Query 003909
Match_columns 787
No_of_seqs 283 out of 2502
Neff 9.6
Searched_HMMs 46136
Date Thu Mar 28 14:11:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003909.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003909hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 7E-134 2E-138 1073.7 61.5 766 1-787 1-780 (972)
2 TIGR01523 ATPase-IID_K-Na pota 100.0 9E-113 2E-117 1010.0 76.5 756 2-787 5-853 (1053)
3 COG0474 MgtA Cation transport 100.0 3E-112 6E-117 996.8 70.6 714 2-787 21-742 (917)
4 KOG0204 Calcium transporting A 100.0 5E-114 1E-118 919.9 49.5 718 7-787 101-841 (1034)
5 PRK10517 magnesium-transportin 100.0 3E-111 6E-116 984.9 71.3 686 2-787 47-739 (902)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 3E-110 7E-115 992.9 75.1 729 3-787 16-786 (997)
7 TIGR01524 ATPase-IIIB_Mg magne 100.0 4E-110 9E-115 976.9 72.0 686 1-787 12-704 (867)
8 PRK15122 magnesium-transportin 100.0 8E-110 2E-114 974.7 72.8 695 1-787 24-739 (903)
9 TIGR01522 ATPase-IIA2_Ca golgi 100.0 4E-109 9E-114 975.3 74.6 713 2-787 2-720 (884)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 8E-109 2E-113 978.8 74.6 713 8-787 43-771 (941)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-104 5E-109 936.7 72.1 723 53-787 1-732 (917)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-103 4E-108 909.9 68.3 633 23-787 1-635 (755)
13 TIGR01657 P-ATPase-V P-type AT 100.0 6.8E-99 1E-103 901.9 64.9 690 21-787 137-899 (1054)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 2.3E-97 5E-102 791.3 38.2 729 3-787 38-808 (1019)
15 TIGR01652 ATPase-Plipid phosph 100.0 6.5E-89 1.4E-93 818.9 54.7 721 36-787 1-873 (1057)
16 PRK14010 potassium-transportin 100.0 1.6E-85 3.6E-90 732.3 57.5 561 55-779 28-597 (673)
17 KOG0208 Cation transport ATPas 100.0 6.8E-86 1.5E-90 714.3 47.0 707 21-787 158-950 (1140)
18 PLN03190 aminophospholipid tra 100.0 9.6E-85 2.1E-89 772.1 60.5 714 35-780 86-966 (1178)
19 PRK01122 potassium-transportin 100.0 6E-84 1.3E-88 720.5 59.4 559 55-773 29-595 (679)
20 TIGR01497 kdpB K+-transporting 100.0 1.1E-80 2.5E-85 692.2 58.8 567 55-780 28-603 (675)
21 COG2217 ZntA Cation transport 100.0 6.3E-80 1.4E-84 687.1 56.7 503 85-761 172-675 (713)
22 KOG0205 Plasma membrane H+-tra 100.0 1.4E-77 3E-82 620.6 38.5 659 5-784 19-682 (942)
23 KOG0207 Cation transport ATPas 100.0 1.5E-76 3.2E-81 642.7 40.5 534 83-774 337-873 (951)
24 PRK11033 zntA zinc/cadmium/mer 100.0 1.8E-74 3.8E-79 665.8 57.9 498 86-762 205-705 (741)
25 KOG0210 P-type ATPase [Inorgan 100.0 8.1E-75 1.8E-79 603.1 31.8 699 31-781 74-877 (1051)
26 TIGR01511 ATPase-IB1_Cu copper 100.0 6.9E-72 1.5E-76 627.7 57.6 490 86-762 53-543 (562)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 5.7E-72 1.2E-76 631.2 52.7 506 86-762 17-524 (556)
28 TIGR01494 ATPase_P-type ATPase 100.0 1.1E-71 2.5E-76 623.6 52.7 487 94-776 3-492 (499)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.4E-71 5.3E-76 621.6 51.5 485 86-762 17-503 (536)
30 PRK10671 copA copper exporting 100.0 1.9E-70 4E-75 646.4 59.4 504 87-762 285-789 (834)
31 KOG0206 P-type ATPase [General 100.0 9.4E-72 2E-76 636.5 39.3 711 32-775 28-884 (1151)
32 KOG0209 P-type ATPase [Inorgan 100.0 4.1E-68 8.8E-73 563.2 35.4 643 22-754 161-946 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 2.1E-59 4.5E-64 475.2 35.5 522 95-774 74-598 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 3.7E-35 8E-40 296.2 23.0 228 93-337 2-230 (230)
35 KOG4383 Uncharacterized conser 99.9 3E-26 6.6E-31 239.3 25.2 273 510-786 696-1125(1354)
36 PF00702 Hydrolase: haloacid d 99.8 3.7E-21 8E-26 192.6 10.9 97 580-705 115-215 (215)
37 COG4087 Soluble P-type ATPase 99.6 1.4E-15 3E-20 127.7 11.6 125 580-736 18-145 (152)
38 PRK10976 putative hydrolase; P 99.6 1.8E-14 3.8E-19 148.9 12.5 149 591-739 18-262 (266)
39 PRK15126 thiamin pyrimidine py 99.6 1.9E-14 4.1E-19 149.1 12.6 150 590-739 17-260 (272)
40 COG0561 Cof Predicted hydrolas 99.6 2.1E-14 4.5E-19 148.1 12.3 148 592-739 20-259 (264)
41 PRK10513 sugar phosphate phosp 99.6 3E-14 6.5E-19 147.6 13.1 67 673-739 196-266 (270)
42 PRK01158 phosphoglycolate phos 99.5 4.2E-14 9.1E-19 142.8 12.3 148 592-739 20-227 (230)
43 TIGR01487 SPP-like sucrose-pho 99.5 6.9E-14 1.5E-18 139.4 10.2 147 591-737 17-215 (215)
44 PLN02887 hydrolase family prot 99.5 1.8E-13 3.9E-18 152.2 13.1 67 673-739 507-577 (580)
45 PF00690 Cation_ATPase_N: Cati 99.5 1.3E-13 2.8E-18 109.0 7.6 69 4-72 1-69 (69)
46 TIGR01482 SPP-subfamily Sucros 99.5 4.6E-13 9.9E-18 134.8 13.3 148 591-738 14-222 (225)
47 PF08282 Hydrolase_3: haloacid 99.4 5.1E-13 1.1E-17 137.2 11.9 148 590-737 13-254 (254)
48 PRK10530 pyridoxal phosphate ( 99.4 5.7E-13 1.2E-17 138.3 12.2 157 580-739 11-269 (272)
49 PF13246 Hydrolase_like2: Puta 99.4 5.8E-13 1.2E-17 111.2 7.5 91 415-524 1-91 (91)
50 TIGR01486 HAD-SF-IIB-MPGP mann 99.4 6.2E-12 1.4E-16 128.8 14.0 147 593-739 17-254 (256)
51 PRK03669 mannosyl-3-phosphogly 99.3 1.3E-11 2.8E-16 127.6 13.9 157 580-739 15-266 (271)
52 TIGR00099 Cof-subfamily Cof su 99.3 5.5E-12 1.2E-16 129.5 10.8 147 591-737 15-256 (256)
53 PRK11133 serB phosphoserine ph 99.3 1.8E-11 3.9E-16 127.4 11.5 129 592-738 181-316 (322)
54 TIGR02726 phenyl_P_delta pheny 99.3 2.3E-11 4.9E-16 114.1 10.3 106 599-735 41-148 (169)
55 PRK00192 mannosyl-3-phosphogly 99.2 9.6E-11 2.1E-15 121.2 13.3 150 590-739 19-268 (273)
56 TIGR02137 HSK-PSP phosphoserin 99.2 1E-10 2.3E-15 114.0 11.2 127 592-740 68-198 (203)
57 TIGR01670 YrbI-phosphatas 3-de 99.2 8.8E-11 1.9E-15 109.6 10.1 110 600-738 36-146 (154)
58 smart00831 Cation_ATPase_N Cat 99.1 2.1E-10 4.6E-15 89.3 7.3 61 15-75 2-62 (64)
59 TIGR02471 sucr_syn_bact_C sucr 99.1 5.8E-10 1.3E-14 112.8 11.6 142 597-739 20-233 (236)
60 COG0560 SerB Phosphoserine pho 99.1 3.1E-10 6.7E-15 111.1 9.1 119 591-728 76-202 (212)
61 COG1778 Low specificity phosph 99.1 2.8E-10 6.2E-15 99.9 7.7 113 599-744 42-162 (170)
62 PRK09484 3-deoxy-D-manno-octul 98.9 3.2E-09 6.9E-14 102.3 9.7 103 599-734 55-161 (183)
63 TIGR01485 SPP_plant-cyano sucr 98.9 8.5E-09 1.9E-13 105.1 11.9 150 590-739 19-245 (249)
64 TIGR00338 serB phosphoserine p 98.9 8.2E-09 1.8E-13 103.3 10.4 126 592-736 85-218 (219)
65 PLN02382 probable sucrose-phos 98.8 2.7E-08 5.8E-13 107.9 11.5 148 592-739 28-258 (413)
66 TIGR02461 osmo_MPG_phos mannos 98.7 4.9E-08 1.1E-12 97.3 10.3 51 590-640 13-63 (225)
67 TIGR02463 MPGP_rel mannosyl-3- 98.7 2.1E-07 4.6E-12 93.1 12.4 48 593-640 17-65 (221)
68 PRK13582 thrH phosphoserine ph 98.6 1.7E-07 3.8E-12 92.6 11.0 125 592-737 68-195 (205)
69 KOG1615 Phosphoserine phosphat 98.6 8.5E-08 1.8E-12 87.5 6.4 103 592-711 88-199 (227)
70 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.6 2.3E-07 5E-12 91.5 10.1 117 592-722 80-200 (201)
71 PTZ00174 phosphomannomutase; P 98.5 6.5E-07 1.4E-11 91.0 10.7 54 672-725 187-245 (247)
72 PRK12702 mannosyl-3-phosphogly 98.5 1.4E-06 3.1E-11 87.2 11.5 51 590-640 16-66 (302)
73 PRK14502 bifunctional mannosyl 98.4 1.9E-06 4.1E-11 96.1 12.0 46 592-637 433-478 (694)
74 PRK10187 trehalose-6-phosphate 98.4 2.1E-06 4.6E-11 87.9 11.2 139 592-738 36-241 (266)
75 TIGR03333 salvage_mtnX 2-hydro 98.4 3.4E-06 7.3E-11 83.8 12.0 111 591-711 69-182 (214)
76 PLN02954 phosphoserine phospha 98.3 3.8E-06 8.2E-11 84.3 12.0 126 592-735 84-221 (224)
77 COG0546 Gph Predicted phosphat 98.3 5.3E-06 1.1E-10 82.7 10.6 126 590-737 87-217 (220)
78 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.3 3.8E-06 8.2E-11 82.8 9.5 105 590-711 85-197 (202)
79 PRK09552 mtnX 2-hydroxy-3-keto 98.3 5.2E-06 1.1E-10 82.8 10.4 109 592-710 74-185 (219)
80 PF12710 HAD: haloacid dehalog 98.2 2.6E-06 5.6E-11 83.2 7.9 92 595-702 92-192 (192)
81 PRK13222 phosphoglycolate phos 98.2 7.8E-06 1.7E-10 82.2 11.1 127 591-739 92-223 (226)
82 TIGR01488 HAD-SF-IB Haloacid D 98.2 3.7E-06 7.9E-11 81.0 7.1 97 592-704 73-177 (177)
83 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 7.5E-06 1.6E-10 79.6 8.6 114 591-709 71-186 (188)
84 TIGR01454 AHBA_synth_RP 3-amin 98.1 1.3E-05 2.8E-10 79.2 10.0 123 592-736 75-202 (205)
85 cd01427 HAD_like Haloacid deha 98.1 1.1E-05 2.4E-10 73.6 8.3 118 588-709 20-138 (139)
86 TIGR01484 HAD-SF-IIB HAD-super 98.0 2.5E-05 5.5E-10 77.0 9.4 40 591-630 16-55 (204)
87 PRK11590 hypothetical protein; 97.9 4.7E-05 1E-09 75.4 10.1 110 592-718 95-208 (211)
88 PF05116 S6PP: Sucrose-6F-phos 97.9 3E-05 6.5E-10 78.5 8.7 68 672-739 164-244 (247)
89 TIGR01449 PGP_bact 2-phosphogl 97.9 3.8E-05 8.3E-10 76.3 9.0 116 592-727 85-205 (213)
90 PRK08238 hypothetical protein; 97.9 8.2E-05 1.8E-09 82.1 12.3 98 592-715 72-169 (479)
91 PRK13223 phosphoglycolate phos 97.9 5.3E-05 1.1E-09 78.1 10.1 126 591-738 100-230 (272)
92 PRK13288 pyrophosphatase PpaX; 97.9 5.7E-05 1.2E-09 75.2 10.0 124 592-737 82-210 (214)
93 TIGR01545 YfhB_g-proteo haloac 97.9 8.3E-05 1.8E-09 73.2 10.5 111 592-717 94-206 (210)
94 PRK10826 2-deoxyglucose-6-phos 97.8 6.7E-05 1.4E-09 75.1 8.8 117 591-727 91-211 (222)
95 PLN02770 haloacid dehalogenase 97.7 0.00016 3.4E-09 73.6 10.3 119 592-730 108-230 (248)
96 TIGR01544 HAD-SF-IE haloacid d 97.7 0.00031 6.7E-09 71.0 11.8 129 591-737 120-273 (277)
97 PRK13226 phosphoglycolate phos 97.7 0.00022 4.7E-09 71.7 10.2 122 592-735 95-222 (229)
98 PRK14501 putative bifunctional 97.7 0.00026 5.7E-09 83.6 12.1 151 580-738 500-721 (726)
99 PRK13225 phosphoglycolate phos 97.7 0.00034 7.3E-09 71.9 11.3 121 592-737 142-267 (273)
100 TIGR01422 phosphonatase phosph 97.7 0.00031 6.6E-09 71.9 10.9 98 592-708 99-197 (253)
101 PLN03243 haloacid dehalogenase 97.6 0.00023 5E-09 72.6 9.4 116 592-727 109-226 (260)
102 TIGR03351 PhnX-like phosphonat 97.6 0.00029 6.3E-09 70.4 9.8 98 591-708 86-186 (220)
103 PLN02575 haloacid dehalogenase 97.5 0.00054 1.2E-08 72.7 10.2 116 592-727 216-333 (381)
104 PRK13478 phosphonoacetaldehyde 97.5 0.001 2.3E-08 68.5 12.1 96 592-706 101-197 (267)
105 PRK11009 aphA acid phosphatase 97.5 0.00037 8.1E-09 69.3 8.3 88 592-710 114-210 (237)
106 smart00775 LNS2 LNS2 domain. T 97.4 0.0011 2.5E-08 61.7 10.7 103 590-707 25-141 (157)
107 TIGR02253 CTE7 HAD superfamily 97.4 0.00043 9.4E-09 69.2 8.2 100 592-711 94-195 (221)
108 PRK11587 putative phosphatase; 97.4 0.00091 2E-08 66.6 10.0 115 592-727 83-199 (218)
109 TIGR01672 AphA HAD superfamily 97.4 0.00044 9.5E-09 68.8 7.4 91 593-710 115-210 (237)
110 COG4030 Uncharacterized protei 97.4 0.00074 1.6E-08 63.6 8.2 144 592-738 83-262 (315)
111 PRK14988 GMP/IMP nucleotidase; 97.4 0.00052 1.1E-08 68.6 7.7 103 592-714 93-197 (224)
112 TIGR01548 HAD-SF-IA-hyp1 haloa 97.3 0.00059 1.3E-08 66.8 7.9 93 591-704 105-197 (197)
113 TIGR01428 HAD_type_II 2-haloal 97.3 0.00072 1.6E-08 66.3 8.3 97 592-708 92-188 (198)
114 COG4359 Uncharacterized conser 97.3 0.00046 9.9E-09 62.9 5.9 107 592-711 73-185 (220)
115 TIGR01662 HAD-SF-IIIA HAD-supe 97.3 0.0011 2.4E-08 60.2 8.2 93 591-707 24-126 (132)
116 PRK06769 hypothetical protein; 97.2 0.0012 2.5E-08 63.0 7.7 101 592-711 28-137 (173)
117 PHA02530 pseT polynucleotide k 97.2 0.0015 3.2E-08 68.8 8.9 108 589-709 184-293 (300)
118 PLN02779 haloacid dehalogenase 97.1 0.002 4.3E-08 66.9 9.3 118 592-727 144-264 (286)
119 PRK06698 bifunctional 5'-methy 97.1 0.0023 5E-08 71.4 10.5 122 592-738 330-454 (459)
120 TIGR01685 MDP-1 magnesium-depe 97.1 0.0025 5.5E-08 60.1 8.8 114 580-710 33-155 (174)
121 PF13419 HAD_2: Haloacid dehal 97.0 0.0011 2.4E-08 63.3 5.9 98 591-708 76-173 (176)
122 PLN02423 phosphomannomutase 97.0 0.0045 9.7E-08 62.7 10.5 43 672-715 188-235 (245)
123 PRK08942 D,D-heptose 1,7-bisph 97.0 0.0057 1.2E-07 58.9 10.3 125 592-737 29-176 (181)
124 TIGR01990 bPGM beta-phosphoglu 97.0 0.0017 3.7E-08 62.8 6.7 95 592-708 87-181 (185)
125 TIGR01509 HAD-SF-IA-v3 haloaci 96.9 0.0028 6E-08 61.1 8.0 95 592-707 85-179 (183)
126 TIGR02009 PGMB-YQAB-SF beta-ph 96.9 0.0019 4.1E-08 62.5 6.7 96 591-708 87-182 (185)
127 PLN02940 riboflavin kinase 96.9 0.0029 6.4E-08 68.4 8.5 116 592-727 93-212 (382)
128 TIGR02254 YjjG/YfnB HAD superf 96.9 0.0027 5.8E-08 63.6 7.7 98 592-710 97-197 (224)
129 TIGR00213 GmhB_yaeD D,D-heptos 96.8 0.005 1.1E-07 58.9 8.6 125 592-727 26-170 (176)
130 TIGR01668 YqeG_hyp_ppase HAD s 96.8 0.0036 7.7E-08 59.5 6.9 91 592-711 43-136 (170)
131 PRK09449 dUMP phosphatase; Pro 96.7 0.005 1.1E-07 61.6 8.3 123 592-737 95-222 (224)
132 TIGR01675 plant-AP plant acid 96.7 0.009 2E-07 58.7 9.7 81 591-699 119-210 (229)
133 COG3769 Predicted hydrolase (H 96.7 0.0083 1.8E-07 56.7 8.2 37 596-632 27-63 (274)
134 TIGR01533 lipo_e_P4 5'-nucleot 96.6 0.011 2.4E-07 59.9 9.5 87 590-702 116-205 (266)
135 PLN02811 hydrolase 96.6 0.0065 1.4E-07 60.6 7.9 98 592-709 78-181 (220)
136 TIGR02252 DREG-2 REG-2-like, H 96.6 0.0054 1.2E-07 60.3 7.2 95 592-707 105-200 (203)
137 TIGR01656 Histidinol-ppas hist 96.6 0.0062 1.3E-07 56.3 7.1 100 592-708 27-141 (147)
138 TIGR01691 enolase-ppase 2,3-di 96.5 0.0093 2E-07 58.9 8.1 98 590-709 93-193 (220)
139 COG2179 Predicted hydrolase of 96.5 0.012 2.6E-07 53.5 7.6 85 591-706 45-132 (175)
140 TIGR01261 hisB_Nterm histidino 96.4 0.0071 1.5E-07 56.6 6.4 97 592-709 29-144 (161)
141 TIGR01549 HAD-SF-IA-v1 haloaci 96.4 0.0078 1.7E-07 56.2 6.6 90 593-705 65-154 (154)
142 PLN03017 trehalose-phosphatase 96.3 0.035 7.6E-07 58.5 11.3 47 579-626 118-166 (366)
143 TIGR01681 HAD-SF-IIIC HAD-supe 96.3 0.012 2.5E-07 52.9 6.7 88 592-703 29-126 (128)
144 PLN02205 alpha,alpha-trehalose 96.2 0.026 5.6E-07 67.1 11.1 50 580-629 604-654 (854)
145 PLN02919 haloacid dehalogenase 96.1 0.025 5.5E-07 69.3 10.3 127 592-738 161-292 (1057)
146 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.0 0.058 1.3E-06 55.1 11.3 48 585-632 10-64 (257)
147 TIGR01664 DNA-3'-Pase DNA 3'-p 95.9 0.024 5.2E-07 53.4 7.4 94 593-708 43-158 (166)
148 smart00577 CPDc catalytic doma 95.9 0.011 2.3E-07 54.8 4.9 97 591-710 44-140 (148)
149 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.9 0.084 1.8E-06 53.4 11.8 94 585-706 17-116 (242)
150 PF06888 Put_Phosphatase: Puta 95.7 0.047 1E-06 54.1 8.5 104 592-701 71-185 (234)
151 PRK09456 ?-D-glucose-1-phospha 95.7 0.031 6.7E-07 54.7 7.3 98 592-709 84-182 (199)
152 TIGR02247 HAD-1A3-hyp Epoxide 95.5 0.029 6.3E-07 55.5 6.4 102 591-712 93-197 (211)
153 PRK05446 imidazole glycerol-ph 95.4 0.051 1.1E-06 57.5 8.0 100 591-709 29-145 (354)
154 TIGR01686 FkbH FkbH-like domai 95.3 0.046 1E-06 57.8 7.6 93 592-711 31-129 (320)
155 TIGR00685 T6PP trehalose-phosp 95.3 0.025 5.4E-07 57.4 5.2 65 669-737 163-239 (244)
156 TIGR01457 HAD-SF-IIA-hyp2 HAD- 95.3 0.12 2.6E-06 52.5 10.1 50 585-634 10-62 (249)
157 PRK10563 6-phosphogluconate ph 95.2 0.027 5.9E-07 56.2 5.1 97 592-710 88-184 (221)
158 PHA02597 30.2 hypothetical pro 95.1 0.045 9.8E-07 53.4 6.4 100 592-713 74-176 (197)
159 PLN02645 phosphoglycolate phos 95.0 0.067 1.5E-06 56.3 7.7 48 585-632 37-87 (311)
160 PRK10725 fructose-1-P/6-phosph 94.9 0.072 1.6E-06 51.5 7.1 93 594-708 90-182 (188)
161 PLN02580 trehalose-phosphatase 94.8 0.042 9.1E-07 58.5 5.5 63 672-738 300-374 (384)
162 COG0637 Predicted phosphatase/ 94.8 0.091 2E-06 52.2 7.7 99 591-709 85-183 (221)
163 PF13344 Hydrolase_6: Haloacid 94.7 0.056 1.2E-06 46.1 5.1 49 585-633 7-58 (101)
164 TIGR01993 Pyr-5-nucltdase pyri 94.5 0.13 2.8E-06 49.6 7.8 98 592-708 84-181 (184)
165 PF09419 PGP_phosphatase: Mito 94.5 0.21 4.5E-06 46.7 8.6 92 590-711 57-164 (168)
166 PLN02177 glycerol-3-phosphate 94.0 0.25 5.3E-06 55.1 9.5 100 593-712 111-215 (497)
167 PF03767 Acid_phosphat_B: HAD 93.8 0.066 1.4E-06 53.4 4.1 89 592-700 115-207 (229)
168 KOG3120 Predicted haloacid deh 93.4 0.1 2.2E-06 49.7 4.2 116 592-711 84-209 (256)
169 COG3700 AphA Acid phosphatase 93.2 0.11 2.5E-06 47.3 4.1 90 593-710 115-210 (237)
170 TIGR01680 Veg_Stor_Prot vegeta 93.1 0.6 1.3E-05 46.9 9.5 81 590-698 143-235 (275)
171 PF08235 LNS2: LNS2 (Lipin/Ned 92.6 0.8 1.7E-05 42.1 8.8 102 591-707 26-141 (157)
172 PRK10748 flavin mononucleotide 91.6 0.35 7.6E-06 48.7 6.0 93 592-710 113-206 (238)
173 COG1011 Predicted hydrolase (H 91.5 0.62 1.4E-05 46.5 7.8 98 591-711 98-199 (229)
174 KOG3040 Predicted sugar phosph 91.4 1 2.2E-05 42.6 8.1 51 582-632 13-66 (262)
175 TIGR01689 EcbF-BcbF capsule bi 91.3 0.93 2E-05 40.2 7.5 33 591-623 23-55 (126)
176 TIGR01684 viral_ppase viral ph 90.7 0.48 1E-05 48.1 5.8 42 593-634 146-188 (301)
177 PLN02151 trehalose-phosphatase 90.5 2.2 4.8E-05 45.1 10.7 47 580-627 106-154 (354)
178 PRK10444 UMP phosphatase; Prov 90.1 0.3 6.6E-06 49.4 3.9 48 585-632 10-60 (248)
179 TIGR01452 PGP_euk phosphoglyco 89.6 1.4 3E-05 45.7 8.4 49 585-633 11-62 (279)
180 TIGR01493 HAD-SF-IA-v2 Haloaci 87.9 0.56 1.2E-05 44.6 3.9 86 592-704 90-175 (175)
181 COG2503 Predicted secreted aci 87.2 3.2 7E-05 40.5 8.3 88 591-704 121-212 (274)
182 PF02358 Trehalose_PPase: Treh 85.9 3.2 6.8E-05 41.7 8.2 57 671-727 163-233 (235)
183 PF05822 UMPH-1: Pyrimidine 5' 85.9 1.7 3.7E-05 43.2 5.9 133 591-737 89-241 (246)
184 COG0241 HisB Histidinol phosph 85.2 1.1 2.3E-05 42.4 4.0 98 592-707 31-144 (181)
185 PHA03398 viral phosphatase sup 84.9 2.2 4.7E-05 43.6 6.2 41 594-634 150-190 (303)
186 TIGR02251 HIF-SF_euk Dullard-l 84.9 0.88 1.9E-05 42.7 3.3 98 589-709 39-136 (162)
187 TIGR01663 PNK-3'Pase polynucle 84.8 2.2 4.8E-05 47.9 7.0 40 593-632 198-249 (526)
188 TIGR02244 HAD-IG-Ncltidse HAD 83.6 5.3 0.00012 42.2 8.8 107 593-706 185-317 (343)
189 TIGR01657 P-ATPase-V P-type AT 81.0 57 0.0012 40.8 17.8 21 131-151 249-271 (1054)
190 PF13242 Hydrolase_like: HAD-h 79.9 1.7 3.6E-05 34.6 2.8 57 671-727 7-71 (75)
191 PF12689 Acid_PPase: Acid Phos 79.2 5.5 0.00012 37.4 6.3 97 592-709 45-146 (169)
192 COG0647 NagD Predicted sugar p 78.1 2.8 6.1E-05 42.6 4.3 46 584-629 16-61 (269)
193 COG1877 OtsB Trehalose-6-phosp 77.5 13 0.00028 37.7 8.9 42 589-630 37-79 (266)
194 KOG3085 Predicted hydrolase (H 77.0 8.5 0.00018 38.2 7.2 108 591-721 112-223 (237)
195 TIGR01452 PGP_euk phosphoglyco 74.0 15 0.00032 38.0 8.6 101 593-711 144-247 (279)
196 PLN03190 aminophospholipid tra 74.0 70 0.0015 40.3 15.6 97 52-164 102-198 (1178)
197 TIGR01456 CECR5 HAD-superfamil 70.9 21 0.00046 37.7 9.0 49 585-633 9-65 (321)
198 TIGR01460 HAD-SF-IIA Haloacid 67.7 9.8 0.00021 38.2 5.5 48 585-632 7-58 (236)
199 TIGR01459 HAD-SF-IIA-hyp4 HAD- 66.8 5.3 0.00012 40.3 3.4 96 594-708 140-237 (242)
200 TIGR01517 ATPase-IIB_Ca plasma 65.2 77 0.0017 39.1 13.4 62 91-152 136-207 (941)
201 PRK14194 bifunctional 5,10-met 63.7 32 0.00069 35.7 8.2 44 591-634 14-66 (301)
202 TIGR01652 ATPase-Plipid phosph 60.2 1.6E+02 0.0035 36.9 15.2 95 54-164 18-113 (1057)
203 PF06506 PrpR_N: Propionate ca 60.0 37 0.00081 32.2 7.6 108 595-749 64-172 (176)
204 COG0474 MgtA Cation transport 59.9 1.9E+02 0.0042 35.5 15.4 277 4-318 42-329 (917)
205 PF00389 2-Hacid_dh: D-isomer 57.1 1.4E+02 0.0031 26.5 11.8 85 589-711 3-89 (133)
206 TIGR01116 ATPase-IIA1_Ca sarco 56.7 3.3E+02 0.0072 33.6 16.7 214 93-319 46-271 (917)
207 KOG2914 Predicted haloacid-hal 54.4 60 0.0013 32.0 8.0 116 592-726 92-213 (222)
208 PF00122 E1-E2_ATPase: E1-E2 A 53.7 1E+02 0.0022 30.5 10.0 167 145-323 42-212 (230)
209 PF05761 5_nucleotid: 5' nucle 53.6 21 0.00046 39.4 5.2 109 594-706 185-318 (448)
210 PTZ00445 p36-lilke protein; Pr 53.4 43 0.00093 32.6 6.6 30 592-621 75-104 (219)
211 PRK14188 bifunctional 5,10-met 53.2 78 0.0017 32.8 9.0 61 666-726 137-207 (296)
212 PF03120 DNA_ligase_OB: NAD-de 53.2 6.7 0.00015 31.7 1.0 23 136-158 44-67 (82)
213 PRK10444 UMP phosphatase; Prov 53.1 1.4E+02 0.003 30.2 10.8 42 670-711 176-219 (248)
214 TIGR01106 ATPase-IIC_X-K sodiu 51.9 4.6E+02 0.0099 32.7 16.9 76 90-166 110-195 (997)
215 TIGR01522 ATPase-IIA2_Ca golgi 51.4 2.2E+02 0.0047 35.0 13.9 72 95-167 91-172 (884)
216 PRK14174 bifunctional 5,10-met 51.1 88 0.0019 32.4 8.9 44 591-634 11-64 (295)
217 TIGR01647 ATPase-IIIA_H plasma 50.2 3.6E+02 0.0077 32.4 15.2 107 47-164 28-144 (755)
218 PRK14170 bifunctional 5,10-met 50.2 77 0.0017 32.5 8.3 45 591-635 12-65 (284)
219 TIGR02250 FCP1_euk FCP1-like p 48.9 26 0.00055 32.6 4.3 42 591-633 57-98 (156)
220 TIGR01524 ATPase-IIIB_Mg magne 47.6 5.5E+02 0.012 31.4 16.5 75 91-167 96-186 (867)
221 PRK15122 magnesium-transportin 46.2 6.5E+02 0.014 31.0 18.6 206 89-318 116-350 (903)
222 PRK14169 bifunctional 5,10-met 45.7 1.1E+02 0.0025 31.3 8.7 45 591-635 11-64 (282)
223 cd00860 ThrRS_anticodon ThrRS 45.4 58 0.0013 26.5 5.6 48 586-633 6-54 (91)
224 PRK14182 bifunctional 5,10-met 44.3 1.1E+02 0.0024 31.4 8.3 45 591-635 11-64 (282)
225 PF15584 Imm44: Immunity prote 43.9 11 0.00025 30.6 0.9 20 144-163 13-32 (94)
226 PRK11507 ribosome-associated p 43.8 31 0.00067 26.9 3.3 26 127-152 38-63 (70)
227 KOG2882 p-Nitrophenyl phosphat 43.4 34 0.00073 35.0 4.4 48 585-632 31-81 (306)
228 PF13380 CoA_binding_2: CoA bi 42.2 32 0.0007 30.0 3.7 40 593-632 64-104 (116)
229 PRK14184 bifunctional 5,10-met 41.7 1.5E+02 0.0032 30.6 8.8 44 591-634 11-64 (286)
230 PRK14189 bifunctional 5,10-met 41.6 1.2E+02 0.0027 31.2 8.2 44 591-634 13-65 (285)
231 PRK14179 bifunctional 5,10-met 41.1 1.3E+02 0.0028 31.0 8.3 61 666-726 137-207 (284)
232 PRK14186 bifunctional 5,10-met 40.8 1.1E+02 0.0024 31.7 7.8 44 591-634 12-65 (297)
233 KOG3109 Haloacid dehalogenase- 40.6 1.4E+02 0.0031 29.1 7.8 107 587-709 94-202 (244)
234 PLN02645 phosphoglycolate phos 40.6 46 0.00099 35.0 5.2 36 675-710 237-274 (311)
235 cd05017 SIS_PGI_PMI_1 The memb 40.4 59 0.0013 28.4 5.2 37 593-631 55-91 (119)
236 PF12368 DUF3650: Protein of u 40.3 25 0.00053 21.8 1.8 15 21-35 13-27 (28)
237 TIGR00216 ispH_lytB (E)-4-hydr 40.2 1.4E+02 0.003 30.7 8.3 141 541-713 100-264 (280)
238 PF13275 S4_2: S4 domain; PDB: 39.5 16 0.00036 28.0 1.2 24 127-150 34-57 (65)
239 PRK14166 bifunctional 5,10-met 39.1 1.3E+02 0.0028 31.0 7.9 44 591-634 11-63 (282)
240 PF06941 NT5C: 5' nucleotidase 37.9 24 0.00053 33.9 2.5 29 592-620 73-101 (191)
241 PRK14172 bifunctional 5,10-met 37.9 1.5E+02 0.0032 30.5 8.1 61 666-726 137-207 (278)
242 CHL00200 trpA tryptophan synth 37.8 3.8E+02 0.0082 27.3 11.1 103 588-713 124-233 (263)
243 PRK14190 bifunctional 5,10-met 36.0 1.6E+02 0.0035 30.3 8.1 44 591-634 13-65 (284)
244 PRK10517 magnesium-transportin 35.7 9.2E+02 0.02 29.7 17.2 70 95-165 133-218 (902)
245 COG1188 Ribosome-associated he 35.4 45 0.00097 28.0 3.2 29 127-156 35-63 (100)
246 PF11019 DUF2608: Protein of u 34.7 1.2E+02 0.0025 30.8 6.8 106 592-704 81-197 (252)
247 KOG0208 Cation transport ATPas 34.1 3.6E+02 0.0079 32.7 11.1 77 97-184 221-302 (1140)
248 PRK14193 bifunctional 5,10-met 33.9 1.6E+02 0.0034 30.3 7.6 44 591-634 13-65 (284)
249 PRK15424 propionate catabolism 33.7 4.5E+02 0.0098 30.0 11.9 79 596-706 95-174 (538)
250 PLN02591 tryptophan synthase 33.5 3.5E+02 0.0076 27.3 9.9 101 591-713 114-220 (250)
251 PLN02897 tetrahydrofolate dehy 32.9 2.7E+02 0.0059 29.5 9.2 45 590-634 65-119 (345)
252 TIGR02468 sucrsPsyn_pln sucros 31.7 2E+02 0.0043 35.5 9.1 39 594-632 786-828 (1050)
253 PF03129 HGTP_anticodon: Antic 31.7 1.1E+02 0.0024 25.2 5.2 50 584-633 2-55 (94)
254 PF12710 HAD: haloacid dehalog 31.6 23 0.00049 33.9 1.2 13 344-356 1-13 (192)
255 PF01455 HupF_HypC: HupF/HypC 31.2 1.2E+02 0.0025 23.7 4.7 31 124-154 17-50 (68)
256 PRK14178 bifunctional 5,10-met 30.9 2.1E+02 0.0046 29.4 7.9 62 666-727 131-202 (279)
257 cd00859 HisRS_anticodon HisRS 30.9 1.2E+02 0.0025 24.3 5.3 47 586-632 6-53 (91)
258 cd05008 SIS_GlmS_GlmD_1 SIS (S 30.4 57 0.0012 28.6 3.5 32 593-624 58-89 (126)
259 cd02071 MM_CoA_mut_B12_BD meth 30.1 1.3E+02 0.0029 26.3 5.7 55 579-633 49-105 (122)
260 TIGR01494 ATPase_P-type ATPase 29.7 6.3E+02 0.014 28.5 12.6 36 130-167 53-88 (499)
261 PRK14167 bifunctional 5,10-met 29.7 1.2E+02 0.0027 31.3 6.1 45 591-635 12-65 (297)
262 COG0279 GmhA Phosphoheptose is 29.7 67 0.0014 29.8 3.6 45 580-626 110-154 (176)
263 cd05014 SIS_Kpsf KpsF-like pro 28.4 54 0.0012 28.9 3.0 33 593-625 59-91 (128)
264 PRK14177 bifunctional 5,10-met 27.9 3.1E+02 0.0067 28.3 8.5 44 591-634 13-66 (284)
265 PF14336 DUF4392: Domain of un 27.4 2.1E+02 0.0046 29.6 7.4 40 593-632 61-101 (291)
266 COG4229 Predicted enolase-phos 26.7 2E+02 0.0043 27.2 6.1 93 589-706 100-198 (229)
267 PLN02616 tetrahydrofolate dehy 26.6 3.5E+02 0.0077 28.9 8.8 45 589-633 81-135 (364)
268 cd05710 SIS_1 A subgroup of th 26.5 73 0.0016 27.9 3.4 31 593-623 59-89 (120)
269 PF05240 APOBEC_C: APOBEC-like 26.0 97 0.0021 22.9 3.2 26 594-619 1-26 (55)
270 cd01917 ACS_2 Acetyl-CoA synth 25.9 1.8E+02 0.004 29.5 6.2 151 581-741 125-283 (287)
271 PF09926 DUF2158: Uncharacteri 25.8 45 0.00099 24.4 1.5 12 143-154 2-13 (53)
272 PRK14175 bifunctional 5,10-met 25.7 1.4E+02 0.0031 30.8 5.7 45 591-635 13-66 (286)
273 PRK14183 bifunctional 5,10-met 25.7 3.4E+02 0.0075 27.9 8.4 61 666-726 136-206 (281)
274 cd01994 Alpha_ANH_like_IV This 25.4 4.8E+02 0.01 25.1 9.1 39 596-634 11-62 (194)
275 PRK05585 yajC preprotein trans 25.0 3.8E+02 0.0082 23.0 7.2 12 108-119 39-50 (106)
276 PRK01045 ispH 4-hydroxy-3-meth 24.9 2.7E+02 0.0059 28.9 7.6 141 541-713 100-266 (298)
277 COG4996 Predicted phosphatase 24.7 1.5E+02 0.0032 26.4 4.6 43 592-634 41-83 (164)
278 PF12304 BCLP: Beta-casein lik 24.7 4.7E+02 0.01 24.8 8.1 36 287-322 75-110 (188)
279 smart00306 HintN Hint (Hedgeho 24.3 75 0.0016 26.3 3.0 26 126-151 74-99 (100)
280 PRK14171 bifunctional 5,10-met 24.2 2.7E+02 0.0059 28.7 7.4 42 592-633 13-64 (288)
281 PF08645 PNK3P: Polynucleotide 23.7 69 0.0015 29.8 2.8 25 593-617 30-54 (159)
282 PF06341 DUF1056: Protein of u 23.6 2.1E+02 0.0046 21.8 4.7 26 51-76 4-29 (63)
283 PF00875 DNA_photolyase: DNA p 23.5 4.4E+02 0.0096 24.3 8.4 37 597-633 55-91 (165)
284 TIGR02329 propionate_PrpR prop 23.2 8.5E+02 0.018 27.7 11.8 79 596-706 85-164 (526)
285 PRK14191 bifunctional 5,10-met 22.9 2E+02 0.0044 29.6 6.1 44 591-634 11-64 (285)
286 PRK14187 bifunctional 5,10-met 22.8 4.1E+02 0.0089 27.5 8.3 44 591-634 12-65 (294)
287 PF03332 PMM: Eukaryotic phosp 22.4 58 0.0013 31.9 2.0 48 671-718 160-213 (220)
288 KOG1419 Voltage-gated K+ chann 22.3 1.4E+02 0.0031 33.2 5.0 27 146-178 173-199 (654)
289 TIGR01525 ATPase-IB_hvy heavy 22.2 7.4E+02 0.016 28.4 11.4 36 130-167 75-110 (556)
290 TIGR00739 yajC preprotein tran 22.2 1.7E+02 0.0037 23.9 4.4 48 89-153 2-49 (84)
291 PRK14185 bifunctional 5,10-met 22.0 2.3E+02 0.005 29.3 6.4 44 591-634 11-64 (293)
292 PRK03692 putative UDP-N-acetyl 21.9 7.3E+02 0.016 24.9 9.8 122 597-743 94-225 (243)
293 PRK05886 yajC preprotein trans 21.8 2.1E+02 0.0046 24.6 5.1 47 90-153 4-50 (109)
294 PRK13111 trpA tryptophan synth 21.8 8.5E+02 0.018 24.7 11.2 98 593-713 127-230 (258)
295 PF12148 DUF3590: Protein of u 21.7 45 0.00098 27.1 0.9 28 130-157 54-81 (85)
296 cd00738 HGTP_anticodon HGTP an 21.4 2E+02 0.0043 23.3 5.0 47 586-632 6-56 (94)
297 PF01380 SIS: SIS domain SIS d 21.4 1.1E+02 0.0024 26.7 3.7 37 590-626 62-98 (131)
298 PF06645 SPC12: Microsomal sig 20.8 4.4E+02 0.0095 21.0 6.9 21 247-267 6-26 (76)
299 PLN02580 trehalose-phosphatase 20.7 1.1E+02 0.0024 33.0 3.9 48 580-628 127-176 (384)
300 PRK05585 yajC preprotein trans 20.6 5E+02 0.011 22.3 7.1 14 140-153 51-64 (106)
301 cd05013 SIS_RpiR RpiR-like pro 20.5 1.1E+02 0.0025 26.9 3.6 32 595-626 74-105 (139)
302 PRK12360 4-hydroxy-3-methylbut 20.4 4.5E+02 0.0099 27.0 8.1 142 541-714 103-266 (281)
303 TIGR01512 ATPase-IB2_Cd heavy 20.1 9.5E+02 0.021 27.4 11.7 156 130-321 74-230 (536)
304 PRK06437 hypothetical protein; 20.1 1.7E+02 0.0036 22.6 3.8 30 121-151 32-61 (67)
305 TIGR03679 arCOG00187 arCOG0018 20.0 7.2E+02 0.016 24.4 9.3 39 596-634 9-60 (218)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-134 Score=1073.74 Aligned_cols=766 Identities=56% Similarity=0.828 Sum_probs=703.1
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC
Q 003909 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (787)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (787)
|+.+|+.+++|.+..+.+|++.|||.+|+.+|++.||+|+++.+...++|+.+++||.++++.+++.++++|+++.++
T Consensus 1 t~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~-- 78 (972)
T KOG0202|consen 1 TEEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADF-- 78 (972)
T ss_pred CcchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhc--
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999988654
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccce
Q 003909 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (787)
Q Consensus 81 ~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~ 160 (787)
.++.+|.++++++..++++||+|++|+++.|+++.++.++|+|+|+.+.+++++|||||||.++-||+||||.
T Consensus 79 -------~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADl 151 (972)
T KOG0202|consen 79 -------DEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADL 151 (972)
T ss_pred -------ccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccce
Confidence 4778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCceEEecccccCCcccccccccccc-ccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccC
Q 003909 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSII-ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (787)
Q Consensus 161 ~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~-~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~ 239 (787)
++++. -++.+|||.|||||.|+.|...... .+....+++.|++|+||.|..|+++|+|+.||.+|.+|++.+.+.+.
T Consensus 152 Rl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~ 229 (972)
T KOG0202|consen 152 RLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQAT 229 (972)
T ss_pred eEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhcc
Confidence 99984 4499999999999999999877666 66788899999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc-chhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
++.++|+|++++.+...+..++.++|+.+|++.+.++.++.+.+ |++.+..+|..++++.++++|.+||+.++++++.+
T Consensus 230 e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG 309 (972)
T KOG0202|consen 230 ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG 309 (972)
T ss_pred CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence 99999999999999999998899999999999888888777765 78889999999999999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
.+||+|+++++|...+.|.||.+++||+|||||||+|+|.+.++++.+....+. .....+|..|+|.+..+.......
T Consensus 310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~--~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV--DEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc--cccccCCceeCCCCceEecCcccc
Confidence 999999999999999999999999999999999999999999999987655443 566678889999988877765555
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCcccc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (787)
+.....+.+.+++.+.++||++...+++. +.+...|.|+|.||..++++.|++..... ...+++ ....++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~-----~~s~~~-~~~c~~~~~ 460 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRST-----NLSNEE-ASACNRVYS 460 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhh-----cccccc-cccchhHHH
Confidence 45557788999999999999999888776 77888999999999999999998764311 111222 335556677
Q ss_pred ccccEeEeecCCCCCceEEEEEeeCC---eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhcccc
Q 003909 479 IEFKKVSILEFSRDRKMMSVLCSHKQ---MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEA 555 (787)
Q Consensus 479 ~~~~~l~~~~f~~~~~~~sviv~~~~---~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 555 (787)
..+++...+||+++||+|+|.|.++. ++.+|+||++|.|+++|+++..++++...|+++..|+.+.+...++++ +|
T Consensus 461 ~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~-~g 539 (972)
T KOG0202|consen 461 RLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGS-EG 539 (972)
T ss_pred HhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhh-cc
Confidence 78889999999999999999998743 478999999999999999998885557799999999999999999998 99
Q ss_pred chhhhhhhccCCc-cccCC------C-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003909 556 LRCLALALKQMPI-NRQTL------S-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (787)
Q Consensus 556 ~~~l~~a~~~~~~-~~~~~------~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~ 627 (787)
+||+++|++..+. ..+.. . ...|.||+|+|++++.||+|++++++|+.|+++||+|.|+|||+..||.+||+
T Consensus 540 LRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r 619 (972)
T KOG0202|consen 540 LRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAR 619 (972)
T ss_pred ceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH
Confidence 9999999997763 21111 1 12289999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 003909 628 KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 628 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
++|+.....+..+.+++|.+++.+..++.........+|+|++|.+|.++|+.||+.|+.|+|.|||.||+|+||.||+|
T Consensus 620 ~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 620 EIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred HhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence 99999888778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheec
Q 003909 708 IAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVN 786 (787)
Q Consensus 708 ia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 786 (787)
|||| +|++.+|++||+|+.|+|+..|..++++||.+|.|+++++.|.++.|++.++++++++.|++|.||+|+|+||+|
T Consensus 700 IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiN 779 (972)
T KOG0202|consen 700 IAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWIN 779 (972)
T ss_pred eeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheee
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 003909 787 I 787 (787)
Q Consensus 787 l 787 (787)
|
T Consensus 780 l 780 (972)
T KOG0202|consen 780 L 780 (972)
T ss_pred e
Confidence 7
No 2
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=8.7e-113 Score=1009.97 Aligned_cols=756 Identities=30% Similarity=0.483 Sum_probs=619.9
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCC
Q 003909 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (787)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (787)
-.||..+++|+++.|++++.+|||++||++|+++||+|+++.++++++|+.+++||++++.+++++++++++++
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~------ 78 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM------ 78 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH------
Confidence 36999999999999999999999999999999999999999998889999999999999999999999998865
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCcccccee
Q 003909 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMR 161 (787)
Q Consensus 82 ~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~ 161 (787)
..|.++++|+++++++..++.++++|++++++.|+++.+.+++|+|||++++|++++|||||||.|++||+||||++
T Consensus 79 ---~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 79 ---HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ---hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCceEEecccccCCcccccccccccc--ccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccC
Q 003909 162 MIEMLSNQLRVDQAILTGESCSVEKELDSII--ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (787)
Q Consensus 162 il~~~~g~~~vdes~ltGEs~pv~k~~~~~~--~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~ 239 (787)
|++ ++++.||||+|||||.|+.|.+.... .......++.|++|+||.|.+|++.++|++||.+|.+|++.+++...
T Consensus 156 Li~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~ 233 (1053)
T TIGR01523 156 LIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGD 233 (1053)
T ss_pred EEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhh
Confidence 997 57899999999999999999875332 11233456789999999999999999999999999999999987543
Q ss_pred CC-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003909 240 ED-----------------------------------EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGF 284 (787)
Q Consensus 240 ~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (787)
+. .++|+++.+++++.++..+.++++++.+++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---------- 303 (1053)
T TIGR01523 234 GGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---------- 303 (1053)
T ss_pred hhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------
Confidence 21 248999999999998888877777777664321
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEE
Q 003909 285 LRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (787)
Q Consensus 285 ~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~ 364 (787)
......+.++++++++++|.+||+.++++++.+.+||+++++++|+.+++|.||.+++||+|||||||+|+|+|++++.
T Consensus 304 -~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~ 382 (1053)
T TIGR01523 304 -DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWI 382 (1053)
T ss_pred -hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEE
Confidence 0112455678899999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ecccccCcceeEEeec--CccccCC-Cc---------------------cccCC--Cccc-cCC--CChhHHHHHHHHhh
Q 003909 365 VHSVQQGPIIAEYGVT--GTTYAPE-GV---------------------VFDSS--GIQL-EFP--AQLPCLLHIARCSA 415 (787)
Q Consensus 365 ~~~~~~~~~~~~~~~~--~~~~~~~-~~---------------------~~~~~--~~~~-~~~--~~~~~~~~~~~~~~ 415 (787)
.+... .... +..+.|+ +. ..... ..+. ..+ ...+.+..+..+..
T Consensus 383 ~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 455 (1053)
T TIGR01523 383 PRFGT-------ISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAA 455 (1053)
T ss_pred cCCce-------EEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 53100 0000 0011111 00 00000 0000 000 01234567888889
Q ss_pred hcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCC-chhhhhhhhh-h--ccccccCccccccccEeEeecCCC
Q 003909 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDS-MPSALNMLSK-H--ERASYCNHHWEIEFKKVSILEFSR 491 (787)
Q Consensus 416 l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~-~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~f~~ 491 (787)
+||++....+...+.....|+|+|.||+.++.+.|+..... ....+..... + .......+.....|+++..+||+|
T Consensus 456 lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds 535 (1053)
T TIGR01523 456 LANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDS 535 (1053)
T ss_pred hccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCC
Confidence 99987654221122234568999999999999888642100 0000000000 0 000000011134678999999999
Q ss_pred CCceEEEEEeeC-C-eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCcc
Q 003909 492 DRKMMSVLCSHK-Q-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPIN 569 (787)
Q Consensus 492 ~~~~~sviv~~~-~-~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~ 569 (787)
+||+|+++++.+ + ++++|+||+||.|+++|+.+...+++...+++++.++.+.+.+++|+. +|+||+++|||.++..
T Consensus 536 ~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~-~GlRvLa~A~r~l~~~ 614 (1053)
T TIGR01523 536 EIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA-EGLRVLAFASKSFDKA 614 (1053)
T ss_pred CCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHh-cCCeEEEEEEEECCch
Confidence 999999999864 3 478999999999999999876542334578999999999999999998 9999999999988643
Q ss_pred ccC---C-----C-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---
Q 003909 570 RQT---L-----S-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD--- 637 (787)
Q Consensus 570 ~~~---~-----~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~--- 637 (787)
+.. . . ...|+|++|+|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++||......
T Consensus 615 ~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~ 694 (1053)
T TIGR01523 615 DNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDR 694 (1053)
T ss_pred hccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccc
Confidence 210 0 0 123789999999999999999999999999999999999999999999999999999743210
Q ss_pred ---cccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-Cc
Q 003909 638 ---FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SG 713 (787)
Q Consensus 638 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~ 713 (787)
....+++|.+++.+.++++...+....||+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| +|
T Consensus 695 ~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~g 774 (1053)
T TIGR01523 695 DEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGING 774 (1053)
T ss_pred cccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCc
Confidence 12468899999999988888888888999999999999999999999999999999999999999999999999 89
Q ss_pred cHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cC-CCchhHhhhheecC
Q 003909 714 TAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVL----GI-PDTLAPVSLISVNI 787 (787)
Q Consensus 714 ~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~----~~-~~~l~~~~~l~~~l 787 (787)
++.++++||+++.++++..|..++++||++++|+++++.|.++.|+..+++.+++.++ |. |.||+|+|+||+||
T Consensus 775 t~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inl 853 (1053)
T TIGR01523 775 SDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIM 853 (1053)
T ss_pred cHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988888 44 58999999999996
No 3
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-112 Score=996.83 Aligned_cols=714 Identities=43% Similarity=0.643 Sum_probs=630.3
Q ss_pred cccccCCHH--HHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhc
Q 003909 2 EDAYARSVV--EVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALIN 79 (787)
Q Consensus 2 ~~~~~~~~~--~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (787)
+.||..+.+ ++...+.+++..||+++|+.+|++.||+|+++..+..++|+.++.+|++++..+++.++.++++++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~ 100 (917)
T COG0474 21 ETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWV 100 (917)
T ss_pred ccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 467888899 999999999999999999999999999999999888899999999999999999999999998876542
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccc
Q 003909 80 GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (787)
Q Consensus 80 ~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD 159 (787)
+.. .....++.+++++..+++++++|++++++++++..+.+++|+|||++++|++++|||||||++++||+||||
T Consensus 101 ~~~-----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD 175 (917)
T COG0474 101 DAG-----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPAD 175 (917)
T ss_pred ccC-----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccc
Confidence 110 334567777888888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCCceEEecccccCCccccccccccccccccCCC-CCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 160 MRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQ-DKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 160 ~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~-~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
++++++ ..++||||+|||||.|+.|.+........+.. ++.|++|+||.+.+|++.++|++||.+|.+|++.+.+..
T Consensus 176 ~rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~ 253 (917)
T COG0474 176 LRLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPT 253 (917)
T ss_pred eEEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhcc
Confidence 999984 33799999999999999999876654445554 789999999999999999999999999999999999988
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
.....+|+++.++++..++..+.++++++.+++..+.... .+...|.++++++++++|.+||+.++++++.+
T Consensus 254 ~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~v~l~va~IPegLp~~vti~la~g 325 (917)
T COG0474 254 KKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGN--------GLLESFLTALALAVAAVPEGLPAVVTIALALG 325 (917)
T ss_pred ccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------cHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Confidence 7778899999999999999999999888888877443221 14567889999999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecc-cccCcceeEEeecCccccCCCccccCCCcc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHS-VQQGPIIAEYGVTGTTYAPEGVVFDSSGIQ 397 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (787)
..+|+++++++|+++++|.||++++||+|||||||+|+|+|.+++..+. ... .+
T Consensus 326 ~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~--------------~~----------- 380 (917)
T COG0474 326 AQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDI--------------DD----------- 380 (917)
T ss_pred HHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccc--------------cc-----------
Confidence 9999999999999999999999999999999999999999999998741 100 00
Q ss_pred ccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccc
Q 003909 398 LEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHW 477 (787)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (787)
......+.+.+++..+++||+.....+ + .+..+||+|.|+++++++.|... .. +..
T Consensus 381 -~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~-~~------------------~~~ 436 (917)
T COG0474 381 -KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL-DL------------------SGL 436 (917)
T ss_pred -cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC-CH------------------HHH
Confidence 000123344567888899998766543 2 56689999999999999887632 00 122
Q ss_pred cccccEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccc
Q 003909 478 EIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEAL 556 (787)
Q Consensus 478 ~~~~~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (787)
...++++..+||+|+||||||+++. ++++.+++||+||.|+++|++. +...+++++.++.+.+..+++++ +|+
T Consensus 437 ~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~-----~~~~~~~~~~~~~~~~~~~~la~-~gl 510 (917)
T COG0474 437 EVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI-----GELEPLTEEGLRTLEEAVKELAS-EGL 510 (917)
T ss_pred hhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc-----CcccccCHHHHHHHHHHHHHHHH-HHH
Confidence 3456789999999999999999984 5568999999999999999875 44567889999999999999998 999
Q ss_pred hhhhhhhccCCccccCCC-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCc
Q 003909 557 RCLALALKQMPINRQTLS-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL 635 (787)
Q Consensus 557 ~~l~~a~~~~~~~~~~~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~ 635 (787)
|++++|||..+..+.... .+.|+|+.|+|+++|+||+|++++++|+.|+++||+++|+|||+..||+++|+++|+....
T Consensus 511 Rvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~ 590 (917)
T COG0474 511 RVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEA 590 (917)
T ss_pred HHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCC
Confidence 999999997765544322 2448999999999999999999999999999999999999999999999999999987643
Q ss_pred cccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-Ccc
Q 003909 636 VDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGT 714 (787)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~ 714 (787)
.. +.+++|.+++.+.++++...+.+..||||++|+||.++|+.+|+.|+.|+|+|||.||+||||+|||||||+ +|+
T Consensus 591 ~~--~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gt 668 (917)
T COG0474 591 ES--ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGT 668 (917)
T ss_pred Cc--eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHH
Confidence 21 458899999999999999999988999999999999999999999999999999999999999999999999 799
Q ss_pred HHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHhhhheecC
Q 003909 715 AVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP-DTLAPVSLISVNI 787 (787)
Q Consensus 715 ~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~-~~l~~~~~l~~~l 787 (787)
+.+|++||+++.++++..+..+++|||++|.|+++++.|.++.|+..+++++++.+++.+ .|+++.|++|+||
T Consensus 669 daak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inl 742 (917)
T COG0474 669 DAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINL 742 (917)
T ss_pred HHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999996
No 4
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-114 Score=919.91 Aligned_cols=718 Identities=34% Similarity=0.491 Sum_probs=624.5
Q ss_pred CCHHHHHHHhCCCCCCCCCH--HHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 003909 7 RSVVEVLDFFGVDPTKGLTD--SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGL 84 (787)
Q Consensus 7 ~~~~~~~~~l~~~~~~GLs~--~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (787)
-++++|+++|++||..||+. +|..+|++.||.|.++++++++||+++|+.|.+...+++.+++++++.++++.. ...
T Consensus 101 gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~-g~~ 179 (1034)
T KOG0204|consen 101 GGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTP-GIE 179 (1034)
T ss_pred cCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccC-CCC
Confidence 46999999999999999986 889999999999999999999999999999999999999999999999988752 234
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeee
Q 003909 85 TAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQ-ADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMI 163 (787)
Q Consensus 85 ~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il 163 (787)
..|++++.|++.+++..++....+++.++..++|.+.. ..++.|+|||+.++|+..||++|||+.|+.||.+||||+++
T Consensus 180 ~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli 259 (1034)
T KOG0204|consen 180 DGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLI 259 (1034)
T ss_pred cccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEE
Confidence 58999999988888777778888888888888886443 34689999999999999999999999999999999999999
Q ss_pred eecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCC
Q 003909 164 EMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEV 243 (787)
Q Consensus 164 ~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~ 243 (787)
+ +.++.+|||++||||++++|.+. .++++++||++.+|.++++|+.+|.+|..|+++..+.....++
T Consensus 260 ~--gn~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~ 326 (1034)
T KOG0204|consen 260 Q--GNSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEE 326 (1034)
T ss_pred e--ccceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcC
Confidence 7 67899999999999999999863 3679999999999999999999999999999999999988899
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----------CCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHH
Q 003909 244 TPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-----------PSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVT 312 (787)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~ 312 (787)
+|+|-++++++..+..+.+.++.+.+++....+.. .+.....+.+..+|..++.++++++|.+||++++
T Consensus 327 tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVT 406 (1034)
T KOG0204|consen 327 TPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVT 406 (1034)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHH
Confidence 99999999999998888888777776665444321 0111135667788888889999999999999999
Q ss_pred HHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCcccc
Q 003909 313 TCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFD 392 (787)
Q Consensus 313 ~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (787)
+++++++++|.+.+.++|..+++|.+|+.++||.|||||||+|+|.|++.++.+..++... +.
T Consensus 407 LsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~------------~~----- 469 (1034)
T KOG0204|consen 407 LSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNS------------PK----- 469 (1034)
T ss_pred HHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccC------------cc-----
Confidence 9999999999999999999999999999999999999999999999999998765443210 00
Q ss_pred CCCccccCCCChhHHHH-HHHHhhhcccccccccCCC-CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccc
Q 003909 393 SSGIQLEFPAQLPCLLH-IARCSALCNESVLQYNPDK-GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERA 470 (787)
Q Consensus 393 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 470 (787)
. ....+.+.. +..+.+......+...... ......|+|+|+||+.|..+.|.++..
T Consensus 470 --~-----~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~--------------- 527 (1034)
T KOG0204|consen 470 --S-----SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD--------------- 527 (1034)
T ss_pred --c-----ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh---------------
Confidence 0 002233333 3344444333322222222 267788999999999999999876531
Q ss_pred cccCccccccccEeEeecCCCCCceEEEEEeeCCee-EEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHH
Q 003909 471 SYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC-VMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNS 549 (787)
Q Consensus 471 ~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~-~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (787)
.+.+.+.++.+||+|.||+|+++++.+++. ++|+||++|-|+.+|+.+.++ +|...+++++.+..+++.++.
T Consensus 528 ------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~-~g~~~~~~e~~~~~~~~~Ie~ 600 (1034)
T KOG0204|consen 528 ------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDS-NGELVPFNEDDRKSFKDVIEP 600 (1034)
T ss_pred ------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECC-CCCEeeCCHHHHHHHHHHHHH
Confidence 124557789999999999999999975444 499999999999999999887 889999999999999999999
Q ss_pred hhccccchhhhhhhccCCcc----ccCCC-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH
Q 003909 550 LAGKEALRCLALALKQMPIN----RQTLS-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES 624 (787)
Q Consensus 550 ~~~~~g~~~l~~a~~~~~~~----~~~~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ 624 (787)
|++ +|+||+|+||+++... .+... ...+.+++++|+++++||+||+++++|+.|+++||.|.|+|||+..||++
T Consensus 601 mA~-~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkA 679 (1034)
T KOG0204|consen 601 MAS-EGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKA 679 (1034)
T ss_pred HHH-hhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHH
Confidence 999 9999999999985432 11111 12278999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 003909 625 ICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 625 ~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A 704 (787)
||.+|||..+..+ ..++.|.+|.++.++++.+...+..|++|.+|.+|..+|+.++..|++|++.|||.||.|+|++|
T Consensus 680 IA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeA 757 (1034)
T KOG0204|consen 680 IARECGILTPGGD--FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEA 757 (1034)
T ss_pred HHHHcccccCCCc--cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhc
Confidence 9999999887543 46889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhh
Q 003909 705 DIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLI 783 (787)
Q Consensus 705 ~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l 783 (787)
|||.||| .|++.+|++||+|++|+|+.+|+.++++||+.|.++.|+++|.++-|+..++..|+++......||+++|+|
T Consensus 758 DVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlL 837 (1034)
T KOG0204|consen 758 DVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLL 837 (1034)
T ss_pred ccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecC
Q 003909 784 SVNI 787 (787)
Q Consensus 784 ~~~l 787 (787)
|+||
T Consensus 838 WVNL 841 (1034)
T KOG0204|consen 838 WVNL 841 (1034)
T ss_pred HHHH
Confidence 9996
No 5
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2.9e-111 Score=984.90 Aligned_cols=686 Identities=28% Similarity=0.460 Sum_probs=599.1
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCC
Q 003909 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (787)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (787)
...++.+++|+++.|++++ +|||++||++|+++||+|+++.++++++|+.++++|+++++++++++++++++.
T Consensus 47 ~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~------ 119 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------ 119 (902)
T ss_pred HHHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH------
Confidence 4567889999999999996 699999999999999999999999989999999999999999999888888754
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC------CeEEEeecCCCCCCcEEEecCCCc
Q 003909 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNVGCK 155 (787)
Q Consensus 82 ~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~------g~~~~i~~~~Lv~GDII~l~~G~~ 155 (787)
..|.++++++++++++.+++.++++|+++.++.|+++.+.+++|+|| |++++|++++|||||+|.|++||+
T Consensus 120 ---~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 120 ---EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 35778889999999999999999999999999999999999999999 789999999999999999999999
Q ss_pred cccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHH
Q 003909 156 IPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDS 235 (787)
Q Consensus 156 vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~ 235 (787)
|||||+|++ +..+.||||+|||||.|+.|.+++.........+++|.+|+||.+.+|.+.++|++||.+|.+|++.+.
T Consensus 197 IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~ 274 (902)
T PRK10517 197 IPADLRILQ--ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGR 274 (902)
T ss_pred EeeeEEEEE--cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHH
Confidence 999999997 456899999999999999999876544444556788999999999999999999999999999999999
Q ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 003909 236 MLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCL 315 (787)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~ 315 (787)
+.+++.+++|+++.+++++.+++.++++++.++++++.... ..+...+.+++++++++|||+||+++++++
T Consensus 275 v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~---------~~~~~~l~~alsv~V~~~Pe~LP~~vt~~l 345 (902)
T PRK10517 275 VSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK---------GDWWEAALFALSVAVGLTPEMLPMIVTSTL 345 (902)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc---------CCHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 99888889999999999999988888877777666543221 123456778899999999999999999999
Q ss_pred HHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCC
Q 003909 316 ALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSG 395 (787)
Q Consensus 316 ~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (787)
+.+..+|+|+|+++|+.+++|.||++|++|||||||||+|+|.|.++......
T Consensus 346 a~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~--------------------------- 398 (902)
T PRK10517 346 ARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK--------------------------- 398 (902)
T ss_pred HHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC---------------------------
Confidence 99999999999999999999999999999999999999999999876321000
Q ss_pred ccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 396 IQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
... .+.....+|... . ...+||+|.|++.+++..+. +
T Consensus 399 -------~~~---~ll~~a~l~~~~--~--------~~~~~p~d~All~~a~~~~~-----------------------~ 435 (902)
T PRK10517 399 -------TSE---RVLHSAWLNSHY--Q--------TGLKNLLDTAVLEGVDEESA-----------------------R 435 (902)
T ss_pred -------CHH---HHHHHHHhcCCc--C--------CCCCCHHHHHHHHHHHhcch-----------------------h
Confidence 011 122222333211 0 12479999999998764320 0
Q ss_pred cccccccEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccc
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKE 554 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (787)
.....|..+..+||++++|+|+++++. ++...+++||+||.++++|+++..+ |...+++++.++.+.+..++++. +
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~--~~~~~l~~~~~~~i~~~~~~~a~-~ 512 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHN--GEIVPLDDIMLRRIKRVTDTLNR-Q 512 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcC--CCeecCCHHHHHHHHHHHHHHHh-c
Confidence 012356778899999999999999875 4567899999999999999987643 55678888888888888899998 9
Q ss_pred cchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC
Q 003909 555 ALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (787)
Q Consensus 555 g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~ 634 (787)
|+|++++|||.++..........|+|++|+|+++|+|++||+++++|++|+++||+++|+|||++.+|.++|+++||..
T Consensus 513 G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~- 591 (902)
T PRK10517 513 GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA- 591 (902)
T ss_pred CCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-
Confidence 9999999999876543322222368999999999999999999999999999999999999999999999999999963
Q ss_pred ccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCcc
Q 003909 635 LVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGT 714 (787)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~ 714 (787)
+.+++|.+++.+.++++...+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||||+|+
T Consensus 592 -----~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gt 666 (902)
T PRK10517 592 -----GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAV 666 (902)
T ss_pred -----cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcC
Confidence 457899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 715 AVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 715 ~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+.+|++||+|+.++++..|.+++++||+++.|+++++.|.++.|+..++.++++.++..+.|++|+|+||+||
T Consensus 667 dvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl 739 (902)
T PRK10517 667 DIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNL 739 (902)
T ss_pred HHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888887775448999999999996
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=3e-110 Score=992.89 Aligned_cols=729 Identities=32% Similarity=0.480 Sum_probs=618.6
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC--
Q 003909 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING-- 80 (787)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 80 (787)
.||..+++|+++.|++|+.+|||++||++|+++||+|+++.++++++|+.++++|+++++++++++++++++.+.+..
T Consensus 16 ~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 16 DDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred CchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 489999999999999999999999999999999999999998888999999999999999999999999776644421
Q ss_pred --CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCcccc
Q 003909 81 --ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (787)
Q Consensus 81 --~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPa 158 (787)
......|+++++++++++++..++.++++|+++.++++.+..+.+++|+|||++++|++++|||||+|.|++||+|||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112246888889999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred ceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 159 D~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
||++++ ++.+.||||+|||||.|+.|.+++. ...+.+..|++|+||.+.+|.+.++|++||.+|.+|++.+.+..
T Consensus 176 D~~il~--~~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 250 (997)
T TIGR01106 176 DLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASG 250 (997)
T ss_pred eEEEEE--ccCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhh
Confidence 999997 4468999999999999999987532 22334678999999999999999999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
.+.+++|+++.++++..+++.+++++++++++++..... .+...+.+++++++++|||+||++++++++.+
T Consensus 251 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~ 321 (997)
T TIGR01106 251 LENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------TWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 321 (997)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CHHHHHHHHHHHHhhcCCccchHHHHHHHHHH
Confidence 777889999999999999988888877777666533221 23345677888999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
..+|+++|+++|+.+++|.||+++++|||||||||+|+|.|.+++..+..+.. .+. +.+.+..
T Consensus 322 ~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~--------~~~-~~~~~~~-------- 384 (997)
T TIGR01106 322 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA--------DTT-EDQSGVS-------- 384 (997)
T ss_pred HHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEec--------CCc-cCCCCcc--------
Confidence 99999999999999999999999999999999999999999999875432211 000 0000000
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
..........+..++++||++.+..+.+. ......|+|+|.|+++++.+.+... .
T Consensus 385 -~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~---------------------~ 442 (997)
T TIGR01106 385 -FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV---------------------M 442 (997)
T ss_pred -CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH---------------------H
Confidence 01112344467778889998755321111 0123468999999999987643211 0
Q ss_pred cccccccEeEeecCCCCCceEEEEEee----CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhh
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSH----KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~----~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (787)
.....++.+..+||+|+||+|++++.. ++++++|+||+||.|+++|+++.. +|...+++++.++.+.+.+++++
T Consensus 443 ~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~--~g~~~~l~~~~~~~~~~~~~~~a 520 (997)
T TIGR01106 443 EMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILI--HGKEQPLDEELKEAFQNAYLELG 520 (997)
T ss_pred HHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhc--CCCcccCCHHHHHHHHHHHHHHH
Confidence 112356788999999999999888753 246789999999999999998764 47778899999999999999999
Q ss_pred ccccchhhhhhhccCCccccCC----CCC----CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 552 GKEALRCLALALKQMPINRQTL----SYD----DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 552 ~~~g~~~l~~a~~~~~~~~~~~----~~~----~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
+ +|+|++++|||.++.++... ..+ .|+|++|+|+++++||+|++++++|++|+++|++++|+|||++.+|.
T Consensus 521 ~-~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~ 599 (997)
T TIGR01106 521 G-LGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 599 (997)
T ss_pred h-cCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 8 99999999999886432111 111 17899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCccc--------------------cccccccchhhccCChHHHHHhhccc--eEEEecChhhHHHHHHHH
Q 003909 624 SICHKIGAFDHLVD--------------------FVGRSYTASEFEELPAMQQTVALQHM--ALFTRVEPSHKRMLVEAL 681 (787)
Q Consensus 624 ~~a~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l 681 (787)
++|+++|+...... ....+++|.+++.+.++++.+.+.+. .||+|++|+||.++|+.+
T Consensus 600 ~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~l 679 (997)
T TIGR01106 600 AIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGC 679 (997)
T ss_pred HHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHH
Confidence 99999999643210 01257889999999888888777654 499999999999999999
Q ss_pred hhCCCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (787)
Q Consensus 682 ~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 760 (787)
|+.|++|+|+|||.||+|||++|||||||| +|++.+|++||+++.++++..|++++++||+++.|+++++.|.++.|+.
T Consensus 680 q~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~ 759 (997)
T TIGR01106 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 759 (997)
T ss_pred HHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.+++.+++.+++.|.|++|+|+||+||
T Consensus 760 ~~~~~~~~~~~~~~~pl~~~qlL~inl 786 (997)
T TIGR01106 760 EITPFLIFIIANIPLPLGTITILCIDL 786 (997)
T ss_pred HHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 999999999999999999999999996
No 7
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=4.2e-110 Score=976.87 Aligned_cols=686 Identities=29% Similarity=0.468 Sum_probs=598.2
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC
Q 003909 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (787)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (787)
|.+.|..+.+++++.|+++. +|||++|+.+|+++||+|+++.++++++|+.++++|+++++++++++++++++.
T Consensus 12 ~~~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~----- 85 (867)
T TIGR01524 12 LLKESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT----- 85 (867)
T ss_pred HHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH-----
Confidence 35789999999999999985 799999999999999999999988888999999999999999999888888755
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEe------CCeEEEeecCCCCCCcEEEecCCC
Q 003909 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR------NGCFSILPAAELVPGDIVEVNVGC 154 (787)
Q Consensus 81 ~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r------~g~~~~i~~~~Lv~GDII~l~~G~ 154 (787)
..|.++++++++++++..++.++++|++++++.|+++.+..++|+| ||++++|++++|||||+|.+++||
T Consensus 86 ----~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd 161 (867)
T TIGR01524 86 ----DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD 161 (867)
T ss_pred ----hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC
Confidence 4677888999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHH
Q 003909 155 KIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRD 234 (787)
Q Consensus 155 ~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~ 234 (787)
+|||||++++ +..+.||||+|||||.|+.|.+++.........+++|++|+||.+.+|.+.++|++||.+|.+|++.+
T Consensus 162 ~VPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~ 239 (867)
T TIGR01524 162 IIPADARVIS--ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI 239 (867)
T ss_pred EEcccEEEEe--cCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH
Confidence 9999999997 45689999999999999999987644334556677899999999999999999999999999999999
Q ss_pred HhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 003909 235 SMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTC 314 (787)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~ 314 (787)
.+.+ .+.++|+++.+++++.++..++++++++.++++.... ..+...+.+++++++++|||+||++++++
T Consensus 240 ~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~al~l~v~~iP~~Lp~~vt~~ 309 (867)
T TIGR01524 240 AATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK---------GDWLEAFLFALAVAVGLTPEMLPMIVSSN 309 (867)
T ss_pred HhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc---------CCHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 8887 6678999999999999998888887777766543221 12345677889999999999999999999
Q ss_pred HHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCC
Q 003909 315 LALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSS 394 (787)
Q Consensus 315 ~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (787)
++.+..+|+|+|+++|+.+++|.||++|++|||||||||+|+|+|.++...+..
T Consensus 310 la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~-------------------------- 363 (867)
T TIGR01524 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE-------------------------- 363 (867)
T ss_pred HHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC--------------------------
Confidence 999999999999999999999999999999999999999999999887422100
Q ss_pred CccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccC
Q 003909 395 GIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474 (787)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 474 (787)
.... +.....+++.. . ...+||+|.|++.++......
T Consensus 364 --------~~~~---~l~~a~l~~~~--~--------~~~~~p~~~Al~~~~~~~~~~---------------------- 400 (867)
T TIGR01524 364 --------TSER---VLKMAWLNSYF--Q--------TGWKNVLDHAVLAKLDESAAR---------------------- 400 (867)
T ss_pred --------CHHH---HHHHHHHhCCC--C--------CCCCChHHHHHHHHHHhhchh----------------------
Confidence 0111 22222222211 0 113599999999987643110
Q ss_pred ccccccccEeEeecCCCCCceEEEEEeeCC-eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhcc
Q 003909 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553 (787)
Q Consensus 475 ~~~~~~~~~l~~~~f~~~~~~~sviv~~~~-~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (787)
.....+..+..+||++++|+|+++++.++ ..++++||+||.++++|+++..+ |...+++++.++++.+.+++++.
T Consensus 401 -~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~--~~~~~l~~~~~~~i~~~~~~~a~- 476 (867)
T TIGR01524 401 -QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFG--GAVVTLSESEKSELQDMTAEMNR- 476 (867)
T ss_pred -hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcC--CceecCCHHHHHHHHHHHHHHHh-
Confidence 01234667888999999999999987644 57899999999999999987654 56668888888889999999998
Q ss_pred ccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC
Q 003909 554 EALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD 633 (787)
Q Consensus 554 ~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~ 633 (787)
+|+|++++|||+++..+.......|++++|+|+++|+|++||+++++|++|+++||+++|+|||+..+|.++|+++||..
T Consensus 477 ~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~ 556 (867)
T TIGR01524 477 QGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA 556 (867)
T ss_pred cCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 99999999999886543222222367999999999999999999999999999999999999999999999999999964
Q ss_pred CccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCc
Q 003909 634 HLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSG 713 (787)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~ 713 (787)
+.+++|.+++.+.++++...+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||++|
T Consensus 557 ------~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~g 630 (867)
T TIGR01524 557 ------NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTA 630 (867)
T ss_pred ------CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCc
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 714 TAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 714 ~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
++.+|++||+|+.++++..|++++++||++++|+++++.|.++.|+..++.++++.++..+.||+|+|+||+||
T Consensus 631 tdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl 704 (867)
T TIGR01524 631 ADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNL 704 (867)
T ss_pred cHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888887668999999999996
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=8e-110 Score=974.72 Aligned_cols=695 Identities=29% Similarity=0.436 Sum_probs=598.7
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC
Q 003909 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (787)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (787)
|.+.|+.+++|+++.|+++ .+|||++||++|+++||+|+++.++++++|+.+++||+++++++++++++++++.+.+..
T Consensus 24 ~~~~~~~~~~~v~~~l~~~-~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~ 102 (903)
T PRK15122 24 IAREAANSLEETLANLNTH-RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLP 102 (903)
T ss_pred HHHHHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 4578999999999999999 589999999999999999999998888999999999999999999999999998865421
Q ss_pred -C-CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC------CeEEEeecCCCCCCcEEEecC
Q 003909 81 -E-TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNV 152 (787)
Q Consensus 81 -~-~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~------g~~~~i~~~~Lv~GDII~l~~ 152 (787)
. .....|.++++++++++++..++.+++++++++++.|+++.+..++|+|| |++++|++++|||||+|.|++
T Consensus 103 ~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~ 182 (903)
T PRK15122 103 LRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSA 182 (903)
T ss_pred ccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECC
Confidence 1 11246889999999999999999999999999999999999999999999 489999999999999999999
Q ss_pred CCccccceeeeeecCCceEEecccccCCccccccccc----------cccccccCCCCCCceEeeccEEecceEEEEEEE
Q 003909 153 GCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELD----------SIIATNAVYQDKTNILFSGTVVVAGRARAVVVG 222 (787)
Q Consensus 153 G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~----------~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~ 222 (787)
||+|||||++++ ++.+.||||+|||||.|+.|.+. ..........+++|.+|+||.+.+|.+.++|++
T Consensus 183 Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~a 260 (903)
T PRK15122 183 GDMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVA 260 (903)
T ss_pred CCEEeeeEEEEE--cCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEE
Confidence 999999999997 45689999999999999999851 111123344567899999999999999999999
Q ss_pred ecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHh
Q 003909 223 VGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAA 302 (787)
Q Consensus 223 tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 302 (787)
||.+|.+|++.+.+.+ .+.++++++.++++..++..+.+.++.+++++..... ..+...+.+++++++++
T Consensus 261 tG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~---------~~~~~~l~~aisl~V~~ 330 (903)
T PRK15122 261 TGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK---------GDWLEALLFALAVAVGL 330 (903)
T ss_pred eccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------CCHHHHHHHHHHHHHHH
Confidence 9999999999998877 5667899999999988887776666655554432221 12345677889999999
Q ss_pred cCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCc
Q 003909 303 IPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGT 382 (787)
Q Consensus 303 ~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 382 (787)
|||+||++++++++.+..+|+|+|+++|+.+++|.||++|++|||||||||+|+|.|.+++..+..
T Consensus 331 ~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-------------- 396 (903)
T PRK15122 331 TPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-------------- 396 (903)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999987632110
Q ss_pred cccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhh
Q 003909 383 TYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALN 462 (787)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~ 462 (787)
....+..+ ..+++.. + ...+||+|.|++.++.+.+...
T Consensus 397 --------------------~~~~~l~~---a~l~s~~-----~-----~~~~~p~e~All~~a~~~~~~~--------- 434 (903)
T PRK15122 397 --------------------KDERVLQL---AWLNSFH-----Q-----SGMKNLMDQAVVAFAEGNPEIV--------- 434 (903)
T ss_pred --------------------ChHHHHHH---HHHhCCC-----C-----CCCCChHHHHHHHHHHHcCchh---------
Confidence 01112222 2222110 0 1147999999999988755311
Q ss_pred hhhhhccccccCccccccccEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHH
Q 003909 463 MLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRA 541 (787)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~ 541 (787)
....+..+..+||++.+++|+++++. ++++++++||+||.++++|+++.. +|...+++++.++
T Consensus 435 --------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~ 498 (903)
T PRK15122 435 --------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD--GDTVRPLDEARRE 498 (903)
T ss_pred --------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc--CCCeecCCHHHHH
Confidence 01245678899999999999999887 567889999999999999997653 4566788888889
Q ss_pred HHHHHHHHhhccccchhhhhhhccCCccccC--CCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCH
Q 003909 542 ELESRLNSLAGKEALRCLALALKQMPINRQT--LSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNK 619 (787)
Q Consensus 542 ~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~--~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~ 619 (787)
++.+..++++. +|+|++++|||.++..... .....|+|++|+|+++|+|++||+++++|++|+++||+++|+|||++
T Consensus 499 ~i~~~~~~~a~-~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~ 577 (903)
T PRK15122 499 RLLALAEAYNA-DGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNP 577 (903)
T ss_pred HHHHHHHHHHh-CCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCH
Confidence 99999999998 9999999999987643211 11123679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHH
Q 003909 620 STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699 (787)
Q Consensus 620 ~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ 699 (787)
.+|.++|+++||.. +.+++|.+++.+.++++...+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|
T Consensus 578 ~tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaP 651 (903)
T PRK15122 578 IVTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAP 651 (903)
T ss_pred HHHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHH
Confidence 99999999999963 357899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH
Q 003909 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAP 779 (787)
Q Consensus 700 ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~ 779 (787)
||++||||||||+|++.+|++||+|+.++++..|++++++||++++|+++++.|.++.|+..++.++++.++..+.|++|
T Consensus 652 ALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~ 731 (903)
T PRK15122 652 ALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLA 731 (903)
T ss_pred HHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888877789999
Q ss_pred hhhheecC
Q 003909 780 VSLISVNI 787 (787)
Q Consensus 780 ~~~l~~~l 787 (787)
+|+||+||
T Consensus 732 ~qil~~nl 739 (903)
T PRK15122 732 IHLLLQNL 739 (903)
T ss_pred HHHHHHHH
Confidence 99999996
No 9
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.2e-109 Score=975.35 Aligned_cols=713 Identities=38% Similarity=0.589 Sum_probs=612.5
Q ss_pred cccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCCCCCCcCccHHHHHHHHH-hHHHHHHHHHHHHHHHHHHhhc
Q 003909 2 EDAYARSVVEVLDFFGVDPTKGLT-DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQF-DDLLVKILIAAAVISFFLALIN 79 (787)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs-~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (787)
+.||..|++|+++.|++|+..||| ++|+++|+++||+|+++.++++++|+.++++| ++++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---- 77 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---- 77 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH----
Confidence 579999999999999999999999 99999999999999999988889999999999 999999999999988765
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccc
Q 003909 80 GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (787)
Q Consensus 80 ~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD 159 (787)
..|.++++++++++++..++.++++++++.+++|.+..+.+++|+|||++++|++++|||||+|.|++||+||||
T Consensus 78 -----g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaD 152 (884)
T TIGR01522 78 -----GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPAD 152 (884)
T ss_pred -----cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeee
Confidence 356778888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCCceEEecccccCCcccccccccccccc-ccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 160 MRMIEMLSNQLRVDQAILTGESCSVEKELDSIIAT-NAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 160 ~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~-~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
|++++ +..+.||||+|||||.|+.|.+++.... .....+++|++|+||.+.+|.+.++|++||.+|.+|++.+.+.+
T Consensus 153 g~ii~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 230 (884)
T TIGR01522 153 LRIVE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQA 230 (884)
T ss_pred EEEEE--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhcc
Confidence 99997 3468999999999999999988653221 12345678999999999999999999999999999999999988
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
++..++|+++.+++++.++.+++++++++.+++.+... ..+...+..++++++++|||+||++++++++.+
T Consensus 231 ~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~ 301 (884)
T TIGR01522 231 IEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG---------KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALG 301 (884)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 88889999999999999988776655554444432211 123456778899999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
.++|+++|+++|+.+++|.||++|++|||||||||+|+|.|.+++..+..... ..+..+.+.+....+.. ..
T Consensus 302 ~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~ 373 (884)
T TIGR01522 302 VLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-------LNAVSLNQFGEVIVDGD-VL 373 (884)
T ss_pred HHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-------ccCCccCCCCccccccc-cc
Confidence 99999999999999999999999999999999999999999999865432110 00111111111000000 00
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCcccc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (787)
.....+.+..+..++.+|+++..... .....|+|+|.|++.++++.|... ..
T Consensus 374 -~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~~~-----------------------~~ 425 (884)
T TIGR01522 374 -HGFYTVAVSRILEAGNLCNNAKFRNE----ADTLLGNPTDVALIELLMKFGLDD-----------------------LR 425 (884)
T ss_pred -ccccCHHHHHHHHHHhhhCCCeecCC----CCCcCCChHHHHHHHHHHHcCcHh-----------------------HH
Confidence 00122345567777888998754321 113358999999999998766421 01
Q ss_pred ccccEeEeecCCCCCceEEEEEee--CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccc
Q 003909 479 IEFKKVSILEFSRDRKMMSVLCSH--KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEAL 556 (787)
Q Consensus 479 ~~~~~l~~~~f~~~~~~~sviv~~--~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (787)
..++.+..+||++++|+|+++++. ++++++|+||+||.|+..|+++... +|...+++++.++.+.+..++++. +|+
T Consensus 426 ~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~-~G~ 503 (884)
T TIGR01522 426 ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK-DGKTLTLTQQQRDVIQEEAAEMAS-AGL 503 (884)
T ss_pred hhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhc-CCCeeeCCHHHHHHHHHHHHHHHh-cCC
Confidence 246778999999999999999876 5678999999999999999987654 466677888888889998999998 999
Q ss_pred hhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcc
Q 003909 557 RCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLV 636 (787)
Q Consensus 557 ~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~ 636 (787)
|++++||+.+ +.+++|+|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++|+....
T Consensus 504 rvl~~A~~~~-----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~- 571 (884)
T TIGR01522 504 RVIAFASGPE-----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT- 571 (884)
T ss_pred EEEEEEEEcC-----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-
Confidence 9999999865 3689999999999999999999999999999999999999999999999999997643
Q ss_pred ccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-CccH
Q 003909 637 DFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTA 715 (787)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~ 715 (787)
..+++|.+++.+.++++...+.+..+|+|++|++|.++++.+|+.|+.|+|+|||.||+||+++|||||||| ++++
T Consensus 572 ---~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~ 648 (884)
T TIGR01522 572 ---SQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTD 648 (884)
T ss_pred ---CceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCH
Confidence 346789999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred HHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 716 VAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 716 ~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.++++||+++.++++..+.+++++||+++.|+++++.|.++.|+..+++.+++.+++.|.||+|+|+||+||
T Consensus 649 va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl 720 (884)
T TIGR01522 649 VAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINI 720 (884)
T ss_pred HHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=8e-109 Score=978.83 Aligned_cols=713 Identities=34% Similarity=0.479 Sum_probs=601.8
Q ss_pred CHHHHHHHhCCCCCCCCC--HHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhc----CC
Q 003909 8 SVVEVLDFFGVDPTKGLT--DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALIN----GE 81 (787)
Q Consensus 8 ~~~~~~~~l~~~~~~GLs--~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 81 (787)
+++|+++.|++|+++||| ++||++|+++||+|+++.++++++|+.++++|+++++++++++++++++++.+. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999999999999 999999999999999999989999999999999999999999999998876542 12
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccce
Q 003909 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAY-QADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (787)
Q Consensus 82 ~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~-~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~ 160 (787)
.....|+++++++++++++..+..++++++++..+++.+. .+.+++|+|||++++|++++|||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2345788999988889999999999999999999999764 466899999999999999999999999999999999999
Q ss_pred eeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCC
Q 003909 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240 (787)
Q Consensus 161 ~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~ 240 (787)
++++ +..+.||||+|||||.|+.|.++ ..|++|+||.+.+|.+.++|++||.+|.+|++.+.+..++
T Consensus 203 ~li~--g~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~ 269 (941)
T TIGR01517 203 VFIS--GLSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG 269 (941)
T ss_pred EEEE--cCcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC
Confidence 9996 34899999999999999999864 2578999999999999999999999999999999887754
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC-CCCC-----cchhhHHHHHHHHHHHHHHhcCCchHHHHHH
Q 003909 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHF-RD-PSHG-----GFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (787)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-----~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~ 313 (787)
+++|+++.++++..++.+++++++++.++++...+ .. .+.. .....+...|..++++++++|||+||+++++
T Consensus 270 -~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti 348 (941)
T TIGR01517 270 -EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI 348 (941)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH
Confidence 56799999999999998888777777666553221 10 0000 0012455678889999999999999999999
Q ss_pred HHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccC
Q 003909 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDS 393 (787)
Q Consensus 314 ~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (787)
+++.+..+|+++|+++|+.+++|.||++|++|||||||||+|+|.|.+++..+...... + . ..
T Consensus 349 ~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~--------~-------~-~~- 411 (941)
T TIGR01517 349 ALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVR--------D-------V-LR- 411 (941)
T ss_pred HHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecC--------c-------c-cc-
Confidence 99999999999999999999999999999999999999999999999987643211100 0 0 00
Q ss_pred CCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhcccccc
Q 003909 394 SGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYC 473 (787)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 473 (787)
. ......++......|++.......+.+.....++|+|.|+++++++.|.+..
T Consensus 412 ---~-----~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~------------------- 464 (941)
T TIGR01517 412 ---N-----VPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ------------------- 464 (941)
T ss_pred ---c-----CCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-------------------
Confidence 0 0112333444444454432211111222345689999999999987664310
Q ss_pred CccccccccEeEeecCCCCCceEEEEEeeC-CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhc
Q 003909 474 NHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAG 552 (787)
Q Consensus 474 ~~~~~~~~~~l~~~~f~~~~~~~sviv~~~-~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (787)
.....++.+..+||++++|+|+++++.+ +++++++||+||.++++|+.+... +|...++++ .++.+.+.++++++
T Consensus 465 --~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~g~~~~~~~-~~~~i~~~~~~~a~ 540 (941)
T TIGR01517 465 --EVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDS-NGEATPISD-DKDRCADVIEPLAS 540 (941)
T ss_pred --HHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhc-CCCcccCcH-HHHHHHHHHHHHHh
Confidence 0112456678899999999999999875 458899999999999999876533 456566766 67888888999998
Q ss_pred cccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC
Q 003909 553 KEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (787)
Q Consensus 553 ~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~ 632 (787)
+|+|++++||+.++.++.......|+|++|+|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 541 -~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 541 -DALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred -cCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 9999999999988643322111226899999999999999999999999999999999999999999999999999997
Q ss_pred CCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-
Q 003909 633 DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG- 711 (787)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~- 711 (787)
... ..+++|.+++.+.++++...+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||||
T Consensus 620 ~~~----~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~ 695 (941)
T TIGR01517 620 TFG----GLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGI 695 (941)
T ss_pred CCC----ceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCC
Confidence 543 357889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 712 SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 712 ~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+|++.++++||+++.++++..|.+++++||+++.|+++++.|.+++|+..+++.+++.+++.|.|++|+|+||+||
T Consensus 696 ~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl 771 (941)
T TIGR01517 696 SGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNL 771 (941)
T ss_pred CccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999996
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.4e-104 Score=936.69 Aligned_cols=723 Identities=61% Similarity=0.926 Sum_probs=599.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhhc-CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC
Q 003909 53 VLKQFDDLLVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN 131 (787)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~ 131 (787)
+++||++++++++++++++++++++.. +......|+++++++++++++..++.++++|+++.+++|+++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 368999999999999999999887653 1223457999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEE
Q 003909 132 GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVV 211 (787)
Q Consensus 132 g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v 211 (787)
|++++|++++|||||+|.|++||+|||||++++ ++.+.||||+|||||.|+.|.++........+.+++|++|+||.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~--~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLS--LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEE--ecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 999999999999999999999999999999997 347999999999999999998764433334455678999999999
Q ss_pred ecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCcchhhHHH
Q 003909 212 VAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPS-HGGFLRGAIH 290 (787)
Q Consensus 212 ~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 290 (787)
.+|++.++|++||.+|.+|++.+.+..++.+++|+++.+++++.++..++++++++.|+++...+..+. ...|+..+..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 999999999999999999999999988888899999999999999988888877777766543322211 1234455556
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccc
Q 003909 291 YFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (787)
Q Consensus 291 ~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~ 370 (787)
.+..+++++++++|++||++++++++.+.++|+++++++|+.+++|.||++|++|||||||||+|+|+|.+++..+..+.
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 67778889999999999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred CcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcC
Q 003909 371 GPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVG 450 (787)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g 450 (787)
.. ...+..+..++|.+........ ......+....+..++++||++.+..+.+.+.....|+|+|.|++.++++.|
T Consensus 319 ~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 319 SL--NEFCVTGTTYAPEGGVIKDDGP--VAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred cc--ceEEecCCccCCCccccccCCc--ccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcC
Confidence 10 1222334444443321111000 0001234456778888999987654322222233468999999999999988
Q ss_pred CCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCC
Q 003909 451 LPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNG 530 (787)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~ 530 (787)
+......+..+...... ....+...|+++..+||+|+||+|||+++.++++.+|+||+||.|++.|++++.+ +|
T Consensus 395 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~-~g 468 (917)
T TIGR01116 395 LPATKNGVSSKRRPALG-----CNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNG-DG 468 (917)
T ss_pred CCchhcccccccccccc-----hhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecC-CC
Confidence 76542211111110000 0011234678899999999999999999988888999999999999999987755 56
Q ss_pred ccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccC------CC-CCCCCCcEEEEEeccCCCCChhHHHHHHH
Q 003909 531 FIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT------LS-YDDEKDLTFIGLVGMLDPPREEVKNAMLS 603 (787)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~------~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~ 603 (787)
...+++++.++++.+.++++++++|+||+++|||.++.+... .. ...|+|++|+|+++++||+|++++++|++
T Consensus 469 ~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~ 548 (917)
T TIGR01116 469 RAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEK 548 (917)
T ss_pred CeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHH
Confidence 778899999999999999998558999999999998643211 01 11278999999999999999999999999
Q ss_pred HHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhh
Q 003909 604 CMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN 683 (787)
Q Consensus 604 l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 683 (787)
|+++|++++|+|||+..+|.++|+++|+...........++|.+++.+.+++......+..||+|++|+||.++++.+|+
T Consensus 549 l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 628 (917)
T TIGR01116 549 CRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE 628 (917)
T ss_pred HHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999997643332334678888888888888888888899999999999999999999
Q ss_pred CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 684 QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763 (787)
Q Consensus 684 ~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~ 763 (787)
.|+.|+|+|||.||++||++|||||||++|++.+|++||+++.++++..+.+++++||+++.|+++++.|.++.|+..++
T Consensus 629 ~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 629 QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred cCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHhhhheecC
Q 003909 764 CIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 764 ~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+.+++.+++.|.||+|+|++|+|+
T Consensus 709 ~~~~~~~~~~~~pl~~~qll~inl 732 (917)
T TIGR01116 709 CIFLTAALGIPEGLIPVQLLWVNL 732 (917)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHH
Confidence 999999999999999999999995
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.7e-103 Score=909.88 Aligned_cols=633 Identities=32% Similarity=0.481 Sum_probs=547.0
Q ss_pred CCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHH
Q 003909 23 GLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAA 102 (787)
Q Consensus 23 GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 102 (787)
|||++||++|+++||+|+++.++ +++|+.|+++|++++.+++++++++++++ +.|.++++++++++++..
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~---------~~~~~~~~i~~~~~i~~~ 70 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIAL---------ENWVDFVIILGLLLLNAT 70 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------cchhhhhhhhhhhHHHHH
Confidence 89999999999999999999854 46789999999999999999998888765 357788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCcc
Q 003909 103 VGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESC 182 (787)
Q Consensus 103 l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~ 182 (787)
+++++++++++.++.|+++.+.+++|+|||++++|++++|||||+|.|++||+|||||++++ +..+.||||+|||||.
T Consensus 71 i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~--g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 71 IGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe--cCceEEEcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999996 3348999999999999
Q ss_pred ccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHH
Q 003909 183 SVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIA 262 (787)
Q Consensus 183 pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (787)
|+.|.+ +|.+|+||.+.+|.+.++|++||.+|.+|++.+.+.+++.+++++++.+++++.+++++++
T Consensus 149 PV~K~~-------------~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~ 215 (755)
T TIGR01647 149 PVTKKT-------------GDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIG 215 (755)
T ss_pred ceEecc-------------CCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999986 5679999999999999999999999999999999988888889999999999999999888
Q ss_pred HHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCee
Q 003909 263 GICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTT 342 (787)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~ 342 (787)
+++++.+++++.... ..+...+.+++++++++|||+||++++++++.+.++|+|+|+++|+.+++|.||.+|
T Consensus 216 ~~~~i~~~~~~~~~~--------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~ 287 (755)
T TIGR01647 216 VLVLIELVVLFFGRG--------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMD 287 (755)
T ss_pred HHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCc
Confidence 888887776654221 123456778899999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccc
Q 003909 343 VICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVL 422 (787)
Q Consensus 343 ~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 422 (787)
++|||||||||+|+|.|.+++..+... .... +.....+|++.
T Consensus 288 ~i~~DKTGTLT~~~~~v~~~~~~~~~~---------------------------------~~~~---~l~~a~~~~~~-- 329 (755)
T TIGR01647 288 ILCSDKTGTLTLNKLSIDEILPFFNGF---------------------------------DKDD---VLLYAALASRE-- 329 (755)
T ss_pred EEEecCCCccccCceEEEEEEecCCCC---------------------------------CHHH---HHHHHHHhCCC--
Confidence 999999999999999999987542100 0111 22233344321
Q ss_pred cccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEee
Q 003909 423 QYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH 502 (787)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~ 502 (787)
..+||+|.|+++++++.+. ....++.+..+||++.+|+|+++++.
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~-------------------------~~~~~~~~~~~pf~~~~k~~~~~v~~ 374 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE-------------------------ARDGYKVLEFVPFDPVDKRTEATVED 374 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH-------------------------HHhcCceEEEeccCCCCCeEEEEEEe
Confidence 1359999999998764320 01245677889999999999998876
Q ss_pred C--CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCC
Q 003909 503 K--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKD 580 (787)
Q Consensus 503 ~--~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~ 580 (787)
+ ++.++++||+||.+++.|++. ...++++.+.+++++. +|+|++++|++. .|.+
T Consensus 375 ~~~g~~~~~~kGa~e~il~~c~~~------------~~~~~~~~~~~~~~~~-~G~rvl~vA~~~-----------~e~~ 430 (755)
T TIGR01647 375 PETGKRFKVTKGAPQVILDLCDNK------------KEIEEKVEEKVDELAS-RGYRALGVARTD-----------EEGR 430 (755)
T ss_pred CCCceEEEEEeCChHHHHHhcCCc------------HHHHHHHHHHHHHHHh-CCCEEEEEEEEc-----------CCCC
Confidence 3 667789999999999999641 2345667777888887 999999999872 1578
Q ss_pred cEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh
Q 003909 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 581 l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
++|+|+++|+|++||+++++|++|+++|++++|+|||++.+|+++|+++||..... .......+.+.+.+.++++.+.+
T Consensus 431 l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~-~~~~l~~~~~~~~~~~~~~~~~~ 509 (755)
T TIGR01647 431 WHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIY-TADVLLKGDNRDDLPSGELGEMV 509 (755)
T ss_pred cEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc-CHHHhcCCcchhhCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999975321 11122344455667777888888
Q ss_pred ccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHH
Q 003909 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~g 740 (787)
.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|+|++|||||||++|++.+|++||+|+.++++..|.+++++|
T Consensus 510 ~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~g 589 (755)
T TIGR01647 510 EDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILES 589 (755)
T ss_pred HhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 741 RAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 741 R~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
|++++|+++++.|.++.|+..+++.+++.++ ++.||+|+|+||+||
T Consensus 590 R~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~~~~il~~~l 635 (755)
T TIGR01647 590 RKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFPPIMVVIIAI 635 (755)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchhHHHHHHHHH
Confidence 9999999999999999999888766665542 334599999999986
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=6.8e-99 Score=901.86 Aligned_cols=690 Identities=23% Similarity=0.306 Sum_probs=540.4
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHH
Q 003909 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (787)
Q Consensus 21 ~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 100 (787)
..|||++|+.+|++.||+|+++.+. +++|++++++|.++++++++++.+++++. .+|+++++++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~---------~~~~~~~~i~~i~~~~ 206 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD---------EYYYYSLCIVFMSSTS 206 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHH
Confidence 5799999999999999999999865 68999999999999998887764444321 4677888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEec--CCCccccceeeeeecCCceEEeccccc
Q 003909 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVN--VGCKIPADMRMIEMLSNQLRVDQAILT 178 (787)
Q Consensus 101 ~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~--~G~~vPaD~~il~~~~g~~~vdes~lt 178 (787)
..+..++++|+.+.++++.. .+..++|+|||+|++|++++|||||||.|+ +|++|||||+|++ |+|.||||+||
T Consensus 207 ~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~VdES~LT 282 (1054)
T TIGR01657 207 ISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEeccccc
Confidence 99999999999988888754 456899999999999999999999999999 9999999999996 68999999999
Q ss_pred CCcccccccccccc--c---cccCCCCCCceEeeccEEec-------ceEEEEEEEecchhhhhHHHHHhccCCCCCCch
Q 003909 179 GESCSVEKELDSII--A---TNAVYQDKTNILFSGTVVVA-------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPL 246 (787)
Q Consensus 179 GEs~pv~k~~~~~~--~---~~~~~~~~~~~l~~Gt~v~~-------g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~ 246 (787)
|||.|+.|.+.+.. . ......+++|++|+||.+++ |.+.++|++||.+|..|++.+.+...+...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999875321 1 01123467899999999985 789999999999999999999998887788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhcc
Q 003909 247 KKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLN 326 (787)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~ 326 (787)
++...++...+..++++..++.++... .. . ..+...+..+++++++++|++||++++++++.+..||+|++
T Consensus 363 ~~~~~~~~~~l~~~a~i~~i~~~~~~~-~~-~-------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~ 433 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALIGFIYTIIELI-KD-G-------RPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKG 433 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc-C-------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCC
Confidence 888777765554433332222222111 11 1 13456677889999999999999999999999999999999
Q ss_pred ccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhH
Q 003909 327 AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (787)
Q Consensus 327 i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (787)
++|+++.++|.+|++|++|||||||||+|+|.|.+++..+...... .. .... ....
T Consensus 434 il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~--------~~-------~~~~---------~~~~ 489 (1054)
T TIGR01657 434 IFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL--------KI-------VTED---------SSLK 489 (1054)
T ss_pred EEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc--------cc-------cccc---------cccC
Confidence 9999999999999999999999999999999999998654211100 00 0000 0011
Q ss_pred HHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEe
Q 003909 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSI 486 (787)
Q Consensus 407 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 486 (787)
...+..+++.||+.... ++ ...|||.|.|+++++ |+............. ...... .......+++++.
T Consensus 490 ~~~~~~~~a~C~~~~~~----~~--~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~--~~~~i~-~~~~~~~~~il~~ 557 (1054)
T TIGR01657 490 PSITHKALATCHSLTKL----EG--KLVGDPLDKKMFEAT---GWTLEEDDESAEPTS--ILAVVR-TDDPPQELSIIRR 557 (1054)
T ss_pred chHHHHHHHhCCeeEEE----CC--EEecCHHHHHHHHhC---CCEEECCCCcccccc--ccccee-ccCCCceEEEEEE
Confidence 22345567789976432 11 467999999999875 222111000000000 000000 0011246889999
Q ss_pred ecCCCCCceEEEEEeeC--CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhc
Q 003909 487 LEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (787)
Q Consensus 487 ~~f~~~~~~~sviv~~~--~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~ 564 (787)
+||+|++|||||+++.+ +++++|+||+||.|+++|++.. .++.+.+.+++|+. +|+||+++|||
T Consensus 558 ~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~-------------~p~~~~~~~~~~a~-~G~RVLalA~k 623 (1054)
T TIGR01657 558 FQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET-------------VPSDYQEVLKSYTR-EGYRVLALAYK 623 (1054)
T ss_pred EeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC-------------CChhHHHHHHHHHh-cCCEEEEEEEe
Confidence 99999999999999874 4578999999999999997411 12456677888988 99999999999
Q ss_pred cCCcccc----CCC-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc--
Q 003909 565 QMPINRQ----TLS-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD-- 637 (787)
Q Consensus 565 ~~~~~~~----~~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~-- 637 (787)
+++.... ... .+.|+|++|+|+++|+|++||+++++|++|+++||+++|+|||++.+|.++|+++||......
T Consensus 624 ~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi 703 (1054)
T TIGR01657 624 ELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLI 703 (1054)
T ss_pred ecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEE
Confidence 9863210 111 122789999999999999999999999999999999999999999999999999999643210
Q ss_pred -------------------c----------------------------ccccccchhhcc---CChHHHHHhhccceEEE
Q 003909 638 -------------------F----------------------------VGRSYTASEFEE---LPAMQQTVALQHMALFT 667 (787)
Q Consensus 638 -------------------~----------------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~ 667 (787)
. ...+++|++++. ..++++...+.+..|||
T Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfA 783 (1054)
T TIGR01657 704 LAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFA 783 (1054)
T ss_pred EeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEE
Confidence 0 013445555543 23345666777889999
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHH
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNT 747 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i 747 (787)
|++|+||.++|+.+|+.|+.|+|+|||.||++|||+|||||||+++. +..+||+++.++++.+|.++|++||+++.++
T Consensus 784 R~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d--as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~ 861 (1054)
T TIGR01657 784 RMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIREGRCALVTS 861 (1054)
T ss_pred ecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecccc--ceeecccccCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998652 4578999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 748 KQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 748 ~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+++++|.+.+++..++..++..+ .+.|++++|+||+|+
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~l~~--~~~~l~~~Q~l~i~l 899 (1054)
T TIGR01657 862 FQMFKYMALYSLIQFYSVSILYL--IGSNLGDGQFLTIDL 899 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--ccCcCccHHHHHHHH
Confidence 99999999999887666654444 447799999999985
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-97 Score=791.27 Aligned_cols=729 Identities=33% Similarity=0.496 Sum_probs=624.4
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCC-
Q 003909 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE- 81 (787)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (787)
++|.+|++|+.+++++|..+|||.++|.+++++.|||.+++|+..+=|..|.+|++..+.++++++++++++.+.+...
T Consensus 38 ~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 38 DDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 4799999999999999999999999999999999999999999988899999999999999999999999877766422
Q ss_pred ---CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCcccc
Q 003909 82 ---TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (787)
Q Consensus 82 ---~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPa 158 (787)
.+....+.++++..++++......+++.+..+.++.+.++.|..+.|+|||+...+..++||+||++.++-|++|||
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPA 197 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPA 197 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccc
Confidence 12334445566666777777888999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 159 D~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
|.++++ +..++||+|++||||.|..+.+.... ..+..+.|+-|.+|.+++|.+.++|++||.+|.+|++......
T Consensus 198 DiRiis--~~g~~vdnsslTGesEP~~~~~~~t~---~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~ 272 (1019)
T KOG0203|consen 198 DIRIIS--ATGCKVDNSSLTGESEPQTRSPEFTH---ENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASG 272 (1019)
T ss_pred eeEEEE--ecceeEeccccccccCCccCCccccc---cCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhcc
Confidence 999997 67799999999999999998775443 3337789999999999999999999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
.+..++|+++.+++|..++..+++++.+.+|++..... ..+...+.+.+.++++.+|.+|+..++..+..-
T Consensus 273 ~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g---------y~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlt 343 (1019)
T KOG0203|consen 273 LEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG---------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLT 343 (1019)
T ss_pred CCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc---------chhHHHhhhhheeEEecCcCCccceehhhHHHH
Confidence 88899999999999999988888887777776654332 134455666888999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
.+||+++++++|+.++.|.||..+++|.|||||||+|+|.|.+++..+...... .. . +....
T Consensus 344 akrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d------~~---~---------~~~~~ 405 (1019)
T KOG0203|consen 344 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEAD------TT---E---------DQSGQ 405 (1019)
T ss_pred HHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeee------ch---h---------hhhcc
Confidence 999999999999999999999999999999999999999999999765433211 00 0 00011
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
......+.+..+..|+.+||.+.+.....+ ......|++.|.||++|++-.--.. .
T Consensus 406 ~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~---------------------~ 464 (1019)
T KOG0203|consen 406 SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV---------------------M 464 (1019)
T ss_pred cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH---------------------H
Confidence 112235667788999999999876532221 1234568999999999987432110 0
Q ss_pred cccccccEeEeecCCCCCceEEEEEeeC----CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhh
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK----QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~~----~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (787)
....++.++..+||+|.+|..-.+-..+ .+..+.+||+||.++++|+.+..+ |...|++++.++.+.....+++
T Consensus 465 ~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~--g~e~pld~~~~~~f~~ay~~lg 542 (1019)
T KOG0203|consen 465 ELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILIN--GEEKPLDEKLKEAFQEAYLELG 542 (1019)
T ss_pred HHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeec--CCCCCcCHHHHHHHHHHHHHhh
Confidence 1234567788999999999876655433 367788999999999999998886 7788999999999999999999
Q ss_pred ccccchhhhhhhccCCccccCCCCCC--------CCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 552 GKEALRCLALALKQMPINRQTLSYDD--------EKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 552 ~~~g~~~l~~a~~~~~~~~~~~~~~~--------e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
+ .|.||++|+++.++.++....+.. -.++.|+|++++-||+|+.+++|+.+||.+||+|+|+|||++.+|+
T Consensus 543 ~-~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAk 621 (1019)
T KOG0203|consen 543 G-LGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 621 (1019)
T ss_pred h-cchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhh
Confidence 8 999999999999986543322211 4689999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCccc--------------------cccccccchhhccCChHHHHHhhcc--ceEEEecChhhHHHHHHHH
Q 003909 624 SICHKIGAFDHLVD--------------------FVGRSYTASEFEELPAMQQTVALQH--MALFTRVEPSHKRMLVEAL 681 (787)
Q Consensus 624 ~~a~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~p~~K~~~v~~l 681 (787)
++|++.||...... ....+++|.++..+..++..+.+.+ ..||||.+|+||..+|+.+
T Consensus 622 AiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~c 701 (1019)
T KOG0203|consen 622 AIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGC 701 (1019)
T ss_pred hhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhh
Confidence 99999997653321 1234678899999999999888873 4799999999999999999
Q ss_pred hhCCCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (787)
Q Consensus 682 ~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 760 (787)
|+.|..|+++|||.||.||||.|||||||| .|++.+|++||+|++|+++.+|+..+++||.+++|+||.+.|.++.|+.
T Consensus 702 Qr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNip 781 (1019)
T KOG0203|consen 702 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 781 (1019)
T ss_pred hhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcch
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.+.+++++.++|+|.|+.++++|.++|
T Consensus 782 EI~PfL~fi~~giPLplgtitIL~IDL 808 (1019)
T KOG0203|consen 782 EITPFLLFILFGIPLPLGTVTILCIDL 808 (1019)
T ss_pred hHhHHHHHHHhCCCcccchhhhhhhHh
Confidence 999999999999999999999999876
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=6.5e-89 Score=818.88 Aligned_cols=721 Identities=22% Similarity=0.251 Sum_probs=538.2
Q ss_pred cCCCCCCCCcCccH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 36 YGKNVLPQEKRTAF---WKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAE 112 (787)
Q Consensus 36 ~g~N~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~ 112 (787)
|.+|.+.+.|++.| ++.+++||+++.+++++++++++++..+.. . +... ..++++++++++...+.+.+++..
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~-~-~~~t--~~~pL~~v~~~~~~~~~~ed~~r~ 76 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSP-T-YRGT--SIVPLAFVLIVTAIKEAIEDIRRR 76 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCC-C-CccH--hHHhHHHHHHHHHHHHHHHHHHHH
Confidence 57899999888765 799999999999999999999988764432 1 1122 223333444455555556666555
Q ss_pred HHHHHHHhcCCCeeEEEeC-CeEEEeecCCCCCCcEEEecCCCccccceeeeeecC--CceEEecccccCCccccccccc
Q 003909 113 KALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (787)
Q Consensus 113 ~~~~~l~~~~~~~~~v~r~-g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~--g~~~vdes~ltGEs~pv~k~~~ 189 (787)
++-+. .+...++|+|+ |++++++|++|+|||+|.|++||+||||++++++++ |.|+||||+||||+.|+.|.+.
T Consensus 77 ~~d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 77 RRDKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HhHHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 54443 34568999997 899999999999999999999999999999997554 7899999999999999999764
Q ss_pred cccc-------------------c----------------ccCCCCCCceEeeccEEec-ceEEEEEEEecchhhhhHHH
Q 003909 190 SIIA-------------------T----------------NAVYQDKTNILFSGTVVVA-GRARAVVVGVGANTAMGSIR 233 (787)
Q Consensus 190 ~~~~-------------------~----------------~~~~~~~~~~l~~Gt~v~~-g~~~~~V~~tg~~T~~~~i~ 233 (787)
.... + ...+.+.+|++++||.+.+ |+++|+|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 3210 0 1124456799999999998 999999999999997755
Q ss_pred HHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----CCC-------CcchhhHHHHHHHHHHHHHHh
Q 003909 234 DSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD----PSH-------GGFLRGAIHYFKIAVALAVAA 302 (787)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~i~~l~~~ 302 (787)
+....+.+++++++.++++..+++.+.+++|++++++...+... .|+ ..+...++..|..++.++..+
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhh
Confidence 34455667899999999999888888888887777765433211 111 011123444667788889999
Q ss_pred cCCchHHHHHHHHHHHH------HHhhhc----cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCc
Q 003909 303 IPEGLPAVVTTCLALGT------KRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGP 372 (787)
Q Consensus 303 ~P~~l~~~~~~~~~~~~------~~l~~~----~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~ 372 (787)
+|.+|++.++++...+. .+|.++ ++.+|+.+..|+||++++||+|||||||+|+|.++++++.+..+...
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999998 677764 59999999999999999999999999999999999999876544321
Q ss_pred ceeEEe--ecCcc-ccC-------CC--ccccCCC-c-cc-cCCCChhHHHHHHHHhhhcccccccccCCC--CCceecc
Q 003909 373 IIAEYG--VTGTT-YAP-------EG--VVFDSSG-I-QL-EFPAQLPCLLHIARCSALCNESVLQYNPDK--GNYEKIG 435 (787)
Q Consensus 373 ~~~~~~--~~~~~-~~~-------~~--~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~ 435 (787)
...... ..... +.+ +. ..+.+.. . .. ......+.+..+..++++||++....+.+. ...+..+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~ 470 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAA 470 (1057)
T ss_pred cchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEcc
Confidence 000000 00000 000 00 0000000 0 00 000122346678889999998866531221 1345578
Q ss_pred ChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeC-CeeEEEEeCCh
Q 003909 436 EATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAP 514 (787)
Q Consensus 436 ~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~-~~~~~~~kG~~ 514 (787)
+|+|.|++++++..|+....+++..+... .........|+++..+||+|+||||||+++++ +++++|+||+|
T Consensus 471 sp~E~ALl~~a~~~g~~~~~~~~~~~~~~-------i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~ 543 (1057)
T TIGR01652 471 SPDEAALVKAARDVGFVFFERTPKSISLL-------IEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGAD 543 (1057)
T ss_pred CCcHHHHHHHHHHCCCEEEEecCCceEEE-------EEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcH
Confidence 99999999999999987654433211110 00111235789999999999999999999975 46889999999
Q ss_pred HHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCC---------------------
Q 003909 515 ESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTL--------------------- 573 (787)
Q Consensus 515 e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~--------------------- 573 (787)
|.|+++|... ++..++.+.+.+++|+. +|+||+++|+|.++.++...
T Consensus 544 e~il~~~~~~-----------~~~~~~~~~~~~~~~a~-~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 611 (1057)
T TIGR01652 544 TVIFKRLSSG-----------GNQVNEETKEHLENYAS-EGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDV 611 (1057)
T ss_pred HHHHHHhhcc-----------chhHHHHHHHHHHHHHH-cCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 9999999631 23456678888999998 99999999999987532100
Q ss_pred -CCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc--------------
Q 003909 574 -SYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF-------------- 638 (787)
Q Consensus 574 -~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~-------------- 638 (787)
..+.|+|++|+|+++++|++|++++++|+.|+++||++||+|||+.++|..+|+++|+.......
T Consensus 612 ~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~ 691 (1057)
T TIGR01652 612 VAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV 691 (1057)
T ss_pred HHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH
Confidence 01127899999999999999999999999999999999999999999999999999997643210
Q ss_pred -----------------------ccccccchhhccCChHH----HHHhhc--cceEEEecChhhHHHHHHHHhhC-CCEE
Q 003909 639 -----------------------VGRSYTASEFEELPAMQ----QTVALQ--HMALFTRVEPSHKRMLVEALQNQ-NEVV 688 (787)
Q Consensus 639 -----------------------~~~~~~~~~~~~~~~~~----~~~~~~--~~~v~~~~~p~~K~~~v~~l~~~-~~~v 688 (787)
...+++|+.++.+.+.+ +..... +..||||++|+||.++|+.+|+. |+.|
T Consensus 692 ~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~v 771 (1057)
T TIGR01652 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771 (1057)
T ss_pred HHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeE
Confidence 01245565554333222 222222 34599999999999999999998 9999
Q ss_pred EEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 689 AMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAV-AEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (787)
Q Consensus 689 ~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~~~~~l~~n~~~~~~~~ 766 (787)
+|+|||.||++||++|||||++. ....+++.+||+++.+ +..+..++ .|||+++.|+++.+.|.++.|+...++.+
T Consensus 772 l~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~ 849 (1057)
T TIGR01652 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849 (1057)
T ss_pred EEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999984 3334789999999975 88999887 89999999999999999999999999888
Q ss_pred HHHHhcCC---CchhHhhhheecC
Q 003909 767 VAAVLGIP---DTLAPVSLISVNI 787 (787)
Q Consensus 767 ~~~~~~~~---~~l~~~~~l~~~l 787 (787)
++.++..+ +++.+++++|.|+
T Consensus 850 ~~~~~~~~s~~~~~~~~~l~~~n~ 873 (1057)
T TIGR01652 850 WYSFYNGFSGQTLYEGWYMVLYNV 873 (1057)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHH
Confidence 88777544 4688889999884
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.6e-85 Score=732.30 Aligned_cols=561 Identities=23% Similarity=0.324 Sum_probs=449.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHhhcC---CCCcccchhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCC-ee
Q 003909 55 KQFDDLLVKILIAAAVISFFLALING---ETGLTAFLEPSVILLILAANAAVGVIT----ETNAEKALEELRAYQAD-IA 126 (787)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~il~~~~~~~~l~~~~----~~~~~~~~~~l~~~~~~-~~ 126 (787)
.+|+++..++++++++++++++.+.. ..++ ..++++.++++++++.+++.++ ++|+++.++.|++..++ ++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 35678999999999999998877632 1111 1133444555555555555544 78999999999998876 67
Q ss_pred E-EEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceE
Q 003909 127 T-VLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNIL 205 (787)
Q Consensus 127 ~-v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l 205 (787)
+ |.|||++++|++++|+|||+|.+++||+|||||++++ |...||||+|||||.|+.|.++. + .+.+
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~---------d-~~~V 173 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG---------D-FDNV 173 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC---------c-cCee
Confidence 5 7799999999999999999999999999999999996 56799999999999999998751 1 1349
Q ss_pred eeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcch
Q 003909 206 FSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFL 285 (787)
Q Consensus 206 ~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (787)
|+||.+.+|++.++|+++|.+|.+|++.+++..++++++|++.....+...++ ++++++++++..+..+.
T Consensus 174 ~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~--ii~l~~~~~~~~~~~~~-------- 243 (673)
T PRK14010 174 IGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT--IIFLVVILTMYPLAKFL-------- 243 (673)
T ss_pred ecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh--HHHHHHHHHHHHHHhhc--------
Confidence 99999999999999999999999999999999998899999876554433222 22222222221111110
Q ss_pred hhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEe
Q 003909 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (787)
Q Consensus 286 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~ 365 (787)
.+...+.+.++++++++||+|+..++++...++.+++|+|+++|+.+++|.+|++|++|||||||||+|++.+.++...
T Consensus 244 -~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~ 322 (673)
T PRK14010 244 -NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPV 322 (673)
T ss_pred -cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeC
Confidence 1123456677788888999999999999999999999999999999999999999999999999999988887775432
Q ss_pred cccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHH
Q 003909 366 HSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVL 445 (787)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 445 (787)
++ ....++.....+|+.. ..||.+.|++++
T Consensus 323 ~~-------------------------------------~~~~~ll~~a~~~~~~-------------s~~P~~~AIv~~ 352 (673)
T PRK14010 323 KS-------------------------------------SSFERLVKAAYESSIA-------------DDTPEGRSIVKL 352 (673)
T ss_pred CC-------------------------------------ccHHHHHHHHHHhcCC-------------CCChHHHHHHHH
Confidence 11 0112233444456532 138999999999
Q ss_pred HHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhccccc
Q 003909 446 AEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNIL 525 (787)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~ 525 (787)
+++.++... ......+||++++|+|++.++ ++ .+.||+++.+++.|+.
T Consensus 353 a~~~~~~~~--------------------------~~~~~~~pF~~~~k~~gv~~~--g~--~i~kGa~~~il~~~~~-- 400 (673)
T PRK14010 353 AYKQHIDLP--------------------------QEVGEYIPFTAETRMSGVKFT--TR--EVYKGAPNSMVKRVKE-- 400 (673)
T ss_pred HHHcCCCch--------------------------hhhcceeccccccceeEEEEC--CE--EEEECCHHHHHHHhhh--
Confidence 987654320 001124799999999998753 32 4569999999999974
Q ss_pred ccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHH
Q 003909 526 CNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCM 605 (787)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~ 605 (787)
+|...+. .+.+..++++. +|+|+++++ .|++++|+++++|++||+++++|++||
T Consensus 401 ---~g~~~~~------~~~~~~~~~a~-~G~~~l~v~----------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr 454 (673)
T PRK14010 401 ---AGGHIPV------DLDALVKGVSK-KGGTPLVVL----------------EDNEILGVIYLKDVIKDGLVERFRELR 454 (673)
T ss_pred ---cCCCCch------HHHHHHHHHHh-CCCeEEEEE----------------ECCEEEEEEEeecCCcHHHHHHHHHHH
Confidence 1211111 24445566776 899988765 377899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCC
Q 003909 606 TAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQN 685 (787)
Q Consensus 606 ~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 685 (787)
++|++++|+|||++.+|.++|+++|++. +|+|++|+||.++|+.+|++|
T Consensus 455 ~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------------------v~A~~~PedK~~iV~~lQ~~G 503 (673)
T PRK14010 455 EMGIETVMCTGDNELTAATIAKEAGVDR-------------------------------FVAECKPEDKINVIREEQAKG 503 (673)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------EEcCCCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999976 899999999999999999999
Q ss_pred CEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 686 EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (787)
Q Consensus 686 ~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~ 765 (787)
+.|+|+|||.||+|+|++||||||||+|++.+|++||+|+.++|+..+.+++++||+++.|+++++.|.++.|+...+.+
T Consensus 504 ~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i 583 (673)
T PRK14010 504 HIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAI 583 (673)
T ss_pred CEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhcCCCchhH
Q 003909 766 FVAAVLGIPDTLAP 779 (787)
Q Consensus 766 ~~~~~~~~~~~l~~ 779 (787)
+.+.|....+.+..
T Consensus 584 ~~a~~~~~~~~~~~ 597 (673)
T PRK14010 584 LPAMFMAAMPAMNH 597 (673)
T ss_pred HHHHHHHhcccchh
Confidence 88777655444443
No 17
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-86 Score=714.25 Aligned_cols=707 Identities=24% Similarity=0.329 Sum_probs=521.5
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHH
Q 003909 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (787)
Q Consensus 21 ~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 100 (787)
.+||+.+++.+|+..||+|.+..+. ++++.++.++.-+++..+.. +++++|... .+++.+.+|+++..++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~----fSv~lW~~d-----~Y~~YA~cI~iisv~S 227 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQA----FSVALWLAD-----SYYYYAFCIVIISVYS 227 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHh----HHhhhhhcc-----cchhhhhHHHHHHHHH
Confidence 7899999999999999999999865 47899999988888776554 444444332 4556678888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecC-CCccccceeeeeecCCceEEecccccC
Q 003909 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNV-GCKIPADMRMIEMLSNQLRVDQAILTG 179 (787)
Q Consensus 101 ~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~-G~~vPaD~~il~~~~g~~~vdes~ltG 179 (787)
..+..+..++..+.++++-+.. ..|+|+|+|.|++|.++|||||||+.+.+ |-..|||++++ +|+|.||||+|||
T Consensus 228 i~~sv~e~r~qs~rlr~mv~~~-~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNEsmLTG 303 (1140)
T KOG0208|consen 228 IVLSVYETRKQSIRLRSMVKFT-CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE---eCcEEeecccccC
Confidence 9999999888888888876543 46899999999999999999999999988 99999999999 5999999999999
Q ss_pred Cccccccccccccc------cccCCCCCCceEeeccEEec------ceEEEEEEEecchhhhhHHHHHhccCCCCCCchH
Q 003909 180 ESCSVEKELDSIIA------TNAVYQDKTNILFSGTVVVA------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLK 247 (787)
Q Consensus 180 Es~pv~k~~~~~~~------~~~~~~~~~~~l~~Gt~v~~------g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~ 247 (787)
||.|+.|.+.+... ......+.+|++|+||.+++ +.+.++|++||.+|..|++.+++..++....++.
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfy 383 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFY 383 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHH
Confidence 99999999865211 12334467899999999985 7899999999999999999999999754444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccc
Q 003909 248 KKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNA 327 (787)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i 327 (787)
+... .++..+.+++++.+++....... .+ ...-..++.++.++...+|+|||.++++....+..||.|+||
T Consensus 384 rds~----~fi~~l~~ia~~gfiy~~i~l~~---~g--~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~I 454 (1140)
T KOG0208|consen 384 RDSF----KFILFLVIIALIGFIYTAIVLNL---LG--VPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGI 454 (1140)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHhHhHHH---cC--CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCe
Confidence 3333 33333444444444443322210 00 112345778899999999999999999999999999999999
Q ss_pred cccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccc-cCcceeEEeecCccccCCCccccCCCccccCCCChhH
Q 003909 328 IVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQ-QGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (787)
Q Consensus 328 ~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (787)
+|-+++++...|++|++|||||||||++.+.+-++....+.. .++..... ......... ++........
T Consensus 455 fCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~------~~~~~~~~~----~l~~~~~~~~ 524 (1140)
T KOG0208|consen 455 FCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVV------TEDSLQLFY----KLSLRSSSLP 524 (1140)
T ss_pred EEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhh------hhhhcccee----eccccccCCc
Confidence 999999999999999999999999999999999988754321 11100000 000000000 0000001111
Q ss_pred HHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCC--ch---hh-----hhhhhhhcc-ccccCc
Q 003909 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDS--MP---SA-----LNMLSKHER-ASYCNH 475 (787)
Q Consensus 407 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~--~~---~~-----~~~~~~~~~-~~~~~~ 475 (787)
...+..+.+-||.-... .....|||.|..+.+. .|+...+. .+ .. ...+.+... .....+
T Consensus 525 ~~~~~~a~atCHSL~~v------~g~l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~ 595 (1140)
T KOG0208|consen 525 MGNLVAAMATCHSLTLV------DGTLVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTE 595 (1140)
T ss_pred hHHHHHHHhhhceeEEe------CCeeccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCCCc
Confidence 23456666777743321 1233467776655533 33333211 00 00 001111110 001111
Q ss_pred cccccccEeEeecCCCCCceEEEEEeeC--CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhcc
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~~--~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (787)
.....+.+++.+||+|..+||||||+.+ .+..+|+||+||.|.+.|++... | ..+++.++.|+.
T Consensus 596 ~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tv-------P------~dy~evl~~Yt~- 661 (1140)
T KOG0208|consen 596 CGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETV-------P------ADYQEVLKEYTH- 661 (1140)
T ss_pred CCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccC-------C------ccHHHHHHHHHh-
Confidence 1223688999999999999999999987 56789999999999999976332 2 337788899998
Q ss_pred ccchhhhhhhccCCccc----cCCCCCC-CCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH
Q 003909 554 EALRCLALALKQMPINR----QTLSYDD-EKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK 628 (787)
Q Consensus 554 ~g~~~l~~a~~~~~~~~----~~~~~~~-e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~ 628 (787)
+|+|++|+|+|+++... +....+. |+|++|+|++.|+++++++++.+|++|+++.|+.+|+|||+..||..+|++
T Consensus 662 ~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVake 741 (1140)
T KOG0208|consen 662 QGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKE 741 (1140)
T ss_pred CCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhc
Confidence 99999999999998651 1122222 899999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCcccc---------------------c------------------------------cccccchhhccCC---hH
Q 003909 629 IGAFDHLVDF---------------------V------------------------------GRSYTASEFEELP---AM 654 (787)
Q Consensus 629 ~gi~~~~~~~---------------------~------------------------------~~~~~~~~~~~~~---~~ 654 (787)
||+..+.... + ...++|+.+.-+. .+
T Consensus 742 Cgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~ 821 (1140)
T KOG0208|consen 742 CGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPE 821 (1140)
T ss_pred ccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHH
Confidence 9998654210 0 0112222222221 22
Q ss_pred HHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHH
Q 003909 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734 (787)
Q Consensus 655 ~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~ 734 (787)
.+...+.+..|||||+|.||.++++.+|+.|..|+|+|||+||+.|||+||+||+++.+ +|.-+|.++....+...|.
T Consensus 822 l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp 899 (1140)
T KOG0208|consen 822 LVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVP 899 (1140)
T ss_pred HHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHh
Confidence 33445557789999999999999999999999999999999999999999999999743 5566899999988999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 735 AAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 735 ~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
++|++||+.+..-...++|+..|.+..++..+ .++..-.-++-.|.|+++|
T Consensus 900 ~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDL 950 (1140)
T KOG0208|consen 900 DVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDL 950 (1140)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHH
Confidence 99999999999999999999999965554433 2333345677778877764
No 18
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=9.6e-85 Score=772.15 Aligned_cols=714 Identities=21% Similarity=0.220 Sum_probs=526.0
Q ss_pred hcCCCCCCCCcCcc---HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 003909 35 IYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNA 111 (787)
Q Consensus 35 ~~g~N~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~ 111 (787)
.|..|.+.+.|++- +++++++||+++.++++++++++.++..+.. ......+++.++++++..+..+++.+.++++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~-~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~ 164 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV-FGRGASILPLAFVLLVTAVKDAYEDWRRHRS 164 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47889998888753 5788999999999999999999987665432 1122334444444444445555555555555
Q ss_pred HHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecC--CceEEecccccCCccccccccc
Q 003909 112 EKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (787)
Q Consensus 112 ~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~--g~~~vdes~ltGEs~pv~k~~~ 189 (787)
++.. ++..++|+|+|.+++++|++|+|||+|+|++||++|||++++++++ |.|+|||++||||+.|+.|.++
T Consensus 165 d~~~------N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 165 DRIE------NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHhh------cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 4432 4567899999999999999999999999999999999999997543 8899999999999999999765
Q ss_pred cccc--------------------------------cccCCCCCCceEeeccEEec-ceEEEEEEEecchhhhhHHHHHh
Q 003909 190 SIIA--------------------------------TNAVYQDKTNILFSGTVVVA-GRARAVVVGVGANTAMGSIRDSM 236 (787)
Q Consensus 190 ~~~~--------------------------------~~~~~~~~~~~l~~Gt~v~~-g~~~~~V~~tg~~T~~~~i~~~~ 236 (787)
+... ......+.+|++++|+.+.+ .+++|+|++||++|.+ +.+.
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~---~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKA---MLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhH---hhcC
Confidence 3211 01123456789999999986 5899999999999963 3333
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCCcch-------------------hhHHHHHH
Q 003909 237 LQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFR----DPSHGGFL-------------------RGAIHYFK 293 (787)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------------------~~~~~~~~ 293 (787)
..+..+.+++++.++++..++..+.+++|+++.++...+.. ..++..|. ...+..|.
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 395 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFL 395 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence 34456789999999999988888888887777655432211 00000000 01123344
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHhhhcc----------ccccccccccccCCeeEEEeCCCCccccCceEEEEEE
Q 003909 294 IAVALAVAAIPEGLPAVVTTCLALGTKRMARLN----------AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKIC 363 (787)
Q Consensus 294 ~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~----------i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~ 363 (787)
.++.++..++|.+|++.++++...+..++.++. +.+|+.+..|+||+|++||+|||||||+|.|.++++.
T Consensus 396 ~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~ 475 (1178)
T PLN03190 396 MSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCAS 475 (1178)
T ss_pred HHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEE
Confidence 456677789999999999999988888886644 6799999999999999999999999999999999999
Q ss_pred EecccccCcceeE------E--eecCccccCCCccccCCC-----ccccCCCChhHHHHHHHHhhhcccccccccCC--C
Q 003909 364 VVHSVQQGPIIAE------Y--GVTGTTYAPEGVVFDSSG-----IQLEFPAQLPCLLHIARCSALCNESVLQYNPD--K 428 (787)
Q Consensus 364 ~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~ 428 (787)
+.+..+....... . ...+..+.+......+.. ...........+..+..++++||++.+....+ .
T Consensus 476 i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~ 555 (1178)
T PLN03190 476 IWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSD 555 (1178)
T ss_pred ECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCC
Confidence 8765443211000 0 011111111110000000 00000011234667889999999986532111 1
Q ss_pred ----CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeC-
Q 003909 429 ----GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK- 503 (787)
Q Consensus 429 ----~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~- 503 (787)
...+..++|+|.||+.+|++.|+.+..+++.++..... .....|+++..+||+|+||||||+++.+
T Consensus 556 ~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~---------~~~~~~~il~~~pF~S~rKrMSvIv~~~~ 626 (1178)
T PLN03190 556 PTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIH---------GERQRFNVLGLHEFDSDRKRMSVILGCPD 626 (1178)
T ss_pred ccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeec---------cceecceeEEEecccccccEEEEEEEcCC
Confidence 12356679999999999999999887776655433211 2345789999999999999999999874
Q ss_pred CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccC-----------
Q 003909 504 QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT----------- 572 (787)
Q Consensus 504 ~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~----------- 572 (787)
++..+|+||+||.|+++|+... ++..++.+.+.+++|+. +|+||+++|||.++.++..
T Consensus 627 ~~~~l~~KGA~e~il~~~~~~~----------~~~~~~~~~~~l~~~a~-~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~ 695 (1178)
T PLN03190 627 KTVKVFVKGADTSMFSVIDRSL----------NMNVIRATEAHLHTYSS-LGLRTLVVGMRELNDSEFEQWHFSFEAAST 695 (1178)
T ss_pred CcEEEEEecCcHHHHHhhcccc----------cchhHHHHHHHHHHHHh-cCCceEEEEEEeCCHHHHhhHHHHHHHhhh
Confidence 5688999999999999996532 12345667888999998 9999999999998743211
Q ss_pred -----------CCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc---
Q 003909 573 -----------LSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF--- 638 (787)
Q Consensus 573 -----------~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~--- 638 (787)
...+.|+|++++|+++++|++|++++++|++|+++|++++|+|||+.++|..+|+++|+.......
T Consensus 696 ~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i 775 (1178)
T PLN03190 696 ALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIII 775 (1178)
T ss_pred hhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEe
Confidence 001237999999999999999999999999999999999999999999999999999997543110
Q ss_pred ------------------------------------------ccccccchhhccCCh----HHHHHhhc--cceEEEecC
Q 003909 639 ------------------------------------------VGRSYTASEFEELPA----MQQTVALQ--HMALFTRVE 670 (787)
Q Consensus 639 ------------------------------------------~~~~~~~~~~~~~~~----~~~~~~~~--~~~v~~~~~ 670 (787)
...+++|..+..+.+ +.+..... ...||||++
T Consensus 776 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~s 855 (1178)
T PLN03190 776 NSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVA 855 (1178)
T ss_pred cCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCC
Confidence 012344544444432 12223332 345899999
Q ss_pred hhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHH-HHHHHHHHHH
Q 003909 671 PSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAV-AEGRAIYNNT 747 (787)
Q Consensus 671 p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i 747 (787)
|.||+++|+.+|+. ++.|+|+|||.||++||++|||||++. ....+|+.+||+.+.. +..+.+++ -|||+.|.|+
T Consensus 856 P~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~ 933 (1178)
T PLN03190 856 PLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRM 933 (1178)
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHH
Confidence 99999999999987 578999999999999999999999863 5555899999999987 55566665 5999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHh
Q 003909 748 KQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780 (787)
Q Consensus 748 ~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~ 780 (787)
.+.+.|.++.|++..+++|++.++..+++.+..
T Consensus 934 s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly 966 (1178)
T PLN03190 934 GYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAI 966 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 999999999999999999998888877665433
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6e-84 Score=720.46 Aligned_cols=559 Identities=24% Similarity=0.304 Sum_probs=456.4
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHhhcCC-----CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eeEE
Q 003909 55 KQFDDLLVKILIAAAVISFFLALINGE-----TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQAD-IATV 128 (787)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~v 128 (787)
.||+++..++++++++++++++++... .....|...+.+++.++++.+++.++++|+++.++.|++..++ .++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 567899999999999999988765311 1123444556666667778888889999999999999998876 6999
Q ss_pred EeCCe-EEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEee
Q 003909 129 LRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFS 207 (787)
Q Consensus 129 ~r~g~-~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~ 207 (787)
+|+|+ +++|++++|++||+|.+++||+|||||++++ |.+.||||++||||.|+.|.+++. .+.+|+
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~~----------~~~V~a 175 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGGD----------FSSVTG 175 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCCc----------cCeEEe
Confidence 99988 9999999999999999999999999999996 568999999999999999987532 233999
Q ss_pred ccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhh
Q 003909 208 GTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRG 287 (787)
Q Consensus 208 Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (787)
||.+.+|++.++|+++|.+|.++++.+++..++++++|++...+.+...+..++++++++.+.+.. +.. . .
T Consensus 176 GT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~--~~g---~----~ 246 (679)
T PRK01122 176 GTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA--YSG---G----A 246 (679)
T ss_pred ceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--HhC---c----h
Confidence 999999999999999999999999999999998999999988877766655444443333332221 110 0 1
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecc
Q 003909 288 AIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHS 367 (787)
Q Consensus 288 ~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 367 (787)
..+.+++++++++|||+++.+.+.+...++.+++|+|+++|+.+++|.+|++|++|||||||||+|+|.+.+++..+.
T Consensus 247 --~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~ 324 (679)
T PRK01122 247 --LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG 324 (679)
T ss_pred --HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC
Confidence 256778999999999999999999999999999999999999999999999999999999999999999998764321
Q ss_pred cccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHH
Q 003909 368 VQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAE 447 (787)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 447 (787)
. .. ..+.....+|+... .||..+|++++++
T Consensus 325 ~----------------------------------~~---~~ll~~a~~~s~~s-------------~hP~~~AIv~~a~ 354 (679)
T PRK01122 325 V----------------------------------TE---EELADAAQLSSLAD-------------ETPEGRSIVVLAK 354 (679)
T ss_pred C----------------------------------CH---HHHHHHHHHhcCCC-------------CCchHHHHHHHHH
Confidence 0 01 12333444454321 3688899999987
Q ss_pred H-cCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccc
Q 003909 448 K-VGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILC 526 (787)
Q Consensus 448 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~ 526 (787)
+ .+.... ...+.....+||++.++++++.++ + ..|.||++|.+++.|..
T Consensus 355 ~~~~~~~~-----------------------~~~~~~~~~~pF~s~~~~~gv~~~--g--~~~~kGa~e~il~~~~~--- 404 (679)
T PRK01122 355 QRFNLRER-----------------------DLQSLHATFVPFSAQTRMSGVDLD--G--REIRKGAVDAIRRYVES--- 404 (679)
T ss_pred hhcCCCch-----------------------hhccccceeEeecCcCceEEEEEC--C--EEEEECCHHHHHHHHHh---
Confidence 6 232110 011344567899999998887553 3 57899999999999954
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHh
Q 003909 527 NDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMT 606 (787)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~ 606 (787)
+|... .+.+.+..++++. +|.|++++|+ |++++|+++++|++||++++++++||+
T Consensus 405 --~g~~~------~~~~~~~~~~~a~-~G~~~l~va~----------------~~~~lG~i~l~D~~R~~~~eai~~Lr~ 459 (679)
T PRK01122 405 --NGGHF------PAELDAAVDEVAR-KGGTPLVVAE----------------DNRVLGVIYLKDIVKPGIKERFAELRK 459 (679)
T ss_pred --cCCcC------hHHHHHHHHHHHh-CCCcEEEEEE----------------CCeEEEEEEEeccCchhHHHHHHHHHH
Confidence 12211 1345566677777 9999999983 678999999999999999999999999
Q ss_pred CCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCC
Q 003909 607 AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNE 686 (787)
Q Consensus 607 ~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~ 686 (787)
+||+++|+|||++.+|.++|+++|++. +|+|++|++|.++|+.+|+.|+
T Consensus 460 ~GI~vvMiTGDn~~TA~aIA~elGId~-------------------------------v~A~~~PedK~~iV~~lQ~~G~ 508 (679)
T PRK01122 460 MGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FLAEATPEDKLALIRQEQAEGR 508 (679)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCcE-------------------------------EEccCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999976 8999999999999999999999
Q ss_pred EEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 687 VVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (787)
Q Consensus 687 ~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~ 766 (787)
.|+|+|||.||+|+|++|||||||++|++.+|++||+|+.++|+..+.+++++||+++-.--....|++...+.-.+.++
T Consensus 509 ~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~ 588 (679)
T PRK01122 509 LVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAII 588 (679)
T ss_pred eEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999996666667899875555555554
Q ss_pred HHHHhcC
Q 003909 767 VAAVLGI 773 (787)
Q Consensus 767 ~~~~~~~ 773 (787)
-+.|...
T Consensus 589 p~~~~~~ 595 (679)
T PRK01122 589 PAMFAAT 595 (679)
T ss_pred HHHHHhh
Confidence 4444433
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.1e-80 Score=692.17 Aligned_cols=567 Identities=24% Similarity=0.350 Sum_probs=459.5
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHhhcC---CCCc-ccchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-e
Q 003909 55 KQFDDLLVKILIAAAVISFFLALING---ETGL-TAFLEP---SVILLILAANAAVGVITETNAEKALEELRAYQADI-A 126 (787)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~---~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~ 126 (787)
.||+++..+++++++++++++++++. ..+. ..|++. +.+++.++++.+++.++++|+++.++.|++..++. +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 56789999999999999998876531 1011 134553 33445567788888899999999999999988764 7
Q ss_pred EEEe-CCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceE
Q 003909 127 TVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNIL 205 (787)
Q Consensus 127 ~v~r-~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l 205 (787)
+|+| ||++++|++++|+|||+|.+++||+|||||++++ |.+.||||++||||.|+.|.+++. .+.+
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~----------~~~V 174 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD----------FASV 174 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC----------ccee
Confidence 8885 8999999999999999999999999999999996 678999999999999999998632 1139
Q ss_pred eeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcch
Q 003909 206 FSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFL 285 (787)
Q Consensus 206 ~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (787)
|+||.+.+|++.++|+++|.+|.++++.+++..++++++|++..++.+..++..++++++++.+.+. .+.
T Consensus 175 ~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~--~~~-------- 244 (675)
T TIGR01497 175 TGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFA--AYG-------- 244 (675)
T ss_pred ecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhc--------
Confidence 9999999999999999999999999999999999888999998877776555444333332222211 110
Q ss_pred hhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEe
Q 003909 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (787)
Q Consensus 286 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~ 365 (787)
.....+..++++++++|||+++...+.+...++.+++++|+++|+.+++|.+|++|++|||||||||+|+|.+.+++..
T Consensus 245 -~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~ 323 (675)
T TIGR01497 245 -GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA 323 (675)
T ss_pred -ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec
Confidence 0112456678899999999998888888888999999999999999999999999999999999999999999988653
Q ss_pred cccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHH
Q 003909 366 HSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVL 445 (787)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 445 (787)
+.. .. .++.....+|+.. ..||.++|++.+
T Consensus 324 ~~~----------------------------------~~---~~ll~~aa~~~~~-------------s~hP~a~Aiv~~ 353 (675)
T TIGR01497 324 QGV----------------------------------DE---KTLADAAQLASLA-------------DDTPEGKSIVIL 353 (675)
T ss_pred CCC----------------------------------cH---HHHHHHHHHhcCC-------------CCCcHHHHHHHH
Confidence 210 01 1233334444422 147899999999
Q ss_pred HHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhccccc
Q 003909 446 AEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNIL 525 (787)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~ 525 (787)
+++.|..... ..+......||+++++++++.+. ++ ..+.||++|.+++.|+.
T Consensus 354 a~~~~~~~~~-----------------------~~~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~-- 405 (675)
T TIGR01497 354 AKQLGIREDD-----------------------VQSLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEA-- 405 (675)
T ss_pred HHHcCCCccc-----------------------cccccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHh--
Confidence 9876643210 11223467899999888776543 23 57899999999998853
Q ss_pred ccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHH
Q 003909 526 CNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCM 605 (787)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~ 605 (787)
+|...+ ..+.+.+++++. +|.|++++|+ +.+++|+++++|++||+++++|++|+
T Consensus 406 ---~g~~~~------~~~~~~~~~~a~-~G~r~l~va~----------------~~~~lG~i~l~D~~Rp~a~eaI~~l~ 459 (675)
T TIGR01497 406 ---NGGHIP------TDLDQAVDQVAR-QGGTPLVVCE----------------DNRIYGVIYLKDIVKGGIKERFAQLR 459 (675)
T ss_pred ---cCCCCc------HHHHHHHHHHHh-CCCeEEEEEE----------------CCEEEEEEEecccchhHHHHHHHHHH
Confidence 122111 235566677777 9999999984 46899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCC
Q 003909 606 TAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQN 685 (787)
Q Consensus 606 ~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 685 (787)
++|++++|+|||+..+|.++|+++|++. ++++++|++|.++++.+|+.|
T Consensus 460 ~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------------------v~a~~~PedK~~~v~~lq~~g 508 (675)
T TIGR01497 460 KMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------------------FIAEATPEDKIALIRQEQAEG 508 (675)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------EEcCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999976 889999999999999999999
Q ss_pred CEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 686 EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (787)
Q Consensus 686 ~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~ 765 (787)
+.|+|+|||.||+|||++||+||||+++++.++++||+++.++|+..+.+++++||+++-+......|+++.++.-.+.+
T Consensus 509 ~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~ 588 (675)
T TIGR01497 509 KLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAI 588 (675)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988887777
Q ss_pred HHHHHhcCCCchhHh
Q 003909 766 FVAAVLGIPDTLAPV 780 (787)
Q Consensus 766 ~~~~~~~~~~~l~~~ 780 (787)
+-+.|....+.+...
T Consensus 589 ~~~~~~~~~~~~~~~ 603 (675)
T TIGR01497 589 IPAIFAAAYPQLQAL 603 (675)
T ss_pred HHHHHHhhCcchhhh
Confidence 666666544444433
No 21
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-80 Score=687.07 Aligned_cols=503 Identities=28% Similarity=0.394 Sum_probs=428.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEe-CCeEEEeecCCCCCCcEEEecCCCccccceeee
Q 003909 85 TAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMI 163 (787)
Q Consensus 85 ~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r-~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il 163 (787)
.+|.++..+++++.++.+++.+...|++++++.|.++.|+++++++ ||++++|+.++|++||+|.|+|||+||+||+|+
T Consensus 172 ~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 172 VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 4556788888999999999999999999999999999999998777 455999999999999999999999999999999
Q ss_pred eecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCC
Q 003909 164 EMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEV 243 (787)
Q Consensus 164 ~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~ 243 (787)
+ |...||||++||||.|+.|.+ ++.|++||.+.+|....+|+++|.+|.++++.+++.+++.++
T Consensus 252 ~---G~s~vDeS~iTGEs~PV~k~~-------------Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~K 315 (713)
T COG2217 252 S---GSSSVDESMLTGESLPVEKKP-------------GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSK 315 (713)
T ss_pred e---CcEEeecchhhCCCCCEecCC-------------CCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCC
Confidence 6 777899999999999999998 456999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhh
Q 003909 244 TPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMA 323 (787)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~ 323 (787)
+|.++..|+++.+++|++++++++.|++|++.... .+...+..++++|+++|||+|.+++|+++..++.+.+
T Consensus 316 a~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA 387 (713)
T COG2217 316 APIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAA 387 (713)
T ss_pred chHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877655421 2334678899999999999999999999999999999
Q ss_pred hccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCC
Q 003909 324 RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQ 403 (787)
Q Consensus 324 ~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (787)
++|+++|+...+|.++++|+++||||||||+|+|.|..+...+. .
T Consensus 388 ~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~---------------------------------- 432 (713)
T COG2217 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-D---------------------------------- 432 (713)
T ss_pred hCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-C----------------------------------
Confidence 99999999999999999999999999999999999999876532 1
Q ss_pred hhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccE
Q 003909 404 LPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKK 483 (787)
Q Consensus 404 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (787)
...++.++.++. ..+.||..+|++++++..|..... .
T Consensus 433 e~~~L~laAalE----------------~~S~HPiA~AIv~~a~~~~~~~~~---------------------------~ 469 (713)
T COG2217 433 EDELLALAAALE----------------QHSEHPLAKAIVKAAAERGLPDVE---------------------------D 469 (713)
T ss_pred HHHHHHHHHHHH----------------hcCCChHHHHHHHHHHhcCCCCcc---------------------------c
Confidence 123334443322 223599999999998877632210 0
Q ss_pred eEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhh
Q 003909 484 VSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALAL 563 (787)
Q Consensus 484 l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~ 563 (787)
...+| .+.... .-++ ..+..|++..+.+.-.. .+. ..+..+.+.. +|..++.++
T Consensus 470 ~~~i~---G~Gv~~---~v~g--~~v~vG~~~~~~~~~~~---------~~~-------~~~~~~~~~~-~G~t~v~va- 523 (713)
T COG2217 470 FEEIP---GRGVEA---EVDG--ERVLVGNARLLGEEGID---------LPL-------LSERIEALES-EGKTVVFVA- 523 (713)
T ss_pred eeeec---cCcEEE---EECC--EEEEEcCHHHHhhcCCC---------ccc-------hhhhHHHHHh-cCCeEEEEE-
Confidence 11111 111111 1122 45677998877653211 110 1222333443 676666665
Q ss_pred ccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc
Q 003909 564 KQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643 (787)
Q Consensus 564 ~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~ 643 (787)
.|.+++|+++++|++||+++++|++||+.|++++|+|||+..+|+.+|+++||+.
T Consensus 524 ---------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------- 578 (713)
T COG2217 524 ---------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------- 578 (713)
T ss_pred ---------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh----------
Confidence 4679999999999999999999999999999999999999999999999999977
Q ss_pred cchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe
Q 003909 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723 (787)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~ 723 (787)
+++++.|++|.+.|+.+|+.|+.|+|||||.||.|+|.+||||||||.|+|.++++||+
T Consensus 579 ---------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADv 637 (713)
T COG2217 579 ---------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADV 637 (713)
T ss_pred ---------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCE
Confidence 78899999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGE 761 (787)
Q Consensus 724 v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~ 761 (787)
+++++|+..++++++.+|++++++|||+.|++.||...
T Consensus 638 vL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ 675 (713)
T COG2217 638 VLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIA 675 (713)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999543
No 22
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-77 Score=620.65 Aligned_cols=659 Identities=30% Similarity=0.422 Sum_probs=516.7
Q ss_pred ccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 003909 5 YARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGL 84 (787)
Q Consensus 5 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (787)
-+.+++|+.+.|.+. +.||+++|+++|++.||+|++.+++.+.+.|++ --|++|.-+..-.++++.+.+ ..+....
T Consensus 19 ~~~p~eeVfeeL~~t-~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~L--ang~~~~ 94 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCT-REGLTSDEVEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGL--ANGGGRP 94 (942)
T ss_pred ccCchhhhHHHHhcC-CCCCchHHHHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHH--hcCCCCC
Confidence 467899999999886 459999999999999999999988777666654 447788887777777776544 3333345
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 85 TAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 85 ~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
..|.+...|..++++|..+++++|+++-.....|+.....+.+|+|||+|.+++++.||||||+.++.|+++|||+++++
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~ 174 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLE 174 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceec
Confidence 67888888888899999999999999999999998888889999999999999999999999999999999999999998
Q ss_pred ecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCC
Q 003909 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (787)
Q Consensus 165 ~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~ 244 (787)
++.+.||+|.|||||.|+.|.++ +.+|+||.+.+|++.++|++||.+|..|+...++.. .+..-
T Consensus 175 --gD~LkiDQSAlTGESLpvtKh~g-------------d~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~G 238 (942)
T KOG0205|consen 175 --GDPLKIDQSALTGESLPVTKHPG-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVG 238 (942)
T ss_pred --CCccccchhhhcCCccccccCCC-------------CceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcc
Confidence 45899999999999999999984 458999999999999999999999999999888877 55667
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHH-HhcCCchHHHHHHHHHHHHHHhh
Q 003909 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV-AAIPEGLPAVVTTCLALGTKRMA 323 (787)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~-~~~P~~l~~~~~~~~~~~~~~l~ 323 (787)
.+++-++.+.++.+..+++-.++.+++.+... ..........+.+++ ..+|.++|..+++.+++++.+|+
T Consensus 239 HFqkVLt~IGn~ci~si~~g~lie~~vmy~~q---------~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLa 309 (942)
T KOG0205|consen 239 HFQKVLTGIGNFCICSIALGMLIEITVMYPIQ---------HRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (942)
T ss_pred cHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhh---------hhhhhhhhhheheeeecccccccceeeeehhhHHHHHHH
Confidence 78888888877765543332222222221111 011122233344444 45999999999999999999999
Q ss_pred hccccccccccccccCCeeEEEeCCCCccccCceEEEE--EEEecccccCcceeEEeecCccccCCCccccCCCccccCC
Q 003909 324 RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAK--ICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFP 401 (787)
Q Consensus 324 ~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (787)
++|.+.|..+++|.|+-+|++|+|||||||.|+++|.+ +...- .+
T Consensus 310 qqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v-------------~g-------------------- 356 (942)
T KOG0205|consen 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFV-------------KG-------------------- 356 (942)
T ss_pred hcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeee-------------cC--------------------
Confidence 99999999999999999999999999999999999977 31110 00
Q ss_pred CChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccc
Q 003909 402 AQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEF 481 (787)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (787)
-++.-.-+..|.+. ... -.|.+|.|++..... ++ .....|
T Consensus 357 -v~~D~~~L~A~rAs----r~e----------n~DAID~A~v~~L~d----------------PK---------eara~i 396 (942)
T KOG0205|consen 357 -VDKDDVLLTAARAS----RKE----------NQDAIDAAIVGMLAD----------------PK---------EARAGI 396 (942)
T ss_pred -CChHHHHHHHHHHh----hhc----------ChhhHHHHHHHhhcC----------------HH---------HHhhCc
Confidence 01111112222111 110 125677777654321 01 123467
Q ss_pred cEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhh
Q 003909 482 KKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLA 560 (787)
Q Consensus 482 ~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 560 (787)
+.+..+||++..|+.+..+.+ +|+-+..+||+|+.|++.|+. +.+.++.+.+.+++|++ .|+|.++
T Consensus 397 kevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~------------~~~i~~~vh~~id~~Ae-RGlRSLg 463 (942)
T KOG0205|consen 397 KEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE------------DHDIPERVHSIIDKFAE-RGLRSLA 463 (942)
T ss_pred eEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc------------cCcchHHHHHHHHHHHH-hcchhhh
Confidence 888999999999998887765 577788899999999999964 23456778888899998 9999999
Q ss_pred hhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 003909 561 LALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (787)
Q Consensus 561 ~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~ 640 (787)
+|++..+...+... .....|+|++-+-||+|.++.++|++....|++|.|+|||...-++..++++|+-..... +
T Consensus 464 VArq~v~e~~~~~~---g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp--s 538 (942)
T KOG0205|consen 464 VARQEVPEKTKESP---GGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--S 538 (942)
T ss_pred hhhhccccccccCC---CCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC--c
Confidence 99998876543322 356789999999999999999999999999999999999999999999999998654322 1
Q ss_pred ccccchh-hccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh
Q 003909 641 RSYTASE-FEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (787)
Q Consensus 641 ~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~ 719 (787)
..+.|.. -+++......+.+....-|+...|+||.++|+.||.+++.++|.|||.||.|+|+.||+|||+.++++.++.
T Consensus 539 s~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~ 618 (942)
T KOG0205|consen 539 SALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (942)
T ss_pred hhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcc
Confidence 1111111 122333344455566667999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhhe
Q 003909 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLIS 784 (787)
Q Consensus 720 ~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~ 784 (787)
++|+|+....++-+..++..+|.++.|++.+..|+++..+-..+.+ ....+-+.+.|+|..+++
T Consensus 619 asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gf-ml~alIw~~df~pfmvli 682 (942)
T KOG0205|consen 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF-MLIALIWEFDFSPFMVLI 682 (942)
T ss_pred cccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHH-HHHHHHHHhcCCHHHHHH
Confidence 9999999999999999999999999999999999888776655332 222222333455554443
No 23
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-76 Score=642.73 Aligned_cols=534 Identities=22% Similarity=0.300 Sum_probs=440.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCe-EEEeecCCCCCCcEEEecCCCcccccee
Q 003909 83 GLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMR 161 (787)
Q Consensus 83 ~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~-~~~i~~~~Lv~GDII~l~~G~~vPaD~~ 161 (787)
...+|-++..++.++.+..+++.....++...+..|..+.+.++.++.+|+ +++|+.+.+++||+|+|.||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 344555566677778888999998888999999999999999999999996 9999999999999999999999999999
Q ss_pred eeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCC
Q 003909 162 MIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTED 241 (787)
Q Consensus 162 il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~ 241 (787)
+++ |+++||||.+|||++|+.|++ ++.|.+||++.+|...+.++++|.+|.+++|.+++.+++.
T Consensus 417 Vv~---Gss~VDEs~iTGEs~PV~Kk~-------------gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~ 480 (951)
T KOG0207|consen 417 VVD---GSSEVDESLITGESMPVPKKK-------------GSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQL 480 (951)
T ss_pred EEe---CceeechhhccCCceecccCC-------------CCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHc
Confidence 996 888999999999999999998 4569999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 003909 242 EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD--PSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (787)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~ 319 (787)
.++|+|+.+|+++.+++|+++++++..+++|++.... .....|...+...|.+++++++++|||+|.++.|++...+.
T Consensus 481 sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 481 SKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred ccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 9999999999999999999999999999999766542 22233456777889999999999999999999999999999
Q ss_pred HHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCcccc
Q 003909 320 KRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLE 399 (787)
Q Consensus 320 ~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (787)
...+++|+++|..+.||.+.++++|+||||||||+|+|.|.++....+.-
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~------------------------------ 610 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI------------------------------ 610 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc------------------------------
Confidence 99999999999999999999999999999999999999999987653210
Q ss_pred CCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccc
Q 003909 400 FPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479 (787)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (787)
....++.+... .+....||...|+..|++.........
T Consensus 611 ---~~~e~l~~v~a----------------~Es~SeHPig~AIv~yak~~~~~~~~~----------------------- 648 (951)
T KOG0207|consen 611 ---SLKEALALVAA----------------MESGSEHPIGKAIVDYAKEKLVEPNPE----------------------- 648 (951)
T ss_pred ---cHHHHHHHHHH----------------HhcCCcCchHHHHHHHHHhcccccCcc-----------------------
Confidence 11222222221 112335999999999998765221100
Q ss_pred cccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhh
Q 003909 480 EFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCL 559 (787)
Q Consensus 480 ~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l 559 (787)
..+..-.|.-+... +-+..+++. .+-|+-+.+.+.- ... .+ .+++.++.... .|..+.
T Consensus 649 --~~~~~~~~pg~g~~--~~~~~~~~~--i~iGN~~~~~r~~---------~~~--~~----~i~~~~~~~e~-~g~tvv 706 (951)
T KOG0207|consen 649 --GVLSFEYFPGEGIY--VTVTVDGNE--VLIGNKEWMSRNG---------CSI--PD----DILDALTESER-KGQTVV 706 (951)
T ss_pred --ccceeecccCCCcc--cceEEeeeE--EeechHHHHHhcC---------CCC--ch----hHHHhhhhHhh-cCceEE
Confidence 00011111111111 112222222 5678888776632 211 11 13344444333 777777
Q ss_pred hhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccc
Q 003909 560 ALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639 (787)
Q Consensus 560 ~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~ 639 (787)
.++ .|.+++|++.++|++||++..+|+.||+.|++++|+|||+..+|+++|+++|++.
T Consensus 707 ~v~----------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~------ 764 (951)
T KOG0207|consen 707 YVA----------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN------ 764 (951)
T ss_pred EEE----------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce------
Confidence 776 4889999999999999999999999999999999999999999999999999776
Q ss_pred cccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh
Q 003909 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (787)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~ 719 (787)
||++..|+||.+.++.+|++++.|+|||||.||.|+|.+|||||+|+.+++.+.+
T Consensus 765 -------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAie 819 (951)
T KOG0207|consen 765 -------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIE 819 (951)
T ss_pred -------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 003909 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP 774 (787)
Q Consensus 720 ~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~ 774 (787)
+||+|++.||+.+++.+++.+|++.+|+|.|+.|++.||+..+ ++.+..|+.++
T Consensus 820 aADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I-pIAagvF~P~~ 873 (951)
T KOG0207|consen 820 AADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI-PIAAGVFAPFG 873 (951)
T ss_pred hCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hhheecccCCc
Confidence 9999999999999999999999999999999999999995322 34444444444
No 24
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.8e-74 Score=665.76 Aligned_cols=498 Identities=25% Similarity=0.346 Sum_probs=423.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~ 165 (787)
.|.++..++++++++.+++.+.+.|+++.+++|.++.+.+++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~- 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS- 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-
Confidence 4677888888999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCc
Q 003909 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (787)
Q Consensus 166 ~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~ 245 (787)
|.+.||||+|||||.|+.|.+ ++.||+||.+.+|.+.++|+++|.+|.++++.+.+.+++.+++|
T Consensus 284 --g~~~vdes~lTGEs~Pv~k~~-------------Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~ 348 (741)
T PRK11033 284 --PFASFDESALTGESIPVERAT-------------GEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAP 348 (741)
T ss_pred --CcEEeecccccCCCCCEecCC-------------CCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCCh
Confidence 668999999999999999987 45699999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhc
Q 003909 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (787)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~ 325 (787)
+++.+++++.++++++++++++.+++|...+.. .+...+..++++++++|||+|.++.|+++..+..+++|+
T Consensus 349 ~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~ 420 (741)
T PRK11033 349 IERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARR 420 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHC
Confidence 999999999999999999999998887443321 123456678999999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChh
Q 003909 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (787)
Q Consensus 326 ~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (787)
|+++|+.+++|.|+++|++|||||||||+|+|+|.++...+.. ...
T Consensus 421 gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------------------------~~~ 466 (741)
T PRK11033 421 GALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI----------------------------------SES 466 (741)
T ss_pred CeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------------------------CHH
Confidence 9999999999999999999999999999999999998654211 111
Q ss_pred HHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeE
Q 003909 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (787)
Q Consensus 406 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (787)
.+..++. ++. ....||.++|+++++++.+..
T Consensus 467 ~~l~~aa--~~e--------------~~s~hPia~Ai~~~a~~~~~~--------------------------------- 497 (741)
T PRK11033 467 ELLALAA--AVE--------------QGSTHPLAQAIVREAQVRGLA--------------------------------- 497 (741)
T ss_pred HHHHHHH--HHh--------------cCCCCHHHHHHHHHHHhcCCC---------------------------------
Confidence 2222221 111 123599999999998876543
Q ss_pred eecCCCCCceEE---EEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhh
Q 003909 486 ILEFSRDRKMMS---VLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALA 562 (787)
Q Consensus 486 ~~~f~~~~~~~s---viv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a 562 (787)
+||.++++.+. +....+++. +..|+++.+.+ +++ .+.+.+.++.. +|.+++.++
T Consensus 498 -~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~---------------~~~----~~~~~~~~~~~-~g~~~v~va 554 (741)
T PRK11033 498 -IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP---------------LAD----AFAGQINELES-AGKTVVLVL 554 (741)
T ss_pred -CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh---------------ccH----HHHHHHHHHHh-CCCEEEEEE
Confidence 12333333332 111123332 34578876543 111 12333455665 899999888
Q ss_pred hccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccc
Q 003909 563 LKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642 (787)
Q Consensus 563 ~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~ 642 (787)
+ |.+++|+++|+|++||+++++|++|+++|++++|+|||+..++..+|+++||.
T Consensus 555 ~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---------- 608 (741)
T PRK11033 555 R----------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---------- 608 (741)
T ss_pred E----------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------
Confidence 4 66899999999999999999999999999999999999999999999999995
Q ss_pred ccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC
Q 003909 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (787)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad 722 (787)
.+++..|++|.++++.+++. +.|+|+|||.||++||+.||+||||+++++.++++||
T Consensus 609 ----------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~ad 665 (741)
T PRK11033 609 ----------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETAD 665 (741)
T ss_pred ----------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCC
Confidence 34568899999999999865 5899999999999999999999999999999999999
Q ss_pred eeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 723 MVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 723 ~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
+++.++++.++.++++.||++++++++|+.|++.||+..+
T Consensus 666 ivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i 705 (741)
T PRK11033 666 AALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFL 705 (741)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999996444
No 25
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-75 Score=603.09 Aligned_cols=699 Identities=21% Similarity=0.248 Sum_probs=516.0
Q ss_pred HHHhhcCCCCCCCCcCcc---HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 003909 31 RHVRIYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVIT 107 (787)
Q Consensus 31 ~~~~~~g~N~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~ 107 (787)
.+.++|.+|++...|++. ++..++.||+-..+.++++.++-.++..+..+. -..+|.+.+.++++.++...+..+.
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~-l~ty~~pl~fvl~itl~keavdd~~ 152 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY-LSTYWGPLGFVLTITLIKEAVDDLK 152 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc-hhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 456678899988877643 577888999988888887776666655433221 1234444455555556656665555
Q ss_pred HHHHHHHHHHHHhcCCCee-EEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeec--CCceEEecccccCCcccc
Q 003909 108 ETNAEKALEELRAYQADIA-TVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTGESCSV 184 (787)
Q Consensus 108 ~~~~~~~~~~l~~~~~~~~-~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~--~g~~~vdes~ltGEs~pv 184 (787)
+++..+.. +.+.. +.-|+|.... ++++|++||+|+++++++||||+++|..+ +|.|.+.+..|+||++.+
T Consensus 153 r~~rd~~~------Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 153 RRRRDREL------NSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHhhhhh------hhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 54433322 22223 3447776555 99999999999999999999999999644 689999999999999866
Q ss_pred ccccccccc----------------------------------cccCCCCCCceEeeccEEecceEEEEEEEecchhhhh
Q 003909 185 EKELDSIIA----------------------------------TNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMG 230 (787)
Q Consensus 185 ~k~~~~~~~----------------------------------~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~ 230 (787)
.|-+.+..+ ++....+-+|.+|++|++.+|.++|+|++||.+|..
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs- 304 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS- 304 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH-
Confidence 654332221 112355668999999999999999999999999932
Q ss_pred HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHH
Q 003909 231 SIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAV 310 (787)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~ 310 (787)
..+...++.+...++..++.+..++...++.++++......+ -..|...+.+++.++...+|.+|-+.
T Consensus 305 --vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----------~~~wyi~~~RfllLFS~IIPISLRvn 372 (1051)
T KOG0210|consen 305 --VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----------GSDWYIYIIRFLLLFSSIIPISLRVN 372 (1051)
T ss_pred --HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----------CCchHHHHHHHHHHHhhhceeEEEEe
Confidence 122223334444567777777777776666666655443221 12345667788889999999999999
Q ss_pred HHHHHHHHHHHhhhc----cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeec-Ccccc
Q 003909 311 VTTCLALGTKRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVT-GTTYA 385 (787)
Q Consensus 311 ~~~~~~~~~~~l~~~----~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~-~~~~~ 385 (787)
+.++...-.+.+.+. |.++|+.+..|+||+++++.+|||||||+|+|.+++++...--+........+.. ...+.
T Consensus 373 lDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~ 452 (1051)
T KOG0210|consen 373 LDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYT 452 (1051)
T ss_pred hhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhC
Confidence 999999988888764 6789999999999999999999999999999999999876432221110000000 00000
Q ss_pred C---CCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhh
Q 003909 386 P---EGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALN 462 (787)
Q Consensus 386 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~ 462 (787)
+ ++....... +. .....+..+..++++||+..+.++.++...+...+|+|.|++++.+..|+....++...+.
T Consensus 453 ~~~~~~~~~~~~~-k~---~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~it 528 (1051)
T KOG0210|consen 453 PGRNKGKGALSRV-KK---DMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAIT 528 (1051)
T ss_pred CCcccccccchhh-cC---cccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEE
Confidence 0 000000000 11 1344577888999999999888877777788999999999999999999998877655554
Q ss_pred hhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeC--CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHH
Q 003909 463 MLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540 (787)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~--~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~ 540 (787)
...+ ......|+++..|||+|+.|||.+||+++ ++...|.||++..|-..- +..
T Consensus 529 L~~~--------~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV----------------q~N 584 (1051)
T KOG0210|consen 529 LRVP--------LDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV----------------QYN 584 (1051)
T ss_pred EecC--------CCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc----------------ccc
Confidence 4333 12356899999999999999999999986 788999999988664321 234
Q ss_pred HHHHHHHHHhhccccchhhhhhhccCCccc----------cCCCCCC-------------CCCcEEEEEeccCCCCChhH
Q 003909 541 AELESRLNSLAGKEALRCLALALKQMPINR----------QTLSYDD-------------EKDLTFIGLVGMLDPPREEV 597 (787)
Q Consensus 541 ~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~----------~~~~~~~-------------e~~l~~lG~i~~~d~~~~~~ 597 (787)
+++++...+++. +|+|++++|.|.++.++ +.++..+ |.|+.++|+.+.||++++++
T Consensus 585 dWleEE~gNMAR-EGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dV 663 (1051)
T KOG0210|consen 585 DWLEEECGNMAR-EGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDV 663 (1051)
T ss_pred hhhhhhhhhhhh-hcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhh
Confidence 678888889997 99999999999988432 1122111 78999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc------------------------ccccccchhhccCC-
Q 003909 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF------------------------VGRSYTASEFEELP- 652 (787)
Q Consensus 598 ~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~------------------------~~~~~~~~~~~~~~- 652 (787)
+.+++.||++||++||+|||..++|..+|+..++....... ...+++|+.++-..
T Consensus 664 k~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~ 743 (1051)
T KOG0210|consen 664 KPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLK 743 (1051)
T ss_pred HhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHH
Confidence 99999999999999999999999999999999987643321 12334444332211
Q ss_pred --hHHHHHhh--ccceEEEecChhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEec-CCccHHHHhhcCeecc
Q 003909 653 --AMQQTVAL--QHMALFTRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIAM-GSGTAVAKSASDMVLA 726 (787)
Q Consensus 653 --~~~~~~~~--~~~~v~~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgia~-~~~~~~~~~~ad~v~~ 726 (787)
+.++.+.. ....++|||+|.||+++++.+|+. +..|+++|||.||+.|+++||+||.+ |+...++.-+||+.+.
T Consensus 744 yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt 823 (1051)
T KOG0210|consen 744 YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT 823 (1051)
T ss_pred HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHH
Confidence 22222222 256799999999999999999976 89999999999999999999999997 5888888899999997
Q ss_pred CCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhh
Q 003909 727 DDNFATIVAAV-AEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVS 781 (787)
Q Consensus 727 ~~~~~~i~~~i-~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~ 781 (787)
. +..+.+++ -|||..|+|.-+.-+|.+-..+++.++..+++....+.|.+-.|
T Consensus 824 q--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~Lyq 877 (1051)
T KOG0210|consen 824 Q--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQ 877 (1051)
T ss_pred H--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhh
Confidence 6 66776665 68999999999999999999998888888777776666655444
No 26
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=6.9e-72 Score=627.71 Aligned_cols=490 Identities=26% Similarity=0.390 Sum_probs=411.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC-CeEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~-g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
+|..+.+++++++++.+++.+.++|+++.+++|.+..+++++++|+ |.+++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455566677788888999999999999999999999999999985 677999999999999999999999999999996
Q ss_pred ecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCC
Q 003909 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (787)
Q Consensus 165 ~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~ 244 (787)
|.+.||||+|||||.|+.|.+ ++.||+||.+.+|.+.++|+++|.+|.++++.+.+.+++.+++
T Consensus 133 ---g~~~vdes~lTGEs~pv~k~~-------------gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~ 196 (562)
T TIGR01511 133 ---GESEVDESLVTGESLPVPKKV-------------GDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKA 196 (562)
T ss_pred ---CceEEehHhhcCCCCcEEcCC-------------CCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 678999999999999999987 4569999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhh
Q 003909 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (787)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~ 324 (787)
++++..++++.++++++++++++.+++|. ..+..++++++++|||+|++++|+++..+..++++
T Consensus 197 ~~~~~~d~~a~~~~~~v~~~a~~~~~~~~----------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~ 260 (562)
T TIGR01511 197 PIQRLADKVAGYFVPVVIAIALITFVIWL----------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAK 260 (562)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999998888877653 24677899999999999999999999999999999
Q ss_pred ccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCCh
Q 003909 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (787)
Q Consensus 325 ~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (787)
+|+++|+.+.+|.|+++|++|||||||||+|+|++.++...+.. ..
T Consensus 261 ~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------------------------~~ 306 (562)
T TIGR01511 261 NGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR----------------------------------DR 306 (562)
T ss_pred CCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC----------------------------------CH
Confidence 99999999999999999999999999999999999998654211 11
Q ss_pred hHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEe
Q 003909 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (787)
Q Consensus 405 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (787)
..+..++ .+++.. ..||.+.|+++++++.+..... ....
T Consensus 307 ~~~l~~a--a~~e~~--------------s~HPia~Ai~~~~~~~~~~~~~-------------------------~~~~ 345 (562)
T TIGR01511 307 TELLALA--AALEAG--------------SEHPLAKAIVSYAKEKGITLVE-------------------------VSDF 345 (562)
T ss_pred HHHHHHH--HHHhcc--------------CCChHHHHHHHHHHhcCCCcCC-------------------------CCCe
Confidence 2222222 222221 2489999999999877643210 0001
Q ss_pred EeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhc
Q 003909 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (787)
Q Consensus 485 ~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~ 564 (787)
..++ .+.+...+ ++ ..+..|+++.+.+. +.. .++ +.. +|.+++.++
T Consensus 346 ~~~~----g~Gi~~~~--~g--~~~~iG~~~~~~~~---------~~~--~~~------------~~~-~g~~~~~~~-- 391 (562)
T TIGR01511 346 KAIP----GIGVEGTV--EG--TKIQLGNEKLLGEN---------AIK--IDG------------KAE-QGSTSVLVA-- 391 (562)
T ss_pred EEEC----CceEEEEE--CC--EEEEEECHHHHHhC---------CCC--CCh------------hhh-CCCEEEEEE--
Confidence 1111 11222222 23 23567998876432 111 110 112 666666554
Q ss_pred cCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc
Q 003909 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (787)
Q Consensus 565 ~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~ 644 (787)
.|.+++|++.++|+++|+++++|++|+++|++++|+|||+...+..+++++|++
T Consensus 392 --------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------ 445 (562)
T TIGR01511 392 --------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------ 445 (562)
T ss_pred --------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------
Confidence 578999999999999999999999999999999999999999999999999984
Q ss_pred chhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCee
Q 003909 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724 (787)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v 724 (787)
+|++..|++|.++++.++..++.|+|+|||.||++|++.||+||+||++++.+++.||++
T Consensus 446 --------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advv 505 (562)
T TIGR01511 446 --------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVV 505 (562)
T ss_pred --------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEE
Confidence 466788999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 725 LADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 725 ~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
+.++++..+.++++.||++++++++|+.|++.+|+..+
T Consensus 506 l~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 506 LMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAI 543 (562)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997543
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=5.7e-72 Score=631.23 Aligned_cols=506 Identities=27% Similarity=0.380 Sum_probs=422.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCC-eEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG-CFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g-~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
.|.++..++++++++.+++.++++|+++.++++.+..+..++|+|+| ++++|++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 46688899999999999999999999999999999999999999996 99999999999999999999999999999996
Q ss_pred ecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCC
Q 003909 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (787)
Q Consensus 165 ~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~ 244 (787)
|.+.||||++|||+.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.+|++.+.+.+++.+++
T Consensus 97 ---g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 160 (556)
T TIGR01525 97 ---GESEVDESALTGESMPVEKKE-------------GDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKA 160 (556)
T ss_pred ---cceEEeehhccCCCCCEecCC-------------cCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCC
Confidence 678999999999999999987 4679999999999999999999999999999999998888999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhh
Q 003909 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (787)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~ 324 (787)
++++.+++++.++++++++++++.++++...... ..+..++++++++|||+|+++++++...+..++++
T Consensus 161 ~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~-----------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~ 229 (556)
T TIGR01525 161 PIQRLADRIASYYVPAVLAIALLTFVVWLALGAL-----------GALYRALAVLVVACPCALGLATPVAILVAIGVAAR 229 (556)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHH
Confidence 9999999999999999999999888877543211 45778899999999999999999999999999999
Q ss_pred ccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCCh
Q 003909 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (787)
Q Consensus 325 ~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (787)
+|+++|+++++|.||++|++|||||||||+|+|+|.++...+... ...
T Consensus 230 ~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--------------------------------~~~ 277 (556)
T TIGR01525 230 RGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS--------------------------------ISE 277 (556)
T ss_pred CCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------------------------ccH
Confidence 999999999999999999999999999999999999987542110 001
Q ss_pred hHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEe
Q 003909 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (787)
Q Consensus 405 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (787)
..+..++ ..+. ....||.+.|+++++++.|..... .+ ..
T Consensus 278 ~~~l~~a--~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~------------------------~~-~~ 316 (556)
T TIGR01525 278 EELLALA--AALE--------------QSSSHPLARAIVRYAKKRGLELPK------------------------QE-DV 316 (556)
T ss_pred HHHHHHH--HHHh--------------ccCCChHHHHHHHHHHhcCCCccc------------------------cc-Ce
Confidence 1222221 1111 113589999999999877653210 00 00
Q ss_pred EeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhc
Q 003909 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (787)
Q Consensus 485 ~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~ 564 (787)
..+ +. +.....+ ++. ..+..|+++.+ + . ++. .. ...+..+..+.. +|++++.++
T Consensus 317 ~~~---~~-~gi~~~~--~g~-~~~~lg~~~~~-~-~-------~~~--~~-----~~~~~~~~~~~~-~g~~~~~v~-- 370 (556)
T TIGR01525 317 EEV---PG-KGVEATV--DGQ-EEVRIGNPRLL-E-L-------AAE--PI-----SASPDLLNEGES-QGKTVVFVA-- 370 (556)
T ss_pred eEe---cC-CeEEEEE--CCe-eEEEEecHHHH-h-h-------cCC--Cc-----hhhHHHHHHHhh-CCcEEEEEE--
Confidence 111 11 1122222 221 23456777655 1 1 111 00 111233344555 888888877
Q ss_pred cCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc
Q 003909 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAG-IRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643 (787)
Q Consensus 565 ~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~g-i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~ 643 (787)
.|.+++|.+.++|+++|+++++|++|+++| ++++++|||+...+..+++++|++.
T Consensus 371 --------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------- 426 (556)
T TIGR01525 371 --------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------- 426 (556)
T ss_pred --------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------
Confidence 366899999999999999999999999999 9999999999999999999999965
Q ss_pred cchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe
Q 003909 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723 (787)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~ 723 (787)
+|++..|++|.++++.++..++.|+|+|||.||++|++.||+||++|++++.+++.||+
T Consensus 427 ---------------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~ 485 (556)
T TIGR01525 427 ---------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADI 485 (556)
T ss_pred ---------------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCE
Confidence 77888999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 724 v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
++.++++.++.++++.||++++++++++.|++.+|+..+
T Consensus 486 vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i 524 (556)
T TIGR01525 486 VLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524 (556)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999996544
No 28
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.1e-71 Score=623.61 Aligned_cols=487 Identities=43% Similarity=0.586 Sum_probs=421.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceE
Q 003909 94 LLILAANAAVGVITETNAEKALEELRA--YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (787)
Q Consensus 94 l~~~~~~~~l~~~~~~~~~~~~~~l~~--~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~ 171 (787)
+++++++.+++.++++++++..+.+.+ ..+.+++|+|+| ++.|++++|+|||+|.+++||+|||||++++ |.+.
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~ 78 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCF 78 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEE
Confidence 345566777888899999999999988 778899999999 9999999999999999999999999999996 6899
Q ss_pred EecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHH
Q 003909 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (787)
Q Consensus 172 vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~ 251 (787)
||||+|||||.|+.|.+ ++.+++||.+.+|.+.+.|+.+|.+|..+++...+..+...++++++..+
T Consensus 79 vdes~LTGEs~pv~k~~-------------g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~ 145 (499)
T TIGR01494 79 VDESNLTGESVPVLKTA-------------GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLD 145 (499)
T ss_pred EEcccccCCCCCeeecc-------------CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHH
Confidence 99999999999999987 44589999999999999999999999999999988887777899999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhcccccc
Q 003909 252 EFG-TFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVR 330 (787)
Q Consensus 252 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k 330 (787)
++. .++++++++++++.+++|...+... ..+...+..++++++++|||+|+++++++...+..+++++|+++|
T Consensus 146 ~~~~~~~~~~~~~la~~~~~~~~~~~~~~------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk 219 (499)
T TIGR01494 146 RLSDIIFILFVLLIALAVFLFWAIGLWDP------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVR 219 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccc------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEe
Confidence 999 7888888888888777765432110 024567888999999999999999999999999999999999999
Q ss_pred ccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHH
Q 003909 331 SLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHI 410 (787)
Q Consensus 331 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (787)
+++.+|.||++|++|||||||||+|+|++.++.+.+.
T Consensus 220 ~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------------- 256 (499)
T TIGR01494 220 SLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------------- 256 (499)
T ss_pred chhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC-------------------------------------------
Confidence 9999999999999999999999999999999864310
Q ss_pred HHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCC
Q 003909 411 ARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFS 490 (787)
Q Consensus 411 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~ 490 (787)
++..+||.+.|++.+++..+ +...||+
T Consensus 257 --------------------~~~s~hp~~~ai~~~~~~~~---------------------------------~~~~~f~ 283 (499)
T TIGR01494 257 --------------------EYLSGHPDERALVKSAKWKI---------------------------------LNVFEFS 283 (499)
T ss_pred --------------------CcCCCChHHHHHHHHhhhcC---------------------------------cceeccC
Confidence 01235899999998875311 1356899
Q ss_pred CCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccc
Q 003909 491 RDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINR 570 (787)
Q Consensus 491 ~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~ 570 (787)
+.+++|+++++.+++ .|+||+++.+.+.|.+ +.+...+++. +|+|++++|++
T Consensus 284 ~~~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~-------------------~~~~~~~~~~-~g~~~~~~a~~------ 335 (499)
T TIGR01494 284 SVRKRMSVIVRGPDG--TYVKGAPEFVLSRVKD-------------------LEEKVKELAQ-SGLRVLAVASK------ 335 (499)
T ss_pred CCCceEEEEEecCCc--EEEeCCHHHHHHhhHH-------------------HHHHHHHHHh-CCCEEEEEEEC------
Confidence 999999999986433 4789999999998842 1122334555 89999999853
Q ss_pred cCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhcc
Q 003909 571 QTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEE 650 (787)
Q Consensus 571 ~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~ 650 (787)
.+++|++.++|++|+++.++|+.|+++|++++|+|||+..++..+|+++|+
T Consensus 336 ----------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------------------- 386 (499)
T TIGR01494 336 ----------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------------------- 386 (499)
T ss_pred ----------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------------------
Confidence 379999999999999999999999999999999999999999999999985
Q ss_pred CChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCc
Q 003909 651 LPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNF 730 (787)
Q Consensus 651 ~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~ 730 (787)
+++.+|++|.++++.++..|+.|+|+|||.||++|+++||+||+|+ ++++||+++.++++
T Consensus 387 ---------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l 446 (499)
T TIGR01494 387 ---------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNL 446 (499)
T ss_pred ---------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCH
Confidence 4568999999999999999999999999999999999999999997 68899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 003909 731 ATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDT 776 (787)
Q Consensus 731 ~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~ 776 (787)
..+..++++||++++++++++.|++.+|+..+.+.+.+.++.+..+
T Consensus 447 ~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~~~~~~~ 492 (499)
T TIGR01494 447 STIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAVLNLVPP 492 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999887666655554444333
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.4e-71 Score=621.57 Aligned_cols=485 Identities=26% Similarity=0.382 Sum_probs=410.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~ 165 (787)
.|+++..++++++++.+++.++++|+++.++++.+..+.+++|+|+|+++++++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~- 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS- 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe-
Confidence 5788888999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCc
Q 003909 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (787)
Q Consensus 166 ~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~ 245 (787)
|.+.||||++||||.|+.|.+ ++.+|+||.+.+|.++++|++||.+|.+|++.+.+.+++.++++
T Consensus 96 --g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~ 160 (536)
T TIGR01512 96 --GTSTVDESALTGESVPVEKAP-------------GDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAK 160 (536)
T ss_pred --CcEEEEecccCCCCCcEEeCC-------------CCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCCh
Confidence 678999999999999999987 45699999999999999999999999999999999988888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhc
Q 003909 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (787)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~ 325 (787)
+++.+++++.+++++++.++++.++++..... +...+.+++++++++|||+|+++++++...+..+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 161 TQRFIDRFARYYTPVVLAIALAIWLVPGLLKR----------WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 99999999999999999988888877653221 11256778999999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChh
Q 003909 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (787)
Q Consensus 326 ~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (787)
|+++|+++++|++|++|++|||||||||+|+|+|.++...
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------------------------- 270 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------------------------- 270 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------------------------------
Confidence 9999999999999999999999999999999999987421
Q ss_pred HHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeE
Q 003909 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (787)
Q Consensus 406 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (787)
.+..++. ++. ....||.+.|+++++++.+ .. ....
T Consensus 271 ~~l~~a~--~~e--------------~~~~hp~~~Ai~~~~~~~~--~~---------------------------~~~~ 305 (536)
T TIGR01512 271 EVLRLAA--AAE--------------QASSHPLARAIVDYARKRE--NV---------------------------ESVE 305 (536)
T ss_pred HHHHHHH--HHh--------------ccCCCcHHHHHHHHHHhcC--CC---------------------------cceE
Confidence 1112211 111 1235899999999987653 10 0011
Q ss_pred eecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhcc
Q 003909 486 ILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQ 565 (787)
Q Consensus 486 ~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~ 565 (787)
.+| . +.+... .+++. +..|+++.+.+.. . . .+.. +|.+++.++
T Consensus 306 ~~~---g-~gi~~~--~~g~~--~~ig~~~~~~~~~---------~----~------------~~~~-~~~~~~~v~--- 348 (536)
T TIGR01512 306 EVP---G-EGVRAV--VDGGE--VRIGNPRSLEAAV---------G----A------------RPES-AGKTIVHVA--- 348 (536)
T ss_pred Eec---C-CeEEEE--ECCeE--EEEcCHHHHhhcC---------C----c------------chhh-CCCeEEEEE---
Confidence 111 1 111111 13332 3458876553311 0 0 1112 454444333
Q ss_pred CCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc
Q 003909 566 MPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (787)
Q Consensus 566 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi-~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~ 644 (787)
.|..++|.+.++|+++|+++++|++|+++|+ +++++|||+...+..+++++|++.
T Consensus 349 -------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~----------- 404 (536)
T TIGR01512 349 -------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE----------- 404 (536)
T ss_pred -------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-----------
Confidence 4789999999999999999999999999999 999999999999999999999976
Q ss_pred chhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCe
Q 003909 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDM 723 (787)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~ 723 (787)
+|++..|++|.++++.++..++.|+|+|||.||++|++.||+||++| ++++.+++.||+
T Consensus 405 --------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 405 --------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADV 464 (536)
T ss_pred --------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCE
Confidence 56778899999999999999999999999999999999999999999 889999999999
Q ss_pred eccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 724 v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
++.++++..+.++++.||++++++++|+.|++.||+..+
T Consensus 465 vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i 503 (536)
T TIGR01512 465 VLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLI 503 (536)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999995444
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.9e-70 Score=646.37 Aligned_cols=504 Identities=25% Similarity=0.325 Sum_probs=422.2
Q ss_pred chh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeee
Q 003909 87 FLE-PSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (787)
Q Consensus 87 ~~~-~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~ 165 (787)
|++ +..+++++.++.+++.+.+.|+++.+++|.+..|+.++++|+|++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~- 363 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ- 363 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-
Confidence 444 677788889999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCc
Q 003909 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (787)
Q Consensus 166 ~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~ 245 (787)
|.+.||||+|||||.|+.|.+ ++.||+||.+.+|.+.++|+++|.+|.++++.+++.+++..+++
T Consensus 364 --g~~~vdeS~lTGEs~pv~k~~-------------gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~ 428 (834)
T PRK10671 364 --GEAWLDEAMLTGEPIPQQKGE-------------GDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPE 428 (834)
T ss_pred --ceEEEeehhhcCCCCCEecCC-------------CCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCc
Confidence 678999999999999999988 45699999999999999999999999999999999998888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhc
Q 003909 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (787)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~ 325 (787)
+++..++++.++++++++++++.+++|+..... ..+...+.+++++++++|||+|++++|+++..+..+++++
T Consensus 429 ~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~-------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~ 501 (834)
T PRK10671 429 IGQLADKISAVFVPVVVVIALVSAAIWYFFGPA-------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEF 501 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHC
Confidence 999999999999999999998888777543211 1234567789999999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChh
Q 003909 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (787)
Q Consensus 326 ~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (787)
|+++|+.+.+|.++++|++|||||||||+|+|+|.++...+.. ...
T Consensus 502 gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------------------------~~~ 547 (834)
T PRK10671 502 GVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV----------------------------------DEA 547 (834)
T ss_pred CeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC----------------------------------CHH
Confidence 9999999999999999999999999999999999987643211 011
Q ss_pred HHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeE
Q 003909 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (787)
Q Consensus 406 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (787)
.+..+ +.+++.. ..||.+.|++++++....... ..++
T Consensus 548 ~~l~~--a~~~e~~--------------s~hp~a~Ai~~~~~~~~~~~~------------------------~~~~--- 584 (834)
T PRK10671 548 QALRL--AAALEQG--------------SSHPLARAILDKAGDMTLPQV------------------------NGFR--- 584 (834)
T ss_pred HHHHH--HHHHhCC--------------CCCHHHHHHHHHHhhCCCCCc------------------------ccce---
Confidence 12222 2222221 258999999988753221100 0000
Q ss_pred eecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhcc
Q 003909 486 ILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQ 565 (787)
Q Consensus 486 ~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~ 565 (787)
.+ +. +.+... .++. .+.+|+++.+.+.. . . +..+.+.++.+.. +|.+++.+++
T Consensus 585 ~~---~g-~Gv~~~--~~g~--~~~~G~~~~~~~~~---------~----~---~~~~~~~~~~~~~-~g~~~v~va~-- 637 (834)
T PRK10671 585 TL---RG-LGVSGE--AEGH--ALLLGNQALLNEQQ---------V----D---TKALEAEITAQAS-QGATPVLLAV-- 637 (834)
T ss_pred Ee---cc-eEEEEE--ECCE--EEEEeCHHHHHHcC---------C----C---hHHHHHHHHHHHh-CCCeEEEEEE--
Confidence 00 01 111111 1332 34669999764421 1 1 1223444555555 8888888773
Q ss_pred CCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc
Q 003909 566 MPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA 645 (787)
Q Consensus 566 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~ 645 (787)
|..++|++.+.|+++|+++++|++|++.|++++|+|||+..++..+++++|++.
T Consensus 638 --------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------ 691 (834)
T PRK10671 638 --------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------ 691 (834)
T ss_pred --------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------
Confidence 568999999999999999999999999999999999999999999999999975
Q ss_pred hhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeec
Q 003909 646 SEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVL 725 (787)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~ 725 (787)
+|++..|++|.++++.++..++.|+|+|||.||++|++.||+||+||++++.++++||+++
T Consensus 692 -------------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl 752 (834)
T PRK10671 692 -------------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITL 752 (834)
T ss_pred -------------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEE
Confidence 7888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 726 ADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 726 ~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
.++++.++.++++.||+++.++++|+.|++.||++.+
T Consensus 753 ~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i 789 (834)
T PRK10671 753 MRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGI 789 (834)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999996544
No 31
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=9.4e-72 Score=636.45 Aligned_cols=711 Identities=21% Similarity=0.249 Sum_probs=530.0
Q ss_pred HHhhcCCCCCCCCcCcc---HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 003909 32 HVRIYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITE 108 (787)
Q Consensus 32 ~~~~~g~N~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~ 108 (787)
+...|-.|.+.+.|++. +++++++||++..++++++.++++++. +. ..+.|...+.+++++.++..-+.+.+
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~----~~~~~~~~~pl~~vl~~t~iKd~~eD 102 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS----PFNPYTTLVPLLFVLGITAIKDAIED 102 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc----ccCccceeeceeeeehHHHHHHHHhh
Confidence 55588999999888755 589999999999999999999998877 33 22334444455555554444444333
Q ss_pred HHHHHHHHHHHhcCCCeeEEEeCCe-EEEeecCCCCCCcEEEecCCCccccceeeeeec--CCceEEecccccCCccccc
Q 003909 109 TNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTGESCSVE 185 (787)
Q Consensus 109 ~~~~~~~~~l~~~~~~~~~v~r~g~-~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~--~g~~~vdes~ltGEs~pv~ 185 (787)
+|..+.=. +.+..++.|.|++. +++..|++|++||+|++..++.+|||.++++++ +|.|+|++++|+||+..+.
T Consensus 103 ~rR~~~D~---~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 103 YRRHKQDK---EVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred hhhhhccH---HhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 33322221 12334678888644 899999999999999999999999999999644 5889999999999999887
Q ss_pred ccccccccc---------------------------------ccC-CCCCCceEeeccEEec-ceEEEEEEEecchhhhh
Q 003909 186 KELDSIIAT---------------------------------NAV-YQDKTNILFSGTVVVA-GRARAVVVGVGANTAMG 230 (787)
Q Consensus 186 k~~~~~~~~---------------------------------~~~-~~~~~~~l~~Gt~v~~-g~~~~~V~~tg~~T~~~ 230 (787)
|........ ... +....+++.+|+.+.+ .++.+.|+.||++|.++
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~ 259 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLM 259 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHH
Confidence 754222110 011 5566788999999986 57899999999999664
Q ss_pred HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-------CCCCc---chhhHHHHHHHHHHHHH
Q 003909 231 SIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-------PSHGG---FLRGAIHYFKIAVALAV 300 (787)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~i~~l~ 300 (787)
+ +...+..+++++++.++.+...+..+.+.++++..+....+... .++.. ........|..++.++.
T Consensus 260 ~---n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~ 336 (1151)
T KOG0206|consen 260 Q---NSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQ 336 (1151)
T ss_pred H---hcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhh
Confidence 4 34446778889999999988888888777777776655444321 11111 11233455667777888
Q ss_pred HhcCCchHHHHHHHHHHHHHHhh----------hccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccc
Q 003909 301 AAIPEGLPAVVTTCLALGTKRMA----------RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (787)
Q Consensus 301 ~~~P~~l~~~~~~~~~~~~~~l~----------~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~ 370 (787)
..+|.+|++.+.+....++..+. .....+|+.+..|+||+|++|+.|||||||+|.|.+.+|.+.+..+.
T Consensus 337 ~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg 416 (1151)
T KOG0206|consen 337 YLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYG 416 (1151)
T ss_pred ceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccc
Confidence 99999999999999999886654 34688999999999999999999999999999999999999887665
Q ss_pred CcceeEE-eecCcc------ccCCCccccCCCccc--cC-CCChhHHHHHHHHhhhcccccccccCCC-CCceeccChhH
Q 003909 371 GPIIAEY-GVTGTT------YAPEGVVFDSSGIQL--EF-PAQLPCLLHIARCSALCNESVLQYNPDK-GNYEKIGEATE 439 (787)
Q Consensus 371 ~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 439 (787)
....+.. ...... ....+..+.+..... +. ....+....+..++++||+......++. ...+...+|+|
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE 496 (1151)
T KOG0206|consen 417 RNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDE 496 (1151)
T ss_pred cCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcH
Confidence 4322110 000000 000111111111000 00 0245566788899999999877653333 45778899999
Q ss_pred HHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeC-CeeEEEEeCChHHHH
Q 003909 440 VALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVL 518 (787)
Q Consensus 440 ~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~-~~~~~~~kG~~e~il 518 (787)
.|++..|+..|+....+.+..+...... ....|+++..++|+|.||||||||+.+ ++..+||||++..|.
T Consensus 497 ~AlV~aAr~~gf~f~~Rt~~~vti~~~g---------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~ 567 (1151)
T KOG0206|consen 497 AALVEAARELGFVFLGRTPDSVTIRELG---------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIF 567 (1151)
T ss_pred HHHHHHHHhcCceeeeccCceEEEeccc---------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhH
Confidence 9999999999999988876665544111 245899999999999999999999986 589999999999999
Q ss_pred HhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccC------------CC----------CC
Q 003909 519 SRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT------------LS----------YD 576 (787)
Q Consensus 519 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~------------~~----------~~ 576 (787)
+++.. .....+++-.+++++|+. +|+|++++|||.+++++.. .. ..
T Consensus 568 erL~~-----------~~~~~~e~T~~Hl~~yA~-eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~ 635 (1151)
T KOG0206|consen 568 ERLSK-----------NGEKLREKTQEHLEEYAT-EGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEE 635 (1151)
T ss_pred hhhhh-----------cchHHHHHHHHHHHHHHh-hhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHH
Confidence 99964 123456667788999998 9999999999999853210 00 11
Q ss_pred CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc------------------
Q 003909 577 DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF------------------ 638 (787)
Q Consensus 577 ~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~------------------ 638 (787)
.|+||+++|..++||+++++++++|..|++||||+|++|||..+||..++..|++....-..
T Consensus 636 iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~ 715 (1151)
T KOG0206|consen 636 IEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATA 715 (1151)
T ss_pred HHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHH
Confidence 18999999999999999999999999999999999999999999999999999997653210
Q ss_pred -------------------------ccccccchhhccCChH-HHHH-----hhccceEEEecChhhHHHHHHHHhhC-CC
Q 003909 639 -------------------------VGRSYTASEFEELPAM-QQTV-----ALQHMALFTRVEPSHKRMLVEALQNQ-NE 686 (787)
Q Consensus 639 -------------------------~~~~~~~~~~~~~~~~-~~~~-----~~~~~~v~~~~~p~~K~~~v~~l~~~-~~ 686 (787)
.+.+++|..+....+. .... .-++..++||++|.||+.+++..++. +.
T Consensus 716 ~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~ 795 (1151)
T KOG0206|consen 716 ALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKA 795 (1151)
T ss_pred HHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCc
Confidence 0112222222111111 1111 11256789999999999999999754 78
Q ss_pred EEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 687 VVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (787)
Q Consensus 687 ~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~ 765 (787)
.+++||||.||++|++.|||||.++ .+..++..+||+.+....+..-.. +-|||+.|.|+.+++.|.++.|+...+.+
T Consensus 796 ~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLL-LVHGhW~Y~R~a~~ilyfFYKNi~f~~~~ 874 (1151)
T KOG0206|consen 796 VTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLL-LVHGHWSYIRLAKMILYFFYKNIAFTFTL 874 (1151)
T ss_pred eEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhh-eeecceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999986 788899999999998765544433 35999999999999999999999999999
Q ss_pred HHHHHhcCCC
Q 003909 766 FVAAVLGIPD 775 (787)
Q Consensus 766 ~~~~~~~~~~ 775 (787)
|.+.++..++
T Consensus 875 fwy~f~~gfS 884 (1151)
T KOG0206|consen 875 FWYQFFNGFS 884 (1151)
T ss_pred HHhhhcCCCC
Confidence 8888877664
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-68 Score=563.23 Aligned_cols=643 Identities=24% Similarity=0.327 Sum_probs=454.7
Q ss_pred CCCCH-HHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHH
Q 003909 22 KGLTD-SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (787)
Q Consensus 22 ~GLs~-~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 100 (787)
+|+.. .++.+....||+|+.+.+.+ +|-.+|.+.-..+++.+..++..+++.- .+|+.++.-+++++.-
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vP-tF~eLFkE~A~aPfFVFQVFcvgLWCLD---------eyWYySlFtLfMli~f 230 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVP-TFSELFKEHAVAPFFVFQVFCVGLWCLD---------EYWYYSLFTLFMLIAF 230 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCc-cHHHHHHHhccCceeeHhHHhHHHHHhH---------HHHHHHHHHHHHHHHH
Confidence 46653 45555556699999988665 6778888877777776666554444322 3445544444444332
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--CCCeeEEEeCCeEEEeecCCCCCCcEEEecC---CCccccceeeeeecCCceEEecc
Q 003909 101 AAVGVITETNAEKALEELRAY--QADIATVLRNGCFSILPAAELVPGDIVEVNV---GCKIPADMRMIEMLSNQLRVDQA 175 (787)
Q Consensus 101 ~~l~~~~~~~~~~~~~~l~~~--~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~---G~~vPaD~~il~~~~g~~~vdes 175 (787)
..--+.|+. +.+.+++++ .+..+.|+|+++|+.+.+++|.|||+|.|.. ...||||.+++. |.|.|||+
T Consensus 231 E~tlV~Qrm---~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~---GsciVnEa 304 (1160)
T KOG0209|consen 231 EATLVKQRM---RTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR---GSCIVNEA 304 (1160)
T ss_pred HHHHHHHHH---HHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEe---cceeechh
Confidence 222233333 344445444 4556899999999999999999999999977 578999999995 99999999
Q ss_pred cccCCcccccccccccccccc----CCCCCCceEeeccEEec-------------ceEEEEEEEecchhhhhHHHHHhcc
Q 003909 176 ILTGESCSVEKELDSIIATNA----VYQDKTNILFSGTVVVA-------------GRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 176 ~ltGEs~pv~k~~~~~~~~~~----~~~~~~~~l~~Gt~v~~-------------g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
+|||||.|..|.+....+... ...++.+++|+||.+++ |-+.+.|++||.+|..|++.+.+..
T Consensus 305 MLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf 384 (1160)
T KOG0209|consen 305 MLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILF 384 (1160)
T ss_pred hhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEe
Confidence 999999999998754443222 12235679999999984 7899999999999999999999888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWI-VNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLAL 317 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~ 317 (787)
...+.+.-.... + +++.+.+++++++.. +|.--..++ .+.-+..|.-++.++...+|+-||+-++++...
T Consensus 385 ~aervTaNn~Et--f--~FILFLlVFAiaAa~Yvwv~Gskd~-----~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNs 455 (1160)
T KOG0209|consen 385 SAERVTANNRET--F--IFILFLLVFAIAAAGYVWVEGSKDP-----TRSRYKLFLECTLILTSVVPPELPMELSMAVNS 455 (1160)
T ss_pred cceeeeeccHHH--H--HHHHHHHHHHHHhhheEEEecccCc-----chhhhheeeeeeEEEeccCCCCCchhhhHHHHH
Confidence 655555433322 2 222222222222211 111001111 122234455566677888999999999999999
Q ss_pred HHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCcc
Q 003909 318 GTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQ 397 (787)
Q Consensus 318 ~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (787)
+...|+|.+++|..+=++.-.|++|.-|||||||||+..|.|+++.-...... . .... +
T Consensus 456 SL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~-~------~~~~----------s---- 514 (1160)
T KOG0209|consen 456 SLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEG-A------LTPA----------S---- 514 (1160)
T ss_pred HHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcc-c------ccch----------h----
Confidence 99999999999999999999999999999999999999999999865322110 0 0000 0
Q ss_pred ccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccc
Q 003909 398 LEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHW 477 (787)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (787)
......+.-++.|+++.. .+ ....|||.|+|.+.. .|+.....+. ..++ +..
T Consensus 515 ---~~p~~t~~vlAscHsLv~-----le-----~~lVGDPlEKA~l~~---v~W~~~k~~~----v~p~--------~~~ 566 (1160)
T KOG0209|consen 515 ---KAPNETVLVLASCHSLVL-----LE-----DKLVGDPLEKATLEA---VGWNLEKKNS----VCPR--------EGN 566 (1160)
T ss_pred ---hCCchHHHHHHHHHHHHH-----hc-----CcccCChHHHHHHHh---cCcccccCcc----cCCC--------cCC
Confidence 011233444444444322 11 125799999998864 4554421110 0000 001
Q ss_pred cccccEeEeecCCCCCceEEEEEeeCC-----eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhc
Q 003909 478 EIEFKKVSILEFSRDRKMMSVLCSHKQ-----MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAG 552 (787)
Q Consensus 478 ~~~~~~l~~~~f~~~~~~~sviv~~~~-----~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (787)
....++.+.+.|+|..|||||++...+ ++++.+||+||.|.++.+... ...++...+|+.
T Consensus 567 ~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP---------------~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 567 GKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVP---------------KDYDEIYKRYTR 631 (1160)
T ss_pred CcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCc---------------hhHHHHHHHHhh
Confidence 125677888999999999999988753 688999999999998875433 225556677887
Q ss_pred cccchhhhhhhccCCccccC----CCCC-CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003909 553 KEALRCLALALKQMPINRQT----LSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (787)
Q Consensus 553 ~~g~~~l~~a~~~~~~~~~~----~~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~ 627 (787)
+|.||+|++||+++.-... ...+ .|+|+.|.|++.|.-|++++++++|++|++.+++++|+|||++.+|.++|+
T Consensus 632 -~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak 710 (1160)
T KOG0209|consen 632 -QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAK 710 (1160)
T ss_pred -ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehh
Confidence 9999999999999843221 2222 289999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCccc-----------------c--------------------ccccccchhhccCChH-HHHHhhccceEEEec
Q 003909 628 KIGAFDHLVD-----------------F--------------------VGRSYTASEFEELPAM-QQTVALQHMALFTRV 669 (787)
Q Consensus 628 ~~gi~~~~~~-----------------~--------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~ 669 (787)
++||....-. . .+.+++|+.++.+... .....+..+.||+|+
T Consensus 711 ~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARv 790 (1160)
T KOG0209|consen 711 EVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARV 790 (1160)
T ss_pred eeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEee
Confidence 9998754110 0 0123344444443332 334555678899999
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh------------------------------
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS------------------------------ 719 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~------------------------------ 719 (787)
.|.||..++..+++.|+.++|+|||.||+++||.||||||+=|+.+..++
T Consensus 791 aP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 870 (1160)
T KOG0209|consen 791 APKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPP 870 (1160)
T ss_pred ChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCC
Confidence 99999999999999999999999999999999999999997433321111
Q ss_pred -----------------------------------------hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 720 -----------------------------------------ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYM 754 (787)
Q Consensus 720 -----------------------------------------~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~ 754 (787)
+|.+.....+.++|.++|+.||+++-++.|++...
T Consensus 871 ~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL 946 (1160)
T KOG0209|consen 871 VPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL 946 (1160)
T ss_pred CCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 33444445567889999999999999999988753
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-59 Score=475.25 Aligned_cols=522 Identities=25% Similarity=0.346 Sum_probs=403.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eeEEEeC-CeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEE
Q 003909 95 LILAANAAVGVITETNAEKALEELRAYQAD-IATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRV 172 (787)
Q Consensus 95 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~v~r~-g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~v 172 (787)
+.+++..+-+.+.|-|.+.....|++.+.+ .++++++ |.++.|++.+|+.||+|.++.||.||+||.+++ |..+|
T Consensus 74 fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asV 150 (681)
T COG2216 74 FTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASV 150 (681)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe---eeeec
Confidence 334455566677777877777777665543 3566665 899999999999999999999999999999997 77889
Q ss_pred ecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHH
Q 003909 173 DQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDE 252 (787)
Q Consensus 173 des~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (787)
|||.+||||-||-|+.+.- .+-+-.||.+++.+++.+++....+|.+.++..+++.++++++|.+-.+.-
T Consensus 151 dESAITGESaPViresGgD----------~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~i 220 (681)
T COG2216 151 DESAITGESAPVIRESGGD----------FSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTI 220 (681)
T ss_pred chhhccCCCcceeeccCCC----------cccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHH
Confidence 9999999999999987621 123889999999999999999999999999999999999999997776654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhcccccccc
Q 003909 253 FGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSL 332 (787)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~ 332 (787)
+..-+..+.+++....+-+. .|.. .. .......++++++.+|-.+.-.++..-..++.|+.+.+++.++.
T Consensus 221 LL~~LTliFL~~~~Tl~p~a--~y~~---g~-----~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SG 290 (681)
T COG2216 221 LLSGLTLIFLLAVATLYPFA--IYSG---GG-----AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSG 290 (681)
T ss_pred HHHHHHHHHHHHHHhhhhHH--HHcC---CC-----CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCc
Confidence 43333222222211111111 1110 00 01244568899999999999999988889999999999999999
Q ss_pred ccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHH
Q 003909 333 PSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIAR 412 (787)
Q Consensus 333 ~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (787)
++.|..|.+|++..|||||+|-|+-.-.++.+.+... ..+++.
T Consensus 291 RAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~-------------------------------------~~~la~ 333 (681)
T COG2216 291 RAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVS-------------------------------------EEELAD 333 (681)
T ss_pred chhhhcCCccEEEecccCceeecchhhhheecCCCCC-------------------------------------HHHHHH
Confidence 9999999999999999999999987777766553221 223344
Q ss_pred HhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCcccccccc-EeEeecCCC
Q 003909 413 CSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFK-KVSILEFSR 491 (787)
Q Consensus 413 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~f~~ 491 (787)
...+++-. -..|..++++.++++.+...... ... .....||+.
T Consensus 334 aa~lsSl~-------------DeTpEGrSIV~LA~~~~~~~~~~-----------------------~~~~~~~fvpFtA 377 (681)
T COG2216 334 AAQLASLA-------------DETPEGRSIVELAKKLGIELRED-----------------------DLQSHAEFVPFTA 377 (681)
T ss_pred HHHHhhhc-------------cCCCCcccHHHHHHHhccCCCcc-----------------------cccccceeeecce
Confidence 33333211 02466688999999887443110 001 235689999
Q ss_pred CCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCcccc
Q 003909 492 DRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQ 571 (787)
Q Consensus 492 ~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~ 571 (787)
+.|++.+-...+ ...-||+.+.+.+.-+.. +.. .. ..++...++-+. .|-..++++
T Consensus 378 ~TRmSGvd~~~~---~~irKGA~dai~~~v~~~-----~g~--~p----~~l~~~~~~vs~-~GGTPL~V~--------- 433 (681)
T COG2216 378 QTRMSGVDLPGG---REIRKGAVDAIRRYVRER-----GGH--IP----EDLDAAVDEVSR-LGGTPLVVV--------- 433 (681)
T ss_pred ecccccccCCCC---ceeecccHHHHHHHHHhc-----CCC--CC----HHHHHHHHHHHh-cCCCceEEE---------
Confidence 988777654333 556899999999876521 111 11 334555555555 676666665
Q ss_pred CCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccC
Q 003909 572 TLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEEL 651 (787)
Q Consensus 572 ~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~ 651 (787)
.|.+++|++.++|-++|+.+|-+.+||+.||+.+|+|||++.+|..+|++.|+++
T Consensus 434 -------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------ 488 (681)
T COG2216 434 -------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------ 488 (681)
T ss_pred -------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------
Confidence 4779999999999999999999999999999999999999999999999999998
Q ss_pred ChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCch
Q 003909 652 PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA 731 (787)
Q Consensus 652 ~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~ 731 (787)
..++++|++|.++++.-|..|+-|+|+|||.||+|+|.+||||+||.+|+..+|++++.|=+|.|+-
T Consensus 489 -------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PT 555 (681)
T COG2216 489 -------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPT 555 (681)
T ss_pred -------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCcc
Confidence 5677999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 003909 732 TIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP 774 (787)
Q Consensus 732 ~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~ 774 (787)
.+.+.++.|+..+-.=-....|+++..+.-.+.++-+.|...+
T Consensus 556 KlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~ 598 (681)
T COG2216 556 KLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAY 598 (681)
T ss_pred ceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhc
Confidence 9999999999987655555567776665555555544444444
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=3.7e-35 Score=296.21 Aligned_cols=228 Identities=32% Similarity=0.522 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-eEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceE
Q 003909 93 ILLILAANAAVGVITETNAEKALEELRAYQADI-ATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (787)
Q Consensus 93 il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~ 171 (787)
++++++++.+++.++++|+++..+++.+..+++ ++|+|||+++++++++|+|||+|.|++||++||||++++ +|.++
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~~ 79 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE--SGSAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee--ccccc
Confidence 566777788899999999999999998888877 899999999999999999999999999999999999996 69999
Q ss_pred EecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHH
Q 003909 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (787)
Q Consensus 172 vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~ 251 (787)
||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|..+++.+.....+.+++++++.++
T Consensus 80 vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred cccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 999999999999999853 345689999999999999999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccc
Q 003909 252 EFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRS 331 (787)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~ 331 (787)
++..++.+++++++++++++++.... ...+...+..+++++++++|++||++++++...+.++++++|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~ 224 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDS-------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKN 224 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGST-------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred HHHHHHHhcccccchhhhccceeccc-------ccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeC
Confidence 99999999998888888876655211 12334567788999999999999999999999999999999999999
Q ss_pred cccccc
Q 003909 332 LPSVET 337 (787)
Q Consensus 332 ~~~le~ 337 (787)
.+++|.
T Consensus 225 ~~a~E~ 230 (230)
T PF00122_consen 225 LSALEA 230 (230)
T ss_dssp TTHHHH
T ss_pred cccccC
Confidence 999884
No 35
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.95 E-value=3e-26 Score=239.33 Aligned_cols=273 Identities=18% Similarity=0.255 Sum_probs=204.8
Q ss_pred EeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCC----------------------
Q 003909 510 SKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMP---------------------- 567 (787)
Q Consensus 510 ~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~---------------------- 567 (787)
--|-.+.+.+.|+++|++ ..+.|++..+|.++.+.+.... ..-+|+++|||+..
T Consensus 696 n~g~ad~~~eACTdfWdG--adi~PlSg~dkkkV~DFY~Rac--lsG~C~AfaYkP~~caLasqL~GKciEl~~~p~~Sk 771 (1354)
T KOG4383|consen 696 NFGFADFFEEACTDFWDG--ADIIPLSGRDKKKVKDFYLRAC--LSGHCLAFAYKPCFCALASQLAGKCIELPLNPEHSK 771 (1354)
T ss_pred cccHHHHHHHHhhhhcCC--ceeeecCcchHHHHHHHHHHHh--hcccchheecccHHHHHHHHhCCceEEeccCcccch
Confidence 347778899999999987 5678999999999988887665 33469999999754
Q ss_pred ------------ccc---cCCCCC---------------CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCC
Q 003909 568 ------------INR---QTLSYD---------------DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGD 617 (787)
Q Consensus 568 ------------~~~---~~~~~~---------------~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd 617 (787)
+++ +..... .-.+.+|.|++..+.+.+++....|+.|.++.|+++..|-.
T Consensus 772 I~T~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~E 851 (1354)
T KOG4383|consen 772 IETACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKE 851 (1354)
T ss_pred hhhhccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecch
Confidence 000 000000 03578899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCcccccc--------------------------------ccccchhhccCChH-----------
Q 003909 618 NKSTAESICHKIGAFDHLVDFVG--------------------------------RSYTASEFEELPAM----------- 654 (787)
Q Consensus 618 ~~~~a~~~a~~~gi~~~~~~~~~--------------------------------~~~~~~~~~~~~~~----------- 654 (787)
+....+.+|+++|+...+++-.. ...+..+.+.+..+
T Consensus 852 dELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~ 931 (1354)
T KOG4383|consen 852 DELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQK 931 (1354)
T ss_pred HHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccc
Confidence 99999999999999987764100 00000000000000
Q ss_pred ---------------HHHHhh--------------ccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcc--CHHHHhh
Q 003909 655 ---------------QQTVAL--------------QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVN--DAPALKK 703 (787)
Q Consensus 655 ---------------~~~~~~--------------~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~N--D~~ml~~ 703 (787)
.+...+ .-+-.|.+++|+.-.++++.+|++|++++.+|...| ....+-+
T Consensus 932 ~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflk 1011 (1354)
T KOG4383|consen 932 MDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLK 1011 (1354)
T ss_pred cccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEc
Confidence 000000 012479999999999999999999999999999988 4556689
Q ss_pred CCceEecCC-------------ccHH-HHh-----------------hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHH
Q 003909 704 ADIGIAMGS-------------GTAV-AKS-----------------ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIR 752 (787)
Q Consensus 704 A~vgia~~~-------------~~~~-~~~-----------------~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~ 752 (787)
||++||+.. ++.. ..+ ++|+.......-.+..+|+.+|..+..+|+++.
T Consensus 1012 adISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfL 1091 (1354)
T KOG4383|consen 1012 ADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFL 1091 (1354)
T ss_pred cceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 999999831 1111 111 234444444566778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchhHhhhheec
Q 003909 753 YMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVN 786 (787)
Q Consensus 753 ~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 786 (787)
|.++..+...+.+|++.++.+|.-++..+++|+.
T Consensus 1092 FiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lS 1125 (1354)
T KOG4383|consen 1092 FILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLS 1125 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhccchHHHHH
Confidence 9999999999999999999999999999999964
No 36
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.84 E-value=3.7e-21 Score=192.57 Aligned_cols=97 Identities=48% Similarity=0.781 Sum_probs=91.9
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHh
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (787)
++.++|.+.+.|+++|++.++|+.|+++|++++|+|||+..++..+++++||....
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~------------------------ 170 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSI------------------------ 170 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEE------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccc------------------------
Confidence 78899999999999999999999999999999999999999999999999996533
Q ss_pred hccceEEEec--ChhhH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCC
Q 003909 660 LQHMALFTRV--EPSHK--RMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (787)
Q Consensus 660 ~~~~~v~~~~--~p~~K--~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~ 705 (787)
+|++. +|++| .++++.++..++.|+|+|||.||++|+++||
T Consensus 171 -----v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 171 -----VFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----EEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----ccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 89999 99999 9999999977779999999999999999997
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.65 E-value=1.4e-15 Score=127.73 Aligned_cols=125 Identities=22% Similarity=0.331 Sum_probs=111.4
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHh
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (787)
-+...+.++--.++-+++.++|++|++. ++++++|||...+....|+-.|++...
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------ 72 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------ 72 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee------------------------
Confidence 3467888999999999999999999999 999999999999999999999987643
Q ss_pred hccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec-C--CccHHHHhhcCeeccCCCchHHHHH
Q 003909 660 LQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-G--SGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 660 ~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~-~--~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
+|+...|+.|..+++.|+++++.|.|+|||.||.+||+.||+||+. + +....+..+||+++.+ ...+.++
T Consensus 73 -----v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 73 -----VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -----eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 8899999999999999999999999999999999999999999985 3 6778888999999975 4444444
No 38
>PRK10976 putative hydrolase; Provisional
Probab=99.56 E-value=1.8e-14 Score=148.93 Aligned_cols=149 Identities=17% Similarity=0.177 Sum_probs=104.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---chhh-------------------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASEF------------------- 648 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~~~------------------- 648 (787)
.++.+.++++|++++++|++++++|||+...+..+.+++|++.+.++.+|..+. +..+
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 469999999999999999999999999999999999999988654443321110 0000
Q ss_pred ----------------ccCCh------------------------------------HHHH---Hhhc-----cceE---
Q 003909 649 ----------------EELPA------------------------------------MQQT---VALQ-----HMAL--- 665 (787)
Q Consensus 649 ----------------~~~~~------------------------------------~~~~---~~~~-----~~~v--- 665 (787)
..... +... ..+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 177 (266)
T PRK10976 98 NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFS 177 (266)
T ss_pred cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 00000 0000 0000 0000
Q ss_pred ---EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC--eeccCCCchHHH
Q 003909 666 ---FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD--MVLADDNFATIV 734 (787)
Q Consensus 666 ---~~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad--~v~~~~~~~~i~ 734 (787)
+.+..| ..|...++.+.+. .+.|++|||+.||++||+.||+||||+||.+.+|+.|| +|+.+|+.+||+
T Consensus 178 ~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa 257 (266)
T PRK10976 178 TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVP 257 (266)
T ss_pred CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHH
Confidence 111222 2466666665543 35789999999999999999999999999999999988 788999999999
Q ss_pred HHHHH
Q 003909 735 AAVAE 739 (787)
Q Consensus 735 ~~i~~ 739 (787)
++|++
T Consensus 258 ~~l~~ 262 (266)
T PRK10976 258 HYLRK 262 (266)
T ss_pred HHHHH
Confidence 99863
No 39
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.56 E-value=1.9e-14 Score=149.09 Aligned_cols=150 Identities=16% Similarity=0.166 Sum_probs=106.0
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---ch--------------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---AS-------------------- 646 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~-------------------- 646 (787)
+..+.+.++++|++|+++|++++++|||+...+..+.+++|+..+.++.+|..+. +.
T Consensus 17 ~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~ 96 (272)
T PRK15126 17 DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQW 96 (272)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhh
Confidence 3469999999999999999999999999999999999999998654433321110 00
Q ss_pred ---------------------hh----------------ccCC------------hHH---HHHhhc-----cceE----
Q 003909 647 ---------------------EF----------------EELP------------AMQ---QTVALQ-----HMAL---- 665 (787)
Q Consensus 647 ---------------------~~----------------~~~~------------~~~---~~~~~~-----~~~v---- 665 (787)
.. ..+. .+. ....+. ...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 176 (272)
T PRK15126 97 DTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSA 176 (272)
T ss_pred hcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 00 0000 000 000000 0001
Q ss_pred --EEecChh--hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe--eccCCCchHHHH
Q 003909 666 --FTRVEPS--HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM--VLADDNFATIVA 735 (787)
Q Consensus 666 --~~~~~p~--~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~--v~~~~~~~~i~~ 735 (787)
+.+..|. .|...++.+.+. .+.|++|||+.||++||+.|++||||+||.+.+|+.||+ |+.+|+.+||++
T Consensus 177 ~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 177 TDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred CcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHH
Confidence 1122222 477777776544 357999999999999999999999999999999999997 788999999999
Q ss_pred HHHH
Q 003909 736 AVAE 739 (787)
Q Consensus 736 ~i~~ 739 (787)
+|++
T Consensus 257 ~l~~ 260 (272)
T PRK15126 257 YLTH 260 (272)
T ss_pred HHHH
Confidence 9853
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.56 E-value=2.1e-14 Score=148.12 Aligned_cols=148 Identities=25% Similarity=0.293 Sum_probs=108.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch-h-----------------------
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS-E----------------------- 647 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~-~----------------------- 647 (787)
++.+.++++|++++++|++++++|||+...+..+.+++++..+.+..+|..+... +
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 99 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQ 99 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhcc
Confidence 4999999999999999999999999999999999999999976554333111000 0
Q ss_pred -------------------------------------hccCC----------hHHHHH---hh----c-cceEE------
Q 003909 648 -------------------------------------FEELP----------AMQQTV---AL----Q-HMALF------ 666 (787)
Q Consensus 648 -------------------------------------~~~~~----------~~~~~~---~~----~-~~~v~------ 666 (787)
..... .+.... .+ . ....+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~ 179 (264)
T COG0561 100 GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPI 179 (264)
T ss_pred CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCc
Confidence 00000 000000 00 0 01111
Q ss_pred -EecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 667 -TRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 667 -~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.+..| ..|...++.+.+. .+.|++|||+.||++||+.|+.||||+||.+.+|+.||+++.+++.+||++++++
T Consensus 180 ~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 180 SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 12222 3688777777653 3469999999999999999999999999999999999999999999999999975
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.55 E-value=3e-14 Score=147.63 Aligned_cols=67 Identities=25% Similarity=0.347 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+. .+.|++||||.||++||+.||+||||+||.+.+|+.||+|+.+++.+||+++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 566666666543 3578999999999999999999999999999999999999999999999999864
No 42
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.54 E-value=4.2e-14 Score=142.82 Aligned_cols=148 Identities=22% Similarity=0.265 Sum_probs=106.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-c---chhh-----c-------------
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-T---ASEF-----E------------- 649 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~---~~~~-----~------------- 649 (787)
.+.+.+.++|++|+++|++++++|||+...+..+++++|+..+.+..+|..+ . +... +
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 4899999999999999999999999999999999999999866554443221 1 0000 0
Q ss_pred --------cC---------------ChHHHHHhhcc----ceE-----EEecChh--hHHHHHHHHhhC----CCEEEEE
Q 003909 650 --------EL---------------PAMQQTVALQH----MAL-----FTRVEPS--HKRMLVEALQNQ----NEVVAMT 691 (787)
Q Consensus 650 --------~~---------------~~~~~~~~~~~----~~v-----~~~~~p~--~K~~~v~~l~~~----~~~v~~v 691 (787)
.. ..+.....+.. ..+ +.+..|. .|...++.+.+. .+.+++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00 00000011100 001 1122332 377777666543 4578999
Q ss_pred cCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 692 GDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 692 GDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.+||++++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence 999999999999999999999999999999999999999999999863
No 43
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.50 E-value=6.9e-14 Score=139.37 Aligned_cols=147 Identities=20% Similarity=0.220 Sum_probs=106.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch--hh--ccCCh-------------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS--EF--EELPA------------- 653 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~--~~--~~~~~------------- 653 (787)
.++.+++.++|++|+++|++++++|||++..+..+++++++..+.+..+|..+... .. .....
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 35999999999999999999999999999999999999999866555444222110 00 00000
Q ss_pred ----------------------HHHHHhhcc--ceE-----EEecC--hhhHHHHHHHHhhC----CCEEEEEcCCccCH
Q 003909 654 ----------------------MQQTVALQH--MAL-----FTRVE--PSHKRMLVEALQNQ----NEVVAMTGDGVNDA 698 (787)
Q Consensus 654 ----------------------~~~~~~~~~--~~v-----~~~~~--p~~K~~~v~~l~~~----~~~v~~vGDg~ND~ 698 (787)
+.....+.. ..+ +.... ...|...++.+.+. .+.+++|||+.||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000000000 001 11222 24677777777553 34689999999999
Q ss_pred HHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHH
Q 003909 699 PALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 699 ~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
+|++.|++|+||+|+.+.+|+.||+|+.+++.+||++++
T Consensus 177 ~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 177 DLFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999999999999999999999999998764
No 44
>PLN02887 hydrolase family protein
Probab=99.49 E-value=1.8e-13 Score=152.19 Aligned_cols=67 Identities=25% Similarity=0.391 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+. .+.|++||||.||++||+.||+||||+||.+.+|+.||+|+.+|+.+||+++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 455555555443 2478999999999999999999999999999999999999999999999999864
No 45
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.47 E-value=1.3e-13 Score=109.01 Aligned_cols=69 Identities=33% Similarity=0.614 Sum_probs=65.6
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHH
Q 003909 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVIS 72 (787)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (787)
||..+++|+++.|+++...||+++||.+|+++||+|+++.++++++|+.++++|.+++++++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 899999999999999999999999999999999999999989999999999999999999999988875
No 46
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.46 E-value=4.6e-13 Score=134.79 Aligned_cols=148 Identities=20% Similarity=0.244 Sum_probs=105.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-cchh----h-ccCCh-----------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TASE----F-EELPA----------- 653 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~~~~----~-~~~~~----------- 653 (787)
..+.+.++++|++++++|++++++|||+...+..+++++|+..+.+..+|..+ .... + ..+..
T Consensus 14 ~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (225)
T TIGR01482 14 RAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT 93 (225)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcc
Confidence 35889999999999999999999999999999999999997766554333211 1000 0 00000
Q ss_pred -------------------------HHHHHhhcc----ce-----EEEecCh--hhHHHHHHHHhhC----CCEEEEEcC
Q 003909 654 -------------------------MQQTVALQH----MA-----LFTRVEP--SHKRMLVEALQNQ----NEVVAMTGD 693 (787)
Q Consensus 654 -------------------------~~~~~~~~~----~~-----v~~~~~p--~~K~~~v~~l~~~----~~~v~~vGD 693 (787)
+........ .. .+....| ..|...++.+.+. .+.+++|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 000000000 00 0112222 3677777776543 457999999
Q ss_pred CccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchH----HHHHHH
Q 003909 694 GVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT----IVAAVA 738 (787)
Q Consensus 694 g~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~----i~~~i~ 738 (787)
+.||++||+.|++|+||+|+.+.+|+.||+|+.+++.+| |.++++
T Consensus 174 ~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred CHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 777664
No 47
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.44 E-value=5.1e-13 Score=137.24 Aligned_cols=148 Identities=19% Similarity=0.226 Sum_probs=105.9
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhh-----ccC-------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEF-----EEL------------- 651 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~-----~~~------------- 651 (787)
..++.++++++|++|+++|++++++|||++..+..+.+++++..+.+..+|..+..... ..+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 35689999999999999999999999999999999999999986655443322200000 000
Q ss_pred ------------------C--------------------------------------hHH-------HHHhhccceEEE-
Q 003909 652 ------------------P--------------------------------------AMQ-------QTVALQHMALFT- 667 (787)
Q Consensus 652 ------------------~--------------------------------------~~~-------~~~~~~~~~v~~- 667 (787)
. .+. +.........+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0 000 000000000111
Q ss_pred ------ecC--hhhHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 668 ------RVE--PSHKRMLVEALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 668 ------~~~--p~~K~~~v~~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
..+ ...|...++.+.+ ..+.++++||+.||++||+.||.|+||+|+.+.+++.||+++.+++.+||++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 122 2468877777764 2468899999999999999999999999999999999999999888899998
Q ss_pred HH
Q 003909 736 AV 737 (787)
Q Consensus 736 ~i 737 (787)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 75
No 48
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.44 E-value=5.7e-13 Score=138.34 Aligned_cols=157 Identities=21% Similarity=0.267 Sum_probs=106.7
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---chh---------
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASE--------- 647 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~~--------- 647 (787)
|++++. =..++.+.++++|++++++|++++++|||+...+..+++++++..+.++.+|..+. ..+
T Consensus 11 DGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~ 87 (272)
T PRK10530 11 DGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPV 87 (272)
T ss_pred CCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCH
Confidence 555552 23468999999999999999999999999999999999999987654433221110 000
Q ss_pred ---------------------------------h-------ccCCh---------HHHHHhh---cc-ceEE--------
Q 003909 648 ---------------------------------F-------EELPA---------MQQTVAL---QH-MALF-------- 666 (787)
Q Consensus 648 ---------------------------------~-------~~~~~---------~~~~~~~---~~-~~v~-------- 666 (787)
+ ..... ......+ .. ..+.
T Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 167 (272)
T PRK10530 88 QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQ 167 (272)
T ss_pred HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHH
Confidence 0 00000 0000000 00 0000
Q ss_pred -----------------------EecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHH
Q 003909 667 -----------------------TRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVA 717 (787)
Q Consensus 667 -----------------------~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~ 717 (787)
....| ..|...++.+.+. .+.+++|||+.||++|++.||+||||+|+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~l 247 (272)
T PRK10530 168 LQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAV 247 (272)
T ss_pred HHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHH
Confidence 01111 2455555555432 357899999999999999999999999999999
Q ss_pred HhhcCeeccCCCchHHHHHHHH
Q 003909 718 KSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 718 ~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
|+.||+|+.+++.+||+++|++
T Consensus 248 k~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 248 KARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred HHhCCEEEecCCCCcHHHHHHH
Confidence 9999999999999999999863
No 49
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.40 E-value=5.8e-13 Score=111.23 Aligned_cols=91 Identities=36% Similarity=0.601 Sum_probs=71.9
Q ss_pred hhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCc
Q 003909 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRK 494 (787)
Q Consensus 415 ~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~ 494 (787)
.+||++.+..+++.......|+|+|.||+.++.+.|.... .......++++..+||+|+||
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~-------------------~~~~~~~~~~~~~~pF~S~rK 61 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID-------------------IKEIRSKYKIVAEIPFDSERK 61 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc-------------------HHHHHhhcceeEEEccCcccc
Confidence 3788887765555444447899999999999999865431 012346789999999999999
Q ss_pred eEEEEEeeCCeeEEEEeCChHHHHHhcccc
Q 003909 495 MMSVLCSHKQMCVMFSKGAPESVLSRCTNI 524 (787)
Q Consensus 495 ~~sviv~~~~~~~~~~kG~~e~il~~c~~~ 524 (787)
+|+|++++++.+.+|+||+||.|+++|+++
T Consensus 62 ~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 62 RMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred eeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 999999954557779999999999999763
No 50
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.37 E-value=6.2e-12 Score=128.84 Aligned_cols=147 Identities=20% Similarity=0.190 Sum_probs=100.9
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-cchh--------h--ccCChHHH-----
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TASE--------F--EELPAMQQ----- 656 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~~~~--------~--~~~~~~~~----- 656 (787)
..+.++++|++|+++|++++++|||+...+..+.+++|+..+.++.+|..+ .... . ..+..+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 555799999999999999999999999999999999998766655444222 1100 0 00000000
Q ss_pred ----------------------------------H--------------------Hhhc--cceE-----EEecCh--hh
Q 003909 657 ----------------------------------T--------------------VALQ--HMAL-----FTRVEP--SH 673 (787)
Q Consensus 657 ----------------------------------~--------------------~~~~--~~~v-----~~~~~p--~~ 673 (787)
. ..+. ...+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0 0000 0000 111111 24
Q ss_pred HHHHHHHHhh----C--CCEEEEEcCCccCHHHHhhCCceEecCCcc---HHHHhh--c-CeeccCCCchHHHHHHHH
Q 003909 674 KRMLVEALQN----Q--NEVVAMTGDGVNDAPALKKADIGIAMGSGT---AVAKSA--S-DMVLADDNFATIVAAVAE 739 (787)
Q Consensus 674 K~~~v~~l~~----~--~~~v~~vGDg~ND~~ml~~A~vgia~~~~~---~~~~~~--a-d~v~~~~~~~~i~~~i~~ 739 (787)
|...++.+.+ . .+.++++||+.||++||+.||+||||+|+. +.+|+. | ++|+.+++.+||++++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 5555555543 3 567999999999999999999999999998 578887 4 599999999999999864
No 51
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.33 E-value=1.3e-11 Score=127.56 Aligned_cols=157 Identities=15% Similarity=0.092 Sum_probs=103.8
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC-CCcccccccccc-chh--------h-
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVGRSYT-ASE--------F- 648 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~-~~~~~~~~~~~~-~~~--------~- 648 (787)
|++++. =+..+.+.++++|++|+++|++++++|||+...+..+++++|++ .+.+..+|..+. ... .
T Consensus 15 DGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~ 91 (271)
T PRK03669 15 DGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRI 91 (271)
T ss_pred ccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEe
Confidence 555542 13357789999999999999999999999999999999999986 344444332221 100 0
Q ss_pred -ccCChHHH---------------------------------------HH----------------------hhc--cce
Q 003909 649 -EELPAMQQ---------------------------------------TV----------------------ALQ--HMA 664 (787)
Q Consensus 649 -~~~~~~~~---------------------------------------~~----------------------~~~--~~~ 664 (787)
..+..+.. .. .+. ...
T Consensus 92 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (271)
T PRK03669 92 ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQ 171 (271)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCE
Confidence 00000000 00 000 000
Q ss_pred E-----EEecCh--hhHHHHHHHHhh-------CCCEEEEEcCCccCHHHHhhCCceEecCCcc-HH-----HHhhcCee
Q 003909 665 L-----FTRVEP--SHKRMLVEALQN-------QNEVVAMTGDGVNDAPALKKADIGIAMGSGT-AV-----AKSASDMV 724 (787)
Q Consensus 665 v-----~~~~~p--~~K~~~v~~l~~-------~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~-~~-----~~~~ad~v 724 (787)
+ +.+..| ..|...++.+.+ ..+.|++|||+.||++||+.||+||||+|+. +. .+..+|++
T Consensus 172 ~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~ 251 (271)
T PRK03669 172 FVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYR 251 (271)
T ss_pred EEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEe
Confidence 0 112222 256665555543 4567999999999999999999999999655 32 45589999
Q ss_pred ccCCCchHHHHHHHH
Q 003909 725 LADDNFATIVAAVAE 739 (787)
Q Consensus 725 ~~~~~~~~i~~~i~~ 739 (787)
+...+.+|+.+++++
T Consensus 252 ~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 252 TQREGPEGWREGLDH 266 (271)
T ss_pred ccCCCcHHHHHHHHH
Confidence 999999999999864
No 52
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.33 E-value=5.5e-12 Score=129.47 Aligned_cols=147 Identities=22% Similarity=0.314 Sum_probs=103.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc-c--h---------------------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT-A--S--------------------- 646 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~-~--~--------------------- 646 (787)
.++.+++.++|++|+++|++++++|||+...+..+.+++|+..+.+..+|..+. . .
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999987554432221100 0 0
Q ss_pred -----------------h----h--------------ccC---------------ChH---HHHHhhc------cceE--
Q 003909 647 -----------------E----F--------------EEL---------------PAM---QQTVALQ------HMAL-- 665 (787)
Q Consensus 647 -----------------~----~--------------~~~---------------~~~---~~~~~~~------~~~v-- 665 (787)
. . ... ... .....+. ...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 0 0 000 000 0000010 0001
Q ss_pred ----EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 666 ----FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 666 ----~~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
+.+..| ..|...++.+.+. .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+++.+++.+||++
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhh
Confidence 112222 2577777776653 357899999999999999999999999999999999999999999999987
Q ss_pred HH
Q 003909 736 AV 737 (787)
Q Consensus 736 ~i 737 (787)
+|
T Consensus 255 ~l 256 (256)
T TIGR00099 255 AL 256 (256)
T ss_pred hC
Confidence 53
No 53
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.28 E-value=1.8e-11 Score=127.44 Aligned_cols=129 Identities=17% Similarity=0.282 Sum_probs=100.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---cccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.+.++.|++.|++++++||.....+..+.+++|++....+ ..+..+++..... -
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~-----------------i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD-----------------I 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc-----------------c
Confidence 5899999999999999999999999999889999999999653211 0011111110000 0
Q ss_pred cChhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 669 VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
...+.|.+.++.+.++ .+.++++|||.||++|++.||+|||| |+.+.+++.||+++..++++++..++-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2235677777776543 46899999999999999999999999 999999999999999999999988764
No 54
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.27 E-value=2.3e-11 Score=114.07 Aligned_cols=106 Identities=16% Similarity=0.226 Sum_probs=88.0
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe--cChhhHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR--VEPSHKRM 676 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K~~ 676 (787)
.+|+.|+++|+++.++|+.+...++...+.+|+... |.. -.|+.-..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~-------------------------------f~~~kpkp~~~~~ 89 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF-------------------------------HEGIKKKTEPYAQ 89 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE-------------------------------EecCCCCHHHHHH
Confidence 689999999999999999999999999999999752 211 22444455
Q ss_pred HHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 677 LVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 677 ~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
+++.+.-..+.+++|||+.||++|++.|++++||+|+.+.+++.|++|+.+++.+|++.
T Consensus 90 ~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~ 148 (169)
T TIGR02726 90 MLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVR 148 (169)
T ss_pred HHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHH
Confidence 55555545678999999999999999999999999999999999999998777766543
No 55
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.22 E-value=9.6e-11 Score=121.18 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=103.8
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc-hh----------------hc--c
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA-SE----------------FE--E 650 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~-~~----------------~~--~ 650 (787)
++.+.++++++|++|+++|++++++|||+...+..+++++|+..+.++.+|..+.. .. +. .
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELG 98 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcC
Confidence 34678899999999999999999999999999999999999986655544432210 00 00 0
Q ss_pred CChHHH-------------------------------------HHh----hc----------------------cce---
Q 003909 651 LPAMQQ-------------------------------------TVA----LQ----------------------HMA--- 664 (787)
Q Consensus 651 ~~~~~~-------------------------------------~~~----~~----------------------~~~--- 664 (787)
+..+.. ... +. ...
T Consensus 99 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (273)
T PRK00192 99 PPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTR 178 (273)
T ss_pred CCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEE
Confidence 000000 000 00 000
Q ss_pred --EEEecCh-hhHHHHHHHHhh----CC-CEEEEEcCCccCHHHHhhCCceEecCCccHHHH----hhc-Ceec--cCCC
Q 003909 665 --LFTRVEP-SHKRMLVEALQN----QN-EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK----SAS-DMVL--ADDN 729 (787)
Q Consensus 665 --v~~~~~p-~~K~~~v~~l~~----~~-~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~----~~a-d~v~--~~~~ 729 (787)
-+....| ..|...++.+.+ .. +.|++|||+.||++|++.||+|+||+||.+.+| .+| +.++ .+++
T Consensus 179 ~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 179 GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCC
Confidence 0111111 156666655543 35 899999999999999999999999999999999 776 7887 6788
Q ss_pred chHHHHHHHH
Q 003909 730 FATIVAAVAE 739 (787)
Q Consensus 730 ~~~i~~~i~~ 739 (787)
.+|+++.+++
T Consensus 259 ~~Gv~~~l~~ 268 (273)
T PRK00192 259 PEGWAEAINK 268 (273)
T ss_pred cHHHHHHHHH
Confidence 9999999863
No 56
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.19 E-value=1e-10 Score=113.96 Aligned_cols=127 Identities=15% Similarity=0.108 Sum_probs=101.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---ccc-ccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVG-RSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
++.|++.+.|+.+++.| +++++||.....+..+++++|++....+ ..+ ..++|. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~------------------~-- 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGY------------------Q-- 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECe------------------e--
Confidence 58999999999999985 9999999999999999999999753321 000 111111 0
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHH
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~g 740 (787)
...+..|...++.++..+..++++|||.||++|++.||+||++ ++.+.++++||-...-.+.+.+...+.++
T Consensus 127 ~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~-~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 127 LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEe-cCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 0346789999999988887899999999999999999999999 67788888887777666788888888765
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.19 E-value=8.8e-11 Score=109.57 Aligned_cols=110 Identities=19% Similarity=0.263 Sum_probs=86.5
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHH
Q 003909 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVE 679 (787)
Q Consensus 600 ~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 679 (787)
+|++|+++|++++++||++...+..+++++|+...... ....|+-..++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~-----------------------------~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG-----------------------------QSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-----------------------------ccchHHHHHHHHH
Confidence 89999999999999999999999999999998753200 0011222233333
Q ss_pred HHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchH-HHHHHH
Q 003909 680 ALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT-IVAAVA 738 (787)
Q Consensus 680 ~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~-i~~~i~ 738 (787)
.+.-..+.++++||+.||++|++.|+++++|.++.+.++..|++++.++..+| ++++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 33334568999999999999999999999999999999999999998776555 777664
No 58
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.11 E-value=2.1e-10 Score=89.30 Aligned_cols=61 Identities=36% Similarity=0.518 Sum_probs=56.8
Q ss_pred HhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 003909 15 FFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFL 75 (787)
Q Consensus 15 ~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (787)
.|++|+..||+++|+.+|+++||+|+++.++.+++|+.++++|++++.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4788988999999999999999999999988889999999999999999999999988765
No 59
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.09 E-value=5.8e-10 Score=112.81 Aligned_cols=142 Identities=17% Similarity=0.235 Sum_probs=96.5
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC--ccccccccc-cch------h----h-------------cc
Q 003909 597 VKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH--LVDFVGRSY-TAS------E----F-------------EE 650 (787)
Q Consensus 597 ~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~-~~~------~----~-------------~~ 650 (787)
..++++ ++++|++++++|||+...+..+.+++++..+ .+..+|..+ ... . . ..
T Consensus 20 ~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (236)
T TIGR02471 20 FVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD 98 (236)
T ss_pred HHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc
Confidence 336676 6999999999999999999999999998643 343333221 100 0 0 00
Q ss_pred CC--------------------h---H---HHHHhhc----cce-EEE-----ecCh--hhHHHHHHHHhhC----CCEE
Q 003909 651 LP--------------------A---M---QQTVALQ----HMA-LFT-----RVEP--SHKRMLVEALQNQ----NEVV 688 (787)
Q Consensus 651 ~~--------------------~---~---~~~~~~~----~~~-v~~-----~~~p--~~K~~~v~~l~~~----~~~v 688 (787)
+. . . .....+. ... +++ ...| ..|...++.+.++ ...+
T Consensus 99 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~ 178 (236)
T TIGR02471 99 IPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQI 178 (236)
T ss_pred CCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 00 0 0 0000000 000 111 2222 2677777776543 2368
Q ss_pred EEEcCCccCHHHHhhCCceEecCCccHHHHhhcC----eeccCCCchHHHHHHHH
Q 003909 689 AMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD----MVLADDNFATIVAAVAE 739 (787)
Q Consensus 689 ~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad----~v~~~~~~~~i~~~i~~ 739 (787)
+++||+.||++||+.+++||+|+|+.+.+|+.|| +|+.+++.+|++++|++
T Consensus 179 i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 179 LVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred EEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 8899999999999999999999999999999999 88989999999999864
No 60
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.09 E-value=3.1e-10 Score=111.13 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=92.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc---ccccccchhhccCChHHHHHhhccceEEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
.++.|++.+.++.++++|++++++||-...-+.++|+++|++....+. .+..++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 579999999999999999999999999999999999999998754321 01123332 222
Q ss_pred -ecChhhHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCC
Q 003909 668 -RVEPSHKRMLVEALQNQ-N---EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADD 728 (787)
Q Consensus 668 -~~~p~~K~~~v~~l~~~-~---~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~ 728 (787)
.+..+.|...++.+.+. | +.+.++|||.||+|||+.||.++++ |+.+.++..|+......
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~-n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV-NPKPKLRALADVRIWPI 202 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe-CcCHHHHHHHHHhcChh
Confidence 24457888888666543 3 3588889999999999999999999 66777888887766543
No 61
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.09 E-value=2.8e-10 Score=99.92 Aligned_cols=113 Identities=20% Similarity=0.343 Sum_probs=90.5
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 678 (787)
..|+.|.+.|+++.++|||....++.-|+++||... |. --.+|....
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~-------------------------------~q--G~~dK~~a~ 88 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL-------------------------------YQ--GISDKLAAF 88 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee-------------------------------ee--chHhHHHHH
Confidence 578999999999999999999999999999999762 22 245676666
Q ss_pred HHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCch----HHHHHHHHHHHHH
Q 003909 679 EALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA----TIVAAVAEGRAIY 744 (787)
Q Consensus 679 ~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~----~i~~~i~~gR~~~ 744 (787)
+.+... .+.|+++||..||+|+|+..|+++|+.++.+.+++.||+|+..+.-. .+.++|..++..+
T Consensus 89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 89 EELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 555443 56899999999999999999999999999999999999999755433 2344454444443
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.95 E-value=3.2e-09 Score=102.26 Aligned_cols=103 Identities=22% Similarity=0.296 Sum_probs=82.3
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 678 (787)
.+|+.|+++|++++++||++...+..+++++|+... |. ..+.|...+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------f~--g~~~k~~~l 101 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------YQ--GQSNKLIAF 101 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-------------------------------ec--CCCcHHHHH
Confidence 689999999999999999999999999999998752 21 122344444
Q ss_pred HHH----hhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHH
Q 003909 679 EAL----QNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734 (787)
Q Consensus 679 ~~l----~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~ 734 (787)
+.+ .-..+.+++|||+.||++|++.||++++++++.+..+..||+++..+.-+|..
T Consensus 102 ~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~ 161 (183)
T PRK09484 102 SDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAV 161 (183)
T ss_pred HHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHH
Confidence 333 33346899999999999999999999999998899999999999765544543
No 63
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.91 E-value=8.5e-09 Score=105.12 Aligned_cols=150 Identities=17% Similarity=0.176 Sum_probs=103.4
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC--ccccccccc-cchh-------------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH--LVDFVGRSY-TASE------------------- 647 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~-~~~~------------------- 647 (787)
..+..|...+++++++++|+.++++|||+...++.+.+++++..+ .+..+|..+ .+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456889999999999999999999999999999999999998765 333222211 1100
Q ss_pred -------hccC-----------------ChHH----H---HHhhc----cceE-EE-----ecCh--hhHHHHHHHHhhC
Q 003909 648 -------FEEL-----------------PAMQ----Q---TVALQ----HMAL-FT-----RVEP--SHKRMLVEALQNQ 684 (787)
Q Consensus 648 -------~~~~-----------------~~~~----~---~~~~~----~~~v-~~-----~~~p--~~K~~~v~~l~~~ 684 (787)
+..+ .... . ...+. ...+ ++ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 0000 0 00000 0111 11 2222 3677777777553
Q ss_pred ----CCEEEEEcCCccCHHHHhh-CCceEecCCccHHHHhhcC-------eeccCCCchHHHHHHHH
Q 003909 685 ----NEVVAMTGDGVNDAPALKK-ADIGIAMGSGTAVAKSASD-------MVLADDNFATIVAAVAE 739 (787)
Q Consensus 685 ----~~~v~~vGDg~ND~~ml~~-A~vgia~~~~~~~~~~~ad-------~v~~~~~~~~i~~~i~~ 739 (787)
...|+++||+.||++|++. ++.||+|+|+.+.+|+.++ +++.....+|+++++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 4678999999999999998 6799999999999998654 77888888999998864
No 64
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.88 E-value=8.2e-09 Score=103.28 Aligned_cols=126 Identities=22% Similarity=0.302 Sum_probs=92.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc---ccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.+.++.|+++|++++++||.....+..+.+.+|+.....+. .+..+.+. +...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~------------------~~~~ 146 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGL------------------VEGP 146 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEE------------------ecCc
Confidence 58999999999999999999999999999999999999997632110 00000000 0000
Q ss_pred -cChhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHH
Q 003909 669 -VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 669 -~~p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
..+..|..+++.+.+. .+.++++||+.+|++|++.||+++++ ++.+.++++||+++.+.++..+..+
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCCHHHHHhchhccCCCCHHHHHhh
Confidence 1122355555544332 35688899999999999999999999 5678899999999998887766544
No 65
>PLN02382 probable sucrose-phosphatase
Probab=98.80 E-value=2.7e-08 Score=107.91 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=97.1
Q ss_pred CCChhHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCc--cccccc-cccchh--------------------
Q 003909 592 PPREEVKNAM-LSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL--VDFVGR-SYTASE-------------------- 647 (787)
Q Consensus 592 ~~~~~~~~~i-~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~--~~~~~~-~~~~~~-------------------- 647 (787)
.+.+....++ ++++++|+.++++|||++..+..+.+++++..+. +..+|. ++.+..
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 4555556666 8899999999999999999999999999987662 211111 100000
Q ss_pred ---hccC--------------------ChH---H----HHHhhc----cce------EEEecCh--hhHHHHHHHHhhC-
Q 003909 648 ---FEEL--------------------PAM---Q----QTVALQ----HMA------LFTRVEP--SHKRMLVEALQNQ- 684 (787)
Q Consensus 648 ---~~~~--------------------~~~---~----~~~~~~----~~~------v~~~~~p--~~K~~~v~~l~~~- 684 (787)
...+ ... . +...+. ... -+....| ..|...++.+.+.
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 0000 000 0 001110 011 1223333 3588888777544
Q ss_pred ------CCEEEEEcCCccCHHHHhhCC-ceEecCCccHHHHhhc--------Ceec-cCCCchHHHHHHHH
Q 003909 685 ------NEVVAMTGDGVNDAPALKKAD-IGIAMGSGTAVAKSAS--------DMVL-ADDNFATIVAAVAE 739 (787)
Q Consensus 685 ------~~~v~~vGDg~ND~~ml~~A~-vgia~~~~~~~~~~~a--------d~v~-~~~~~~~i~~~i~~ 739 (787)
.+.++++||+.||++||+.|+ .||||+|+.+.+|+.+ ++++ .+++.+||.+++++
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 357899999999999999999 7999999999999854 4442 46678999999864
No 66
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.74 E-value=4.9e-08 Score=97.26 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=43.8
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~ 640 (787)
.+...++++++|++|+++|++++++|||++..+..+.+++|+..+.+..+|
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NG 63 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENG 63 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCC
Confidence 456677899999999999999999999999999999999998765554433
No 67
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.66 E-value=2.1e-07 Score=93.13 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=41.2
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC-CCcccccc
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVG 640 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~-~~~~~~~~ 640 (787)
..+.++++|++|+++|++++++|||+...+..+++.+|+. .+.++.+|
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 4555999999999999999999999999999999999987 45554444
No 68
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.64 E-value=1.7e-07 Score=92.61 Aligned_cols=125 Identities=18% Similarity=0.220 Sum_probs=88.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE--ec
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT--RV 669 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~ 669 (787)
++.|++.+.++.|+++ ++++++|+.....+..+.+++|+....... ....... .+.. ..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~--~~~~~~~----------------~i~~~~~~ 128 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHS--LEVDEDG----------------MITGYDLR 128 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcce--EEECCCC----------------eEECcccc
Confidence 4689999999999999 999999999999999999999987532110 0000000 0000 02
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe-eccCCCchHHHHHH
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM-VLADDNFATIVAAV 737 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~-v~~~~~~~~i~~~i 737 (787)
.|..|...++.++..++.+++||||.||++|.+.||+|++.+.........+++ ++. ++..+...+
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCcccccC--CHHHHHHHH
Confidence 367788888888888889999999999999999999999986544444445565 332 355554444
No 69
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.59 E-value=8.5e-08 Score=87.48 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=77.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-------cchhhccCChHHHHHhhccce
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-------TASEFEELPAMQQTVALQHMA 664 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 664 (787)
.+.|++++.++.|+++|.+++++||.-...+.++|.++||+...+..+...+ ..++....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt------------- 154 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPT------------- 154 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCcc-------------
Confidence 4789999999999999999999999999999999999999874332111111 11111111
Q ss_pred EEEecChhhHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 665 LFTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 665 v~~~~~p~~K~~~v~~l~~~--~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
.....|.+.+..+++. -..++|||||.||++|+..|+.=++.+
T Consensus 155 ----sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 ----SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ----ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 2234788888888764 458899999999999999987777765
No 70
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.59 E-value=2.3e-07 Score=91.47 Aligned_cols=117 Identities=21% Similarity=0.208 Sum_probs=80.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|++++++|+.....+..+++.+|+...... .....+ ..... ...+....+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~---~~~~~~-~g~~~----------p~~~~~~~~ 145 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN---ELVFDE-KGFIQ----------PDGIVRVTF 145 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE---EEEEcC-CCeEe----------cceeeEEcc
Confidence 5899999999999999999999999999999999999998643211 000000 00000 001111334
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC
Q 003909 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (787)
Q Consensus 672 ~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad 722 (787)
..|...++.+.+. .+.++++||+.||++|++.||++++++......+.++|
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 5566666555332 45689999999999999999999999755544554444
No 71
>PTZ00174 phosphomannomutase; Provisional
Probab=98.49 E-value=6.5e-07 Score=90.98 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CccCHHHHhhC-CceEecCCccHHHHhhcCeec
Q 003909 672 SHKRMLVEALQNQNEVVAMTGD----GVNDAPALKKA-DIGIAMGSGTAVAKSASDMVL 725 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGD----g~ND~~ml~~A-~vgia~~~~~~~~~~~ad~v~ 725 (787)
-.|...++.+.+..+.|++||| |.||++||+.| -.|++++|+.+.+|..+.++.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 3688888888777789999999 99999999976 467777799999999876654
No 72
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.45 E-value=1.4e-06 Score=87.22 Aligned_cols=51 Identities=10% Similarity=0.135 Sum_probs=44.8
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~ 640 (787)
++...+.++++|++|+++||.|+++|||....+..+.+++|+..+.+..+|
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNG 66 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDG 66 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCC
Confidence 445788899999999999999999999999999999999999876655444
No 73
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.40 E-value=1.9e-06 Score=96.09 Aligned_cols=46 Identities=7% Similarity=0.113 Sum_probs=40.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD 637 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~ 637 (787)
...+.++++|++|+++|+.++++|||+...+..+++++|+..+.+.
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~ 478 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFIT 478 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEE
Confidence 3667899999999999999999999999999999999998654443
No 74
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.38 E-value=2.1e-06 Score=87.86 Aligned_cols=139 Identities=13% Similarity=0.237 Sum_probs=88.1
Q ss_pred CCChhHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---ch-hhccCC--------------
Q 003909 592 PPREEVKNAMLSCMT-AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---AS-EFEELP-------------- 652 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~-~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~-~~~~~~-------------- 652 (787)
.+.++++++|++|++ .|++++++|||+...+..+++.+++. ....+|..+. +. ....+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~--~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFP--LAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccce--EEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 678999999999998 79999999999999999988777642 1111111000 00 000000
Q ss_pred --------------------------hHHHHH---hhc----cce-----EEEecCh--hhHHHHHHHHhhC----CCEE
Q 003909 653 --------------------------AMQQTV---ALQ----HMA-----LFTRVEP--SHKRMLVEALQNQ----NEVV 688 (787)
Q Consensus 653 --------------------------~~~~~~---~~~----~~~-----v~~~~~p--~~K~~~v~~l~~~----~~~v 688 (787)
.+.... .+. ... -+.+..| ..|...++.+.+. ...+
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 000000 000 000 1122223 3677777766543 3578
Q ss_pred EEEcCCccCHHHHhhC----CceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 689 AMTGDGVNDAPALKKA----DIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 689 ~~vGDg~ND~~ml~~A----~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+++||+.||.+||+.+ ++||+||++.+ .|++.+. +.+.|..++.
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCC--CHHHHHHHHH
Confidence 9999999999999999 99999998753 4677775 4777777764
No 75
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.37 E-value=3.4e-06 Score=83.83 Aligned_cols=111 Identities=18% Similarity=0.141 Sum_probs=77.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE---E
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF---T 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~ 667 (787)
-+++|++.+.++.|++.|++++++||.....+..+.+.++...... .+...+.+..+...... ...+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~-~n~~~~~~~~~~~~~p~--------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIY-CNEADFSNEYIHIDWPH--------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEE-eceeEeeCCeeEEeCCC--------CCcccccc
Confidence 4689999999999999999999999999999999998875433211 11111122111100000 0000 0
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
.+ ...|..+++.++...+.++++|||.||++|++.||+.+|-+
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 11 24688999988877888999999999999999999988765
No 76
>PLN02954 phosphoserine phosphatase
Probab=98.35 E-value=3.8e-06 Score=84.30 Aligned_cols=126 Identities=17% Similarity=0.258 Sum_probs=81.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC-cccc----c-cccccchhhccCChHHHHHhhccceE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH-LVDF----V-GRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~-~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
++.|++.+.++.|+++|++++++||.....+..+++.+|+... .... . ...+.+..... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~--------------~ 149 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENE--------------P 149 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCC--------------c
Confidence 4789999999999999999999999999999999999999731 1100 0 00000000000 0
Q ss_pred EEecChhhHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhC--CceEecCCc--cHHHHhhcCeeccCCCchHHHH
Q 003909 666 FTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKA--DIGIAMGSG--TAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~~--~~~v~~vGDg~ND~~ml~~A--~vgia~~~~--~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
......|.+.++.+... .+.++++||+.||+.|.+.+ +++++.+.. .+.....+|+++.+ +..+..
T Consensus 150 --~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 150 --TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred --ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 01123466666665543 35788999999999998884 444555422 24445568998854 444443
No 77
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.26 E-value=5.3e-06 Score=82.73 Aligned_cols=126 Identities=22% Similarity=0.320 Sum_probs=91.9
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEec
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 669 (787)
...+-|++++++..|+++|++..++|+++...+..+.+.+|+..+.... +.++.... ..-
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i----~g~~~~~~----------------~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVI----VGGDDVPP----------------PKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceE----EcCCCCCC----------------CCc
Confidence 4568899999999999999999999999999999999999998765221 11111100 013
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC---ceEecCC--ccHHHHhhcCeeccCCCchHHHHHH
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD---IGIAMGS--GTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~---vgia~~~--~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
.|.....+++.+....+.++||||+.+|+.|-+.|| +||..|. ........+|+++.+ +..+...+
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 455566666766666558999999999999999999 5666663 344555568998865 55555444
No 78
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.26 E-value=3.8e-06 Score=82.81 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=76.9
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---c-ccccccchhhccCChHHHHHhhccceE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
..++.|++.+.++.++++|++++++||.....+..+++.+|++..... . .+..++|....
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~---------------- 148 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDG---------------- 148 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccC----------------
Confidence 346899999999999999999999999999999999999999753211 0 01111111000
Q ss_pred EEecChhhHHHHHHHHhh-C---CCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 666 FTRVEPSHKRMLVEALQN-Q---NEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~-~---~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
-.+.++.|...++.+.. . .+.++++||+.+|++|++.||.++++.
T Consensus 149 -~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 149 -NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 01334677777765543 2 336888999999999999999999986
No 79
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.26 E-value=5.2e-06 Score=82.82 Aligned_cols=109 Identities=17% Similarity=0.140 Sum_probs=74.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceE--E-Ee
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL--F-TR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~-~~ 668 (787)
+++|++.+.++.|+++|+++.++||.....+..+.+++ +.......+...+.+.....-... ... + ..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~--------p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH--------PCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC--------Ccccccccc
Confidence 68999999999999999999999999999999999988 643211111111122111000000 000 0 00
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~ 710 (787)
+ ...|..+++.++.....++++|||.||++|.+.||+.++-
T Consensus 145 ~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 145 C-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred C-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 1 1247888888887777899999999999999999997773
No 80
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.25 E-value=2.6e-06 Score=83.22 Aligned_cols=92 Identities=23% Similarity=0.311 Sum_probs=68.6
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChh--
Q 003909 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS-- 672 (787)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-- 672 (787)
+++.+.|+.++++|++++|+||.....+.++++.+|++...+..... .... ......+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~---------------~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNG---------------GGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTT---------------CCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecc---------------cceeeeeECCCCC
Confidence 88889999999999999999999999999999999998632111111 0000 01123333333
Q ss_pred -hHHHHHHHH------hhCCCEEEEEcCCccCHHHHh
Q 003909 673 -HKRMLVEAL------QNQNEVVAMTGDGVNDAPALK 702 (787)
Q Consensus 673 -~K~~~v~~l------~~~~~~v~~vGDg~ND~~ml~ 702 (787)
.|...++.+ +.....++++|||.||++|||
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 455789999999999999996
No 81
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.23 E-value=7.8e-06 Score=82.16 Aligned_cols=127 Identities=21% Similarity=0.292 Sum_probs=88.9
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.++++.|++.|++++++||........+.+.+|+..... .++........ ...
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDSLPNK----------------KPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCCCCCC----------------CcC
Confidence 4688999999999999999999999999999999999999865421 11111111000 012
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCC----ccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS----GTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~----~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
|+--..+++.++...+.++++||+.+|+.|.+.||+ +|.+.. ..+.....+++++ +++..+..++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 333345556666667789999999999999999999 555532 2334445688887 457777776654
No 82
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.17 E-value=3.7e-06 Score=80.96 Aligned_cols=97 Identities=24% Similarity=0.291 Sum_probs=69.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---c-ccccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
+++|++.+.++.++++|++++++||.....+..+++.+|+.....+ . .+..+.+..... .
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~----------------~ 136 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQ----------------V 136 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCc----------------c
Confidence 3679999999999999999999999999999999999998743211 0 000111110000 0
Q ss_pred ecChhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhC
Q 003909 668 RVEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A 704 (787)
...+..|...++.+... .+.++++|||.||++|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 13456788888776543 45789999999999999876
No 83
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.14 E-value=7.5e-06 Score=79.63 Aligned_cols=114 Identities=20% Similarity=0.213 Sum_probs=75.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE-ec
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT-RV 669 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~ 669 (787)
-++.|++.+.++.|++.|++++++|+.....+..+.+..|+...... ++..+....-. ............+. ..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----i~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE----IYSNPASFDND-GRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE----EeccCceECCC-CcEEEecCCCCccCcCC
Confidence 36889999999999999999999999999999999999998653211 11111000000 00000000000000 01
Q ss_pred ChhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEe
Q 003909 670 EPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
....|..+++.++.. .+.++++|||.||+.|.+.||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123588899988877 8889999999999999999987654
No 84
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.12 E-value=1.3e-05 Score=79.21 Aligned_cols=123 Identities=18% Similarity=0.240 Sum_probs=84.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.+++|+++|++++++|+.....+....+.+|+...... ++..++.. ..+-.|
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~----i~~~~~~~----------------~~KP~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH----VIGSDEVP----------------RPKPAP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee----EEecCcCC----------------CCCCCh
Confidence 6889999999999999999999999999999999999998653211 11111000 001223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-c--C--CccHHHHhhcCeeccCCCchHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--G--SGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~--~--~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
+--..+++.++-..+.+++|||+.+|+.+-+.||+... + | +..+..+..+|+++.+ +..+..+
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~ 202 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLAL 202 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHH
Confidence 33344555555556789999999999999999999643 3 2 2233445678888744 5455443
No 85
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.09 E-value=1.1e-05 Score=73.58 Aligned_cols=118 Identities=19% Similarity=0.111 Sum_probs=74.7
Q ss_pred ccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 588 GMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 588 ~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
....++.+++.+.+++|+++|++++++||+....+...++.+|+...... ++......................+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP----VITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh----eeccchhhhhcccccccccccccccC
Confidence 34458999999999999999999999999999999999999998432110 11000000000000000000111222
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEe
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIA 709 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia 709 (787)
+..+..+..+.+.+....+.++++||+.+|+.|++.+++ +|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 344555566666665556789999999999999999543 444
No 86
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.01 E-value=2.5e-05 Score=77.05 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=36.9
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG 630 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~g 630 (787)
.++.+++.++|++|+++|++++++|||....+..+.+.++
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 16 HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 3588999999999999999999999999999999998854
No 87
>PRK11590 hypothetical protein; Provisional
Probab=97.95 E-value=4.7e-05 Score=75.38 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=75.8
Q ss_pred CCChhHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC--CccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAM-LSCMTAGIRVIVVTGDNKSTAESICHKIGAFD--HLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i-~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
.+.|++.+.| +.+++.|++++++|+.+...+..+++.+|+.. ..+ +.+++.. ......-..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i--------~t~l~~~--------~tg~~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI--------ASQMQRR--------YGGWVLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE--------EEEEEEE--------EccEECCcc
Confidence 4589999999 57888999999999999999999999999621 111 1111000 000000112
Q ss_pred cChhhHHHHHHHH-hhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHH
Q 003909 669 VEPSHKRMLVEAL-QNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK 718 (787)
Q Consensus 669 ~~p~~K~~~v~~l-~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~ 718 (787)
|..++|...++.. ........+-||+.||+|||+.|+.+++++ .++..+
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn-p~~~l~ 208 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT-PRGELQ 208 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC-ccHHhh
Confidence 6668898877654 334445567799999999999999999994 444443
No 88
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.94 E-value=3e-05 Score=78.49 Aligned_cols=68 Identities=21% Similarity=0.271 Sum_probs=48.7
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHH-----HHhhcC----eeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAV-----AKSASD----MVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~-----~~~~ad----~v~~~~~~~~i~~~i~ 738 (787)
..|...++.++.. .+.|+++||+.||.+||..++.||.++|+.++ ..+..+ |....+.-.||.+.++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4788888888765 34677789999999999999999999999988 332222 4556667788888875
Q ss_pred H
Q 003909 739 E 739 (787)
Q Consensus 739 ~ 739 (787)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 4
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.92 E-value=3.8e-05 Score=76.35 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=78.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|++++++|+.+...+..+.+.+|+..... .++..+.... ....|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~Kp~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----VLIGGDSLAQ----------------RKPHP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc----EEEecCCCCC----------------CCCCh
Confidence 588999999999999999999999999999999999999865421 1111111000 01123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-c--CC-c-cHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GS-G-TAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~--~~-~-~~~~~~~ad~v~~~ 727 (787)
+-=..+++.+....+.+++|||+.+|+.+.+.||+... + |. . .+.....+|+++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~ 205 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS 205 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC
Confidence 32344455555556779999999999999999999654 4 21 1 12223457887743
No 90
>PRK08238 hypothetical protein; Validated
Probab=97.92 E-value=8.2e-05 Score=82.10 Aligned_cols=98 Identities=19% Similarity=0.340 Sum_probs=73.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
+++|++.+.+++++++|++++++|+.+...+..+++.+|+.+.. +..+.. .++.|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~V-------igsd~~------------------~~~kg 126 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGV-------FASDGT------------------TNLKG 126 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEE-------EeCCCc------------------cccCC
Confidence 47899999999999999999999999999999999999983321 111100 12445
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTA 715 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~ 715 (787)
+.|.+.+...... +.+.++||+.+|++|++.|+-.++++.+..
T Consensus 127 ~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 127 AAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred chHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 6666655433222 225677999999999999999999975443
No 91
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.91 E-value=5.3e-05 Score=78.11 Aligned_cols=126 Identities=12% Similarity=0.207 Sum_probs=84.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.++|+.|+++|++++++|+.+...+..+.++.|+..... .++.++.... ....
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~----~i~~~d~~~~----------------~Kp~ 159 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR----WIIGGDTLPQ----------------KKPD 159 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----EEEecCCCCC----------------CCCC
Confidence 4678999999999999999999999999999999999988865321 1111111000 0011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCC----ccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS----GTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~----~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
|+--..+++.+.-..+.+++|||+.||+.|.+.||+ .+++.. ..+.....+|+++. ++..+.+++.
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 222234445454456789999999999999999998 344432 22233457888884 4666665543
No 92
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.91 E-value=5.7e-05 Score=75.16 Aligned_cols=124 Identities=21% Similarity=0.222 Sum_probs=83.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+..+.. .++..+.... ....|
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~----------------~Kp~p 141 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD----VVITLDDVEH----------------AKPDP 141 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee----EEEecCcCCC----------------CCCCc
Confidence 478999999999999999999999999999999999999876431 1111111100 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ec--CC-ccHHH-HhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AM--GS-GTAVA-KSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~--~~-~~~~~-~~~ad~v~~~~~~~~i~~~i 737 (787)
+--..+++.+......+++|||+.+|+.+-+.||+-. ++ +. ..+.. ...+|+++. ++..+..++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 142 EPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 3334555555555678899999999999999999943 23 31 22223 345788765 366665554
No 93
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.88 E-value=8.3e-05 Score=73.19 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=74.9
Q ss_pred CCChhHHHHHH-HHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAML-SCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~-~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+.|++.+.|+ .++++|++++++|+-+...+..+++..++.... .++ +.+++.... ....=..|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-----~~i-~t~le~~~g--------g~~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-----NLI-ASQIERGNG--------GWVLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-----cEE-EEEeEEeCC--------ceEcCccCC
Confidence 47899999996 788899999999999999999999986653211 001 111110000 000011256
Q ss_pred hhhHHHHHHHHh-hCCCEEEEEcCCccCHHHHhhCCceEecCCccHHH
Q 003909 671 PSHKRMLVEALQ-NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVA 717 (787)
Q Consensus 671 p~~K~~~v~~l~-~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~ 717 (787)
.++|...++..- .......+-||+.||.|||+.||.+++++ .++..
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn-p~~~L 206 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS-KRGEL 206 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC-cchHh
Confidence 688988776543 23345567799999999999999999994 44443
No 94
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.82 E-value=6.7e-05 Score=75.11 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=78.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++.|++.++++.|+++|++++++|+.....+..+.+++|+...... ++..+... .....
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----~~~~~~~~----------------~~Kp~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA----LASAEKLP----------------YSKPH 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE----EEEcccCC----------------CCCCC
Confidence 46789999999999999999999999999999999999998765311 11111110 00122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec-CCc---cHHHHhhcCeeccC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-GSG---TAVAKSASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~-~~~---~~~~~~~ad~v~~~ 727 (787)
|+-=..+.+.+.-..+.+++|||+.||+.+.+.||+.... ..+ .+.....+|+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 3322333444444456799999999999999999986543 222 22223356776643
No 95
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.75 E-value=0.00016 Score=73.64 Aligned_cols=119 Identities=16% Similarity=0.165 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+..+.. .++.+++...- .-.|
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~iv~~~~~~~~----------------KP~p 167 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----AVIIGSECEHA----------------KPHP 167 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc----EEEecCcCCCC----------------CCCh
Confidence 578899999999999999999999999999999999999876431 12222211110 1233
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-cC--CccHHH-HhhcCeeccCCCc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MG--SGTAVA-KSASDMVLADDNF 730 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~~--~~~~~~-~~~ad~v~~~~~~ 730 (787)
+--..+++.+....+.+++|||+.+|+.+-+.||+-.. +. ...+.. ...+|+++.+-..
T Consensus 168 ~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 168 DPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 44455556665566789999999999999999999543 42 222222 3468888865443
No 96
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.73 E-value=0.00031 Score=70.96 Aligned_cols=129 Identities=13% Similarity=0.167 Sum_probs=82.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc--------ccccccchhhccCChHHHHHhhcc
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF--------VGRSYTASEFEELPAMQQTVALQH 662 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 662 (787)
-+++|++.+.++.|+++|+++.++||.....+..+.+++|+....... .+..+.|.. ..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P~----------- 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GPL----------- 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CCc-----------
Confidence 468999999999999999999999999999999999999986433211 111222210 000
Q ss_pred ceEEEecChhhHHHHHH-----HHh--hCCCEEEEEcCCccCHHHHhhC---CceEecC--Cc-----cHHHHhhcCeec
Q 003909 663 MALFTRVEPSHKRMLVE-----ALQ--NQNEVVAMTGDGVNDAPALKKA---DIGIAMG--SG-----TAVAKSASDMVL 725 (787)
Q Consensus 663 ~~v~~~~~p~~K~~~v~-----~l~--~~~~~v~~vGDg~ND~~ml~~A---~vgia~~--~~-----~~~~~~~ad~v~ 725 (787)
.....|.+.+. .+. .....|+++|||.||+.|..-. .--+.+| |. -+.-+++-|+|+
T Consensus 188 ------i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 ------IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred ------ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 11123444332 222 2346788999999999996544 1233333 32 233456789999
Q ss_pred cCCCchHHHHHH
Q 003909 726 ADDNFATIVAAV 737 (787)
Q Consensus 726 ~~~~~~~i~~~i 737 (787)
.++.--.++..|
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 877655565544
No 97
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.69 E-value=0.00022 Score=71.69 Aligned_cols=122 Identities=16% Similarity=0.073 Sum_probs=83.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+..... .++.++.... ..-.|
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~----------------~KP~p 154 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA----VLIGGDTLAE----------------RKPHP 154 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc----EEEecCcCCC----------------CCCCH
Confidence 578999999999999999999999999998888889998865321 1111111000 01234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCCc----c-HHHHhhcCeeccCCCchHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGSG----T-AVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~~----~-~~~~~~ad~v~~~~~~~~i~~ 735 (787)
+--..+++.+.-..+.+++|||+.+|+.|-+.||+.. ++..+ . ......+|+++.+ +..+..
T Consensus 155 ~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~ 222 (229)
T PRK13226 155 LPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWN 222 (229)
T ss_pred HHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHH
Confidence 4445666667666788999999999999999999964 33211 1 2223458888854 444433
No 98
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.67 E-value=0.00026 Score=83.58 Aligned_cols=151 Identities=20% Similarity=0.301 Sum_probs=91.4
Q ss_pred CcEEEEEecc--CCCCChhHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc--chhhccC---
Q 003909 580 DLTFIGLVGM--LDPPREEVKNAMLSCMT-AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT--ASEFEEL--- 651 (787)
Q Consensus 580 ~l~~lG~i~~--~d~~~~~~~~~i~~l~~-~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~--~~~~~~~--- 651 (787)
|++++..-.- ...+.+++.++|++|.+ .|+.|+++|||+..........+++. .+..+|..+. +......
T Consensus 500 DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~--liaenG~~i~~~~~~w~~~~~~ 577 (726)
T PRK14501 500 DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIH--LVAEHGAWSRAPGGEWQLLEPV 577 (726)
T ss_pred CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeE--EEEeCCEEEeCCCCceEECCCc
Confidence 5555543211 12478999999999999 59999999999999998877665531 1111111100 0000000
Q ss_pred --------------------------------------ChH-------HHHHhh----cc--ceE-----EEecCh--hh
Q 003909 652 --------------------------------------PAM-------QQTVAL----QH--MAL-----FTRVEP--SH 673 (787)
Q Consensus 652 --------------------------------------~~~-------~~~~~~----~~--~~v-----~~~~~p--~~ 673 (787)
..+ +....+ .. ..+ +.+..| -+
T Consensus 578 ~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vn 657 (726)
T PRK14501 578 ATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVN 657 (726)
T ss_pred chhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCC
Confidence 000 000000 00 001 112222 36
Q ss_pred HHHHHHHHhhC--CCEEEEEcCCccCHHHHhhC---CceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 674 KRMLVEALQNQ--NEVVAMTGDGVNDAPALKKA---DIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 674 K~~~v~~l~~~--~~~v~~vGDg~ND~~ml~~A---~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
|...++.+.+. ...++++||+.||.+||+.+ +++|+||++ +.+|++.+.++ +.|..+++
T Consensus 658 KG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 658 KGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 77777777653 35899999999999999986 689999875 46789999764 55777664
No 99
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.67 E-value=0.00034 Score=71.87 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+..+... ++.++... ..|
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~----vi~~~~~~-------------------~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV----VQAGTPIL-------------------SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE----EEecCCCC-------------------CCH
Confidence 5789999999999999999999999999999999999998764311 11111000 012
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-cCC---ccHHH-HhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGS---GTAVA-KSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~~~---~~~~~-~~~ad~v~~~~~~~~i~~~i 737 (787)
+.-..+++.+....+.+++|||+.+|+.+-+.||+-.. +.. ..+.. ...+|+++.+ +..+..++
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 21223333444445679999999999999999999543 322 22223 3458988744 66665544
No 100
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.65 E-value=0.00031 Score=71.89 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=69.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+..... ..++..++... ..-.|
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~~~~----------------~KP~p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDDVPA----------------GRPAP 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEccccCCC----------------CCCCH
Confidence 467899999999999999999999999999999999999876421 11122211110 01223
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceE
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
+-=...++.+.-. .+.+++|||+.+|+.+-+.||+..
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 3334455555542 567999999999999999999843
No 101
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.63 E-value=0.00023 Score=72.55 Aligned_cols=116 Identities=15% Similarity=0.120 Sum_probs=80.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+..+.. .++.+.+... ..-.|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~ii~~~d~~~----------------~KP~P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS----VVLAAEDVYR----------------GKPDP 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc----EEEecccCCC----------------CCCCH
Confidence 568999999999999999999999999999999999999876431 1222221110 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecC-CccHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMG-SGTAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~-~~~~~~~~~ad~v~~~ 727 (787)
+-=...++.+.-..+.+++|||+.+|+.+-+.||+-. ++. .........+|+++.+
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 3334555666656678999999999999999999943 443 2223233357887654
No 102
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.61 E-value=0.00029 Score=70.38 Aligned_cols=98 Identities=28% Similarity=0.282 Sum_probs=70.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC--CCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF--DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
.++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. ... ..++...+... .+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f----~~i~~~~~~~~----------------~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV----DAVVCPSDVAA----------------GR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC----CEEEcCCcCCC----------------CC
Confidence 378999999999999999999999999999999999999987 432 11122111100 01
Q ss_pred cChhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceE
Q 003909 669 VEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
-.|+-=...++.+.-. .+.+++|||+.+|+.+-+.||+..
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 2233323444444433 468999999999999999999986
No 103
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.49 E-value=0.00054 Score=72.69 Aligned_cols=116 Identities=17% Similarity=0.145 Sum_probs=81.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..+.. .++..++...- .-.|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----~Iv~sddv~~~----------------KP~P 275 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----VIVAAEDVYRG----------------KPDP 275 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce----EEEecCcCCCC----------------CCCH
Confidence 477999999999999999999999999999999999999876431 12222111100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCCccHH-HHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGSGTAV-AKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~~~~~-~~~~ad~v~~~ 727 (787)
+-=...++.+.-..+.+++|||+.+|+.+-+.||+-. ++.++.+. -...||+++.+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC
Confidence 3344566666666788999999999999999999944 34433222 12347887754
No 104
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.48 E-value=0.001 Score=68.53 Aligned_cols=96 Identities=15% Similarity=0.061 Sum_probs=66.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++|+.|+++|+++.++||.....+..+.+.+|+..... ..++..++... ..-.|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~---d~i~~~~~~~~----------------~KP~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP---DHVVTTDDVPA----------------GRPYP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc---eEEEcCCcCCC----------------CCCCh
Confidence 567899999999999999999999999999888888887755321 11111111100 01223
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCc
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADI 706 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~v 706 (787)
+-=...++.+.-. .+.+++|||+.+|+.+-+.||+
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 3333444444433 3679999999999999999998
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.48 E-value=0.00037 Score=69.25 Aligned_cols=88 Identities=19% Similarity=0.324 Sum_probs=63.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHhCC--CCCccccccccccchhhccCChHHHHHhhccceE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN----KSTAESICHKIGA--FDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~----~~~a~~~a~~~gi--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
.+.+++++.++.|+++|+++.++|||. ..++..+.+.+|+ .... .. +
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f----~v-----------------------i 166 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN----PV-----------------------I 166 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce----eE-----------------------E
Confidence 477889999999999999999999985 4578888888999 3321 11 2
Q ss_pred EEecCh--hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEec
Q 003909 666 FTRVEP--SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAM 710 (787)
Q Consensus 666 ~~~~~p--~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~ 710 (787)
++..+. ..|...+ ++.+ .++++||..+|+.+-+.||+ +|.+
T Consensus 167 l~gd~~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 167 FAGDKPGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred EcCCCCCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 221111 2344433 3444 47889999999999999998 4444
No 106
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.45 E-value=0.0011 Score=61.69 Aligned_cols=103 Identities=16% Similarity=0.164 Sum_probs=66.2
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHHh---C--CCC-CccccccccccchhhccCChHHHHHhh
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE---SICHKI---G--AFD-HLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~---~~a~~~---g--i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
++.+.+++++++++++++|++++++|||+...+. ...+++ | +.. +....++.... .+..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~-----~~~~e------ 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFA-----ALHRE------ 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchh-----hhhcc------
Confidence 4678999999999999999999999999999884 566552 3 332 21111111110 00000
Q ss_pred ccceEEEecChhhHHHHHHHHhh-----CCCEEEEEcCCccCHHHHhhCCce
Q 003909 661 QHMALFTRVEPSHKRMLVEALQN-----QNEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~~-----~~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
+..+...+.|...++.+.+ ....++.+||+.+|+.+-+++|+.
T Consensus 94 ----~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 ----VISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----cccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 1111122347777776665 345667799999999998888774
No 107
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.42 E-value=0.00043 Score=69.19 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=70.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|+++|++++++|+.+...+....+.+|+..+.. .++...+... ..-.|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~----------------~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD----AVITSEEEGV----------------EKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc----EEEEeccCCC----------------CCCCH
Confidence 578999999999999999999999999988888899999865431 1111111100 01122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEecC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADI-GIAMG 711 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~v-gia~~ 711 (787)
+--..+.+.+....+.+++|||+. +|+.+-+.||+ .|.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 322344444544567899999998 99999999998 45554
No 108
>PRK11587 putative phosphatase; Provisional
Probab=97.39 E-value=0.00091 Score=66.64 Aligned_cols=115 Identities=16% Similarity=0.062 Sum_probs=76.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+... ..++..+.... ..-.|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-----~~i~~~~~~~~----------------~KP~p 141 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-----EVFVTAERVKR----------------GKPEP 141 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-----cEEEEHHHhcC----------------CCCCc
Confidence 5789999999999999999999999988777777777776321 11222211110 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCcc-HHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGT-AVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~-~~~~~~ad~v~~~ 727 (787)
+--....+.+.-..+.+++|||+.+|+.+-+.||+ .|++.++. ......+|+++.+
T Consensus 142 ~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 142 DAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 33344455555557889999999999999999998 45665432 2223356776654
No 109
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.38 E-value=0.00044 Score=68.82 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=62.8
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGD----NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd----~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+.+.+++.++.++++|+++.++|++ ...++..+.+.+|+.... ..++.++....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f----~~i~~~d~~~~------------------ 172 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN----PVIFAGDKPGQ------------------ 172 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe----eEEECCCCCCC------------------
Confidence 4555999999999999999999999 667899999999997532 11111111100
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-Eec
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAM 710 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~ 710 (787)
..| +|.. .+++.+ .++++||+.||+.+-+.||+- |++
T Consensus 173 ~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 173 YQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 012 2332 334444 478899999999999999984 444
No 110
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.37 E-value=0.00074 Score=63.59 Aligned_cols=144 Identities=16% Similarity=0.193 Sum_probs=89.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhc---------------cCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFE---------------ELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 656 (787)
.+-|++.++++.|++. ...+++|-.-.+-++++|+.+|+...........++..... .+..+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5779999999999887 45555555566678899999999654322111111111000 0111111
Q ss_pred HHhhccceEEEecChhh---------------HHHHHHHHhhC---CCEEEEEcCCccCHHHHhhCC-ce-EecC-CccH
Q 003909 657 TVALQHMALFTRVEPSH---------------KRMLVEALQNQ---NEVVAMTGDGVNDAPALKKAD-IG-IAMG-SGTA 715 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~---------------K~~~v~~l~~~---~~~v~~vGDg~ND~~ml~~A~-vg-ia~~-~~~~ 715 (787)
...+. .+|.|..|.+ |..+++.+... ....+.+||+..|+.||+.+. -| +|+. ||.+
T Consensus 162 fe~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 11111 2456666654 44444444332 234678899999999999883 33 6666 8899
Q ss_pred HHHhhcCeeccCCCchHHHHHHH
Q 003909 716 VAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 716 ~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
-+...||+.+.+.+...+..+|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 99999999998888888777774
No 111
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.35 E-value=0.00052 Score=68.57 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=71.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+.... ..++...+...- .-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~iv~s~~~~~~----------------KP~p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL----DLLLSTHTFGYP----------------KEDQ 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC----CEEEEeeeCCCC----------------CCCH
Confidence 67899999999999999999999999998888888888876532 111111111000 0112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce--EecCCcc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG--IAMGSGT 714 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg--ia~~~~~ 714 (787)
+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+. +++.++.
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence 222344455554567899999999999999999996 4455443
No 112
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.35 E-value=0.00059 Score=66.79 Aligned_cols=93 Identities=22% Similarity=0.130 Sum_probs=67.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
+++.+...++++.|+++|+++.++||.+...+..+.+.+|+..... .++..+.. .....
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~-----------------~~KP~ 163 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP----VQIWMEDC-----------------PPKPN 163 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC----EEEeecCC-----------------CCCcC
Confidence 4456667999999999999999999999999999999999876431 11111111 00133
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A 704 (787)
|+.-..+++.+....+.+++|||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444556666666677899999999999987654
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.33 E-value=0.00072 Score=66.26 Aligned_cols=97 Identities=18% Similarity=0.257 Sum_probs=69.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|+++|++++++|+-+...+....+.+|+..+. ..++..++.... .-.|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f----d~i~~s~~~~~~----------------KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF----DAVLSADAVRAY----------------KPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh----heeEehhhcCCC----------------CCCH
Confidence 47899999999999999999999999999999999999986532 112211111100 1122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
+-=..+.+.+....+.+++|||+.+|+.+-+.||+-.
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 2224455555555778999999999999999999854
No 114
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.31 E-value=0.00046 Score=62.93 Aligned_cols=107 Identities=18% Similarity=0.097 Sum_probs=76.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhC----CCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG----AFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
.++|+.++.++.+++++++++++|+.......++.++++ +....+..+...+...-.. ..++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h-------------~i~~~ 139 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQH-------------SIKYT 139 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCce-------------eeecC
Confidence 589999999999999999999999999999999999887 3322111111111100000 00111
Q ss_pred ecC--hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 668 RVE--PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 668 ~~~--p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
..+ .-+|...++.+++..+.+.++|||..|+++-+.+|+-.|-.
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~ 185 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKD 185 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhHH
Confidence 111 24789999999999999999999999999998888877753
No 115
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.27 E-value=0.0011 Score=60.16 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=67.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCC--------HHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhcc
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDN--------KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQH 662 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~--------~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (787)
.++.|++.++++.|+++|++++++|+.. ...+..+.+.+|+..... ...+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~-~--------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL-----YACP-H--------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE-----EECC-C---------------
Confidence 3678999999999999999999999999 777888899988853210 0000 0
Q ss_pred ceEEEecChhhHHHHHHHHh-hCCCEEEEEcC-CccCHHHHhhCCce
Q 003909 663 MALFTRVEPSHKRMLVEALQ-NQNEVVAMTGD-GVNDAPALKKADIG 707 (787)
Q Consensus 663 ~~v~~~~~p~~K~~~v~~l~-~~~~~v~~vGD-g~ND~~ml~~A~vg 707 (787)
...-.|+.=..+++.++ -..+.+++||| ..+|+.+-+.+|+-
T Consensus 83 ---~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00112333345556663 55678999999 69999999999984
No 116
>PRK06769 hypothetical protein; Validated
Probab=97.19 E-value=0.0012 Score=63.04 Aligned_cols=101 Identities=13% Similarity=-0.015 Sum_probs=63.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHH--------HHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccc
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKS--------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~--------~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (787)
++-|++.+++++|+++|++++++|+.... ......+..|+....... ...++...
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~~~-------------- 90 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCP---HKHGDGCE-------------- 90 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECc---CCCCCCCC--------------
Confidence 36899999999999999999999987641 123334556665421100 00000000
Q ss_pred eEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecC
Q 003909 664 ALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMG 711 (787)
Q Consensus 664 ~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~ 711 (787)
...-.|+-=..+++.+....+.+++|||+.+|+.+-+.||+-. ++.
T Consensus 91 --~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 91 --CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred --CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 0012233334555555555678999999999999999999954 443
No 117
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.16 E-value=0.0015 Score=68.82 Aligned_cols=108 Identities=15% Similarity=0.070 Sum_probs=75.8
Q ss_pred cCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC-CccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
..+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. +... +...+.... +... .--.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~----i~~~~~~~~--------~~~~-~~~~ 250 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD----LIGRPPDMH--------FQRE-QGDK 250 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh----hhCCcchhh--------hccc-CCCC
Confidence 567899999999999999999999999999999999999999875 2110 000000000 0000 0001
Q ss_pred ecChhhHHHHHHHHhh-CCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 668 RVEPSHKRMLVEALQN-QNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~-~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
+-.|+-+...++.+.. ..+.+++|||..+|+.+-+.||+-+.
T Consensus 251 kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 251 RPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred CCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 2446667777766544 34789999999999999999999643
No 118
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.12 E-value=0.002 Score=66.94 Aligned_cols=118 Identities=19% Similarity=0.246 Sum_probs=75.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|++.|+++.++|+.+......+.+..+........ . .+.+++... ....|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~-~-~v~~~~~~~----------------~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGL-D-VFAGDDVPK----------------KKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCce-E-EEeccccCC----------------CCCCH
Confidence 57899999999999999999999999988888777665432211000 0 011111000 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec-CCc--cHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-GSG--TAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~-~~~--~~~~~~~ad~v~~~ 727 (787)
+-=..+++.+.-..+.+++|||+.+|+.+-+.||+.+.. ..+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 333455566655567899999999999999999986543 222 22112357887754
No 119
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.12 E-value=0.0023 Score=71.44 Aligned_cols=122 Identities=10% Similarity=0.158 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..+... ++..++... ...|
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~----i~~~d~v~~-----------------~~kP 388 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE----TFSIEQINS-----------------LNKS 388 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce----eEecCCCCC-----------------CCCc
Confidence 6789999999999999999999999999999999999998764311 122211100 0123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCC--ccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS--GTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~--~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+--...++.+ ..+.+++|||+.+|+.+-+.||+ .|++.. ..+.....+|+++. ++..+..++.
T Consensus 389 ~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 389 DLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred HHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 2222223333 24679999999999999999998 444432 22222345788874 3566655554
No 120
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.09 E-value=0.0025 Score=60.13 Aligned_cols=114 Identities=10% Similarity=0.022 Sum_probs=73.6
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHH
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGD-NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTV 658 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd-~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (787)
+........-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+...... ..+..
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~----------------~~~~~ 96 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT----------------VPMHS 96 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc----------------ccHHH
Confidence 34455555556678999999999999999999999987 88889999999998611000 00000
Q ss_pred hhccceEEEecChhhH--HHHHHHHh------hCCCEEEEEcCCccCHHHHhhCCceEec
Q 003909 659 ALQHMALFTRVEPSHK--RMLVEALQ------NQNEVVAMTGDGVNDAPALKKADIGIAM 710 (787)
Q Consensus 659 ~~~~~~v~~~~~p~~K--~~~v~~l~------~~~~~v~~vGDg~ND~~ml~~A~vgia~ 710 (787)
.+. ..+.++..+..| ..+.+.+. -..+.+++|||+..|+.+-++||+-++.
T Consensus 97 ~Fd-~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 97 LFD-DRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hce-eeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 000 001111111111 23344443 2357899999999999999999996654
No 121
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.02 E-value=0.0011 Score=63.27 Aligned_cols=98 Identities=20% Similarity=0.314 Sum_probs=71.8
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.+.+++|+++|++++++|+.+...+....+++|+.... ..++...+.... ...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f----~~i~~~~~~~~~----------------Kp~ 135 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF----DEIISSDDVGSR----------------KPD 135 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC----SEEEEGGGSSSS----------------TTS
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc----ccccccchhhhh----------------hhH
Confidence 367899999999999999999999999999999999999987432 111111111110 012
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
|+-=..+++.+.-..+.+++|||+..|+.+-+.||+.-
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 23334556666666788999999999999999999853
No 122
>PLN02423 phosphomannomutase
Probab=97.01 E-value=0.0045 Score=62.66 Aligned_cols=43 Identities=23% Similarity=0.305 Sum_probs=35.6
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CccCHHHHhh-CCceEecCCccH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGD----GVNDAPALKK-ADIGIAMGSGTA 715 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGD----g~ND~~ml~~-A~vgia~~~~~~ 715 (787)
.+|...++.++ ..+.|++||| +.||++||+. --.|+++.+-.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37899999998 7788999999 8999999997 556999964433
No 123
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.97 E-value=0.0057 Score=58.89 Aligned_cols=125 Identities=21% Similarity=0.219 Sum_probs=71.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHhCCCCCccccccccccchhh--ccCChH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEF--EELPAM 654 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~~gi~~~~~~~~~~~~~~~~~--~~~~~~ 654 (787)
.+.|++.+++++|+++|+++.++|..+. .....+.+..|+... .++..... +..
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~------~i~~~~~~~~~~~--- 99 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD------GIYYCPHHPEDGC--- 99 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc------eEEECCCCCCCCC---
Confidence 4679999999999999999999998863 112223444554210 00000000 000
Q ss_pred HHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCCcc--H-HHHhhc--CeeccCC
Q 003909 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGSGT--A-VAKSAS--DMVLADD 728 (787)
Q Consensus 655 ~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~~~--~-~~~~~a--d~v~~~~ 728 (787)
-...-.|+--..+++.+....+.+++|||+.+|+.+-+.||+.+ .+..+. . .....+ |+++.+
T Consensus 100 ----------~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~- 168 (181)
T PRK08942 100 ----------DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDS- 168 (181)
T ss_pred ----------cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecC-
Confidence 00112234344555556555678999999999999999999843 333221 1 122234 776643
Q ss_pred CchHHHHHH
Q 003909 729 NFATIVAAV 737 (787)
Q Consensus 729 ~~~~i~~~i 737 (787)
+..+.+++
T Consensus 169 -l~el~~~l 176 (181)
T PRK08942 169 -LADLPQAL 176 (181)
T ss_pred -HHHHHHHH
Confidence 55555544
No 124
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.96 E-value=0.0017 Score=62.78 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=63.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++|+.|+++|+++.++|+... +....+.+|+..... .++...+... .+..|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~kp~p 144 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD----AIVDPAEIKK----------------GKPDP 144 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc----EEEehhhcCC----------------CCCCh
Confidence 5789999999999999999999998643 456788888865431 1111111100 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
+-=...++.+.-..+.+++|||+.+|+.+-+.||+-.
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 2223444444444567899999999999999999843
No 125
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.94 E-value=0.0028 Score=61.12 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=65.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|+++|++++++|+..... ..+..++|+..... .++.+.+.. ...-.|
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~----~i~~~~~~~----------------~~KP~~ 143 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD----VVIFSGDVG----------------RGKPDP 143 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC----EEEEcCCCC----------------CCCCCH
Confidence 578999999999999999999999999888 66666688865321 111111100 001223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
+--..+.+.+......+++|||+..|+.+-+.+|+-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 144 DIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 333445555555577899999999999999999983
No 126
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.93 E-value=0.0019 Score=62.47 Aligned_cols=96 Identities=19% Similarity=0.163 Sum_probs=64.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++.|++.++++.|+++|++++++|+. ..+..+.+.+|+...... ++....... ....
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~----v~~~~~~~~----------------~kp~ 144 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA----IVDADEVKE----------------GKPH 144 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE----eeehhhCCC----------------CCCC
Confidence 368999999999999999999999998 567788888888653211 111110000 0011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
|+-=..+.+.+....+.+++|||+.+|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 22112334444444567889999999999999999853
No 127
>PLN02940 riboflavin kinase
Probab=96.89 E-value=0.0029 Score=68.41 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=76.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-HhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH-KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.|++.+.++.|+++|+++.++|+.....+....+ ..|+.... +.++..++... ..-.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F----d~ii~~d~v~~----------------~KP~ 152 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF----SVIVGGDEVEK----------------GKPS 152 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC----CEEEehhhcCC----------------CCCC
Confidence 467999999999999999999999999888877665 67775432 11122211100 0122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCCc--cHHHHhhcCeeccC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGSG--TAVAKSASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~~--~~~~~~~ad~v~~~ 727 (787)
|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+.. ++..+ .......+|+++.+
T Consensus 153 p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 153 PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 33334455555555678999999999999999999864 34332 22233346666543
No 128
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.89 E-value=0.0027 Score=63.57 Aligned_cols=98 Identities=17% Similarity=0.160 Sum_probs=68.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.+++|+++ ++++++|+.....+....+++|+..... .++...+... ....|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~~----------------~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD----DIFVSEDAGI----------------QKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC----EEEEcCccCC----------------CCCCH
Confidence 5789999999999999 9999999999999999999999866431 1111111100 01222
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCc-cCHHHHhhCCc-eEec
Q 003909 672 SHKRMLVEAL-QNQNEVVAMTGDGV-NDAPALKKADI-GIAM 710 (787)
Q Consensus 672 ~~K~~~v~~l-~~~~~~v~~vGDg~-ND~~ml~~A~v-gia~ 710 (787)
+-=...++.+ .-..+.+++|||+. +|+.+-+.+|+ +|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence 2224455555 44566799999998 89999999998 3344
No 129
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.82 E-value=0.005 Score=58.93 Aligned_cols=125 Identities=16% Similarity=0.112 Sum_probs=67.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHH---------------HHHHHHHHhCCCCCccccccccccchhhccCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKS---------------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~---------------~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (787)
++.|++.++|++|+++|++++++|.-+.. ....+..+.|+.............+ .......
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~--~~~~~~~-- 101 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG--VEEFRQV-- 101 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc--cccccCC--
Confidence 36789999999999999999999987641 1122333444331100000000000 0000000
Q ss_pred HHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE--ecCCccH---HHHhhcCeeccC
Q 003909 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI--AMGSGTA---VAKSASDMVLAD 727 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi--a~~~~~~---~~~~~ad~v~~~ 727 (787)
.-...-.|+-=....+.+.-..+.++||||..+|+.+-+.||+.. .+..+.. .....+|+++.+
T Consensus 102 -------~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 102 -------CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS 170 (176)
T ss_pred -------CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc
Confidence 000011233223444444445678899999999999999999953 4433321 112347887753
No 130
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.76 E-value=0.0036 Score=59.49 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=65.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN-KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~-~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+.|++.+++++|++.|++++++|+.+ ...+..+.+.+|+.... + ...-.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~--------------------~~KP~ 93 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------H--------------------AVKPP 93 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------C--------------------CCCCC
Confidence 678999999999999999999999998 67777888888764310 0 00112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce-EecC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG-IAMG 711 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vg-ia~~ 711 (787)
|+-=..+++.+....+.+++|||.. .|+.+-+.||+- |.+.
T Consensus 94 p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 94 GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 2222334444444467799999998 799999999994 4443
No 131
>PRK09449 dUMP phosphatase; Provisional
Probab=96.74 E-value=0.005 Score=61.65 Aligned_cols=123 Identities=12% Similarity=0.119 Sum_probs=76.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+ +|+++.++|+.....+....+.+|+..... .++...+... ..-.|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----~v~~~~~~~~----------------~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD----LLVISEQVGV----------------AKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC----EEEEECccCC----------------CCCCH
Confidence 47899999999999 689999999999988888888888865321 1111111100 01122
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCc-cCHHHHhhCCce-EecC-CccHH-HHhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGV-NDAPALKKADIG-IAMG-SGTAV-AKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~-ND~~ml~~A~vg-ia~~-~~~~~-~~~~ad~v~~~~~~~~i~~~i 737 (787)
+-=..+++.+.-. .+.+++|||+. +|+.+-+.||+- |.+. .+... ....+|+++.+ +..+..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 2223444444422 35799999998 799999999995 4443 22111 11246776643 55555544
No 132
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.74 E-value=0.009 Score=58.68 Aligned_cols=81 Identities=16% Similarity=0.131 Sum_probs=57.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
.+.-|++.++++.|+++|++|+++|||+... +..-.++.|+.... . ++.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~----~------------------------LiL 170 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWK----H------------------------LIL 170 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcC----e------------------------eee
Confidence 4788999999999999999999999999766 44455667776421 1 222
Q ss_pred ec-------ChhhHHHHHHHHhhCCC-EEEEEcCCccCHH
Q 003909 668 RV-------EPSHKRMLVEALQNQNE-VVAMTGDGVNDAP 699 (787)
Q Consensus 668 ~~-------~p~~K~~~v~~l~~~~~-~v~~vGDg~ND~~ 699 (787)
|. ...-|...-+.+.+.|. +++.+||..+|+.
T Consensus 171 R~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 171 RGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred cCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 21 01226677766766665 5577999999983
No 133
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.66 E-value=0.0083 Score=56.66 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=34.6
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC
Q 003909 596 EVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (787)
Q Consensus 596 ~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~ 632 (787)
.+...+.+|+++|++|+++|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999988
No 134
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.60 E-value=0.011 Score=59.89 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=60.5
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
..++-|++.+.++.|+++|++++++|+|.... +....++.|+...... .++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d--------------------------~ll 169 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE--------------------------HLL 169 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc--------------------------eEE
Confidence 34578999999999999999999999998544 3456677888642100 133
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHh
Q 003909 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~ 702 (787)
.+.....|....+.+.+..+.+++|||..+|.....
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 332223455555566555567999999999996543
No 135
>PLN02811 hydrolase
Probab=96.60 E-value=0.0065 Score=60.59 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=61.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHhCCCCCccccccccccch--hhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES-ICHKIGAFDHLVDFVGRSYTAS--EFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~-~a~~~gi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.+.|+.|+++|+++.++||-....... ..+..++.... ..++..+ +... ..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f----~~i~~~~~~~~~~----------------~K 137 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM----HHVVTGDDPEVKQ----------------GK 137 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC----CEEEECChhhccC----------------CC
Confidence 578999999999999999999999987654432 22223333211 1111111 1100 01
Q ss_pred cChhhHHHHHHHHh---hCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 669 VEPSHKRMLVEALQ---NQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 669 ~~p~~K~~~v~~l~---~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
-.|+-=...++.+. -..+.+++|||+..|+.+-+.||+...
T Consensus 138 P~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 138 PAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 12333344555553 335789999999999999999999543
No 136
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.60 E-value=0.0054 Score=60.33 Aligned_cols=95 Identities=14% Similarity=0.129 Sum_probs=63.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|++++++|+-... .....+.+|+..... .++...+... ..-.|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd----~i~~s~~~~~----------------~KP~~ 163 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFD----FVVTSYEVGA----------------EKPDP 163 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcc----eEEeecccCC----------------CCCCH
Confidence 57899999999999999999999987654 467778888754321 1111111000 01122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG 707 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vg 707 (787)
+-=..+++.+....+.+++|||+. +|+.+-+.||+-
T Consensus 164 ~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 164 KIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 222334444444567899999997 899999999874
No 137
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.58 E-value=0.0062 Score=56.34 Aligned_cols=100 Identities=19% Similarity=0.212 Sum_probs=62.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHhCCCCCccccccccccchhhccCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (787)
++.|++.++++.|+++|++++++|+.+. ..+....+.+|+..... +.......+...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~~~------- 98 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGV-LFCPHHPADNCS------- 98 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EECCCCCCCCCC-------
Confidence 4789999999999999999999999763 34566777888752100 000000000000
Q ss_pred HHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
...-.|+-=..+++.+.-..+.+++|||+..|+.+-+.+|+-.
T Consensus 99 ---------~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 99 ---------CRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---------CCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 0001122223344444444577999999999999999999854
No 138
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.51 E-value=0.0093 Score=58.91 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=68.3
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh---CCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI---GAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
+-++.|++.+++++|+++|+++.++|..+......+.+.. ++...... .++. .+-
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~----~fd~------------------~~g 150 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSG----YFDT------------------TVG 150 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcce----EEEe------------------Ccc
Confidence 4578999999999999999999999999988777776665 23221100 0000 011
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
..-.|+-=..+++.+.-..+.++++||...|+.+-+.||+-..
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 1123333355566666566789999999999999999999654
No 139
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.46 E-value=0.012 Score=53.48 Aligned_cols=85 Identities=22% Similarity=0.350 Sum_probs=68.9
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+..|+.++-+.+++++|++++++|.-+...+...++.+|++. ++--..
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f-------------------------------i~~A~K 93 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF-------------------------------IYRAKK 93 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce-------------------------------eecccC
Confidence 4689999999999999999999999999999999999999976 333334
Q ss_pred hhhH--HHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc
Q 003909 671 PSHK--RMLVEALQNQNEVVAMTGDGV-NDAPALKKADI 706 (787)
Q Consensus 671 p~~K--~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~v 706 (787)
|..+ .+.++.++-..+.|+||||.. .|+-.=+.||+
T Consensus 94 P~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 94 PFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred ccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 4433 356666666788999999986 68887777776
No 140
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.42 E-value=0.0071 Score=56.65 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=61.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHhCCCCCcccccccccc----chhhccCC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN---------------KSTAESICHKIGAFDHLVDFVGRSYT----ASEFEELP 652 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~---------------~~~a~~~a~~~gi~~~~~~~~~~~~~----~~~~~~~~ 652 (787)
++-|++.++|++|+++|++++++|... ...+..+.+.+|+... ...+. .++..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-----~ii~~~~~~~~~~~--- 100 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD-----DVLICPHFPDDNCD--- 100 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee-----EEEECCCCCCCCCC---
Confidence 467899999999999999999999853 4456677788887510 00000 00000
Q ss_pred hHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 653 AMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 653 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
...-.|+-=..+++.+....+.+++|||+.+|+.+-+.||+...
T Consensus 101 -------------~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 101 -------------CRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------CCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00011222223333333345679999999999999999999654
No 141
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.39 E-value=0.0078 Score=56.15 Aligned_cols=90 Identities=18% Similarity=0.151 Sum_probs=59.7
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 672 (787)
..+++.+.++.|+++|+++.++|+.....+....+.. +..... .++..+. +.....|+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~----~i~~~~~-----------------~~~Kp~~~ 122 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFD----LILGSDE-----------------FGAKPEPE 122 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCc----EEEecCC-----------------CCCCcCHH
Confidence 3478999999999999999999999999998888875 433210 1111100 00112232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC
Q 003909 673 HKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (787)
Q Consensus 673 ~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~ 705 (787)
-=..+.+.+.... .+++|||+.+|+.+-+.||
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2233444444445 7899999999999988875
No 142
>PLN03017 trehalose-phosphatase
Probab=96.29 E-value=0.035 Score=58.48 Aligned_cols=47 Identities=15% Similarity=0.079 Sum_probs=38.6
Q ss_pred CCcEEEEEeccCC--CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003909 579 KDLTFIGLVGMLD--PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (787)
Q Consensus 579 ~~l~~lG~i~~~d--~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a 626 (787)
-|++|+-+..-.+ .+.+++.++|++|. +|+.++++|||....+..+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 4667766555333 58999999999999 78999999999999998874
No 143
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.26 E-value=0.012 Score=52.94 Aligned_cols=88 Identities=6% Similarity=0.037 Sum_probs=59.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHhC-------CCCCccccccccccchhhccCChHHHHHhhccc
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGD-NKSTAESICHKIG-------AFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd-~~~~a~~~a~~~g-------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (787)
++.+++.+.++.|+++|++++++|+. ....+..+.+..+ +.... ..+..+..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f----~~~~~~~~---------------- 88 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYF----DPLTIGYW---------------- 88 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhh----hhhhhcCC----------------
Confidence 68999999999999999999999999 7777777777776 22111 00000000
Q ss_pred eEEEecChhhHHHHHHHHh--hCCCEEEEEcCCccCHHHHhh
Q 003909 664 ALFTRVEPSHKRMLVEALQ--NQNEVVAMTGDGVNDAPALKK 703 (787)
Q Consensus 664 ~v~~~~~p~~K~~~v~~l~--~~~~~v~~vGDg~ND~~ml~~ 703 (787)
...|+.=..+++.+. -..+.+++|||...|+..++.
T Consensus 89 ----~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 89 ----LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ----CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 011333334555555 556889999999999877654
No 144
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.22 E-value=0.026 Score=67.10 Aligned_cols=50 Identities=12% Similarity=0.124 Sum_probs=38.4
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHHh
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSC-MTAGIRVIVVTGDNKSTAESICHKI 629 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l-~~~gi~v~i~TGd~~~~a~~~a~~~ 629 (787)
|++++-.-.....+.+++.+++++| ++.|+.|+++|||...+.......+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5555533223346788999999997 7889999999999999988877543
No 145
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.06 E-value=0.025 Score=69.29 Aligned_cols=127 Identities=13% Similarity=0.184 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC-CCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+.|++.+.+++|+++|++++++|+.....+....+.+|+. ... ..++..++.... .-.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F----d~iv~~~~~~~~----------------KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF----DAIVSADAFENL----------------KPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC----CEEEECcccccC----------------CCC
Confidence 36799999999999999999999999999999999999985 221 111222111100 122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCc---cHHHHhhcCeeccCCCchHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSG---TAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~---~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
|+-=...++.+....+.+++|||..+|+.+-+.||+ .|++..+ .+.....+|+++.+-..-.+.+++.
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 333345556665567789999999999999999999 4444422 2233345777776654444555543
No 146
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.03 E-value=0.058 Score=55.06 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=37.8
Q ss_pred EEeccCCC----CChhHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHhCCC
Q 003909 585 GLVGMLDP----PREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAF 632 (787)
Q Consensus 585 G~i~~~d~----~~~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~~a~~~gi~ 632 (787)
|++.-.++ +-|++.++|++|+++|++++++||++..+ .....+++|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 88999999999999999999999987776 44455667875
No 147
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.93 E-value=0.024 Score=53.44 Aligned_cols=94 Identities=12% Similarity=0.103 Sum_probs=59.3
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHH------------HHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKS------------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~------------~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
+-|++.+++++|+++|+++.++|..+.. .+..+.+.+|+.... ++.....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~------ii~~~~~------------ 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQV------LAATHAG------------ 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEE------EEecCCC------------
Confidence 3489999999999999999999976542 456678888874311 0000000
Q ss_pred ccceEEEecChhhHHHHHHHHh--hCCCEEEEEcCCc--------cCHHHHhhCCceE
Q 003909 661 QHMALFTRVEPSHKRMLVEALQ--NQNEVVAMTGDGV--------NDAPALKKADIGI 708 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~--~~~~~v~~vGDg~--------ND~~ml~~A~vgi 708 (787)
....-.|+-=..+.+.+. -..+.+++|||.. +|+.+-+.||+-.
T Consensus 105 ----~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ----LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ----CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000011222233444443 3346799999986 6999998888754
No 148
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.93 E-value=0.011 Score=54.76 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=66.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+..... ..++..++.. +..
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f---~~i~~~~d~~------------------~~K 101 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFG---YRRLFRDECV------------------FVK 101 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEe---eeEEECcccc------------------ccC
Confidence 357999999999999 579999999999999999999998854211 1111111110 011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~ 710 (787)
|. =...++.+....+.+++|||+.+|+.+-+.+++-|..
T Consensus 102 P~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 21 1122344445577899999999999998788776654
No 149
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.90 E-value=0.084 Score=53.42 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=61.6
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH--HHHHHhCCCC-CccccccccccchhhccCChHHHHHhhc
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE--SICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQ 661 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~--~~a~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (787)
|.+.-...+-|++.+++++|+++|++++++|..+..... ...+++|+.. ... .
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~----~-------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPE----M-------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccc----e--------------------
Confidence 455556788999999999999999999999997665544 5668888864 210 1
Q ss_pred cceEEEecChhhHHHHHHHHhh---CCCEEEEEcCCccCHHHHhhCCc
Q 003909 662 HMALFTRVEPSHKRMLVEALQN---QNEVVAMTGDGVNDAPALKKADI 706 (787)
Q Consensus 662 ~~~v~~~~~p~~K~~~v~~l~~---~~~~v~~vGDg~ND~~ml~~A~v 706 (787)
+++.. ......+.+.+++ .+..+.++||+..|...+..++.
T Consensus 73 ---Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 73 ---IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ---EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 11111 0011122222222 35679999999999988865543
No 150
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.69 E-value=0.047 Score=54.07 Aligned_cols=104 Identities=20% Similarity=0.229 Sum_probs=66.8
Q ss_pred CCChhHHHHHHHH--HhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch-hhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSC--MTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS-EFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l--~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
|+.|+.+++++.+ ++.|+.++++|.-+......+-+.-|+...... +++.. .++.-.......... .-+.+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~----I~TNpa~~~~~G~l~v~pyh~--h~C~~ 144 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE----IFTNPACFDADGRLRVRPYHS--HGCSL 144 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce----EEeCCceecCCceEEEeCccC--CCCCc
Confidence 6788999999999 458999999999999999999999998754311 11111 000000000000000 01123
Q ss_pred cCh-hhHHHHHHHHhhC----C---CEEEEEcCCccCHHHH
Q 003909 669 VEP-SHKRMLVEALQNQ----N---EVVAMTGDGVNDAPAL 701 (787)
Q Consensus 669 ~~p-~~K~~~v~~l~~~----~---~~v~~vGDg~ND~~ml 701 (787)
+.| .=|..+++.+... | .+|++||||.||....
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 433 3588888777654 3 6899999999998764
No 151
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=95.68 E-value=0.031 Score=54.71 Aligned_cols=98 Identities=15% Similarity=0.107 Sum_probs=62.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-hCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.|++.++++.|+++|++++++|.-+.......... .++.... ..++...+.... .-.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~~~~----------------KP~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA----DHIYLSQDLGMR----------------KPE 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc----CEEEEecccCCC----------------CCC
Confidence 4789999999999999999999999887665443222 2332211 111111111000 112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
|+-=..+++.+....+.+++|||+..|+.+-+.||+...
T Consensus 144 p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 144 ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 332244555555556789999999999999999999543
No 152
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.50 E-value=0.029 Score=55.49 Aligned_cols=102 Identities=13% Similarity=0.112 Sum_probs=61.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST--AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~--a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
-++.|++.++++.|+++|++++++|+..... ........++.... ..++...+.. ...
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~~----------------~~K 152 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF----DAVVESCLEG----------------LRK 152 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC----CEEEEeeecC----------------CCC
Confidence 3578999999999999999999999875433 22223333443221 0011000000 001
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCC
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGS 712 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~ 712 (787)
-.|+-=..+++.+.-..+.+++|||...|+.+-+.||+- |.+.+
T Consensus 153 P~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 122222344455554567788899999999999999994 44443
No 153
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.39 E-value=0.051 Score=57.54 Aligned_cols=100 Identities=14% Similarity=0.013 Sum_probs=61.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHhCCCCCccccccccccchh-hccCChH
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGD---------------NKSTAESICHKIGAFDHLVDFVGRSYTASE-FEELPAM 654 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd---------------~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~-~~~~~~~ 654 (787)
-++.|++.+++++|+++|++++++|+- ....+..+.+..|+... ...+.... .+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd-----~i~i~~~~~sd~---- 99 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD-----EVLICPHFPEDN---- 99 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee-----eEEEeCCcCccc----
Confidence 468999999999999999999999984 23345566777776411 00000000 000
Q ss_pred HHHHhhccceEEEe-cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 655 QQTVALQHMALFTR-VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 655 ~~~~~~~~~~v~~~-~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
..++ ..|.-=..+.+.+....+.++||||+.+|+.+-+.||+-..
T Consensus 100 ----------~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 100 ----------CSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0000 11111122223333345789999999999999999999543
No 154
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.31 E-value=0.046 Score=57.84 Aligned_cols=93 Identities=9% Similarity=0.107 Sum_probs=69.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----hCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK----IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
++.+++.++|++|+++|+++.++|.-+...+..+.++ +|+..+... +.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~---------------------------~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDA---------------------------RSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeE---------------------------EEE
Confidence 3578999999999999999999999999999999988 776543211 111
Q ss_pred --ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 668 --RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 668 --~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
...|+.=..+.+.+.-..+.++||||+..|+.+.+.+...|.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 12233333444445445678999999999999999988877553
No 155
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.27 E-value=0.025 Score=57.35 Aligned_cols=65 Identities=18% Similarity=0.228 Sum_probs=47.7
Q ss_pred cChhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhC--------CceEecCCccHHHHhhcCeeccCCCchHHHHH
Q 003909 669 VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKA--------DIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A--------~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
..+.+|...++.+.+. ...++++||+.||.+|++.+ +++|+|+.+ ..+..|++++.+ .+.+.++
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~~--~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLTG--PQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCCC--HHHHHHH
Confidence 3455788877776543 35789999999999999999 588888533 346678998864 5556666
Q ss_pred H
Q 003909 737 V 737 (787)
Q Consensus 737 i 737 (787)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 5
No 156
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=95.26 E-value=0.12 Score=52.49 Aligned_cols=50 Identities=10% Similarity=0.018 Sum_probs=41.6
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHhCCCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTG---DNKSTAESICHKIGAFDH 634 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~~a~~~gi~~~ 634 (787)
|++.-.+.+-|++.++|++|+++|++++++|| |+........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44444566677999999999999999999995 889888888899998643
No 157
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=95.18 E-value=0.027 Score=56.15 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=66.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.| ++++.++|+.....+....+..|+..... ..++++.+.... .-.|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~---~~v~~~~~~~~~----------------KP~p 145 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP---DKLFSGYDIQRW----------------KPDP 145 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc---ceEeeHHhcCCC----------------CCCh
Confidence 4668999999998 48999999999888888888888865421 011122111100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~ 710 (787)
+-=....+.+.-..+.+++|||+.+|+.+-+.||+.+..
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 333444555554567799999999999999999997753
No 158
>PHA02597 30.2 hypothetical protein; Provisional
Probab=95.12 E-value=0.045 Score=53.42 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=58.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|++++ +.+++|..+........+.+|+......+...++..... ...|
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~-------------------~~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD-------------------ESKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC-------------------cccH
Confidence 47899999999999985 566677765555444556666643211110111111100 0112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC--CceE-ecCCc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA--DIGI-AMGSG 713 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A--~vgi-a~~~~ 713 (787)
+--..+++.+. .+.+++|||+.+|+.+-++| |+-. .+..+
T Consensus 134 ~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 134 KLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred HHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecch
Confidence 22222333333 45688999999999999999 9954 45444
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=95.03 E-value=0.067 Score=56.33 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=39.6
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHhCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAF 632 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a---~~~gi~ 632 (787)
|++.-.+.+-|++.++|++|+++|++++++|+++..+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 455556778899999999999999999999999977776666 557764
No 160
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=94.89 E-value=0.072 Score=51.48 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=64.0
Q ss_pred ChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhh
Q 003909 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (787)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 673 (787)
.|+ .+.++.|++. ++..++|+.....+....+.+|+..+.. .++..++... ....|+-
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~~----------------~KP~p~~ 147 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD----AVVAADDVQH----------------HKPAPDT 147 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce----EEEehhhccC----------------CCCChHH
Confidence 344 6899999876 8999999999999999999999875431 1222211110 0122333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 674 KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 674 K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
=....+.+......+++|||+.+|+.+-+.||+-.
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 34555555555667889999999999999999853
No 161
>PLN02580 trehalose-phosphatase
Probab=94.83 E-value=0.042 Score=58.47 Aligned_cols=63 Identities=22% Similarity=0.179 Sum_probs=47.5
Q ss_pred hhHHHHHHHHhhC-C---C---EEEEEcCCccCHHHHhh-----CCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQ-N---E---VVAMTGDGVNDAPALKK-----ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~---~---~v~~vGDg~ND~~ml~~-----A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
-+|...++.+.+. + . .++++||+.||.+||+. +|+||+|+++.... .|++.+.+ .+.|..+++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HHHHHHHHH
Confidence 4898888877654 2 1 24889999999999996 69999999876543 57887754 667777764
No 162
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=94.82 E-value=0.091 Score=52.25 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=77.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.+.+..|+++|+.++++|+.+...+..+.+.+|+..+.. ..+++.+...- .-.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~----~~v~~~dv~~~----------------KP~ 144 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD----VIVTADDVARG----------------KPA 144 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc----hhccHHHHhcC----------------CCC
Confidence 4789999999999999999999999999999999999999987542 22222222111 234
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
|+-=....+.|.-....+++|.|+.+.+.+-++||.-+-
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 565566777776677889999999999999999998654
No 163
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.74 E-value=0.056 Score=46.11 Aligned_cols=49 Identities=18% Similarity=0.213 Sum_probs=36.0
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHhCCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAFD 633 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a---~~~gi~~ 633 (787)
|++...+++-|++.++|++|+++|++++++|..+..+...++ +.+|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 445557788999999999999999999999998866655554 5567653
No 164
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=94.54 E-value=0.13 Score=49.55 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=65.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.+++.+++++|+ .+++++|+.+...+....+.+|+..... .++..++...-. ....-.|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~~~~------------~~~KP~p 144 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFD----GIFCFDTANPDY------------LLPKPSP 144 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhC----eEEEeecccCcc------------CCCCCCH
Confidence 47799999999998 4789999999999999999999865321 111111110000 0001123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
+-=..+++.+....+.+++|||+..|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 3334555666656778999999999999999999854
No 165
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.49 E-value=0.21 Score=46.65 Aligned_cols=92 Identities=17% Similarity=0.150 Sum_probs=71.0
Q ss_pred CCCCChhHHHHHHHHHhCCC--EEEEEcCC-------CHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh
Q 003909 590 LDPPREEVKNAMLSCMTAGI--RVIVVTGD-------NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi--~v~i~TGd-------~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
++++.|+..+.+++|++.+. +++++|.. ....|..+.+.+|+.-.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 56799999999999999977 59999997 47889999999998631
Q ss_pred ccceEEEecChhhHHHHHHHHhhC-----CCEEEEEcCCc-cCHHHHhhCC-ceEecC
Q 003909 661 QHMALFTRVEPSHKRMLVEALQNQ-----NEVVAMTGDGV-NDAPALKKAD-IGIAMG 711 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~~~-----~~~v~~vGDg~-ND~~ml~~A~-vgia~~ 711 (787)
.+....|.-..++++.++.. .+.+++|||-. .|+-|=...| .+|-+.
T Consensus 111 ----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~ 164 (168)
T PF09419_consen 111 ----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVT 164 (168)
T ss_pred ----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEe
Confidence 12234676666788888654 77899999976 6888877776 555443
No 166
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=94.04 E-value=0.25 Score=55.09 Aligned_cols=100 Identities=17% Similarity=0.061 Sum_probs=63.9
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-hCCCCCccc---c-ccccccchhhccCChHHHHHhhccceEEE
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~-~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
+++++.+. +++.|.+ +++|+-+..-++.+|++ +|++.-... . .+..++|.-... .
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~----------------~ 170 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKP----------------G 170 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCC----------------C
Confidence 66665554 4567754 99999999999999987 899853211 0 011222210000 0
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCC
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGS 712 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~ 712 (787)
.+.-++|...++..........+.||+.||.+||+.|+-+.+++.
T Consensus 171 ~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 171 VLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 034467887776433211122677999999999999999999975
No 167
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=93.81 E-value=0.066 Score=53.37 Aligned_cols=89 Identities=16% Similarity=0.147 Sum_probs=56.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+.-|++.+.++.++++|++|+++|||+... +..-.++.|+.... ...+.+..-..- .
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~----~l~lr~~~~~~~----------------~ 174 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWD----HLILRPDKDPSK----------------K 174 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBS----CGEEEEESSTSS-----------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccc----hhcccccccccc----------------c
Confidence 566789999999999999999999998773 33345666754311 111111000000 0
Q ss_pred cChhhHHHHHHHHhhCCC-EEEEEcCCccCHHH
Q 003909 669 VEPSHKRMLVEALQNQNE-VVAMTGDGVNDAPA 700 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~-~v~~vGDg~ND~~m 700 (787)
.....|....+.+.+.|. .++.+||..+|+.-
T Consensus 175 ~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 012347788888888854 56789999999865
No 168
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=93.37 E-value=0.1 Score=49.69 Aligned_cols=116 Identities=20% Similarity=0.241 Sum_probs=67.7
Q ss_pred CCChhHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi-~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
|+.|+..++|+.+++.|. .++|+|.-+......+.+..|+..... .+++.....+-...-.......-.-+.++.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~----~IfTNPa~~da~G~L~v~pyH~~hsC~~CP 159 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS----EIFTNPACVDASGRLLVRPYHTQHSCNLCP 159 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH----HHhcCCcccCCCCcEEeecCCCCCccCcCc
Confidence 678999999999999997 999999999999999999988764221 011100000000000000000000111121
Q ss_pred h-hhHHHHHHHHhhC-------CCEEEEEcCCccCH-HHHhhCCceEecC
Q 003909 671 P-SHKRMLVEALQNQ-------NEVVAMTGDGVNDA-PALKKADIGIAMG 711 (787)
Q Consensus 671 p-~~K~~~v~~l~~~-------~~~v~~vGDg~ND~-~ml~~A~vgia~~ 711 (787)
+ .=|..++..++.. -+.+..+|||.||. |+++...--+||-
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 1 1255555555432 23788999999996 5667776667774
No 169
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=93.22 E-value=0.11 Score=47.34 Aligned_cols=90 Identities=21% Similarity=0.304 Sum_probs=60.8
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHH----HHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTA----ESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a----~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+++=+++.|..-++.|=.++.+|||.+... ..+|+...|.+.. ..+|+.
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~---------------------------pv~f~G 167 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN---------------------------PVIFAG 167 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc---------------------------ceeecc
Confidence 455578899999999999999999998754 4456666664321 114444
Q ss_pred cChh-hHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEec
Q 003909 669 VEPS-HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAM 710 (787)
Q Consensus 669 ~~p~-~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~ 710 (787)
..|. .+..-..++++.+-.+-. ||+.||+.+-+.||+ ||-+
T Consensus 168 dk~k~~qy~Kt~~i~~~~~~IhY-GDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 168 DKPKPGQYTKTQWIQDKNIRIHY-GDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCCcccccccHHHHhcCceEEe-cCCchhhhHHHhcCccceeE
Confidence 3331 223334455666655555 999999999999987 6643
No 170
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=93.11 E-value=0.6 Score=46.95 Aligned_cols=81 Identities=20% Similarity=0.222 Sum_probs=53.1
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHH---HHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI---CHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~---a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
+.+.-|++.+..+.+++.|++|+++|||....-... .++.|+... .. ++
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~----~~------------------------Li 194 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW----EK------------------------LI 194 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc----ce------------------------ee
Confidence 357788999999999999999999999986532222 234566431 01 22
Q ss_pred EecC--------hhhHHHHHHHHhhCCC-EEEEEcCCccCH
Q 003909 667 TRVE--------PSHKRMLVEALQNQNE-VVAMTGDGVNDA 698 (787)
Q Consensus 667 ~~~~--------p~~K~~~v~~l~~~~~-~v~~vGDg~ND~ 698 (787)
.|.. .+.|...-+.+.+.|. +++.+||..+|+
T Consensus 195 LR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 195 LKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred ecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 2211 1335454455555554 558899999998
No 171
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=92.60 E-value=0.8 Score=42.11 Aligned_cols=102 Identities=17% Similarity=0.120 Sum_probs=67.2
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHh-----CCCCCccccccccccch-hhccCChHHHHHhhc
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKI-----GAFDHLVDFVGRSYTAS-EFEELPAMQQTVALQ 661 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~---~a~~~-----gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 661 (787)
|..++++.+..++++++|++++-+|+|+...+.. ..++. ++..... .++.+ .+..+.++
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv-----~~sP~~l~~al~rE------- 93 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPV-----LLSPDSLFSALHRE------- 93 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCE-----EECCcchhhhhhcc-------
Confidence 5899999999999999999999999999766544 33433 3333211 01100 01111111
Q ss_pred cceEEEecChhhHHHHHHHHhhC-----CCEEEEEcCCccCHHHHhhCCce
Q 003909 662 HMALFTRVEPSHKRMLVEALQNQ-----NEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 662 ~~~v~~~~~p~~K~~~v~~l~~~-----~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
+..+...+.|...++.++.. ..-++++|...+|+.+-+.+|+.
T Consensus 94 ---vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 ---VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ---ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 33333446788888888754 34567789999999999888875
No 172
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.59 E-value=0.35 Score=48.75 Aligned_cols=93 Identities=11% Similarity=0.079 Sum_probs=57.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++-|++.+++++|++. +++.++|..+.. .+..|+..+.. .++...+.... .-.|
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd----~i~~~~~~~~~----------------KP~p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE----FVLRAGPHGRS----------------KPFS 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc----eeEecccCCcC----------------CCcH
Confidence 5778999999999975 899999986654 25566644321 11111111000 0112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCceEec
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIAM 710 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg-~ND~~ml~~A~vgia~ 710 (787)
+-=..+++.+.-..+.+++|||+ ..|+.+-+.||+-...
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 22233344444456789999999 5999999999986543
No 173
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=91.54 E-value=0.62 Score=46.49 Aligned_cols=98 Identities=15% Similarity=0.229 Sum_probs=66.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++.+++.+++++++++ ++++++|.-.........+++|+....- .++...+ .....
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd----~v~~s~~------------------~g~~K 154 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFD----AVFISED------------------VGVAK 154 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhh----eEEEecc------------------cccCC
Confidence 46788999999999999 9999999998888999999999765431 1111111 11122
Q ss_pred hhhH--HHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEecC
Q 003909 671 PSHK--RMLVEALQNQNEVVAMTGDGV-NDAPALKKADI-GIAMG 711 (787)
Q Consensus 671 p~~K--~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~v-gia~~ 711 (787)
|..+ ..+.+.+....+.+++|||+. ||+..-+.+|+ +|-+.
T Consensus 155 P~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 155 PDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred CCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 3222 344444544567899999976 67577788888 44454
No 174
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=91.37 E-value=1 Score=42.60 Aligned_cols=51 Identities=16% Similarity=0.216 Sum_probs=43.2
Q ss_pred EEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHhCCC
Q 003909 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAF 632 (787)
Q Consensus 582 ~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a---~~~gi~ 632 (787)
.+-|++..++..-|++.+|++.|+.++.+|..+|.-..++-+.+. +++|++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 467999999999999999999999999999999988777766655 456665
No 175
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=91.33 E-value=0.93 Score=40.21 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=29.5
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
+++.+++.+++++++++|++++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568899999999999999999999999987543
No 176
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=90.74 E-value=0.48 Score=48.13 Aligned_cols=42 Identities=7% Similarity=0.064 Sum_probs=39.3
Q ss_pred CC-hhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC
Q 003909 593 PR-EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (787)
Q Consensus 593 ~~-~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~ 634 (787)
+| |++.+++++|+++|++++++|+.....+....+++|+..+
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y 188 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY 188 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc
Confidence 55 9999999999999999999999999999999999999864
No 177
>PLN02151 trehalose-phosphatase
Probab=90.50 E-value=2.2 Score=45.06 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=35.8
Q ss_pred CcEEEEEeccCC--CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003909 580 DLTFIGLVGMLD--PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (787)
Q Consensus 580 ~l~~lG~i~~~d--~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~ 627 (787)
|++++-+..--+ .+.++++++|++|. ++..++++|||+......+..
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 555554433333 47899999999999 557999999999998887764
No 178
>PRK10444 UMP phosphatase; Provisional
Probab=90.09 E-value=0.3 Score=49.39 Aligned_cols=48 Identities=10% Similarity=0.218 Sum_probs=41.2
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh---CCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI---GAF 632 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~---gi~ 632 (787)
|++.-.+++-|++.+++++|+++|++++++|+++..+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 555566788999999999999999999999999999888877774 663
No 179
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=89.60 E-value=1.4 Score=45.67 Aligned_cols=49 Identities=12% Similarity=0.137 Sum_probs=36.5
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHhCCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKIGAFD 633 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~---~a~~~gi~~ 633 (787)
|++.-.+.+-|++.++|++|+++|++++++|+++..+... -.+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3344456778889999999999999999999987554444 345567643
No 180
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=87.93 E-value=0.56 Score=44.59 Aligned_cols=86 Identities=14% Similarity=0.236 Sum_probs=56.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++ +++++|.-+........+.+|+.... ..+++.++.... .-.|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~v~~~~~~~~~----------------KP~p 142 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF----DRAFSVDTVRAY----------------KPDP 142 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH----hhhccHhhcCCC----------------CCCH
Confidence 47889999998 37899999999999999999986542 112222211110 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A 704 (787)
+-=..+.+.+.-..+.+++|||+..|+.+-+++
T Consensus 143 ~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 143 VVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 322455566655667899999999999876543
No 181
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=87.18 E-value=3.2 Score=40.51 Aligned_cols=88 Identities=11% Similarity=0.151 Sum_probs=59.5
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHH----HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST----AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~----a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
-.+-|++.+.++...+.|.+|..+|.|..+. +..-.++.|+..... ...++
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~-------------------------~~~ll 175 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE-------------------------SHLLL 175 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc-------------------------cceEE
Confidence 3577999999999999999999999999886 344456667764210 00122
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 003909 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A 704 (787)
-+ .-..|..-.+.++..-..|+.|||..+|.......
T Consensus 176 kk-~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 176 KK-DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred ee-CCCcHHHHHHHHhhccceeeEecCchhhhcchhhh
Confidence 21 12334444444555677899999999998765443
No 182
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=85.89 E-value=3.2 Score=41.71 Aligned_cols=57 Identities=26% Similarity=0.330 Sum_probs=29.1
Q ss_pred hhhHHHHHHHHhhCC-------CEEEEEcCCccCHHHHhhC------CceEecCCcc-HHHHhhcCeeccC
Q 003909 671 PSHKRMLVEALQNQN-------EVVAMTGDGVNDAPALKKA------DIGIAMGSGT-AVAKSASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~-------~~v~~vGDg~ND~~ml~~A------~vgia~~~~~-~~~~~~ad~v~~~ 727 (787)
-..|...++.+-+.. ..++++||...|-.||+.. +++|-++... ......|+|-+.+
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 345888888776553 3688999999999999773 6677787443 4444556766554
No 183
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=85.86 E-value=1.7 Score=43.20 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=68.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc--cc-hhhccCChHHHHHhhccceEEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY--TA-SEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
-.+|+++.+.++.|++.+|.+.++|+.-......+.++.|...+.......-+ +. ..+..+... . +
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~-l--------I-- 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGP-L--------I-- 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS-------------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCC-c--------e--
Confidence 46899999999999999999999999999999999888876654322100000 00 000000000 0 0
Q ss_pred ecChhhHHH-------HHHHHhhCCCEEEEEcCCccCHHHHhhC---CceEecC--Ccc-----HHHHhhcCeeccCCCc
Q 003909 668 RVEPSHKRM-------LVEALQNQNEVVAMTGDGVNDAPALKKA---DIGIAMG--SGT-----AVAKSASDMVLADDNF 730 (787)
Q Consensus 668 ~~~p~~K~~-------~v~~l~~~~~~v~~vGDg~ND~~ml~~A---~vgia~~--~~~-----~~~~~~ad~v~~~~~~ 730 (787)
.+-.|-. .-+.++.+ ..|+..||+.-|+.|-.-. +.-+.+| |.. +.-+++-|+|+.++.-
T Consensus 158 --H~~NKn~~~l~~~~~~~~~~~R-~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~t 234 (246)
T PF05822_consen 158 --HTFNKNESALEDSPYFKQLKKR-TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQT 234 (246)
T ss_dssp ---TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B
T ss_pred --EEeeCCcccccCchHHHHhccC-CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCC
Confidence 0011111 12223333 4577779999999997555 3333344 332 2345578999987765
Q ss_pred hHHHHHH
Q 003909 731 ATIVAAV 737 (787)
Q Consensus 731 ~~i~~~i 737 (787)
-.++..|
T Consensus 235 m~v~~~i 241 (246)
T PF05822_consen 235 MDVPNAI 241 (246)
T ss_dssp -HHHHHH
T ss_pred chHHHHH
Confidence 5555443
No 184
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=85.15 E-value=1.1 Score=42.45 Aligned_cols=98 Identities=24% Similarity=0.301 Sum_probs=55.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh-----ccceEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL-----QHMALF 666 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~ 666 (787)
++.+++.+++.+|+++|++++++|.-+ |+-.. .++...+............ -....+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rg-------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRG-------YFTEADFDKLHNKMLKILASQGVKIDGILY 92 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCC-----------Ccccc-------CccHHHHHHHHHHHHHHHHHcCCccceEEE
Confidence 467899999999999999999999632 22110 0111111111000000000 011122
Q ss_pred EecChh--------hHHHHHHHHhhC---CCEEEEEcCCccCHHHHhhCCce
Q 003909 667 TRVEPS--------HKRMLVEALQNQ---NEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 667 ~~~~p~--------~K~~~v~~l~~~---~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
|--.|+ ....+.+.+++. .....+|||...|+.+-..|++.
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 222222 234445555544 46789999999999999999986
No 185
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=84.87 E-value=2.2 Score=43.62 Aligned_cols=41 Identities=7% Similarity=-0.042 Sum_probs=38.0
Q ss_pred ChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC
Q 003909 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (787)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~ 634 (787)
.|++.+++++|+++|++++++|+.+...+....+.+|+..+
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 49999999999999999999998888899999999999764
No 186
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=84.85 E-value=0.88 Score=42.69 Aligned_cols=98 Identities=10% Similarity=0.069 Sum_probs=62.6
Q ss_pred cCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+.=..||++.+.+++|.+. +.+++.|......|..+.+.++....... ..+..+.. ...
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~---~~l~r~~~----------------~~~- 97 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS---RRLYRESC----------------VFT- 97 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe---EEEEcccc----------------EEe-
Confidence 3346899999999999988 99999999999999999999987541110 00000000 000
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
.+. -.+-+..+......|++|||...|..+-+.+++-|.
T Consensus 98 -~~~-~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 98 -NGK-YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred -CCC-EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 011 001122233445688999999988877666655544
No 187
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=84.80 E-value=2.2 Score=47.87 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=33.5
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCH------------HHHHHHHHHhCCC
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNK------------STAESICHKIGAF 632 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~------------~~a~~~a~~~gi~ 632 (787)
+-|++.++|++|+++|++++|+|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998665 3466778888874
No 188
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=83.61 E-value=5.3 Score=42.18 Aligned_cols=107 Identities=13% Similarity=0.128 Sum_probs=68.0
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh-C-------CCCCccccccccccchh----------hccCCh-
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI-G-------AFDHLVDFVGRSYTASE----------FEELPA- 653 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~-g-------i~~~~~~~~~~~~~~~~----------~~~~~~- 653 (787)
..|++.+.+++|+++|+++.++|+-+...+..+.+.+ | +.... +.++.+.. +..+..
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yF----D~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYF----DVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhC----cEEEeCCCCCcccCCCCceEEEeCC
Confidence 3789999999999999999999999999999999996 6 33322 11221111 000000
Q ss_pred --HHH-H--HhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHh-hCCc
Q 003909 654 --MQQ-T--VALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALK-KADI 706 (787)
Q Consensus 654 --~~~-~--~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~-~A~v 706 (787)
... . ..+....||+.-+- ..+.+.+...+..|++|||.. .|+-.-+ .+|+
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred CCcccCCccccccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 000 0 00122335554433 345566667789999999986 5888776 6776
No 189
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=81.03 E-value=57 Score=40.80 Aligned_cols=21 Identities=24% Similarity=0.389 Sum_probs=14.3
Q ss_pred CCeEEEee--cCCCCCCcEEEec
Q 003909 131 NGCFSILP--AAELVPGDIVEVN 151 (787)
Q Consensus 131 ~g~~~~i~--~~~Lv~GDII~l~ 151 (787)
-|..+.+. ..+.+|.|.+.++
T Consensus 249 pGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 249 PGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred CCCEEEEecCCCCEecceEEEEe
Confidence 45666666 6777777777764
No 190
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=79.92 E-value=1.7 Score=34.62 Aligned_cols=57 Identities=25% Similarity=0.263 Sum_probs=38.4
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCc-eEecCC---ccHHHH---hhcCeeccC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADI-GIAMGS---GTAVAK---SASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg-~ND~~ml~~A~v-gia~~~---~~~~~~---~~ad~v~~~ 727 (787)
|.--..+.+.+......++||||. ..|+.+-+.+|+ +|.+.. ..+... ..+|+|+.+
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 333445556665556789999999 999999999998 444432 223332 467888754
No 191
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=79.17 E-value=5.5 Score=37.39 Aligned_cols=97 Identities=14% Similarity=0.192 Sum_probs=53.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEc-CCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVT-GDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~T-Gd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+-|++.++|+.|++.|+++.++| -+.+.-|+.+.+.+++...... .. . ....--+...-
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~----~~---~------------~~~~F~~~eI~ 105 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGD----GV---P------------LIEYFDYLEIY 105 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-----------------------------CCECEEEES
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccc----cc---c------------chhhcchhhee
Confidence 477999999999999999999999 4778899999999999821100 00 0 00000123344
Q ss_pred hhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEe
Q 003909 671 PSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 671 p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
|..|..-.+.+++. -+.+++|=|........+. +||.
T Consensus 106 ~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~--lGV~ 146 (169)
T PF12689_consen 106 PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK--LGVT 146 (169)
T ss_dssp SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHT--TT-E
T ss_pred cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEe--cCcE
Confidence 55666666655543 3457777776555544443 4544
No 192
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=78.14 E-value=2.8 Score=42.57 Aligned_cols=46 Identities=17% Similarity=0.211 Sum_probs=39.4
Q ss_pred EEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh
Q 003909 584 IGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI 629 (787)
Q Consensus 584 lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~ 629 (787)
=|++.-.+++=|++.++|++|+++|++++++|..+..+...+++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4777788999999999999999999999999998888877555443
No 193
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=77.52 E-value=13 Score=37.71 Aligned_cols=42 Identities=12% Similarity=0.168 Sum_probs=34.2
Q ss_pred cCCCCChhHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHhC
Q 003909 589 MLDPPREEVKNAMLSCMTA-GIRVIVVTGDNKSTAESICHKIG 630 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~~a~~~g 630 (787)
....+.++..+.+++|... ...++|+|||+.........-.|
T Consensus 37 ~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~ 79 (266)
T COG1877 37 EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPG 79 (266)
T ss_pred cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCC
Confidence 3446889999999999988 44799999999999888776333
No 194
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=76.99 E-value=8.5 Score=38.17 Aligned_cols=108 Identities=11% Similarity=0.029 Sum_probs=68.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++-++..+++++||++|..+.++|-=.... +.+-..+|+..+.- ..+.+...- -..
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~fD---~vv~S~e~g-------------------~~K 168 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYFD---FVVESCEVG-------------------LEK 168 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhhh---hhhhhhhhc-------------------cCC
Confidence 3455667799999999998888888655443 36666666653210 001111100 022
Q ss_pred hhh--HHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCc-eEecCCccHHHHhhc
Q 003909 671 PSH--KRMLVEALQNQNEVVAMTGDG-VNDAPALKKADI-GIAMGSGTAVAKSAS 721 (787)
Q Consensus 671 p~~--K~~~v~~l~~~~~~v~~vGDg-~ND~~ml~~A~v-gia~~~~~~~~~~~a 721 (787)
|+- =...++.+....+.++++||. .||+..-+.+|. ++-+.|+....++..
T Consensus 169 PDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~ 223 (237)
T KOG3085|consen 169 PDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELE 223 (237)
T ss_pred CChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhh
Confidence 322 245566666778899999995 599999999998 556666666555543
No 195
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=74.04 E-value=15 Score=37.96 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=54.2
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhc-cceEEEecCh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQ-HMALFTRVEP 671 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~p 671 (787)
--++..++++.|+++|+ ..++|........ .. +..... .+..+..+ ..... .......-+|
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~--~~--~~~~~~--------~g~~~~~i-----~~~~g~~~~~~gKP~p 205 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPL--SD--GSRTPG--------TGSLVAAI-----ETASGRQPLVVGKPSP 205 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCC--cC--CCcccC--------hHHHHHHH-----HHHhCCceeccCCCCH
Confidence 47789999999999998 6778776542210 00 110000 00000000 00000 0001122334
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCce-EecC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIG-IAMG 711 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg-~ND~~ml~~A~vg-ia~~ 711 (787)
+-=..+++.+....+.++||||. ..|+.+-+.||+- |.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~ 247 (279)
T TIGR01452 206 YMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVL 247 (279)
T ss_pred HHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEEC
Confidence 33344555555556889999999 5999999999984 4443
No 196
>PLN03190 aminophospholipid translocase; Provisional
Probab=73.95 E-value=70 Score=40.29 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=62.4
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC
Q 003909 52 LVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN 131 (787)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~ 131 (787)
++++.+...+..+..+..++..++.+++.-.....+...+.+++++++.. .++.++++++++.+... +
T Consensus 102 FlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~---------ike~~Ed~~r~k~d~~~---N 169 (1178)
T PLN03190 102 FLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTA---------VKDAYEDWRRHRSDRIE---N 169 (1178)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHH---------HHHHHHHHHHHHhHHhh---c
Confidence 46677777778888888777777777654444333444454545544444 34567777666665432 3
Q ss_pred CeEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 132 GCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 132 g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
.+...+ +.-|....+...+..|-|.+.+.
T Consensus 170 ~~~~~v----~~~~~~~~i~~~~i~vGDiv~v~ 198 (1178)
T PLN03190 170 NRLAWV----LVDDQFQEKKWKDIRVGEIIKIQ 198 (1178)
T ss_pred CcEEEE----EECCeEEEEeHHHCCCCCEEEEC
Confidence 333333 24578889999999999999995
No 197
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=70.85 E-value=21 Score=37.71 Aligned_cols=49 Identities=20% Similarity=0.179 Sum_probs=38.7
Q ss_pred EEeccCCCCChhHHHHHHHHHhC----CCEEEEEcCCC---HHH-HHHHHHHhCCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTA----GIRVIVVTGDN---KST-AESICHKIGAFD 633 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~----gi~v~i~TGd~---~~~-a~~~a~~~gi~~ 633 (787)
|++.-.+++-+++.++++.|+.. |+++.++|... ... +..+.+++|+.-
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 66677788999999999999998 99999998554 443 455567888753
No 198
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=67.71 E-value=9.8 Score=38.18 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=37.7
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHH-hCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHK-IGAF 632 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~~a~~-~gi~ 632 (787)
|++.-.+.+-|++.++|+.++++|++++++| |++.........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4455556778899999999999999999998 7777776655555 7764
No 199
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=66.83 E-value=5.3 Score=40.26 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=53.3
Q ss_pred ChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhh
Q 003909 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (787)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 673 (787)
-++..++++.++++|++. ++|+.....+.......|.-.. +.. +...-.+......-.|+-
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~-------------~~~-----i~~~g~~~~~~gKP~~~~ 200 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYY-------------AEL-----IKQLGGKVIYSGKPYPAI 200 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHH-------------HHH-----HHHhCCcEecCCCCCHHH
Confidence 578999999999999997 7788766554332222221110 000 000000000112223332
Q ss_pred HHHHHHHHhhC-CCEEEEEcCC-ccCHHHHhhCCceE
Q 003909 674 KRMLVEALQNQ-NEVVAMTGDG-VNDAPALKKADIGI 708 (787)
Q Consensus 674 K~~~v~~l~~~-~~~v~~vGDg-~ND~~ml~~A~vgi 708 (787)
=..+.+.+... .+.++||||+ .+|+.+-+.||+-.
T Consensus 201 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 201 FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 23444444322 4579999999 59999999999854
No 200
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=65.23 E-value=77 Score=39.12 Aligned_cols=62 Identities=18% Similarity=0.194 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeeE-E----EeCCeEEEeecCCCCCCcEEEecC
Q 003909 91 SVILLILAANAAVGVITETNAEKALEELRAYQ-----ADIAT-V----LRNGCFSILPAAELVPGDIVEVNV 152 (787)
Q Consensus 91 ~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~-----~~~~~-v----~r~g~~~~i~~~~Lv~GDII~l~~ 152 (787)
+++++.++++.+-+...++..++..+...+.. ..+.. + +.-|..+.+...+.+|.|.+.++.
T Consensus 136 ~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 136 VSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 34444455555555555554444333232211 11222 2 246889999999999999999964
No 201
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.66 E-value=32 Score=35.67 Aligned_cols=44 Identities=14% Similarity=0.247 Sum_probs=30.8
Q ss_pred CCCChhHHHHHHHHHhCCCE---EEEEcCCCHHHHHH------HHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~~------~a~~~gi~~~ 634 (787)
++++.+.++.+++++++|++ .++.-|+++.+..+ .|+++|+...
T Consensus 14 ~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 66 (301)
T PRK14194 14 ARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSL 66 (301)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 46778888888888888775 35566777765433 5777887653
No 202
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=60.22 E-value=1.6e+02 Score=36.88 Aligned_cols=95 Identities=18% Similarity=0.159 Sum_probs=58.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCe
Q 003909 54 LKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC 133 (787)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~ 133 (787)
++.|...+..+..+..++..++.+++ .... ..+...++-+++...+ ...++.++++++++.+... +.+
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip---~~s~-~~~~t~~~pL~~v~~~-----~~~~~~~ed~~r~~~d~~~---n~~ 85 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVP---ILSP-TYRGTSIVPLAFVLIV-----TAIKEAIEDIRRRRRDKEV---NNR 85 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCC---CcCC-CCccHhHHhHHHHHHH-----HHHHHHHHHHHHHHhHHHH---hCc
Confidence 67777888888877777766665552 1121 2233333333332222 3467788888888776431 222
Q ss_pred EEEeecCCCCC-CcEEEecCCCccccceeeee
Q 003909 134 FSILPAAELVP-GDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 134 ~~~i~~~~Lv~-GDII~l~~G~~vPaD~~il~ 164 (787)
...| +.. |....+...|..|-|.++++
T Consensus 86 ~~~v----~~~~~~~~~i~~~~l~~GDiv~l~ 113 (1057)
T TIGR01652 86 LTEV----LEGHGQFVEIPWKDLRVGDIVKVK 113 (1057)
T ss_pred EEEE----ECCCCcEEEeeeecccCCCEEEEc
Confidence 2222 232 67889999999999999995
No 203
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=60.00 E-value=37 Score=32.18 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=69.3
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCHHH-HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhh
Q 003909 595 EEVKNAMLSCMTAGIRVIVVTGDNKST-AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (787)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~i~TGd~~~~-a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 673 (787)
-+..++++++++.|-++.+++=++... ...+.+.+|+.-. .+.-.++++
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~------------------------------~~~~~~~~e 113 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIK------------------------------IYPYDSEEE 113 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEE------------------------------EEEESSHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceE------------------------------EEEECCHHH
Confidence 456777777777777888777766664 6777787877421 444466788
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHH
Q 003909 674 KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749 (787)
Q Consensus 674 K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~ 749 (787)
-...++.++..|-.+.. |++.- ..+.+..|+ ..+....+.+++..++.+++.+.+..++
T Consensus 114 ~~~~i~~~~~~G~~viV-Gg~~~-~~~A~~~gl---------------~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 114 IEAAIKQAKAEGVDVIV-GGGVV-CRLARKLGL---------------PGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHHTT--EEE-ESHHH-HHHHHHTTS---------------EEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEE-CCHHH-HHHHHHcCC---------------cEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 88889999888855554 87632 222233332 3445555688889999999988876653
No 204
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=59.93 E-value=1.9e+02 Score=35.50 Aligned_cols=277 Identities=14% Similarity=0.057 Sum_probs=130.6
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCC
Q 003909 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETG 83 (787)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (787)
++-++-+|..+++.....+.+.+++...... .|++.+..-|...+.....+.+++.......... .
T Consensus 42 ~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~-------------~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~-~ 107 (917)
T COG0474 42 TTGLSEEEVKRRLKKYGPNELPEEKKRSLLK-------------KFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDA-I 107 (917)
T ss_pred ccCCCHHHHHHHHhhcCCccccccccCcHHH-------------HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcce-e
Confidence 4456667888888744444443322222222 2444444444444444444444443321100000 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------eeEE----EeCCeEEEeecCCCCCCcEEEecCC
Q 003909 84 LTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQAD------IATV----LRNGCFSILPAAELVPGDIVEVNVG 153 (787)
Q Consensus 84 ~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~------~~~v----~r~g~~~~i~~~~Lv~GDII~l~~G 153 (787)
..+.++++..+..+...+...++-++++++...... ...+ +.-|..+.+...|.+|-|..+++..
T Consensus 108 -----~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~ 182 (917)
T COG0474 108 -----VILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESS 182 (917)
T ss_pred -----eehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEec
Confidence 012334444444467778887777777777554432 1222 3568899999999999999999887
Q ss_pred CccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHH
Q 003909 154 CKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIR 233 (787)
Q Consensus 154 ~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~ 233 (787)
+ .-+|=-.|.|++.-..=+....+++..|.... .....-.+..+..|.-..--...|.-+..|+.+..-.-.
T Consensus 183 ~-l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d-------~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~ 254 (917)
T COG0474 183 D-LEVDESALTGESLPVEKQALPLTKSDAPLGLD-------RDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254 (917)
T ss_pred C-ceEEcccccCCCcchhccccccccccccccCC-------ccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccc
Confidence 6 44444444433321111111122233333211 112223355677777444334445555555544332211
Q ss_pred HHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHH
Q 003909 234 DSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIG-HFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVT 312 (787)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~ 312 (787)
+ .....-...+.+....+....+...+++.++.++.... +. ..++..+..+++++=-.+|..+.++..
T Consensus 255 ~--~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~v~l~va~IPegLp~~vti~la 323 (917)
T COG0474 255 K--EVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLL---------ESFLTALALAVAAVPEGLPAVVTIALA 323 (917)
T ss_pred c--ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHH---------HHHHHHHHHHHhccccchHHHHHHHHH
Confidence 1 11111112233333333333333333333333222011 11 123345566677777778887777776
Q ss_pred HHHHHH
Q 003909 313 TCLALG 318 (787)
Q Consensus 313 ~~~~~~ 318 (787)
++...=
T Consensus 324 ~g~~~m 329 (917)
T COG0474 324 LGAQRM 329 (917)
T ss_pred HHHHHH
Confidence 665443
No 205
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=57.06 E-value=1.4e+02 Score=26.49 Aligned_cols=85 Identities=18% Similarity=0.231 Sum_probs=50.5
Q ss_pred cCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+-+++.++..+.+++ |+.+.+.............+.... ++..
T Consensus 3 i~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~~d~---------------------------------ii~~ 45 (133)
T PF00389_consen 3 ITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKDADA---------------------------------IIVG 45 (133)
T ss_dssp ESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTTESE---------------------------------EEES
T ss_pred EeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCCCeE---------------------------------EEEc
Confidence 345666766666665 778888885555544333333221 3333
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcc--CHHHHhhCCceEecC
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVN--DAPALKKADIGIAMG 711 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~N--D~~ml~~A~vgia~~ 711 (787)
..+.-..++++.+ ..-+-+...|-|.+ |+++++.-|+-|+=.
T Consensus 46 ~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 46 SGTPLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp TTSTBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred CCCCcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 3332234556666 44567788888888 899999999988854
No 206
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=56.66 E-value=3.3e+02 Score=33.57 Aligned_cols=214 Identities=12% Similarity=0.034 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeeEE-----EeCCeEEEeecCCCCCCcEEEecCCCccccceee
Q 003909 93 ILLILAANAAVGVITETNAEKALEELRAYQA-----DIATV-----LRNGCFSILPAAELVPGDIVEVNVGCKIPADMRM 162 (787)
Q Consensus 93 il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-----~~~~v-----~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~i 162 (787)
+++...++ .+..+...+.-+.+.++..... .+... +.-|....+...+.+|-|.+.++..+ +=+|=-.
T Consensus 46 i~~~~~i~-~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~-l~VdeS~ 123 (917)
T TIGR01116 46 LVANAIVG-VWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT-LRVDQSI 123 (917)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc-eEEEccc
Confidence 33334444 4444555555555666643322 11112 24688999999999999999997652 2234333
Q ss_pred eeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccC-CC
Q 003909 163 IEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT-ED 241 (787)
Q Consensus 163 l~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~-~~ 241 (787)
|.|++..+.-......++..+.. ......-.+..+..|....-=...|.=+..|. +.+..+..... ..
T Consensus 124 LTGES~pv~K~~~~~~~~~~~~~--------~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gk---i~~~~~~~~~~~t~ 192 (917)
T TIGR01116 124 LTGESVSVNKHTESVPDERAVNQ--------DKKNMLFSGTLVVAGKARGVVVRTGMSTEIGK---IRDEMRAAEQEDTP 192 (917)
T ss_pred ccCCCCcccccccccCccccCcc--------cccceeeeCCEEecceEEEEEEEeCCCCHHHH---HHHHhhccCCCCCC
Confidence 43333222111111111111100 01122233556667764432223333334442 11222222221 11
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 003909 242 EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIG-HFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (787)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~ 319 (787)
-...+.+....+......+.+++.++.+..+.. .....+...+...+...+..+++..=.++|..+++++..+...-.
T Consensus 193 lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~ 271 (917)
T TIGR01116 193 LQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA 271 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHH
Confidence 223344444445444333332222222111110 011111122333343444556666667888888887777765543
No 207
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=54.42 E-value=60 Score=32.05 Aligned_cols=116 Identities=12% Similarity=0.077 Sum_probs=73.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhC-CCCCccccccccc-cchhhccCChHHHHHhhccceEEEec
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG-AFDHLVDFVGRSY-TASEFEELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~g-i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~ 669 (787)
.+.||+.+.++.|+..|+.+.++|+.+..+...-....+ +.... ...+. ++.+...- ..
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f---~~~v~~d~~~v~~g----------------KP 152 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNF---SHVVLGDDPEVKNG----------------KP 152 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhc---CCCeecCCccccCC----------------CC
Confidence 456699999999999999999999997777655444443 22110 01111 11111111 13
Q ss_pred ChhhHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCCceEecC-C--ccHHHHhhcCeecc
Q 003909 670 EPSHKRMLVEALQNQN-EVVAMTGDGVNDAPALKKADIGIAMG-S--GTAVAKSASDMVLA 726 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~-~~v~~vGDg~ND~~ml~~A~vgia~~-~--~~~~~~~~ad~v~~ 726 (787)
.|+-=....+.+.... ..++++.|..+=+.|-++||.-+-|- + -.....+.+++++.
T Consensus 153 ~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~ 213 (222)
T KOG2914|consen 153 DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILE 213 (222)
T ss_pred CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecc
Confidence 3444455666666666 88999999999999999999876553 2 33444445555553
No 208
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=53.71 E-value=1e+02 Score=30.47 Aligned_cols=167 Identities=18% Similarity=0.209 Sum_probs=74.0
Q ss_pred CcEEEecCCCccccceeeeeecCCceEEeccccc-CCccccccccccccccccCCCCCC-ceEeeccEEecceEE--EEE
Q 003909 145 GDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILT-GESCSVEKELDSIIATNAVYQDKT-NILFSGTVVVAGRAR--AVV 220 (787)
Q Consensus 145 GDII~l~~G~~vPaD~~il~~~~g~~~vdes~lt-GEs~pv~k~~~~~~~~~~~~~~~~-~~l~~Gt~v~~g~~~--~~V 220 (787)
|....+...+.+|-|.+.+. .+..+-+|=-.+. |...- . .....+ ...+..+. .....|..+..|... +.+
T Consensus 42 ~~~~~i~~~~L~~GDiI~l~-~g~~vPaD~~ll~~g~~~v-d--~s~ltG-es~pv~k~~~~~~~~~~i~~Gs~v~~g~~ 116 (230)
T PF00122_consen 42 GRWQKIPSSELVPGDIIILK-AGDIVPADGILLESGSAYV-D--ESALTG-ESEPVKKTPLPLNPGNIIFAGSIVVSGWG 116 (230)
T ss_dssp TEEEEEEGGGT-TTSEEEEE-TTEBESSEEEEEESSEEEE-E--CHHHHS-BSSEEEESSSCCCTTTEE-TTEEEEEEEE
T ss_pred cccccchHhhccceeeeecc-cccccccCccceecccccc-c--cccccc-cccccccccccccccchhhcccccccccc
Confidence 68888888888888988885 2222334444443 32211 1 000000 00000000 012267777777644 334
Q ss_pred EEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHH
Q 003909 221 VGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300 (787)
Q Consensus 221 ~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 300 (787)
......|........+.+...........+++....+....+.+.++..++.+... +.......+...+...+
T Consensus 117 ~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i 189 (230)
T PF00122_consen 117 IGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIW-------FFNDSGISFFKSFLFAI 189 (230)
T ss_dssp EEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHC-------HTGSTTCHCCHHHHHHH
T ss_pred ccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccc-------eeccccccccccccccc
Confidence 44445555544444444433333333345566655555555444444433322111 00001122233444445
Q ss_pred HhcCCchHHHHHHHHHHHHHHhh
Q 003909 301 AAIPEGLPAVVTTCLALGTKRMA 323 (787)
Q Consensus 301 ~~~P~~l~~~~~~~~~~~~~~l~ 323 (787)
..+=...|.+++++...+.....
T Consensus 190 ~~l~~~~P~~l~~~~~~~~~~~~ 212 (230)
T PF00122_consen 190 SLLIVLIPCALPLALPLSLAIAA 212 (230)
T ss_dssp HHHHHHS-TTHHHHHHHHHHHHH
T ss_pred ceeeeecccceeehHHHHHHHHH
Confidence 55555667777777666655543
No 209
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=53.60 E-value=21 Score=39.36 Aligned_cols=109 Identities=14% Similarity=0.103 Sum_probs=58.4
Q ss_pred ChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC------Cccccccccccchh----hc------cC------
Q 003909 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD------HLVDFVGRSYTASE----FE------EL------ 651 (787)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~------~~~~~~~~~~~~~~----~~------~~------ 651 (787)
.|+.+..+++||++|.++.++|+-+..-+..+++-+ +.. .+-++.+.++.+.. +. .+
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl-~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~ 263 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYL-LGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGK 263 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHH-CGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSS
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhc-cCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCc
Confidence 468999999999999999999999999998887765 333 33333333332211 00 00
Q ss_pred -ChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhC-Cc
Q 003909 652 -PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKA-DI 706 (787)
Q Consensus 652 -~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A-~v 706 (787)
........+....||+.-+-. .+.+.+...|..|+.|||.. .|+---+.. +.
T Consensus 264 l~~~~~~~~l~~g~vY~gGn~~---~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gW 318 (448)
T PF05761_consen 264 LKWGKYVGPLEKGKVYSGGNWD---QLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGW 318 (448)
T ss_dssp EECS---SS--TC-EEEE--HH---HHHHHCT--GGGEEEEESSTTTTHHHHHHHH-S
T ss_pred cccccccccccCCCEeecCCHH---HHHHHHccCCCeEEEECCchhhhhhhhccccce
Confidence 000001122234466665544 33344455688999999987 588766554 44
No 210
>PTZ00445 p36-lilke protein; Provisional
Probab=53.41 E-value=43 Score=32.56 Aligned_cols=30 Identities=20% Similarity=0.114 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKST 621 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~ 621 (787)
.++|+.+..+++|+++||+++++|=.....
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 479999999999999999999999766644
No 211
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=53.24 E-value=78 Score=32.84 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=33.9
Q ss_pred EEecChhhHHHHHHHHhh--CCCEEEEEcCCcc-C---HHHHhhCCceEecCC----ccHHHHhhcCeecc
Q 003909 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN-D---APALKKADIGIAMGS----GTAVAKSASDMVLA 726 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~--~~~~v~~vGDg~N-D---~~ml~~A~vgia~~~----~~~~~~~~ad~v~~ 726 (787)
|.=|+|..=.++++...- .|..|+++|-+.. = +.+|..+|..|.+-+ ..+.+...||+|+.
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 344666555555554432 3888888884332 2 334566677666542 22344456777764
No 212
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=53.21 E-value=6.7 Score=31.67 Aligned_cols=23 Identities=30% Similarity=0.424 Sum_probs=17.1
Q ss_pred EeecCCCCCCcEEEe-cCCCcccc
Q 003909 136 ILPAAELVPGDIVEV-NVGCKIPA 158 (787)
Q Consensus 136 ~i~~~~Lv~GDII~l-~~G~~vPa 158 (787)
.+...+|.+||.|.+ ++||.||-
T Consensus 44 ~i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 44 YIKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHHcCCCCCCEEEEEECCCccce
Confidence 344567999998888 89999996
No 213
>PRK10444 UMP phosphatase; Provisional
Probab=53.15 E-value=1.4e+02 Score=30.19 Aligned_cols=42 Identities=24% Similarity=0.265 Sum_probs=29.6
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce-EecC
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG-IAMG 711 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vg-ia~~ 711 (787)
.|+--..+++.+....+.++||||.. +|+.+-+.+|+- +.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~ 219 (248)
T PRK10444 176 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVL 219 (248)
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEEC
Confidence 34333444555555577899999997 899999999994 4443
No 214
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=51.87 E-value=4.6e+02 Score=32.74 Aligned_cols=76 Identities=9% Similarity=0.084 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeeEE-----EeCCeEEEeecCCCCCCcEEEecCCCccccc
Q 003909 90 PSVILLILAANAAVGVITETNAEKALEELRAYQ-----ADIATV-----LRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (787)
Q Consensus 90 ~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~-----~~~~~v-----~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD 159 (787)
.++++++..+..+...+...+.-+.+.++.... ..+... +.-|..+.+...+.+|.|.+.++... +=+|
T Consensus 110 i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~Vd 188 (997)
T TIGR01106 110 LSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVD 188 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEE
Confidence 445555555555666666776666677663221 111112 25688999999999999999998652 3345
Q ss_pred eeeeeec
Q 003909 160 MRMIEML 166 (787)
Q Consensus 160 ~~il~~~ 166 (787)
=-.|.|+
T Consensus 189 eS~LTGE 195 (997)
T TIGR01106 189 NSSLTGE 195 (997)
T ss_pred ccccCCC
Confidence 4444433
No 215
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=51.38 E-value=2.2e+02 Score=35.01 Aligned_cols=72 Identities=18% Similarity=0.148 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeeEEE-----eCCeEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 95 LILAANAAVGVITETNAEKALEELRAYQA-----DIATVL-----RNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 95 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-----~~~~v~-----r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
++..+..++..+...++-+.+.++..... .....+ .-|....+...+.+|-|.+.++..+ .=+|=-.+.
T Consensus 91 ~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~-l~VDES~LT 169 (884)
T TIGR01522 91 LIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD-LSIDESNLT 169 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc-eEEEccccc
Confidence 33344444566666677767777743322 122222 3588999999999999999997532 224544444
Q ss_pred ecC
Q 003909 165 MLS 167 (787)
Q Consensus 165 ~~~ 167 (787)
|++
T Consensus 170 GES 172 (884)
T TIGR01522 170 GET 172 (884)
T ss_pred CCC
Confidence 333
No 216
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.10 E-value=88 Score=32.39 Aligned_cols=44 Identities=16% Similarity=0.326 Sum_probs=30.0
Q ss_pred CCCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHHHH------HHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTAES------ICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a~~------~a~~~gi~~~ 634 (787)
++++.+.++.++.++++ |++ .++..|+++.+..+ .|+++|+...
T Consensus 11 ~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (295)
T PRK14174 11 LDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNST 64 (295)
T ss_pred HHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEE
Confidence 45677788888888776 554 46677777765433 5777887654
No 217
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=50.20 E-value=3.6e+02 Score=32.42 Aligned_cols=107 Identities=19% Similarity=0.138 Sum_probs=58.8
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---
Q 003909 47 TAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQA--- 123 (787)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~--- 123 (787)
..|++.|+.-|.-.+....++..++.-.. .. ....+++++.....++..+...++.+.+.++.....
T Consensus 28 ~~~~~~~~~~~~~lL~~aa~~s~~~~~~~---------~~-~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~ 97 (755)
T TIGR01647 28 LKFLGFFWNPLSWVMEAAAIIAIALENWV---------DF-VIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVL 97 (755)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhhcchh---------hh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 45666666666544444344443433222 01 112234444444455677777777777777643221
Q ss_pred --Ce-eEE----EeCCeEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 124 --DI-ATV----LRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 124 --~~-~~v----~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
.+ ..+ +.-|..+.+...+.+|-|-+.++. +-.-+|=-.+.
T Consensus 98 Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g-~~~~VDeS~LT 144 (755)
T TIGR01647 98 RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEG-DYIQVDQAALT 144 (755)
T ss_pred ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEec-CceEEEccccc
Confidence 12 112 346889999999999999988853 32333444443
No 218
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.18 E-value=77 Score=32.55 Aligned_cols=45 Identities=20% Similarity=0.324 Sum_probs=32.8
Q ss_pred CCCChhHHHHHHHHHhCCCE---EEEEcCCCHHHHHH------HHHHhCCCCCc
Q 003909 591 DPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDHL 635 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~~------~a~~~gi~~~~ 635 (787)
++++++.++.++.|+++|++ .++..|+++.+..+ .|+++|+....
T Consensus 12 ~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 65 (284)
T PRK14170 12 KEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVL 65 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45778888889999888875 56777888776544 57888887543
No 219
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=48.90 E-value=26 Score=32.55 Aligned_cols=42 Identities=14% Similarity=0.069 Sum_probs=38.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD 633 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~ 633 (787)
-.+||++.+.+++|++. ++++++|.-....|..+.+.++...
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 35899999999999955 9999999999999999999998764
No 220
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=47.56 E-value=5.5e+02 Score=31.41 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------------CeeEE----EeCCeEEEeecCCCCCCcEEEecCCC
Q 003909 91 SVILLILAANAAVGVITETNAEKALEELRAYQA------------DIATV----LRNGCFSILPAAELVPGDIVEVNVGC 154 (787)
Q Consensus 91 ~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~------------~~~~v----~r~g~~~~i~~~~Lv~GDII~l~~G~ 154 (787)
+++++..+++.+.+... .++-++++++..... ....+ +.-|....+...+.+|-|.+.++. .
T Consensus 96 ~iv~~~~~i~~~~e~~a-~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g-~ 173 (867)
T TIGR01524 96 LMVLASGLLGFIQESRA-ERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISA-R 173 (867)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEec-C
Confidence 33444444555555444 467767777743321 11122 246889999999999999988874 3
Q ss_pred ccccceeeeeecC
Q 003909 155 KIPADMRMIEMLS 167 (787)
Q Consensus 155 ~vPaD~~il~~~~ 167 (787)
-+=+|=-.|.|++
T Consensus 174 ~l~VDES~LTGES 186 (867)
T TIGR01524 174 DLFINQSALTGES 186 (867)
T ss_pred ceEEEcccccCCC
Confidence 3444544454433
No 221
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=46.20 E-value=6.5e+02 Score=30.96 Aligned_cols=206 Identities=14% Similarity=0.065 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----C-------e-eEE----EeCCeEEEeecCCCCCCcEEEecC
Q 003909 89 EPSVILLILAANAAVGVITETNAEKALEELRAYQA----D-------I-ATV----LRNGCFSILPAAELVPGDIVEVNV 152 (787)
Q Consensus 89 ~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~----~-------~-~~v----~r~g~~~~i~~~~Lv~GDII~l~~ 152 (787)
..++++++..+..++..+...++.++++++..... + . ..+ +.-|..+.+...+.+|-|.+.++.
T Consensus 116 iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g 195 (903)
T PRK15122 116 IILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIES 195 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc
Confidence 34445555555666777777777777877743221 1 1 222 246889999999999999998874
Q ss_pred CCccccceeeeeecCCceEEec--c--------cccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEE
Q 003909 153 GCKIPADMRMIEMLSNQLRVDQ--A--------ILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVG 222 (787)
Q Consensus 153 G~~vPaD~~il~~~~g~~~vde--s--------~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~ 222 (787)
. -+=+|=-.|.|++-.+.-.. . ...++..+..- .....-.+..+..|+...-=...|.=+.
T Consensus 196 ~-~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~--------~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 196 R-DLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLD--------LPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred C-ceEEEccccCCCCcceeeeccccccccccccccccccCCccc--------ccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 3 23445444444333222221 0 01122211110 1111223556777765443222233333
Q ss_pred ecchhhhhHHHHHhcc-C--CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHH
Q 003909 223 VGANTAMGSIRDSMLQ-T--EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALA 299 (787)
Q Consensus 223 tg~~T~~~~i~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 299 (787)
.|.=. ++...-.. + +++-.++.+.+..++.++++++++++.+... .+. ..+...+..+++..
T Consensus 267 ~gkI~---~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~---~~~---------~~l~~aisl~V~~~ 331 (903)
T PRK15122 267 FGSLA---KSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG---DWL---------EALLFALAVAVGLT 331 (903)
T ss_pred hhHHH---HHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC---CHH---------HHHHHHHHHHHHHc
Confidence 33211 11111111 1 1112345666677776666666555443211 111 12223445566666
Q ss_pred HHhcCCchHHHHHHHHHHH
Q 003909 300 VAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 300 ~~~~P~~l~~~~~~~~~~~ 318 (787)
-.++|..+++++..+....
T Consensus 332 Pe~Lp~~vt~~La~g~~~m 350 (903)
T PRK15122 332 PEMLPMIVSSNLAKGAIAM 350 (903)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 6778888888777765443
No 222
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.67 E-value=1.1e+02 Score=31.32 Aligned_cols=45 Identities=11% Similarity=0.217 Sum_probs=31.6
Q ss_pred CCCChhHHHHHHHHHhCCCE---EEEEcCCCHHHHHH------HHHHhCCCCCc
Q 003909 591 DPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDHL 635 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~~------~a~~~gi~~~~ 635 (787)
.+++++.++.++.++++|++ .++.-|+++.+..+ .|+++|+....
T Consensus 11 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14169 11 KKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLM 64 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEE
Confidence 45677888888888887765 45677777766543 57788887543
No 223
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=45.36 E-value=58 Score=26.48 Aligned_cols=48 Identities=17% Similarity=0.086 Sum_probs=39.7
Q ss_pred EeccCCCCChhHHHHHHHHHhCCCEEEE-EcCCCHHHHHHHHHHhCCCC
Q 003909 586 LVGMLDPPREEVKNAMLSCMTAGIRVIV-VTGDNKSTAESICHKIGAFD 633 (787)
Q Consensus 586 ~i~~~d~~~~~~~~~i~~l~~~gi~v~i-~TGd~~~~a~~~a~~~gi~~ 633 (787)
++.+.+...+.+.+..+.|++.|+++.+ ..+++...-...|++.|+..
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~~ 54 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIPY 54 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCCE
Confidence 4455677888999999999999999988 67788888888899999764
No 224
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.32 E-value=1.1e+02 Score=31.40 Aligned_cols=45 Identities=20% Similarity=0.337 Sum_probs=32.1
Q ss_pred CCCChhHHHHHHHHHhCCCE---EEEEcCCCHHHHHH------HHHHhCCCCCc
Q 003909 591 DPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDHL 635 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~~------~a~~~gi~~~~ 635 (787)
++++.+.++.++.++++|++ .++.-|+++.+..+ .|+++|+....
T Consensus 11 ~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14182 11 AKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVE 64 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45678888888888888775 45667877776543 57788887543
No 225
>PF15584 Imm44: Immunity protein 44
Probab=43.86 E-value=11 Score=30.64 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=16.4
Q ss_pred CCcEEEecCCCccccceeee
Q 003909 144 PGDIVEVNVGCKIPADMRMI 163 (787)
Q Consensus 144 ~GDII~l~~G~~vPaD~~il 163 (787)
+.+-..|+.|++||||||--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45567889999999999863
No 226
>PRK11507 ribosome-associated protein; Provisional
Probab=43.81 E-value=31 Score=26.89 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=23.1
Q ss_pred EEEeCCeEEEeecCCCCCCcEEEecC
Q 003909 127 TVLRNGCFSILPAAELVPGDIVEVNV 152 (787)
Q Consensus 127 ~v~r~g~~~~i~~~~Lv~GDII~l~~ 152 (787)
.|..||+...-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57889999999999999999999853
No 227
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=43.45 E-value=34 Score=34.98 Aligned_cols=48 Identities=21% Similarity=0.287 Sum_probs=41.5
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH---HhCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH---KIGAF 632 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~---~~gi~ 632 (787)
|++...+.+-|++.++++.|++.|-++.++|..+..+-+.+++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 6777789999999999999999999999999999888877765 46665
No 228
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=42.15 E-value=32 Score=30.02 Aligned_cols=40 Identities=15% Similarity=0.268 Sum_probs=30.7
Q ss_pred CChhHHHHHHHHHhCCCE-EEEEcCCCHHHHHHHHHHhCCC
Q 003909 593 PREEVKNAMLSCMTAGIR-VIVVTGDNKSTAESICHKIGAF 632 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~-v~i~TGd~~~~a~~~a~~~gi~ 632 (787)
..+.+.+.++++.+.|++ +|+.+|...+.+...|++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 567889999999999996 9999999999999999998874
No 229
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.73 E-value=1.5e+02 Score=30.62 Aligned_cols=44 Identities=18% Similarity=0.414 Sum_probs=29.6
Q ss_pred CCCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHHH------HHHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTAE------SICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a~------~~a~~~gi~~~ 634 (787)
.+++.+.++.++.++++ |++ .++..|+++.+.. ..|+++|+...
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (286)
T PRK14184 11 ATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSE 64 (286)
T ss_pred HHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 35677788888888776 665 3556777776543 35777887654
No 230
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.64 E-value=1.2e+02 Score=31.16 Aligned_cols=44 Identities=18% Similarity=0.319 Sum_probs=26.9
Q ss_pred CCCChhHHHHHHHHHhCCCE---EEEEcCCCHHHHHH------HHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~~------~a~~~gi~~~ 634 (787)
++++++.++.++++++.|++ .++.-|+++.+..+ .|+++|+...
T Consensus 13 ~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 65 (285)
T PRK14189 13 KQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSL 65 (285)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEE
Confidence 45667777777777776654 34555666654433 4667777643
No 231
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.06 E-value=1.3e+02 Score=30.95 Aligned_cols=61 Identities=10% Similarity=0.206 Sum_probs=35.0
Q ss_pred EEecChhhHHHHHHHHhh--CCCEEEEEcC-CccCHH---HHhhCCceEecC--Ccc--HHHHhhcCeecc
Q 003909 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGD-GVNDAP---ALKKADIGIAMG--SGT--AVAKSASDMVLA 726 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~--~~~~v~~vGD-g~ND~~---ml~~A~vgia~~--~~~--~~~~~~ad~v~~ 726 (787)
|.=|+|..=.++++.... .|..++++|- +.-=.| +|..+|..|.+- ... ......||+++.
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 444666655555555432 3889999998 433333 556666666653 221 233456788764
No 232
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.83 E-value=1.1e+02 Score=31.65 Aligned_cols=44 Identities=16% Similarity=0.338 Sum_probs=29.1
Q ss_pred CCCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHHHH------HHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTAES------ICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a~~------~a~~~gi~~~ 634 (787)
++++++.++.++.+++. |++ .++.-|+++.+..+ .|+++|+...
T Consensus 12 ~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~ 65 (297)
T PRK14186 12 AEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASF 65 (297)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEE
Confidence 45677777888888766 654 35666777665433 5777887653
No 233
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=40.63 E-value=1.4e+02 Score=29.14 Aligned_cols=107 Identities=13% Similarity=0.115 Sum_probs=68.1
Q ss_pred eccCC-CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceE
Q 003909 587 VGMLD-PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 587 i~~~d-~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
+-+++ ++.+..+..+-.|++.+ -|+.|.-....|..+.+++||.+.... .+ .-+..... ...+
T Consensus 94 LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFeg---ii-~~e~~np~----------~~~~ 157 (244)
T KOG3109|consen 94 LPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEG---II-CFETLNPI----------EKTV 157 (244)
T ss_pred CcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccc---ee-EeeccCCC----------CCce
Confidence 34444 23444667777777665 899999999999999999999764311 11 11111100 1125
Q ss_pred EEecChhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEe
Q 003909 666 FTRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
.|.-+++.=...++...-. .+.+.++-|+.+.+..-+..|..-.
T Consensus 158 vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tv 202 (244)
T KOG3109|consen 158 VCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTV 202 (244)
T ss_pred eecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeE
Confidence 5655555444455544443 6789999999999998888887543
No 234
>PLN02645 phosphoglycolate phosphatase
Probab=40.59 E-value=46 Score=34.98 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=27.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEec
Q 003909 675 RMLVEALQNQNEVVAMTGDGV-NDAPALKKADI-GIAM 710 (787)
Q Consensus 675 ~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~v-gia~ 710 (787)
..+.+.+....+.++||||.. +|+.+-+.||+ +|.+
T Consensus 237 ~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV 274 (311)
T PLN02645 237 DYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLV 274 (311)
T ss_pred HHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEE
Confidence 344555555577899999997 99999999997 3344
No 235
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=40.39 E-value=59 Score=28.39 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=29.6
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCC
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGA 631 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi 631 (787)
-.+++.++++.++++|++++.+|++.. ....+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 567899999999999999999998764 4456665554
No 236
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=40.31 E-value=25 Score=21.83 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=12.8
Q ss_pred CCCCCHHHHHHHHhh
Q 003909 21 TKGLTDSQVARHVRI 35 (787)
Q Consensus 21 ~~GLs~~~~~~~~~~ 35 (787)
++|||.+++..|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 679999999999875
No 237
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=40.22 E-value=1.4e+02 Score=30.72 Aligned_cols=141 Identities=14% Similarity=0.186 Sum_probs=87.8
Q ss_pred HHHHHHHHHhhccccchhhhhhhccCCccccCCCCCC--------------CCCcEEEEEeccCCCCChhHHHHHHHHHh
Q 003909 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDD--------------EKDLTFIGLVGMLDPPREEVKNAMLSCMT 606 (787)
Q Consensus 541 ~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~--------------e~~l~~lG~i~~~d~~~~~~~~~i~~l~~ 606 (787)
.++.....+++. +||.++.++.+..|+-.....+.. .....-++++.=.-...++..+.++.|++
T Consensus 100 ~kv~~~v~~~~~-~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~~~~~v~vvsQTT~~~~~~~~i~~~l~~ 178 (280)
T TIGR00216 100 TKVHNAVKKYAK-EGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFKVEDLLGVVSQTTLSQEDTKEIVAELKA 178 (280)
T ss_pred HHHHHHHHHHHh-CCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCCCCCcEEEEEcCCCcHHHHHHHHHHHHH
Confidence 456667777877 999999999887774322211110 01113377777666677788888888887
Q ss_pred CC----C----EEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHH
Q 003909 607 AG----I----RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (787)
Q Consensus 607 ~g----i----~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 678 (787)
+. + .++-+|-+....++.+|+++.+.- |...-+...-.++.
T Consensus 179 ~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~mi-------------------------------VVGg~nSsNT~rL~ 227 (280)
T TIGR00216 179 RVPQKEVPVFNTICYATQNRQDAVKELAPEVDLMI-------------------------------VIGGKNSSNTTRLY 227 (280)
T ss_pred hCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEE-------------------------------EECCCCCchHHHHH
Confidence 65 2 367788888888888888765422 22222233344566
Q ss_pred HHHhhCCCEEEEEcCCc-cCHHHHhhCC-ceEecCCc
Q 003909 679 EALQNQNEVVAMTGDGV-NDAPALKKAD-IGIAMGSG 713 (787)
Q Consensus 679 ~~l~~~~~~v~~vGDg~-ND~~ml~~A~-vgia~~~~ 713 (787)
+..+..+..+..+.+.. -|..+|+.++ |||.-|.+
T Consensus 228 ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAGAS 264 (280)
T TIGR00216 228 EIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAGAS 264 (280)
T ss_pred HHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEecCC
Confidence 66666676677765532 3667777554 57777733
No 238
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=39.47 E-value=16 Score=27.99 Aligned_cols=24 Identities=38% Similarity=0.537 Sum_probs=13.8
Q ss_pred EEEeCCeEEEeecCCCCCCcEEEe
Q 003909 127 TVLRNGCFSILPAAELVPGDIVEV 150 (787)
Q Consensus 127 ~v~r~g~~~~i~~~~Lv~GDII~l 150 (787)
.|.-||+...-.-..|.+||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 466799999999999999999999
No 239
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.14 E-value=1.3e+02 Score=30.98 Aligned_cols=44 Identities=23% Similarity=0.379 Sum_probs=30.4
Q ss_pred CCCChhHHHHHHHHHhCCCE---EEEEcCCCHHHHHH------HHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~~------~a~~~gi~~~ 634 (787)
.+++.+.++.+++++++|++ .++.-|+++.+..+ .|+++|+...
T Consensus 11 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 63 (282)
T PRK14166 11 AKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSL 63 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 45677888888888887765 35667777765433 5778888743
No 240
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=37.94 E-value=24 Score=33.94 Aligned_cols=29 Identities=17% Similarity=0.335 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKS 620 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~ 620 (787)
++-|++.+++++|.+.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 57789999999999999999999988765
No 241
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.88 E-value=1.5e+02 Score=30.46 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=36.0
Q ss_pred EEecChhhHHHHHHHHhh--CCCEEEEEcCCcc----CHHHHhhCCceEecC--Ccc--HHHHhhcCeecc
Q 003909 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG--SGT--AVAKSASDMVLA 726 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~--~~~~v~~vGDg~N----D~~ml~~A~vgia~~--~~~--~~~~~~ad~v~~ 726 (787)
|.=|+|..=.++++.... .|+.|+++|.+.. =..||...|..|.+. ... ......||+++.
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIs 207 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVV 207 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 445677666666665543 4889999998764 233555566555553 221 223345788765
No 242
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=37.82 E-value=3.8e+02 Score=27.31 Aligned_cols=103 Identities=19% Similarity=0.280 Sum_probs=54.5
Q ss_pred ccCCCCChhHHHHHHHHHhCCCE-EEEEcCCC-HHHHHHHHHHhC-CCCCccccccccccchhhccCChHHHHHhhccce
Q 003909 588 GMLDPPREEVKNAMLSCMTAGIR-VIVVTGDN-KSTAESICHKIG-AFDHLVDFVGRSYTASEFEELPAMQQTVALQHMA 664 (787)
Q Consensus 588 ~~~d~~~~~~~~~i~~l~~~gi~-v~i~TGd~-~~~a~~~a~~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (787)
.+-|-+-++..+.++.+++.|+. +.++|-.. .+..+.+++... +.... ...-.+|..
T Consensus 124 iipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~v---S~~GvTG~~----------------- 183 (263)
T CHL00200 124 IIPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLV---STTGVTGLK----------------- 183 (263)
T ss_pred EecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEEE---cCCCCCCCC-----------------
Confidence 34455557777777888888875 44555554 345556666554 21110 001111111
Q ss_pred EEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHH---HhhCCc-eEecCCc
Q 003909 665 LFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA---LKKADI-GIAMGSG 713 (787)
Q Consensus 665 v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~m---l~~A~v-gia~~~~ 713 (787)
...+.+-.+.++.+++.-..-+++|=|.|+... +..+|. ||-+|++
T Consensus 184 ---~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVGSa 233 (263)
T CHL00200 184 ---TELDKKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIGSA 233 (263)
T ss_pred ---ccccHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEECHH
Confidence 011334456666666654445667999995544 444433 6667643
No 243
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.96 E-value=1.6e+02 Score=30.30 Aligned_cols=44 Identities=20% Similarity=0.505 Sum_probs=28.8
Q ss_pred CCCChhHHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTA------ESICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~---v~i~TGd~~~~a------~~~a~~~gi~~~ 634 (787)
+.++.+.++.+++++++|++ .++.-|+++.+. ...|+++|+...
T Consensus 13 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 65 (284)
T PRK14190 13 KEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSE 65 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 45677778888888877764 344467776544 335777887653
No 244
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=35.70 E-value=9.2e+02 Score=29.67 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C-------CeeEE----EeCCeEEEeecCCCCCCcEEEecCCCcccc
Q 003909 95 LILAANAAVGVITETNAEKALEELRAYQ-----A-------DIATV----LRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (787)
Q Consensus 95 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~-----~-------~~~~v----~r~g~~~~i~~~~Lv~GDII~l~~G~~vPa 158 (787)
++-.+..++..+...++-+.++++.... . ....+ +.-|..+.+...+.+|-|.+.++. .-+=+
T Consensus 133 ~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g-~~l~V 211 (902)
T PRK10517 133 AISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQA-RDLFV 211 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEc-CceEE
Confidence 3333344455555566665666663321 1 11122 246889999999999999988864 33334
Q ss_pred ceeeeee
Q 003909 159 DMRMIEM 165 (787)
Q Consensus 159 D~~il~~ 165 (787)
|=-.|.|
T Consensus 212 DES~LTG 218 (902)
T PRK10517 212 AQASLTG 218 (902)
T ss_pred EecCcCC
Confidence 5444443
No 245
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=35.35 E-value=45 Score=28.00 Aligned_cols=29 Identities=34% Similarity=0.448 Sum_probs=23.6
Q ss_pred EEEeCCeEEEeecCCCCCCcEEEecCCCcc
Q 003909 127 TVLRNGCFSILPAAELVPGDIVEVNVGCKI 156 (787)
Q Consensus 127 ~v~r~g~~~~i~~~~Lv~GDII~l~~G~~v 156 (787)
+|.-||... -++.++++||+|.|.-|...
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 566677766 78999999999999988643
No 246
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=34.72 E-value=1.2e+02 Score=30.80 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=63.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHhCCCCCccccccccccchhhc---cC-ChHHHHHhhccce
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAFDHLVDFVGRSYTASEFE---EL-PAMQQTVALQHMA 664 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a---~~~gi~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~ 664 (787)
.+.++..+.|+.|++.|+.|.-+|.|.+......+ +++||+..... ...+.+. .. ........+.+..
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~-----~~~~~~~~~~~~~~~~~~~~~~~~GI 155 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSS-----FPEDGIISFPVFDSALSRAPSFYDGI 155 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccc-----cccCcceecccccCCCCCCceeecCe
Confidence 36688999999999999999999999987665544 44676543211 0000000 00 0000111122333
Q ss_pred EEEecChhhHHHHHHHHh----hCCCEEEEEcCCccCHHHHhhC
Q 003909 665 LFTRVEPSHKRMLVEALQ----NQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 665 v~~~~~p~~K~~~v~~l~----~~~~~v~~vGDg~ND~~ml~~A 704 (787)
+|+. ..+|...+..+- ...+.|.++-|....+..+..|
T Consensus 156 lft~--~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 156 LFTG--GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKA 197 (252)
T ss_pred EEeC--CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHH
Confidence 4443 356666655543 3477899999999888766444
No 247
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=34.09 E-value=3.6e+02 Score=32.67 Aligned_cols=77 Identities=17% Similarity=0.163 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecC-----CceE
Q 003909 97 LAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS-----NQLR 171 (787)
Q Consensus 97 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~-----g~~~ 171 (787)
++++..--....+..++...+++++ ++.. .+..=++.|-...|...|.||.|+.++.... +.+.
T Consensus 221 ~iisv~Si~~sv~e~r~qs~rlr~m-------v~~~----~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~L 289 (1140)
T KOG0208|consen 221 VIISVYSIVLSVYETRKQSIRLRSM-------VKFT----CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALL 289 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------hcCC----ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEE
Confidence 3444444445556666666666543 2222 3334466799999999999999999996422 3344
Q ss_pred EecccccCCcccc
Q 003909 172 VDQAILTGESCSV 184 (787)
Q Consensus 172 vdes~ltGEs~pv 184 (787)
++-+.+.-|++..
T Consensus 290 i~g~civNEsmLT 302 (1140)
T KOG0208|consen 290 ISGDCIVNESMLT 302 (1140)
T ss_pred EeCcEEeeccccc
Confidence 5556666666654
No 248
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.91 E-value=1.6e+02 Score=30.34 Aligned_cols=44 Identities=18% Similarity=0.361 Sum_probs=29.4
Q ss_pred CCCChhHHHHHHHHHhCCCEE---EEEcCCCHHHHH------HHHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIRV---IVVTGDNKSTAE------SICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v---~i~TGd~~~~a~------~~a~~~gi~~~ 634 (787)
++++++.++.++.+++.|+++ ++.-|+++.+.. ..|+++|+...
T Consensus 13 ~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 65 (284)
T PRK14193 13 DEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSI 65 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 456777788888888777754 344677666543 35777887643
No 249
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=33.73 E-value=4.5e+02 Score=30.00 Aligned_cols=79 Identities=14% Similarity=0.091 Sum_probs=56.5
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCCHH-HHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhH
Q 003909 596 EVKNAMLSCMTAGIRVIVVTGDNKS-TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHK 674 (787)
Q Consensus 596 ~~~~~i~~l~~~gi~v~i~TGd~~~-~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 674 (787)
+...+++.+++.+-++.+++=.+.. .+..++.-+++.-. .+.-.++++-
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i~------------------------------~~~~~~~~e~ 144 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRIE------------------------------QRSYVTEEDA 144 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceE------------------------------EEEecCHHHH
Confidence 4778888888888888888766644 56667777776532 5555778888
Q ss_pred HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc
Q 003909 675 RMLVEALQNQNEVVAMTGDGVNDAPALKKADI 706 (787)
Q Consensus 675 ~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v 706 (787)
...++.+++.|..+.+ ||+.- ..+-+.++.
T Consensus 145 ~~~v~~lk~~G~~~vv-G~~~~-~~~A~~~g~ 174 (538)
T PRK15424 145 RGQINELKANGIEAVV-GAGLI-TDLAEEAGM 174 (538)
T ss_pred HHHHHHHHHCCCCEEE-cCchH-HHHHHHhCC
Confidence 8999999999976655 99765 444445544
No 250
>PLN02591 tryptophan synthase
Probab=33.46 E-value=3.5e+02 Score=27.33 Aligned_cols=101 Identities=21% Similarity=0.279 Sum_probs=57.0
Q ss_pred CCCChhHHHHHHHHHhCCCE-EEEEcCCCH-HHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 591 DPPREEVKNAMLSCMTAGIR-VIVVTGDNK-STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~-v~i~TGd~~-~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
|-+-++..+..+.+++.|+. +.++|-... +..+.+++...-.-+.+. ..-.+|.. .
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~Vs--~~GvTG~~--------------------~ 171 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYLVS--STGVTGAR--------------------A 171 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEee--CCCCcCCC--------------------c
Confidence 33447788888888888886 455656553 456666666421111100 00111110 0
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCcc---CHHHHhhC-CceEecCCc
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVN---DAPALKKA-DIGIAMGSG 713 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~N---D~~ml~~A-~vgia~~~~ 713 (787)
..|.+-.+.++.+++....-+++|-|.+ |+..+... -=|+-+|++
T Consensus 172 ~~~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSa 220 (250)
T PLN02591 172 SVSGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGSA 220 (250)
T ss_pred CCchhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECHH
Confidence 1244556667777776556677799998 66666555 347777643
No 251
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=32.90 E-value=2.7e+02 Score=29.48 Aligned_cols=45 Identities=16% Similarity=0.312 Sum_probs=29.8
Q ss_pred CCCCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHHHH------HHHHhCCCCC
Q 003909 590 LDPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTAES------ICHKIGAFDH 634 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a~~------~a~~~gi~~~ 634 (787)
-++++.+.++.+++++++ |++ .+++-|+++.+..+ .|+++||...
T Consensus 65 A~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~ 119 (345)
T PLN02897 65 AEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSL 119 (345)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEE
Confidence 356777788888888776 654 44666776665433 5777887653
No 252
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=31.75 E-value=2e+02 Score=35.49 Aligned_cols=39 Identities=18% Similarity=0.077 Sum_probs=29.8
Q ss_pred ChhHHHHHHHHH----hCCCEEEEEcCCCHHHHHHHHHHhCCC
Q 003909 594 REEVKNAMLSCM----TAGIRVIVVTGDNKSTAESICHKIGAF 632 (787)
Q Consensus 594 ~~~~~~~i~~l~----~~gi~v~i~TGd~~~~a~~~a~~~gi~ 632 (787)
.+..++.++.++ ...+-++++|||+...+..+.++.|+.
T Consensus 786 ~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp 828 (1050)
T TIGR02468 786 LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLN 828 (1050)
T ss_pred HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCC
Confidence 333455555565 233789999999999999999999987
No 253
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=31.75 E-value=1.1e+02 Score=25.16 Aligned_cols=50 Identities=16% Similarity=0.078 Sum_probs=39.7
Q ss_pred EEEeccCC---CCChhHHHHHHHHHhCCCEEEEE-cCCCHHHHHHHHHHhCCCC
Q 003909 584 IGLVGMLD---PPREEVKNAMLSCMTAGIRVIVV-TGDNKSTAESICHKIGAFD 633 (787)
Q Consensus 584 lG~i~~~d---~~~~~~~~~i~~l~~~gi~v~i~-TGd~~~~a~~~a~~~gi~~ 633 (787)
+.++.+.+ +..+-+.+..+.|+++|+++.+- ++++...-..-|...|+..
T Consensus 2 v~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p~ 55 (94)
T PF03129_consen 2 VVIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIPF 55 (94)
T ss_dssp EEEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTESE
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCeE
Confidence 34566666 67788899999999999998877 6667777777888888764
No 254
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=31.64 E-value=23 Score=33.85 Aligned_cols=13 Identities=38% Similarity=0.363 Sum_probs=11.9
Q ss_pred EEeCCCCccccCc
Q 003909 344 ICSDKTGTLTTNM 356 (787)
Q Consensus 344 i~~DKTGTLT~~~ 356 (787)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999986
No 255
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=31.17 E-value=1.2e+02 Score=23.67 Aligned_cols=31 Identities=26% Similarity=0.282 Sum_probs=23.1
Q ss_pred CeeEEEeCCeEEEeec---CCCCCCcEEEecCCC
Q 003909 124 DIATVLRNGCFSILPA---AELVPGDIVEVNVGC 154 (787)
Q Consensus 124 ~~~~v~r~g~~~~i~~---~~Lv~GDII~l~~G~ 154 (787)
..++|-.+|..++|+. .++.|||-|.+..|.
T Consensus 17 ~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 17 GMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 4567778899888864 458899999999994
No 256
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.92 E-value=2.1e+02 Score=29.37 Aligned_cols=62 Identities=15% Similarity=0.282 Sum_probs=35.1
Q ss_pred EEecChhhHHHHHHHHhh--CCCEEEEEcCCc-cCHH---HHhhCCceEec--CCcc--HHHHhhcCeeccC
Q 003909 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGV-NDAP---ALKKADIGIAM--GSGT--AVAKSASDMVLAD 727 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~--~~~~v~~vGDg~-ND~~---ml~~A~vgia~--~~~~--~~~~~~ad~v~~~ 727 (787)
|.=++|..=.++++.... .|..|..+|.|. -=-| ||...+-.|.+ .... ......||+++..
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 444667655555555542 388999999984 3444 55555544444 3221 2233457887654
No 257
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=30.92 E-value=1.2e+02 Score=24.31 Aligned_cols=47 Identities=17% Similarity=0.119 Sum_probs=36.7
Q ss_pred EeccCCCCChhHHHHHHHHHhCCCEEEEE-cCCCHHHHHHHHHHhCCC
Q 003909 586 LVGMLDPPREEVKNAMLSCMTAGIRVIVV-TGDNKSTAESICHKIGAF 632 (787)
Q Consensus 586 ~i~~~d~~~~~~~~~i~~l~~~gi~v~i~-TGd~~~~a~~~a~~~gi~ 632 (787)
++.+.++.++.+.+..++|+++|+++.+. .+++.......|+..|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 44456667788999999999999998874 456777778888888874
No 258
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=30.45 E-value=57 Score=28.60 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=26.3
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAES 624 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ 624 (787)
-.+++.++++.++++|.+++.+|+.+......
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~ 89 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGSTLAR 89 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChHHH
Confidence 45679999999999999999999986654333
No 259
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=30.09 E-value=1.3e+02 Score=26.34 Aligned_cols=55 Identities=15% Similarity=0.171 Sum_probs=42.3
Q ss_pred CCcEEEEEeccCCCCChhHHHHHHHHHhCCC-E-EEEEcCCCHHHHHHHHHHhCCCC
Q 003909 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGI-R-VIVVTGDNKSTAESICHKIGAFD 633 (787)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi-~-v~i~TGd~~~~a~~~a~~~gi~~ 633 (787)
.+-.++++-.......+.+++.++.|+++|. + .+++-|..+..-..-.++.|++.
T Consensus 49 ~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~ 105 (122)
T cd02071 49 EDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAE 105 (122)
T ss_pred cCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCE
Confidence 3445777777777888899999999999977 3 46777777766667778999875
No 260
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=29.74 E-value=6.3e+02 Score=28.50 Aligned_cols=36 Identities=22% Similarity=0.172 Sum_probs=26.3
Q ss_pred eCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecC
Q 003909 130 RNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS 167 (787)
Q Consensus 130 r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~ 167 (787)
+-|....+...+.+|-|.+.++- ..=+|--.|.|++
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs 88 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGES 88 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCC
Confidence 56889999999999999999865 3444544554443
No 261
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.72 E-value=1.2e+02 Score=31.31 Aligned_cols=45 Identities=18% Similarity=0.315 Sum_probs=31.4
Q ss_pred CCCChhHHHHHHHHHhCCCE---EEEEcCCCHHHHHH------HHHHhCCCCCc
Q 003909 591 DPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDHL 635 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~---v~i~TGd~~~~a~~------~a~~~gi~~~~ 635 (787)
++++.+.++.++++++.|++ .++.-|+++.+..+ .|+++|+....
T Consensus 12 ~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 65 (297)
T PRK14167 12 AQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAID 65 (297)
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45677888888888888874 45667877765433 57788886543
No 262
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=29.69 E-value=67 Score=29.81 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=36.3
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a 626 (787)
+-.++|+-.-- -.+.+.++++..+++|++++-+||++-.....++
T Consensus 110 GDvLigISTSG--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 110 GDVLIGISTSG--NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CCEEEEEeCCC--CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 44677765544 5688999999999999999999999987766655
No 263
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=28.42 E-value=54 Score=28.88 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=27.6
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHH
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI 625 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~ 625 (787)
-.+++.++++.+|++|++++.+|+.........
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 91 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAKL 91 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhh
Confidence 568899999999999999999999876554443
No 264
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.91 E-value=3.1e+02 Score=28.27 Aligned_cols=44 Identities=20% Similarity=0.395 Sum_probs=26.8
Q ss_pred CCCChhHHHHHHHHHhCC-C---EEEEEcCCCHHHH------HHHHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTAG-I---RVIVVTGDNKSTA------ESICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~g-i---~v~i~TGd~~~~a------~~~a~~~gi~~~ 634 (787)
++++.+.++.+++++++| . -.++.-|+++.+. ...|+++|+...
T Consensus 13 ~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 66 (284)
T PRK14177 13 EKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSE 66 (284)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 456777777777777653 2 2455666665543 335677777643
No 265
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=27.35 E-value=2.1e+02 Score=29.63 Aligned_cols=40 Identities=13% Similarity=0.103 Sum_probs=31.1
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHH-HHHHHhCCC
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAE-SICHKIGAF 632 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~-~~a~~~gi~ 632 (787)
=.+++...-+.|+..|.+++++|.+....+. ...+.++..
T Consensus 61 GP~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 61 GPPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred ChHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 3678888889999999999999988777654 455556654
No 266
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=26.65 E-value=2e+02 Score=27.23 Aligned_cols=93 Identities=9% Similarity=0.096 Sum_probs=55.4
Q ss_pred cCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+..++-|++.++|++-+++|+++.+-|..+-..-+-+.... ... +. +..++ =|.+
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs---~ag-dL-~~lfs--------------------GyfD 154 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHS---DAG-DL-NSLFS--------------------GYFD 154 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhccc---ccc-cH-Hhhhc--------------------ceee
Confidence 45688999999999999999999988877655322221111 000 00 00000 0111
Q ss_pred cC------hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc
Q 003909 669 VE------PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI 706 (787)
Q Consensus 669 ~~------p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v 706 (787)
.+ ...-.++.....-....+++..|..+.+.+-+.+|+
T Consensus 155 ttiG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 155 TTIGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred ccccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcch
Confidence 11 112245555555557789999999998888666555
No 267
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=26.63 E-value=3.5e+02 Score=28.85 Aligned_cols=45 Identities=20% Similarity=0.443 Sum_probs=27.1
Q ss_pred cCCCCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHHH------HHHHHhCCCC
Q 003909 589 MLDPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTAE------SICHKIGAFD 633 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a~------~~a~~~gi~~ 633 (787)
+-++++.+.++.+++++++ |+. .++.-|+++.+.. ..|+++|+..
T Consensus 81 iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~ 135 (364)
T PLN02616 81 VAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINS 135 (364)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3345667777777777766 553 4455666665543 3466777753
No 268
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=26.52 E-value=73 Score=27.87 Aligned_cols=31 Identities=26% Similarity=0.200 Sum_probs=26.7
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
-.+++.++++.++++|.+++.+|+.......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la 89 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSPLA 89 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCcHH
Confidence 4789999999999999999999998775433
No 269
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=25.97 E-value=97 Score=22.94 Aligned_cols=26 Identities=15% Similarity=0.185 Sum_probs=19.1
Q ss_pred ChhHHHHHHHHHhCCCEEEEEcCCCH
Q 003909 594 REEVKNAMLSCMTAGIRVIVVTGDNK 619 (787)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~i~TGd~~ 619 (787)
.|+-++.++.|.++|++|-|.|-+..
T Consensus 1 d~~~qegLr~L~~aG~~v~iM~~~eF 26 (55)
T PF05240_consen 1 DPDYQEGLRRLCQAGAQVSIMTYSEF 26 (55)
T ss_dssp SHHHHHHHHHHHHTT-EEEE--HHHH
T ss_pred CcHHHHHHHHHHHCCCeEEecCcHHH
Confidence 36788999999999999999886543
No 270
>cd01917 ACS_2 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA. ACS forms a heterotetramer with carbon monoxide dehydrogenase (CODH) consisting of two ACS and two CODH subunits. CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP). ACS has three structural domains, an N-terminal rossman fold domain with a helical region at its N-terminus which interacts with CODH, and two alpha + beta fold domains. A Ni-Fe-S center referred to as the A-cluster is located in the C-terminal domain. A large cavity exists between the three domains which may bind CoA.
Probab=25.86 E-value=1.8e+02 Score=29.52 Aligned_cols=151 Identities=15% Similarity=0.149 Sum_probs=83.0
Q ss_pred cEEEEEeccCCC--CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHH
Q 003909 581 LTFIGLVGMLDP--PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTV 658 (787)
Q Consensus 581 l~~lG~i~~~d~--~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (787)
++.-|++.+--. =.+++.+.+++++++|+-++ ++|+-......-..++|.+....+.. .+.+... ....
T Consensus 125 G~IPGva~ivG~a~~~e~~~~I~~e~q~r~~lv~-l~G~i~~q~~E~G~~lg~~~~lvp~G-~~ts~~H-------~~g~ 195 (287)
T cd01917 125 WTIPGEAVILGRAKDSKALKKIVDDLMGRGFMLF-LCDEIVEQLLEENVKLGLDYIAYPLG-NFTQAIH-------AANY 195 (287)
T ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHHCCcEEE-EecHHHHHHHHcCCeeccceeEeecC-chhhHHH-------HHHH
Confidence 344455544433 45678999999999998554 56642222222233455444322221 1110000 0001
Q ss_pred hhccceEEEecChhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhC-----CceEecCCccHHHHhhcCeeccCCCchH
Q 003909 659 ALQHMALFTRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKA-----DIGIAMGSGTAVAKSASDMVLADDNFAT 732 (787)
Q Consensus 659 ~~~~~~v~~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A-----~vgia~~~~~~~~~~~ad~v~~~~~~~~ 732 (787)
.+.-..+|+..+|-+..++..+...+ +-.|.+.| ..+|...--.+ |+.+-....-++.++.-+.++.+.+.+.
T Consensus 196 AiRaAliFggv~pGn~~ei~dY~~nRV~Afv~A~G-~~s~~~~A~aaGai~~GfPVI~d~~~pei~~~P~~~~~~~~~d~ 274 (287)
T cd01917 196 ALRAGLMFGGIEPGKREEIRDYQRRRVRAFVLYLG-ELDMVKTAAAAGAIFTGFPVITDQELPEDKQIPDWFFSSSDYDK 274 (287)
T ss_pred HHHHHHHhCCCCCcCHHHHHHHHHhhcCEEEEecc-ccCHHHHHHHhhHHHcCCCEEeCCCCcccccCccceecCCCHHH
Confidence 11122378889998888998888766 67778888 45554443333 3333344455655556677777778887
Q ss_pred HHHHHHHHH
Q 003909 733 IVAAVAEGR 741 (787)
Q Consensus 733 i~~~i~~gR 741 (787)
+.+-=-+.|
T Consensus 275 iv~~alE~R 283 (287)
T cd01917 275 IVQNALEMR 283 (287)
T ss_pred HHHHHHHhc
Confidence 765433444
No 271
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=25.75 E-value=45 Score=24.43 Aligned_cols=12 Identities=33% Similarity=0.595 Sum_probs=10.2
Q ss_pred CCCcEEEecCCC
Q 003909 143 VPGDIVEVNVGC 154 (787)
Q Consensus 143 v~GDII~l~~G~ 154 (787)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999885
No 272
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.74 E-value=1.4e+02 Score=30.76 Aligned_cols=45 Identities=13% Similarity=0.344 Sum_probs=31.4
Q ss_pred CCCChhHHHHHHHHHhCCCEE---EEEcCCCHHHHHH------HHHHhCCCCCc
Q 003909 591 DPPREEVKNAMLSCMTAGIRV---IVVTGDNKSTAES------ICHKIGAFDHL 635 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v---~i~TGd~~~~a~~------~a~~~gi~~~~ 635 (787)
++++.+.++.++.+++.|+++ ++.-|+++.+..+ .|+++|+....
T Consensus 13 ~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~ 66 (286)
T PRK14175 13 KDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEI 66 (286)
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 456778888888888877653 5567877766543 57788886543
No 273
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.71 E-value=3.4e+02 Score=27.89 Aligned_cols=61 Identities=18% Similarity=0.197 Sum_probs=32.6
Q ss_pred EEecChhhHHHHHHHHhh--CCCEEEEEcCCcc----CHHHHhhCCceEecC--Cc--cHHHHhhcCeecc
Q 003909 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG--SG--TAVAKSASDMVLA 726 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~--~~~~v~~vGDg~N----D~~ml~~A~vgia~~--~~--~~~~~~~ad~v~~ 726 (787)
|.=|+|..=.++++..+- .|..|+.+|.|.. =+.||...|--|.+. .. -......||+++.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~ 206 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIV 206 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEE
Confidence 334666555555555432 3889999998843 223444444444432 11 1233456788764
No 274
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=25.45 E-value=4.8e+02 Score=25.12 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=25.7
Q ss_pred hHHHHHHHHHhCCCEEEEEc-------CC------CHHHHHHHHHHhCCCCC
Q 003909 596 EVKNAMLSCMTAGIRVIVVT-------GD------NKSTAESICHKIGAFDH 634 (787)
Q Consensus 596 ~~~~~i~~l~~~gi~v~i~T-------Gd------~~~~a~~~a~~~gi~~~ 634 (787)
++.-++..+++.|++|+.++ ++ +...++..|+.+|+...
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~ 62 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLI 62 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEE
Confidence 44556667777787755443 22 45678889999998753
No 275
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=25.03 E-value=3.8e+02 Score=22.98 Aligned_cols=12 Identities=8% Similarity=0.221 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHH
Q 003909 108 ETNAEKALEELR 119 (787)
Q Consensus 108 ~~~~~~~~~~l~ 119 (787)
.+|.++..+++.
T Consensus 39 qkK~~k~~~~~~ 50 (106)
T PRK05585 39 QQKRQKEHKKML 50 (106)
T ss_pred HHHHHHHHHHHH
Confidence 334444444443
No 276
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=24.88 E-value=2.7e+02 Score=28.91 Aligned_cols=141 Identities=12% Similarity=0.151 Sum_probs=80.3
Q ss_pred HHHHHHHHHhhccccchhhhhhhccCCccccCCCCCC----------------CCCcEEEEEeccCCCCChhHHHHHHHH
Q 003909 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDD----------------EKDLTFIGLVGMLDPPREEVKNAMLSC 604 (787)
Q Consensus 541 ~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~----------------e~~l~~lG~i~~~d~~~~~~~~~i~~l 604 (787)
.++...+.+++. +||.++.++.+..|+-.....+.. ..+..-++++.=.-....+..+.++.|
T Consensus 100 ~k~~~~v~~~~~-~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l 178 (298)
T PRK01045 100 TKVHKEVARMSR-EGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIAAL 178 (298)
T ss_pred hHHHHHHHHHHh-CCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHH
Confidence 456666777776 999999999887764322221110 012233666665556666777777777
Q ss_pred HhCCCE--------EEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHH
Q 003909 605 MTAGIR--------VIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRM 676 (787)
Q Consensus 605 ~~~gi~--------v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 676 (787)
++..-. ++-+|-+....++.+|+++.+.- |...-....-.+
T Consensus 179 ~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~mi-------------------------------VVGg~~SsNT~k 227 (298)
T PRK01045 179 KERFPEIQGPPKDDICYATQNRQEAVKELAPQADLVI-------------------------------VVGSKNSSNSNR 227 (298)
T ss_pred HHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEEE-------------------------------EECCCCCccHHH
Confidence 665422 34567777777777777654321 222222333345
Q ss_pred HHHHHhhCCCEEEEEcCCc-cCHHHHhh-CCceEecCCc
Q 003909 677 LVEALQNQNEVVAMTGDGV-NDAPALKK-ADIGIAMGSG 713 (787)
Q Consensus 677 ~v~~l~~~~~~v~~vGDg~-ND~~ml~~-A~vgia~~~~ 713 (787)
+.+..+..+..+..+.+-. -|...|+. ..|||.-|.+
T Consensus 228 L~~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaGAS 266 (298)
T PRK01045 228 LREVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAGAS 266 (298)
T ss_pred HHHHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEecCC
Confidence 5555666666666665532 25556653 3578887733
No 277
>COG4996 Predicted phosphatase [General function prediction only]
Probab=24.74 E-value=1.5e+02 Score=26.35 Aligned_cols=43 Identities=9% Similarity=0.023 Sum_probs=40.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~ 634 (787)
.+.+.++++++.+|+.|+-+..+|=..+..|....+.+++..+
T Consensus 41 ~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~y 83 (164)
T COG4996 41 HLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQY 83 (164)
T ss_pred EEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhh
Confidence 5789999999999999999999999999999999999998864
No 278
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=24.68 E-value=4.7e+02 Score=24.79 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHh
Q 003909 287 GAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRM 322 (787)
Q Consensus 287 ~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l 322 (787)
.....+-+.-+++.++|-.+|.+++.......=+++
T Consensus 75 W~Ll~~S~ln~LlSaAc~vGL~~ai~~Tv~~~Gr~L 110 (188)
T PF12304_consen 75 WTLLVVSLLNALLSAACAVGLLLAISLTVANQGRNL 110 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhH
Confidence 333344444456667777777777666666554444
No 279
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=24.28 E-value=75 Score=26.34 Aligned_cols=26 Identities=38% Similarity=0.392 Sum_probs=20.5
Q ss_pred eEEEeCCeEEEeecCCCCCCcEEEec
Q 003909 126 ATVLRNGCFSILPAAELVPGDIVEVN 151 (787)
Q Consensus 126 ~~v~r~g~~~~i~~~~Lv~GDII~l~ 151 (787)
..+.++++.+.+.+++|++||.|.+.
T Consensus 74 ~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 74 LLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEecCCcEEEEEHHHCCCCCEEEec
Confidence 45556677778999999999998764
No 280
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.24 E-value=2.7e+02 Score=28.71 Aligned_cols=42 Identities=24% Similarity=0.267 Sum_probs=22.4
Q ss_pred CCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHH------HHHHHHhCCCC
Q 003909 592 PPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTA------ESICHKIGAFD 633 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a------~~~a~~~gi~~ 633 (787)
+++++.++.+++++++ |++ .++.-|+++.+. ...|+++|+..
T Consensus 13 ~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (288)
T PRK14171 13 EILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDT 64 (288)
T ss_pred HHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEE
Confidence 4555666666666655 543 244455554432 23456666654
No 281
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=23.70 E-value=69 Score=29.80 Aligned_cols=25 Identities=20% Similarity=0.307 Sum_probs=20.9
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCC
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGD 617 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd 617 (787)
+.+++.++|++|.+.|++++|+|.-
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCc
Confidence 3457999999999999999999953
No 282
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=23.57 E-value=2.1e+02 Score=21.77 Aligned_cols=26 Identities=23% Similarity=0.171 Sum_probs=12.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHH
Q 003909 51 KLVLKQFDDLLVKILIAAAVISFFLA 76 (787)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (787)
|.+++.+|..+-.++++++.+++.+.
T Consensus 4 K~~fk~iW~~~DIi~Fila~i~i~it 29 (63)
T PF06341_consen 4 KKFFKTIWKYFDIILFILAMIFINIT 29 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444555555544443
No 283
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=23.49 E-value=4.4e+02 Score=24.31 Aligned_cols=37 Identities=22% Similarity=0.335 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC
Q 003909 597 VKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD 633 (787)
Q Consensus 597 ~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~ 633 (787)
..+.=++|++.|+...+..|+.......+++++|+..
T Consensus 55 L~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~ 91 (165)
T PF00875_consen 55 LADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGATA 91 (165)
T ss_dssp HHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTESE
T ss_pred HHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcCe
Confidence 3444456788899999999999999999999999765
No 284
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=23.20 E-value=8.5e+02 Score=27.74 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=56.0
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhH
Q 003909 596 EVKNAMLSCMTAGIRVIVVTGDNK-STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHK 674 (787)
Q Consensus 596 ~~~~~i~~l~~~gi~v~i~TGd~~-~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 674 (787)
+...+++.+++.+-++.+++=.+. ..+..++.-++++-. ++.-.++++-
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i~------------------------------~~~~~~~~e~ 134 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDIV------------------------------QRSYVTEEDA 134 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceE------------------------------EEEecCHHHH
Confidence 467888888888878877776555 456777887777532 5666778888
Q ss_pred HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc
Q 003909 675 RMLVEALQNQNEVVAMTGDGVNDAPALKKADI 706 (787)
Q Consensus 675 ~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v 706 (787)
...++.+++.|..+.. ||+.- ..+-+.+|+
T Consensus 135 ~~~~~~l~~~G~~~vi-G~~~~-~~~A~~~gl 164 (526)
T TIGR02329 135 RSCVNDLRARGIGAVV-GAGLI-TDLAEQAGL 164 (526)
T ss_pred HHHHHHHHHCCCCEEE-CChHH-HHHHHHcCC
Confidence 8999999999976655 99744 333355554
No 285
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.87 E-value=2e+02 Score=29.62 Aligned_cols=44 Identities=16% Similarity=0.378 Sum_probs=27.7
Q ss_pred CCCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHHHH------HHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTAES------ICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a~~------~a~~~gi~~~ 634 (787)
++++.+.++.++.++++ |++ .++.-|+++.+..+ .|+++|+...
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 64 (285)
T PRK14191 11 YKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSD 64 (285)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 34667777777777754 554 44556777665433 5677777643
No 286
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.77 E-value=4.1e+02 Score=27.54 Aligned_cols=44 Identities=9% Similarity=0.187 Sum_probs=27.9
Q ss_pred CCCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHHH------HHHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTAE------SICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a~------~~a~~~gi~~~ 634 (787)
.+++++.++.++.++++ |++ .++.-|+++.+.. ..|+++|+...
T Consensus 12 ~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 65 (294)
T PRK14187 12 NDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSE 65 (294)
T ss_pred HHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 45667777777777766 654 3556676666543 35677777643
No 287
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=22.42 E-value=58 Score=31.85 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=34.9
Q ss_pred hhhHHHHHHHHhhC-CCEEEEEcC----CccCHHHHhhCCc-eEecCCccHHHH
Q 003909 671 PSHKRMLVEALQNQ-NEVVAMTGD----GVNDAPALKKADI-GIAMGSGTAVAK 718 (787)
Q Consensus 671 p~~K~~~v~~l~~~-~~~v~~vGD----g~ND~~ml~~A~v-gia~~~~~~~~~ 718 (787)
.-+|...++.+... -+.+.++|| |-||-|.+..+++ |+++.+-.|..+
T Consensus 160 GwDKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~DT~~ 213 (220)
T PF03332_consen 160 GWDKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPEDTIK 213 (220)
T ss_dssp T-SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHHHHH
T ss_pred CccHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEeCCHHHHHH
Confidence 34788888888764 578999999 6799999988755 999976555443
No 288
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=22.26 E-value=1.4e+02 Score=33.25 Aligned_cols=27 Identities=22% Similarity=0.204 Sum_probs=15.0
Q ss_pred cEEEecCCCccccceeeeeecCCceEEeccccc
Q 003909 146 DIVEVNVGCKIPADMRMIEMLSNQLRVDQAILT 178 (787)
Q Consensus 146 DII~l~~G~~vPaD~~il~~~~g~~~vdes~lt 178 (787)
||| ++||++.+|.-.+..-.+++|.|.
T Consensus 173 Dii------vi~Asi~vl~~g~qG~vfatSalr 199 (654)
T KOG1419|consen 173 DII------VIIASIAVLAAGSQGNVFATSALR 199 (654)
T ss_pred EEe------eeeeeeeEEEecCccceeehhhhh
Confidence 777 678888887422212234444444
No 289
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=22.25 E-value=7.4e+02 Score=28.44 Aligned_cols=36 Identities=22% Similarity=0.139 Sum_probs=23.1
Q ss_pred eCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecC
Q 003909 130 RNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS 167 (787)
Q Consensus 130 r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~ 167 (787)
.-|....+...+.+|-|-+.++- + .-+|--.+.|++
T Consensus 75 ~~GDiv~v~~G~~iP~Dg~vi~g-~-~~vdes~lTGEs 110 (556)
T TIGR01525 75 QVGDIVIVRPGERIPVDGVVISG-E-SEVDESALTGES 110 (556)
T ss_pred CCCCEEEECCCCEeccceEEEec-c-eEEeehhccCCC
Confidence 46778888888888888777763 3 235554554433
No 290
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=22.16 E-value=1.7e+02 Score=23.87 Aligned_cols=48 Identities=15% Similarity=0.033 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCC
Q 003909 89 EPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVG 153 (787)
Q Consensus 89 ~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G 153 (787)
....+++++++-..+.++.-+..+|..++.+++.. +|+|||-|....|
T Consensus 2 ~~~~l~~~vv~~~i~yf~~~rpqkK~~k~~~~m~~-----------------~L~~Gd~VvT~gG 49 (84)
T TIGR00739 2 FLTTLLPLVLIFLIFYFLIIRPQRKRRKAHKKLIE-----------------SLKKGDKVLTIGG 49 (84)
T ss_pred cHHHHHHHHHHHHHHHHheechHHHHHHHHHHHHH-----------------hCCCCCEEEECCC
No 291
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.96 E-value=2.3e+02 Score=29.29 Aligned_cols=44 Identities=14% Similarity=0.339 Sum_probs=29.1
Q ss_pred CCCChhHHHHHHHHHhC-CCE---EEEEcCCCHHHHH------HHHHHhCCCCC
Q 003909 591 DPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTAE------SICHKIGAFDH 634 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~-gi~---v~i~TGd~~~~a~------~~a~~~gi~~~ 634 (787)
.+++++.++.++.++++ |++ .++.-|+++.+.. ..|+++|+...
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 64 (293)
T PRK14185 11 AQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSS 64 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 45677778888888776 654 3566677776543 35777887653
No 292
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=21.88 E-value=7.3e+02 Score=24.91 Aligned_cols=122 Identities=14% Similarity=0.169 Sum_probs=64.0
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHH
Q 003909 597 VKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRM 676 (787)
Q Consensus 597 ~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 676 (787)
..+.++.+.+.|.++.++ |..+..+...++.+.-.. .....+ ..+| . ..|++...
T Consensus 94 ~~~ll~~~~~~~~~v~ll-G~~~~v~~~a~~~l~~~y-~l~i~g-~~~G-------------------y---f~~~e~~~ 148 (243)
T PRK03692 94 WEALMARAGKEGTPVFLV-GGKPEVLAQTEAKLRTQW-NVNIVG-SQDG-------------------Y---FTPEQRQA 148 (243)
T ss_pred HHHHHHHHHhcCCeEEEE-CCCHHHHHHHHHHHHHHh-CCEEEE-EeCC-------------------C---CCHHHHHH
Confidence 346667777889999999 666666666665553221 100000 0000 0 12445556
Q ss_pred HHHHHhhCCCEEEEEcCCccCHHHH-----h--hCCceEecCCccHHH---HhhcCeeccCCCchHHHHHHHHHHHH
Q 003909 677 LVEALQNQNEVVAMTGDGVNDAPAL-----K--KADIGIAMGSGTAVA---KSASDMVLADDNFATIVAAVAEGRAI 743 (787)
Q Consensus 677 ~v~~l~~~~~~v~~vGDg~ND~~ml-----~--~A~vgia~~~~~~~~---~~~ad~v~~~~~~~~i~~~i~~gR~~ 743 (787)
+++.+...+..++++|=|.-==+.+ + .+.+.+++|.+-|.. .+-|.-.....++.-+..++.+=|+.
T Consensus 149 i~~~I~~s~~dil~VglG~PkQE~~~~~~~~~~~~~v~~gvGg~fD~~aG~~~RAP~w~~~~gLEWlyRl~~EP~R~ 225 (243)
T PRK03692 149 LFERIHASGAKIVTVAMGSPKQEIFMRDCRLVYPDALYMGVGGTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRI 225 (243)
T ss_pred HHHHHHhcCCCEEEEECCCcHHHHHHHHHHHhCCCCEEEEeCeEEEEecCCcCcCcHHHHHhChHHHHHhHhCcHHH
Confidence 7777777777777777775421111 1 234444444321111 11233334445788888888887774
No 293
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=21.81 E-value=2.1e+02 Score=24.61 Aligned_cols=47 Identities=21% Similarity=0.264 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCC
Q 003909 90 PSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVG 153 (787)
Q Consensus 90 ~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G 153 (787)
...++.++++-..+.++.-+..+|..++.+++.. +|+|||-|.-.-|
T Consensus 4 ~~~ll~lv~i~~i~yF~~iRPQkKr~K~~~~m~~-----------------~Lk~GD~VvT~gG 50 (109)
T PRK05886 4 LVLFLPFLLIMGGFMYFASRRQRKAMQATIDLHE-----------------SLQPGDRVHTTSG 50 (109)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH-----------------hcCCCCEEEECCC
No 294
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=21.75 E-value=8.5e+02 Score=24.70 Aligned_cols=98 Identities=20% Similarity=0.347 Sum_probs=50.1
Q ss_pred CChhHHHHHHHHHhCCCEEE-EEcCCCH-HHHHHHHHHhCCCCCccccc-cccccchhhccCChHHHHHhhccceEEEec
Q 003909 593 PREEVKNAMLSCMTAGIRVI-VVTGDNK-STAESICHKIGAFDHLVDFV-GRSYTASEFEELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~-i~TGd~~-~~a~~~a~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 669 (787)
+-++..+.++.+++.|+..+ ++|-... +.++.+++...- .+++. ..-.+|.. ..
T Consensus 127 p~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~g---fIY~vs~~GvTG~~--------------------~~ 183 (258)
T PRK13111 127 PPEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASG---FVYYVSRAGVTGAR--------------------SA 183 (258)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCC---cEEEEeCCCCCCcc--------------------cC
Confidence 34677777778888887644 4666663 445555554321 11110 00011110 01
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCcc---CHHHHhhCCceEecCCc
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVN---DAPALKKADIGIAMGSG 713 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~N---D~~ml~~A~vgia~~~~ 713 (787)
.|..-.+.++.+++....-+++|-|.+ |+..+...-=|+.+|++
T Consensus 184 ~~~~~~~~i~~vk~~~~~pv~vGfGI~~~e~v~~~~~~ADGviVGSa 230 (258)
T PRK13111 184 DAADLAELVARLKAHTDLPVAVGFGISTPEQAAAIAAVADGVIVGSA 230 (258)
T ss_pred CCccHHHHHHHHHhcCCCcEEEEcccCCHHHHHHHHHhCCEEEEcHH
Confidence 233445567777665445556698885 45544443346666544
No 295
>PF12148 DUF3590: Protein of unknown function (DUF3590); InterPro: IPR021991 This domain is found in eukaryotes, and is typically between 83 and 97 amino acids in length. It is found in association with PF00097 from PFAM, PF02182 from PFAM, PF00628 from PFAM, PF00240 from PFAM. There are two conserved sequence motifs: RAR and NYN. The domain is part of the protein NIRF which has zinc finger and ubiquitinating domains. The function of this domain is likely to be mainly structural, however this has not been confirmed. ; PDB: 3DB4_A 3ASK_A 3DB3_A 2L3R_A.
Probab=21.67 E-value=45 Score=27.08 Aligned_cols=28 Identities=36% Similarity=0.395 Sum_probs=15.3
Q ss_pred eCCeEEEeecCCCCCCcEEEecCCCccc
Q 003909 130 RNGCFSILPAAELVPGDIVEVNVGCKIP 157 (787)
Q Consensus 130 r~g~~~~i~~~~Lv~GDII~l~~G~~vP 157 (787)
|--....++|++|.+|++|.+..+-.-|
T Consensus 54 RpRARt~l~w~~L~VG~~VMvNYN~d~P 81 (85)
T PF12148_consen 54 RPRARTILKWDELKVGQVVMVNYNVDEP 81 (85)
T ss_dssp EE---SBE-GGG--TT-EEEEEE-TTST
T ss_pred cceeeEeccHHhCCcccEEEEecCCCCc
Confidence 3334567899999999999998765444
No 296
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=21.35 E-value=2e+02 Score=23.32 Aligned_cols=47 Identities=19% Similarity=0.196 Sum_probs=36.2
Q ss_pred EeccCC---CCChhHHHHHHHHHhCCCEEEE-EcCCCHHHHHHHHHHhCCC
Q 003909 586 LVGMLD---PPREEVKNAMLSCMTAGIRVIV-VTGDNKSTAESICHKIGAF 632 (787)
Q Consensus 586 ~i~~~d---~~~~~~~~~i~~l~~~gi~v~i-~TGd~~~~a~~~a~~~gi~ 632 (787)
++.+.+ ...+.+.+..+.|++.|+.+.+ .++++.......|++.|+.
T Consensus 6 ii~~~~~~~~~~~~a~~~~~~Lr~~g~~v~~~~~~~~~~k~~~~a~~~g~~ 56 (94)
T cd00738 6 IVPLTDPRVEAREYAQKLLNALLANGIRVLYDDRERKIGKKFREADLRGVP 56 (94)
T ss_pred EEECCCCcHHHHHHHHHHHHHHHHCCCEEEecCCCcCHhHHHHHHHhCCCC
Confidence 344455 5667788888999999999888 4567888888888888875
No 297
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=21.35 E-value=1.1e+02 Score=26.75 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=29.7
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a 626 (787)
...-..+..+.++.+++.|.+++.+|+.........+
T Consensus 62 ~sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~a 98 (131)
T PF01380_consen 62 YSGETRELIELLRFAKERGAPVILITSNSESPLARLA 98 (131)
T ss_dssp SSSTTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHHS
T ss_pred ccccchhhhhhhHHHHhcCCeEEEEeCCCCCchhhhC
Confidence 3456688999999999999999999988776554444
No 298
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=20.79 E-value=4.4e+02 Score=21.00 Aligned_cols=21 Identities=10% Similarity=0.225 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 003909 247 KKKLDEFGTFLAKVIAGICVL 267 (787)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~ 267 (787)
|+..+++...++.+..+++++
T Consensus 6 Q~~ae~l~~~il~~~~iisfi 26 (76)
T PF06645_consen 6 QRLAEKLMQYILIISAIISFI 26 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445555555544444444333
No 299
>PLN02580 trehalose-phosphatase
Probab=20.75 E-value=1.1e+02 Score=33.02 Aligned_cols=48 Identities=13% Similarity=0.172 Sum_probs=35.6
Q ss_pred CcEEEEEeccCC--CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH
Q 003909 580 DLTFIGLVGMLD--PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK 628 (787)
Q Consensus 580 ~l~~lG~i~~~d--~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~ 628 (787)
|+++.-+..--+ .+.++.++++++|.+. ..|+|+|||+......+..-
T Consensus 127 DGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 127 DGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred CCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCC
Confidence 555554442111 3688999999999988 48999999999988876643
No 300
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=20.60 E-value=5e+02 Score=22.28 Aligned_cols=14 Identities=43% Similarity=0.525 Sum_probs=8.6
Q ss_pred CCCCCCcEEEecCC
Q 003909 140 AELVPGDIVEVNVG 153 (787)
Q Consensus 140 ~~Lv~GDII~l~~G 153 (787)
++|+|||-|....|
T Consensus 51 ~~Lk~Gd~VvT~gG 64 (106)
T PRK05585 51 SSLAKGDEVVTNGG 64 (106)
T ss_pred HhcCCCCEEEECCC
Confidence 35666666666555
No 301
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.53 E-value=1.1e+02 Score=26.89 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003909 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (787)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a 626 (787)
++..++++.++++|++++.+|+.........+
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~l~~~~ 105 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSPLAKLA 105 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCChhHHhc
No 302
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=20.42 E-value=4.5e+02 Score=27.04 Aligned_cols=142 Identities=13% Similarity=0.107 Sum_probs=81.0
Q ss_pred HHHHHHHHHhhccccchhhhhhhccCCccccCCCCCC-----------CCC---cEEEEEeccCCCCChhHHHHHHHHHh
Q 003909 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDD-----------EKD---LTFIGLVGMLDPPREEVKNAMLSCMT 606 (787)
Q Consensus 541 ~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~-----------e~~---l~~lG~i~~~d~~~~~~~~~i~~l~~ 606 (787)
.++.....+++. +||.++.++.+..|+-.....+.. ..+ ..-++++.=.-....+..+.++.|++
T Consensus 103 ~k~~~~v~~~~~-~Gy~iviiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~~~~kv~~vsQTT~~~~~~~~iv~~l~~ 181 (281)
T PRK12360 103 KKIQNIVEEYYN-KGYSIIIVGDKNHPEVIGINGWCDNSAYIVNSIEEVENIPFLDKACVVAQTTIIPELWEDILNVIKL 181 (281)
T ss_pred hHHHHHHHHHHh-CCCEEEEEcCCCCceeeEeccCcCCCeEEECCHHHHhhCccccCEEEEECCCCcHHHHHHHHHHHHH
Confidence 456666777777 999999999877664322222110 011 12355555555666677777777776
Q ss_pred CCCE------EEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHH
Q 003909 607 AGIR------VIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEA 680 (787)
Q Consensus 607 ~gi~------v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 680 (787)
..-+ ++-+|-+....++.+|+++.+.- |...-....-.++.+.
T Consensus 182 ~~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~mi-------------------------------VVGg~~SsNT~rL~ei 230 (281)
T PRK12360 182 KSKELVFFNTICSATKKRQESAKELSKEVDVMI-------------------------------VIGGKHSSNTQKLVKI 230 (281)
T ss_pred hCcccccCCCcchhhhhHHHHHHHHHHhCCEEE-------------------------------EecCCCCccHHHHHHH
Confidence 5432 45567777777777777655421 2222222333455555
Q ss_pred HhhCCCEEEEEcC-CccCHHHHhhC-CceEecCCcc
Q 003909 681 LQNQNEVVAMTGD-GVNDAPALKKA-DIGIAMGSGT 714 (787)
Q Consensus 681 l~~~~~~v~~vGD-g~ND~~ml~~A-~vgia~~~~~ 714 (787)
.++.+..+..+.+ ..-|..+|+.+ .|||.-|.++
T Consensus 231 a~~~~~~t~~Ie~~~el~~~~~~~~~~VGitaGAST 266 (281)
T PRK12360 231 CEKNCPNTFHIETADELDLEMLKDYKIIGITAGAST 266 (281)
T ss_pred HHHHCCCEEEECChHHCCHHHhCCCCEEEEEccCCC
Confidence 5555655666544 33356677644 6788877433
No 303
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=20.15 E-value=9.5e+02 Score=27.41 Aligned_cols=156 Identities=12% Similarity=0.109 Sum_probs=74.6
Q ss_pred eCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeecc
Q 003909 130 RNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGT 209 (787)
Q Consensus 130 r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt 209 (787)
.-|....+...+.+|-|-+.++- + .-+|--.+.|++...... .|+. + .. +..+..|+
T Consensus 74 ~~GDiv~v~~G~~iP~Dg~ii~g-~-~~vdes~lTGEs~pv~k~----~g~~--v--~a-------------Gt~v~~G~ 130 (536)
T TIGR01512 74 KVGDVVVVKPGERVPVDGVVLSG-T-STVDESALTGESVPVEKA----PGDE--V--FA-------------GAINLDGV 130 (536)
T ss_pred CCCCEEEEcCCCEeecceEEEeC-c-EEEEecccCCCCCcEEeC----CCCE--E--Ee-------------eeEECCce
Confidence 57889999999999999999973 2 234544444433322221 1221 1 11 12244454
Q ss_pred EEecceEEEEEEEecchhhhhHHHHHhccCCCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhH
Q 003909 210 VVVAGRARAVVVGVGANTAMGSIRDSMLQTEDE-VTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGA 288 (787)
Q Consensus 210 ~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (787)
....=...+.=+..|. +.+..+.....+.+ ....++..+.+....+.+.+++.++.++.....+ . +
T Consensus 131 ~~~~V~~~g~~t~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~ 197 (536)
T TIGR01512 131 LTIVVTKLPADSTIAK---IVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPF-W---------V 197 (536)
T ss_pred EEEEEEEeccccHHHH---HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-H---------H
Confidence 4432222222223332 22223322222222 2334555555555544444333333222211111 0 1
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 003909 289 IHYFKIAVALAVAAIPEGLPAVVTTCLALGTKR 321 (787)
Q Consensus 289 ~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~ 321 (787)
...+...+...-.++|.+.|+++..+.....++
T Consensus 198 ~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 198 YRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 122334455556778999999888887776543
No 304
>PRK06437 hypothetical protein; Provisional
Probab=20.09 E-value=1.7e+02 Score=22.63 Aligned_cols=30 Identities=17% Similarity=0.124 Sum_probs=22.1
Q ss_pred cCCCeeEEEeCCeEEEeecCCCCCCcEEEec
Q 003909 121 YQADIATVLRNGCFSILPAAELVPGDIVEVN 151 (787)
Q Consensus 121 ~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~ 151 (787)
..+..+.|.+||+... +...|..||-|.+-
T Consensus 32 i~~~~vaV~vNg~iv~-~~~~L~dgD~Veiv 61 (67)
T PRK06437 32 LDEEEYVVIVNGSPVL-EDHNVKKEDDVLIL 61 (67)
T ss_pred CCCccEEEEECCEECC-CceEcCCCCEEEEE
Confidence 4566778889998886 55567888887763
No 305
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=20.04 E-value=7.2e+02 Score=24.42 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=26.9
Q ss_pred hHHHHHHHHHhCCCEEE-EEc------------CCCHHHHHHHHHHhCCCCC
Q 003909 596 EVKNAMLSCMTAGIRVI-VVT------------GDNKSTAESICHKIGAFDH 634 (787)
Q Consensus 596 ~~~~~i~~l~~~gi~v~-i~T------------Gd~~~~a~~~a~~~gi~~~ 634 (787)
++.-++..++++|+.|+ ++| +.....++.+|+.+|+...
T Consensus 9 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~ 60 (218)
T TIGR03679 9 DSNYALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLV 60 (218)
T ss_pred HHHHHHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEE
Confidence 34456677777888774 444 3456778899999998653
Done!