Query 003907
Match_columns 787
No_of_seqs 484 out of 2308
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 07:57:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003907.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003907hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vyhc1 b.69.4.1 (C:92-408) Pl 99.9 3.1E-23 2.3E-27 208.7 34.3 298 52-459 13-317 (317)
2 d1gxra_ b.69.4.1 (A:) Groucho/ 99.9 1.7E-22 1.2E-26 212.7 35.4 275 54-460 49-335 (337)
3 d1nr0a1 b.69.4.1 (A:2-312) Act 99.9 1.7E-22 1.2E-26 212.7 32.3 239 74-472 28-279 (311)
4 d1nr0a1 b.69.4.1 (A:2-312) Act 99.9 8.6E-22 6.3E-26 207.3 32.5 241 52-461 54-311 (311)
5 d1erja_ b.69.4.1 (A:) Tup1, C- 99.9 6E-21 4.4E-25 201.5 33.5 262 54-473 60-350 (388)
6 d1tbga_ b.69.4.1 (A:) beta1-su 99.9 1E-19 7.5E-24 186.3 36.1 254 52-473 51-312 (340)
7 d2ovrb2 b.69.4.1 (B:2365-2706) 99.9 1.1E-19 8E-24 184.9 34.0 309 52-462 12-340 (342)
8 d1erja_ b.69.4.1 (A:) Tup1, C- 99.9 2.3E-19 1.6E-23 189.2 34.5 245 55-462 120-387 (388)
9 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 99.9 8.8E-20 6.4E-24 194.9 31.6 261 56-467 7-278 (371)
10 d1nr0a2 b.69.4.1 (A:313-611) A 99.9 8.2E-20 6E-24 186.7 30.0 243 52-466 8-259 (299)
11 d1pgua1 b.69.4.1 (A:2-326) Act 99.9 1.8E-19 1.3E-23 189.5 31.4 245 56-460 63-325 (325)
12 d1p22a2 b.69.4.1 (A:253-545) F 99.8 4E-18 2.9E-22 169.3 30.8 277 52-459 11-293 (293)
13 d1sq9a_ b.69.4.1 (A:) Antivira 99.8 1.9E-18 1.4E-22 185.9 28.5 117 342-476 198-334 (393)
14 d1vyhc1 b.69.4.1 (C:92-408) Pl 99.8 3.8E-18 2.7E-22 171.0 28.7 255 97-473 9-289 (317)
15 d1nexb2 b.69.4.1 (B:370-744) C 99.8 2.1E-17 1.5E-21 168.7 33.5 288 52-463 8-313 (355)
16 d1tbga_ b.69.4.1 (A:) beta1-su 99.8 2.9E-17 2.1E-21 167.8 33.6 236 52-459 93-340 (340)
17 d1nr0a2 b.69.4.1 (A:313-611) A 99.8 1E-17 7.4E-22 170.9 29.2 236 53-461 52-298 (299)
18 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 99.8 2.4E-17 1.7E-21 175.7 28.0 200 173-473 29-243 (371)
19 d1pgua1 b.69.4.1 (A:2-326) Act 99.8 2.2E-17 1.6E-21 173.2 26.3 244 55-464 16-284 (325)
20 d1k32a3 b.69.9.1 (A:320-679) T 99.8 1.1E-16 7.8E-21 165.6 31.0 190 74-400 14-208 (360)
21 d1yfqa_ b.69.4.2 (A:) Cell cyc 99.8 2.6E-17 1.9E-21 166.3 25.3 291 52-461 7-322 (342)
22 d1pgua2 b.69.4.1 (A:327-613) A 99.8 1.2E-16 8.7E-21 162.1 28.9 97 344-460 179-286 (287)
23 d1pgua2 b.69.4.1 (A:327-613) A 99.7 3.3E-16 2.4E-20 158.8 28.0 233 52-473 9-258 (287)
24 d2ovrb2 b.69.4.1 (B:2365-2706) 99.7 2.5E-16 1.8E-20 159.7 26.1 247 173-463 37-290 (342)
25 d1gxra_ b.69.4.1 (A:) Groucho/ 99.7 6.7E-16 4.9E-20 161.7 29.9 233 54-399 95-335 (337)
26 d1nexb2 b.69.4.1 (B:370-744) C 99.7 6.4E-15 4.7E-19 149.9 30.0 236 173-463 33-273 (355)
27 d1sq9a_ b.69.4.1 (A:) Antivira 99.7 3.3E-15 2.4E-19 160.2 28.1 83 348-450 255-354 (393)
28 d1pbyb_ b.69.2.2 (B:) Quinohem 99.6 9.7E-14 7.1E-18 141.3 32.8 280 76-465 2-313 (337)
29 d1yfqa_ b.69.4.2 (A:) Cell cyc 99.6 2.2E-14 1.6E-18 144.3 25.3 263 97-464 3-284 (342)
30 d1p22a2 b.69.4.1 (A:253-545) F 99.6 1.5E-13 1.1E-17 135.6 30.3 211 173-462 35-247 (293)
31 d1l0qa2 b.69.2.3 (A:1-301) Sur 99.6 9.1E-13 6.6E-17 132.3 35.7 261 78-463 5-276 (301)
32 d1hzua2 b.70.2.1 (A:118-543) C 99.6 8.3E-14 6E-18 151.4 28.7 103 345-465 272-400 (426)
33 d1jmxb_ b.69.2.2 (B:) Quinohem 99.6 2.6E-13 1.9E-17 138.6 26.9 290 74-466 7-326 (346)
34 d1k32a3 b.69.9.1 (A:320-679) T 99.5 1.2E-12 9E-17 134.5 23.0 171 173-463 24-210 (360)
35 d1ri6a_ b.69.11.1 (A:) Putativ 99.3 2.6E-10 1.9E-14 115.9 29.1 283 76-466 5-311 (333)
36 d1qksa2 b.70.2.1 (A:136-567) C 99.3 1.8E-10 1.3E-14 126.1 28.5 181 173-463 42-239 (432)
37 d1hzua2 b.70.2.1 (A:118-543) C 99.3 2.7E-10 2E-14 123.0 25.9 250 173-465 42-344 (426)
38 d1l0qa2 b.69.2.3 (A:1-301) Sur 99.3 1.7E-09 1.3E-13 107.8 28.7 174 173-463 12-190 (301)
39 d1qksa2 b.70.2.1 (A:136-567) C 99.2 5.9E-09 4.3E-13 113.7 33.5 191 77-401 34-238 (432)
40 d2bbkh_ b.69.2.1 (H:) Methylam 99.1 1.4E-08 9.9E-13 104.3 29.0 102 344-465 211-335 (355)
41 d1pbyb_ b.69.2.2 (B:) Quinohem 99.0 1.5E-08 1.1E-12 102.0 23.8 145 172-401 10-163 (337)
42 d2madh_ b.69.2.1 (H:) Methylam 99.0 2.3E-07 1.7E-11 96.0 30.3 67 382-469 289-357 (373)
43 d1ri6a_ b.69.11.1 (A:) Putativ 98.9 3.7E-07 2.7E-11 92.0 29.5 186 173-465 14-211 (333)
44 d1jmxb_ b.69.2.2 (B:) Quinohem 98.6 8.8E-08 6.4E-12 96.6 13.6 105 342-463 11-132 (346)
45 d1mdah_ b.69.2.1 (H:) Methylam 98.6 1.6E-06 1.2E-10 90.4 23.1 57 173-229 96-164 (368)
46 d2madh_ b.69.2.1 (H:) Methylam 98.5 1.8E-06 1.3E-10 88.9 19.6 98 346-466 94-200 (373)
47 d2bbkh_ b.69.2.1 (H:) Methylam 98.5 3.4E-06 2.5E-10 85.8 21.4 179 173-463 28-226 (355)
48 d2bgra1 b.70.3.1 (A:39-508) Di 98.3 2.1E-06 1.5E-10 92.7 14.7 107 347-462 90-202 (470)
49 d1qnia2 b.69.3.1 (A:10-450) Ni 98.2 7.3E-05 5.3E-09 81.5 23.6 223 172-461 93-341 (441)
50 d1jofa_ b.69.10.1 (A:) 3-carbo 98.0 0.00078 5.7E-08 70.6 27.3 79 371-463 256-342 (365)
51 d1mdah_ b.69.2.1 (H:) Methylam 98.0 1.7E-05 1.2E-09 82.4 12.1 99 347-464 44-157 (368)
52 d2bgra1 b.70.3.1 (A:39-508) Di 97.9 1.8E-05 1.3E-09 85.1 10.5 96 347-463 34-142 (470)
53 d1qnia2 b.69.3.1 (A:10-450) Ni 97.6 0.0014 1E-07 71.1 21.4 110 349-462 156-289 (441)
54 d2hqsa1 b.68.4.1 (A:163-431) T 97.5 0.027 1.9E-06 54.2 27.3 92 350-461 152-246 (269)
55 d1q7fa_ b.68.9.1 (A:) Brain tu 97.2 0.12 8.4E-06 50.9 32.4 96 348-463 177-274 (279)
56 d1jofa_ b.69.10.1 (A:) 3-carbo 96.9 0.057 4.1E-06 55.8 23.7 81 371-465 146-227 (365)
57 d2p4oa1 b.68.6.3 (A:4-305) Hyp 96.4 0.56 4.1E-05 46.2 27.6 63 372-453 210-275 (302)
58 d2ghsa1 b.68.6.1 (A:20-314) Re 96.2 0.73 5.3E-05 45.6 26.1 50 173-223 40-90 (295)
59 d1utca2 b.69.6.1 (A:4-330) Cla 95.7 1.3 9.6E-05 44.7 27.2 47 173-219 83-130 (327)
60 d1xfda1 b.70.3.1 (A:127-591) D 95.2 0.056 4.1E-06 58.0 12.9 98 348-464 90-206 (465)
61 d1rwia_ b.68.9.1 (A:) Serine/t 95.1 1.5 0.00011 41.8 24.4 94 349-464 161-254 (260)
62 d2hqsa1 b.68.4.1 (A:163-431) T 95.0 1.3 9.4E-05 41.6 21.2 50 174-223 20-75 (269)
63 d1q7fa_ b.68.9.1 (A:) Brain tu 94.6 0.67 4.9E-05 45.1 18.2 92 350-461 94-186 (279)
64 d1k32a2 b.68.7.1 (A:39-319) Tr 94.1 0.17 1.2E-05 48.1 12.0 85 348-451 20-114 (281)
65 d2p4oa1 b.68.6.3 (A:4-305) Hyp 94.0 0.15 1.1E-05 50.6 11.8 98 346-462 46-143 (302)
66 d1xfda1 b.70.3.1 (A:127-591) D 91.4 0.11 8.4E-06 55.5 6.8 97 346-461 34-142 (465)
67 d1pjxa_ b.68.6.1 (A:) Diisopro 89.2 1.5 0.00011 43.6 12.9 100 347-466 196-303 (314)
68 d1k32a2 b.68.7.1 (A:39-319) Tr 89.0 0.45 3.3E-05 44.9 8.2 69 376-466 5-79 (281)
69 d2dg1a1 b.68.6.1 (A:6-324) Lac 85.3 18 0.0013 35.2 25.9 75 372-459 179-255 (319)
70 d1utca2 b.69.6.1 (A:4-330) Cla 82.4 12 0.00086 37.5 15.1 196 348-586 82-286 (327)
71 d1k3ia3 b.69.1.1 (A:151-537) G 81.8 2.4 0.00018 42.0 10.0 95 350-462 53-156 (387)
72 d1rwia_ b.68.9.1 (A:) Serine/t 79.8 5.4 0.00039 37.7 11.4 71 371-461 141-211 (260)
73 d2dg1a1 b.68.6.1 (A:6-324) Lac 79.1 30 0.0022 33.4 32.5 71 372-461 230-308 (319)
74 d2ad6a1 b.70.1.1 (A:1-571) Met 67.5 80 0.0058 33.2 23.3 81 347-451 442-527 (571)
75 d1fwxa2 b.69.3.1 (A:8-451) Nit 66.9 13 0.00096 38.9 11.0 112 348-463 172-307 (459)
76 d1pjxa_ b.68.6.1 (A:) Diisopro 64.8 17 0.0012 35.4 11.2 100 348-461 152-255 (314)
77 d1flga_ b.70.1.1 (A:) Ethanol 60.7 9.1 0.00066 41.2 8.7 85 346-450 463-548 (582)
78 d1kb0a2 b.70.1.1 (A:1-573) Qui 59.9 11 0.00081 40.4 9.3 83 349-451 457-540 (573)
79 d1qfma1 b.69.7.1 (A:1-430) Pro 54.9 38 0.0028 34.1 12.2 99 345-460 147-264 (430)
80 d1qfma1 b.69.7.1 (A:1-430) Pro 53.3 11 0.00083 38.4 7.6 64 368-452 123-191 (430)
81 d1fwxa2 b.69.3.1 (A:8-451) Nit 53.2 1.3E+02 0.0095 31.0 18.9 102 351-462 254-359 (459)
82 d1flga_ b.70.1.1 (A:) Ethanol 52.6 20 0.0014 38.3 9.8 57 173-229 466-525 (582)
83 d2ghsa1 b.68.6.1 (A:20-314) Re 52.3 96 0.007 29.2 33.1 62 369-451 198-260 (295)
84 d1h6la_ b.68.3.1 (A:) Thermost 51.3 47 0.0034 33.2 11.9 159 378-591 37-215 (353)
85 d1kb0a2 b.70.1.1 (A:1-573) Qui 48.5 18 0.0013 38.6 8.5 57 173-229 457-516 (573)
86 d2ad6a1 b.70.1.1 (A:1-571) Met 45.0 31 0.0022 36.7 9.8 57 173-229 444-503 (571)
87 d1w6sa_ b.70.1.1 (A:) Methanol 44.2 24 0.0018 37.8 8.8 84 348-451 452-536 (596)
88 d1kv9a2 b.70.1.1 (A:1-560) Qui 43.4 39 0.0028 35.7 10.3 87 347-453 436-523 (560)
89 d1kv9a2 b.70.1.1 (A:1-560) Qui 39.6 30 0.0022 36.6 8.5 58 172-229 437-497 (560)
90 d1v04a_ b.68.6.2 (A:) Serum pa 33.4 87 0.0063 30.6 10.4 32 370-401 206-237 (340)
91 d1w6sa_ b.70.1.1 (A:) Methanol 29.4 41 0.003 35.9 7.5 57 173-229 453-512 (596)
92 d1v04a_ b.68.6.2 (A:) Serum pa 26.4 1.7E+02 0.012 28.4 11.2 97 348-464 123-239 (340)
No 1
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.93 E-value=3.1e-23 Score=208.67 Aligned_cols=298 Identities=12% Similarity=0.085 Sum_probs=197.3
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccC
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLH 130 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~sr 130 (787)
..+|++.|..+.|.. ++++|++|..+| ++|||++. +++...+..|.++|..+.+.|+ .
T Consensus 13 L~GH~~~I~~l~~sp-------~~~~l~s~s~Dg~i~iWd~~~-~~~~~~~~~h~~~V~~~~~~~~-------------~ 71 (317)
T d1vyhc1 13 LSGHRSPVTRVIFHP-------VFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHS-------------G 71 (317)
T ss_dssp EECCSSCEEEEEECS-------SSSEEEEEESSSCEEEEETTT-CCCCEEECCCSSCEEEEEECTT-------------S
T ss_pred EcCCCCCeEEEEEcC-------CCCEEEEEeCCCeEEEEECCC-CCEEEEEeCCCCcEEEEeeecc-------------c
Confidence 467999999999974 356888888876 99999964 6677788889999999998864 2
Q ss_pred cEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeC-CCcEEEEEecC--CeEEE
Q 003907 131 PFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRF-RSSVCMVRCSP--RIVAV 207 (787)
Q Consensus 131 pLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f-~s~V~sV~~s~--~~LaV 207 (787)
.+++.... ..++.+|+....+....+.. ...+..+.+++ +.|++
T Consensus 72 ~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (317)
T d1vyhc1 72 KLLASCSA---------------------------------DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118 (317)
T ss_dssp SEEEEEET---------------------------------TSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEE
T ss_pred cccccccc---------------------------------ccccccccccccccccccccccccceeeeccCCCceEEe
Confidence 36654321 14677899888887766654 45788888876 56666
Q ss_pred Ee-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCC
Q 003907 208 GL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSP 284 (787)
Q Consensus 208 ~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~ 284 (787)
+. +..+++||+.+++.+.++..+... ...++++| ++||.++.+..+ ..|+..+......
T Consensus 119 ~~~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~d~~v-----~~~~~~~~~~~~~ 180 (317)
T d1vyhc1 119 ASRDKTIKMWEVQTGYCVKTFTGHREW-------------VRMVRPNQDGTLIASCSNDQTV-----RVWVVATKECKAE 180 (317)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSC-------------EEEEEECTTSSEEEEEETTSCE-----EEEETTTCCEEEE
T ss_pred eccCcceeEeecccceeeeEEccCCCc-------------ceeeecccCCCEEEEEeCCCeE-----EEEeeccceeeEE
Confidence 54 568999999999998888876542 34567777 788887654211 0111111000000
Q ss_pred CcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEE
Q 003907 285 STSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQ 364 (787)
Q Consensus 285 s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~ 364 (787)
-....+.........+........ ..+.. .... ...+.....+..||.|++||+.+++.+..
T Consensus 181 ~~~~~~~i~~~~~~~~~~~~~~~~-------------~~~~~-~~~~----~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 242 (317)
T d1vyhc1 181 LREHRHVVECISWAPESSYSSISE-------------ATGSE-TKKS----GKPGPFLLSGSRDKTIKMWDVSTGMCLMT 242 (317)
T ss_dssp ECCCSSCEEEEEECCSCGGGGGGG-------------CCSCC------------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EecCCCCceEEEEeeccccceeec-------------cccce-eeee----ccCCceeEeccCCCEEEEEECCCCcEEEE
Confidence 000000000000000000000000 00000 0000 00111233567899999999999999999
Q ss_pred eccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCC
Q 003907 365 FKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQ 444 (787)
Q Consensus 365 ~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~ 444 (787)
+.+|..+|.+++|+|+|++||+++.||. |+|||+.. + ..+..+. + +...|++|+|+||++
T Consensus 243 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~-i~iwd~~~-------~----------~~~~~~~-~-h~~~V~~~~~s~~~~ 302 (317)
T d1vyhc1 243 LVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKN-------K----------RCMKTLN-A-HEHFVTSLDFHKTAP 302 (317)
T ss_dssp EECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTT-------S----------CCCEEEE-C-CSSCEEEEEECSSSS
T ss_pred EeCCCCCEEEEEECCCCCEEEEEECCCe-EEEEECCC-------C----------cEEEEEc-C-CCCCEEEEEEcCCCC
Confidence 9999999999999999999999999775 99999854 2 3455564 3 345799999999999
Q ss_pred EEEEEeCCCeEEEEe
Q 003907 445 WIAIVSSKGTCHVFV 459 (787)
Q Consensus 445 ~LAs~S~dgTVhIwd 459 (787)
+|++++.||+|+|||
T Consensus 303 ~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 303 YVVTGSVDQTVKVWE 317 (317)
T ss_dssp CEEEEETTSEEEEEC
T ss_pred EEEEEeCCCeEEEeC
Confidence 999999999999997
No 2
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.7e-22 Score=212.69 Aligned_cols=275 Identities=13% Similarity=0.046 Sum_probs=188.8
Q ss_pred CCCCcEEEEEEeeccCCCCCCCeEEEEEecCcEEEEEccCCCceeE----eeeeccCcEEEEEEecCCCCCCCCCCcccc
Q 003907 54 DLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNGFQVLDVEDASNFNE----LVSKRDGPVSFLQMQPFPVKDDGCEGFRKL 129 (787)
Q Consensus 54 ~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G~qVWdv~~~~~~~e----lls~~dg~V~~v~~lP~P~~~~~~d~F~~s 129 (787)
+|++.|..+.|.. +++.|++|.++.++|||++....... ....|+++|.+|++.|+.
T Consensus 49 ~H~~~V~~v~fs~-------~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg------------ 109 (337)
T d1gxra_ 49 NHGEVVCAVTISN-------PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG------------ 109 (337)
T ss_dssp CCSSCCCEEEECS-------SSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS------------
T ss_pred CCCCcEEEEEECC-------CCCEEEEEECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCC------------
Confidence 5788899999964 46789999876699999976433222 123578899999999752
Q ss_pred CcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCC--eEEEEEeCC-CcEEEEEecC--Ce
Q 003907 130 HPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSH--CYEHVLRFR-SSVCMVRCSP--RI 204 (787)
Q Consensus 130 rpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg--~~v~tL~f~-s~V~sV~~s~--~~ 204 (787)
.+|++.+. +++|++||+... +....+..+ ..|..+.+++ .+
T Consensus 110 -~~l~s~~~---------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 155 (337)
T d1gxra_ 110 -CTLIVGGE---------------------------------ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKV 155 (337)
T ss_dssp -SEEEEEES---------------------------------SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSE
T ss_pred -CEEEEeec---------------------------------cccccccccccccccccccccccccccccccccccccc
Confidence 26654321 258999998754 556666654 4788999987 56
Q ss_pred EEEEe-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCC
Q 003907 205 VAVGL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSG 281 (787)
Q Consensus 205 LaV~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~ 281 (787)
|+++. +..|++||+.+++.......+..+ ...+++++ .++++++.+..+ ..|+..+.
T Consensus 156 l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~-------------v~~l~~s~~~~~~~~~~~d~~v-----~i~d~~~~-- 215 (337)
T d1gxra_ 156 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-------------ASCIDISNDGTKLWTGGLDNTV-----RSWDLREG-- 215 (337)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSC-------------EEEEEECTTSSEEEEEETTSEE-----EEEETTTT--
T ss_pred cccccccccccccccccccccccccccccc-------------cccccccccccccccccccccc-----cccccccc--
Confidence 77655 457999999999877766655442 34577777 677777654211 11221110
Q ss_pred cCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcE
Q 003907 282 VSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAI 361 (787)
Q Consensus 282 ~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~ 361 (787)
..+ +.+. ..+....+.+++..+ .++.+..+|.+++||+.+++.
T Consensus 216 ----------~~~----------------~~~~-------~~~~i~~l~~~~~~~----~l~~~~~d~~i~i~d~~~~~~ 258 (337)
T d1gxra_ 216 ----------RQL----------------QQHD-------FTSQIFSLGYCPTGE----WLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp ----------EEE----------------EEEE-------CSSCEEEEEECTTSS----EEEEEETTSCEEEEETTSSCE
T ss_pred ----------eee----------------cccc-------cccceEEEEEccccc----ccceecccccccccccccccc
Confidence 000 0000 000011122222222 234567899999999998876
Q ss_pred EEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEcc
Q 003907 362 ISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSH 441 (787)
Q Consensus 362 v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSp 441 (787)
. ....|..+|.+++|+|+|++|+|++.|| .|+|||+.. + ..+..+. +...|.+++|||
T Consensus 259 ~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg-~i~iwd~~~-------~----------~~~~~~~---~~~~v~~~~~s~ 316 (337)
T d1gxra_ 259 Y-QLHLHESCVLSLKFAYCGKWFVSTGKDN-LLNAWRTPY-------G----------ASIFQSK---ESSSVLSCDISV 316 (337)
T ss_dssp E-EECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTT-------C----------CEEEEEE---CSSCEEEEEECT
T ss_pred c-cccccccccceEEECCCCCEEEEEeCCC-eEEEEECCC-------C----------CEEEEcc---CCCCEEEEEEeC
Confidence 4 5678999999999999999999999966 599999854 2 3555443 335799999999
Q ss_pred CCCEEEEEeCCCeEEEEeC
Q 003907 442 YSQWIAIVSSKGTCHVFVL 460 (787)
Q Consensus 442 Dg~~LAs~S~dgTVhIwdl 460 (787)
|+++|++++.||+|+||||
T Consensus 317 d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 317 DDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TSCEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEE
Confidence 9999999999999999997
No 3
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.91 E-value=1.7e-22 Score=212.69 Aligned_cols=239 Identities=12% Similarity=0.077 Sum_probs=175.8
Q ss_pred CCeEEEEEecCcEEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCCC
Q 003907 74 FKQVLLLGYQNGFQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSHL 153 (787)
Q Consensus 74 ~~~vL~lG~~~G~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~~ 153 (787)
+++.|+.+..+.+.+||++. .+..+++..|.++|.++++.|+ ..+||+.+.
T Consensus 28 ~g~~l~~~~~~~v~i~~~~~-~~~~~~~~~H~~~v~~~~~sp~-------------g~~latg~~--------------- 78 (311)
T d1nr0a1 28 AGDKIQYCNGTSVYTVPVGS-LTDTEIYTEHSHQTTVAKTSPS-------------GYYCASGDV--------------- 78 (311)
T ss_dssp TSSEEEEEETTEEEEEETTC-SSCCEEECCCSSCEEEEEECTT-------------SSEEEEEET---------------
T ss_pred CCCEEEEEeCCEEEEEECCC-CceeEEEcCCCCCEEEEEEeCC-------------CCeEecccc---------------
Confidence 35678888888899999964 5677788899999999999975 237765221
Q ss_pred CCcccCCcCCCCCCCCCCCCEEEEEECCCCeEE--EEEe-CCCcEEEEEecC--CeEEEEeCC---eEEEEECCCCceeE
Q 003907 154 GGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYE--HVLR-FRSSVCMVRCSP--RIVAVGLAT---QIYCFDALTLENKF 225 (787)
Q Consensus 154 ~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v--~tL~-f~s~V~sV~~s~--~~LaV~~~~---~I~iwD~~T~e~l~ 225 (787)
+++|+|||+.+++.+ .+++ +...|.+|++++ ++|+++.++ .+++||..+++...
T Consensus 79 ------------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~ 140 (311)
T d1nr0a1 79 ------------------HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNG 140 (311)
T ss_dssp ------------------TSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCB
T ss_pred ------------------CceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccccccccc
Confidence 368999999987643 4455 456999999998 567766543 48999999988777
Q ss_pred EEEecCCcccCCCCccccccccceeEEccceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhh
Q 003907 226 SVLTYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQF 305 (787)
Q Consensus 226 tl~t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~l 305 (787)
++..|..+ ...++++| +. ..
T Consensus 141 ~l~~h~~~-------------v~~v~~~~-------~~---------------------------~~------------- 160 (311)
T d1nr0a1 141 NLTGQARA-------------MNSVDFKP-------SR---------------------------PF------------- 160 (311)
T ss_dssp CCCCCSSC-------------EEEEEECS-------SS---------------------------SC-------------
T ss_pred cccccccc-------------cccccccc-------cc---------------------------ee-------------
Confidence 66554432 12233322 10 00
Q ss_pred hcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEE
Q 003907 306 AAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLV 385 (787)
Q Consensus 306 a~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLA 385 (787)
.++++..||.|++||+.+++.+..+..|..+|.+++|+|+|++|+
T Consensus 161 -----------------------------------~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~ 205 (311)
T d1nr0a1 161 -----------------------------------RIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFA 205 (311)
T ss_dssp -----------------------------------EEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred -----------------------------------eecccccccccccccccccccccccccccccccccccCccccccc
Confidence 012345689999999999999999999999999999999999999
Q ss_pred EEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecc-----cccccEEEEEEccCCCEEEEEeCCCeEEEEeC
Q 003907 386 TASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRG-----ITSATIQDICFSHYSQWIAIVSSKGTCHVFVL 460 (787)
Q Consensus 386 TaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG-----~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl 460 (787)
+++.||. |+|||+.. + ..+..+... .+.+.|.+|+|+|||++|++++.||+|+|||+
T Consensus 206 ~~~~d~~-v~~~d~~~-------~----------~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~ 267 (311)
T d1nr0a1 206 STGGDGT-IVLYNGVD-------G----------TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 267 (311)
T ss_dssp EEETTSC-EEEEETTT-------C----------CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ccccccc-cccccccc-------c----------cccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEEC
Confidence 9999776 99999854 2 233333221 12356999999999999999999999999999
Q ss_pred CCCCCccccccc
Q 003907 461 SPFGGDSGFQTL 472 (787)
Q Consensus 461 ~~~gg~~~~~~H 472 (787)
++......+..|
T Consensus 268 ~t~~~~~~l~~~ 279 (311)
T d1nr0a1 268 ATLKVEKTIPVG 279 (311)
T ss_dssp TTTEEEEEEECC
T ss_pred CCCcEEEEEECC
Confidence 865433333333
No 4
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.90 E-value=8.6e-22 Score=207.25 Aligned_cols=241 Identities=16% Similarity=0.161 Sum_probs=176.3
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCce-eEeeeeccCcEEEEEEecCCCCCCCCCCcccc
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNF-NELVSKRDGPVSFLQMQPFPVKDDGCEGFRKL 129 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~-~ells~~dg~V~~v~~lP~P~~~~~~d~F~~s 129 (787)
..+|++.|+.+.|.. +++.|++|..+| ++|||+...... ...+..|.++|.+|++.|+
T Consensus 54 ~~~H~~~v~~~~~sp-------~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d------------- 113 (311)
T d1nr0a1 54 YTEHSHQTTVAKTSP-------SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE------------- 113 (311)
T ss_dssp ECCCSSCEEEEEECT-------TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT-------------
T ss_pred EcCCCCCEEEEEEeC-------CCCeEeccccCceEeeeeeeccccccccccccccCcccccccccc-------------
Confidence 356889999999952 467888888876 999999765443 3457788899999999864
Q ss_pred CcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCC-CcEEEEEecC--C-eE
Q 003907 130 HPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFR-SSVCMVRCSP--R-IV 205 (787)
Q Consensus 130 rpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~-s~V~sV~~s~--~-~L 205 (787)
..+|++++.+ ..+.+++|++++++.+.++..+ ..|.+|+|++ + +|
T Consensus 114 ~~~l~~~~~~-------------------------------~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l 162 (311)
T d1nr0a1 114 SKRIAAVGEG-------------------------------RERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRI 162 (311)
T ss_dssp SCEEEEEECC-------------------------------SSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEE
T ss_pred cccccccccc-------------------------------ccccccccccccccccccccccccccccccccccceeee
Confidence 2366654321 1257999999999999988866 4799999987 3 46
Q ss_pred EEEe-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCc
Q 003907 206 AVGL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGV 282 (787)
Q Consensus 206 aV~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~ 282 (787)
+++. ++.|++||+.+++....+..|..+ ...++++| ++|
T Consensus 163 ~sgs~d~~i~i~d~~~~~~~~~~~~~~~~-------------i~~v~~~p~~~~l------------------------- 204 (311)
T d1nr0a1 163 ISGSDDNTVAIFEGPPFKFKSTFGEHTKF-------------VHSVRYNPDGSLF------------------------- 204 (311)
T ss_dssp EEEETTSCEEEEETTTBEEEEEECCCSSC-------------EEEEEECTTSSEE-------------------------
T ss_pred ccccccccccccccccccccccccccccc-------------ccccccCcccccc-------------------------
Confidence 6554 567999999999887777665442 12233322 111
Q ss_pred CCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEE
Q 003907 283 SPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAII 362 (787)
Q Consensus 283 s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v 362 (787)
+.+..||.|++||+.+++.+
T Consensus 205 ------------------------------------------------------------~~~~~d~~v~~~d~~~~~~~ 224 (311)
T d1nr0a1 205 ------------------------------------------------------------ASTGGDGTIVLYNGVDGTKT 224 (311)
T ss_dssp ------------------------------------------------------------EEEETTSCEEEEETTTCCEE
T ss_pred ------------------------------------------------------------cccccccccccccccccccc
Confidence 12345789999999988877
Q ss_pred EEec-------cCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEeccccc-ccE
Q 003907 363 SQFK-------AHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITS-ATI 434 (787)
Q Consensus 363 ~~~~-------aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~-a~I 434 (787)
..+. +|..+|.+|+|+|+|++|||++.|| .|+|||+.. + ..+.++..+... ..+
T Consensus 225 ~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg-~v~iwd~~t-------~----------~~~~~l~~~~~~~~~~ 286 (311)
T d1nr0a1 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-TIKIWNVAT-------L----------KVEKTIPVGTRIEDQQ 286 (311)
T ss_dssp EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-EEEEEETTT-------T----------EEEEEEECCSSGGGCE
T ss_pred ccccccccccccccccccccccCCCCCEEEEEeCCC-eEEEEECCC-------C----------cEEEEEECCCCccceE
Confidence 7664 6899999999999999999999966 599999864 3 466666543221 234
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEeCC
Q 003907 435 QDICFSHYSQWIAIVSSKGTCHVFVLS 461 (787)
Q Consensus 435 ~slaFSpDg~~LAs~S~dgTVhIwdl~ 461 (787)
.++.| ++++|++++.||+|++||++
T Consensus 287 ~~~~~--~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 287 LGIIW--TKQALVSISANGFINFVNPE 311 (311)
T ss_dssp EEEEE--CSSCEEEEETTCCEEEEETT
T ss_pred EEEEe--cCCEEEEEECCCEEEEEeCC
Confidence 45555 55679999999999999974
No 5
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=6e-21 Score=201.46 Aligned_cols=262 Identities=15% Similarity=0.105 Sum_probs=176.8
Q ss_pred CCCCcEEEEEEeeccCCCCCCCeEEEEEecCcEEEEEccCCCceeEeee------------------eccCcEEEEEEec
Q 003907 54 DLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNGFQVLDVEDASNFNELVS------------------KRDGPVSFLQMQP 115 (787)
Q Consensus 54 ~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G~qVWdv~~~~~~~ells------------------~~dg~V~~v~~lP 115 (787)
+|++.|..+.|+. ++++|++|.++.++|||+.. ++....+. .++..|.+|++.|
T Consensus 60 ~H~~~V~~l~fs~-------dg~~lasg~d~~i~iW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 131 (388)
T d1erja_ 60 DHTSVVCCVKFSN-------DGEYLATGCNKTTQVYRVSD-GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131 (388)
T ss_dssp ECSSCCCEEEECT-------TSSEEEEECBSCEEEEETTT-CCEEEEECC-----------------CCCCBEEEEEECT
T ss_pred CCCCcEEEEEECC-------CCCEEEEEeCCeEEEEEecc-cceEeeecccccccccccccccccccCCCCCEEEEEECC
Confidence 5889999999974 46799999877899999965 43333332 2445688888876
Q ss_pred CCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCC-Cc
Q 003907 116 FPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFR-SS 194 (787)
Q Consensus 116 ~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~-s~ 194 (787)
+ ..+|++.+. +++|++||..+++.+..+..+ ..
T Consensus 132 ~-------------~~~l~s~~~---------------------------------dg~v~i~~~~~~~~~~~~~~h~~~ 165 (388)
T d1erja_ 132 D-------------GKFLATGAE---------------------------------DRLIRIWDIENRKIVMILQGHEQD 165 (388)
T ss_dssp T-------------SSEEEEEET---------------------------------TSCEEEEETTTTEEEEEECCCSSC
T ss_pred C-------------CCcceeccc---------------------------------cccccccccccccccccccccccc
Confidence 4 236654221 258999999999999998854 68
Q ss_pred EEEEEecC--CeEEEEe-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEccceEEEecCCceecCcce
Q 003907 195 VCMVRCSP--RIVAVGL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGR 271 (787)
Q Consensus 195 V~sV~~s~--~~LaV~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~ 271 (787)
|..+.+++ ..++++. ++.|++||..+.........+... ..+++ ...+
T Consensus 166 v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------------~~~~~-------~~~~-------- 216 (388)
T d1erja_ 166 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV--------------TTVAV-------SPGD-------- 216 (388)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE--------------EEEEE-------CSTT--------
T ss_pred ccccccccccccccccccceeeeeeecccccccccccccccc--------------ccccc-------cCCC--------
Confidence 99999987 4555554 568999999887765544332110 01111 1000
Q ss_pred eccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceE
Q 003907 272 LSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIV 351 (787)
Q Consensus 272 ~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V 351 (787)
+. .++.+..||.|
T Consensus 217 -------------------~~------------------------------------------------~l~~~~~d~~i 229 (388)
T d1erja_ 217 -------------------GK------------------------------------------------YIAAGSLDRAV 229 (388)
T ss_dssp -------------------CC------------------------------------------------EEEEEETTSCE
T ss_pred -------------------CC------------------------------------------------eEEEEcCCCeE
Confidence 00 01234568899
Q ss_pred EEEECCCCcEEEEe-------ccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEE
Q 003907 352 VVKDFVTRAIISQF-------KAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYK 424 (787)
Q Consensus 352 ~IwDl~s~~~v~~~-------~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~ 424 (787)
++||+.++..+..+ .+|..+|.+|+|+|+|++||+++.|| .|++||+....... .............
T Consensus 230 ~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~-~i~iwd~~~~~~~~-----~~~~~~~~~~~~~ 303 (388)
T d1erja_ 230 RVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR-SVKLWNLQNANNKS-----DSKTPNSGTCEVT 303 (388)
T ss_dssp EEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS-EEEEEEC--------------------CEEEE
T ss_pred EEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCC-cEEEEeccCCcccc-----ccccccccceeee
Confidence 99999988766655 46899999999999999999999966 59999985421000 0000000112222
Q ss_pred EecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCCCCcccccccc
Q 003907 425 LHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPFGGDSGFQTLS 473 (787)
Q Consensus 425 l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~gg~~~~~~H~ 473 (787)
.. .+...|.+++|+|||++|++++.||+|+|||+........+.+|.
T Consensus 304 ~~--~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~ 350 (388)
T d1erja_ 304 YI--GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR 350 (388)
T ss_dssp EE--CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred cc--cccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCC
Confidence 22 234569999999999999999999999999998765555666664
No 6
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.87 E-value=1e-19 Score=186.29 Aligned_cols=254 Identities=13% Similarity=0.105 Sum_probs=173.7
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccC
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLH 130 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~sr 130 (787)
..+|++.|..+.|.. +++.|++|..+| ++|||+. .++....+..|.++|.++++.|+.
T Consensus 51 L~GH~~~I~~l~~s~-------~~~~l~sgs~Dg~v~iWd~~-~~~~~~~~~~~~~~v~~v~~~~~~------------- 109 (340)
T d1tbga_ 51 LRGHLAKIYAMHWGT-------DSRLLVSASQDGKLIIWDSY-TTNKVHAIPLRSSWVMTCAYAPSG------------- 109 (340)
T ss_dssp ECCCSSCEEEEEECT-------TSSEEEEEETTTEEEEEETT-TTEEEEEEECSCSCEEEEEECTTS-------------
T ss_pred ECCCCCCEEEEEECC-------CCCEEEEEECCCceeeeecc-cceeEEEEecccccEEeeEeeccc-------------
Confidence 568999999999974 367899998887 9999996 466777788899999999998742
Q ss_pred cEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCC----eEEEEEeCCCcE-EEEEec-CCe
Q 003907 131 PFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSH----CYEHVLRFRSSV-CMVRCS-PRI 204 (787)
Q Consensus 131 pLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg----~~v~tL~f~s~V-~sV~~s-~~~ 204 (787)
.+|++.+. ++++++|+.... .....+..+..+ ...... ...
T Consensus 110 ~~l~~~~~---------------------------------d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (340)
T d1tbga_ 110 NYVACGGL---------------------------------DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ 156 (340)
T ss_dssp SEEEEEET---------------------------------TCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTE
T ss_pred eeeeeecc---------------------------------cceeecccccccccccccceecccccccccccccccccc
Confidence 26654321 257899987653 344555544432 222222 233
Q ss_pred EEE-EeCCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEccceEEEecCCceecCcceeccccCCCCCcC
Q 003907 205 VAV-GLATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVS 283 (787)
Q Consensus 205 LaV-~~~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~s 283 (787)
+.. ..+.....++..+.........+..+ ..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-------~~~~--------------------- 195 (340)
T d1tbga_ 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGD-------------VMSLS-------LAPD--------------------- 195 (340)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECCSSC-------------EEEEE-------ECTT---------------------
T ss_pred ccccccccccccccccccccccccccccee-------------Eeeec-------cccc---------------------
Confidence 333 33445666665544332222211110 00000 0000
Q ss_pred CCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEE
Q 003907 284 PSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIIS 363 (787)
Q Consensus 284 ~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~ 363 (787)
+ ...+.+..+|.|++||+.+++.+.
T Consensus 196 -------~------------------------------------------------~~~~~~~~d~~v~i~d~~~~~~~~ 220 (340)
T d1tbga_ 196 -------T------------------------------------------------RLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp -------S------------------------------------------------SEEEEEETTTEEEEEETTTTEEEE
T ss_pred -------c------------------------------------------------ceeEEeecCceEEEEECCCCcEEE
Confidence 0 011234578999999999999999
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCC
Q 003907 364 QFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYS 443 (787)
Q Consensus 364 ~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg 443 (787)
.+.+|..+|.+|+|+|+|++||+++.||. |++||+... ..+..+....+...|.+++|+||+
T Consensus 221 ~~~~h~~~i~~v~~~p~~~~l~s~s~d~~-i~~~~~~~~-----------------~~~~~~~~~~~~~~i~~~~~s~~~ 282 (340)
T d1tbga_ 221 TFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRAD-----------------QELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTT-----------------EEEEEECCTTCCSCEEEEEECSSS
T ss_pred EEeCCCCCeEEEEECCCCCEEEEEeCCCe-EEEEeeccc-----------------ccccccccccccCceEEEEECCCC
Confidence 99999999999999999999999999776 999998541 344444433344569999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCCCcccccccc
Q 003907 444 QWIAIVSSKGTCHVFVLSPFGGDSGFQTLS 473 (787)
Q Consensus 444 ~~LAs~S~dgTVhIwdl~~~gg~~~~~~H~ 473 (787)
++|++++.||+|+|||+........+.+|.
T Consensus 283 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~ 312 (340)
T d1tbga_ 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHD 312 (340)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred CEEEEEECCCEEEEEECCCCcEEEEEcCCC
Confidence 999999999999999998765555666674
No 7
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.1e-19 Score=184.89 Aligned_cols=309 Identities=16% Similarity=0.125 Sum_probs=194.3
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccC
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLH 130 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~sr 130 (787)
..+|++.|.. .|+- +++.|++|..+| ++|||+. .+++...+..|.++|.++.+.|+
T Consensus 12 l~GH~~~V~s-~~~~-------~g~~l~sgs~Dg~i~vWd~~-~~~~~~~~~~h~~~V~~v~~~~~-------------- 68 (342)
T d2ovrb2 12 LKGHDDHVIT-CLQF-------CGNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWSSQMRDN-------------- 68 (342)
T ss_dssp EECSTTSCEE-EEEE-------ETTEEEEEETTSCEEEEETT-TCCEEEECCCCSSCEEEEEEETT--------------
T ss_pred ECCcCCceEE-EEEE-------CCCEEEEEeCCCeEEEEECC-CCCEEEEEeCCCCCEEEEEeCCC--------------
Confidence 3578988854 3432 145788888776 9999995 57788888999999999998753
Q ss_pred cEEEEEEcCCCCCCCC---CCC----cCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCC-CcEEEEEecC
Q 003907 131 PFLLVVAGEDTNTLAP---GQN----RSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFR-SSVCMVRCSP 202 (787)
Q Consensus 131 pLLavV~~d~~~~~~~---~~~----~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~-s~V~sV~~s~ 202 (787)
+|+..+.|+....-. ... ......+...............+.+|.+|+..+++....+... ..........
T Consensus 69 -~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (342)
T d2ovrb2 69 -IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 147 (342)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECS
T ss_pred -ccccceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeecccc
Confidence 554433332110000 000 0000000000000000000124578999999999998888654 4665666666
Q ss_pred C-eEEEEeCCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEccceEEEecCCceecCcceeccccCCCCC
Q 003907 203 R-IVAVGLATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSG 281 (787)
Q Consensus 203 ~-~LaV~~~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~ 281 (787)
. .++.+.+..|++||....+.+.++..+... ...+...+.+|+.++.+..+ ..|+....
T Consensus 148 ~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~s~~~dg~i-----~~~d~~~~-- 207 (342)
T d2ovrb2 148 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-------------VYSLQFDGIHVVSGSLDTSI-----RVWDVETG-- 207 (342)
T ss_dssp SCEEEEETTSCEEEEEGGGTEEEEEECCCSSC-------------EEEEEECSSEEEEEETTSCE-----EEEETTTC--
T ss_pred ceeeeecCCCeEEEeecccceeeEEEcCcccc-------------cccccCCCCEEEEEeCCCeE-----EEeecccc--
Confidence 5 445577999999999999999998887765 23456677888888765211 11221111
Q ss_pred cCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcE
Q 003907 282 VSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAI 361 (787)
Q Consensus 282 ~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~ 361 (787)
..+ +++..+. .......++ ...++.+..||.|+|||+...+.
T Consensus 208 ----------~~~----------------~~~~~~~------~~v~~~~~~------~~~l~s~s~d~~i~iwd~~~~~~ 249 (342)
T d2ovrb2 208 ----------NCI----------------HTLTGHQ------SLTSGMELK------DNILVSGNADSTVKIWDIKTGQC 249 (342)
T ss_dssp ----------CEE----------------EEECCCC------SCEEEEEEE------TTEEEEEETTSCEEEEETTTCCE
T ss_pred ----------eee----------------eEecccc------cceeEEecC------CCEEEEEcCCCEEEEEecccccc
Confidence 000 0000000 000011111 11245677899999999999988
Q ss_pred EEEecc---CCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEec---ccccccEE
Q 003907 362 ISQFKA---HTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHR---GITSATIQ 435 (787)
Q Consensus 362 v~~~~a---H~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~r---G~~~a~I~ 435 (787)
...+.+ |...+.+++|+ +++|++|+.|| .|+|||+.. | ..++++.. +.+...|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg-~i~iwd~~t-------g----------~~i~~~~~~~~~~~~~~v~ 309 (342)
T d2ovrb2 250 LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDG-TVKLWDLKT-------G----------EFIRNLVTLESGGSGGVVW 309 (342)
T ss_dssp EEEECSTTSCSSCEEEEEEC--SSEEEEEETTS-EEEEEETTT-------C----------CEEEEEEECTTGGGTCEEE
T ss_pred cccccccceeeeceeecccC--CCeeEEEcCCC-EEEEEECCC-------C----------CEEEEEecccCCCCCCCEE
Confidence 887765 56677777775 57999999976 599999964 3 45666543 23445799
Q ss_pred EEEEccCCCEEEEEeCCCe----EEEEeCCC
Q 003907 436 DICFSHYSQWIAIVSSKGT----CHVFVLSP 462 (787)
Q Consensus 436 slaFSpDg~~LAs~S~dgT----VhIwdl~~ 462 (787)
+++|+||+++||+|+.||| +++||++.
T Consensus 310 ~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 310 RIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp EEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 9999999999999999997 99999874
No 8
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.86 E-value=2.3e-19 Score=189.20 Aligned_cols=245 Identities=11% Similarity=0.108 Sum_probs=169.9
Q ss_pred CCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccCcEE
Q 003907 55 LKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHPFL 133 (787)
Q Consensus 55 ~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srpLL 133 (787)
+...|.-+.|.. +++.|++|..+| +++||... ++....+..|.++|..+.+.++. ..+
T Consensus 120 ~~~~V~~l~~s~-------~~~~l~s~~~dg~v~i~~~~~-~~~~~~~~~h~~~v~~~~~~~~~-------------~~~ 178 (388)
T d1erja_ 120 SDLYIRSVCFSP-------DGKFLATGAEDRLIRIWDIEN-RKIVMILQGHEQDIYSLDYFPSG-------------DKL 178 (388)
T ss_dssp CCCBEEEEEECT-------TSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTS-------------SEE
T ss_pred CCCCEEEEEECC-------CCCcceecccccccccccccc-ccccccccccccccccccccccc-------------ccc
Confidence 445567677753 467888888887 89999954 56666777888999999988532 244
Q ss_pred EEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCCcEEEEEecC---CeEEEEe-
Q 003907 134 LVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRSSVCMVRCSP---RIVAVGL- 209 (787)
Q Consensus 134 avV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s~V~sV~~s~---~~LaV~~- 209 (787)
++.+ + .+.|++||.++...+...........+.+.+ ++|+++.
T Consensus 179 ~~~~-~--------------------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 225 (388)
T d1erja_ 179 VSGS-G--------------------------------DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 225 (388)
T ss_dssp EEEE-T--------------------------------TSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred cccc-c--------------------------------ceeeeeeeccccccccccccccccccccccCCCCCeEEEEcC
Confidence 4322 1 2589999999999999888888777777755 6777765
Q ss_pred CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEccceEEEecCCceecCcceeccccCCCCCcCCCcCCC
Q 003907 210 ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPG 289 (787)
Q Consensus 210 ~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~ 289 (787)
++.|++||..+++...++......... + ......++++| +.
T Consensus 226 d~~i~i~~~~~~~~~~~~~~~~~~~~~-h-----~~~v~~l~~s~-------~~-------------------------- 266 (388)
T d1erja_ 226 DRAVRVWDSETGFLVERLDSENESGTG-H-----KDSVYSVVFTR-------DG-------------------------- 266 (388)
T ss_dssp TSCEEEEETTTCCEEEEEC------CC-C-----SSCEEEEEECT-------TS--------------------------
T ss_pred CCeEEEeecccCccceeeccccccccC-C-----CCCEEEEEECC-------CC--------------------------
Confidence 567999999999877776532110000 0 00011122221 00
Q ss_pred CCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCC----------
Q 003907 290 GSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTR---------- 359 (787)
Q Consensus 290 ~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~---------- 359 (787)
. .++.+..||.|++||+.++
T Consensus 267 -~-------------------------------------------------~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 296 (388)
T d1erja_ 267 -Q-------------------------------------------------SVVSGSLDRSVKLWNLQNANNKSDSKTPN 296 (388)
T ss_dssp -S-------------------------------------------------EEEEEETTSEEEEEEC-------------
T ss_pred -C-------------------------------------------------EEEEEECCCcEEEEeccCCcccccccccc
Confidence 0 1123456788888887653
Q ss_pred --cEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEE
Q 003907 360 --AIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDI 437 (787)
Q Consensus 360 --~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~sl 437 (787)
........|...|.+++|+|+|++|++|+.||+ |+|||+.. + .++.++. | +...|.++
T Consensus 297 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~-i~vwd~~~-------~----------~~~~~l~-~-H~~~V~~~ 356 (388)
T d1erja_ 297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKS-------G----------NPLLMLQ-G-HRNSVISV 356 (388)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTT-------C----------CEEEEEE-C-CSSCEEEE
T ss_pred ccceeeecccccceEEEEEECCCCCEEEEEeCCCE-EEEEECCC-------C----------cEEEEEe-C-CCCCEEEE
Confidence 244556789999999999999999999999775 99999864 3 4677775 4 34568888
Q ss_pred E------EccCCCEEEEEeCCCeEEEEeCCC
Q 003907 438 C------FSHYSQWIAIVSSKGTCHVFVLSP 462 (787)
Q Consensus 438 a------FSpDg~~LAs~S~dgTVhIwdl~~ 462 (787)
+ |+||+++||+++.||+|+||++++
T Consensus 357 ~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 357 AVANGSSLGPEYNVFATGSGDCKARIWKYKK 387 (388)
T ss_dssp EECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEecCcccCCCCCEEEEEeCCCEEEEEeeee
Confidence 7 567999999999999999999853
No 9
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.86 E-value=8.8e-20 Score=194.86 Aligned_cols=261 Identities=11% Similarity=0.129 Sum_probs=171.3
Q ss_pred CCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCc--eeEeeeeccCcEEEEEEecCCCCCCCCCCccccCcE
Q 003907 56 KDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASN--FNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHPF 132 (787)
Q Consensus 56 ~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~--~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srpL 132 (787)
.|.|+.+.|+. +++.|++|..+| ++|||++. ++ ....+..|+++|.+|++.|+. .+
T Consensus 7 ~~pIt~~~~s~-------dg~~la~~~~~~~i~iw~~~~-~~~~~~~~l~gH~~~V~~l~fsp~~-------------~~ 65 (371)
T d1k8kc_ 7 VEPISCHAWNK-------DRTQIAICPNNHEVHIYEKSG-NKWVQVHELKEHNGQVTGVDWAPDS-------------NR 65 (371)
T ss_dssp SSCCCEEEECT-------TSSEEEEECSSSEEEEEEEET-TEEEEEEEEECCSSCEEEEEEETTT-------------TE
T ss_pred CCCeEEEEECC-------CCCEEEEEeCCCEEEEEECCC-CCEEEEEEecCCCCCEEEEEECCCC-------------CE
Confidence 46689999974 477899998887 89999964 43 445678899999999999752 26
Q ss_pred EEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeC---CCcEEEEEecC--CeEEE
Q 003907 133 LLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRF---RSSVCMVRCSP--RIVAV 207 (787)
Q Consensus 133 LavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f---~s~V~sV~~s~--~~LaV 207 (787)
|++++. +++|+|||+++++....+.+ ...|.++++++ +.|++
T Consensus 66 l~s~s~---------------------------------D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~ 112 (371)
T d1k8kc_ 66 IVTCGT---------------------------------DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAV 112 (371)
T ss_dssp EEEEET---------------------------------TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEC---------------------------------CCeEEEEeeccccccccccccccccccccccccccccccee
Confidence 665331 25899999999887777654 35799999987 67777
Q ss_pred Ee-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCC
Q 003907 208 GL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSP 284 (787)
Q Consensus 208 ~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~ 284 (787)
+. ++.|++|+.........+.....+. ......++++| ++||.++.+..+ ..|+......
T Consensus 113 ~s~d~~i~i~~~~~~~~~~~~~~~~~~~---------~~~v~~v~~~p~~~~l~s~s~D~~v-----~v~~~~~~~~--- 175 (371)
T d1k8kc_ 113 GSGSRVISICYFEQENDWWVCKHIKKPI---------RSTVLSLDWHPNSVLLAAGSCDFKC-----RIFSAYIKEV--- 175 (371)
T ss_dssp EETTSSEEEEEEETTTTEEEEEEECTTC---------CSCEEEEEECTTSSEEEEEETTSCE-----EEEECCCTTT---
T ss_pred ecccCcceeeeeeccccccccccccccc---------ccccccccccccccceeccccCcEE-----EEEeeccCcc---
Confidence 65 4579999887766554443321110 00123466666 566665543110 0111110000
Q ss_pred CcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEE
Q 003907 285 STSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQ 364 (787)
Q Consensus 285 s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~ 364 (787)
.. .+. . ..+ ..+...++.+..
T Consensus 176 -----------------------------~~-----~~~--~------~~~-----------------~~~~~~~~~~~~ 196 (371)
T d1k8kc_ 176 -----------------------------EE-----RPA--P------TPW-----------------GSKMPFGELMFE 196 (371)
T ss_dssp -----------------------------SC-----CCC--C------BTT-----------------BSCCCTTCEEEE
T ss_pred -----------------------------cc-----ccc--c------ccc-----------------cccccceeeeee
Confidence 00 000 0 000 000122456777
Q ss_pred eccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCC
Q 003907 365 FKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQ 444 (787)
Q Consensus 365 ~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~ 444 (787)
+.+|...|.+++|+|+|++||+++.|| .|++||+.. + ..+..+.. +...|.+++|+||++
T Consensus 197 ~~~~~~~v~~~~~s~~g~~l~s~~~d~-~i~iwd~~~-------~----------~~~~~~~~--~~~~v~s~~fs~d~~ 256 (371)
T d1k8kc_ 197 SSSSCGWVHGVCFSANGSRVAWVSHDS-TVCLADADK-------K----------MAVATLAS--ETLPLLAVTFITESS 256 (371)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTT-EEEEEEGGG-------T----------TEEEEEEC--SSCCEEEEEEEETTE
T ss_pred ccCccCcEEEEEeecccccccccccCC-cceEEeeec-------c----------cceeeeec--ccccceeeeecCCCC
Confidence 889999999999999999999999966 599999854 2 46666653 345799999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCCCcc
Q 003907 445 WIAIVSSKGTCHVFVLSPFGGDS 467 (787)
Q Consensus 445 ~LAs~S~dgTVhIwdl~~~gg~~ 467 (787)
+||+|+ |+.+++|..+...+..
T Consensus 257 ~la~g~-d~~~~~~~~~~~~~~~ 278 (371)
T d1k8kc_ 257 LVAAGH-DCFPVLFTYDSAAGKL 278 (371)
T ss_dssp EEEEET-TSSCEEEEEETTTTEE
T ss_pred EEEEEc-CCceEEEEeeCCCceE
Confidence 888765 6777888776544443
No 10
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.86 E-value=8.2e-20 Score=186.65 Aligned_cols=243 Identities=11% Similarity=0.053 Sum_probs=167.2
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEee-eeccCcEEEEEEecCCCCCCCCCCcccc
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELV-SKRDGPVSFLQMQPFPVKDDGCEGFRKL 129 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ell-s~~dg~V~~v~~lP~P~~~~~~d~F~~s 129 (787)
..+|++.|..+.|.. +++.|++|..+| ++|||++. ++....+ ..|.++|.++++.|+.
T Consensus 8 ~~GH~~~V~~l~~s~-------dg~~l~s~s~Dg~v~vWd~~~-~~~~~~~~~~h~~~v~~v~~~~~g------------ 67 (299)
T d1nr0a2 8 RYGHNKAITALSSSA-------DGKTLFSADAEGHINSWDIST-GISNRVFPDVHATMITGIKTTSKG------------ 67 (299)
T ss_dssp ECCCSSCEEEEEECT-------TSSEEEEEETTSCEEEEETTT-CCEEECSSCSCSSCEEEEEECTTS------------
T ss_pred cCCCCCCcEEEEECC-------CCCEEEEEcCCCeEEEEECCC-CcEEEEEcCCCCCcEEEEEeeccc------------
Confidence 578999999999973 367888888877 99999965 5555555 4678999999998641
Q ss_pred CcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeE----EEEEeCCCcEEEEEecC--C
Q 003907 130 HPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCY----EHVLRFRSSVCMVRCSP--R 203 (787)
Q Consensus 130 rpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~----v~tL~f~s~V~sV~~s~--~ 203 (787)
.++ +++. +++|++|++...+. .........+..+.+++ +
T Consensus 68 -~~~-~~~~---------------------------------d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 112 (299)
T d1nr0a2 68 -DLF-TVSW---------------------------------DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD 112 (299)
T ss_dssp -CEE-EEET---------------------------------TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSS
T ss_pred -eee-cccc---------------------------------eeeEEEeccCCccccccccccccccccccccccccccc
Confidence 244 3332 25899999765321 12234556788888876 6
Q ss_pred eEEEEeCCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEccceEEEecCCceecCcceeccccCCCCCcC
Q 003907 204 IVAVGLATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVS 283 (787)
Q Consensus 204 ~LaV~~~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~s 283 (787)
+++++.++.+.+|+... ...+..... ...++++| +.
T Consensus 113 ~~~~~~~~~i~~~~~~~---~~~~~~~~~--------------~~~~~~s~-------~~-------------------- 148 (299)
T d1nr0a2 113 IAVAACYKHIAIYSHGK---LTEVPISYN--------------SSCVALSN-------DK-------------------- 148 (299)
T ss_dssp CEEEEESSEEEEEETTE---EEEEECSSC--------------EEEEEECT-------TS--------------------
T ss_pred ccccccccccccccccc---ccccccccc--------------cccccccc-------cc--------------------
Confidence 78888888999998432 122211100 11222221 10
Q ss_pred CCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEE
Q 003907 284 PSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIIS 363 (787)
Q Consensus 284 ~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~ 363 (787)
. .++.+..+|.|++||+.+++...
T Consensus 149 --------~------------------------------------------------~l~~g~~dg~i~~~d~~~~~~~~ 172 (299)
T d1nr0a2 149 --------Q------------------------------------------------FVAVGGQDSKVHVYKLSGASVSE 172 (299)
T ss_dssp --------C------------------------------------------------EEEEEETTSEEEEEEEETTEEEE
T ss_pred --------c------------------------------------------------ccccccccccccccccccccccc
Confidence 0 01123468899999998877544
Q ss_pred -EeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccC
Q 003907 364 -QFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHY 442 (787)
Q Consensus 364 -~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpD 442 (787)
....|..+|.+++|+|+|++|++++.+|. |++||+..... ......+ .+ +...|.+++|+||
T Consensus 173 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~~~~~~~~~~--------------~~~~~~~-~~-h~~~v~~l~~s~~ 235 (299)
T d1nr0a2 173 VKTIVHPAEITSVAFSNNGAFLVATDQSRK-VIPYSVANNFE--------------LAHTNSW-TF-HTAKVACVSWSPD 235 (299)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEEGGGTTE--------------ESCCCCC-CC-CSSCEEEEEECTT
T ss_pred cccccccccccccccccccccccccccccc-ccccccccccc--------------ccccccc-cc-ccccccccccccc
Confidence 34579999999999999999999999776 99999854100 0011111 12 3457999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCc
Q 003907 443 SQWIAIVSSKGTCHVFVLSPFGGD 466 (787)
Q Consensus 443 g~~LAs~S~dgTVhIwdl~~~gg~ 466 (787)
+++|++++.||+|+|||++.....
T Consensus 236 ~~~l~sgs~dg~i~iwd~~~~~~~ 259 (299)
T d1nr0a2 236 NVRLATGSLDNSVIVWNMNKPSDH 259 (299)
T ss_dssp SSEEEEEETTSCEEEEETTCTTSC
T ss_pred ccceEEEcCCCEEEEEECCCCCcc
Confidence 999999999999999999875443
No 11
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.85 E-value=1.8e-19 Score=189.50 Aligned_cols=245 Identities=14% Similarity=0.054 Sum_probs=167.6
Q ss_pred CCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeE-------eeeeccCcEEEEEEecCCCCCCCCCCcc
Q 003907 56 KDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNE-------LVSKRDGPVSFLQMQPFPVKDDGCEGFR 127 (787)
Q Consensus 56 ~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~e-------lls~~dg~V~~v~~lP~P~~~~~~d~F~ 127 (787)
...|..+.|. +..++++|++|..+| ++|||+........ .+..+.++|..+.+.|+.
T Consensus 63 ~~~v~~v~fs-----P~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~---------- 127 (325)
T d1pgua1 63 SSVVTTVKFS-----PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG---------- 127 (325)
T ss_dssp TSCEEEEEEC-----SSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS----------
T ss_pred CCCEEEEEEe-----eCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCC----------
Confidence 4679999996 233467899998877 99999965332211 233467899999998642
Q ss_pred ccCcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCC-CcEEEEEecC---C
Q 003907 128 KLHPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFR-SSVCMVRCSP---R 203 (787)
Q Consensus 128 ~srpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~-s~V~sV~~s~---~ 203 (787)
. +|++++.+. .+.+++|+..+++++.+++.+ ..|.++.+++ .
T Consensus 128 -~--~l~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 173 (325)
T d1pgua1 128 -R--RLCVVGEGR-------------------------------DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM 173 (325)
T ss_dssp -S--EEEEEECCS-------------------------------SCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSC
T ss_pred -C--ccceeeccc-------------------------------cceEEEEeecccccceeeeecccccccccccccccc
Confidence 2 565544321 257899999999999999855 5899999987 2
Q ss_pred eEEEE-eCCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEccceEEEecCCceecCcceeccccCCCCCc
Q 003907 204 IVAVG-LATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGV 282 (787)
Q Consensus 204 ~LaV~-~~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~ 282 (787)
+++++ .++.|++||..+++...++.++..-. + ....++++| +
T Consensus 174 ~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~----~------~v~~v~~~p-------d-------------------- 216 (325)
T d1pgua1 174 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQG----S------FVRDVEFSP-------D-------------------- 216 (325)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECSSSCTT----C------CEEEEEECS-------T--------------------
T ss_pred eEEEeecccccccccccccccceecccccCCC----C------ccEEeeecc-------c--------------------
Confidence 45544 46789999999887766665432100 0 011222221 1
Q ss_pred CCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEE
Q 003907 283 SPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAII 362 (787)
Q Consensus 283 s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v 362 (787)
++.+ ++.+..||.|++||+.+++.+
T Consensus 217 -------~~~~------------------------------------------------l~s~~~d~~i~iwd~~~~~~~ 241 (325)
T d1pgua1 217 -------SGEF------------------------------------------------VITVGSDRKISCFDGKSGEFL 241 (325)
T ss_dssp -------TCCE------------------------------------------------EEEEETTCCEEEEETTTCCEE
T ss_pred -------ccee------------------------------------------------ccccccccceeeeeecccccc
Confidence 0111 123456899999999999999
Q ss_pred EEeccCCCCeEEEEEC---CCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEE--EE
Q 003907 363 SQFKAHTSPISALCFD---PSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQ--DI 437 (787)
Q Consensus 363 ~~~~aH~~pIsaLaFS---pdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~--sl 437 (787)
..|.+|..++..+.|+ |+|++|+|++.|+ .|+|||+.. + ..+..+..+.+...+. ++
T Consensus 242 ~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~-~i~iwd~~~-------~----------~~~~~~~~~~~~~~~~~~~~ 303 (325)
T d1pgua1 242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADA-TIRVWDVTT-------S----------KCVQKWTLDKQQLGNQQVGV 303 (325)
T ss_dssp EECCBTTBCCCSCEEEEEESSSSEEEEEETTS-EEEEEETTT-------T----------EEEEEEECCTTCGGGCEEEE
T ss_pred ccccccccccccceeeeeccCCCEEEEEeCCC-eEEEEECCC-------C----------CEEEEEEecCCcccCeEEEE
Confidence 9999999988777776 7899999999966 599999964 2 4555554332222333 44
Q ss_pred EEccCCCEEEEEeCCCeEEEEeC
Q 003907 438 CFSHYSQWIAIVSSKGTCHVFVL 460 (787)
Q Consensus 438 aFSpDg~~LAs~S~dgTVhIwdl 460 (787)
.|.++ .+|+++|.||+|+||||
T Consensus 304 ~~~~~-~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 304 VATGN-GRIISLSLDGTLNFYEL 325 (325)
T ss_dssp EEEET-TEEEEEETTSCEEEEET
T ss_pred EECCC-CEEEEEECCCEEEEEEC
Confidence 44444 47899999999999996
No 12
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4e-18 Score=169.28 Aligned_cols=277 Identities=13% Similarity=0.140 Sum_probs=175.0
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccC
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLH 130 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~sr 130 (787)
..++...|..+.|| ++.|++|..+| ++|||++ .+++...+..|.++|.+|.+. ++
T Consensus 11 ~~~~~~~V~c~~~d---------~~~l~sgs~Dg~i~vWd~~-~~~~~~~l~~H~~~V~~v~~~-------------~~- 66 (293)
T d1p22a2 11 RSETSKGVYCLQYD---------DQKIVSGLRDNTIKIWDKN-TLECKRILTGHTGSVLCLQYD-------------ER- 66 (293)
T ss_dssp CCSSCCCEEEEECC---------SSEEEEEESSSCEEEEESS-SCCEEEEECCCSSCEEEEECC-------------SS-
T ss_pred cCCCCCCEEEEEEc---------CCEEEEEeCCCeEEEEECC-CCcEEEEEecCCCCEeeeecc-------------cc-
Confidence 45677788877775 45788888877 9999995 477888889999999988743 22
Q ss_pred cEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCC-cEEEEEecCCeEEEE-
Q 003907 131 PFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRS-SVCMVRCSPRIVAVG- 208 (787)
Q Consensus 131 pLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s-~V~sV~~s~~~LaV~- 208 (787)
+|++.+. +++|++|+++++.......... ...........++++
T Consensus 67 -~l~s~s~---------------------------------D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (293)
T d1p22a2 67 -VIITGSS---------------------------------DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCS 112 (293)
T ss_dssp -EEEEEET---------------------------------TSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEE
T ss_pred -eeecccc---------------------------------cccccccccccccccccccccccccccccccccceeecc
Confidence 5654221 2589999999998888776654 444444455556554
Q ss_pred eCCeEEEEECCCCceeEEEE---ecCCcccCCCCccccccccceeEEccceEEEecCCceecCcceeccccCCCCCcCCC
Q 003907 209 LATQIYCFDALTLENKFSVL---TYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVSPS 285 (787)
Q Consensus 209 ~~~~I~iwD~~T~e~l~tl~---t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s 285 (787)
.+..+.+||..+........ .+... ...+.+.+..+..++.+..+ ..|+..+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------v~~~~~~~~~~~~~s~d~~i-----~~~d~~~~------ 168 (293)
T d1p22a2 113 KDRSIAVWDMASPTDITLRRVLVGHRAA-------------VNVVDFDDKYIVSASGDRTI-----KVWNTSTC------ 168 (293)
T ss_dssp TTSCEEEEECSSSSCCEEEEEECCCSSC-------------EEEEEEETTEEEEEETTSEE-----EEEETTTC------
T ss_pred cccceeEeeccccccccccccccccccc-------------cccceecccccccccCCCce-----eeecCCCC------
Confidence 45679999988766443332 34433 12344455455554443211 11221110
Q ss_pred cCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEe
Q 003907 286 TSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQF 365 (787)
Q Consensus 286 ~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~ 365 (787)
..+ +.+..... ......+ ....++.+..||.|+|||+.+.+.+..+
T Consensus 169 ------~~~----------------~~~~~~~~------~v~~~~~------~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 214 (293)
T d1p22a2 169 ------EFV----------------RTLNGHKR------GIACLQY------RDRLVVSGSSDNTIRLWDIECGACLRVL 214 (293)
T ss_dssp ------CEE----------------EEEECCSS------CEEEEEE------ETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred ------cEE----------------EEEccccc------ccccccC------CCCeEEEecCCCEEEEEecccceeeeee
Confidence 000 01100000 0000000 0112446678999999999999999999
Q ss_pred ccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCE
Q 003907 366 KAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQW 445 (787)
Q Consensus 366 ~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~ 445 (787)
.+|...|.+ +++++.+|++++.||. |+|||+....... .......+..+. + |...|++++| |+++
T Consensus 215 ~~~~~~v~~--~~~~~~~l~sg~~dg~-i~iwd~~~~~~~~--------~~~~~~~~~~~~-~-H~~~V~~v~~--d~~~ 279 (293)
T d1p22a2 215 EGHEELVRC--IRFDNKRIVSGAYDGK-IKVWDLVAALDPR--------APAGTLCLRTLV-E-HSGRVFRLQF--DEFQ 279 (293)
T ss_dssp CCCSSCEEE--EECCSSEEEEEETTSC-EEEEEHHHHTSTT--------SCTTTTEEEEEC-C-CSSCCCCEEE--CSSC
T ss_pred cccceeeee--ccccceEEEEEcCCCE-EEEEECCCCcccc--------ccCCceeeEEec-C-CCCCEEEEEE--cCCE
Confidence 999999876 4567899999999776 9999974310000 000113455553 4 3457999998 5678
Q ss_pred EEEEeCCCeEEEEe
Q 003907 446 IAIVSSKGTCHVFV 459 (787)
Q Consensus 446 LAs~S~dgTVhIwd 459 (787)
|+++|.||+|+|||
T Consensus 280 l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 280 IVSSSHDDTILIWD 293 (293)
T ss_dssp EEECCSSSEEEEEC
T ss_pred EEEEecCCEEEEeC
Confidence 99999999999997
No 13
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.81 E-value=1.9e-18 Score=185.85 Aligned_cols=117 Identities=16% Similarity=0.188 Sum_probs=94.4
Q ss_pred ccccCCCceEEEEECCCCcEEEEe------ccCCCCeEEEEECCCCCEEEEEEcCCC--EEEEEeCCCCcccCCCCCCcc
Q 003907 342 GADMDNAGIVVVKDFVTRAIISQF------KAHTSPISALCFDPSGTLLVTASVYGN--NINIFRIMPSCMRSGSGNHKY 413 (787)
Q Consensus 342 ~~s~~~dG~V~IwDl~s~~~v~~~------~aH~~pIsaLaFSpdG~lLATaS~dG~--~IrVWdi~~~~~~~~~g~~~~ 413 (787)
++++..||+|+|||+.+++.+..+ .+|..+|.+|+|+|||++||+||.|++ .|+|||+.. |
T Consensus 198 lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~-------g---- 266 (393)
T d1sq9a_ 198 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-------G---- 266 (393)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-------C----
T ss_pred EEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeeccccc-------c----
Confidence 346788999999999998877654 469999999999999999999999775 599999864 2
Q ss_pred ccCCcceEEEEEe------------cccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCCCCccccccccCCC
Q 003907 414 DWNSSHVHLYKLH------------RGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPFGGDSGFQTLSSQG 476 (787)
Q Consensus 414 ~~~~s~~~l~~l~------------rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~gg~~~~~~H~~~~ 476 (787)
.++..+. .| |...|++|+|+|||++|+++|.|++|+|||+.+......+.+|...+
T Consensus 267 ------~~~~~l~~~~~~~~~~~~~~g-H~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v 334 (393)
T d1sq9a_ 267 ------ERIGSLSVPTHSSQASLGEFA-HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 334 (393)
T ss_dssp ------CEEEEECBC--------CCBS-BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred ------eeeeeeccccccccceeeeec-ccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcc
Confidence 2333332 24 34569999999999999999999999999999876666788886443
No 14
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=3.8e-18 Score=171.04 Aligned_cols=255 Identities=16% Similarity=0.176 Sum_probs=176.0
Q ss_pred eeEeeeeccCcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEE
Q 003907 97 FNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVR 176 (787)
Q Consensus 97 ~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVr 176 (787)
.+..|.+|.++|.+|++.|+ .++||.++. +++|+
T Consensus 9 ~~~~L~GH~~~I~~l~~sp~-------------~~~l~s~s~---------------------------------Dg~i~ 42 (317)
T d1vyhc1 9 EKYALSGHRSPVTRVIFHPV-------------FSVMVSASE---------------------------------DATIK 42 (317)
T ss_dssp CSCEEECCSSCEEEEEECSS-------------SSEEEEEES---------------------------------SSCEE
T ss_pred ccEEEcCCCCCeEEEEEcCC-------------CCEEEEEeC---------------------------------CCeEE
Confidence 34568899999999999874 247765321 25899
Q ss_pred EEECCCCeEEEEEeCC-CcEEEEEecC--CeEEEEe-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEE
Q 003907 177 FYSFQSHCYEHVLRFR-SSVCMVRCSP--RIVAVGL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAV 252 (787)
Q Consensus 177 lWdlktg~~v~tL~f~-s~V~sV~~s~--~~LaV~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAl 252 (787)
|||+.+++.+.+++.+ ..|.++.+++ .+++.+. +..+.+|+....+....+..+... ...+.+
T Consensus 43 iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 109 (317)
T d1vyhc1 43 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN-------------VSSVSI 109 (317)
T ss_dssp EEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSC-------------EEEEEE
T ss_pred EEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccccccccccccccccc-------------ceeeec
Confidence 9999999999999865 6899999988 5666655 456899998887765554444332 234555
Q ss_pred cc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcc
Q 003907 253 GP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVS 330 (787)
Q Consensus 253 sp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s 330 (787)
.| +.|+.++.+..+ ..|+..++ ... +++..+. .......
T Consensus 110 ~~~~~~~~~~~~d~~~-----~~~~~~~~------------~~~----------------~~~~~~~------~~~~~~~ 150 (317)
T d1vyhc1 110 MPNGDHIVSASRDKTI-----KMWEVQTG------------YCV----------------KTFTGHR------EWVRMVR 150 (317)
T ss_dssp CSSSSEEEEEETTSEE-----EEEETTTC------------CEE----------------EEEECCS------SCEEEEE
T ss_pred cCCCceEEeeccCcce-----eEeecccc------------eee----------------eEEccCC------Ccceeee
Confidence 55 566666544211 11221111 000 1111100 0011112
Q ss_pred cCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCC--------------------CEEEEEEcC
Q 003907 331 PNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSG--------------------TLLVTASVY 390 (787)
Q Consensus 331 ~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG--------------------~lLATaS~d 390 (787)
++++. ..++.+..||.|++||+.+++.+..+.+|...|.+++|+|++ .++++++.|
T Consensus 151 ~~~~~----~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 226 (317)
T d1vyhc1 151 PNQDG----TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 226 (317)
T ss_dssp ECTTS----SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT
T ss_pred cccCC----CEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCC
Confidence 22222 234567789999999999999999999999999999998864 478999996
Q ss_pred CCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCCCCccccc
Q 003907 391 GNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPFGGDSGFQ 470 (787)
Q Consensus 391 G~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~gg~~~~~ 470 (787)
| .|++||+.. + ..+.++. + +...|.+++|+||+++|++++.||+|+|||+........+.
T Consensus 227 ~-~i~~~~~~~-------~----------~~~~~~~-~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 286 (317)
T d1vyhc1 227 K-TIKMWDVST-------G----------MCLMTLV-G-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286 (317)
T ss_dssp S-EEEEEETTT-------T----------EEEEEEE-C-CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred C-EEEEEECCC-------C----------cEEEEEe-C-CCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEc
Confidence 6 599999854 3 4666665 3 34579999999999999999999999999998766666667
Q ss_pred ccc
Q 003907 471 TLS 473 (787)
Q Consensus 471 ~H~ 473 (787)
.|.
T Consensus 287 ~h~ 289 (317)
T d1vyhc1 287 AHE 289 (317)
T ss_dssp CCS
T ss_pred CCC
Confidence 774
No 15
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.81 E-value=2.1e-17 Score=168.68 Aligned_cols=288 Identities=14% Similarity=0.086 Sum_probs=164.9
Q ss_pred CCCCCCcE-EEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCcccc
Q 003907 52 SEDLKDQV-TWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKL 129 (787)
Q Consensus 52 ~~~~~~~v-~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~s 129 (787)
..+|++.| ..+.|| ++.|++|..+| ++|||+. .+++...+..|.++|.+|++.|+ .
T Consensus 8 L~GH~~~vitc~~~~---------~~~l~tgs~Dg~i~vWd~~-~~~~~~~l~~H~~~V~~l~~s~~------------~ 65 (355)
T d1nexb2 8 LRGHMTSVITCLQFE---------DNYVITGADDKMIRVYDSI-NKKFLLQLSGHDGGVWALKYAHG------------G 65 (355)
T ss_dssp EECCSSSCEEEEEEE---------TTEEEEEETTTEEEEEETT-TTEEEEEEECCSSCEEEEEEETT------------T
T ss_pred ECCcCCCcEEEEEEC---------CCEEEEEeCCCeEEEEECC-CCcEEEEEECCCCCEEEEEEcCC------------C
Confidence 45788775 556665 35788888877 9999996 47777888999999999999853 1
Q ss_pred CcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCC---cEEEEEecC--Ce
Q 003907 130 HPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRS---SVCMVRCSP--RI 204 (787)
Q Consensus 130 rpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s---~V~sV~~s~--~~ 204 (787)
+|+..+. +++|++|++...+......... .+..+.+.+ +.
T Consensus 66 --~l~s~s~---------------------------------D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (355)
T d1nexb2 66 --ILVSGST---------------------------------DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKY 110 (355)
T ss_dssp --EEEEEET---------------------------------TCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEE
T ss_pred --EEEEEec---------------------------------ccccccccccccccccccccccccccccccccccccce
Confidence 5544221 3689999999999888776543 223333443 45
Q ss_pred EEEE-eCCeEEEEECCCCceeEEEEecC-CcccC--CCCcc-cc---cc-ccceeEEc--cceEEEecCCceecCcceec
Q 003907 205 VAVG-LATQIYCFDALTLENKFSVLTYP-VPQLA--GQGAV-GI---NV-GYGPMAVG--PRWLAYASNTLLLSNSGRLS 273 (787)
Q Consensus 205 LaV~-~~~~I~iwD~~T~e~l~tl~t~p-~p~~~--~~~~~-~~---~~-~~~~lAls--pr~LAyas~~~~l~~~g~~s 273 (787)
++++ .++.|++||+.+.+......... .+... ..... .. .. .....+.. .++++.+..+..+ ..
T Consensus 111 ~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i-----~~ 185 (355)
T d1nexb2 111 IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTL-----IV 185 (355)
T ss_dssp EEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCE-----EE
T ss_pred eeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeeccccee-----ee
Confidence 6655 45689999998876544332111 10000 00000 00 00 00001111 1344443322100 01
Q ss_pred cccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEE
Q 003907 274 PQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVV 353 (787)
Q Consensus 274 ~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~I 353 (787)
|+..+. ..+ +.+.... .......+++. ...+..+..||.|++
T Consensus 186 ~d~~~~------------~~~----------------~~~~~~~------~~~~~~~~~~~----~~~~~~~~~d~~i~i 227 (355)
T d1nexb2 186 WDVAQM------------KCL----------------YILSGHT------DRIYSTIYDHE----RKRCISASMDTTIRI 227 (355)
T ss_dssp EETTTT------------EEE----------------EEECCCS------SCEEEEEEETT----TTEEEEEETTSCEEE
T ss_pred eecccc------------cce----------------eeeeccc------ccccccccccc----ceeeecccccceEEe
Confidence 111000 000 0000000 00001111111 112345678999999
Q ss_pred EECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEeccccccc
Q 003907 354 KDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSAT 433 (787)
Q Consensus 354 wDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~ 433 (787)
||+.++..+..+.+|..+|.+++|++ ++|++++.|| .|++||+.. + .+....+. ...
T Consensus 228 ~d~~~~~~~~~~~~h~~~v~~~~~~~--~~l~~~~~dg-~i~iwd~~~-------~----------~~~~~~~~---~~~ 284 (355)
T d1nexb2 228 WDLENGELMYTLQGHTALVGLLRLSD--KFLVSAAADG-SIRGWDAND-------Y----------SRKFSYHH---TNL 284 (355)
T ss_dssp EETTTCCEEEEECCCSSCCCEEEECS--SEEEEECTTS-EEEEEETTT-------C----------CEEEEEEC---TTC
T ss_pred eecccccccccccccccccccccccc--ceeeeeeccc-ccccccccc-------c----------ceeccccc---CCc
Confidence 99999999999999999999999974 7999999977 499999854 2 23334332 222
Q ss_pred EEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q 003907 434 IQDICFSHYSQWIAIVSSKGTCHVFVLSPF 463 (787)
Q Consensus 434 I~slaFSpDg~~LAs~S~dgTVhIwdl~~~ 463 (787)
....+|++++++|++++ |++|+|||++..
T Consensus 285 ~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg 313 (355)
T d1nexb2 285 SAITTFYVSDNILVSGS-ENQFNIYNLRSG 313 (355)
T ss_dssp CCCCEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred eEEEEEcCCCCEEEEEe-CCEEEEEECCCC
Confidence 23346788888877765 889999999864
No 16
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.80 E-value=2.9e-17 Score=167.75 Aligned_cols=236 Identities=11% Similarity=0.084 Sum_probs=163.6
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCce---eEeeeeccCcEEEEEEecCCCCCCCCCCcc
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNF---NELVSKRDGPVSFLQMQPFPVKDDGCEGFR 127 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~---~ells~~dg~V~~v~~lP~P~~~~~~d~F~ 127 (787)
.+.|...|..+.|.. .++.|++|+.++ +++|+....... ...+..|.+........+.
T Consensus 93 ~~~~~~~v~~v~~~~-------~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 154 (340)
T d1tbga_ 93 IPLRSSWVMTCAYAP-------SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD----------- 154 (340)
T ss_dssp EECSCSCEEEEEECT-------TSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEET-----------
T ss_pred EecccccEEeeEeec-------cceeeeeecccceeecccccccccccccceecccccccccccccccc-----------
Confidence 345677788888863 356788777766 899998654322 2223334444444333211
Q ss_pred ccCcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeC-CCcEEEEEecC--Ce
Q 003907 128 KLHPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRF-RSSVCMVRCSP--RI 204 (787)
Q Consensus 128 ~srpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f-~s~V~sV~~s~--~~ 204 (787)
..+.... .......|+..+......... ...+..+.+.+ .+
T Consensus 155 ---~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (340)
T d1tbga_ 155 ---NQIVTSS---------------------------------GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198 (340)
T ss_dssp ---TEEEEEE---------------------------------TTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred ---ccccccc---------------------------------ccccccccccccccccccccccceeEeeeccccccce
Confidence 1232211 124778888887776665554 45777777765 56
Q ss_pred EEEEe-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCC
Q 003907 205 VAVGL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSG 281 (787)
Q Consensus 205 LaV~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~ 281 (787)
++++. +..|++||+.+++.+.++..|..+ ...++++| ++|
T Consensus 199 ~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~-------------i~~v~~~p~~~~l------------------------ 241 (340)
T d1tbga_ 199 FVSGACDASAKLWDVREGMCRQTFTGHESD-------------INAICFFPNGNAF------------------------ 241 (340)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEECCCSSC-------------EEEEEECTTSSEE------------------------
T ss_pred eEEeecCceEEEEECCCCcEEEEEeCCCCC-------------eEEEEECCCCCEE------------------------
Confidence 66654 568999999999988888765542 22344432 111
Q ss_pred cCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcE
Q 003907 282 VSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAI 361 (787)
Q Consensus 282 ~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~ 361 (787)
+.+..||.|++||+.....
T Consensus 242 -------------------------------------------------------------~s~s~d~~i~~~~~~~~~~ 260 (340)
T d1tbga_ 242 -------------------------------------------------------------ATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp -------------------------------------------------------------EEEETTSCEEEEETTTTEE
T ss_pred -------------------------------------------------------------EEEeCCCeEEEEeeccccc
Confidence 1234688999999999887
Q ss_pred EEEe--ccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEE
Q 003907 362 ISQF--KAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICF 439 (787)
Q Consensus 362 v~~~--~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaF 439 (787)
+..+ ..|..+|.+++|+|+|++|++++.||. |+|||+.. + ..+..+. | |...|.+|+|
T Consensus 261 ~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~-i~iwd~~~-------~----------~~~~~~~-~-H~~~V~~l~~ 320 (340)
T d1tbga_ 261 LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALK-------A----------DRAGVLA-G-HDNRVSCLGV 320 (340)
T ss_dssp EEEECCTTCCSCEEEEEECSSSCEEEEEETTSC-EEEEETTT-------C----------CEEEEEC-C-CSSCEEEEEE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCE-EEEEECCC-------C----------cEEEEEc-C-CCCCEEEEEE
Confidence 7765 467788999999999999999999776 99999854 2 4666664 4 3457999999
Q ss_pred ccCCCEEEEEeCCCeEEEEe
Q 003907 440 SHYSQWIAIVSSKGTCHVFV 459 (787)
Q Consensus 440 SpDg~~LAs~S~dgTVhIwd 459 (787)
+||+++|+++|.||+|+|||
T Consensus 321 s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 321 TDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTSSCEEEEETTSCEEEEC
T ss_pred eCCCCEEEEEccCCEEEEeC
Confidence 99999999999999999997
No 17
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.80 E-value=1e-17 Score=170.91 Aligned_cols=236 Identities=11% Similarity=0.120 Sum_probs=157.8
Q ss_pred CCCCCcEEEEEEeeccCCCCCCCeEEEEEecCcEEEEEccCCCc--eeEeeeeccCcEEEEEEecCCCCCCCCCCccccC
Q 003907 53 EDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNGFQVLDVEDASN--FNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLH 130 (787)
Q Consensus 53 ~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G~qVWdv~~~~~--~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~sr 130 (787)
+.|++.|..+.|.. +++++++|.++++++|+...... .......+...+..+.+.|+.
T Consensus 52 ~~h~~~v~~v~~~~-------~g~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g------------- 111 (299)
T d1nr0a2 52 DVHATMITGIKTTS-------KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADG------------- 111 (299)
T ss_dssp CSCSSCEEEEEECT-------TSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTS-------------
T ss_pred CCCCCcEEEEEeec-------cceeecccceeeEEEeccCCcccccccccccccccccccccccccc-------------
Confidence 45788899999863 35788889888999999854321 223344566778888887631
Q ss_pred cEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEE
Q 003907 131 PFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVG 208 (787)
Q Consensus 131 pLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~ 208 (787)
.+++. .. .+.+++|+... ...+.....+..+++++ ++|+++
T Consensus 112 ~~~~~-~~---------------------------------~~~i~~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g 154 (299)
T d1nr0a2 112 DIAVA-AC---------------------------------YKHIAIYSHGK---LTEVPISYNSSCVALSNDKQFVAVG 154 (299)
T ss_dssp SCEEE-EE---------------------------------SSEEEEEETTE---EEEEECSSCEEEEEECTTSCEEEEE
T ss_pred ccccc-cc---------------------------------ccccccccccc---ccccccccccccccccccccccccc
Confidence 14432 22 14799999543 33445566777888877 678876
Q ss_pred e-CCeEEEEECCCCceeEEEE-ecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCC
Q 003907 209 L-ATQIYCFDALTLENKFSVL-TYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSP 284 (787)
Q Consensus 209 ~-~~~I~iwD~~T~e~l~tl~-t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~ 284 (787)
. ++.|++||+.+.+...... .|+.+ ...++++| ++|
T Consensus 155 ~~dg~i~~~d~~~~~~~~~~~~~~~~~-------------i~~~~~~~~~~~l--------------------------- 194 (299)
T d1nr0a2 155 GQDSKVHVYKLSGASVSEVKTIVHPAE-------------ITSVAFSNNGAFL--------------------------- 194 (299)
T ss_dssp ETTSEEEEEEEETTEEEEEEEEECSSC-------------EEEEEECTTSSEE---------------------------
T ss_pred ccccccccccccccccccccccccccc-------------ccccccccccccc---------------------------
Confidence 5 5679999998776433222 23321 12233322 111
Q ss_pred CcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEE-
Q 003907 285 STSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIIS- 363 (787)
Q Consensus 285 s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~- 363 (787)
+.+..+|.|++||+.++..+.
T Consensus 195 ----------------------------------------------------------~~~~~d~~i~~~~~~~~~~~~~ 216 (299)
T d1nr0a2 195 ----------------------------------------------------------VATDQSRKVIPYSVANNFELAH 216 (299)
T ss_dssp ----------------------------------------------------------EEEETTSCEEEEEGGGTTEESC
T ss_pred ----------------------------------------------------------cccccccccccccccccccccc
Confidence 123457889999998776543
Q ss_pred --EeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEcc
Q 003907 364 --QFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSH 441 (787)
Q Consensus 364 --~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSp 441 (787)
.+.+|..+|.+++|+|+|++||+++.||. |+|||+.... . ..+ ....+++...|.+++ ++
T Consensus 217 ~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~-i~iwd~~~~~-----~----------~~~-~~~~~~~~~~v~~~~-~~ 278 (299)
T d1nr0a2 217 TNSWTFHTAKVACVSWSPDNVRLATGSLDNS-VIVWNMNKPS-----D----------HPI-IIKGAHAMSSVNSVI-WL 278 (299)
T ss_dssp CCCCCCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTCTT-----S----------CCE-EETTSSTTSCEEEEE-EE
T ss_pred cccccccccccccccccccccceEEEcCCCE-EEEEECCCCC-----c----------ceE-EEecCCCCCcEEEEE-EC
Confidence 45679999999999999999999999775 9999986410 0 122 222233334577665 46
Q ss_pred CCCEEEEEeCCCeEEEEeCC
Q 003907 442 YSQWIAIVSSKGTCHVFVLS 461 (787)
Q Consensus 442 Dg~~LAs~S~dgTVhIwdl~ 461 (787)
|+++|++++.|++|+||||.
T Consensus 279 ~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 279 NETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp ETTEEEEEETTSCEEEEECC
T ss_pred CCCEEEEEeCCCEEEEEecc
Confidence 67899999999999999984
No 18
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.78 E-value=2.4e-17 Score=175.75 Aligned_cols=200 Identities=14% Similarity=0.110 Sum_probs=132.7
Q ss_pred CEEEEEECCCCe--EEEEEeC-CCcEEEEEecC--CeEEEEe-CCeEEEEECCCCceeEEEEe--cCCcccCCCCccccc
Q 003907 173 TAVRFYSFQSHC--YEHVLRF-RSSVCMVRCSP--RIVAVGL-ATQIYCFDALTLENKFSVLT--YPVPQLAGQGAVGIN 244 (787)
Q Consensus 173 ~tVrlWdlktg~--~v~tL~f-~s~V~sV~~s~--~~LaV~~-~~~I~iwD~~T~e~l~tl~t--~p~p~~~~~~~~~~~ 244 (787)
+.|+|||+.+++ .+++|+. .++|.+|+|++ ++|+++. +..|++||+.+++....+.. +..+
T Consensus 29 ~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~----------- 97 (371)
T d1k8kc_ 29 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRA----------- 97 (371)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSC-----------
T ss_pred CEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccccccccccccccc-----------
Confidence 589999998886 5667764 46999999986 6777765 56899999987765444432 1110
Q ss_pred cccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCC
Q 003907 245 VGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLP 322 (787)
Q Consensus 245 ~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p 322 (787)
...++++| ++|+
T Consensus 98 --v~~i~~~p~~~~l~---------------------------------------------------------------- 111 (371)
T d1k8kc_ 98 --ARCVRWAPNEKKFA---------------------------------------------------------------- 111 (371)
T ss_dssp --EEEEEECTTSSEEE----------------------------------------------------------------
T ss_pred --ccccccccccccce----------------------------------------------------------------
Confidence 12233322 1111
Q ss_pred CCCCCCcccCCccccccccccccCCCceEEEEECCCCc----EEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEe
Q 003907 323 DGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRA----IISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFR 398 (787)
Q Consensus 323 ~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~----~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWd 398 (787)
.+..+|+|++|++.... .......|...|.+++|+|+|++||+|+.||+ |+|||
T Consensus 112 ---------------------~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~-v~v~~ 169 (371)
T d1k8kc_ 112 ---------------------VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK-CRIFS 169 (371)
T ss_dssp ---------------------EEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEE
T ss_pred ---------------------eecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcE-EEEEe
Confidence 23457788888876543 23445689999999999999999999999776 99999
Q ss_pred CCCCcccCCCCCCcccc-CCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCCCCcccccccc
Q 003907 399 IMPSCMRSGSGNHKYDW-NSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPFGGDSGFQTLS 473 (787)
Q Consensus 399 i~~~~~~~~~g~~~~~~-~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~gg~~~~~~H~ 473 (787)
+..............+. ......+.+.. + +...|.+++|+|||++|++++.|++|++||+........+..|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 243 (371)
T d1k8kc_ 170 AYIKEVEERPAPTPWGSKMPFGELMFESS-S-SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243 (371)
T ss_dssp CCCTTTSCCCCCBTTBSCCCTTCEEEECC-C-CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred eccCccccccccccccccccceeeeeecc-C-ccCcEEEEEeecccccccccccCCcceEEeeecccceeeeeccc
Confidence 85421100000000000 01112344332 2 34569999999999999999999999999998765555566664
No 19
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=2.2e-17 Score=173.22 Aligned_cols=244 Identities=14% Similarity=0.096 Sum_probs=158.6
Q ss_pred CCCcEEEEEEeeccCCCCCCCeEEEEEecCcE--EEEEccCCC-ceeEeeeec-cCcEEEEEEecCCCCCCCCCCccccC
Q 003907 55 LKDQVTWAGFDRLEYGPSVFKQVLLLGYQNGF--QVLDVEDAS-NFNELVSKR-DGPVSFLQMQPFPVKDDGCEGFRKLH 130 (787)
Q Consensus 55 ~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G~--qVWdv~~~~-~~~ells~~-dg~V~~v~~lP~P~~~~~~d~F~~sr 130 (787)
.+.+++.+.|+. .+..|+.+..+.. +.||..... .....+..| ..+|.+|++.|.. +.
T Consensus 16 ~~~~~t~l~~~~-------~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~-----------~g 77 (325)
T d1pgua1 16 QRNFTTHLSYDP-------TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK-----------GS 77 (325)
T ss_dssp CTTCCCCCEEET-------TTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSST-----------TC
T ss_pred CCCCeEEEEECC-------CCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCC-----------CC
Confidence 344566677774 2457787877764 555543221 112234444 4689999999742 11
Q ss_pred cEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEE--------e-CCCcEEEEEec
Q 003907 131 PFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVL--------R-FRSSVCMVRCS 201 (787)
Q Consensus 131 pLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL--------~-f~s~V~sV~~s 201 (787)
.+||. ++. +++|+|||+..++....+ . +.++|.+|+++
T Consensus 78 ~~las--gs~-------------------------------Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s 124 (325)
T d1pgua1 78 QYLCS--GDE-------------------------------SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWD 124 (325)
T ss_dssp CEEEE--EET-------------------------------TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEEC
T ss_pred CEEEE--EeC-------------------------------CCCEEEeeecCCcceeeeecccccccccccCcEEEEEEC
Confidence 25543 321 368999998765432222 1 34689999998
Q ss_pred C--CeEEEEe---CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEccceEEEecCCceecCcceecccc
Q 003907 202 P--RIVAVGL---ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQN 276 (787)
Q Consensus 202 ~--~~LaV~~---~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~ 276 (787)
+ +.|+++. +..+++|+..+++.+.++..|..+ ...++++| ..
T Consensus 125 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-------------v~~~~~~~-------~~------------- 171 (325)
T d1pgua1 125 FEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQR-------------INACHLKQ-------SR------------- 171 (325)
T ss_dssp TTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSC-------------EEEEEECS-------SS-------------
T ss_pred CCCCccceeeccccceEEEEeecccccceeeeecccc-------------cccccccc-------cc-------------
Confidence 7 5666543 345999999999888877665542 22334322 10
Q ss_pred CCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEEC
Q 003907 277 LTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDF 356 (787)
Q Consensus 277 lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl 356 (787)
..+ ...+..||.|++||.
T Consensus 172 --------------~~~------------------------------------------------~~~~~~d~~v~~~d~ 189 (325)
T d1pgua1 172 --------------PMR------------------------------------------------SMTVGDDGSVVFYQG 189 (325)
T ss_dssp --------------SCE------------------------------------------------EEEEETTTEEEEEET
T ss_pred --------------cce------------------------------------------------EEEeecccccccccc
Confidence 000 012346889999999
Q ss_pred CCCcEEEEe---ccCCCCeEEEEECCC-CCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccc
Q 003907 357 VTRAIISQF---KAHTSPISALCFDPS-GTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSA 432 (787)
Q Consensus 357 ~s~~~v~~~---~aH~~pIsaLaFSpd-G~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a 432 (787)
...+....+ .+|...|.+++|+|+ +.+||+++.||. |++||+.. + ..+..+. ++ ..
T Consensus 190 ~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~-i~iwd~~~-------~----------~~~~~l~-~~-~~ 249 (325)
T d1pgua1 190 PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKS-------G----------EFLKYIE-DD-QE 249 (325)
T ss_dssp TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTT-------C----------CEEEECC-BT-TB
T ss_pred cccccceecccccCCCCccEEeeeccccceeccccccccc-eeeeeecc-------c----------ccccccc-cc-cc
Confidence 887765554 467889999999996 789999999776 99999854 2 3556664 32 22
Q ss_pred cEEEEEEc---cCCCEEEEEeCCCeEEEEeCCCCC
Q 003907 433 TIQDICFS---HYSQWIAIVSSKGTCHVFVLSPFG 464 (787)
Q Consensus 433 ~I~slaFS---pDg~~LAs~S~dgTVhIwdl~~~g 464 (787)
.|.++.|+ |||++|++++.|++|+|||+....
T Consensus 250 ~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~ 284 (325)
T d1pgua1 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK 284 (325)
T ss_dssp CCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTE
T ss_pred ccccceeeeeccCCCEEEEEeCCCeEEEEECCCCC
Confidence 34444444 689999999999999999998643
No 20
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.77 E-value=1.1e-16 Score=165.58 Aligned_cols=190 Identities=12% Similarity=0.032 Sum_probs=140.8
Q ss_pred CCeEEEEEecCcEEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCCC
Q 003907 74 FKQVLLLGYQNGFQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSHL 153 (787)
Q Consensus 74 ~~~vL~lG~~~G~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~~ 153 (787)
+++.++.+.++.+.|||++ .+.+.++ .|.+.|..+.++|+. + +|++++.++
T Consensus 14 dG~~~a~~~~g~v~v~d~~-~~~~~~~--~~~~~v~~~~~spDg-----------~--~l~~~~~~~------------- 64 (360)
T d1k32a3 14 DGDLIAFVSRGQAFIQDVS-GTYVLKV--PEPLRIRYVRRGGDT-----------K--VAFIHGTRE------------- 64 (360)
T ss_dssp GGGCEEEEETTEEEEECTT-SSBEEEC--SCCSCEEEEEECSSS-----------E--EEEEEEETT-------------
T ss_pred CCCEEEEEECCeEEEEECC-CCcEEEc--cCCCCEEEEEECCCC-----------C--EEEEEEcCC-------------
Confidence 5788899988889999995 4666665 578899999999863 2 566544322
Q ss_pred CCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEEe-CCeEEEEECCCCceeEEEEec
Q 003907 154 GGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVGL-ATQIYCFDALTLENKFSVLTY 230 (787)
Q Consensus 154 ~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~~-~~~I~iwD~~T~e~l~tl~t~ 230 (787)
...|++||+++++..........|.+++|++ +.|+++. +..+++||+.+++....+..+
T Consensus 65 ------------------g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (360)
T d1k32a3 65 ------------------GDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 126 (360)
T ss_dssp ------------------EEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred ------------------CCEEEEEECCCCcEEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecc
Confidence 1479999999998877667778999999998 5777655 557999999999877776654
Q ss_pred CCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcc
Q 003907 231 PVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAG 308 (787)
Q Consensus 231 p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G 308 (787)
... ...++++| ++||++.....
T Consensus 127 ~~~-------------~~~~~~spdg~~la~~~~~~~------------------------------------------- 150 (360)
T d1k32a3 127 EAM-------------ITDFTISDNSRFIAYGFPLKH------------------------------------------- 150 (360)
T ss_dssp SSC-------------CCCEEECTTSCEEEEEEEECS-------------------------------------------
T ss_pred ccc-------------ccchhhccceeeeeeeccccc-------------------------------------------
Confidence 432 24577887 78887643100
Q ss_pred cceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEE
Q 003907 309 LSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTAS 388 (787)
Q Consensus 309 ~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS 388 (787)
....+..++.+++||+.+++. ..+..|...+..++|+|||++|++++
T Consensus 151 --------------------------------~~~~~~~~~~~~v~d~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~s 197 (360)
T d1k32a3 151 --------------------------------GETDGYVMQAIHVYDMEGRKI-FAATTENSHDYAPAFDADSKNLYYLS 197 (360)
T ss_dssp --------------------------------STTCSCCEEEEEEEETTTTEE-EECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred --------------------------------cceeeccccceeeeccccCce-eeecccccccccccccCCCCEEEEEe
Confidence 000123467899999998765 44556778899999999999999999
Q ss_pred cCCCEEEEEeCC
Q 003907 389 VYGNNINIFRIM 400 (787)
Q Consensus 389 ~dG~~IrVWdi~ 400 (787)
.++. +++||..
T Consensus 198 ~~~~-~~~~d~~ 208 (360)
T d1k32a3 198 YRSL-DPSPDRV 208 (360)
T ss_dssp SCCC-CCEECSS
T ss_pred CCCc-eEccccc
Confidence 8665 7888853
No 21
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=2.6e-17 Score=166.32 Aligned_cols=291 Identities=11% Similarity=0.029 Sum_probs=171.1
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEeee--eccCcEEEEEEecCCCCCCCCCCccc
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELVS--KRDGPVSFLQMQPFPVKDDGCEGFRK 128 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ells--~~dg~V~~v~~lP~P~~~~~~d~F~~ 128 (787)
.++|+|.|.-+.|.. +++.|++|+.+| ++|||++......++.. .|.++|.++++.|+
T Consensus 7 ~~~h~d~I~~l~fsp-------~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~------------ 67 (342)
T d1yfqa_ 7 EQAPKDYISDIKIIP-------SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN------------ 67 (342)
T ss_dssp SSCCSSCEEEEEEEG-------GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES------------
T ss_pred CCCCCCCEEEEEEeC-------CCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCC------------
Confidence 567999999999974 356888888776 99999976555444433 58899999999873
Q ss_pred cCcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCC--c--EEEEEecCCe
Q 003907 129 LHPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRS--S--VCMVRCSPRI 204 (787)
Q Consensus 129 srpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s--~--V~sV~~s~~~ 204 (787)
...+|++ ++. +++|++|++..+.......... . ......+...
T Consensus 68 ~~~~l~s-g~~--------------------------------d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (342)
T d1yfqa_ 68 TDLQIYV-GTV--------------------------------QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDK 114 (342)
T ss_dssp SSEEEEE-EET--------------------------------TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTE
T ss_pred CCCEEEE-ccc--------------------------------ccceeeeeccccccccccccccccccccccccccccc
Confidence 1124443 221 2589999999888777765443 1 2223334455
Q ss_pred EEE-EeCCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEc--cceEEEecCCceecCcceeccccCCCCC
Q 003907 205 VAV-GLATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVG--PRWLAYASNTLLLSNSGRLSPQNLTPSG 281 (787)
Q Consensus 205 LaV-~~~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAls--pr~LAyas~~~~l~~~g~~s~q~lt~~~ 281 (787)
++. +.+..+++||+.+................ ......+.+. ...++.++.+..+ ..|+......
T Consensus 115 ~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~~i-----~~~~~~~~~~ 182 (342)
T d1yfqa_ 115 LIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-------KVKNKIFTMDTNSSRLIVGMNNSQV-----QWFRLPLCED 182 (342)
T ss_dssp EEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-------SSCCCEEEEEECSSEEEEEESTTEE-----EEEESSCCTT
T ss_pred ccccccccccceeeccccccceeeecccccccc-------cceeeeeeeeccCCceeeecCCCcE-----EEEecccCcc
Confidence 555 55678999998766544444321110000 0001122332 2455555443211 1122111100
Q ss_pred cCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcE
Q 003907 282 VSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAI 361 (787)
Q Consensus 282 ~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~ 361 (787)
.. ..... .. ...........+ ........+..+|.+.+|++.....
T Consensus 183 ~~--------~~~~~-----------------~~------~~~~~~~~~~~~---~~~~~~~~~s~dg~~~v~~~~~~~~ 228 (342)
T d1yfqa_ 183 DN--------GTIEE-----------------SG------LKYQIRDVALLP---KEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp CC--------CEEEE-----------------CS------CSSCEEEEEECS---GGGCEEEEEETTSEEEEEECCTTCC
T ss_pred cc--------eeeee-----------------cc------cccceeeeEeec---CCCCEEEeecCCCeEEEEEecCCcc
Confidence 00 00000 00 000000000000 0111233556789999999864321
Q ss_pred ---------E------EEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEe
Q 003907 362 ---------I------SQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLH 426 (787)
Q Consensus 362 ---------v------~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~ 426 (787)
. .....|..+|++|+|+|+|.+||||+.||. |+|||+.. + .++.++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~-v~vWD~~~-------~----------~~l~~~~ 290 (342)
T d1yfqa_ 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-ISCWNLQT-------R----------KKIKNFA 290 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-EEEEETTT-------T----------EEEEECC
T ss_pred eeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCE-EEEEECCC-------C----------cEEEEec
Confidence 1 112357779999999999999999999886 99999864 2 5666665
Q ss_pred cccccccEEEEEEccCCCEEEEEeCCCeEEEEeCC
Q 003907 427 RGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLS 461 (787)
Q Consensus 427 rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~ 461 (787)
++. .+..++|+|||++||+++.|+++++|...
T Consensus 291 ~~~---~~~~~~~s~~~~~l~~a~sdd~~~~~~~~ 322 (342)
T d1yfqa_ 291 KFN---EDSVVKIACSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp CCS---SSEEEEEEECSSEEEEEEECTHHHHCSSS
T ss_pred CCC---CCEEEEEEeCCCEEEEEEcCCcEEEeeee
Confidence 432 35568899999999999999999888653
No 22
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.76 E-value=1.2e-16 Score=162.15 Aligned_cols=97 Identities=18% Similarity=0.270 Sum_probs=76.9
Q ss_pred ccCCCceEEEEECCCCcEEE-EeccCCCCeEEEEECCC----------CCEEEEEEcCCCEEEEEeCCCCcccCCCCCCc
Q 003907 344 DMDNAGIVVVKDFVTRAIIS-QFKAHTSPISALCFDPS----------GTLLVTASVYGNNINIFRIMPSCMRSGSGNHK 412 (787)
Q Consensus 344 s~~~dG~V~IwDl~s~~~v~-~~~aH~~pIsaLaFSpd----------G~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~ 412 (787)
.+..+|.|++||+.+++.+. .+.+|..+|.+++|+|+ +.+|||||.|++ |+|||+... +
T Consensus 179 ~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~-i~iw~~~~~------~--- 248 (287)
T d1pgua2 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN-IFIYSVKRP------M--- 248 (287)
T ss_dssp EEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC-EEEEESSCT------T---
T ss_pred cccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCe-EEEEECCCC------C---
Confidence 34568999999999988665 46799999999999875 468999999776 999998531 1
Q ss_pred cccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeC
Q 003907 413 YDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVL 460 (787)
Q Consensus 413 ~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl 460 (787)
..+ ....| |...|.+++|+||+ .|++++.|++|+||++
T Consensus 249 -------~~~-~~~~~-h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 249 -------KII-KALNA-HKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp -------CCE-EETTS-STTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred -------eEE-EEeCC-CCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 233 33345 34579999999997 5888999999999996
No 23
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=3.3e-16 Score=158.78 Aligned_cols=233 Identities=11% Similarity=0.088 Sum_probs=156.3
Q ss_pred CCCCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccC
Q 003907 52 SEDLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLH 130 (787)
Q Consensus 52 ~~~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~sr 130 (787)
..+|++.|..+.|+. |++|..+| +++||+.. ....|.+.|..+.+.+. .
T Consensus 9 l~gH~~~I~~l~~s~-----------l~sgs~Dg~v~~Wd~~~------~~~~h~~~V~~~~~~~~-------------~ 58 (287)
T d1pgua2 9 ISGHNKGITALTVNP-----------LISGSYDGRIMEWSSSS------MHQDHSNLIVSLDNSKA-------------Q 58 (287)
T ss_dssp ECCCSSCEEEEETTT-----------TEEEETTSCEEETTTTE------EECCCCSCEEEEECCST-------------T
T ss_pred ECCCCCceEEEEECc-----------EEEEeCCCeEEEEECCC------CCCCCCCCEEEEEecCC-------------C
Confidence 467999999988852 67777776 89999743 23567788988876532 1
Q ss_pred cEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEE
Q 003907 131 PFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVG 208 (787)
Q Consensus 131 pLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~ 208 (787)
.++.++. +++|++|++.+ .++.+.+..+.+++ .+++++
T Consensus 59 -~~~s~s~---------------------------------D~~v~~w~~~~------~~~~~~~~~~~~~~~~~~~~~~ 98 (287)
T d1pgua2 59 -EYSSISW---------------------------------DDTLKVNGITK------HEFGSQPKVASANNDGFTAVLT 98 (287)
T ss_dssp -CCEEEET---------------------------------TTEEEETTEEE------EECSSCEEEEEECSSSEEEEEE
T ss_pred -eEEEEee---------------------------------ccccccccccc------cccccceeeeeeccCCceEEEe
Confidence 2333221 25899998743 34566666677766 455567
Q ss_pred eCCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCc
Q 003907 209 LATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPST 286 (787)
Q Consensus 209 ~~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~ 286 (787)
.++.+.+|+..+++....+..... ..++.+ ..++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~v~-------------------------- 136 (287)
T d1pgua2 99 NDDDLLILQSFTGDIIKSVRLNSP----------------GSAVSLSQNYVAVG-------------------------- 136 (287)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSC----------------EEEEEECSSEEEEE--------------------------
T ss_pred ecccceeeeccceeeeeeccccce----------------eeeeeccCcceeee--------------------------
Confidence 777899999988887666543211 112211 111111
Q ss_pred CCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEec
Q 003907 287 SPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFK 366 (787)
Q Consensus 287 sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~ 366 (787)
+..++.|++|++...+....+.
T Consensus 137 ----------------------------------------------------------~~~~~~v~~~~~~~~~~~~~~~ 158 (287)
T d1pgua2 137 ----------------------------------------------------------LEEGNTIQVFKLSDLEVSFDLK 158 (287)
T ss_dssp ----------------------------------------------------------ETTTSCEEEEETTEEEEEEECS
T ss_pred ----------------------------------------------------------ccccceeeeeeccccceeeeee
Confidence 1234578999998766666554
Q ss_pred -cCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccC---
Q 003907 367 -AHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHY--- 442 (787)
Q Consensus 367 -aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpD--- 442 (787)
.|..+|++|+|+|+|++||+++.+|. |++||+.. + ........+ +...|.+++|+|+
T Consensus 159 ~~~~~~v~~~~~s~~~~~l~~g~~dg~-i~i~d~~~-------~----------~~~~~~~~~-h~~~v~~~~~~p~~~~ 219 (287)
T d1pgua2 159 TPLRAKPSYISISPSETYIAAGDVMGK-ILLYDLQS-------R----------EVKTSRWAF-RTSKINAISWKPAEKG 219 (287)
T ss_dssp SCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTT-------T----------EEEECCSCC-CSSCEEEEEECCCC--
T ss_pred eccCCceeEEEeccCcccccccccccc-ccceeecc-------c----------ccccccccc-cccccceeeecccccc
Confidence 58889999999999999999999776 99999854 2 222222222 4467999999875
Q ss_pred -------CCEEEEEeCCCeEEEEeCCCCCCcc-cccccc
Q 003907 443 -------SQWIAIVSSKGTCHVFVLSPFGGDS-GFQTLS 473 (787)
Q Consensus 443 -------g~~LAs~S~dgTVhIwdl~~~gg~~-~~~~H~ 473 (787)
+++||+++.|++|+||++...+... .+.+|.
T Consensus 220 ~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~ 258 (287)
T d1pgua2 220 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK 258 (287)
T ss_dssp ----CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSST
T ss_pred cccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCC
Confidence 5689999999999999997644332 234553
No 24
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=2.5e-16 Score=159.72 Aligned_cols=247 Identities=14% Similarity=0.104 Sum_probs=136.9
Q ss_pred CEEEEEECCCCeEEEEEeCC-CcEEEEEecCCeEEEEe-CCeEEEEECCCCceeEEEEecCCcccCCCCcccccccccee
Q 003907 173 TAVRFYSFQSHCYEHVLRFR-SSVCMVRCSPRIVAVGL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPM 250 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~-s~V~sV~~s~~~LaV~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~l 250 (787)
++|+|||+++++++++++.+ ..|.++++++++|+++. ++.+++|+................ ....
T Consensus 37 g~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 103 (342)
T d2ovrb2 37 NTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTST-------------VRCM 103 (342)
T ss_dssp SCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-------------EEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCCCEEEEEeCCCccccceecccccccccccccceeccccccee-------------Eeee
Confidence 68999999999999999865 59999999999888765 567999998887655444332221 1111
Q ss_pred EEccceEEEecCCce--ecC--cceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCC
Q 003907 251 AVGPRWLAYASNTLL--LSN--SGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSS 326 (787)
Q Consensus 251 Alspr~LAyas~~~~--l~~--~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~ 326 (787)
...+..++.+..+.. +.. .+.................+. ....+....|....+..-. ...+.........
T Consensus 104 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~d~~----~~~~~~~~~~~~~ 178 (342)
T d2ovrb2 104 HLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD-GRRVVSGAYDFMVKVWDPE----TETCLHTLQGHTN 178 (342)
T ss_dssp EEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC-SSCEEEEETTSCEEEEEGG----GTEEEEEECCCSS
T ss_pred ecccccccccccceeEEEeecccccceeeeecccccceeeccc-cceeeeecCCCeEEEeecc----cceeeEEEcCccc
Confidence 222233333322211 100 000000000000000000000 0011111111110000000 0000000000000
Q ss_pred CCcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccC
Q 003907 327 SPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRS 406 (787)
Q Consensus 327 ~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~ 406 (787)
.... ....+..++++..||.|++||+..++.+..+.+|...|.+++|++ ++|++++.||. |+|||+...
T Consensus 179 ~~~~----~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~s~d~~-i~iwd~~~~---- 247 (342)
T d2ovrb2 179 RVYS----LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADST-VKIWDIKTG---- 247 (342)
T ss_dssp CEEE----EEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET--TEEEEEETTSC-EEEEETTTC----
T ss_pred cccc----ccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC--CEEEEEcCCCE-EEEEecccc----
Confidence 0001 111122355778999999999999999999999999999988865 69999999776 999998541
Q ss_pred CCCCCccccCCcceEEEEEeccc-ccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q 003907 407 GSGNHKYDWNSSHVHLYKLHRGI-TSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPF 463 (787)
Q Consensus 407 ~~g~~~~~~~~s~~~l~~l~rG~-~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~ 463 (787)
.....+.... +...+.+++|+ +++|++++.||+|+|||++..
T Consensus 248 -------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg 290 (342)
T d2ovrb2 248 -------------QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 290 (342)
T ss_dssp -------------CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred -------------cccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCC
Confidence 2344443221 12346666665 569999999999999999764
No 25
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=6.7e-16 Score=161.66 Aligned_cols=233 Identities=10% Similarity=0.072 Sum_probs=157.4
Q ss_pred CCCCcEEEEEEeeccCCCCCCCeEEEEEecCc-EEEEEccCC-CceeEeeeeccCcEEEEEEecCCCCCCCCCCccccCc
Q 003907 54 DLKDQVTWAGFDRLEYGPSVFKQVLLLGYQNG-FQVLDVEDA-SNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHP 131 (787)
Q Consensus 54 ~~~~~v~wa~Fd~l~~~~~~~~~vL~lG~~~G-~qVWdv~~~-~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srp 131 (787)
+|++.|..+.|.. +++.|++|..+| ++|||+... ..+...+..|...|..+.+.|+. .
T Consensus 95 ~h~~~I~~v~~s~-------dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------~ 154 (337)
T d1gxra_ 95 NRDNYIRSCKLLP-------DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS-------------K 154 (337)
T ss_dssp CTTSBEEEEEECT-------TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS-------------S
T ss_pred CCCCcEEEEEEcC-------CCCEEEEeeccccccccccccccccccccccccccccccccccccc-------------c
Confidence 4666788888853 356788887776 999998643 23444566777889999988642 2
Q ss_pred EEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeC-CCcEEEEEecC--CeEEEE
Q 003907 132 FLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRF-RSSVCMVRCSP--RIVAVG 208 (787)
Q Consensus 132 LLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f-~s~V~sV~~s~--~~LaV~ 208 (787)
+|++.+. +..|++||+.++++...... ...|.++++++ +.++++
T Consensus 155 ~l~s~~~---------------------------------d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~ 201 (337)
T d1gxra_ 155 VCFSCCS---------------------------------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EEEEEET---------------------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ccccccc---------------------------------cccccccccccccccccccccccccccccccccccccccc
Confidence 5554221 25799999999999888875 46899999977 566665
Q ss_pred e-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCC
Q 003907 209 L-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPS 285 (787)
Q Consensus 209 ~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s 285 (787)
. ++.|++||+.+++.+..+. ++.+ ...++++| ++|+.++.+..+ ..|+.-++
T Consensus 202 ~~d~~v~i~d~~~~~~~~~~~-~~~~-------------i~~l~~~~~~~~l~~~~~d~~i-----~i~d~~~~------ 256 (337)
T d1gxra_ 202 GLDNTVRSWDLREGRQLQQHD-FTSQ-------------IFSLGYCPTGEWLAVGMESSNV-----EVLHVNKP------ 256 (337)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-CSSC-------------EEEEEECTTSSEEEEEETTSCE-----EEEETTSS------
T ss_pred cccccccccccccceeecccc-cccc-------------eEEEEEcccccccceecccccc-----cccccccc------
Confidence 5 5689999999998776654 2221 34577777 678877654211 11221110
Q ss_pred cCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEe
Q 003907 286 TSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQF 365 (787)
Q Consensus 286 ~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~ 365 (787)
... ... ...+....+.++++.+ .+++++.||.|+|||+.+++.+.++
T Consensus 257 ------~~~-----------------~~~------~~~~~i~~v~~s~~g~----~l~s~s~Dg~i~iwd~~~~~~~~~~ 303 (337)
T d1gxra_ 257 ------DKY-----------------QLH------LHESCVLSLKFAYCGK----WFVSTGKDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp ------CEE-----------------EEC------CCSSCEEEEEECTTSS----EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ------ccc-----------------ccc------ccccccceEEECCCCC----EEEEEeCCCeEEEEECCCCCEEEEc
Confidence 000 000 0001111222333332 3456778999999999999988776
Q ss_pred ccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeC
Q 003907 366 KAHTSPISALCFDPSGTLLVTASVYGNNINIFRI 399 (787)
Q Consensus 366 ~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi 399 (787)
. |..+|.+++|+|+|++||||+.||+ |+|||+
T Consensus 304 ~-~~~~v~~~~~s~d~~~l~t~s~D~~-I~vWdl 335 (337)
T d1gxra_ 304 K-ESSSVLSCDISVDDKYIVTGSGDKK-ATVYEV 335 (337)
T ss_dssp E-CSSCEEEEEECTTSCEEEEEETTSC-EEEEEE
T ss_pred c-CCCCEEEEEEeCCCCEEEEEeCCCe-EEEEEE
Confidence 4 7799999999999999999999776 999997
No 26
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=6.4e-15 Score=149.93 Aligned_cols=236 Identities=14% Similarity=0.106 Sum_probs=144.1
Q ss_pred CEEEEEECCCCeEEEEEeCC-CcEEEEEecC-CeEEEE-eCCeEEEEECCCCceeEEEEecCCcccCCCCccccccccce
Q 003907 173 TAVRFYSFQSHCYEHVLRFR-SSVCMVRCSP-RIVAVG-LATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGP 249 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~-s~V~sV~~s~-~~LaV~-~~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~ 249 (787)
++|+|||+++++++++++.+ +.|.+|++++ ++|+++ .++.|++|+..+.+............ ....
T Consensus 33 g~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~-----------~~~~ 101 (355)
T d1nexb2 33 KMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTV-----------RCLD 101 (355)
T ss_dssp TEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCCSSCE-----------EEEE
T ss_pred CeEEEEECCCCcEEEEEECCCCCEEEEEEcCCCEEEEEecccccccccccccccccccccccccc-----------cccc
Confidence 69999999999999999865 6999999987 566665 46689999999887666554322210 0112
Q ss_pred eEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCC
Q 003907 250 MAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSS 327 (787)
Q Consensus 250 lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~ 327 (787)
+...+ ++++.++.+..+ ..|+.-+................ ........ ........+ ...
T Consensus 102 ~~~~~~~~~~~~~~~d~~i-----~iw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~--------~~~ 163 (355)
T d1nexb2 102 IVEYKNIKYIVTGSRDNTL-----HVWKLPKESSVPDHGEEHDYPLV-FHTPEENP----YFVGVLRGH--------MAS 163 (355)
T ss_dssp EEEETTEEEEEEEETTSEE-----EEEECCC-----------CCCEE-ESCTTTCT----TEEEEEECC--------SSC
T ss_pred cccccccceeeeecCCCcE-----EEEEccCCceeccccccceeccc-eecccccc----ceeeeeeec--------ccc
Confidence 23333 667776654211 11222111000000000000000 00000000 000000000 000
Q ss_pred CcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCC
Q 003907 328 PVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSG 407 (787)
Q Consensus 328 ~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~ 407 (787)
... ....+.....+..++.|++||+.+++.+..+.+|...+.++.|+|++.++++++.|+. |+|||+..
T Consensus 164 v~~----~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-i~i~d~~~------ 232 (355)
T d1nexb2 164 VRT----VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIWDLEN------ 232 (355)
T ss_dssp EEE----EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEETTT------
T ss_pred ccc----cccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccce-EEeeeccc------
Confidence 000 0011112345678899999999999999999999999999999999999999999776 99999854
Q ss_pred CCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q 003907 408 SGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPF 463 (787)
Q Consensus 408 ~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~ 463 (787)
+ ..+..+. + +...|.+++|++ ++|++++.||+|++||++..
T Consensus 233 -~----------~~~~~~~-~-h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~ 273 (355)
T d1nexb2 233 -G----------ELMYTLQ-G-HTALVGLLRLSD--KFLVSAAADGSIRGWDANDY 273 (355)
T ss_dssp -C----------CEEEEEC-C-CSSCCCEEEECS--SEEEEECTTSEEEEEETTTC
T ss_pred -c----------ccccccc-c-cccccccccccc--ceeeeeeccccccccccccc
Confidence 2 3555554 4 345689999874 69999999999999999764
No 27
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=3.3e-15 Score=160.21 Aligned_cols=83 Identities=18% Similarity=0.221 Sum_probs=63.9
Q ss_pred CceEEEEECCCCcEEEEec-------------cCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccc
Q 003907 348 AGIVVVKDFVTRAIISQFK-------------AHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYD 414 (787)
Q Consensus 348 dG~V~IwDl~s~~~v~~~~-------------aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~ 414 (787)
.+.|+|||+.+++.+..+. +|...|++|+|+|||++|||+|.|+ .|+|||+.+ |
T Consensus 255 ~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~-~v~vWd~~~-------g----- 321 (393)
T d1sq9a_ 255 FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG-KLRFWDVKT-------K----- 321 (393)
T ss_dssp EEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS-EEEEEETTT-------T-----
T ss_pred cceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCC-EEEEEECCC-------C-----
Confidence 3568899998887777664 7999999999999999999999966 499999965 4
Q ss_pred cCCcceEEEEEecccccccE----EEEEEccCCCEEEEEe
Q 003907 415 WNSSHVHLYKLHRGITSATI----QDICFSHYSQWIAIVS 450 (787)
Q Consensus 415 ~~~s~~~l~~l~rG~~~a~I----~slaFSpDg~~LAs~S 450 (787)
.++++|+ |+. ..| ..++|+||+..+++++
T Consensus 322 -----~~~~~l~-gH~-~~v~~~~~~~~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 322 -----ERITTLN-MHC-DDIEIEEDILAVDEHGDSLAEPG 354 (393)
T ss_dssp -----EEEEEEE-CCG-GGCSSGGGCCCBCTTSCBCSSCC
T ss_pred -----CEEEEEC-CcC-CcccCCccEEEECCCCCEEEEcc
Confidence 5777775 433 233 3577888887776443
No 28
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.65 E-value=9.7e-14 Score=141.27 Aligned_cols=280 Identities=11% Similarity=0.075 Sum_probs=168.9
Q ss_pred eEEEEEec-CcEEEEEccCCCceeEeeeecc--CcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCC
Q 003907 76 QVLLLGYQ-NGFQVLDVEDASNFNELVSKRD--GPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSH 152 (787)
Q Consensus 76 ~vL~lG~~-~G~qVWdv~~~~~~~ells~~d--g~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~ 152 (787)
..|+++.. +.++|||++. +++...+..++ ..+..+.+.|+. + +|+++...
T Consensus 2 ~~~vt~~~d~~v~v~D~~s-~~~~~~i~~~~~~~~~~~i~~spDg-----------~--~l~v~~~~------------- 54 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEK-MAVDKVITIADAGPTPMVPMVAPGG-----------R--IAYATVNK------------- 54 (337)
T ss_dssp EEEEEEETTTEEEEEETTT-TEEEEEEECTTCTTCCCCEEECTTS-----------S--EEEEEETT-------------
T ss_pred eEEEEEcCCCEEEEEECCC-CeEEEEEECCCCCCCccEEEECCCC-----------C--EEEEEECC-------------
Confidence 35666665 5699999964 66666665443 446788888752 2 45443321
Q ss_pred CCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCC------cEEEEEecC--CeEEEEe-------------CC
Q 003907 153 LGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRS------SVCMVRCSP--RIVAVGL-------------AT 211 (787)
Q Consensus 153 ~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s------~V~sV~~s~--~~LaV~~-------------~~ 211 (787)
.++|.+||+++++.+.++..+. .+..+++++ +.|+++. +.
T Consensus 55 -------------------~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 115 (337)
T d1pbyb_ 55 -------------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115 (337)
T ss_dssp -------------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred -------------------CCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeecccccc
Confidence 2589999999999999997653 234677776 5565543 34
Q ss_pred eEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecC--cceecccc-CCCCCcCCCc
Q 003907 212 QIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSN--SGRLSPQN-LTPSGVSPST 286 (787)
Q Consensus 212 ~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~--~g~~s~q~-lt~~~~s~s~ 286 (787)
.+.+||..+++.+.++.....+ ..++++| ++|+.++.+..+++ .+...... .........+
T Consensus 116 ~~~~~d~~~~~~~~~~~~~~~~--------------~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 181 (337)
T d1pbyb_ 116 RVALYDAETLSRRKAFEAPRQI--------------TMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA 181 (337)
T ss_dssp EEEEEETTTTEEEEEEECCSSC--------------CCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBC
T ss_pred ceeeccccCCeEEEeccccCCc--------------eEEEEcCCCCEEEEEcCCcceeeeecCcEEEEeecCCcccccee
Confidence 6899999999988887754332 3467877 67766665433221 11110000 0000000001
Q ss_pred CCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCC--cccCCccccccccccccCCCceEEEEECCCCcEEE-
Q 003907 287 SPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSP--VSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIIS- 363 (787)
Q Consensus 287 sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~--~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~- 363 (787)
+|.+..+ .+...... ...................++.+.+||+.++....
T Consensus 182 ~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T d1pbyb_ 182 QPDVLAV---------------------------WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp CCBCCCC---------------------------CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred cCCccee---------------------------eccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEE
Confidence 1110000 00000000 00000000000011234456789999999887554
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCC
Q 003907 364 QFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYS 443 (787)
Q Consensus 364 ~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg 443 (787)
.+..|...+..++++|++.+++.++ + .|++||+.. + ..+..+.-+ ..+.+++|||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-~i~v~d~~~-------~----------~~~~~~~~~---~~~~~~~~s~dG 291 (337)
T d1pbyb_ 235 EVRIMDVFYFSTAVNPAKTRAFGAY--N-VLESFDLEK-------N----------ASIKRVPLP---HSYYSVNVSTDG 291 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEE--S-EEEEEETTT-------T----------EEEEEEECS---SCCCEEEECTTS
T ss_pred EecCCCcceEEEEecccceEEEEcc--c-cEEEEECCC-------C----------cEEEEEcCC---CCEEEEEECCCC
Confidence 4567888899999999999998775 3 599999965 2 345554422 357899999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCCC
Q 003907 444 QWIAIVSSKGTCHVFVLSPFGG 465 (787)
Q Consensus 444 ~~LAs~S~dgTVhIwdl~~~gg 465 (787)
++|++++.+++|.|||+...+.
T Consensus 292 ~~l~v~~~~~~i~v~D~~t~~~ 313 (337)
T d1pbyb_ 292 STVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp CEEEEESBSSEEEEEETTTCCE
T ss_pred CEEEEEeCCCcEEEEECCCCcE
Confidence 9999999999999999987543
No 29
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.63 E-value=2.2e-14 Score=144.34 Aligned_cols=263 Identities=14% Similarity=0.056 Sum_probs=147.3
Q ss_pred eeEeeeeccCcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCCCCCcccCCcCCCCCCCCCCCCEEE
Q 003907 97 FNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSHLGGVRDGMMDSQSGNCVNSPTAVR 176 (787)
Q Consensus 97 ~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~~~~~r~g~~~~~~~~~~~~p~tVr 176 (787)
+.+++..|++.|..|+|.|+ ..+||+.+. +++|+
T Consensus 3 ~v~~~~~h~d~I~~l~fsp~-------------~~~L~s~s~---------------------------------Dg~v~ 36 (342)
T d1yfqa_ 3 IVQIEQAPKDYISDIKIIPS-------------KSLLLITSW---------------------------------DGSLT 36 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGG-------------GTEEEEEET---------------------------------TSEEE
T ss_pred eEEcCCCCCCCEEEEEEeCC-------------CCEEEEEEC---------------------------------CCeEE
Confidence 45677888899999999975 237766332 36999
Q ss_pred EEECCCCe----EEEEEeCCCcEEEEEecC---CeEEEEe-CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccc
Q 003907 177 FYSFQSHC----YEHVLRFRSSVCMVRCSP---RIVAVGL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYG 248 (787)
Q Consensus 177 lWdlktg~----~v~tL~f~s~V~sV~~s~---~~LaV~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~ 248 (787)
|||+.++. +...+.+..+|.+|+|++ .+|++|. ++.|++||..+.........+.... ..
T Consensus 37 iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~------------~~ 104 (342)
T d1yfqa_ 37 VYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANL------------GI 104 (342)
T ss_dssp EEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCS------------CE
T ss_pred EEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccccccccccccccc------------cc
Confidence 99986553 344456778999999975 3677665 5689999998887655544322210 01
Q ss_pred eeEE--ccceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCC
Q 003907 249 PMAV--GPRWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSS 326 (787)
Q Consensus 249 ~lAl--spr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~ 326 (787)
.... +...++.++.+..+ ..|+...+... .... ..+...... ...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~-----~~wd~~~~~~~--------~~~~----------------~~~~~~~~~----~~~ 151 (342)
T d1yfqa_ 105 CRICKYGDDKLIAASWDGLI-----EVIDPRNYGDG--------VIAV----------------KNLNSNNTK----VKN 151 (342)
T ss_dssp EEEEEETTTEEEEEETTSEE-----EEECHHHHTTB--------CEEE----------------EESCSSSSS----SCC
T ss_pred cccccccccccccccccccc-----ceeeccccccc--------eeee----------------ccccccccc----cee
Confidence 1111 22455554433110 11221110000 0000 000000000 000
Q ss_pred CCcccCCccccccccccccCCCceEEEEECCCCcEEE---EeccCCCCeEEEEE-CCCCCEEEEEEcCCCEEEEEeCCCC
Q 003907 327 SPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIIS---QFKAHTSPISALCF-DPSGTLLVTASVYGNNINIFRIMPS 402 (787)
Q Consensus 327 ~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~---~~~aH~~pIsaLaF-SpdG~lLATaS~dG~~IrVWdi~~~ 402 (787)
.... ..........+..+|.|++||+...+... ....+...+.+.++ +.++..+++++.+|. +.+|+....
T Consensus 152 ~~~~----~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~~v~~~~~~ 226 (342)
T d1yfqa_ 152 KIFT----MDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQ 226 (342)
T ss_dssp CEEE----EEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTT
T ss_pred eeee----eeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCe-EEEEEecCC
Confidence 0000 00011123456789999999998765322 23344455555554 557889999999775 899998542
Q ss_pred cccCCCCCCccccCCcceEEEEEecc-----cccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCCC
Q 003907 403 CMRSGSGNHKYDWNSSHVHLYKLHRG-----ITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPFG 464 (787)
Q Consensus 403 ~~~~~~g~~~~~~~~s~~~l~~l~rG-----~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~g 464 (787)
... ............+. .+...|.+|+|+|++++||+|+.||+|+|||++...
T Consensus 227 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~ 284 (342)
T d1yfqa_ 227 GDD---------YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CCS---------TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred cce---------eeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCc
Confidence 110 00000111111111 122358999999999999999999999999998643
No 30
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.5e-13 Score=135.58 Aligned_cols=211 Identities=15% Similarity=0.174 Sum_probs=133.5
Q ss_pred CEEEEEECCCCeEEEEEeCC-CcEEEEEecCCeEEEEe-CCeEEEEECCCCceeEEEEecCCcccCCCCcccccccccee
Q 003907 173 TAVRFYSFQSHCYEHVLRFR-SSVCMVRCSPRIVAVGL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPM 250 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~-s~V~sV~~s~~~LaV~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~l 250 (787)
++|+|||+++++++++++.+ ..|.+|++++++|+++. ++.|++|++.+++........... ....
T Consensus 35 g~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~-------------~~~~ 101 (293)
T d1p22a2 35 NTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-------------VLHL 101 (293)
T ss_dssp SCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSC-------------EEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCEeeeecccceeecccccccccccccccccccccccccccc-------------cccc
Confidence 68999999999999999865 69999999999999866 557999999998866655432221 0011
Q ss_pred EEccceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcc
Q 003907 251 AVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVS 330 (787)
Q Consensus 251 Alspr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s 330 (787)
......++.+..... ...|+........ .. ..+..+ ........
T Consensus 102 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----------~~---------------~~~~~~------~~~v~~~~ 145 (293)
T d1p22a2 102 RFNNGMMVTCSKDRS-----IAVWDMASPTDIT----------LR---------------RVLVGH------RAAVNVVD 145 (293)
T ss_dssp ECCTTEEEEEETTSC-----EEEEECSSSSCCE----------EE---------------EEECCC------SSCEEEEE
T ss_pred cccccceeecccccc-----eeEeecccccccc----------cc---------------cccccc------ccccccce
Confidence 111144444433210 0111111100000 00 000000 00000000
Q ss_pred cCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCC
Q 003907 331 PNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGN 410 (787)
Q Consensus 331 ~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~ 410 (787)
+ .......+..|+.|++||+.+++.+..+.+|...|..+.++ +.+|++++.||+ |+|||+.. +
T Consensus 146 ~------~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~-i~i~d~~~-------~- 208 (293)
T d1p22a2 146 F------DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT-IRLWDIEC-------G- 208 (293)
T ss_dssp E------ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSC-EEEEETTT-------C-
T ss_pred e------cccccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCE-EEEEeccc-------c-
Confidence 0 00112245678999999999999999999999999988885 568999999776 99999854 2
Q ss_pred CccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCC
Q 003907 411 HKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSP 462 (787)
Q Consensus 411 ~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~ 462 (787)
..+..+. +. ...|. .+++++++|++++.||+|+|||+..
T Consensus 209 ---------~~~~~~~-~~-~~~v~--~~~~~~~~l~sg~~dg~i~iwd~~~ 247 (293)
T d1p22a2 209 ---------ACLRVLE-GH-EELVR--CIRFDNKRIVSGAYDGKIKVWDLVA 247 (293)
T ss_dssp ---------CEEEEEC-CC-SSCEE--EEECCSSEEEEEETTSCEEEEEHHH
T ss_pred ---------eeeeeec-cc-ceeee--eccccceEEEEEcCCCEEEEEECCC
Confidence 3444443 32 23344 4678899999999999999999864
No 31
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.62 E-value=9.1e-13 Score=132.29 Aligned_cols=261 Identities=16% Similarity=0.103 Sum_probs=161.3
Q ss_pred EEEEecC-cEEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCCCCCc
Q 003907 78 LLLGYQN-GFQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSHLGGV 156 (787)
Q Consensus 78 L~lG~~~-G~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~~~~~ 156 (787)
.+.+..+ .+.|||++ ++++.+.+...+ .+..+.+.|+. + .|++....
T Consensus 5 yV~~~~~~~v~v~D~~-t~~~~~~i~~g~-~p~~va~spdG-----------~--~l~v~~~~----------------- 52 (301)
T d1l0qa2 5 YIANSESDNISVIDVT-SNKVTATIPVGS-NPMGAVISPDG-----------T--KVYVANAH----------------- 52 (301)
T ss_dssp EEEETTTTEEEEEETT-TTEEEEEEECSS-SEEEEEECTTS-----------S--EEEEEEGG-----------------
T ss_pred EEEECCCCEEEEEECC-CCeEEEEEECCC-CceEEEEeCCC-----------C--EEEEEECC-----------------
Confidence 3445454 49999995 466666665543 45778888742 2 55542211
Q ss_pred ccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEEe--CCeEEEEECCCCceeEEEEecCC
Q 003907 157 RDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVGL--ATQIYCFDALTLENKFSVLTYPV 232 (787)
Q Consensus 157 r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~~--~~~I~iwD~~T~e~l~tl~t~p~ 232 (787)
.++|++||+++++.++++.....+..+.+++ +.++++. +..+.+||..+++....+..+..
T Consensus 53 ---------------~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (301)
T d1l0qa2 53 ---------------SNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS 117 (301)
T ss_dssp ---------------GTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred ---------------CCEEEEEECCCCceeeeeeccccccccccccccccccccccccceeeecccccceeeeecccccc
Confidence 2589999999999999999888889999977 4555443 34799999999988888775443
Q ss_pred cccCCCCccccccccceeEEcc--ceEEEecC-CceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhccc
Q 003907 233 PQLAGQGAVGINVGYGPMAVGP--RWLAYASN-TLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGL 309 (787)
Q Consensus 233 p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~-~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~ 309 (787)
+ ..++++| +++..+.. +.. ...++..+. ..+
T Consensus 118 ~--------------~~~~~~~dg~~~~~~~~~~~~-----~~~~~~~~~------------~~~--------------- 151 (301)
T d1l0qa2 118 P--------------LGLALSPDGKKLYVTNNGDKT-----VSVINTVTK------------AVI--------------- 151 (301)
T ss_dssp E--------------EEEEECTTSSEEEEEETTTTE-----EEEEETTTT------------EEE---------------
T ss_pred c--------------eEEEeecCCCeeeeeeccccc-----eeeeecccc------------cee---------------
Confidence 2 3466666 45444332 110 000111110 000
Q ss_pred ceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEc
Q 003907 310 SKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASV 389 (787)
Q Consensus 310 ~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~ 389 (787)
+.+. ..........+++.+... ......+.+.+|+....+....+..+. ....++|+++|+.++.+..
T Consensus 152 -~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~v~~~ 219 (301)
T d1l0qa2 152 -NTVS-------VGRSPKGIAVTPDGTKVY---VANFDSMSISVIDTVTNSVIDTVKVEA-APSGIAVNPEGTKAYVTNV 219 (301)
T ss_dssp -EEEE-------CCSSEEEEEECTTSSEEE---EEETTTTEEEEEETTTTEEEEEEECSS-EEEEEEECTTSSEEEEEEE
T ss_pred -eecc-------cCCCceEEEeecccccee---eecccccccccccccceeeeecccccC-Ccceeeccccccccccccc
Confidence 0000 000000111112221111 122345778899988887777766654 4577899999999877654
Q ss_pred C--CCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEE-EEEeCCCeEEEEeCCCC
Q 003907 390 Y--GNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWI-AIVSSKGTCHVFVLSPF 463 (787)
Q Consensus 390 d--G~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~L-As~S~dgTVhIwdl~~~ 463 (787)
+ ...|++||+.. + ..+..+..| ..+.+++|||||++| ++++.+++|+|||+++.
T Consensus 220 ~~~~~~v~v~D~~t-------~----------~~~~~~~~~---~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~ 276 (301)
T d1l0qa2 220 DKYFNTVSMIDTGT-------N----------KITARIPVG---PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276 (301)
T ss_dssp CSSCCEEEEEETTT-------T----------EEEEEEECC---SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cceeeeeeeeecCC-------C----------eEEEEEcCC---CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCC
Confidence 3 24699999854 2 344455433 358999999999987 57778999999999864
No 32
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.61 E-value=8.3e-14 Score=151.35 Aligned_cols=103 Identities=8% Similarity=0.042 Sum_probs=75.3
Q ss_pred cCCCceEEEEECCC-------CcEEEEeccCCCCeEEEEECCCCCEEEE-------EEcCCCEEEEEeCCCCcccCCCCC
Q 003907 345 MDNAGIVVVKDFVT-------RAIISQFKAHTSPISALCFDPSGTLLVT-------ASVYGNNINIFRIMPSCMRSGSGN 410 (787)
Q Consensus 345 ~~~dG~V~IwDl~s-------~~~v~~~~aH~~pIsaLaFSpdG~lLAT-------aS~dG~~IrVWdi~~~~~~~~~g~ 410 (787)
...++.+.+|+... .+....+.+|...+.+++|+|||++|++ ++.++ .|+|||+.. +
T Consensus 272 ~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~-tv~vwd~~t-------~- 342 (426)
T d1hzua2 272 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQ-SVAVFDLKN-------L- 342 (426)
T ss_dssp CTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHT-CEEEEETTC-------T-
T ss_pred cCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCC-EEEEEECCC-------C-
Confidence 45678999998755 3688899999999999999999999994 44444 599999864 2
Q ss_pred CccccCCcceEEEEEec-------ccccccEEEEEEccCCCEEEEE-----eCCCeEEEEeCCCCCC
Q 003907 411 HKYDWNSSHVHLYKLHR-------GITSATIQDICFSHYSQWIAIV-----SSKGTCHVFVLSPFGG 465 (787)
Q Consensus 411 ~~~~~~~s~~~l~~l~r-------G~~~a~I~slaFSpDg~~LAs~-----S~dgTVhIwdl~~~gg 465 (787)
...+++.. +.+...|..++|||||++|+.+ +.+++|+|||..+.+.
T Consensus 343 ---------~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~ 400 (426)
T d1hzua2 343 ---------DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL 400 (426)
T ss_dssp ---------TSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEE
T ss_pred ---------CcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeE
Confidence 11222210 1122358899999999987543 4689999999987643
No 33
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.57 E-value=2.6e-13 Score=138.63 Aligned_cols=290 Identities=11% Similarity=0.036 Sum_probs=166.1
Q ss_pred CCeEEEEEecC-cEEEEEccCCCceeEeeee-ccCcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcC
Q 003907 74 FKQVLLLGYQN-GFQVLDVEDASNFNELVSK-RDGPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRS 151 (787)
Q Consensus 74 ~~~vL~lG~~~-G~qVWdv~~~~~~~ells~-~dg~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~ 151 (787)
.++.|+++..+ .+.|||++ ++++...+.. +...+..+.+.|+. + .|++ ++..
T Consensus 7 ~~~~l~~~~~~~~v~v~D~~-t~~~~~t~~~~~~~~p~~l~~spDG-----------~--~l~v-~~~~----------- 60 (346)
T d1jmxb_ 7 GHEYMIVTNYPNNLHVVDVA-SDTVYKSCVMPDKFGPGTAMMAPDN-----------R--TAYV-LNNH----------- 60 (346)
T ss_dssp TCEEEEEEETTTEEEEEETT-TTEEEEEEECSSCCSSCEEEECTTS-----------S--EEEE-EETT-----------
T ss_pred CCcEEEEEcCCCEEEEEECC-CCCEEEEEEcCCCCCcceEEECCCC-----------C--EEEE-EECC-----------
Confidence 56788888876 49999995 4666666654 34456788888752 2 4444 3211
Q ss_pred CCCCcccCCcCCCCCCCCCCCCEEEEEECCCCeEEEEEeCCC-------cEEEEEecC--CeEEEEe-------------
Q 003907 152 HLGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHCYEHVLRFRS-------SVCMVRCSP--RIVAVGL------------- 209 (787)
Q Consensus 152 ~~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~~v~tL~f~s-------~V~sV~~s~--~~LaV~~------------- 209 (787)
.++|.+||+.+++.+.++.... .+..+.+++ +.|.++.
T Consensus 61 --------------------~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~ 120 (346)
T d1jmxb_ 61 --------------------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120 (346)
T ss_dssp --------------------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred --------------------CCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccC
Confidence 2589999999999999887543 245777776 5666543
Q ss_pred CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecC--cceecccc-CCCCCcCC
Q 003907 210 ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSN--SGRLSPQN-LTPSGVSP 284 (787)
Q Consensus 210 ~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~--~g~~s~q~-lt~~~~s~ 284 (787)
+..+.+||..+++....+..+..|. +...++.++ +.++. +.+..++. .+...... ........
T Consensus 121 ~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (346)
T d1jmxb_ 121 PPRLEVFSTADGLEAKPVRTFPMPR-----------QVYLMRAADDGSLYVA-GPDIYKMDVKTGKYTVALPLRNWNRKG 188 (346)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCS-----------SCCCEEECTTSCEEEE-SSSEEEECTTTCCEEEEECSTTCCCTT
T ss_pred cceEEEEecccceeeeEEEeeeccC-----------ceEEEEecCCCEEEEe-CCcceEEEccCCCEEEEEecCCCccce
Confidence 4568889888887665555433331 012233444 33333 22222111 11100000 00000111
Q ss_pred CcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEE
Q 003907 285 STSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQ 364 (787)
Q Consensus 285 s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~ 364 (787)
..+|.+..+.+....+ ..+...... .... ............+.+.+||+.++.....
T Consensus 189 ~~~~~~~~~~~~~~~~----------~~~~~~~~~---------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d1jmxb_ 189 YSAPDVLYFWPHQSPR----------HEFSMLYTI---------ARFK----DDKQDPATADLLYGYLSVDLKTGKTHTQ 245 (346)
T ss_dssp BCCCBCCCCCCCCCTT----------CEEEEEEEE---------EEC-----------CCCEEEEEEEEEETTTCCEEEE
T ss_pred EEeccccEEEEEecCC----------CceEeeeee---------eeec----cCceeEeeccCCceEEEEECCCCceEEE
Confidence 1122211110000000 000000000 0000 0000012334467899999998876544
Q ss_pred -eccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCC
Q 003907 365 -FKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYS 443 (787)
Q Consensus 365 -~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg 443 (787)
+..|...+..+.+++++.+++.++. + .|.+||+.. + ..+..+..| ..+.+++|||||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~v~v~d~~~-------~----------~~~~~~~~~---~~~~~va~s~DG 303 (346)
T d1jmxb_ 246 EFADLTELYFTGLRSPKDPNQIYGVL-N-RLAKYDLKQ-------R----------KLIKAANLD---HTYYCVAFDKKG 303 (346)
T ss_dssp EEEECSSCEEEEEECSSCTTEEEEEE-S-EEEEEETTT-------T----------EEEEEEECS---SCCCEEEECSSS
T ss_pred EeecccceeEEEEEeCCCCEEEEecC-C-eEEEEECCC-------C----------cEEEEEcCC---CCEEEEEEcCCC
Confidence 5678889999999999999988876 4 499999854 2 345555433 348899999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCCCc
Q 003907 444 QWIAIVSSKGTCHVFVLSPFGGD 466 (787)
Q Consensus 444 ~~LAs~S~dgTVhIwdl~~~gg~ 466 (787)
++|++++.|++|+|||+.+.+..
T Consensus 304 ~~l~v~~~d~~v~v~D~~t~~~i 326 (346)
T d1jmxb_ 304 DKLYLGGTFNDLAVFNPDTLEKV 326 (346)
T ss_dssp SCEEEESBSSEEEEEETTTTEEE
T ss_pred CEEEEEeCCCcEEEEECccCCEE
Confidence 99999999999999999875443
No 34
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.48 E-value=1.2e-12 Score=134.51 Aligned_cols=171 Identities=9% Similarity=0.014 Sum_probs=125.3
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEE-EeCC--eEEEEECCCCceeEEEEecCCcccCCCCcccccccc
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAV-GLAT--QIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGY 247 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV-~~~~--~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~ 247 (787)
+.|.+||+++++.++ +.+...|.+++|+| +.|++ +.++ .|++||+.+++.. .+..+... .
T Consensus 24 g~v~v~d~~~~~~~~-~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~~~~~~~~-------------v 88 (360)
T d1k32a3 24 GQAFIQDVSGTYVLK-VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGN-------------V 88 (360)
T ss_dssp TEEEEECTTSSBEEE-CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCS-------------E
T ss_pred CeEEEEECCCCcEEE-ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-EeeCCCce-------------E
Confidence 479999999888765 45677999999998 46665 4443 5999999988643 33333321 2
Q ss_pred ceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCC
Q 003907 248 GPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGS 325 (787)
Q Consensus 248 ~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s 325 (787)
..++++| ++|+++
T Consensus 89 ~~~~~spdg~~l~~~----------------------------------------------------------------- 103 (360)
T d1k32a3 89 FAMGVDRNGKFAVVA----------------------------------------------------------------- 103 (360)
T ss_dssp EEEEECTTSSEEEEE-----------------------------------------------------------------
T ss_pred Eeeeeccccccccee-----------------------------------------------------------------
Confidence 3344444 233332
Q ss_pred CCCcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcC---------CCEEEE
Q 003907 326 SSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVY---------GNNINI 396 (787)
Q Consensus 326 ~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~d---------G~~IrV 396 (787)
..++.+++||+.+++....+..|...+.+++|+|||++||.++.+ +..+++
T Consensus 104 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v 163 (360)
T d1k32a3 104 --------------------NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 163 (360)
T ss_dssp --------------------ETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred --------------------ccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccceee
Confidence 346789999999999999999999999999999999999976542 235889
Q ss_pred EeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q 003907 397 FRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPF 463 (787)
Q Consensus 397 Wdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~ 463 (787)
||+.. + ....+..+ ...+..++|+|||++|++++.|+++++|+....
T Consensus 164 ~d~~~-------~-----------~~~~~~~~--~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~ 210 (360)
T d1k32a3 164 YDMEG-------R-----------KIFAATTE--NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 210 (360)
T ss_dssp EETTT-------T-----------EEEECSCS--SSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred ecccc-------C-----------ceeeeccc--ccccccccccCCCCEEEEEeCCCceEccccccc
Confidence 99854 2 22333322 345788999999999999999999999997643
No 35
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.34 E-value=2.6e-10 Score=115.88 Aligned_cols=283 Identities=12% Similarity=0.075 Sum_probs=150.2
Q ss_pred eEEEEEecC-cEEEEEccCCCceeEeee--eccCcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCC
Q 003907 76 QVLLLGYQN-GFQVLDVEDASNFNELVS--KRDGPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSH 152 (787)
Q Consensus 76 ~vL~lG~~~-G~qVWdv~~~~~~~ells--~~dg~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~ 152 (787)
.|++.+..+ .++|||++..+.+ +++. .+.+.|..|++.|+. + .|++...
T Consensus 5 ~v~v~~~~~~~I~v~~~~~~~~l-~~~~~~~~~~~v~~la~spDG-----------~--~L~v~~~-------------- 56 (333)
T d1ri6a_ 5 TVYIASPESQQIHVWNLNHEGAL-TLTQVVDVPGQVQPMVVSPDK-----------R--YLYVGVR-------------- 56 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE-EEEEEEECSSCCCCEEECTTS-----------S--EEEEEET--------------
T ss_pred EEEEECCCCCcEEEEEEcCCCCe-EEEEEEcCCCCEeEEEEeCCC-----------C--EEEEEEC--------------
Confidence 466777555 5999999765543 4443 566889999999852 2 5544221
Q ss_pred CCCcccCCcCCCCCCCCCCCCEEEEEECCCCe----EEEEEeCCCcEEEEEecC--CeEEEEe--CCeEEEEECCCCcee
Q 003907 153 LGGVRDGMMDSQSGNCVNSPTAVRFYSFQSHC----YEHVLRFRSSVCMVRCSP--RIVAVGL--ATQIYCFDALTLENK 224 (787)
Q Consensus 153 ~~~~r~g~~~~~~~~~~~~p~tVrlWdlktg~----~v~tL~f~s~V~sV~~s~--~~LaV~~--~~~I~iwD~~T~e~l 224 (787)
.+++|++|++.... .+........+..|++++ ++|+++. +..|.+|+.......
T Consensus 57 ------------------~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~ 118 (333)
T d1ri6a_ 57 ------------------PEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV 118 (333)
T ss_dssp ------------------TTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE
T ss_pred ------------------CCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccce
Confidence 13689999987653 333334556677899988 6777765 347899987766544
Q ss_pred EEEEecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhh
Q 003907 225 FSVLTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHS 302 (787)
Q Consensus 225 ~tl~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~s 302 (787)
........+. ....++++| +++..+..... ....++.... .........
T Consensus 119 ~~~~~~~~~~-----------~~~~v~~s~d~~~~~~~~~~~~----~i~~~~~~~~----------~~~~~~~~~---- 169 (333)
T d1ri6a_ 119 GVVDVVEGLD-----------GCHSANISPDNRTLWVPALKQD----RICLFTVSDD----------GHLVAQDPA---- 169 (333)
T ss_dssp EEEEEECCCT-----------TBCCCEECTTSSEEEEEEGGGT----EEEEEEECTT----------SCEEEEEEE----
T ss_pred ecccccCCCc-----------cceEEEeeecceeeeccccccc----eeeEEEeccC----------Ccceeeece----
Confidence 4443222210 112356666 55554432110 0000000000 000000000
Q ss_pred hhhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCc----EEEEec------cCCCCe
Q 003907 303 KQFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRA----IISQFK------AHTSPI 372 (787)
Q Consensus 303 k~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~----~v~~~~------aH~~pI 372 (787)
. ...........+.++++..... ......+...+|+..... ....+. ......
T Consensus 170 ---------~-----~~~~~g~~p~~i~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (333)
T d1ri6a_ 170 ---------E-----VTTVEGAGPRHMVFHPNEQYAY---CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWA 232 (333)
T ss_dssp ---------E-----EECSTTCCEEEEEECTTSSEEE---EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCE
T ss_pred ---------e-----eeeecCCCccEEEEeccceeEE---eeccccCceEEEeecccccceeeeeeeeeeecCCCccccc
Confidence 0 0000000001112222221111 122344566677654321 112221 233456
Q ss_pred EEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEe-C
Q 003907 373 SALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVS-S 451 (787)
Q Consensus 373 saLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S-~ 451 (787)
..++|++||+++..+......+.+|++... +. ...+.... .+...+.+++|||||++|++++ +
T Consensus 233 ~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~------~~--------~~~~~~~~--~~~~~p~~~a~spDGk~l~va~~~ 296 (333)
T d1ri6a_ 233 ADIHITPDGRHLYACDRTASLITVFSVSED------GS--------VLSKEGFQ--PTETQPRGFNVDHSGKYLIAAGQK 296 (333)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTT------SC--------CEEEEEEE--ECSSSCCCEEECTTSSEEEEECTT
T ss_pred eeEEEecccCceeeecccCCeEEEEEEcCC------CC--------EEEEEEEe--CCCCCeeEEEEeCCCCEEEEEECC
Confidence 789999999988888776777999998542 10 01111111 1123467899999999987775 5
Q ss_pred CCeEEEEeCCCCCCc
Q 003907 452 KGTCHVFVLSPFGGD 466 (787)
Q Consensus 452 dgTVhIwdl~~~gg~ 466 (787)
+++|.||+++...|.
T Consensus 297 ~~~v~v~~id~~tG~ 311 (333)
T d1ri6a_ 297 SHHISVYEIVGEQGL 311 (333)
T ss_dssp TCEEEEEEEETTTTE
T ss_pred CCeEEEEEEECCCCc
Confidence 689999988765443
No 36
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.33 E-value=1.8e-10 Score=126.10 Aligned_cols=181 Identities=10% Similarity=-0.026 Sum_probs=125.6
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEEe-CCeEEEEECCCCceeE--EEEecCCcccCCCCcccccccc
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVGL-ATQIYCFDALTLENKF--SVLTYPVPQLAGQGAVGINVGY 247 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~~-~~~I~iwD~~T~e~l~--tl~t~p~p~~~~~~~~~~~~~~ 247 (787)
++|.|||+++++++++++....+..|+|+| ++|+++. ++.|.+||+.|++... ++.....
T Consensus 42 g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~--------------- 106 (432)
T d1qksa2 42 GQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE--------------- 106 (432)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE---------------
T ss_pred CEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCC---------------
Confidence 699999999999999999888899999998 6888765 5789999998887433 2222111
Q ss_pred ceeEEccceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCC
Q 003907 248 GPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSS 327 (787)
Q Consensus 248 ~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~ 327 (787)
+ +-++++ +.++|++..+++
T Consensus 107 -~-----~~~~~s-----------------------~~~SpDG~~l~v-------------------------------- 125 (432)
T d1qksa2 107 -A-----RSIETS-----------------------KMEGWEDKYAIA-------------------------------- 125 (432)
T ss_dssp -E-----EEEEEC-----------------------CSTTCTTTEEEE--------------------------------
T ss_pred -C-----CCeEEe-----------------------cccCCCCCEEEE--------------------------------
Confidence 1 111221 123333332211
Q ss_pred CcccCCccccccccccccCCCceEEEEECCCCcEEEEeccC-----------CCCeEEEEECCCCCEEEEEEcCCCEEEE
Q 003907 328 PVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAH-----------TSPISALCFDPSGTLLVTASVYGNNINI 396 (787)
Q Consensus 328 ~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH-----------~~pIsaLaFSpdG~lLATaS~dG~~IrV 396 (787)
.+..+++|+|||..+++++..+..| .....++.|+|+|+.++.+..+...|.+
T Consensus 126 ----------------s~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~ 189 (432)
T d1qksa2 126 ----------------GAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 189 (432)
T ss_dssp ----------------EEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred ----------------EcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEE
Confidence 2345789999999999988887654 3456689999999987666655567999
Q ss_pred EeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeC-CCeEEEEeCCCC
Q 003907 397 FRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSS-KGTCHVFVLSPF 463 (787)
Q Consensus 397 Wdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~-dgTVhIwdl~~~ 463 (787)
||... + ....+.++.-| ..+.+++|+|||+++++++. ++++.+++....
T Consensus 190 ~d~~~-------~--------~~~~~~~i~~g---~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~ 239 (432)
T d1qksa2 190 VDYTD-------L--------NNLKTTEISAE---RFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 239 (432)
T ss_dssp EETTC-------S--------SEEEEEEEECC---SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred EEccC-------C--------CcceEEEEccc---CccccceECCCCCEEEEeccccceEEEeecccc
Confidence 99753 1 01233444322 35789999999998877775 567888888753
No 37
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.28 E-value=2.7e-10 Score=123.05 Aligned_cols=250 Identities=12% Similarity=0.029 Sum_probs=135.5
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEEe-CCeEEEEECCCCceeEEEE--ecCCcccCCCCcccccccc
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVGL-ATQIYCFDALTLENKFSVL--TYPVPQLAGQGAVGINVGY 247 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~~-~~~I~iwD~~T~e~l~tl~--t~p~p~~~~~~~~~~~~~~ 247 (787)
++|+|||+++++++.+++....+..|+|+| ++|+++. ++.|++||+.|++...... ....+. + ..
T Consensus 42 g~v~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~---------~-~~ 111 (426)
T d1hzua2 42 GQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR---------S-VE 111 (426)
T ss_dssp TEEEEEETTTCSEEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE---------E-EE
T ss_pred CEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCc---------c-eE
Confidence 699999999999999999988999999998 7887765 5689999999998654432 211110 0 00
Q ss_pred ceeEEcc--ceEEEecC-CceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCC
Q 003907 248 GPMAVGP--RWLAYASN-TLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDG 324 (787)
Q Consensus 248 ~~lAlsp--r~LAyas~-~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~ 324 (787)
...+++| ++|+.+.. +. ....|+..+. .+..... +..... ....+.+++
T Consensus 112 ~s~~~spDG~~l~v~~~~~~-----~v~i~d~~~~------------~~~~~~~---------~~~~~~--~~~~~~~~~ 163 (426)
T d1hzua2 112 SSKFKGYEDRYTIAGAYWPP-----QFAIMDGETL------------EPKQIVS---------TRGMTV--DTQTYHPEP 163 (426)
T ss_dssp ECCSTTCTTTEEEEEEEESS-----EEEEEETTTC------------CEEEEEE---------CCEECS--SSCCEESCC
T ss_pred EeeeecCCCCEEEEeecCCC-----eEEEEcCCcc------------ceeEEee---------ccCCCc--cceeecCCC
Confidence 1123334 55544431 11 0111221111 0000000 000000 000000111
Q ss_pred CCCCcccCCccccccccccccCCCceEEEEECCCCcE-EEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCc
Q 003907 325 SSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAI-ISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSC 403 (787)
Q Consensus 325 s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~-v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~ 403 (787)
.......+++.+... ......+.+.+++..+... ......|...+..++|+|+|+++.++..+...+.+|+.....
T Consensus 164 ~~~~i~~s~d~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~ 240 (426)
T d1hzua2 164 RVAAIIASHEHPEFI---VNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRR 240 (426)
T ss_dssp CEEEEEECSSSSEEE---EEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTE
T ss_pred ceeEEEECCCCCEEE---EecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeeccccc
Confidence 111111122111111 1223346677777666542 223446778899999999999999999888889999875421
Q ss_pred cc-----C--------------C---------CCCC--------ccccCC-cceEEEEEecccccccEEEEEEccCCCEE
Q 003907 404 MR-----S--------------G---------SGNH--------KYDWNS-SHVHLYKLHRGITSATIQDICFSHYSQWI 446 (787)
Q Consensus 404 ~~-----~--------------~---------~g~~--------~~~~~~-s~~~l~~l~rG~~~a~I~slaFSpDg~~L 446 (787)
.. . . .+.. ...+.. ......++. | +...+..++|||||++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~-g-~~~~v~~v~~sPdg~~l 318 (426)
T d1hzua2 241 LSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-G-QGGGSLFIKTHPKSSHL 318 (426)
T ss_dssp EEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEE-C-SSSCCCCEECCTTCSEE
T ss_pred EEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEe-c-CCCceeEEEcCCCCceE
Confidence 00 0 0 0000 000000 012233332 3 23458899999999999
Q ss_pred EE-------EeCCCeEEEEeCCCCCC
Q 003907 447 AI-------VSSKGTCHVFVLSPFGG 465 (787)
Q Consensus 447 As-------~S~dgTVhIwdl~~~gg 465 (787)
++ ++.++||+|||+.....
T Consensus 319 ~v~~~~~~s~~~~~tv~vwd~~t~~~ 344 (426)
T d1hzua2 319 YVDTTFNPDARISQSVAVFDLKNLDA 344 (426)
T ss_dssp EECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEeecCCCCcccCCEEEEEECCCCCc
Confidence 95 45689999999986543
No 38
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.25 E-value=1.7e-09 Score=107.76 Aligned_cols=174 Identities=11% Similarity=0.086 Sum_probs=126.4
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEEe--CCeEEEEECCCCceeEEEEecCCcccCCCCccccccccc
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVGL--ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINVGYG 248 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~~--~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~~~~ 248 (787)
++|.+||+++++.+++++....+..|++++ ++|+++. +++|++||+.+++.+.++..+..|
T Consensus 12 ~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~--------------- 76 (301)
T d1l0qa2 12 DNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSP--------------- 76 (301)
T ss_dssp TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSE---------------
T ss_pred CEEEEEECCCCeEEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccccc---------------
Confidence 689999999999999999988899999998 5665543 468999999999988887654332
Q ss_pred eeEEccceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCCCCCCC
Q 003907 249 PMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPDGSSSP 328 (787)
Q Consensus 249 ~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~~s~~~ 328 (787)
+.+++..+. ..++
T Consensus 77 ------~~~~~~~~~---------------------------~~~~---------------------------------- 89 (301)
T d1l0qa2 77 ------QGVAVSPDG---------------------------KQVY---------------------------------- 89 (301)
T ss_dssp ------EEEEECTTS---------------------------SEEE----------------------------------
T ss_pred ------ccccccccc---------------------------cccc----------------------------------
Confidence 122332211 0000
Q ss_pred cccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCC
Q 003907 329 VSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGS 408 (787)
Q Consensus 329 ~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~ 408 (787)
.....++.+.+||..+++.+..+..+. ...+++|+|+|..++.+...+..+.+|+...
T Consensus 90 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~------- 147 (301)
T d1l0qa2 90 --------------VTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVT------- 147 (301)
T ss_dssp --------------EEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT-------
T ss_pred --------------ccccccceeeecccccceeeeeccccc-cceEEEeecCCCeeeeeeccccceeeeeccc-------
Confidence 012346788999999999888887664 5678999999999988777788899999854
Q ss_pred CCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCC-CeEEEEeCCCC
Q 003907 409 GNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSK-GTCHVFVLSPF 463 (787)
Q Consensus 409 g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~d-gTVhIwdl~~~ 463 (787)
+ ..+..+.. ...+..++|+||++++++++.+ +.+.+|+....
T Consensus 148 ~----------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (301)
T d1l0qa2 148 K----------AVINTVSV---GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (301)
T ss_dssp T----------EEEEEEEC---CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred c----------ceeeeccc---CCCceEEEeeccccceeeecccccccccccccce
Confidence 1 34444432 2347889999999998888765 56677776543
No 39
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.22 E-value=5.9e-09 Score=113.70 Aligned_cols=191 Identities=14% Similarity=0.119 Sum_probs=121.8
Q ss_pred EEEEEecCc-EEEEEccCCCceeEeeeeccCcEEEEEEecCCCCCCCCCCccccCcEEEEEEcCCCCCCCCCCCcCCCCC
Q 003907 77 VLLLGYQNG-FQVLDVEDASNFNELVSKRDGPVSFLQMQPFPVKDDGCEGFRKLHPFLLVVAGEDTNTLAPGQNRSHLGG 155 (787)
Q Consensus 77 vL~lG~~~G-~qVWdv~~~~~~~ells~~dg~V~~v~~lP~P~~~~~~d~F~~srpLLavV~~d~~~~~~~~~~~~~~~~ 155 (787)
++++-.++| +.|||.+ ++++...+..+. .|..++|.|+. + +|++.+.
T Consensus 34 ~~v~~~d~g~v~v~D~~-t~~v~~~~~~g~-~~~~v~fSpDG-----------~--~l~~~s~----------------- 81 (432)
T d1qksa2 34 FSVTLRDAGQIALIDGS-TYEIKTVLDTGY-AVHISRLSASG-----------R--YLFVIGR----------------- 81 (432)
T ss_dssp EEEEETTTTEEEEEETT-TCCEEEEEECSS-CEEEEEECTTS-----------C--EEEEEET-----------------
T ss_pred EEEEEcCCCEEEEEECC-CCcEEEEEeCCC-CeeEEEECCCC-----------C--EEEEEcC-----------------
Confidence 345555555 9999995 577777777654 58899999863 2 6665321
Q ss_pred cccCCcCCCCCCCCCCCCEEEEEECCCCe--EEEEEeCCC----cEEEEEecC--CeEEE-Ee-CCeEEEEECCCCceeE
Q 003907 156 VRDGMMDSQSGNCVNSPTAVRFYSFQSHC--YEHVLRFRS----SVCMVRCSP--RIVAV-GL-ATQIYCFDALTLENKF 225 (787)
Q Consensus 156 ~r~g~~~~~~~~~~~~p~tVrlWdlktg~--~v~tL~f~s----~V~sV~~s~--~~LaV-~~-~~~I~iwD~~T~e~l~ 225 (787)
+++|++||+++++ .+.+++-.. .+.++.+++ ++|++ +. ++.|.+||+.+++.+.
T Consensus 82 ----------------dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~ 145 (432)
T d1qksa2 82 ----------------DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK 145 (432)
T ss_dssp ----------------TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE
T ss_pred ----------------CCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcccccee
Confidence 2589999999876 455555333 334445554 56644 43 5789999999999888
Q ss_pred EEEecCCcccCCCCccccccccceeEEc--cceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhh
Q 003907 226 SVLTYPVPQLAGQGAVGINVGYGPMAVG--PRWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSK 303 (787)
Q Consensus 226 tl~t~p~p~~~~~~~~~~~~~~~~lAls--pr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk 303 (787)
++..+... ....+++ ++.+|... +|++..++
T Consensus 146 ~~~~~~~~-------------~~~~~~~~~~~~~~v~~-------------------------s~dg~~~~--------- 178 (432)
T d1qksa2 146 IQSTRGMT-------------YDEQEYHPEPRVAAILA-------------------------SHYRPEFI--------- 178 (432)
T ss_dssp EEECCEEC-------------TTTCCEESCCCEEEEEE-------------------------CSSSSEEE---------
T ss_pred eeccCCcc-------------ccceeccCCCceeEEEE-------------------------CCCCCEEE---------
Confidence 88754321 0111221 12222211 01111111
Q ss_pred hhhcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEec-cCCCCeEEEEECCCCC
Q 003907 304 QFAAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFK-AHTSPISALCFDPSGT 382 (787)
Q Consensus 304 ~la~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~-aH~~pIsaLaFSpdG~ 382 (787)
.....++.|.+||..+.+...... .+...+..++|+|||+
T Consensus 179 ---------------------------------------vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~ 219 (432)
T d1qksa2 179 ---------------------------------------VNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 219 (432)
T ss_dssp ---------------------------------------EEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred ---------------------------------------EEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCC
Confidence 112346889999998876544333 3456788999999999
Q ss_pred EEEEEEcCCCEEEEEeCCC
Q 003907 383 LLVTASVYGNNINIFRIMP 401 (787)
Q Consensus 383 lLATaS~dG~~IrVWdi~~ 401 (787)
+|++++.++..+.++|...
T Consensus 220 ~~~va~~~~~~v~v~d~~~ 238 (432)
T d1qksa2 220 YFITAANARNKLVVIDTKE 238 (432)
T ss_dssp EEEEEEGGGTEEEEEETTT
T ss_pred EEEEeccccceEEEeeccc
Confidence 9999999898999999854
No 40
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.13 E-value=1.4e-08 Score=104.29 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=70.0
Q ss_pred ccCCCceEEEEECCCCcEE--EEeccCC----------CCeEEEEECCCCCEEEEEEcCC---------CEEEEEeCCCC
Q 003907 344 DMDNAGIVVVKDFVTRAII--SQFKAHT----------SPISALCFDPSGTLLVTASVYG---------NNINIFRIMPS 402 (787)
Q Consensus 344 s~~~dG~V~IwDl~s~~~v--~~~~aH~----------~pIsaLaFSpdG~lLATaS~dG---------~~IrVWdi~~~ 402 (787)
....+|.+.+||+..++.. .....|. .....++++++|+.++.++.++ ..|.+||...
T Consensus 211 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t- 289 (355)
T d2bbkh_ 211 WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT- 289 (355)
T ss_dssp EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-
T ss_pred EecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCC-
Confidence 4467899999999877532 2222221 2334689999999888776543 3689999854
Q ss_pred cccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCC--EEEEEeCCCeEEEEeCCCCCC
Q 003907 403 CMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQ--WIAIVSSKGTCHVFVLSPFGG 465 (787)
Q Consensus 403 ~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~--~LAs~S~dgTVhIwdl~~~gg 465 (787)
+ +.+.++..+ ..+.+++|||||+ ++++++.|++|+|||+.+.+.
T Consensus 290 ------~----------~~~~~~~~~---~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~ 335 (355)
T d2bbkh_ 290 ------G----------ERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 335 (355)
T ss_dssp ------C----------CEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred ------C----------cEEEEecCC---CCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCE
Confidence 2 344444332 3478999999998 456677899999999987543
No 41
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.03 E-value=1.5e-08 Score=102.00 Aligned_cols=145 Identities=15% Similarity=0.077 Sum_probs=95.4
Q ss_pred CCEEEEEECCCCeEEEEEeCCC---cEEEEEecC--CeEEE-Ee-CCeEEEEECCCCceeEEEEecCCcccCCCCccccc
Q 003907 172 PTAVRFYSFQSHCYEHVLRFRS---SVCMVRCSP--RIVAV-GL-ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGIN 244 (787)
Q Consensus 172 p~tVrlWdlktg~~v~tL~f~s---~V~sV~~s~--~~LaV-~~-~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~ 244 (787)
+++|++||++++++++++..+. .+.+|++++ ++|+| +. ++.|++||+.|++.+.++..+..... .
T Consensus 10 d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~------~-- 81 (337)
T d1pbyb_ 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER------V-- 81 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE------E--
T ss_pred CCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccc------c--
Confidence 3699999999999999998643 578899987 56654 33 56799999999999888765322100 0
Q ss_pred cccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCC
Q 003907 245 VGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLP 322 (787)
Q Consensus 245 ~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p 322 (787)
.....++++| ++|+.+...... .
T Consensus 82 ~~~~~v~~s~dg~~l~~~~~~~~~-----~-------------------------------------------------- 106 (337)
T d1pbyb_ 82 KSLFGAALSPDGKTLAIYESPVRL-----E-------------------------------------------------- 106 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEE-----C--------------------------------------------------
T ss_pred cceeeEEEcCCCcEEEEeecCCcc-----e--------------------------------------------------
Confidence 0122356655 444443321000 0
Q ss_pred CCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCC
Q 003907 323 DGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMP 401 (787)
Q Consensus 323 ~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~ 401 (787)
.......++.+.+||..+++.+..+..+ ..+..++|+|||++|++++.+ +.+||...
T Consensus 107 ------------------~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~---~~~~d~~~ 163 (337)
T d1pbyb_ 107 ------------------LTHFEVQPTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYGLGRD---LHVMDPEA 163 (337)
T ss_dssp ------------------SSCEEECCCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEEESSS---EEEEETTT
T ss_pred ------------------eeeccccccceeeccccCCeEEEecccc-CCceEEEEcCCCCEEEEEcCC---cceeeeec
Confidence 0001124567888999988888887755 457788999999999887652 56777643
No 42
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=98.97 E-value=2.3e-07 Score=95.97 Aligned_cols=67 Identities=9% Similarity=0.093 Sum_probs=45.0
Q ss_pred CEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCE--EEEEeCCCeEEEEe
Q 003907 382 TLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQW--IAIVSSKGTCHVFV 459 (787)
Q Consensus 382 ~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~--LAs~S~dgTVhIwd 459 (787)
..+++... +..|.+||+.. + ..+..+..+ ..+.+++|||||++ +++++.|++|+|||
T Consensus 289 ~~~~~~~~-~~~v~~~d~~t-------~----------~~~~~~~~~---~~~~~~a~spDG~~~l~vt~~~d~~v~v~D 347 (373)
T d2madh_ 289 SAWKLHAA-AKEVTSVTGLV-------G----------QTSSQISLG---HDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred ceEEeecC-CCeEEEEECCC-------C----------cEEEEecCC---CCeeEEEECCCCCEEEEEEeCCCCeEEEEE
Confidence 33344444 34588999854 2 344444322 35889999999984 47889999999999
Q ss_pred CCCCCCcccc
Q 003907 460 LSPFGGDSGF 469 (787)
Q Consensus 460 l~~~gg~~~~ 469 (787)
+...+....+
T Consensus 348 ~~tg~~~~~~ 357 (373)
T d2madh_ 348 AGAGDQDQST 357 (373)
T ss_pred CCCCCEEEEE
Confidence 9875544333
No 43
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=98.93 E-value=3.7e-07 Score=91.99 Aligned_cols=186 Identities=13% Similarity=0.180 Sum_probs=116.2
Q ss_pred CEEEEEECCCC---eEEEEEeCCCcEEEEEecC--CeEEEEe--CCeEEEEECCCCceeEEEEecCCcccCCCCcccccc
Q 003907 173 TAVRFYSFQSH---CYEHVLRFRSSVCMVRCSP--RIVAVGL--ATQIYCFDALTLENKFSVLTYPVPQLAGQGAVGINV 245 (787)
Q Consensus 173 ~tVrlWdlktg---~~v~tL~f~s~V~sV~~s~--~~LaV~~--~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~~~~~~~ 245 (787)
++|++||+.+. +.+.+++....|..|+++| +.|.++. ++.|++|++.+.....++..+... +.
T Consensus 14 ~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~-----~~----- 83 (333)
T d1ri6a_ 14 QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-----PG----- 83 (333)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-----SS-----
T ss_pred CcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeeccc-----CC-----
Confidence 68999998754 4566677888999999998 5776655 468999998766544444322110 00
Q ss_pred ccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccccCCC
Q 003907 246 GYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQELLPD 323 (787)
Q Consensus 246 ~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~l~p~ 323 (787)
...-++++| ++|+.+.
T Consensus 84 ~p~~l~~spDg~~l~v~~-------------------------------------------------------------- 101 (333)
T d1ri6a_ 84 SLTHISTDHQGQFVFVGS-------------------------------------------------------------- 101 (333)
T ss_dssp CCSEEEECTTSSEEEEEE--------------------------------------------------------------
T ss_pred CceEEEEcCCCCEEeecc--------------------------------------------------------------
Confidence 001244444 3333322
Q ss_pred CCCCCcccCCccccccccccccCCCceEEEEECCCCcEEE--EeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCC
Q 003907 324 GSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIIS--QFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMP 401 (787)
Q Consensus 324 ~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~--~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~ 401 (787)
..++.|.+|+........ ....|...+.++.|+|+|+++++++..+..|.+|+...
T Consensus 102 ----------------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~ 159 (333)
T d1ri6a_ 102 ----------------------YNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 159 (333)
T ss_dssp ----------------------TTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ----------------------cCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEecc
Confidence 124456666665544332 33456677889999999999999998888899999754
Q ss_pred CcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEe-CCCeEEEEeCCCCCC
Q 003907 402 SCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVS-SKGTCHVFVLSPFGG 465 (787)
Q Consensus 402 ~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S-~dgTVhIwdl~~~gg 465 (787)
. +. ...................++|++++.++.... ..++..+|++.....
T Consensus 160 ~------~~-------~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 211 (333)
T d1ri6a_ 160 D------GH-------LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG 211 (333)
T ss_dssp T------SC-------EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS
T ss_pred C------Cc-------ceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeeccccc
Confidence 2 10 000111111111223478999999999887665 556788998765443
No 44
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=98.65 E-value=8.8e-08 Score=96.63 Aligned_cols=105 Identities=7% Similarity=-0.030 Sum_probs=77.8
Q ss_pred ccccCCCceEEEEECCCCcEEEEec-cCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcce
Q 003907 342 GADMDNAGIVVVKDFVTRAIISQFK-AHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHV 420 (787)
Q Consensus 342 ~~s~~~dG~V~IwDl~s~~~v~~~~-aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~ 420 (787)
++.+..++.|.|||+.+++++.+++ .|...+.+|+|+|||++|+.++..+..|.+||+.. + .
T Consensus 11 l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t-------~----------~ 73 (346)
T d1jmxb_ 11 MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-------C----------K 73 (346)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-------T----------E
T ss_pred EEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCcc-------C----------e
Confidence 4567789999999999999999987 56667889999999998866655566799999864 2 3
Q ss_pred EEEEEeccccc----ccEEEEEEccCCCEEEEEeC------------CCeEEEEeCCCC
Q 003907 421 HLYKLHRGITS----ATIQDICFSHYSQWIAIVSS------------KGTCHVFVLSPF 463 (787)
Q Consensus 421 ~l~~l~rG~~~----a~I~slaFSpDg~~LAs~S~------------dgTVhIwdl~~~ 463 (787)
.+..+..+... ..+..++|||||++|++++. ++.+.+|+....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~ 132 (346)
T d1jmxb_ 74 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 132 (346)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred eeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccc
Confidence 44444332211 12567999999999988864 566777776543
No 45
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.62 E-value=1.6e-06 Score=90.45 Aligned_cols=57 Identities=5% Similarity=-0.038 Sum_probs=44.4
Q ss_pred CEEEEEECCCCeEEEEEeCCC--------cEEEEEecC--CeEEEEe--CCeEEEEECCCCceeEEEEe
Q 003907 173 TAVRFYSFQSHCYEHVLRFRS--------SVCMVRCSP--RIVAVGL--ATQIYCFDALTLENKFSVLT 229 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s--------~V~sV~~s~--~~LaV~~--~~~I~iwD~~T~e~l~tl~t 229 (787)
.+|++||..+++.+..+..+. ....+.+++ ++|+++. .+.|.+||+.+++....+..
T Consensus 96 ~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~ 164 (368)
T d1mdah_ 96 DYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKS 164 (368)
T ss_dssp EEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEEC
T ss_pred CeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeec
Confidence 689999999999999887432 123577776 6777764 46899999999998887765
No 46
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=98.51 E-value=1.8e-06 Score=88.95 Aligned_cols=98 Identities=12% Similarity=-0.026 Sum_probs=69.2
Q ss_pred CCCceEEEEECCCCcEEEEeccCCCCeE-------EEEECCCCCEEEEEEcC-CCEEEEEeCCCCcccCCCCCCccccCC
Q 003907 346 DNAGIVVVKDFVTRAIISQFKAHTSPIS-------ALCFDPSGTLLVTASVY-GNNINIFRIMPSCMRSGSGNHKYDWNS 417 (787)
Q Consensus 346 ~~dG~V~IwDl~s~~~v~~~~aH~~pIs-------aLaFSpdG~lLATaS~d-G~~IrVWdi~~~~~~~~~g~~~~~~~~ 417 (787)
..++.|.|||+.+++.+..+..|..+.. .+.|+++|+.++....+ +..+.+|+... +
T Consensus 94 ~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~-------~-------- 158 (373)
T d2madh_ 94 KRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGG-------S-------- 158 (373)
T ss_pred ccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccC-------C--------
Confidence 4578999999999999999887766553 46788888877665532 34577777643 1
Q ss_pred cceEEEEEecccccccEEEEEEccCCCEE-EEEeCCCeEEEEeCCCCCCc
Q 003907 418 SHVHLYKLHRGITSATIQDICFSHYSQWI-AIVSSKGTCHVFVLSPFGGD 466 (787)
Q Consensus 418 s~~~l~~l~rG~~~a~I~slaFSpDg~~L-As~S~dgTVhIwdl~~~gg~ 466 (787)
..+... ....++.|+|||+.+ ++.+.|+++.+|+.......
T Consensus 159 --~~~~~~------~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~ 200 (373)
T d2madh_ 159 --SDDQLL------SSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAG 200 (373)
T ss_pred --eEEEEe------ccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceee
Confidence 111111 235689999999765 67889999999998765443
No 47
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.51 E-value=3.4e-06 Score=85.82 Aligned_cols=179 Identities=14% Similarity=0.040 Sum_probs=111.8
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEEe-----------CCeEEEEECCCCceeEEEEecCCcccCCCC
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVGL-----------ATQIYCFDALTLENKFSVLTYPVPQLAGQG 239 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~~-----------~~~I~iwD~~T~e~l~tl~t~p~p~~~~~~ 239 (787)
++|.+||.++++.+.++.... +..+++++ +.|+++. ++.|.+||+.+++.+.++..+..+..
T Consensus 28 ~~v~v~D~~tg~~~~~~~~g~-~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~---- 102 (355)
T d2bbkh_ 28 TQQFVIDGEAGRVIGMIDGGF-LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRF---- 102 (355)
T ss_dssp EEEEEEETTTTEEEEEEEECS-SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC----
T ss_pred CeEEEEECCCCcEEEEEECCC-CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCccee----
Confidence 589999999999999987432 22678887 6666543 35799999999998888876443210
Q ss_pred ccccccccceeEEccceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhhhcccceeecccccc
Q 003907 240 AVGINVGYGPMAVGPRWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQFAAGLSKTLSKYCQE 319 (787)
Q Consensus 240 ~~~~~~~~~~lAlspr~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~la~G~~ktls~~~~~ 319 (787)
.....|..+++..+. ..+.
T Consensus 103 ---------~~~~~~~~~~~s~dg---------------------------~~~~------------------------- 121 (355)
T d2bbkh_ 103 ---------LVGTYPWMTSLTPDG---------------------------KTLL------------------------- 121 (355)
T ss_dssp ---------CBSCCGGGEEECTTS---------------------------SEEE-------------------------
T ss_pred ---------ecCCCCceEEEecCC---------------------------CeeE-------------------------
Confidence 000112223333221 1000
Q ss_pred cCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCC-------CeEEEEECCCCCEEEEEEcCCC
Q 003907 320 LLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTS-------PISALCFDPSGTLLVTASVYGN 392 (787)
Q Consensus 320 l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~-------pIsaLaFSpdG~lLATaS~dG~ 392 (787)
......+..+.+||..+++.+..+..+.. +...++|++||+.++....++.
T Consensus 122 ----------------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~ 179 (355)
T d2bbkh_ 122 ----------------------FYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEG 179 (355)
T ss_dssp ----------------------EEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSS
T ss_pred ----------------------EecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCC
Confidence 00112345678888888888877765432 3345677777777766655555
Q ss_pred EEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q 003907 393 NINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPF 463 (787)
Q Consensus 393 ~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~ 463 (787)
.+.+++..... .+ ....+...+|++++..++.++.++++++|++...
T Consensus 180 ~~~~~~~~~~~-----------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 226 (355)
T d2bbkh_ 180 TPEITHTEVFH-----------------------PE-DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG 226 (355)
T ss_dssp CCEEEECCCCS-----------------------CT-TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTS
T ss_pred eEEEEeccccc-----------------------ce-ecceeeeccccCCCCeEEEecCCCeEEEEecCCC
Confidence 55565543210 00 1122455778889999999999999999998753
No 48
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=98.32 E-value=2.1e-06 Score=92.75 Aligned_cols=107 Identities=12% Similarity=0.065 Sum_probs=67.4
Q ss_pred CCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEe
Q 003907 347 NAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLH 426 (787)
Q Consensus 347 ~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~ 426 (787)
.+|.+.|||+.+++ +..+..|...+..++|||||++||..+. ..+.+|++......... ........+.-.
T Consensus 90 ~~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~~~--~~l~~~~~~~g~~~~~t------~~~~~~~~~~g~ 160 (470)
T d2bgra1 90 YTASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYVWN--NDIYVKIEPNLPSYRIT------WTGKEDIIYNGI 160 (470)
T ss_dssp EEEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEEET--TEEEEESSTTSCCEECC------SCCBTTTEEESB
T ss_pred cCceEEEEECCCCc-ccccccCCccccccccccCcceeeEeec--ccceEEECCCCceeeee------eccCCCcccccc
Confidence 35789999999887 5668889999999999999999999764 45899987532100000 000000000000
Q ss_pred cc-----cccccEEEEEEccCCCEEEEEeCCCe-EEEEeCCC
Q 003907 427 RG-----ITSATIQDICFSHYSQWIAIVSSKGT-CHVFVLSP 462 (787)
Q Consensus 427 rG-----~~~a~I~slaFSpDg~~LAs~S~dgT-VhIwdl~~ 462 (787)
.. ........+.|||||++||....|.+ +..|.+..
T Consensus 161 ~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~ 202 (470)
T d2bgra1 161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSF 202 (470)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEE
T ss_pred cceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEe
Confidence 00 00012345789999999999987765 66666543
No 49
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=98.19 E-value=7.3e-05 Score=81.51 Aligned_cols=223 Identities=9% Similarity=0.080 Sum_probs=129.7
Q ss_pred CCEEEEEECCCCeEEEEEeCC--CcEEEEEecC--C--eEEEEeCCeE------------------EEEECCCCceeEEE
Q 003907 172 PTAVRFYSFQSHCYEHVLRFR--SSVCMVRCSP--R--IVAVGLATQI------------------YCFDALTLENKFSV 227 (787)
Q Consensus 172 p~tVrlWdlktg~~v~tL~f~--s~V~sV~~s~--~--~LaV~~~~~I------------------~iwD~~T~e~l~tl 227 (787)
.++|.++|+++++....++.+ ..+..+++++ + +++...+..+ ..+|..+++..+++
T Consensus 93 ~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI 172 (441)
T d1qnia2 93 NTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV 172 (441)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence 469999999999998888765 5789999986 4 3443444433 55899999988888
Q ss_pred EecCCcccCCCCccccccccceeEEcc--ceEEEecCCceecCcceeccccCCCCCcCCCcCCCCCceeEeeehhhhhhh
Q 003907 228 LTYPVPQLAGQGAVGINVGYGPMAVGP--RWLAYASNTLLLSNSGRLSPQNLTPSGVSPSTSPGGSSLVARYAMEHSKQF 305 (787)
Q Consensus 228 ~t~p~p~~~~~~~~~~~~~~~~lAlsp--r~LAyas~~~~l~~~g~~s~q~lt~~~~s~s~sp~~g~lva~~a~d~sk~l 305 (787)
....+| ..++++| +|+..+.... +.. ...+..+.... ..+ .-......
T Consensus 173 ~v~~~p--------------~~v~~spdGk~a~vt~~ns---e~~-~~id~~t~~~~--------d~i-~v~n~p~~--- 222 (441)
T d1qnia2 173 IVDGNL--------------DNTDADYTGKYATSTCYNS---ERA-VDLAGTMRNDR--------DWV-VVFNVERI--- 222 (441)
T ss_dssp EESSCC--------------CCEEECSSSSEEEEEESCT---TCC-SSHHHHTCSSB--------CEE-EEEEHHHH---
T ss_pred ecCCCc--------------cceEECCCCCEEEEEecCC---Cce-EEEeccCcceE--------EEE-EeCCccce---
Confidence 754443 3477777 6766554321 000 00000000000 000 00000000
Q ss_pred hcccceeecccccccCCCCCCCCcccCCccccccccccccCCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEE
Q 003907 306 AAGLSKTLSKYCQELLPDGSSSPVSPNSVWKVGRHAGADMDNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLV 385 (787)
Q Consensus 306 a~G~~ktls~~~~~l~p~~s~~~~s~s~~~~~~~~~~~s~~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLA 385 (787)
-...+++ +.. ....++.+.|++....+.+..++.+.+| ..++++|||++++
T Consensus 223 ------------~~~~~dG-----------k~~-----~v~~~~v~vvd~~~~~~v~~~IPvgksP-hGv~vSPDGkyl~ 273 (441)
T d1qnia2 223 ------------AAAVKAG-----------NFK-----TIGDSKVPVVDGRGESEFTRYIPVPKNP-HGLNTSPDGKYFI 273 (441)
T ss_dssp ------------HHHHHTT-----------CCB-----CCTTCCCCEEECSSSCSSEEEECCBSSC-CCEEECTTSCEEE
T ss_pred ------------EEEecCC-----------CEE-----EeCCCCcEEEEcccCCceEEEEeCCCCc-cCceECCCCCEEE
Confidence 0011111 111 1123577888888888888899888776 5689999999988
Q ss_pred EEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCC
Q 003907 386 TASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLS 461 (787)
Q Consensus 386 TaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~ 461 (787)
.++..+.+|.|||+...... ..+. .+... ....+..-|. -....+|+++|+.+.+...|.+|..|++.
T Consensus 274 ~~~~~~~tvsv~d~~k~~~~-~~~~--~~~~~--~~~~~~~~gl---gplh~~fd~~g~~yts~~~ds~v~kw~~~ 341 (441)
T d1qnia2 274 ANGKLSPTVSVIAIDKLDDL-FEDK--IELRD--TIVAEPELGL---GPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341 (441)
T ss_dssp EECTTSSBEEEEEGGGHHHH-TTTS--SCGGG--GEEECCBCCS---CEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred EeCCcCCcEEEEEeehhhhH-hhcc--CCcce--EEEeeccccc---CcccceecCCceEEEcccccceEEEeccc
Confidence 77776777999998541100 0000 00000 0111111111 13457899999999999999999999985
No 50
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=98.03 E-value=0.00078 Score=70.58 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=48.7
Q ss_pred CeEEEEECCCCCEEEEEEcCCC-----EEEEEeCCCCcccCCCCCCccccCCcceEEEEEeccc-ccccEEEEEEcc-CC
Q 003907 371 PISALCFDPSGTLLVTASVYGN-----NINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGI-TSATIQDICFSH-YS 443 (787)
Q Consensus 371 pIsaLaFSpdG~lLATaS~dG~-----~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~-~~a~I~slaFSp-Dg 443 (787)
....|.|+|||++|+++..... .|-+|++... +. ......+..-. ....-.+++|+| ||
T Consensus 256 ~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~------g~--------~~~~~~~~~~~~~G~~p~~i~~~p~~G 321 (365)
T d1jofa_ 256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC------GS--------IEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT------SC--------EEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred CccceEECCCCCEEEEEcccCCCccceEEEEEEecCC------Cc--------eeeEeEeeEEEcCCCCccEEEecCCCC
Confidence 4567899999999988754111 2667776431 10 01111111111 112356799998 89
Q ss_pred CEEEEEe-CCCeEEEEeCCCC
Q 003907 444 QWIAIVS-SKGTCHVFVLSPF 463 (787)
Q Consensus 444 ~~LAs~S-~dgTVhIwdl~~~ 463 (787)
+||+++. .+++|.||+++..
T Consensus 322 ~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 322 EWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TEEEEECSSSCEEEEEEEETT
T ss_pred CEEEEEeCCCCeEEEEEEeCC
Confidence 9887775 6799999998754
No 51
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.96 E-value=1.7e-05 Score=82.45 Aligned_cols=99 Identities=8% Similarity=-0.034 Sum_probs=71.8
Q ss_pred CCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcC---------CCEEEEEeCCCCcccCCCCCCccccCC
Q 003907 347 NAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVY---------GNNINIFRIMPSCMRSGSGNHKYDWNS 417 (787)
Q Consensus 347 ~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~d---------G~~IrVWdi~~~~~~~~~g~~~~~~~~ 417 (787)
.+..|.+||..+++.+.++..|..+ .++|+|||+.|+.++.. +..|++||..+ +
T Consensus 44 g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t-------~-------- 106 (368)
T d1mdah_ 44 GTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT-------F-------- 106 (368)
T ss_dssp SSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT-------C--------
T ss_pred CcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCC-------C--------
Confidence 3456778899999999999888766 58999999999987631 23499999854 2
Q ss_pred cceEEEEEec--cc---ccccEEEEEEccCCCEEEEEe-CCCeEEEEeCCCCC
Q 003907 418 SHVHLYKLHR--GI---TSATIQDICFSHYSQWIAIVS-SKGTCHVFVLSPFG 464 (787)
Q Consensus 418 s~~~l~~l~r--G~---~~a~I~slaFSpDg~~LAs~S-~dgTVhIwdl~~~g 464 (787)
..+.++.. +. .......++|||||++|++++ .++++.+||+....
T Consensus 107 --~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~ 157 (368)
T d1mdah_ 107 --LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp --CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred --cEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 34444421 10 111234689999999998886 57999999998643
No 52
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.86 E-value=1.8e-05 Score=85.13 Aligned_cols=96 Identities=14% Similarity=0.156 Sum_probs=70.5
Q ss_pred CCceEEEEECCCCcEEEEec-----cCCCCeEEEEECCCCCEEEEEEcC--------CCEEEEEeCCCCcccCCCCCCcc
Q 003907 347 NAGIVVVKDFVTRAIISQFK-----AHTSPISALCFDPSGTLLVTASVY--------GNNINIFRIMPSCMRSGSGNHKY 413 (787)
Q Consensus 347 ~dG~V~IwDl~s~~~v~~~~-----aH~~pIsaLaFSpdG~lLATaS~d--------G~~IrVWdi~~~~~~~~~g~~~~ 413 (787)
.+|.+.+||+.+++....+. .|...|.+++|||||++||.++.. ...+.|||+.. +
T Consensus 34 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~-------~---- 102 (470)
T d2bgra1 34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK-------R---- 102 (470)
T ss_dssp SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-------T----
T ss_pred cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCC-------C----
Confidence 46789999999998766554 455789999999999999998641 11367888854 2
Q ss_pred ccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q 003907 414 DWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPF 463 (787)
Q Consensus 414 ~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~ 463 (787)
.+..+.. +...+..++|||||++||... ++.+.+|++...
T Consensus 103 -------~~~~l~~--~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g 142 (470)
T d2bgra1 103 -------QLITEER--IPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (470)
T ss_dssp -------EECCSSC--CCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred -------ccccccc--CCccccccccccCcceeeEee-cccceEEECCCC
Confidence 2222221 234588999999999999965 567899987643
No 53
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=97.64 E-value=0.0014 Score=71.10 Aligned_cols=110 Identities=10% Similarity=0.009 Sum_probs=65.9
Q ss_pred ceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCE--------------EEEEeCCCCc----c-----c
Q 003907 349 GIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNN--------------INIFRIMPSC----M-----R 405 (787)
Q Consensus 349 G~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~--------------IrVWdi~~~~----~-----~ 405 (787)
+.+..+|..+.+...++.... ....++|+|||+++++++.+... |.+++..... . .
T Consensus 156 ~~~~~iD~~t~~v~~qI~v~~-~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v 234 (441)
T d1qnia2 156 TMFTAIDAETMDVAWQVIVDG-NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI 234 (441)
T ss_dssp EEEEEEETTTCSEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCC
T ss_pred ceEEeecCccceeeEEEecCC-CccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEe
Confidence 467788999999888887654 46789999999999988764322 2333311000 0 0
Q ss_pred CCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEE-EeCCCeEEEEeCCC
Q 003907 406 SGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAI-VSSKGTCHVFVLSP 462 (787)
Q Consensus 406 ~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs-~S~dgTVhIwdl~~ 462 (787)
.+.+....+.......++.+.-|. ....+++||||+++++ +..++||.|||+.+
T Consensus 235 ~~~~v~vvd~~~~~~v~~~IPvgk---sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k 289 (441)
T d1qnia2 235 GDSKVPVVDGRGESEFTRYIPVPK---NPHGLNTSPDGKYFIANGKLSPTVSVIAIDK 289 (441)
T ss_dssp TTCCCCEEECSSSCSSEEEECCBS---SCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred CCCCcEEEEcccCCceEEEEeCCC---CccCceECCCCCEEEEeCCcCCcEEEEEeeh
Confidence 001111111111112233333332 2456999999998755 56789999999975
No 54
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.53 E-value=0.027 Score=54.15 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=57.2
Q ss_pred eEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEeccc
Q 003907 350 IVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGI 429 (787)
Q Consensus 350 ~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~ 429 (787)
.|.+.++..+. ...+..+........|+|+|+.++..+.++....+|..... + ... ++..
T Consensus 152 ~i~~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~------~----------~~~-~~~~-- 211 (269)
T d2hqsa1 152 QVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA------T----------GGV-QVLS-- 211 (269)
T ss_dssp EEEEEETTSSC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT------T----------CCE-EECC--
T ss_pred eEeeeeccccc-ceeeecccccccccccccccceeEEEeecCCceeeeEeecc------c----------ccc-eEee--
Confidence 34455555443 23344455667778999999999998887766666654321 1 011 1211
Q ss_pred ccccEEEEEEccCCCEEEEEeCC---CeEEEEeCC
Q 003907 430 TSATIQDICFSHYSQWIAIVSSK---GTCHVFVLS 461 (787)
Q Consensus 430 ~~a~I~slaFSpDg~~LAs~S~d---gTVhIwdl~ 461 (787)
........+|||||++||-.+.+ ..+++++++
T Consensus 212 ~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~d 246 (269)
T d2hqsa1 212 STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 246 (269)
T ss_dssp CSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred cCccccceEECCCCCEEEEEEcCCCCcEEEEEECC
Confidence 12345778999999999876654 356777765
No 55
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.23 E-value=0.12 Score=50.92 Aligned_cols=96 Identities=16% Similarity=0.192 Sum_probs=65.5
Q ss_pred CceEEEEECCCCcEEEEec--cCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEE
Q 003907 348 AGIVVVKDFVTRAIISQFK--AHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKL 425 (787)
Q Consensus 348 dG~V~IwDl~s~~~v~~~~--aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l 425 (787)
.+.|++||.. ++.+.++. ++......|+++++|+++++-+..+..|.+|+-. | ..+..+
T Consensus 177 ~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~--------G----------~~~~~~ 237 (279)
T d1q7fa_ 177 AHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD--------G----------QLISAL 237 (279)
T ss_dssp GTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--------S----------CEEEEE
T ss_pred ccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCC--------C----------CEEEEE
Confidence 4567777753 45566663 3445567899999999888655445568999841 4 344455
Q ss_pred ecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q 003907 426 HRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPF 463 (787)
Q Consensus 426 ~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~ 463 (787)
..+........|++.+||+++ +++.++.|++|+....
T Consensus 238 ~~~~~~~~p~~vav~~dG~l~-V~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 238 ESKVKHAQCFDVALMDDGSVV-LASKDYRLYIYRYVQL 274 (279)
T ss_dssp EESSCCSCEEEEEEETTTEEE-EEETTTEEEEEECSCC
T ss_pred eCCCCCCCEeEEEEeCCCcEE-EEeCCCeEEEEEeeee
Confidence 433333457899999999754 5567899999998754
No 56
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=96.95 E-value=0.057 Score=55.78 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=55.2
Q ss_pred CeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEe
Q 003907 371 PISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVS 450 (787)
Q Consensus 371 pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S 450 (787)
-+.+++|+|||++|++++.....|.+|++... |. ..................++|+|||+++.+..
T Consensus 146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~------g~--------~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~ 211 (365)
T d1jofa_ 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLAS------GE--------VELVGSVDAPDPGDHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTT------SC--------EEEEEEEECSSTTCCEEEEEECTTSSEEEEEE
T ss_pred cceEEEECCCCCEEEEeeCCCCEEEEEEccCC------Cc--------eeeccceeecCCCCceEEEEECCCCceEEEec
Confidence 36789999999999999875557888886431 20 11222222211123478899999999885555
Q ss_pred -CCCeEEEEeCCCCCC
Q 003907 451 -SKGTCHVFVLSPFGG 465 (787)
Q Consensus 451 -~dgTVhIwdl~~~gg 465 (787)
.+++|.+|+++....
T Consensus 212 e~~~~V~v~~~~~~~~ 227 (365)
T d1jofa_ 212 EAGNRICEYVIDPATH 227 (365)
T ss_dssp TTTTEEEEEEECTTTC
T ss_pred cCCCEEEEEEecCCCc
Confidence 688999999986544
No 57
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=96.35 E-value=0.56 Score=46.17 Aligned_cols=63 Identities=17% Similarity=0.318 Sum_probs=39.6
Q ss_pred eEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEE---ccCCCEEEE
Q 003907 372 ISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICF---SHYSQWIAI 448 (787)
Q Consensus 372 IsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaF---SpDg~~LAs 448 (787)
...|+|+++|+++++...+++ |..|+. . |. ...+.....+. ...++++| ++|++.|.+
T Consensus 210 pdgia~d~dG~l~va~~~~~~-V~~i~p--~------G~--------~~~~~~~~~~~--~~pt~vafg~~~~D~~~Lyv 270 (302)
T d2p4oa1 210 IDDFAFDVEGNLYGATHIYNS-VVRIAP--D------RS--------TTIIAQAEQGV--IGSTAVAFGQTEGDCTAIYV 270 (302)
T ss_dssp CSSEEEBTTCCEEEECBTTCC-EEEECT--T------CC--------EEEEECGGGTC--TTEEEEEECCSTTTTTEEEE
T ss_pred CcceEECCCCCEEEEEcCCCc-EEEECC--C------CC--------EEEEEecCCCC--CCceEEEEcCCCCCCCEEEE
Confidence 456999999998887776554 555653 1 31 01222222221 24789999 789998887
Q ss_pred EeCCC
Q 003907 449 VSSKG 453 (787)
Q Consensus 449 ~S~dg 453 (787)
++..+
T Consensus 271 tt~~g 275 (302)
T d2p4oa1 271 VTNGG 275 (302)
T ss_dssp EECTT
T ss_pred ECCCC
Confidence 76653
No 58
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.16 E-value=0.73 Score=45.62 Aligned_cols=50 Identities=8% Similarity=-0.112 Sum_probs=39.9
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEEEEEecC-CeEEEEeCCeEEEEECCCCce
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVCMVRCSP-RIVAVGLATQIYCFDALTLEN 223 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~sV~~s~-~~LaV~~~~~I~iwD~~T~e~ 223 (787)
++|.-||.++++. ..+.++..+.++.+.+ ..|.++..+.|+.+|..+++.
T Consensus 40 ~~I~r~d~~~g~~-~~~~~~~~~~~i~~~~dg~l~va~~~gl~~~d~~tg~~ 90 (295)
T d2ghsa1 40 RELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVL 90 (295)
T ss_dssp TEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCE
T ss_pred CEEEEEECCCCeE-EEEECCCCcEEEEEecCCCEEEEEeCccEEeeccccee
Confidence 5899999998865 4677888888888755 566677788999999999874
No 59
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.68 E-value=1.3 Score=44.68 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=41.4
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEEEEEe-cCCeEEEEeCCeEEEEECC
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVCMVRC-SPRIVAVGLATQIYCFDAL 219 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~sV~~-s~~~LaV~~~~~I~iwD~~ 219 (787)
++++++|+.+.+.++.+.++..|.-=+| +++.|+...++.||=|++.
T Consensus 83 ~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVYHW~~~ 130 (327)
T d1utca2 83 KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSME 130 (327)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCCEEEESSSSEEEEECSSEEEEEESS
T ss_pred CeEEEEehhHhhhhceEEcCCCcEEEEecCCCEEEEEcCCceEEEccc
Confidence 5899999999999999999998755555 7799999999999999984
No 60
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.23 E-value=0.056 Score=58.03 Aligned_cols=98 Identities=13% Similarity=0.109 Sum_probs=59.2
Q ss_pred CceEEEEECCCCcEEEE--eccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEE
Q 003907 348 AGIVVVKDFVTRAIISQ--FKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKL 425 (787)
Q Consensus 348 dG~V~IwDl~s~~~v~~--~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l 425 (787)
.|...|+|+.+++.... .......+....|||||+.||-... + .|.+.+... + ......
T Consensus 90 ~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~-~-nl~~~~~~~-------~----------~~~~lt 150 (465)
T d1xfda1 90 TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-N-NIYYCAHVG-------K----------QAIRVV 150 (465)
T ss_dssp CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-T-EEEEESSSS-------S----------CCEEEE
T ss_pred cccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEec-c-eEEEEecCC-------C----------ceEEEe
Confidence 46788999988764332 2233455667899999999998875 3 466666532 1 011111
Q ss_pred eccccc----------------ccEEEEEEccCCCEEEEEeCC-CeEEEEeCCCCC
Q 003907 426 HRGITS----------------ATIQDICFSHYSQWIAIVSSK-GTCHVFVLSPFG 464 (787)
Q Consensus 426 ~rG~~~----------------a~I~slaFSpDg~~LAs~S~d-gTVhIwdl~~~g 464 (787)
..|... ..=..+-|||||++||....| ..|..|.+..++
T Consensus 151 ~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~ 206 (465)
T d1xfda1 151 STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT 206 (465)
T ss_dssp CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS
T ss_pred cccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeeccccc
Confidence 111110 001357799999999998754 446677665443
No 61
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.08 E-value=1.5 Score=41.82 Aligned_cols=94 Identities=12% Similarity=0.059 Sum_probs=53.6
Q ss_pred ceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecc
Q 003907 349 GIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRG 428 (787)
Q Consensus 349 G~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG 428 (787)
+.|..+|.............-.....|+|+++|+++++... .+.|..++.... . ..+.. ..+
T Consensus 161 ~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~-~~~i~~~~~~~~------~----------~~~~~-~~~ 222 (260)
T d1rwia_ 161 NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHN-TNQVVKLLAGST------T----------STVLP-FTG 222 (260)
T ss_dssp TEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETT-TTEEEEECTTCS------C----------CEECC-CCS
T ss_pred ccccccccccceeeeeeccccCCCccceeeeeeeeeeeecC-CCEEEEEeCCCC------e----------EEEEc-cCC
Confidence 34555555443322222234445578999999998887766 444555654210 0 11111 111
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEeCCCCC
Q 003907 429 ITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSPFG 464 (787)
Q Consensus 429 ~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~~g 464 (787)
. ....+|+|++||+.+++-..++.|. .+.+.+
T Consensus 223 ~--~~P~~i~~d~~g~l~vad~~~~rI~--~i~~~~ 254 (260)
T d1rwia_ 223 L--NTPLAVAVDSDRTVYVADRGNDRVV--KLTSLE 254 (260)
T ss_dssp C--CCEEEEEECTTCCEEEEEGGGTEEE--EECCCG
T ss_pred C--CCeEEEEEeCCCCEEEEECCCCEEE--EEeCCC
Confidence 1 2367899999999887777777555 455543
No 62
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.03 E-value=1.3 Score=41.56 Aligned_cols=50 Identities=12% Similarity=-0.050 Sum_probs=37.1
Q ss_pred EEEEEECCCCeEEEEEeCCCcEEEEEecC--CeEEEEeCC----eEEEEECCCCce
Q 003907 174 AVRFYSFQSHCYEHVLRFRSSVCMVRCSP--RIVAVGLAT----QIYCFDALTLEN 223 (787)
Q Consensus 174 tVrlWdlktg~~v~tL~f~s~V~sV~~s~--~~LaV~~~~----~I~iwD~~T~e~ 223 (787)
.|.|.|...+.....++....+.+-+++| +.||..... .+++.+..++..
T Consensus 20 ~l~i~d~dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~ 75 (269)
T d2hqsa1 20 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV 75 (269)
T ss_dssp EEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred EEEEEcCCCCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce
Confidence 68888987666666667888899999998 788865432 478888777653
No 63
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.59 E-value=0.67 Score=45.10 Aligned_cols=92 Identities=12% Similarity=0.097 Sum_probs=61.4
Q ss_pred eEEEEECCCCcEEEEec-cCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecc
Q 003907 350 IVVVKDFVTRAIISQFK-AHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRG 428 (787)
Q Consensus 350 ~V~IwDl~s~~~v~~~~-aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG 428 (787)
.|.+++. .++....+. .+......++++++|.++++... ...+.+++.. | ..+..+...
T Consensus 94 ~i~~~~~-~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~-~~~~~~~~~~--------g----------~~~~~~g~~ 153 (279)
T d1q7fa_ 94 QIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECK-VMRVIIFDQN--------G----------NVLHKFGCS 153 (279)
T ss_dssp EEEEECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETT-TTEEEEECTT--------S----------CEEEEEECT
T ss_pred ccccccc-cccceeecCCCcccccceeccccCCcEEEEeec-cceeeEeccC--------C----------ceeeccccc
Confidence 4444543 344444443 34456778999999998876655 4557777642 3 244554333
Q ss_pred cccccEEEEEEccCCCEEEEEeCCCeEEEEeCC
Q 003907 429 ITSATIQDICFSHYSQWIAIVSSKGTCHVFVLS 461 (787)
Q Consensus 429 ~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~ 461 (787)
........+++.++|+.+++....++|++|+.+
T Consensus 154 ~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~ 186 (279)
T d1q7fa_ 154 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 186 (279)
T ss_dssp TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred ccccccceeeeccceeEEeeeccccceeeeecC
Confidence 233458899999999999999999999999854
No 64
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=94.12 E-value=0.17 Score=48.12 Aligned_cols=85 Identities=9% Similarity=0.085 Sum_probs=54.4
Q ss_pred CceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcC-CC----EEEEEeCCCCcccCCCCCCccccCCcceEE
Q 003907 348 AGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVY-GN----NINIFRIMPSCMRSGSGNHKYDWNSSHVHL 422 (787)
Q Consensus 348 dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~d-G~----~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l 422 (787)
+|.|.+.|+.+++. ..|..+...+...+|||||+.||-.+.. +. .|.++++.. | ..
T Consensus 20 ~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~-------g-----------~~ 80 (281)
T d1k32a2 20 CDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN-------G-----------EI 80 (281)
T ss_dssp TTEEEEEETTTCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT-------T-----------EE
T ss_pred CCcEEEEECCCCCE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecC-------C-----------ce
Confidence 46788889998875 4677777888999999999999966432 21 244444422 1 11
Q ss_pred EEEecc-----cccccEEEEEEccCCCEEEEEeC
Q 003907 423 YKLHRG-----ITSATIQDICFSHYSQWIAIVSS 451 (787)
Q Consensus 423 ~~l~rG-----~~~a~I~slaFSpDg~~LAs~S~ 451 (787)
..+... .........+|+|||+.|+....
T Consensus 81 ~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 114 (281)
T d1k32a2 81 KRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDA 114 (281)
T ss_dssp EECCCCCEEEETTEECSEEEEECTTCCEEEEECT
T ss_pred EEeeecCCCccCccccccccccCCCCCEEEEEEc
Confidence 222110 00113567899999999987654
No 65
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=94.03 E-value=0.15 Score=50.60 Aligned_cols=98 Identities=17% Similarity=0.204 Sum_probs=64.5
Q ss_pred CCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEE
Q 003907 346 DNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKL 425 (787)
Q Consensus 346 ~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l 425 (787)
..+++|..||.... ...+......+.+|+|+|||+++++...++. +.+|+.... .+ ....+...
T Consensus 46 ~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~-~~~~~~~~~-----~~--------~~~~~~~~ 109 (302)
T d2p4oa1 46 HEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADS-IPVVSLVKS-----DG--------TVETLLTL 109 (302)
T ss_dssp TTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTS-CEEEEEECT-----TS--------CEEEEEEC
T ss_pred CCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCce-EEEEEeccc-----cc--------ceeecccc
Confidence 34667777775432 3345556678999999999999998877554 677765331 01 11222222
Q ss_pred ecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCC
Q 003907 426 HRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSP 462 (787)
Q Consensus 426 ~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~ 462 (787)
. ......++++.+||+++++.+.++.+..++...
T Consensus 110 ~---~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~ 143 (302)
T d2p4oa1 110 P---DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 143 (302)
T ss_dssp T---TCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred C---CccccceeEEccCCCEEeeccccccceeeeccC
Confidence 1 123478999999999999988888777666553
No 66
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.39 E-value=0.11 Score=55.49 Aligned_cols=97 Identities=10% Similarity=0.034 Sum_probs=62.1
Q ss_pred CCCceEEEEECCCCcEEEEeccC---CCCeEEEEECCCCCEEEEEEcCC--------CEEEEEeCCCCcccCCCCCCccc
Q 003907 346 DNAGIVVVKDFVTRAIISQFKAH---TSPISALCFDPSGTLLVTASVYG--------NNINIFRIMPSCMRSGSGNHKYD 414 (787)
Q Consensus 346 ~~dG~V~IwDl~s~~~v~~~~aH---~~pIsaLaFSpdG~lLATaS~dG--------~~IrVWdi~~~~~~~~~g~~~~~ 414 (787)
..+|.|.+||+.+++....+..+ ...+....|||||++|+.+.... ..+.|+|+.. +
T Consensus 34 ~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~-------~----- 101 (465)
T d1xfda1 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH-------G----- 101 (465)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS-------C-----
T ss_pred eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC-------C-----
Confidence 45788999999887754444432 34677889999999988775311 1366777753 2
Q ss_pred cCCcceEEEEEeccc-ccccEEEEEEccCCCEEEEEeCCCeEEEEeCC
Q 003907 415 WNSSHVHLYKLHRGI-TSATIQDICFSHYSQWIAIVSSKGTCHVFVLS 461 (787)
Q Consensus 415 ~~~s~~~l~~l~rG~-~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~ 461 (787)
....+.... ....++...|||||++||-..+ +.+.+.+..
T Consensus 102 ------~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~-~nl~~~~~~ 142 (465)
T d1xfda1 102 ------DPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV 142 (465)
T ss_dssp ------CCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred ------ceeeccCccCCccccceeeeccCCceEEEEec-ceEEEEecC
Confidence 111221111 1124666889999999998874 456666654
No 67
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=89.21 E-value=1.5 Score=43.57 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=61.9
Q ss_pred CCceEEEEECCCCcEE------EEecc-CCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcc
Q 003907 347 NAGIVVVKDFVTRAII------SQFKA-HTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSH 419 (787)
Q Consensus 347 ~dG~V~IwDl~s~~~v------~~~~a-H~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~ 419 (787)
..+.|..||+.....+ ..+.+ +......|+++.+|++.++... +..|.+||-.. +
T Consensus 196 ~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~-~g~I~~~dp~~-------g---------- 257 (314)
T d1pjxa_ 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-SSHIEVFGPDG-------G---------- 257 (314)
T ss_dssp TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-TTEEEEECTTC-------B----------
T ss_pred cccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcC-CCEEEEEeCCC-------C----------
Confidence 4567777776543222 22222 2223467999999998887665 44588888531 1
Q ss_pred eEEEEEecccccccEEEEEEccCCCEE-EEEeCCCeEEEEeCCCCCCc
Q 003907 420 VHLYKLHRGITSATIQDICFSHYSQWI-AIVSSKGTCHVFVLSPFGGD 466 (787)
Q Consensus 420 ~~l~~l~rG~~~a~I~slaFSpDg~~L-As~S~dgTVhIwdl~~~gg~ 466 (787)
..+..+.- ......+|+|.||++.| ++.+.+++|..+++...|.+
T Consensus 258 ~~~~~i~~--p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G~~ 303 (314)
T d1pjxa_ 258 QPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNGKK 303 (314)
T ss_dssp SCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCBCC
T ss_pred EEEEEEEC--CCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCChh
Confidence 11222221 11357899999999855 55567788888888766543
No 68
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=89.03 E-value=0.45 Score=44.94 Aligned_cols=69 Identities=16% Similarity=0.255 Sum_probs=43.6
Q ss_pred EECCC--CCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeCC-
Q 003907 376 CFDPS--GTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSSK- 452 (787)
Q Consensus 376 aFSpd--G~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~d- 452 (787)
..||| |+.+|-.+. |. |-+.|+.. | ....|..+ ...+...+|||||++||-.+.+
T Consensus 5 ~~sPdi~G~~v~f~~~-~d-l~~~d~~~-------g-----------~~~~Lt~~--~~~~~~p~~SPDG~~iaf~~~~~ 62 (281)
T d1k32a2 5 LLNPDIHGDRIIFVCC-DD-LWEHDLKS-------G-----------STRKIVSN--LGVINNARFFPDGRKIAIRVMRG 62 (281)
T ss_dssp CEEEEEETTEEEEEET-TE-EEEEETTT-------C-----------CEEEEECS--SSEEEEEEECTTSSEEEEEEEES
T ss_pred ccCCCCCCCEEEEEeC-Cc-EEEEECCC-------C-----------CEEEEecC--CCcccCEEECCCCCEEEEEEeeC
Confidence 45788 999998776 53 66667742 2 22344332 2457889999999999976432
Q ss_pred ---CeEEEEeCCCCCCc
Q 003907 453 ---GTCHVFVLSPFGGD 466 (787)
Q Consensus 453 ---gTVhIwdl~~~gg~ 466 (787)
....||-+...++.
T Consensus 63 ~~~~~~~i~~~~~~~g~ 79 (281)
T d1k32a2 63 SSLNTADLYFYNGENGE 79 (281)
T ss_dssp TTCCEEEEEEEETTTTE
T ss_pred CCCCceEEEEEEecCCc
Confidence 23445555554443
No 69
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=85.33 E-value=18 Score=35.17 Aligned_cols=75 Identities=9% Similarity=0.137 Sum_probs=48.1
Q ss_pred eEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEE-EEEeccc-ccccEEEEEEccCCCEEEEE
Q 003907 372 ISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHL-YKLHRGI-TSATIQDICFSHYSQWIAIV 449 (787)
Q Consensus 372 IsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l-~~l~rG~-~~a~I~slaFSpDg~~LAs~ 449 (787)
-+.|+|+|||+.|..+....+.|..||+... +.. .... ....... ....-..|++..||++.++.
T Consensus 179 pnGia~s~dg~~lyvad~~~~~I~~~d~~~~------g~~-------~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~ 245 (319)
T d2dg1a1 179 ANGIALSTDEKVLWVTETTANRLHRIALEDD------GVT-------IQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAM 245 (319)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTT------SSS-------EEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEE
T ss_pred eeeeeeccccceEEEecccCCceEEEEEcCC------Cce-------eccccceeeeccCCccceeeeeEcCCCCEEEEE
Confidence 4679999999977666655667889987532 210 0111 1110000 01125679999999988888
Q ss_pred eCCCeEEEEe
Q 003907 450 SSKGTCHVFV 459 (787)
Q Consensus 450 S~dgTVhIwd 459 (787)
...+.|.+|+
T Consensus 246 ~~~g~V~~~~ 255 (319)
T d2dg1a1 246 YGQGRVLVFN 255 (319)
T ss_dssp ETTTEEEEEC
T ss_pred cCCCEEEEEC
Confidence 8899999887
No 70
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=82.42 E-value=12 Score=37.46 Aligned_cols=196 Identities=11% Similarity=0.158 Sum_probs=105.3
Q ss_pred CceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEec
Q 003907 348 AGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHR 427 (787)
Q Consensus 348 dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~r 427 (787)
..+++|+|+.+++.+..+.-. .+|..-.|=.+. .|+--. ++.|-=|++. |. ....++++.+.
T Consensus 82 g~~LQiFnletK~klks~~~~-e~VvfWkWis~~-~L~lVT--~taVYHW~~~--------g~------s~P~k~fdR~~ 143 (327)
T d1utca2 82 GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT--DNAVYHWSME--------GE------SQPVKMFDRHS 143 (327)
T ss_dssp TTEEEEEETTTTEEEEEEECS-SCCCEEEESSSS-EEEEEC--SSEEEEEESS--------SS------CCCEEEEECCG
T ss_pred CCeEEEEehhHhhhhceEEcC-CCcEEEEecCCC-EEEEEc--CCceEEEccc--------CC------CCchhhhhhcc
Confidence 347999999999887776554 467777775443 444333 3458889983 21 11244444332
Q ss_pred ccccccEEEEEEccCCCEEEEEeC-------CCeEEEEeCCCCCCccccccccCCCCCCcccCCCCCCccccCCCCCcCC
Q 003907 428 GITSATIQDICFSHYSQWIAIVSS-------KGTCHVFVLSPFGGDSGFQTLSSQGGDPYLFPVLSLPWWCTSSGISEQQ 500 (787)
Q Consensus 428 G~~~a~I~slaFSpDg~~LAs~S~-------dgTVhIwdl~~~gg~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~s~~q~ 500 (787)
-..+..|..-.-++|.+|++..+- .|.+.||.++.. ....+.+|... +.+.
T Consensus 144 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~---------------------F~~~ 201 (327)
T d1utca2 144 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS---------------------FAQF 201 (327)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEE---------------------EEEE
T ss_pred cccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccceeee---------------------eEEE
Confidence 223346888999999999876642 256788988753 34556677421 1111
Q ss_pred cCC-CCCceeecceeeEEecCCCccccccccccccCCccccccceeeeecccCcccccccccccc-CccccEEEEcCCcc
Q 003907 501 CVL-PPPPVTLSVVSRIKYSSFGWLNTVSNASASSMGKVFVPSGAVAAVFHNSIAHSSQHVNSRT-NSLEHLLVYTPSGY 578 (787)
Q Consensus 501 ~~~-~p~~~~l~~v~~i~~~~~~w~~~v~~~~~~a~~~~~~p~~~v~~~f~~~~~~~~~~~~~~~-~~~~~LlV~s~~G~ 578 (787)
.++ .+.+..|-..+. |.. .+-.=.+-.-....++....|.. ..++|-..-+...-|+...+ ++-+=++|.|--|+
T Consensus 202 ~~~g~~~~~~lf~fa~-r~~-~~~kLhIiEig~~~~g~~~f~kk-~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~ 278 (327)
T d1utca2 202 KMEGNAEESTLFCFAV-RGQ-AGGKLHIIEVGTPPTGNQPFPKK-AVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 278 (327)
T ss_dssp CCTTCSSCEEEEEEEE-EET-TEEEEEEEECSCCCTTCCCCCCE-EEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSE
T ss_pred EcCCCCCCceEEEEEE-CCC-CCcEEEEEEcCCCccCCCCCcce-eEEEECCccccCCcEEEEEeeccCCEEEEEecCcE
Confidence 111 111222222211 111 11000000001111121123333 56788776665444432222 45566999999999
Q ss_pred EEEEeccc
Q 003907 579 VVQHELLP 586 (787)
Q Consensus 579 l~~y~l~p 586 (787)
++.|+|..
T Consensus 279 i~lyDleT 286 (327)
T d1utca2 279 IHLYDLET 286 (327)
T ss_dssp EEEEETTT
T ss_pred EEEEEccc
Confidence 99999965
No 71
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=81.79 E-value=2.4 Score=42.00 Aligned_cols=95 Identities=13% Similarity=0.046 Sum_probs=60.2
Q ss_pred eEEEEECCCCcEEE--Ee-ccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEe
Q 003907 350 IVVVKDFVTRAIIS--QF-KAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLH 426 (787)
Q Consensus 350 ~V~IwDl~s~~~v~--~~-~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~ 426 (787)
.+.+||..+++... .+ ..|..-..+.++.++|++++.++.+...+.+||.... ...++.
T Consensus 53 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~------------------~w~~~~ 114 (387)
T d1k3ia3 53 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD------------------SWIPGP 114 (387)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT------------------EEEECC
T ss_pred EEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccC------------------cccccc
Confidence 46789998875322 22 2344445567899999999999887778999997541 111110
Q ss_pred cccccccEEEEEEccCCCEEEEEeCC------CeEEEEeCCC
Q 003907 427 RGITSATIQDICFSHYSQWIAIVSSK------GTCHVFVLSP 462 (787)
Q Consensus 427 rG~~~a~I~slaFSpDg~~LAs~S~d------gTVhIwdl~~ 462 (787)
.......--..+..+||+.++.++.+ .++.+||...
T Consensus 115 ~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~ 156 (387)
T d1k3ia3 115 DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 156 (387)
T ss_dssp CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cccccccccceeeecCCceeeeccccccccccceeeeecCCC
Confidence 00000011246778899999998753 3688888765
No 72
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=79.79 E-value=5.4 Score=37.70 Aligned_cols=71 Identities=11% Similarity=0.056 Sum_probs=47.6
Q ss_pred CeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEe
Q 003907 371 PISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVS 450 (787)
Q Consensus 371 pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S 450 (787)
....|+++++|+++++... +..|..||.... ....+... .-.....|+|.++|+++++..
T Consensus 141 ~p~~i~~~~~g~~~v~~~~-~~~i~~~d~~~~------------------~~~~~~~~-~~~~p~gi~~d~~g~l~vsd~ 200 (260)
T d1rwia_ 141 DPDGVAVDNSGNVYVTDTD-NNRVVKLEAESN------------------NQVVLPFT-DITAPWGIAVDEAGTVYVTEH 200 (260)
T ss_dssp SCCEEEECTTCCEEEEEGG-GTEEEEECTTTC------------------CEEECCCS-SCCSEEEEEECTTCCEEEEET
T ss_pred CcceeeecCCCCEeeeccc-cccccccccccc------------------eeeeeecc-ccCCCccceeeeeeeeeeeec
Confidence 4478999999998877666 445888886321 11122111 112367899999999888888
Q ss_pred CCCeEEEEeCC
Q 003907 451 SKGTCHVFVLS 461 (787)
Q Consensus 451 ~dgTVhIwdl~ 461 (787)
..+.|..++..
T Consensus 201 ~~~~i~~~~~~ 211 (260)
T d1rwia_ 201 NTNQVVKLLAG 211 (260)
T ss_dssp TTTEEEEECTT
T ss_pred CCCEEEEEeCC
Confidence 88887776543
No 73
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=79.12 E-value=30 Score=33.42 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=45.6
Q ss_pred eEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEeccc----ccccEEEEEEccCCCEEE
Q 003907 372 ISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGI----TSATIQDICFSHYSQWIA 447 (787)
Q Consensus 372 IsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~----~~a~I~slaFSpDg~~LA 447 (787)
-..|+++++|++.++... +..|.+||-. | +.+.++.--. ....+.+++|.+++..|.
T Consensus 230 PdGl~vD~~G~l~Va~~~-~g~V~~~~p~--------G----------~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
T d2dg1a1 230 PDSCCIDSDDNLYVAMYG-QGRVLVFNKR--------G----------YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLI 290 (319)
T ss_dssp EEEEEEBTTCCEEEEEET-TTEEEEECTT--------S----------CEEEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred eeeeeEcCCCCEEEEEcC-CCEEEEECCC--------C----------cEEEEEeCCCcCCCcCceeeeEEEeCCCCEEE
Confidence 356999999998887766 4458888841 4 3555543111 112478999999988777
Q ss_pred EEeCC----CeEEEEeCC
Q 003907 448 IVSSK----GTCHVFVLS 461 (787)
Q Consensus 448 s~S~d----gTVhIwdl~ 461 (787)
+.+.+ +.-.||.++
T Consensus 291 ~t~~~~~~~~~g~l~~~~ 308 (319)
T d2dg1a1 291 ICSNDIEMGGGSMLYTVN 308 (319)
T ss_dssp EEEECGGGTCCEEEEEEE
T ss_pred EEcCCCCcCCceeEEEEe
Confidence 76543 334555554
No 74
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=67.51 E-value=80 Score=33.19 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=52.7
Q ss_pred CCceEEEEECCCCcEEEEeccC----CCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEE
Q 003907 347 NAGIVVVKDFVTRAIISQFKAH----TSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHL 422 (787)
Q Consensus 347 ~dG~V~IwDl~s~~~v~~~~aH----~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l 422 (787)
..|.+.-+|+.+++.+-+...- .+++. -.|.++.+++.|| .++-||.++ | +.+
T Consensus 442 ~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~-----TagglVf~G~~dg-~l~A~Da~t-------G----------e~l 498 (571)
T d2ad6a1 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLY-----TKGGLVWYATLDG-YLKALDNKD-------G----------KEL 498 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEE-----ETTTEEEEECTTS-EEEEEETTT-------C----------CEE
T ss_pred CcccEEEeccCCCceeeEcCCCCCCCcceeE-----ecCCEEEEECCCC-eEEEEECCC-------C----------cEE
Confidence 4589999999999987765421 22322 2455777788866 499999865 5 578
Q ss_pred EEEecccccccEEEEEEccCCC-EEEEEeC
Q 003907 423 YKLHRGITSATIQDICFSHYSQ-WIAIVSS 451 (787)
Q Consensus 423 ~~l~rG~~~a~I~slaFSpDg~-~LAs~S~ 451 (787)
++++-+... .-.-|.|..||+ ||++...
T Consensus 499 W~~~l~~~~-~a~P~ty~~dGkqYi~v~~g 527 (571)
T d2ad6a1 499 WNFKMPSGG-IGSPMTYSFKGKQYIGSMYG 527 (571)
T ss_dssp EEEECSSCC-CSCCEEEEETTEEEEEEEEC
T ss_pred EEEECCCCc-eecceEEEECCEEEEEEEec
Confidence 877644211 112367788994 7766654
No 75
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=66.94 E-value=13 Score=38.87 Aligned_cols=112 Identities=14% Similarity=0.143 Sum_probs=63.8
Q ss_pred CceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcC---C-----------CEEEEEeCCCCcc--cCC----
Q 003907 348 AGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVY---G-----------NNINIFRIMPSCM--RSG---- 407 (787)
Q Consensus 348 dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~d---G-----------~~IrVWdi~~~~~--~~~---- 407 (787)
.+++.++|..+.+...++..- ..+..+++++||+++++.+.+ + ..+.++++..... .++
T Consensus 172 ~~~~t~ID~~tm~V~~QV~V~-g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~e 250 (459)
T d1fwxa2 172 VNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 250 (459)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred ceEEEEEecCCceEEEEeeeC-CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEE
Confidence 457788999999888777643 346678999999999887642 1 0245555421000 000
Q ss_pred -CCCCccccCC--cceEEEEEecccccccEEEEEEccCCCEEEEEeC-CCeEEEEeCCCC
Q 003907 408 -SGNHKYDWNS--SHVHLYKLHRGITSATIQDICFSHYSQWIAIVSS-KGTCHVFVLSPF 463 (787)
Q Consensus 408 -~g~~~~~~~~--s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~-dgTVhIwdl~~~ 463 (787)
.|....+... ....+..+--+ ..-..+.+||||+++++++. +.|+-|+|+++.
T Consensus 251 ingV~VVD~~~~~~~~v~~yIPVp---KsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki 307 (459)
T d1fwxa2 251 LNGVKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 307 (459)
T ss_dssp ETTEEEEECSGG--CSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred eCCceeecccccCCcceeEEEecC---CCCCceEECCCCCEEEEeCCcCCcEEEEEehhh
Confidence 0100000000 00011111111 11346899999999988875 789999999753
No 76
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=64.79 E-value=17 Score=35.35 Aligned_cols=100 Identities=9% Similarity=0.038 Sum_probs=54.4
Q ss_pred CceEEEEECCCCcEEEEeccCCCCeEEEEECCCCC----EEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEE
Q 003907 348 AGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGT----LLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLY 423 (787)
Q Consensus 348 dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~----lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~ 423 (787)
.|.|..++.. ++..... .+-..-+.|+|+|++. .|..+......|..||+... |. .....++
T Consensus 152 ~G~v~~~~~d-g~~~~~~-~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~------g~------~~~~~~~ 217 (314)
T d1pjxa_ 152 FGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP------AK------IENKKVW 217 (314)
T ss_dssp CEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET------TE------EEEEEEE
T ss_pred CceEEEEeec-CceeEee-CCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCc------cc------cceeeEE
Confidence 4555555543 3322222 2222336789998764 45555444556778887431 20 0001111
Q ss_pred EEecccccccEEEEEEccCCCEEEEEeCCCeEEEEeCC
Q 003907 424 KLHRGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLS 461 (787)
Q Consensus 424 ~l~rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~ 461 (787)
....+........|++..||+..++....+.|.+|+-+
T Consensus 218 ~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~ 255 (314)
T d1pjxa_ 218 GHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred EEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCC
Confidence 11112122235679999999988888888888888643
No 77
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=60.65 E-value=9.1 Score=41.17 Aligned_cols=85 Identities=22% Similarity=0.369 Sum_probs=56.4
Q ss_pred CCCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEE
Q 003907 346 DNAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKL 425 (787)
Q Consensus 346 ~~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l 425 (787)
...|.+.=+|+.+++.+-+++.+. |+..=.++-.|.++..++.|| .++-||..+ | +.|+++
T Consensus 463 ~~~G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg-~l~A~Da~T-------G----------e~LW~~ 523 (582)
T d1flga_ 463 DHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDG-YFKAFDAKS-------G----------KELWKF 523 (582)
T ss_dssp SCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTS-EEEEEETTT-------C----------CEEEEE
T ss_pred CCCCeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCC-eEEEEECCC-------C----------cEeEEE
Confidence 345889999999999888876543 332212334667777788866 499999865 5 688887
Q ss_pred ecccccccEEEEEEccCC-CEEEEEe
Q 003907 426 HRGITSATIQDICFSHYS-QWIAIVS 450 (787)
Q Consensus 426 ~rG~~~a~I~slaFSpDg-~~LAs~S 450 (787)
+-+... .=.=|+|..|| +|||+.+
T Consensus 524 ~~~~~~-~~~P~ty~~~G~qYv~i~a 548 (582)
T d1flga_ 524 QTGSGI-VSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp ECSSCC-CSCCEEEEETTEEEEEEEE
T ss_pred ECCCCc-cccCEEEEECCEEEEEEEe
Confidence 643211 11226788999 5776654
No 78
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=59.88 E-value=11 Score=40.35 Aligned_cols=83 Identities=11% Similarity=0.227 Sum_probs=53.3
Q ss_pred ceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecc
Q 003907 349 GIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRG 428 (787)
Q Consensus 349 G~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG 428 (787)
|.+.-||+.+++.+-+.+... +...=..+-.|.++.+++.|| .++.||..+ | +.|++++-+
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagglVF~G~~dg-~l~A~Da~T-------G----------e~LW~~~~~ 517 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADG-RLVAYHAAT-------G----------EKLWEAPTG 517 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTS-EEEEEETTT-------C----------CEEEEEECS
T ss_pred ccEEEeCCCCCceEeeecCCC-CCCCceEEEcCCEEEEECCCC-eEEEEECCC-------C----------cEeEEEECC
Confidence 789999999999888776432 211111223567777788866 499999865 5 578887643
Q ss_pred cccccEEEEEEccCCC-EEEEEeC
Q 003907 429 ITSATIQDICFSHYSQ-WIAIVSS 451 (787)
Q Consensus 429 ~~~a~I~slaFSpDg~-~LAs~S~ 451 (787)
.... =.=+.|..||+ ||++.+.
T Consensus 518 ~~~~-~~P~ty~~~GkQYv~v~~G 540 (573)
T d1kb0a2 518 TGVV-AAPSTYMVDGRQYVSVAVG 540 (573)
T ss_dssp SCCC-SCCEEEEETTEEEEEEEEC
T ss_pred CCcc-ccCEEEEECCEEEEEEEeC
Confidence 2110 01266778995 6666554
No 79
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=54.93 E-value=38 Score=34.09 Aligned_cols=99 Identities=4% Similarity=-0.004 Sum_probs=55.9
Q ss_pred cCCCceEEEEECCCCcEEEE-eccCCCCeEEEEECCCCCEEEEEEcC---------------CCEEEEEeCCCCcccCCC
Q 003907 345 MDNAGIVVVKDFVTRAIISQ-FKAHTSPISALCFDPSGTLLVTASVY---------------GNNINIFRIMPSCMRSGS 408 (787)
Q Consensus 345 ~~~dG~V~IwDl~s~~~v~~-~~aH~~pIsaLaFSpdG~lLATaS~d---------------G~~IrVWdi~~~~~~~~~ 408 (787)
|+..-+++++|+.+++.+.. |.. .....++|.+|++.|.-...+ ...+..+.+....
T Consensus 147 G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~----- 219 (430)
T d1qfma1 147 GSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ----- 219 (430)
T ss_dssp TCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG-----
T ss_pred cCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCc-----
Confidence 44456899999999986642 321 112468999999988654432 1235555552210
Q ss_pred CCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEEeC---CCeEEEEeC
Q 003907 409 GNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIVSS---KGTCHVFVL 460 (787)
Q Consensus 409 g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~S~---dgTVhIwdl 460 (787)
.....+++. ......+..+..+.|+++|..... +.+..+|-+
T Consensus 220 --------~~d~~v~~e--~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~ 264 (430)
T d1qfma1 220 --------SEDILCAEF--PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYC 264 (430)
T ss_dssp --------GGCEEEECC--TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEE
T ss_pred --------ccccccccc--ccCCceEEeeeccCCcceeeEEeeccCCccEEEEEe
Confidence 001233321 111224667889999999876543 334555544
No 80
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=53.31 E-value=11 Score=38.37 Aligned_cols=64 Identities=14% Similarity=0.202 Sum_probs=40.6
Q ss_pred CCCCeEEEEECCCCCEEEEE-EcCC---CEEEEEeCCCCcccCCCCCCccccCCcceEEE-EEecccccccEEEEEEccC
Q 003907 368 HTSPISALCFDPSGTLLVTA-SVYG---NNINIFRIMPSCMRSGSGNHKYDWNSSHVHLY-KLHRGITSATIQDICFSHY 442 (787)
Q Consensus 368 H~~pIsaLaFSpdG~lLATa-S~dG---~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~-~l~rG~~~a~I~slaFSpD 442 (787)
+.-.+...++||||++||-+ +..| ..|+++|+.+ | ..+- .+. ......++|++|
T Consensus 123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~t-------g----------~~~~~~i~----~~~~~~~~W~~D 181 (430)
T d1qfma1 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG-------A----------KELPDVLE----RVKFSCMAWTHD 181 (430)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT-------T----------EEEEEEEE----EECSCCEEECTT
T ss_pred ccceecceEecCCCCEEEEEeccccCchheeEEeccCc-------c----------eecccccc----cccccceEEcCC
Confidence 44455677899999998844 3333 4699999965 3 2221 221 111246899999
Q ss_pred CCEEEEEeCC
Q 003907 443 SQWIAIVSSK 452 (787)
Q Consensus 443 g~~LAs~S~d 452 (787)
++.|.-...+
T Consensus 182 ~~~~~Y~~~~ 191 (430)
T d1qfma1 182 GKGMFYNAYP 191 (430)
T ss_dssp SSEEEEEECC
T ss_pred CCEEEEEEec
Confidence 9988765543
No 81
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=53.20 E-value=1.3e+02 Score=30.96 Aligned_cols=102 Identities=9% Similarity=0.032 Sum_probs=57.7
Q ss_pred EEEEECCC---CcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcc-cCCCCCCccccCCcceEEEEEe
Q 003907 351 VVVKDFVT---RAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCM-RSGSGNHKYDWNSSHVHLYKLH 426 (787)
Q Consensus 351 V~IwDl~s---~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~-~~~~g~~~~~~~~s~~~l~~l~ 426 (787)
+.+-|..+ ...+..+....+| ..+.++|||++++.++.-..++-|+|++.-.. ... . . ........+..
T Consensus 254 V~VVD~~~~~~~~v~~yIPVpKsP-HGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~-~---~--~~~~~~~~e~e 326 (459)
T d1fwxa2 254 VKVVDGRKEASSLFTRYIPIANNP-HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYE-N---A--DPRSAVVAEPE 326 (459)
T ss_dssp EEEEECSGG--CSSEEEEEEESSC-CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHS-C---C---GGGGEEECCB
T ss_pred ceeecccccCCcceeEEEecCCCC-CceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcc-c---C--CccccEEeecc
Confidence 44556543 2334445433332 35799999999999998888899999853100 000 0 0 00001111111
Q ss_pred cccccccEEEEEEccCCCEEEEEeCCCeEEEEeCCC
Q 003907 427 RGITSATIQDICFSHYSQWIAIVSSKGTCHVFVLSP 462 (787)
Q Consensus 427 rG~~~a~I~slaFSpDg~~LAs~S~dgTVhIwdl~~ 462 (787)
-|. --..-+|+.+|.-..+---|..|--|++..
T Consensus 327 lgl---gPLht~fd~~g~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 327 LGL---GPLHTAFDGRGNAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp CCS---CEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cCc---CccccccCCCceEEEEeeccceEEEEecch
Confidence 121 134578988886444445789999999853
No 82
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=52.64 E-value=20 Score=38.33 Aligned_cols=57 Identities=14% Similarity=0.058 Sum_probs=45.4
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEE--EEEecCCeEEEEe-CCeEEEEECCCCceeEEEEe
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVC--MVRCSPRIVAVGL-ATQIYCFDALTLENKFSVLT 229 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~--sV~~s~~~LaV~~-~~~I~iwD~~T~e~l~tl~t 229 (787)
+.|.=+|+.+|+.+.+.+++.++. .+.....+|.++. ++.++.||+.|+|.+++..+
T Consensus 466 G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~ 525 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEEC
Confidence 578889999999999998776654 2344556666654 66899999999999999886
No 83
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=52.30 E-value=96 Score=29.17 Aligned_cols=62 Identities=10% Similarity=0.117 Sum_probs=41.4
Q ss_pred CCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccccEEEEEEc-cCCCEEE
Q 003907 369 TSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSATIQDICFS-HYSQWIA 447 (787)
Q Consensus 369 ~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFS-pDg~~LA 447 (787)
......++++.+|++.++.-. +..|.+||-. | +.+.++.-- ...+++++|- +|.+.|.
T Consensus 198 ~g~pdG~~vD~~GnlWva~~~-~g~V~~~dp~--------G----------~~~~~i~lP--~~~~T~~~FGG~d~~~Ly 256 (295)
T d2ghsa1 198 KGGMDGSVCDAEGHIWNARWG-EGAVDRYDTD--------G----------NHIARYEVP--GKQTTCPAFIGPDASRLL 256 (295)
T ss_dssp SSEEEEEEECTTSCEEEEEET-TTEEEEECTT--------C----------CEEEEEECS--CSBEEEEEEESTTSCEEE
T ss_pred cccccceEEcCCCCEEeeeeC-CCceEEecCC--------C----------cEeeEecCC--CCceEEEEEeCCCCCEEE
Confidence 345678999999998776544 5558888841 4 355555421 1358999996 7887777
Q ss_pred EEeC
Q 003907 448 IVSS 451 (787)
Q Consensus 448 s~S~ 451 (787)
+.|.
T Consensus 257 vTta 260 (295)
T d2ghsa1 257 VTSA 260 (295)
T ss_dssp EEEB
T ss_pred EEEC
Confidence 6654
No 84
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=51.31 E-value=47 Score=33.25 Aligned_cols=159 Identities=16% Similarity=0.158 Sum_probs=0.0
Q ss_pred CCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEecccccc--cEEEEEEccCCCEEEEEeCCC--
Q 003907 378 DPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHRGITSA--TIQDICFSHYSQWIAIVSSKG-- 453 (787)
Q Consensus 378 SpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~rG~~~a--~I~slaFSpDg~~LAs~S~dg-- 453 (787)
+|+..++++...++. |.+||+. | ..+..+..|.-+. .++.+.+.-+..-|+++|.+.
T Consensus 37 ~p~~SlI~gTdK~~G-l~vYdL~--------G----------~~l~~~~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~ 97 (353)
T d1h6la_ 37 NPQNSKLITTNKKSG-LAVYSLE--------G----------KMLHSYHTGKLNNVDIRYDFPLNGKKVDIAAASNRSEG 97 (353)
T ss_dssp CGGGCEEEEEETTSC-CEEEETT--------C----------CEEEECCSSCEEEEEEEEEEEETTEEEEEEEEEECCTT
T ss_pred CcCccEEEEEcCcCC-EEEEcCC--------C----------cEEEecccCCcCccccccccccCCcceEEEEEeCCcCc
Q ss_pred --eEEEEeCCCCCCccccccccCCCCCCcccCCCCCCccccCC------------CCCcCCcC--CCCCceeecceeeEE
Q 003907 454 --TCHVFVLSPFGGDSGFQTLSSQGGDPYLFPVLSLPWWCTSS------------GISEQQCV--LPPPPVTLSVVSRIK 517 (787)
Q Consensus 454 --TVhIwdl~~~gg~~~~~~H~~~~~~~~~~~~~~~~~~~~~~------------~s~~q~~~--~~p~~~~l~~v~~i~ 517 (787)
++.+|.+....+...............+..+-.++-|..+. -...|+.+ .....+....|.++.
T Consensus 98 ~~~l~~~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~ 177 (353)
T d1h6la_ 98 KNTIEIYAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK 177 (353)
T ss_dssp TCEEEEEEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE
T ss_pred ceeEEEEEecCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC
Q ss_pred ecCCCccccccccccccCCccccccceeeeecccCccccccccccccCccccEEEEcCCccEEEEecccCCCCC
Q 003907 518 YSSFGWLNTVSNASASSMGKVFVPSGAVAAVFHNSIAHSSQHVNSRTNSLEHLLVYTPSGYVVQHELLPSIGMG 591 (787)
Q Consensus 518 ~~~~~w~~~v~~~~~~a~~~~~~p~~~v~~~f~~~~~~~~~~~~~~~~~~~~LlV~s~~G~l~~y~l~p~~g~~ 591 (787)
.++. +.|||.+ ....+|||+-.+.-++.|.++|..+.+
T Consensus 178 ~~~q-------------------~EGCVvD-----------------de~~~LyisEE~~Giw~~~a~~~~~~~ 215 (353)
T d1h6la_ 178 MNSQ-------------------TEGMAAD-----------------DEYGSLYIAEEDEAIWKFSAEPDGGSN 215 (353)
T ss_dssp CSSC-------------------EEEEEEE-----------------TTTTEEEEEETTTEEEEEESSTTSCSC
T ss_pred CCCc-------------------cceEEEe-----------------CCCCcEEEecCccceEEEEeccCCCcc
No 85
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=48.47 E-value=18 Score=38.59 Aligned_cols=57 Identities=12% Similarity=0.064 Sum_probs=44.8
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEE--EEEecCCeEEEEe-CCeEEEEECCCCceeEEEEe
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVC--MVRCSPRIVAVGL-ATQIYCFDALTLENKFSVLT 229 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~--sV~~s~~~LaV~~-~~~I~iwD~~T~e~l~tl~t 229 (787)
++|.=||+.+|+.+.+.++..+.. .+.-...+|.++. ++.+++||+.|+|.+++..+
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~ 516 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEEC
Confidence 579999999999999998765432 2444556776664 56899999999999998875
No 86
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=45.03 E-value=31 Score=36.70 Aligned_cols=57 Identities=7% Similarity=0.015 Sum_probs=43.6
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEE--EEEecCCeEEEE-eCCeEEEEECCCCceeEEEEe
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVC--MVRCSPRIVAVG-LATQIYCFDALTLENKFSVLT 229 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~--sV~~s~~~LaV~-~~~~I~iwD~~T~e~l~tl~t 229 (787)
+.|.-+|++||+.+.+..+..+.. .|.....+|.++ .++.++.||+.|+|.+++..+
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l 503 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEEC
Confidence 579999999999999887664332 223345666665 467899999999999999875
No 87
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=44.24 E-value=24 Score=37.85 Aligned_cols=84 Identities=13% Similarity=0.125 Sum_probs=52.7
Q ss_pred CceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEec
Q 003907 348 AGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLHR 427 (787)
Q Consensus 348 dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~r 427 (787)
-|.+.-||+.+++.+-+... ..++..=.++-.|.++..++.||. ++-||..+ | +.|++++-
T Consensus 452 ~G~l~A~D~~TG~~~W~~~~-~~~~~gg~lsTagglVF~G~~Dg~-l~A~Da~T-------G----------e~LW~~~~ 512 (596)
T d1w6sa_ 452 LGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGY-LKARDSDT-------G----------DLLWKFKI 512 (596)
T ss_dssp CEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSE-EEEEETTT-------C----------CEEEEEEC
T ss_pred cceEEEEeCCCCceecccCC-CCCCccceeEecCCEEEEECCCCe-EEEEECCC-------C----------cEeeEEEC
Confidence 47899999999998766432 122221122235777778888765 99999865 5 68888764
Q ss_pred ccccccEEEEEEccCCC-EEEEEeC
Q 003907 428 GITSATIQDICFSHYSQ-WIAIVSS 451 (787)
Q Consensus 428 G~~~a~I~slaFSpDg~-~LAs~S~ 451 (787)
+... .-.=|.|..||+ |||+.+.
T Consensus 513 ~~~~-~a~P~tY~~dGkQYvav~~G 536 (596)
T d1w6sa_ 513 PSGA-IGYPMTYTHKGTQYVAIYYG 536 (596)
T ss_dssp SSCC-CSCCEEEEETTEEEEEEEEC
T ss_pred CCCc-ccCCeEEEECCEEEEEEEec
Confidence 3211 112356778995 6766543
No 88
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=43.39 E-value=39 Score=35.66 Aligned_cols=87 Identities=14% Similarity=0.233 Sum_probs=55.0
Q ss_pred CCceEEEEECCCCcEEEEeccCCCCeEEEEECCCCCEEEEEEcCCCEEEEEeCCCCcccCCCCCCccccCCcceEEEEEe
Q 003907 347 NAGIVVVKDFVTRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCMRSGSGNHKYDWNSSHVHLYKLH 426 (787)
Q Consensus 347 ~dG~V~IwDl~s~~~v~~~~aH~~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~~~~~~~~g~~~~~~~~s~~~l~~l~ 426 (787)
..|.+.-+|+.+++.+-+++-- .+...=.+.-.|.++..++.|| .++-||..+ | +.|++++
T Consensus 436 ~~G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg-~l~A~Da~t-------G----------e~LW~~~ 496 (560)
T d1kv9a2 436 VSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAG-QMHAYSADK-------G----------EALWQFE 496 (560)
T ss_dssp CEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTS-EEEEEETTT-------C----------CEEEEEE
T ss_pred cccceEEEeCCCCeEeeeccCC-CCCCCceeEECCCEEEEECCCC-cEEEEECCC-------C----------cEeEEEE
Confidence 3588999999999988776532 1222112223466777788866 499999865 5 5788776
Q ss_pred cccccccEEEEEEccCCC-EEEEEeCCC
Q 003907 427 RGITSATIQDICFSHYSQ-WIAIVSSKG 453 (787)
Q Consensus 427 rG~~~a~I~slaFSpDg~-~LAs~S~dg 453 (787)
-+... .-.=++|..||+ ||++.+.-|
T Consensus 497 l~~~~-~~~P~ty~~dGkqyv~v~aG~g 523 (560)
T d1kv9a2 497 AQSGI-VAAPMTFELAGRQYVAIMAGWG 523 (560)
T ss_dssp CSSCC-CSCCEEEEETTEEEEEEEECCC
T ss_pred CCCCc-cccCEEEEECCEEEEEEEeCCC
Confidence 44211 112266778994 777665433
No 89
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=39.57 E-value=30 Score=36.62 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=44.7
Q ss_pred CCEEEEEECCCCeEEEEEeCCCcEE--EEEecCCeEEEE-eCCeEEEEECCCCceeEEEEe
Q 003907 172 PTAVRFYSFQSHCYEHVLRFRSSVC--MVRCSPRIVAVG-LATQIYCFDALTLENKFSVLT 229 (787)
Q Consensus 172 p~tVrlWdlktg~~v~tL~f~s~V~--sV~~s~~~LaV~-~~~~I~iwD~~T~e~l~tl~t 229 (787)
.+.|.-||+.+|+.+.++.+..+.. .+.-...+|.++ .++.++.||+.|+|.+++..+
T Consensus 437 ~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l 497 (560)
T d1kv9a2 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (560)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEEC
Confidence 3689999999999999998765443 233344666654 467899999999999999875
No 90
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=33.36 E-value=87 Score=30.62 Aligned_cols=32 Identities=13% Similarity=0.338 Sum_probs=26.4
Q ss_pred CCeEEEEECCCCCEEEEEEcCCCEEEEEeCCC
Q 003907 370 SPISALCFDPSGTLLVTASVYGNNINIFRIMP 401 (787)
Q Consensus 370 ~pIsaLaFSpdG~lLATaS~dG~~IrVWdi~~ 401 (787)
.--+-|+++||+++|..+..-+..|++|++..
T Consensus 206 ~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~ 237 (340)
T d1v04a_ 206 DFANGINISPDGKYVYIAELLAHKIHVYEKHA 237 (340)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CccceeEECCCCCEEEEEeCCCCeEEEEEeCC
Confidence 34688999999998888877777899999853
No 91
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=29.37 E-value=41 Score=35.91 Aligned_cols=57 Identities=14% Similarity=0.051 Sum_probs=42.7
Q ss_pred CEEEEEECCCCeEEEEEeCCCcEE--EEEecCCeEEEEe-CCeEEEEECCCCceeEEEEe
Q 003907 173 TAVRFYSFQSHCYEHVLRFRSSVC--MVRCSPRIVAVGL-ATQIYCFDALTLENKFSVLT 229 (787)
Q Consensus 173 ~tVrlWdlktg~~v~tL~f~s~V~--sV~~s~~~LaV~~-~~~I~iwD~~T~e~l~tl~t 229 (787)
+.|.=||+.+|+.+.......+++ .+.-...+|.++. ++.++.||+.|+|.+++..+
T Consensus 453 G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~ 512 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (596)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEEC
Confidence 689999999999998887554332 1122346665554 67899999999999999875
No 92
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=26.44 E-value=1.7e+02 Score=28.38 Aligned_cols=97 Identities=12% Similarity=0.081 Sum_probs=55.3
Q ss_pred CceEEEEECCCCc-EEE---Eecc-CCCCeEEEEECCCCCEEEEEEcCC--------------CEEEEEeCCCCcccCCC
Q 003907 348 AGIVVVKDFVTRA-IIS---QFKA-HTSPISALCFDPSGTLLVTASVYG--------------NNINIFRIMPSCMRSGS 408 (787)
Q Consensus 348 dG~V~IwDl~s~~-~v~---~~~a-H~~pIsaLaFSpdG~lLATaS~dG--------------~~IrVWdi~~~~~~~~~ 408 (787)
..+|.||++.... .+. ++.. .....+.|++..+|.+++|-...- ..-.||...+
T Consensus 123 ~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~------- 195 (340)
T d1v04a_ 123 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP------- 195 (340)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECS-------
T ss_pred CceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcC-------
Confidence 4577788775332 222 2221 224568999999999999842100 1123333321
Q ss_pred CCCccccCCcceEEEEEecccccccEEEEEEccCCCEEEEE-eCCCeEEEEeCCCCC
Q 003907 409 GNHKYDWNSSHVHLYKLHRGITSATIQDICFSHYSQWIAIV-SSKGTCHVFVLSPFG 464 (787)
Q Consensus 409 g~~~~~~~~s~~~l~~l~rG~~~a~I~slaFSpDg~~LAs~-S~dgTVhIwdl~~~g 464 (787)
+ ....+-.+. .--..|++|||+++|.++ +..++|++|++...+
T Consensus 196 ~-----------~~~~~~~~l--~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~ 239 (340)
T d1v04a_ 196 N-----------DVRVVAEGF--DFANGINISPDGKYVYIAELLAHKIHVYEKHANW 239 (340)
T ss_dssp S-----------CEEEEEEEE--SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred C-----------ceEEEcCCC--CccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence 1 111111121 125789999999877555 567899999997643
Done!