W~Dmn 474 (898)
T 3lpp_A 469 LWIDMN 474 (898)
T ss_dssp EEECST
T ss_pred EEEeCC
Confidence 999975
No 18
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=98.73 E-value=2.6e-07 Score=108.93 Aligned_cols=203 Identities=19% Similarity=0.281 Sum_probs=125.2
Q ss_pred ccEEEEEEeeeCCeEEEec--CCCCCcEEEEEEcCCccccccccceEEEEEecCChHHHHHHHHHHHHHhhccCCCCCCC
Q 003897 134 RPYVLLLPIVEGPFRASLQ--PGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEK 211 (788)
Q Consensus 134 ~~y~vlLp~~~~~~~~~L~--~~~~~~~~i~~~sg~~~v~~~~~~~~~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k 211 (788)
..|-||+= +.-.+.+. ....+.+.+.++.|.- -+++-.|.+|-+++++-.++..+ ..
T Consensus 100 ~~~Gvf~~---n~~~~~~d~~~~~~~~~~~~~~~g~l---------D~y~~~G~~p~~v~~~Y~~ltG~---------~~ 158 (666)
T 3nsx_A 100 TTFGLFFD---YPSKLTFDIGYTRMDTLKVSCENADL---------DIYVIEGENAYDIVKQFRRVIGR---------SY 158 (666)
T ss_dssp SCEEEEEE---CCSCEEEEESSSSTTEEEEEESSCCE---------EEEEEECSSHHHHHHHHHHHHCC---------CC
T ss_pred cceeEEEe---cCCcEEEEecccccceEEEEEecCce---------EEEEEcCCCHHHHHHHHHHhhCc---------cc
Confidence 36777752 33233332 2334566666665432 25556699998998886554432 22
Q ss_pred CCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCc
Q 003897 212 TPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRY 291 (788)
Q Consensus 212 ~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~ 291 (788)
-+|.|.-++-+|.|.- . +++.|++.++.+++.|||...+.||++|++..++ |
T Consensus 159 lpP~walG~~qsr~~Y-~---~~~~v~~v~~~~~~~~IP~dvi~lD~dy~~~~~~------------------------f 210 (666)
T 3nsx_A 159 IPPKFAFGFGQSRWGY-T---TKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKD------------------------F 210 (666)
T ss_dssp CCCGGGGSEEEEETTC-C---SHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCT------------------------T
T ss_pred CCcccccccccccccc-C---CHHHHHHHHHHHHhcCCCcceEEEecHHHHhhcc------------------------c
Confidence 3567777777799952 2 7999999999999999999999999999964332 3
Q ss_pred ccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCC--CCCCC-cceeeccCCCCCcc
Q 003897 292 QEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNI--PGLPE-KTTVVKPKLSPGLE 367 (788)
Q Consensus 292 ~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~--~~~~~-~s~l~~~~~spG~~ 367 (788)
.-| +||| ++++++++||++ | +|. .+|.-+. |..+. +..++ ..+=+..+...|..
T Consensus 211 t~d~~~FP--------------dp~~mv~~Lh~~-G-~k~-v~~idP~-----i~~~~~~~~y~e~~~~g~fvk~~~G~~ 268 (666)
T 3nsx_A 211 TVNEKNFP--------------DFPEFVKEMKDQ-E-LRL-IPIIDAG-----VKVEKGYEVYEEGVKNNYFCKREDGSD 268 (666)
T ss_dssp CCCTTTCT--------------THHHHHHHHHTT-T-CEE-EEEEESC-----EECCTTCHHHHHHHHTTCBCBCTTSCB
T ss_pred ccChhhCC--------------CHHHHHHHHHHc-C-ceE-Eeeeccc-----eeeecCchHHhhhcccCccccCCCCCc
Confidence 333 7899 479999999998 7 884 5763221 22211 00000 00001111111211
Q ss_pred cccccccccceeccC----cCCCCHHHHHHHHHHHHHHHHHcCCCEEEEccc
Q 003897 368 LTMEDLAVDKIVNNG----VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVI 415 (788)
Q Consensus 368 ~~~~d~a~~~i~~~G----lglv~P~~~~~FYd~l~~~Las~GVDgVKvD~q 415 (788)
. .. ....| .+..+| +++++|.+.++.|.+.|||++|.|..
T Consensus 269 ~------~g-~~WpG~~~~pDftnp-~a~~ww~~~~~~~~~~Gidg~W~Dmn 312 (666)
T 3nsx_A 269 F------VA-AVWPGDTHFPDMLNP-EARKWFGDKYRFLIDQGIEGFWNDMN 312 (666)
T ss_dssp C------CE-EETTEEEECBCTTSH-HHHHHHHHTTHHHHTTTCCEEEEEST
T ss_pred c------eE-EecCCccCCccccCH-HHHHHhhhhhhHHHhccchhhhhccC
Confidence 0 00 01122 355665 57788888888888999999999985
No 19
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=98.73 E-value=1.7e-07 Score=114.54 Aligned_cols=173 Identities=12% Similarity=0.113 Sum_probs=114.4
Q ss_pred EEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEec
Q 003897 179 VYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDD 258 (788)
Q Consensus 179 ~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDD 258 (788)
.|+-.|.+|-+++++-.+...+ ..-+|.|.-++-+|+|.. . |+++|++-++.+++.|||...++||+
T Consensus 405 yy~~~G~tp~~Vv~~Yt~LTGr---------p~mpP~WalG~wqsr~~Y--~--sq~ev~~va~~~re~gIPlDvi~lD~ 471 (1020)
T 2xvl_A 405 YYFVAGDTKDDIISGYRQLTGK---------SVMLPKWAYGFWQSRERY--K--SSDEIIQNLKEYRDRKIPIDNIVLDW 471 (1020)
T ss_dssp EEEEECSSHHHHHHHHHHHHCC---------CCCCCGGGGSEEECCTTC--C--SHHHHHHHHHHHHHTTCCCCEEEECS
T ss_pred EEEEeCCCHHHHHHHHHHHhCC---------CCCCCcceeceeeecCCC--C--CHHHHHHHHHHHHHcCCCcceEEEec
Confidence 5677899998888775444332 223577777777899963 2 79999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeee
Q 003897 259 GWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHAL 337 (788)
Q Consensus 259 GWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl 337 (788)
+|.... .|.+|.-| +||| ++++++++||++ | +| +.+|.-+
T Consensus 472 ~y~~~~----------------------~~~dFtwD~~rFP--------------dp~~mv~~Lh~~-G-~k-~vl~V~P 512 (1020)
T 2xvl_A 472 SYWPED----------------------AWGSHDFDKQFFP--------------DPKALVDKVHAM-N-AQ-IMISVWP 512 (1020)
T ss_dssp CCSCTT----------------------CTTSCCCCTTTCS--------------CHHHHHHHHHHT-T-CE-EEEEECS
T ss_pred cccccC----------------------cccceEEChhhCC--------------CHHHHHHHHHHC-C-CE-EEEEECC
Confidence 886431 13345544 7899 479999999998 8 88 5677433
Q ss_pred ccccCccCCCCCCCCCcceeeccCCCCCccccccccc-ccceeccC-----cCCCCHHHHHHHHHHHHHHHHHcCCCEEE
Q 003897 338 CGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA-VDKIVNNG-----VGFVPPELVDQMYEGLHSHLEKVGIDGVK 411 (788)
Q Consensus 338 ~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a-~~~i~~~G-----lglv~P~~~~~FYd~l~~~Las~GVDgVK 411 (788)
. |.++.+..++ . ...|.....+++. .......| ++..+|+....|++.+++.|.+.||||+|
T Consensus 513 ~-----I~~~s~~Y~e----~---~~~G~~v~~~~~~~~~~w~wpG~~~~v~DftNPear~~ww~~l~~~l~~~GiDg~W 580 (1020)
T 2xvl_A 513 K-----FYPTTDNYKE----L---NAKGFMFNRNLDEKNLDWIGKGYLNAFYDPFSPEATAIFWKQIRDKINVHGFDAWW 580 (1020)
T ss_dssp E-----ECTTSHHHHH----H---HHTTCEETHHHHTTCCCSSTTCCCCEEECTTSHHHHHHHHHHHHHHTGGGTCCEEE
T ss_pred c-----cCCCchhHHH----H---HhCCCEEEcCCCCccccccCCCCCceeeCCCChHHHHHHHHHHHHHhhhcCCcEEE
Confidence 2 4444321111 0 0112111111100 00001122 25677877777999999999999999999
Q ss_pred Eccc
Q 003897 412 VDVI 415 (788)
Q Consensus 412 vD~q 415 (788)
.|.+
T Consensus 581 ~Dmn 584 (1020)
T 2xvl_A 581 LDAV 584 (1020)
T ss_dssp ECCT
T ss_pred ecCC
Confidence 9986
No 20
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=98.67 E-value=3e-07 Score=111.08 Aligned_cols=175 Identities=15% Similarity=0.217 Sum_probs=109.7
Q ss_pred EEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEec
Q 003897 179 VYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDD 258 (788)
Q Consensus 179 ~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDD 258 (788)
+|+-.|.+|-+++++-.++..+ ..-+|.|.-++-+|+|.. -+++.|++.++.+++.|||...+.+|+
T Consensus 262 ~y~~~Gptp~~Vv~~Y~~ltG~---------p~lpP~WalG~~qsr~~Y----~s~~ev~~vv~~~r~~~IP~Dvi~lDi 328 (875)
T 3l4y_A 262 FYVFLGNTPEQVVQEYLELIGR---------PALPSYWALGFHLSRYEY----GTLDNMREVVERNRAAQLPYDVQHADI 328 (875)
T ss_dssp EEEEEESSHHHHHHHHHHHHCC---------CCCCCGGGGSEEECCSCC----CSHHHHHHHHHHHHHTTCCCCEEEECG
T ss_pred EEEEeCCCHHHHHHHHHHHhCC---------CCCCCccccccceeccCC----CCHHHHHHHHHHHHhcCCCCceEEEcc
Confidence 5556799999998886655532 223567777788999942 278999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccccccccccCcCcccccCcccC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeee
Q 003897 259 GWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHAL 337 (788)
Q Consensus 259 GWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an-~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl 337 (788)
+|+...++ |.-| +||| ++++++++||++ | +| +.+|.-+
T Consensus 329 dy~~~~~d------------------------Ft~D~~~FP--------------dp~~mv~~Lh~~-G-~k-~v~~idP 367 (875)
T 3l4y_A 329 DYMDERRD------------------------FTYDSVDFK--------------GFPEFVNELHNN-G-QK-LVIIVDP 367 (875)
T ss_dssp GGSBTTBT------------------------TCCCTTTTT--------------THHHHHHHHHHT-T-CE-EEEEECS
T ss_pred chhcCCCc------------------------eeeChhhCC--------------CHHHHHHHHHHC-C-CE-EEEEeCC
Confidence 99965432 4333 7899 479999999998 8 88 6688433
Q ss_pred ccccCccCCCCCCCCCcceeeccCCCCCcccccccc---cccceeccC----cCCCCHHHHHHHHHHHHH-HHHHcCCCE
Q 003897 338 CGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDL---AVDKIVNNG----VGFVPPELVDQMYEGLHS-HLEKVGIDG 409 (788)
Q Consensus 338 ~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~---a~~~i~~~G----lglv~P~~~~~FYd~l~~-~Las~GVDg 409 (788)
. |..++. ......+..-...+|.....+|- .... ...| .+..+| ++++||.+.++ ++.+.||||
T Consensus 368 ~-----I~~~s~-~~~~y~~y~eg~~~g~fvk~~dG~~~~~g~-~WpG~~~~pDFtnP-~a~~WW~~~~k~~~~~~gidg 439 (875)
T 3l4y_A 368 A-----ISNNSS-SSKPYGPYDRGSDMKIWVNSSDGVTPLIGE-VWPGQTVFPDYTNP-NCAVWWTKEFELFHNQVEFDG 439 (875)
T ss_dssp C-----EECCCC-SSSCCHHHHHHHHHTCBCBCTTSSSBCCEE-ETTEEEECBCTTSH-HHHHHHHHHHHHHHTTSCCSE
T ss_pred c-----cccCcc-cccccHHHHHHHHCCeEEECCCCCcceEEE-ecCCCccCcCCCCH-HHHHHHHHHHHHHHhhcCCcE
Confidence 3 333220 00011110000001111111110 0001 1122 345665 56677766665 557899999
Q ss_pred EEEccc
Q 003897 410 VKVDVI 415 (788)
Q Consensus 410 VKvD~q 415 (788)
+|.|..
T Consensus 440 ~W~Dmn 445 (875)
T 3l4y_A 440 IWIDMN 445 (875)
T ss_dssp EEECST
T ss_pred EEEcCC
Confidence 999975
No 21
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=3.9e-06 Score=97.87 Aligned_cols=213 Identities=15% Similarity=0.194 Sum_probs=125.9
Q ss_pred cccCHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccCCCCCCCCCCCCCCCC
Q 003897 230 LTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSS 309 (788)
Q Consensus 230 ~~Vte~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an~KFp~~~~~~~~~~~ 309 (788)
..+|.+..++.++-.++.|++ ||+||+||+...++ + + .++. |+
T Consensus 304 ~g~n~~~~k~yIDfAa~~G~~--yvlvD~gW~~~~~~-d-------------------~--~~~~---p~---------- 346 (641)
T 3a24_A 304 TGVNNPTYKAYIDFASANGIE--YVILDEGWAVNLQA-D-------------------L--MQVV---KE---------- 346 (641)
T ss_dssp CSSSHHHHHHHHHHHHHTTCC--EEEECTTSBCTTSC-C-------------------T--TCBC---TT----------
T ss_pred CCCCHHHHHHHHHHHHHcCCC--EEEEecccccCCCC-C-------------------c--cccC---Cc----------
Confidence 568999999999999999998 99999999952111 0 1 1222 21
Q ss_pred CCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccccccceeccCcCCCCHH
Q 003897 310 DNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPE 389 (788)
Q Consensus 310 ~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~ 389 (788)
.+|++++++.|+| | |+ +.+||.-.||+ . +
T Consensus 347 --~di~~l~~Ya~~k-g-V~-i~lw~~~~~~~------~--------------------------------------~-- 375 (641)
T 3a24_A 347 --IDLKELVDYAASK-N-VG-IILWAGYHAFE------R--------------------------------------D-- 375 (641)
T ss_dssp --CCHHHHHHHHHHT-T-CE-EEEEEEHHHHH------T--------------------------------------S--
T ss_pred --CCHHHHHHHHHhc-C-CE-EEEEeeCcchH------H--------------------------------------H--
Confidence 4899999999999 8 99 88998744321 0 0
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCCceeeecCCC--cccccccc
Q 003897 390 LVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHC--NDFMLLGT 467 (788)
Q Consensus 390 ~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~CMs~~--~~~~~~~~ 467 (788)
-++.++.+++|||+|||+|+.. ++.....+-|++.++++ ++| +|+-|.-.+ |.- +..+
T Consensus 376 -----~~~~~~~~~~~Gv~gvK~Df~~---------~~~Q~~v~~y~~i~~~a-A~~----~l~V~fHg~~~P~G-l~RT 435 (641)
T 3a24_A 376 -----MENVCRHYAEMGVKGFKVDFMD---------RDDQEMTAFNYRAAEMC-AKY----KLILDLHGTHKPAG-LNRT 435 (641)
T ss_dssp -----HHHHHHHHHHHTCCEEEEECCC---------CCSHHHHHHHHHHHHHH-HHT----TCEEEECSCCCCTT-HHHH
T ss_pred -----HHHHHHHHHHcCCCEEEECCCC---------CCcHHHHHHHHHHHHHH-HHc----CCEEEcCCCcCCCc-cccc
Confidence 1345566899999999999873 12345666777777766 454 344443333 221 2335
Q ss_pred ccccccc----ccc-ccccCCCCCCCCCCccccchhHHHhhhhhhcccCC-----ccCCc--ccccc--cCc---ch-HH
Q 003897 468 EAIALGR----VGD-DFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNF-----IHPDW--DMFQS--THP---CA-EF 529 (788)
Q Consensus 468 ~~~~~~R----~SD-Df~p~dp~~~p~w~~~sh~~Hi~~~a~Nsl~~g~~-----~~PDw--DMF~S--~h~---~a-~~ 529 (788)
+.|+|.| -.. ..|...| .....|....-|.++..|.. +..+. +=|.. .++ -. ..
T Consensus 436 yPN~~t~EgvrG~E~~~~~~~~--------~~~~~h~~~lPFtR~~~GpmDYTPg~f~~~~~~~~~~~~~~~~~~tT~a~ 507 (641)
T 3a24_A 436 YPNVLNFEGVNGLEQMKWSSPS--------VDQVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCR 507 (641)
T ss_dssp CTTEEEECCSCCGGGGGTCCTT--------SCHHHHHTTGGGTHHHHSCCCCCCCCSSEECTTCCCCCSSSCCEESCHHH
T ss_pred ccchhhhhhhceeeeccccccC--------CCCcceeEeeeehhcccCccccCChhhccccccccccccCCCcccccHHH
Confidence 5555533 333 2242222 22345666666888887752 22110 01111 111 12 23
Q ss_pred HHHHHHHcCCCe-EEeeCCCC----CC-hhhhhhh
Q 003897 530 HAASRAISGGPI-YVSDCVGK----HN-FPLLKRL 558 (788)
Q Consensus 530 HAaaRaisGgPV-yvSD~pg~----hd-~~lL~~l 558 (788)
..|+-.+.-.|| .+.|.|.+ ++ ++.|+++
T Consensus 508 QLAl~Vvf~SplQm~aD~P~~Y~~~p~~~~Fi~~v 542 (641)
T 3a24_A 508 QLALYVVFESPFNMLCDTPSNYMREPESTAFIAEI 542 (641)
T ss_dssp HHHHHHHSCCSEEEECSCHHHHHTCHHHHHHHHHS
T ss_pred HHHHHHHHHCHHHHhhcCHhHHhcCcHhHHHHHhC
Confidence 344445556666 45688863 33 5677744
No 22
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=97.91 E-value=0.0002 Score=86.68 Aligned_cols=102 Identities=19% Similarity=0.294 Sum_probs=78.8
Q ss_pred EEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEEec
Q 003897 179 VYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDD 258 (788)
Q Consensus 179 ~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vIIDD 258 (788)
+|+-.|.+|-+++++-.++..+ ..-+|.|.-++-.|.|. |. +++.|++-++.+++.+||...+.+|.
T Consensus 263 ~y~~~Gptp~~Vi~qYt~LtG~---------p~mpP~WalGy~qsR~~--Y~--~~~ev~~vv~~~r~~~IPlDvi~~Di 329 (908)
T 3top_A 263 FYVFLGPTPELVTQQYTELIGR---------PVMVPYWSLGFQLCRYG--YQ--NDSEIASLYDEMVAAQIPYDVQYSDI 329 (908)
T ss_dssp EEEECCSSHHHHHHHHHHHHCC---------CCCCCGGGGSCEECCTT--CC--SHHHHHHHHHHHHHHTCCCCEEEECG
T ss_pred EEEecCCCHHHHHHHHHHHhCC---------CCCCChhhhhccccccc--CC--CHHHHHHHHHHHHHcCCCeeeEEeec
Confidence 6666899999998886655432 22357788888899995 22 68999999999999999999999999
Q ss_pred CCCCcCCCCCCCCccccccccccCcCcccccCcccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEE
Q 003897 259 GWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVW 334 (788)
Q Consensus 259 GWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvW 334 (788)
.|.....+ |.-|.+|| ++++++++||++ | +|.| +|
T Consensus 330 dym~~~~~------------------------FT~d~~FP--------------dp~~mv~~Lh~~-G-~k~v-~i 364 (908)
T 3top_A 330 DYMERQLD------------------------FTLSPKFA--------------GFPALINRMKAD-G-MRVI-LI 364 (908)
T ss_dssp GGSSTTCT------------------------TCCCGGGT--------------THHHHHHHHHHH-T-CEEE-EE
T ss_pred cccccccc------------------------cccCCCCC--------------CHHHHHHHHHHC-C-CEEE-EE
Confidence 99865432 32233899 568999999998 8 8854 55
No 23
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=97.49 E-value=0.0019 Score=76.13 Aligned_cols=227 Identities=11% Similarity=0.117 Sum_probs=127.9
Q ss_pred cCHHHHHHHHHHhHhCCCCCcEEEE---ecCCCCcCCCCCCCCccccccccccCcCcccccCcccCCCCCCCCCCCCCCC
Q 003897 232 VQPHGVMEGVKGLVDGGCPPGLVLI---DDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDS 308 (788)
Q Consensus 232 Vte~~V~~~l~~L~~~Gip~~~vII---DDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an~KFp~~~~~~~~~~ 308 (788)
.|-+..++.++-.++.|++ +|+| |.||....+..+ +..| +|. .-.|+
T Consensus 368 ~nte~~K~YIDFAA~~G~e--yvLveGwD~GW~~~~~~~~------------~~~f-----d~~--~p~pd--------- 417 (738)
T 2d73_A 368 ANTANVKRYIDFAAAHGFD--AVLVEGWNEGWEDWFGNSK------------DYVF-----DFV--TPYPD--------- 417 (738)
T ss_dssp CCHHHHHHHHHHHHHTTCS--EEEECSCBTTGGGCSSSCC------------SSCC-----CSS--CBCTT---------
T ss_pred CCHHHHHHHHHHHHHcCCC--EEEEEeccCCcccccCccc------------cccc-----ccc--ccCCC---------
Confidence 6899999999999999998 9999 999975421111 0111 121 11232
Q ss_pred CCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccccccceeccCcCCCCH
Q 003897 309 SDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPP 388 (788)
Q Consensus 309 ~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P 388 (788)
-.|+.++++.|+| | |+ +.+||--.|-|
T Consensus 418 ---~Dl~eL~~YA~sK-G-V~-iilw~~t~~~~----------------------------------------------- 444 (738)
T 2d73_A 418 ---FDVKEIHRYAARK-G-IK-MMMHHETSASV----------------------------------------------- 444 (738)
T ss_dssp ---CCHHHHHHHHHHT-T-CE-EEEEEECTTBH-----------------------------------------------
T ss_pred ---CCHHHHHHHHHhC-C-CE-EEEEEcCCCch-----------------------------------------------
Confidence 3699999999999 8 98 88998733100
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCCceeeecCCC-cccccccc
Q 003897 389 ELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHC-NDFMLLGT 467 (788)
Q Consensus 389 ~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~CMs~~-~~~~~~~~ 467 (788)
....+--++.+++++++||.+||+|...-+-.- ..+.......+-|+++++++.. | . -+++--... |.- +..+
T Consensus 445 ~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r-~~~h~~Q~~v~~Y~~i~~~AA~-~--~-LmVnfHg~~kPtG-l~RT 518 (738)
T 2d73_A 445 RNYERHMDKAYQFMADNGYNSVKSGYVGNIIPR-GEHHYGQWMNNHYLYAVKKAAD-Y--K-IMVNAHEATRPTG-ICRT 518 (738)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCSSCBST-TCCTTSHHHHHHHHHHHHHHHH-T--T-CEEEETTSCCCCS-GGGT
T ss_pred hhHHHHHHHHHHHHHHcCCCEEEeCccccCcCC-cccccchHHHHHHHHHHHHHHH-c--C-cEEEccCCcCCCc-cccc
Confidence 000112346778899999999999986321000 1112235677889999988754 3 2 244433322 222 2334
Q ss_pred cccccc----ccccc-cccCCCCCCCCCCccccchhHHHhhhhhhcccCC-ccCC-cc---cccc--cC---cchHHHHH
Q 003897 468 EAIALG----RVGDD-FWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNF-IHPD-WD---MFQS--TH---PCAEFHAA 532 (788)
Q Consensus 468 ~~~~~~----R~SDD-f~p~dp~~~p~w~~~sh~~Hi~~~a~Nsl~~g~~-~~PD-wD---MF~S--~h---~~a~~HAa 532 (788)
+.|+|. |-..- .|-..+ ..|....-|.+++.|+. +-|= .+ -|.+ .+ .-..-|..
T Consensus 519 YPN~~t~EgvrG~E~~~~~~~~-----------p~H~~~LPFTR~~~GpMDYTPg~f~~~~~~~~~~~~~~~~tT~a~QL 587 (738)
T 2d73_A 519 YPNLIGNESARGTEYESFGGNK-----------VYHTTILPFTRLVGGPMDYTPGIFETHCNKMNPANNSQVRSTIARQL 587 (738)
T ss_dssp CTTEEEECCSCCGGGGGTTCCC-----------TTGGGTGGGTTTTTSCBCCCCCCSSCBGGGTCTTCCCBCSSCHHHHH
T ss_pred CcchHHHhhhcceeccccCCCC-----------CceeeECceeccCcCccccCCeeeccccccccccCCCcccccHHHHH
Confidence 455443 33332 232222 35656667888888863 2221 11 1211 11 12334444
Q ss_pred HHH-HcCCCe-EEeeCCCC----CC-hhhhhhh
Q 003897 533 SRA-ISGGPI-YVSDCVGK----HN-FPLLKRL 558 (788)
Q Consensus 533 aRa-isGgPV-yvSD~pg~----hd-~~lL~~l 558 (788)
|-. +.=.|| .+.|.|.+ .+ ++.|+.+
T Consensus 588 AlyVv~~SplQm~AD~Pe~Y~~~p~~~~Fik~V 620 (738)
T 2d73_A 588 ALYVTMYSPLQMAADIPENYERFMDAFQFIKDV 620 (738)
T ss_dssp HHHHHSCCSEEECCSCHHHHTTSHHHHHHHHHC
T ss_pred HHHHHHHhHHHHHhhCHHHHhhCcHHHHHHHhC
Confidence 444 334555 56688864 33 5666654
No 24
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*
Probab=96.77 E-value=0.0027 Score=78.18 Aligned_cols=86 Identities=17% Similarity=0.066 Sum_probs=55.8
Q ss_pred EEEEEecCChHHHHHHHHHHHHHhhccCC---CC-CCCCCCCcccCcccccccc--c----c-cccCHHHHHHHHHHhHh
Q 003897 178 VVYVHLGDDPFKLVKDAMRVVRSHLGTFK---LL-DEKTPPPIVDKFGWCTWDA--F----Y-LTVQPHGVMEGVKGLVD 246 (788)
Q Consensus 178 ~~~v~~g~dp~~~i~~A~~~~~~~~~tf~---~~-~~k~~P~~~d~~GWCTWda--f----y-~~Vte~~V~~~l~~L~~ 246 (788)
-+++..|++|-++|++-.++.-+ .|+ +. ...-+|.|.-++-.|-|.. + | ...+++.|++.++.+++
T Consensus 314 y~~~g~G~tp~~Vv~~Yt~LTGk---p~~~~~ltGrp~lpP~WalGy~qsR~gY~s~~~~~y~~~~~~~~v~~vv~~~r~ 390 (1027)
T 2x2h_A 314 HFVYGAGGGMECVVTAFSLLQGK---EFENQVLNKRSVMPPKYVFGFFQGVFGTSSLLRAHMPAGENNISVEEIVEGYQN 390 (1027)
T ss_dssp EEECCSSSSHHHHHHHHHHHTCC---GGGTCSSCSSSCCCCGGGGSCEEEEECCCBSSGGGCCCCTTCCBHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHhCC---cccccccccCCCCCCHHHhhcccccccccccccccccccccHHHHHHHHHHHHH
Confidence 34444588998888875554321 110 00 0222456666666687732 1 1 12356789999999999
Q ss_pred CCCCCcEEEEecCCCCcCCC
Q 003897 247 GGCPPGLVLIDDGWQSISHD 266 (788)
Q Consensus 247 ~Gip~~~vIIDDGWQ~~~~d 266 (788)
.+||...+.+|..|++..++
T Consensus 391 ~~IPlDvi~lDidymd~~r~ 410 (1027)
T 2x2h_A 391 NNFPFEGLAVDVDMQDNLRV 410 (1027)
T ss_dssp TTCCCCEEEECGGGSSTTCT
T ss_pred cCCCCcceEEecccccCCCc
Confidence 99999999999999876543
No 25
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=72.12 E-value=66 Score=36.75 Aligned_cols=29 Identities=24% Similarity=0.235 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHH-HcCCCEEEEcccch
Q 003897 389 ELVDQMYEGLHSHLE-KVGIDGVKVDVIHL 417 (788)
Q Consensus 389 ~~~~~FYd~l~~~La-s~GVDgVKvD~q~~ 417 (788)
+.+++|.-+...++. +.||||+-+|+...
T Consensus 300 p~Vr~~l~~~~~~W~~~~gvDGfR~D~~~~ 329 (583)
T 1ea9_C 300 PDVKEYLLKAAEYWIRETGIDGWRLDVANE 329 (583)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEETTCTT
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEeccccc
Confidence 467777766666665 89999999998543
No 26
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=71.90 E-value=38 Score=40.19 Aligned_cols=128 Identities=20% Similarity=0.170 Sum_probs=66.9
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCC-cceeeccCCCCCcccccccccccceeccCcCCCCHHH
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPEL 390 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~-~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~~ 390 (788)
..|+.+|+++|++ | |+ |.++-.+.- ..++...... +..-.|- ...+..+..++|.. .. +..-+ +.
T Consensus 313 ~dfk~lV~~~H~~-G-I~-VilD~V~NH----~~~~~~~~~~fdg~~~y~-~~d~~~~~~~~Wg~--~~---ln~~~-p~ 378 (722)
T 3k1d_A 313 DDFRALVDALHQA-G-IG-VIVDWVPAH----FPKDAWALGRFDGTPLYE-HSDPKRGEQLDWGT--YV---FDFGR-PE 378 (722)
T ss_dssp HHHHHHHHHHHHT-T-CE-EEEEECTTC----CCCCTTTTTTTTSSCCSB-CCCCCSSSTTCCCC--CC---BCTTS-HH
T ss_pred HHHHHHHHHHHHc-C-CE-EEEEEEeec----cCCccchhhcCCCCcccc-cCCcccCccCCCCC--ee---ecCCC-HH
Confidence 5899999999998 8 98 888866542 1111111111 1000110 00011112222211 00 12233 46
Q ss_pred HHHHHHHHHHHHHH-cCCCEEEEcccchhhhh----------hcccCCcchh-HHHHHHHHHHHHHhccCCCcee
Q 003897 391 VDQMYEGLHSHLEK-VGIDGVKVDVIHLLEIL----------CENYGGRVDL-AKAYYKALTASVRKHFKGNGVI 453 (788)
Q Consensus 391 ~~~FYd~l~~~Las-~GVDgVKvD~q~~l~~l----------~~~~ggr~~l-~~ay~~AL~~S~~~~F~g~~iI 453 (788)
+++|.-+...++.+ .||||+.+|+-..+-.+ ...++++..+ +..+.+.|.+.+.+.+|+.-+|
T Consensus 379 Vr~~l~~~~~~Wl~~~gvDGfR~Dav~~mly~d~~r~~g~w~~n~~gg~~n~~~~~fl~~l~~~v~~~~P~~~~i 453 (722)
T 3k1d_A 379 VRNFLVANALYWLQEFHIDGLRVDAVASMLYLDYSRPEGGWTPNVHGGRENLEAVQFLQEMNATAHKVAPGIVTI 453 (722)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCTHHHHBCCCCCCSSCCSCCCSSCSBCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEcchhhhhhccccccccccccccCCCccChHHHHHHHHHHHHHHHhCCCeEEE
Confidence 77777776666554 89999999985543211 1122333333 4467777777777777764333
No 27
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=70.38 E-value=77 Score=35.65 Aligned_cols=93 Identities=10% Similarity=0.076 Sum_probs=51.6
Q ss_pred CcccCcccccccccccccCH-HHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCC-CCccccccccccCcCcccccCcc
Q 003897 215 PIVDKFGWCTWDAFYLTVQP-HGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDP-IDSEGINRTAAGEQMPCRLLRYQ 292 (788)
Q Consensus 215 ~~~d~~GWCTWdafy~~Vte-~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~-~~~~~~~~~~~~~~~~~rL~~~~ 292 (788)
.++..|-|.+++..+ =+- ++|.+.|+.|++.|+. .|-| ..-.+... ...........|++ ..+++
T Consensus 18 vi~q~F~w~~~~~~g--Gd~~~gi~~~LdyLk~LGvt--~IwL-----~Pi~e~~~~~~~~~~~~~~~GY~----~~~id 84 (527)
T 1gcy_A 18 IILQGFHWNVVREAP--NDWYNILRQQAATIAADGFS--AIWM-----PVPWRDFSSWSDGSKSGGGEGYF----WHDFN 84 (527)
T ss_dssp CEEECCCTTHHHHST--TTHHHHHHHHHHHHHHTTCS--EEEE-----CCCSCCCCCBC---CCBCCSSTT----CSSSC
T ss_pred EEEEEEEcCCCcccC--CcHHHHHHHHHHHHHhcCCC--EEEe-----CCccccccccccCCCCCCCCCcc----cccCC
Confidence 467778787776543 234 7888899999999996 3322 21110000 00000001122343 22333
Q ss_pred cCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEE
Q 003897 293 ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVW 334 (788)
Q Consensus 293 an~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvW 334 (788)
.+.+|... ..|+++|+++|++ | || |.+=
T Consensus 85 ~~p~~Gt~-----------~dfk~Lv~~aH~~-G-I~-VilD 112 (527)
T 1gcy_A 85 KNGRYGSD-----------AQLRQAASALGGA-G-VK-VLYD 112 (527)
T ss_dssp SCSSSCCH-----------HHHHHHHHHHHHT-T-CE-EEEE
T ss_pred CCCCCCCH-----------HHHHHHHHHHHHC-C-CE-EEEE
Confidence 22566532 5899999999998 8 98 5443
No 28
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=69.09 E-value=74 Score=36.71 Aligned_cols=179 Identities=15% Similarity=0.102 Sum_probs=83.9
Q ss_pred CHHHHHHHH-HHhHhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCc-ccCCCCCCCCCCCCCCCCC
Q 003897 233 QPHGVMEGV-KGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRY-QENFKFRDYVSPNGGDSSD 310 (788)
Q Consensus 233 te~~V~~~l-~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~-~an~KFp~~~~~~~~~~~~ 310 (788)
|-++|.+.+ +.|++.|+. .|-|===++..... . -|++- .++ ..+.+|-..
T Consensus 153 ~~~~i~~~ll~yl~~lGv~--~i~l~Pi~~~~~~~-~-----------~GY~~----~~y~~~~~~~Gt~---------- 204 (617)
T 1m7x_A 153 SYRELADQLVPYAKWMGFT--HLELLPINEHPFDG-S-----------WGYQP----TGLYAPTRRFGTR---------- 204 (617)
T ss_dssp CHHHHHHHHHHHHHHTTCS--EEEESCCEECSCGG-G-----------TTSSC----SEEEEECGGGSCH----------
T ss_pred CHHHHHHHHHHHHHHcCCC--EEEecccccCCCCC-C-----------CCccc----ccCCccCccCCCH----------
Confidence 667787776 999999996 44442111111000 0 01111 112 234555422
Q ss_pred CCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCC-cceeeccCCCCCcccccccccccceeccCcCCCCHH
Q 003897 311 NKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPE 389 (788)
Q Consensus 311 ~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~-~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~ 389 (788)
..|+++|+++|++ | |+ |.++..+.- ..++.....+ +..-.|....| -.+..++| +... +..-+ +
T Consensus 205 -~~~~~lv~~~H~~-G-i~-VilD~V~NH----~~~~~~~~~~~d~~~~y~~~~~-~~g~~~~w--~~~~---ln~~~-p 269 (617)
T 1m7x_A 205 -DDFRYFIDAAHAA-G-LN-VILDWVPGH----FPTDDFALAEFDGTNLYEHSDP-REGYHQDW--NTLI---YNYGR-R 269 (617)
T ss_dssp -HHHHHHHHHHHHT-T-CE-EEEEECTTS----CCCSTTSSTTGGGSCSSBCC--------------CCC---BCTTS-H
T ss_pred -HHHHHHHHHHHHC-C-CE-EEEEEecCc----ccCccchhhhcCCCccccccCc-ccCCcCCC--CCce---ecCCC-H
Confidence 5899999999998 8 98 778855442 1111111111 10001100000 01112222 1110 22334 4
Q ss_pred HHHHHHHHHHHHHH-HcCCCEEEEcccchhhhhh----------cccCCcc-hhHHHHHHHHHHHHHhccCCCceee
Q 003897 390 LVDQMYEGLHSHLE-KVGIDGVKVDVIHLLEILC----------ENYGGRV-DLAKAYYKALTASVRKHFKGNGVIA 454 (788)
Q Consensus 390 ~~~~FYd~l~~~La-s~GVDgVKvD~q~~l~~l~----------~~~ggr~-~l~~ay~~AL~~S~~~~F~g~~iI~ 454 (788)
.+++|.-+..+++. +.||||+.+|+...+-... ..+++.. .-+..+.+.|.+.+.+..++.-+|.
T Consensus 270 ~v~~~i~~~~~~W~~~~gvDGfR~D~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~~ia 346 (617)
T 1m7x_A 270 EVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMA 346 (617)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCSHHHHCC--------------CTTCCHHHHHHHHHHHHHHHHSSTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCcCEEEEcchhhhhhccccccccccccccccccCCchHHHHHHHHHHHHHHHCCCeEEEE
Confidence 67777666666555 5799999999854421100 0011111 1234567777777766666543443
No 29
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=59.76 E-value=73 Score=37.60 Aligned_cols=169 Identities=12% Similarity=0.120 Sum_probs=82.8
Q ss_pred ccccccccccccc---------CHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCCCCcccc---ccccccCcCccc
Q 003897 220 FGWCTWDAFYLTV---------QPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGI---NRTAAGEQMPCR 287 (788)
Q Consensus 220 ~GWCTWdafy~~V---------te~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~---~~~~~~~~~~~r 287 (788)
..+++|+.++-.- |-++|.+.|+.|++.|+. .|-|===++.....+. +..++ .....|+.+.
T Consensus 229 ~~~~~iYEi~~rsf~~~~~~~Gd~~gi~~~LdyLk~LGvt--~I~L~Pi~~~~~~~~~--g~~n~~~~~~~d~GspY~-- 302 (695)
T 3zss_A 229 ALYGAWYEFFPRSEGTPHTPHGTFRTAARRLPAIAAMGFD--VVYLPPIHPIGTTHRK--GRNNTLSATGDDVGVPWA-- 302 (695)
T ss_dssp HHCEEEEECCGGGSCCSSCCSCCHHHHGGGHHHHHHTTCC--EEEECCCSCBCCTTCC--CGGGCSSCCTTCCCCTTS--
T ss_pred cccceEEEEehhHhcCCCCCCCCHHHHHHHHHHHHhCCCC--EEEECCcccCCccccc--cccccccccccCCCCccc--
Confidence 4677888776522 348999999999999997 4433212222111000 00000 0011111111
Q ss_pred ccC----c-ccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCC
Q 003897 288 LLR----Y-QENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKL 362 (788)
Q Consensus 288 L~~----~-~an~KFp~~~~~~~~~~~~~~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~ 362 (788)
..+ + .-+.+|.+. ..|+.+|+++|++ | || |.+-..+. -+++.+-+..... .+...
T Consensus 303 i~d~~~~y~~idp~~Gt~-----------edfk~LV~~aH~~-G-I~-VilD~V~N-----hs~~~~~~~~~~d-wf~~~ 362 (695)
T 3zss_A 303 IGSPEGGHDSIHPALGTL-----------DDFDHFVTEAGKL-G-LE-IALDFALQ-----CSPDHPWVHKHPE-WFHHR 362 (695)
T ss_dssp BCBTTBCTTSCCTTTCCH-----------HHHHHHHHHHHHT-T-CE-EEEEECCE-----ECTTSTHHHHCGG-GSCCC
T ss_pred ccCCCCCccccCcccCCH-----------HHHHHHHHHHHHC-C-CE-EEEEeecc-----CCccchhhhcccc-eeeec
Confidence 111 1 223455422 5899999999998 8 98 66665554 1232211100000 00001
Q ss_pred CCCccccccc--ccccceeccCcCCCC-HHHHHHHHHHHHHHHHHcCCCEEEEcccc
Q 003897 363 SPGLELTMED--LAVDKIVNNGVGFVP-PELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (788)
Q Consensus 363 spG~~~~~~d--~a~~~i~~~Glglv~-P~~~~~FYd~l~~~Las~GVDgVKvD~q~ 416 (788)
..|.....+. -.+..+. .+..-+ .+.++++..+...++.+.||||+-+|+-.
T Consensus 363 ~dg~~~~~~~~~~~~~~~~--dLn~~n~~p~V~~~l~~~l~~Wi~~GVDGfRlD~a~ 417 (695)
T 3zss_A 363 PDGTIAHAENPPKKYQDIY--PIAFDADPDGLATETVRILRHWMDHGVRIFRVDNPH 417 (695)
T ss_dssp TTSCCCCEEETTEEETTCE--ECCCSSCHHHHHHHHHHHHHHHHHTTCCEEEESSGG
T ss_pred CCCCcccCCCCCccccccc--cccccCCcHHHHHHHHHHHHHHHHhCCCEEEecCcc
Confidence 1121100000 0000000 022223 26788888888888878999999999843
No 30
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=53.61 E-value=62 Score=35.03 Aligned_cols=29 Identities=17% Similarity=0.246 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHH-cCCCEEEEcccch
Q 003897 389 ELVDQMYEGLHSHLEK-VGIDGVKVDVIHL 417 (788)
Q Consensus 389 ~~~~~FYd~l~~~Las-~GVDgVKvD~q~~ 417 (788)
+.++++..+..+++.+ .||||+-+|+-..
T Consensus 155 p~v~~~i~~~~~~w~~~~gvDGfR~D~~~~ 184 (405)
T 1ht6_A 155 DRVQRELKEWLLWLKSDLGFDAWRLDFARG 184 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEETTGGG
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEecccc
Confidence 4677777777778876 9999999998643
No 31
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=53.36 E-value=1.2e+02 Score=34.47 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHH-HcCCCEEEEcccc
Q 003897 389 ELVDQMYEGLHSHLE-KVGIDGVKVDVIH 416 (788)
Q Consensus 389 ~~~~~FYd~l~~~La-s~GVDgVKvD~q~ 416 (788)
+.+++|..+...++. +.||||+-+|+..
T Consensus 303 p~Vr~~l~~~~~~Wl~~~giDGfR~D~a~ 331 (588)
T 1j0h_A 303 PEVKRYLLDVATYWIREFDIDGWRLDVAN 331 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEETTGG
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEeccc
Confidence 467777767666665 7999999999754
No 32
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=53.13 E-value=1.2e+02 Score=34.61 Aligned_cols=29 Identities=17% Similarity=0.235 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHH-HcCCCEEEEcccch
Q 003897 389 ELVDQMYEGLHSHLE-KVGIDGVKVDVIHL 417 (788)
Q Consensus 389 ~~~~~FYd~l~~~La-s~GVDgVKvD~q~~ 417 (788)
+.++++..+..+++. +.||||+-+|+-..
T Consensus 286 p~V~~~l~~~~~~Wi~~~GVDGfRlD~~~~ 315 (601)
T 3edf_A 286 PLVANYLIQNNIWWIEYAGLSGLRIDTYGY 315 (601)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEESSGGG
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEeecccc
Confidence 466777666666666 89999999998643
No 33
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens}
Probab=52.78 E-value=36 Score=36.41 Aligned_cols=57 Identities=14% Similarity=0.064 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhc
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKH 446 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~ 446 (788)
+|+.-..|-+++.+++.+.|+|||-+|....-.. +..+-..+.+..++++.+...+.
T Consensus 92 ~~~~R~~Fi~siv~~~~~~~fDGiDiDWEyP~~~---d~~~~~~ll~elr~~~~~~~~~~ 148 (365)
T 4ay1_A 92 SSTSRLEFINSIILFLRNHNFDGLDVSWIYPDQK---ENTHFTVLIHELAEAFQKDFTKS 148 (365)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEEEESCCHHH---HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHhcCCceEEEeeecCCcc---cccccHHHHHHHHHHHHHHHhhh
Confidence 4566678999999999999999999998654221 11124556667777776655544
No 34
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=52.61 E-value=1.2e+02 Score=34.71 Aligned_cols=29 Identities=24% Similarity=0.295 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcccch
Q 003897 389 ELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (788)
Q Consensus 389 ~~~~~FYd~l~~~Las~GVDgVKvD~q~~ 417 (788)
+.+++|.-+..+++.+.||||+-+|+...
T Consensus 301 ~~vr~~l~~~~~~Wl~~gvDGfR~D~a~~ 329 (585)
T 1wzl_A 301 PEVKEYLFDVARFWMEQGIDGWRLDVANE 329 (585)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEETTGGG
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEecccc
Confidence 46778877777766699999999998543
No 35
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=52.35 E-value=39 Score=39.19 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccccccceeccCcCCCCHHHH
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELV 391 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~~~ 391 (788)
..|+.+|+++|++ | |+ |.+--.+.- +.|+...+.. . .|.-......-.+.. -+..-+ +.+
T Consensus 203 ~~~~~lv~~~H~~-G-i~-VilD~V~NH----~~~~~~~~~~----~----~~~~~~~~~~~~wg~----~ln~~~-p~V 262 (618)
T 3m07_A 203 DDFKAFIDAAHGY-G-LS-VVLDIVLNH----FGPEGNYLPL----L----APAFFHKERMTPWGN----GIAYDV-DAV 262 (618)
T ss_dssp HHHHHHHHHHHHT-T-CE-EEEEECCSC----CCSSSCCHHH----H----CGGGEEEEEEETTEE----EECTTS-HHH
T ss_pred HHHHHHHHHHHHC-C-CE-EEEeecCcc----CCCCcccccc----c----CchhhcCCCCCCCCC----CcCCCC-HHH
Confidence 5899999999998 8 98 767655442 2233211110 0 000000000000000 123334 467
Q ss_pred HHHHHHHHHHHH-HcCCCEEEEcccch
Q 003897 392 DQMYEGLHSHLE-KVGIDGVKVDVIHL 417 (788)
Q Consensus 392 ~~FYd~l~~~La-s~GVDgVKvD~q~~ 417 (788)
++|.-+...++. +.||||+-+|+-..
T Consensus 263 ~~~i~~~~~~w~~~~gvDGfR~D~~~~ 289 (618)
T 3m07_A 263 RRYIIEAPLYWLTEYHLDGLRFDAIDQ 289 (618)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEETTGGG
T ss_pred HHHHHHHHHHHHHHhCccEEEecchhh
Confidence 777766666665 89999999998654
No 36
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=51.61 E-value=40 Score=37.01 Aligned_cols=30 Identities=20% Similarity=0.233 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcccch
Q 003897 388 PELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (788)
Q Consensus 388 P~~~~~FYd~l~~~Las~GVDgVKvD~q~~ 417 (788)
|+.++++..+..+|..+.||||+-+|+...
T Consensus 117 ~~~Vr~~~~~~~~~Wl~~gvDGfRlD~v~~ 146 (424)
T 2dh2_A 117 VDTVATKVKDALEFWLQAGVDGFQVRDIEN 146 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCGGG
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEecccc
Confidence 567888888888887789999999998653
No 37
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=49.75 E-value=64 Score=35.37 Aligned_cols=28 Identities=25% Similarity=0.410 Sum_probs=21.8
Q ss_pred HHHHHHH----HHHHHHHHHcCCCEEEEcccc
Q 003897 389 ELVDQMY----EGLHSHLEKVGIDGVKVDVIH 416 (788)
Q Consensus 389 ~~~~~FY----d~l~~~Las~GVDgVKvD~q~ 416 (788)
+.+++|. .+...++.+.||||+-+|+-.
T Consensus 170 p~V~~~l~~~~~~~~~~w~~~gvDGfR~Da~~ 201 (435)
T 1mxg_A 170 EWDQYWLWKSNESYAAYLRSIGFDGWRFDYVK 201 (435)
T ss_dssp HHHHHHHTSSTTSHHHHHHHTTCCEEEETTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEhhhhh
Confidence 4677554 567788888999999999864
No 38
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=46.64 E-value=1.5e+02 Score=32.25 Aligned_cols=147 Identities=12% Similarity=0.058 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCc-ccCCCCCCCCCCCCCCCCCC
Q 003897 233 QPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRY-QENFKFRDYVSPNGGDSSDN 311 (788)
Q Consensus 233 te~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~-~an~KFp~~~~~~~~~~~~~ 311 (788)
+-++|.+.|+.|++.|+. .|.|===+.+...+.. .....|++- .++ .-+.+|-+.
T Consensus 28 ~~~~i~~~l~yl~~lG~~--~i~l~Pi~~~~~~~~~-------~~~~~gY~~----~dy~~i~~~~Gt~----------- 83 (449)
T 3dhu_A 28 NFAGVTADLQRIKDLGTD--ILWLLPINPIGEVNRK-------GTLGSPYAI----KDYRGINPEYGTL----------- 83 (449)
T ss_dssp SHHHHHTTHHHHHHHTCS--EEEECCCSCBCSTTCC-------TTTCCTTSB----SCTTSCCGGGCCH-----------
T ss_pred CHHHHHHhHHHHHHcCCC--EEEECCcccccccCCC-------CCCCCCcCc----ccccccCcccCCH-----------
Confidence 567889999999999997 5544222222111100 000011221 122 224555532
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccc-cccccccceeccCcCCCCHHH
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELT-MEDLAVDKIVNNGVGFVPPEL 390 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~-~~d~a~~~i~~~Glglv~P~~ 390 (788)
..|+.+|+++|++ | || |.+.-.+.- .++++..........+. ...|.... ..+| ..+. -+..-+ +.
T Consensus 84 ~~~~~lv~~~h~~-G-i~-vi~D~V~NH----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~w--~~~~--dLn~~n-p~ 150 (449)
T 3dhu_A 84 ADFKALTDRAHEL-G-MK-VMLDIVYNH----TSPDSVLATEHPEWFYH-DADGQLTNKVGDW--SDVK--DLDYGH-HE 150 (449)
T ss_dssp HHHHHHHHHHHHT-T-CE-EEEEECCSE----ECTTSHHHHHCGGGBCB-CTTSCBCCSSTTC--TTCE--EBCTTS-HH
T ss_pred HHHHHHHHHHHHC-C-CE-EEEEEccCc----CcCccchhhcCccceEE-CCCCCcCCCCCCC--CCCC--ccCCCC-HH
Confidence 5799999999998 8 98 778755431 11211000000000000 00010000 0000 0000 022234 46
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccch
Q 003897 391 VDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (788)
Q Consensus 391 ~~~FYd~l~~~Las~GVDgVKvD~q~~ 417 (788)
++++..+..+++.+. |||+-+|+-..
T Consensus 151 Vr~~l~~~l~~w~~~-vDGfRlDaa~~ 176 (449)
T 3dhu_A 151 LWQYQIDTLLYWSQF-VDGYRCDVAPL 176 (449)
T ss_dssp HHHHHHHHHHHHTTT-CSEEEETTGGG
T ss_pred HHHHHHHHHHHHHHh-CCEEEEEChhh
Confidence 788888888888888 99999997543
No 39
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens}
Probab=45.62 E-value=36 Score=35.93 Aligned_cols=26 Identities=23% Similarity=0.479 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccc
Q 003897 391 VDQMYEGLHSHLEKVGIDGVKVDVIH 416 (788)
Q Consensus 391 ~~~FYd~l~~~Las~GVDgVKvD~q~ 416 (788)
..+|.+.+.+++.++|+|||=+|...
T Consensus 117 r~~F~~s~~~~l~~ygfDGiDiDwE~ 142 (328)
T 4axn_A 117 EDKLKDEIIRLVEVYGFDGLDIDLEQ 142 (328)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECT
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeccc
Confidence 35899999999999999999999864
No 40
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=44.80 E-value=40 Score=38.93 Aligned_cols=138 Identities=12% Similarity=0.093 Sum_probs=68.8
Q ss_pred CHHHHHHHHHHhHhCCCCCcEEEEecCCCCcCCCCCCCCccccccccccCcCcccccCcccCCCCCCCCCCCCCCCCCCC
Q 003897 233 QPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNK 312 (788)
Q Consensus 233 te~~V~~~l~~L~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~~~~~rL~~~~an~KFp~~~~~~~~~~~~~~ 312 (788)
+-++|.+.|+.|++.|+. .|-|===++....+. -|++-. .. +..+.+|-.. .
T Consensus 142 ~~~gi~~~L~yl~~lGv~--~I~L~Pi~~~~~~~~------------wGY~~~-~y--~~~~~~~Gt~-----------~ 193 (602)
T 2bhu_A 142 TYRAAAEKLPYLKELGVT--AIQVMPLAAFDGQRG------------WGYDGA-AF--YAPYAPYGRP-----------E 193 (602)
T ss_dssp SHHHHHHTHHHHHHHTCC--EEEECCCEECSSSCC------------CSTTCC-EE--EEECGGGCCH-----------H
T ss_pred CHHHHHHHHHHHHHcCCC--EEEECChhhccCCCC------------CCcccc-cC--cccCcCCCCH-----------H
Confidence 668899999999999996 444421121111000 011110 01 2234555422 5
Q ss_pred CHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccccccceeccCcCCCCHHHHH
Q 003897 313 GMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVD 392 (788)
Q Consensus 313 GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~~~~ 392 (788)
.|+.+|+++|++ | || |.+...+.- ..|++.... + . .|........-.+.. -+..-+ +.++
T Consensus 194 d~~~lv~~~H~~-G-i~-VilD~V~NH----~~~~~~~~~---~-~----~~~~~~~~~~~~w~~----~ln~~~-~~v~ 253 (602)
T 2bhu_A 194 DLMALVDAAHRL-G-LG-VFLDVVYNH----FGPSGNYLS---S-Y----APSYFTDRFSSAWGM----GLDYAE-PHMR 253 (602)
T ss_dssp HHHHHHHHHHHT-T-CE-EEEEECCSC----CCSSSCCHH---H-H----CGGGEEEEEECSSSE----EECTTS-HHHH
T ss_pred HHHHHHHHHHHC-C-CE-EEEEecccc----cccCCcccc---c-c----CcccccCCCCCCCCC----CccCCC-HHHH
Confidence 899999999998 8 98 666644431 122221100 0 0 000000000000000 022334 4566
Q ss_pred HHHHHHHHH-HHHcCCCEEEEcccchh
Q 003897 393 QMYEGLHSH-LEKVGIDGVKVDVIHLL 418 (788)
Q Consensus 393 ~FYd~l~~~-Las~GVDgVKvD~q~~l 418 (788)
+|.-+...+ +.+.||||+.+|+...+
T Consensus 254 ~~i~~~~~~W~~~~gvDGfR~D~~~~i 280 (602)
T 2bhu_A 254 RYVTGNARMWLRDYHFDGLRLDATPYM 280 (602)
T ss_dssp HHHHHHHHHHHHHHCCSEEEETTGGGC
T ss_pred HHHHHHHHHHHHHhCCCEEEEechHhh
Confidence 665555554 55799999999986543
No 41
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A*
Probab=44.66 E-value=40 Score=35.88 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccch
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~ 417 (788)
+++....|.+.+.+++.+.|+|||-+|...-
T Consensus 90 ~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p 120 (333)
T 3n12_A 90 DNAAKDRFINSIQSLIDKYGFDGIDIDLESG 120 (333)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCSEEEEECCTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCCeEEEeccCC
Confidence 4567789999999999999999999998653
No 42
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=41.18 E-value=44 Score=35.94 Aligned_cols=24 Identities=21% Similarity=0.181 Sum_probs=19.6
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.|++.+++.+|+. |..=.+=+||+
T Consensus 81 ~~~~~~~~~vh~~-G~~i~~QL~H~ 104 (343)
T 3kru_A 81 KELKKIVDICKAN-GAVMGIQLAHA 104 (343)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECC
T ss_pred HHHHHHHHHHhcC-CceEeeehhhc
Confidence 4899999999997 74546778996
No 43
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=40.27 E-value=2.4e+02 Score=33.46 Aligned_cols=33 Identities=12% Similarity=0.041 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHHHHHHHHHH-cCCCEEEEcccchh
Q 003897 385 FVPPELVDQMYEGLHSHLEK-VGIDGVKVDVIHLL 418 (788)
Q Consensus 385 lv~P~~~~~FYd~l~~~Las-~GVDgVKvD~q~~l 418 (788)
.-+| .+++|.-+...|+.+ .||||+-+|+-..+
T Consensus 316 ~~~p-~V~~~l~~~l~~Wl~e~gvDGfR~Dav~~m 349 (755)
T 3aml_A 316 YANW-EVLRFLLSNLRYWMDEFMFDGFRFDGVTSM 349 (755)
T ss_dssp TTSH-HHHHHHHHHHHHHHHHHCCCEEEETTHHHH
T ss_pred cCCH-HHHHHHHHHHHHHHHHcCCCEEEecchhhh
Confidence 3344 567776666666555 99999999996543
No 44
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=37.28 E-value=52 Score=35.25 Aligned_cols=24 Identities=21% Similarity=0.427 Sum_probs=19.8
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.|+|.+++.+|+. |..=.+=+||+
T Consensus 81 ~~~~~~~~~vh~~-G~~i~~Ql~H~ 104 (349)
T 3hgj_A 81 PGLKELARRIREA-GAVPGIQLAHA 104 (349)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECC
T ss_pred HHHHHHHHHHHhC-CCeEEEEeccC
Confidence 4899999999997 74546778997
No 45
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina}
Probab=36.89 E-value=2.3e+02 Score=29.31 Aligned_cols=27 Identities=19% Similarity=0.433 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEccc
Q 003897 389 ELVDQMYEGLHSHLEKVGIDGVKVDVI 415 (788)
Q Consensus 389 ~~~~~FYd~l~~~Las~GVDgVKvD~q 415 (788)
.....||+.+.+++.+.|+|||-+|..
T Consensus 101 ~~~~~f~~~~~~~~~~~~~dG~D~d~e 127 (283)
T 4ac1_X 101 ATFEHYYGQLRDAIVNFQLEGMDLDVE 127 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCceEeecc
Confidence 455789999999999999999999975
No 46
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A*
Probab=36.50 E-value=37 Score=37.07 Aligned_cols=70 Identities=14% Similarity=0.072 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCCceeeecC
Q 003897 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASME 457 (788)
Q Consensus 386 v~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~CMs 457 (788)
.+++.-..|.+++.+++.+.|+|||-+|....... +....-+.|.+..+++|.+...++-.+.+.+.+++
T Consensus 125 ~~~~~R~~fi~siv~~l~~~gfDGiDiDwE~p~~~--~d~~n~~~ll~eLr~~l~~~~~~~~~~~~~~Lsia 194 (406)
T 3g6m_A 125 STEATRATFAKTAVEFMKDWGFDGIDVDWEYPASE--TDANNMVLLLQRVRQELDSYSATYANGYHFQLSIA 194 (406)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCSH--HHHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCcc--chhhHHHHHHHHHHHHHHHhhhhccCCCCeEEEEE
Confidence 35677789999999999999999999998643110 01112345666677777654333323445555554
No 47
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron}
Probab=34.62 E-value=99 Score=34.68 Aligned_cols=30 Identities=13% Similarity=0.107 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~ 416 (788)
+++...+|.+.+.+++...|+|||-+|+-+
T Consensus 261 s~~~r~~Fa~~v~~~v~~yglDGIDiDwEY 290 (451)
T 3poh_A 261 SEQGAKDFAREVAQYCKAYNLDGVNYDDEY 290 (451)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CHHHHHHHHHHHHHHHHHhCCCcEEEeccC
Confidence 346778999999999999999999999864
No 48
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=33.36 E-value=1.2e+02 Score=32.62 Aligned_cols=24 Identities=13% Similarity=0.255 Sum_probs=19.8
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.++|.+++.+|+. |..=.+=+||+
T Consensus 79 ~~~k~l~~avh~~-G~~i~~QL~H~ 102 (358)
T 4a3u_A 79 EAWLPITQAVHDA-GGLIFAQLWHM 102 (358)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred HHHHHHHHHHHhc-CCceeeccccc
Confidence 4899999999997 64556778997
No 49
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=33.09 E-value=1.1e+02 Score=36.69 Aligned_cols=31 Identities=19% Similarity=0.467 Sum_probs=27.0
Q ss_pred cCCCceeEeCCeEEe------------EEEcC--eEEEEEeeecC
Q 003897 747 SEKPRACKIDGNEVA------------FEYEG--HMVAIQVPWSS 777 (788)
Q Consensus 747 s~~P~~~~v~g~~v~------------~~~~~--~~l~v~~~w~e 777 (788)
+..|+.+.+||++++ |.||. +.|+|.++|..
T Consensus 764 ~~~p~~v~~~g~~~~~~~~~~~~~~~~~~yd~~~~~l~i~~~~~~ 808 (817)
T 4ba0_A 764 SDQYQHLDINGKTIAIAQADCASTPALACYDQERRQLQLVFTWGR 808 (817)
T ss_dssp CTTCCEEEETTEEEECBCSCGGGSCCSEEEETTTTEEEEEEEECS
T ss_pred CCCceEEEECCEEccccccchhccccceEEeCCCCEEEEEecCCC
Confidence 468999999999887 78977 89999999976
No 50
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=32.98 E-value=2.4e+02 Score=30.39 Aligned_cols=24 Identities=13% Similarity=0.231 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.|+|.+++.+|+. |..=.+=+||+
T Consensus 87 ~~~k~l~~avH~~-G~~i~~QL~H~ 110 (361)
T 3gka_A 87 DGWRLVTDAVHAA-GGRIFLQLWHV 110 (361)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred HHHHHHHHHHHhc-CCeEEEeeccC
Confidence 4899999999997 74446778996
No 51
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=32.71 E-value=72 Score=33.89 Aligned_cols=24 Identities=17% Similarity=0.328 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.+++.+++.+|+. |..=.+=+||+
T Consensus 83 ~~~~~~~~~vh~~-g~~i~~QL~h~ 106 (338)
T 1z41_A 83 EGFAKLTEQVKEQ-GSKIGIQLAHA 106 (338)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECC
T ss_pred HHHHHHHHHHHhc-CCEEEEEecCC
Confidence 3799999999997 63336778997
No 52
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=32.18 E-value=5.2e+02 Score=30.03 Aligned_cols=90 Identities=13% Similarity=0.127 Sum_probs=50.0
Q ss_pred CHHHHHHHHHhhcCCccEEEEEeeeccccCccCCCCCCCCCcceeeccCCCCCcccccccccccceeccCcCCCCHHHHH
Q 003897 313 GMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVD 392 (788)
Q Consensus 313 GLk~~V~~Ik~~fg~lk~VgvWHAl~GYWgGI~P~~~~~~~~s~l~~~~~spG~~~~~~d~a~~~i~~~Glglv~P~~~~ 392 (788)
=|..++-+++.+.| || ||.|+-..+|=-| +..+ +...+. +.. |-....++. ...+.--+ ++++
T Consensus 344 lf~~v~wql~~r~~-v~-vyAWmp~l~~~~~--~~~~---~~~~~~-~~~--~~~~~~~~~------~~~lsp~~-~~~~ 406 (618)
T 4f9d_A 344 IFSRVAWQLRTRSG-VN-IYAWMPVLSWDLD--PTLT---RVKYLP-TGE--KKAQIHPEQ------YHRLSPFD-DRVR 406 (618)
T ss_dssp CHHHHHHHHHHHHC-CE-EEEEECSSCBCCC--TTSC---BCCCCG-GGH--HHHHTCGGG------GGCBCTTC-HHHH
T ss_pred hHHHHHHHHhhhcC-CE-EEEeeehhhcccc--cccc---hhhhhh-ccc--ccCCcCccc------ccccCCCC-HHHH
Confidence 46777768888878 98 9999977653311 2211 111111 000 000000000 00122233 5788
Q ss_pred HHHHHHHHHHHHc-CCCEEEEcccchhh
Q 003897 393 QMYEGLHSHLEKV-GIDGVKVDVIHLLE 419 (788)
Q Consensus 393 ~FYd~l~~~Las~-GVDgVKvD~q~~l~ 419 (788)
+.+.+++.-|+.. .|||+=+|.-..+.
T Consensus 407 ~~~~~iy~dl~~~~~~dGilf~dd~~l~ 434 (618)
T 4f9d_A 407 AQVGMLYEDLAGHAAFDGILFHDDALLS 434 (618)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECTTCCCC
T ss_pred HHHHHHHHHHHhhCCCCeEEEcCccccc
Confidence 9999999877765 99999998766653
No 53
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5
Probab=31.69 E-value=99 Score=32.56 Aligned_cols=29 Identities=17% Similarity=0.156 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcccc
Q 003897 388 PELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (788)
Q Consensus 388 P~~~~~FYd~l~~~Las~GVDgVKvD~q~ 416 (788)
++...+|.+++..++.+.|+|||-+|...
T Consensus 105 ~~~r~~Fa~sv~~~v~~ygfDGiDiDwEy 133 (289)
T 2ebn_A 105 TARAKAFAQELKNTCDLYNLDGVFFDDEY 133 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEeeec
Confidence 46778999999999999999999999864
No 54
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=31.39 E-value=2.1e+02 Score=30.86 Aligned_cols=24 Identities=13% Similarity=0.335 Sum_probs=19.6
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.|+|.+++.+|+. |..=.+=+||+
T Consensus 79 ~~~k~l~~avH~~-G~~i~~QL~H~ 102 (362)
T 4ab4_A 79 RGWNNVTKAVHAA-GGRIFLQLWHV 102 (362)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred HHHHHHHHHHHhc-CCEEEEEeccC
Confidence 4899999999997 74446778996
No 55
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=29.87 E-value=92 Score=33.26 Aligned_cols=24 Identities=17% Similarity=0.266 Sum_probs=19.7
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.|+|.+++.+|+. |..=.+=+||+
T Consensus 83 ~~~~~~~~~vh~~-G~~i~~QL~H~ 106 (340)
T 3gr7_A 83 AGLRELVGLVKEH-GAAIGIQLAHA 106 (340)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECC
T ss_pred HHHHHHHHHHHhC-CCeEEEEeccC
Confidence 4899999999997 74546778997
No 56
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A
Probab=28.04 E-value=55 Score=35.53 Aligned_cols=69 Identities=22% Similarity=0.223 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCCceeeecC
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASME 457 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~CMs 457 (788)
+++.-..|.+++.+++.+.|+|||-+|...... .+....-+.|.+..+++|.+..+++-.+.+.+.+++
T Consensus 108 ~~~~r~~fi~siv~~l~~~~fDGiDiDwE~p~~--~~d~~~~~~ll~eLr~~l~~~~~~~~~~~~~~Ls~a 176 (392)
T 1ll7_A 108 TEEGRKKFADTSLKLMKDLGFDGIDIDWQYPED--EKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIA 176 (392)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCS--HHHHHHHHHHHHHHHHHHHHHHHTSTTSCCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCC--hHHHHHHHHHHHHHHHHHHhhhhcccCCCceEEEEE
Confidence 567778999999999999999999999864310 001112345566666666654333222345555554
No 57
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor}
Probab=27.62 E-value=1.2e+02 Score=31.87 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~ 416 (788)
+++....|.+.+.+++.+.|+|||-+|...
T Consensus 93 ~~~~r~~f~~~~~~~~~~~~~DGiDiD~E~ 122 (302)
T 3ebv_A 93 SSASATNFANSVYSVMREYGFDGVDIDLEN 122 (302)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCEEEEEECS
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEeccc
Confidence 457788999999999999999999999753
No 58
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A*
Probab=27.43 E-value=62 Score=36.42 Aligned_cols=67 Identities=13% Similarity=0.156 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCC---ceeeecC
Q 003897 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGN---GVIASME 457 (788)
Q Consensus 386 v~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~---~iI~CMs 457 (788)
.+++.-..|.+++.+++.+.|+|||-+|...... +....-+.|.+..+++|.+.-.+. ++ +.+.+++
T Consensus 115 ~~~~~r~~fi~siv~~~~~~gfDGiDiDwE~p~~---~d~~~~~~ll~eLr~~l~~~~~~~--g~~~~~~~Ls~a 184 (499)
T 1goi_A 115 KTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQA---AEVDGFIAALQEIRTLLNQQTITD--GRQALPYQLTIA 184 (499)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCH---HHHHHHHHHHHHHHHHHHHHHHHT--TCTTSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEecccCCh---hhHHHHHHHHHHHHHHhhhhhhhc--ccccCceEEEEe
Confidence 3567778999999999999999999999864320 111123455666666766543322 33 4555554
No 59
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=25.97 E-value=1.1e+02 Score=32.84 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=19.8
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.|+|.+++.+|+. |..=.+=+||+
T Consensus 80 ~~~~~~~~~vh~~-G~~i~~QL~H~ 103 (363)
T 3l5l_A 80 QAFVPVVQAIKAA-GSVPGIQIAHA 103 (363)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECC
T ss_pred HHHHHHHHHHHhc-CCEEEEEeccC
Confidence 4899999999997 74546778997
No 60
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=25.77 E-value=2.1e+02 Score=31.28 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=18.5
Q ss_pred CHHHHHHHHHhhcCCccEEEEEee
Q 003897 313 GMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 313 GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
|++.+++.+|+. |..=.+=+||+
T Consensus 94 ~~k~l~~avh~~-G~~i~~QL~H~ 116 (402)
T 2hsa_B 94 EWKKIVDVVHAK-GAVIFCQLWHV 116 (402)
T ss_dssp HHHHHHHHHHHT-TCEEEEEEECC
T ss_pred HHHHHHHHHHhc-CCeEEEEeccC
Confidence 899999999997 63436778996
No 61
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A*
Probab=25.31 E-value=61 Score=35.79 Aligned_cols=69 Identities=16% Similarity=0.113 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHHHHHhccCCCceeeecC
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASME 457 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~S~~~~F~g~~iI~CMs 457 (788)
+++.-..|.+++.+++.+.|+|||-+|...... .+....-+.|.+..+++|.+..+++-.+.+.+.+++
T Consensus 149 ~~~~R~~fi~siv~~l~~~gfDGIDiDwEyP~~--~~d~~nf~~ll~eLr~~l~~~~~~~~~~~~~~Ls~a 217 (433)
T 1w9p_A 149 TDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPEN--DQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVA 217 (433)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCcCceeEEEEeccC--hhHHHHHHHHHHHHHHHHHhhhhcccCCCceEEEEE
Confidence 567778999999999999999999999864310 001112345566666666653332222345555554
No 62
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=23.99 E-value=3.1e+02 Score=29.44 Aligned_cols=23 Identities=17% Similarity=0.310 Sum_probs=18.6
Q ss_pred CHHHHHHHHHhhcCCccEEEEEee
Q 003897 313 GMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 313 GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
+++.+++.+|+. |..=.+=+||+
T Consensus 82 ~~~~l~~~vh~~-g~~i~~QL~H~ 104 (364)
T 1vyr_A 82 AWKKITAGVHAE-DGRIAVQLWHT 104 (364)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEECC
T ss_pred HHHHHHHHHHhc-CCeEEEEeccC
Confidence 899999999997 63436778997
No 63
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=23.96 E-value=2.4e+02 Score=30.50 Aligned_cols=24 Identities=13% Similarity=0.351 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.+++.+++.+|+. |..=.+=+||+
T Consensus 85 ~~~k~l~~avh~~-G~~i~~QL~H~ 108 (377)
T 2r14_A 85 AGWKGVVEAVHAK-GGRIALQLWHV 108 (377)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEEECC
T ss_pred HHHHHHHHHHhhc-CCeEEEEccCC
Confidence 3899999999997 63436778997
No 64
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=23.61 E-value=2.3e+02 Score=32.80 Aligned_cols=24 Identities=4% Similarity=0.120 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.|++.+++.+|+. |..=.+=+||+
T Consensus 89 ~~~~~~~~~vh~~-g~~i~~Ql~h~ 112 (690)
T 3k30_A 89 PALKRIADAIHEG-GGLAGIELAHN 112 (690)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECC
T ss_pred HHHHHHHHHHHhc-CCEEEEEccCC
Confidence 4899999999997 63445678997
No 65
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=22.19 E-value=2.6e+02 Score=30.13 Aligned_cols=24 Identities=8% Similarity=0.310 Sum_probs=18.8
Q ss_pred CCHHHHHHHHHhhcCCccEEEEEee
Q 003897 312 KGMGAFIRDLKDEFKTVDQVYVWHA 336 (788)
Q Consensus 312 ~GLk~~V~~Ik~~fg~lk~VgvWHA 336 (788)
.+++.+++.+|+. |..=.+=+||+
T Consensus 91 ~~~k~l~~avh~~-G~~i~~QL~H~ 114 (376)
T 1icp_A 91 EAWKPIVDAVHAK-GGIFFCQIWHV 114 (376)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECC
T ss_pred HHHHHHHHHHHhc-CCeEEEEeecC
Confidence 3899999999997 63336678996
No 66
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp}
Probab=22.14 E-value=56 Score=34.62 Aligned_cols=27 Identities=15% Similarity=0.374 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccch
Q 003897 391 VDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (788)
Q Consensus 391 ~~~FYd~l~~~Las~GVDgVKvD~q~~ 417 (788)
..+|.+.+.+++.+.|+|||-+|....
T Consensus 100 r~~f~~~~~~~~~~~g~DGiDiD~E~p 126 (321)
T 3ian_A 100 ESDFVNEIIRLVDTYGFDGLDIDLEQA 126 (321)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECHH
T ss_pred HHHHHHHHHHHHHHhCCCeEEEecccC
Confidence 357999999999999999999998653
No 67
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A*
Probab=21.74 E-value=95 Score=35.40 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHHHHHcC-CCEEEEcccch
Q 003897 387 PPELVDQMYEGLHSHLEKVG-IDGVKVDVIHL 417 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~G-VDgVKvD~q~~ 417 (788)
+++.-..|.+++.++|.++| +|||-+|..+.
T Consensus 263 ~~~~R~~Fi~siv~~l~~yg~fDGIDIDWEyP 294 (540)
T 1edq_A 263 DKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFP 294 (540)
T ss_dssp SHHHHHHHHHHHHHHHHHCTTCCEEEEECSCT
T ss_pred CHHHHHHHHHHHHHHHHHcCCCceEEEEEEcc
Confidence 56777899999999999999 99999998643
No 68
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ...
Probab=21.18 E-value=1e+02 Score=32.78 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhhhhcccCCcchhHHHHHHHHHH
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTA 441 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~l~~l~~~~ggr~~l~~ay~~AL~~ 441 (788)
+++.-..|.+++.+++.+.|+|||-+|....... ....-+.|.+..+++|.+
T Consensus 91 ~~~~r~~fi~si~~~~~~~~fDGiDiDwE~p~~~---d~~~~~~ll~eLr~~l~~ 142 (361)
T 2pi6_A 91 KTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR---DKRHLTTLVKEMKAEFIR 142 (361)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCGG---GHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCCeEEEeeecCCch---HHHHHHHHHHHHHHHHhh
Confidence 5667789999999999999999999998643210 111223455556666654
No 69
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus}
Probab=20.71 E-value=2e+02 Score=29.71 Aligned_cols=30 Identities=23% Similarity=0.450 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~ 416 (788)
+++...+|.+.+.+++.+.|+|||-+|...
T Consensus 106 ~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~ 135 (290)
T 2y8v_A 106 DQEKFERYYQPLLAMVRRHQLDGLDLDVEE 135 (290)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEcccc
Confidence 456778999999999999999999999864
No 70
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=20.65 E-value=2e+02 Score=24.75 Aligned_cols=55 Identities=11% Similarity=0.189 Sum_probs=40.0
Q ss_pred EEEEecCChHHHHHHHHHHHHHhhccCCCCCCCCCCCcccCcccccccccccccCHHHHHHHHHHhHhCCCCCcEEEE
Q 003897 179 VYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLI 256 (788)
Q Consensus 179 ~~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~Vte~~V~~~l~~L~~~Gip~~~vII 256 (788)
+||-.=+|--.+|++|++++.+. ...+| +--|++.+...++.+.+..-.++.+|+
T Consensus 3 lyvliisndkklieearkmaeka--nlelr---------------------tvktedelkkyleefrkesqnikvlil 57 (110)
T 2kpo_A 3 LYVLIISNDKKLIEEARKMAEKA--NLELR---------------------TVKTEDELKKYLEEFRKESQNIKVLIL 57 (110)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHH--TCEEE---------------------ECCSHHHHHHHHHHHTSSTTSEEEEEE
T ss_pred EEEEEEcCcHHHHHHHHHHHHhc--Cceee---------------------eeccHHHHHHHHHHHHhhccCeEEEEE
Confidence 45544445588999999999885 33222 234789999999999887777777776
No 71
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Probab=20.56 E-value=87 Score=32.82 Aligned_cols=31 Identities=16% Similarity=0.332 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEcccch
Q 003897 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (788)
Q Consensus 387 ~P~~~~~FYd~l~~~Las~GVDgVKvD~q~~ 417 (788)
+++..++|.+++.+++.+.|+|||-+|....
T Consensus 92 ~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p 122 (319)
T 3cz8_A 92 NPTARTNLVNNIYDLVSTRGYGGVTIDFEQV 122 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEEEECCSC
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEeccCC
Confidence 5677789999999999999999999998653
Done!