BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003910
(787 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana
GN=RH24 PE=1 SV=2
Length = 760
Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/792 (74%), Positives = 669/792 (84%), Gaps = 39/792 (4%)
Query: 1 MTKRKFGFEGFNINRQTSYSFEQSQAPQRLYVPPSSRYSHDNYEDTDLDNIDYEDNDAAK 60
M+ RKFG EGF INRQTSYSFE+SQAPQRLYVPPSSR DN ED DLDNIDY +N+ A+
Sbjct: 1 MSNRKFGMEGFGINRQTSYSFERSQAPQRLYVPPSSR-GGDNSEDADLDNIDYMENEEAE 59
Query: 61 AANDTG-----NGAEKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESF 115
+ G +G E +EIDPLDAFMEGIH+EM++APPPKPKEKLERYKDDD+ DP+ES+
Sbjct: 60 EDIEEGGSAAASGGEVDEIDPLDAFMEGIHQEMKSAPPPKPKEKLERYKDDDD-DPVESY 118
Query: 116 LMAKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPAL 175
L AKKD+GLTLAADAL AGY+SDEEVYAAAKAVDAGMLDYDSDDNP+VV+K+KIEPI AL
Sbjct: 119 LKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIEPITAL 178
Query: 176 DHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQ 235
DHS IDYEP NKDFY++ SISGM+EQ+ +Y++ L IRVSGFDV RPVKTFEDCGFS+Q
Sbjct: 179 DHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQ 238
Query: 236 LMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQK 295
+M AI KQ YEKPT+IQCQALPI+LSGRD+IGIAKTGSGKTAAFVLPMIVHIMDQPELQ+
Sbjct: 239 IMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQR 298
Query: 296 EEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIAT 355
+EGPIGVICAPTRELAHQI+LE KKF+K++G+RVSAVYGGMSK +QFKELKAGCEIV+AT
Sbjct: 299 DEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVAT 358
Query: 356 PGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR 415
PGRLIDMLKMKALTM R +YLVLDEADRMFDLGFEPQ+RSIVGQIRPDRQTLLFSATMP
Sbjct: 359 PGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPW 418
Query: 416 KVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLV 475
KVEKLAREILSDP+RVTVGEVGMANEDITQVV+VIPSDAEKLPWLLEKLPGMID+GDVLV
Sbjct: 419 KVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLV 478
Query: 476 FASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLD 535
FASKK TVDEIE+QL FK AALHGDKDQASRME LQKFKSGV+HVLIATDVAARGLD
Sbjct: 479 FASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLD 538
Query: 536 IKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQ 595
IKS+K+VVN+DIA+DMDMHVHRIGRTGRAGD+DG AYTLVTQ+EARFAGELVNSL+AAGQ
Sbjct: 539 IKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQ 598
Query: 596 NVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVDFGLGIGY-TPESNNTS 654
NV EL DLAMKDGRF+SKR + GGKKG+G GG +GVRGVDFGLGIG+ + S S
Sbjct: 599 NVPPELTDLAMKDGRFKSKR-DGRKGGKKGRGGGGGNKGVRGVDFGLGIGFSSESSRTPS 657
Query: 655 SQSVPSRSAAVNSLKTGMMTQFRSNFVAASSNTPSEGFNNSASAYANKRPALRGFVSGGS 714
S++ PSRS A+NS++TG+M QF+++FVAA+ + P AY NKRP+L GFVSGG+
Sbjct: 658 SKAAPSRSGAINSVRTGVMAQFKNSFVAATPSNPQN------QAYPNKRPSLMGFVSGGT 711
Query: 715 IGGDVNGTQTTGLTGFVSGGSIGGEMSGTQTTSSFSPVSGVNSSRVNYGESAHQKNSERD 774
IGGD+ TQ S PV+ ++ + H ++SE +
Sbjct: 712 IGGDMGRTQ-----------------------SQAPPVAPTQNASSHNSSQNHSQSSE-N 747
Query: 775 RPRERRRPSGWD 786
RPRER+R SGWD
Sbjct: 748 RPRERKRRSGWD 759
>sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp.
japonica GN=Os03g0308500 PE=2 SV=1
Length = 770
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/807 (70%), Positives = 639/807 (79%), Gaps = 57/807 (7%)
Query: 1 MTKR-KFGFEGFNINRQTSYSFEQSQAPQRLYVPPSSRYSHDNYEDTDLDNIDYEDNDAA 59
M+KR K G GF+I R TSYSFE+SQ PQRLYVP +D DLD+I + D+ AA
Sbjct: 1 MSKRPKLG--GFSIPRPTSYSFERSQPPQRLYVP---------ADDPDLDDIAFSDDAAA 49
Query: 60 KAANDTGNGA----EKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESF 115
+ G ++EEIDPLDAFM I EE+RA PP E L R DDE+DP+ESF
Sbjct: 50 PSDAPPAGGGGAAGDEEEIDPLDAFMAEIQEEIRAPPPAPKPEALRRADSDDEDDPVESF 109
Query: 116 LMAKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPAL 175
L AKKD GL LAADA+ AGYDSDEEVYAAAKAVDAGM++YDSDDNP+VV+KKKIEPIP L
Sbjct: 110 LRAKKDSGLALAADAMHAGYDSDEEVYAAAKAVDAGMMEYDSDDNPIVVDKKKIEPIPPL 169
Query: 176 DHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQ 235
DHS I+YEPFNKDFY++ S+SGMSEQ+V +Y KSLAIRVSGFDVPRP+K+F DCGF Q
Sbjct: 170 DHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQ 229
Query: 236 LMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQK 295
LM+AI+KQGYEKPT+IQCQALPI+LSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPEL+K
Sbjct: 230 LMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEK 289
Query: 296 EEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIAT 355
EEGPIGV+CAPTRELAHQIYLE KKFAK + +RV+AVYGG+SK DQFKELKAGCEIVIAT
Sbjct: 290 EEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIAT 349
Query: 356 PGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR 415
PGRLID+LKMKAL M R TYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMP
Sbjct: 350 PGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPY 409
Query: 416 KVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLV 475
KVE+LAREIL+DP+RVTVG+VG ANEDI QVV+V+PSDAEK+PWLLEKLPGMIDDGDVLV
Sbjct: 410 KVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLV 469
Query: 476 FASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLD 535
FA+KK VDEIESQL Q+GF+ AALHGDKDQASRME LQKFKSGVYHVL+ATDVAARGLD
Sbjct: 470 FAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLD 529
Query: 536 IKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQ 595
IKSIK+VVNFDIA++MDMH+HRIGRTGRAGDKDGTAYTL+TQKE RFAGELV+ LIAAGQ
Sbjct: 530 IKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGELVHCLIAAGQ 589
Query: 596 NVSMELMDLAMKDGRFRSKRD------------ARKGGGKKGKGRGGAGRGVRGVDFGLG 643
+V ELMDLAMKDGRFR+ RD GGG G G G GRGVRGVDFGLG
Sbjct: 590 DVPNELMDLAMKDGRFRANRDSRKGGKKSGKGKGGGGGGGGGSGARGRGRGVRGVDFGLG 649
Query: 644 IGYTPESNNTSSQSVPS-RSAAVNSLKTGMMTQFR-SNFVAASSNTPSEGFNNSASAYAN 701
IGY N S SVP+ RSAA+NSLKTGMM F+ S A+SSNTPS + + +
Sbjct: 650 IGY-----NAESGSVPAPRSAALNSLKTGMMQNFKSSFVSASSSNTPSNSAPSRGAPSSF 704
Query: 702 KRPALRGFVSGGSIGGDVNGTQTTGLTGFVSGGSIGGEMSGTQTTSSFSPVSGVNSSRVN 761
RPALRGFVSGG+IGGD N + SF P S + V
Sbjct: 705 VRPALRGFVSGGTIGGDAN------------------QARAVLPAPSFVPASRPAENTV- 745
Query: 762 YGESAH-QKNSERDRPRERRRPSGWDR 787
E+A+ S RDR RER+RPSGWDR
Sbjct: 746 --ENANPNPESSRDRTRERKRPSGWDR 770
>sp|Q5F485|DDX42_CHICK ATP-dependent RNA helicase DDX42 OS=Gallus gallus GN=DDX42 PE=2
SV=1
Length = 944
Score = 573 bits (1476), Expect = e-162, Method: Compositional matrix adjust.
Identities = 330/753 (43%), Positives = 446/753 (59%), Gaps = 63/753 (8%)
Query: 2 TKRKFGFEGFNIN---------RQTSYS----------FEQSQAPQ--RLYVPPSSRYSH 40
TKR FGF GF I Q S+S F +S PQ Y S R +
Sbjct: 10 TKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFYKIGSKRANF 69
Query: 41 DN----YEDTDLDNIDYE------DNDAAKAANDTGNGAEKEEIDPLDAFMEGIHEEMRA 90
D +ED + DN + + +N + ++ + + DPL+AFM + ++
Sbjct: 70 DEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFNSKSADSDSDDDPLEAFMAEVEDQA-- 127
Query: 91 APPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLTLAADALRAGYDSDEEVYAAAKAVDA 150
++R +D D+E + + A R Y ++ + +
Sbjct: 128 ------ARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEA-YFR--YMAENPTAGVVQEEEE 178
Query: 151 GMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKS 210
L+YDSD NP+ KK I+P+P +DHS I+Y PF K+FY + I+ ++ Q V+E +
Sbjct: 179 DNLEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHK 238
Query: 211 LAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAK 270
L +RVSG PRP +F GF QLMH I K Y +PT IQCQ +P+ +SGRD+IGIAK
Sbjct: 239 LNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAK 298
Query: 271 TGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVS 330
TGSGKTAAF+ PM++HIMDQ EL+ +GPI VI PTREL QI+ E K+F K++ +R
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSV 358
Query: 331 AVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFE 390
AVYGG S +Q K L+ G EIV+ TPGRLID +K KA + RVTYLV DEADRMFD+GFE
Sbjct: 359 AVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFE 418
Query: 391 PQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVI 450
Q+RSI +RPDRQTLLFSAT +K+EKLAR+IL DP+RV G++G ANED+TQ+V +
Sbjct: 419 YQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIF 478
Query: 451 PSDAEKLPWLLEKLPGMIDDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRM 510
PS K WL +L G VL+F +KK +E+ + L Q+ LHGD DQ+ R
Sbjct: 479 PSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERN 538
Query: 511 EILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGT 570
+++ +FK +L+ATDVAARGLDI SIK+V+N+D+ARD+D H HRIGRTGRAG+K G
Sbjct: 539 KVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEK-GV 597
Query: 571 AYTLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGG 630
AYTL+T K++ FAG+LV +L A Q+VS EL+DLAM++ FR R KGG K GG
Sbjct: 598 AYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSR--FKGGKGKKPNIGG 655
Query: 631 AGRGVRGVDFGLGIGYTPESNNTSSQS-----VPSRSAA---VNSLKTGMMTQFRSNFVA 682
G G R GLG + NN S S PS A + ++K +Q++S+FVA
Sbjct: 656 GGLGYRERP-GLGSESSDRGNNNSVMSNYEAYKPSSGAMGDRLTAMKAAFQSQYKSHFVA 714
Query: 683 ASSNTPSEGFNNSASAYANKRPALRGFVSGGSI 715
AS N G S++A A+ G+ S GS+
Sbjct: 715 ASLNNQKTG---SSAAGAS------GWTSAGSL 738
>sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3
Length = 929
Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust.
Identities = 306/648 (47%), Positives = 405/648 (62%), Gaps = 33/648 (5%)
Query: 153 LDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLA 212
L+YDSD NP+ KK I+P+P +DHS IDY PF K+FY + I+ ++ Q +++ + L
Sbjct: 181 LEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN 240
Query: 213 IRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTG 272
+RVSG PRP +F GF QLMH I K Y +PT IQCQ +P+ LSGRD+IGIAKTG
Sbjct: 241 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG 300
Query: 273 SGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAV 332
SGKTAAF+ PM++HIMDQ EL+ +GPI VI PTREL QI+ E K+F K++ +R AV
Sbjct: 301 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV 360
Query: 333 YGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQ 392
YGG S +Q K L+ G EIV+ TPGRLID +K KA + RV+YLV DEADRMFD+GFE Q
Sbjct: 361 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ 420
Query: 393 IRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPS 452
+RSI +RPDRQTLLFSAT +K+EKLAR+IL DP+RV G++G ANED+TQ+V ++ S
Sbjct: 421 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS 480
Query: 453 DAEKLPWLLEKLPGMIDDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEI 512
K WL +L G VL+F +KK +E+ S L Q+G LHGD DQ+ R ++
Sbjct: 481 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKV 540
Query: 513 LQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAY 572
+ FK VL+ATDVAARGLDI SIK+V+N+D+ARD+D H HRIGRTGRAG+K G AY
Sbjct: 541 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEK-GVAY 599
Query: 573 TLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAG 632
TL+T K++ FAG+LV +L A Q+VS EL+DLAM++ FR R KGG K GG G
Sbjct: 600 TLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSR--FKGGKGKKLNIGGGG 657
Query: 633 RGVRGVDFGLGIGYTPESNNTSSQS-----VPSRSAA---VNSLKTGMMTQFRSNFVAAS 684
G R GLG + NN + S PS A + ++K +Q++S+FVAAS
Sbjct: 658 LGYRERP-GLGSENSDRGNNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAAS 716
Query: 685 SNTPSEGFNNSASAYANKRPALRGFVSGGSI----------GGDVNGTQTTGLTGFVSGG 734
+ G +++ ++ G+ S GS+ G + T T + G
Sbjct: 717 LSNQKAGTSSAGAS---------GWTSAGSLNSVPTNSAQQGHNSPDNPMTSSTKNIPGF 767
Query: 735 SIGGEMSGTQTTSSFSPVSGVN--SSRVNYGESAHQKNSERDRPRERR 780
+ G +S T GVN +S N E N +R+R E R
Sbjct: 768 NNSGNISSAPVTYPSIGAQGVNNTASGNNSREGIGGGNGKRERYTENR 815
>sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2
SV=1
Length = 947
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 334/785 (42%), Positives = 449/785 (57%), Gaps = 74/785 (9%)
Query: 2 TKRKFGFEGFNINRQTSYSFEQSQAPQRLYVPPSSRYSHDNYEDTDLDNIDYEDNDAAKA 61
KR FGF GF I+ + Q + SS+Y + + I +K
Sbjct: 10 NKRGFGFGGFAISTGKKEEPKLPQVSHSAFQSASSKYGSTSNQLPSFYKI------GSKR 63
Query: 62 AN-DTGNGA-EKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLMAK 119
AN D N + EE D + + I E P ++ + D EEDP+E+F+
Sbjct: 64 ANFDEENSYFDDEEEDSSNVDLPYIPAENS----PTRQQLRSKTDSDSEEDPLEAFMAEV 119
Query: 120 KDVGLTLAADALRAGYDSDEEVYAA--------------------AKAVDAGM------- 152
+D AA +R + D+E A A+ AG+
Sbjct: 120 ED----QAAKDMRKLEERDKEKANARGIRDDIEEEDDQEAYFRYMAENPTAGLVPEEEED 175
Query: 153 -LDYDSDDNPVV-VEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKS 210
L+YDSD NP+ K+ I+P+P +DH+ I+Y PF K+FY++ +I+ + Q + E +
Sbjct: 176 NLEYDSDGNPIAPTTKRIIDPLPPIDHTEIEYPPFEKNFYEEHEAITSQTPQQITELRHK 235
Query: 211 LAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAK 270
L +RVSG PR +F GF QL+H I K Y +PT IQCQ +P+ LSGRD+IGIAK
Sbjct: 236 LNLRVSGAAPPRLCSSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAK 295
Query: 271 TGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVS 330
TGSGKTAAF+ P++VHIMDQ ELQ +GPI VI PTREL QI+ E K+F K++ +R
Sbjct: 296 TGSGKTAAFIWPILVHIMDQKELQPADGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSV 355
Query: 331 AVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFE 390
AVYGG S +Q K L+ G EIV+ TPGRLID +K KA + RVTYLV DEADRMFD+GFE
Sbjct: 356 AVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFE 415
Query: 391 PQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVI 450
Q+RSI +RPDRQTLLFSAT +K+EKLAR+IL DP+RV G++G ANEDITQVV ++
Sbjct: 416 YQVRSIANHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVEIL 475
Query: 451 PSDAEKLPWLLEKLPGMIDDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRM 510
PS EK WL +L G VLVF +KK +E+ + L Q LHGD DQ+ R
Sbjct: 476 PSGPEKWTWLTRRLVEFTSTGSVLVFVTKKANAEELAANLRQDDHPLGLLHGDMDQSERN 535
Query: 511 EILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGT 570
+++ FK VL+ATDVAARGLDI SIK+VVN+D+ARD+D H HRIGRTGRAG+K G
Sbjct: 536 KVISDFKKKSIPVLVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRAGEK-GV 594
Query: 571 AYTLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGR-- 628
AYTL+T KE+ FAG+LV +L A Q VS EL+DLAM++ FR R K GKG+
Sbjct: 595 AYTLLTSKESNFAGDLVRNLEGANQYVSKELLDLAMQNSWFRKSR------FKAGKGKKL 648
Query: 629 --GGAGRGVRGVDFGLGIGYTPESNNTSSQSV-------PSRSAA---VNSLKTGMMTQF 676
GG G G R G+G + T + PS A ++++K+ +Q+
Sbjct: 649 NIGGGGLGYRERP---GLGAESSEHGTGGNVMSNYEAFKPSGGAMGDRLSAMKSAFQSQY 705
Query: 677 RSNFVAASSNTPSEGFNNSASAYANKRPALRGFVSGGSIGGDVNGTQT-----TGLTGFV 731
+++FVAAS++T G ++ S +L S G + T + GF
Sbjct: 706 KNHFVAASASTQKTGTSSINSGAWTSAGSLSSVPSAHPPSGKLPAEAAPPPVHTAMLGFT 765
Query: 732 SGGSI 736
S G++
Sbjct: 766 SSGTL 770
>sp|Q5R7D1|DDX42_PONAB ATP-dependent RNA helicase DDX42 OS=Pongo abelii GN=DDX42 PE=2 SV=1
Length = 942
Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust.
Identities = 305/642 (47%), Positives = 406/642 (63%), Gaps = 22/642 (3%)
Query: 153 LDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLA 212
L+YDSD NP+ KK I+P+P +DHS IDY PF K+FY + I+ ++ Q +++ + L
Sbjct: 181 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN 240
Query: 213 IRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTG 272
+RVSG PRP +F GF QLMH I K Y +PT IQCQ +P+ LSGRD+IGIAKTG
Sbjct: 241 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG 300
Query: 273 SGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAV 332
SGKTAAF+ PM++HIMDQ EL+ +GPI VI PTREL QI+ E K+F K++ +R AV
Sbjct: 301 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAV 360
Query: 333 YGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQ 392
YGG S +Q K L+ G EIV+ TPGRLID +K KA + RV+YLV DEADRMFD+GFE Q
Sbjct: 361 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ 420
Query: 393 IRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPS 452
+RSI +RPDRQTLLFSAT +K+EKLAR+IL DP+RV G++G ANED+TQ+V ++ S
Sbjct: 421 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS 480
Query: 453 DAEKLPWLLEKLPGMIDDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEI 512
K WL +L G VL+F +KK +E+ + L Q+G LHGD DQ+ R ++
Sbjct: 481 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV 540
Query: 513 LQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAY 572
+ FK VL+ATDVAARGLDI SIK+V+N+D+ARD+D H HRIGRTGRAG+K G AY
Sbjct: 541 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEK-GVAY 599
Query: 573 TLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAG 632
TL+T K++ FAG+LV +L A Q+VS EL+DLAM++ FR R KGG K GG G
Sbjct: 600 TLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSR--FKGGKGKKLNIGGGG 657
Query: 633 RGVRGVDFGLGIGYTPESNNTSSQSV----PSRSAA---VNSLKTGMMTQFRSNFVAASS 685
G R GLG NN + PS A + ++K +Q++S+FVAAS
Sbjct: 658 LGYRERP-GLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASL 716
Query: 686 NTPSEGFNNSASAYANKRPALRGFVSGGSIGGDVN-----GTQTTGLTGFVSGGSIGGEM 740
+ G + + ++ +L + + G + + T G+ GF G+I G +
Sbjct: 717 SNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPITSATKGIPGF---GNI-GNI 772
Query: 741 SGTQTTSSFSPVSGVN--SSRVNYGESAHQKNSERDRPRERR 780
SG T + GVN +S N E N +R+R E R
Sbjct: 773 SGAPVTYPSAGAQGVNNTASGNNSREGTGGSNGKRERYTENR 814
>sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sapiens GN=DDX42 PE=1 SV=1
Length = 938
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 281/539 (52%), Positives = 365/539 (67%), Gaps = 11/539 (2%)
Query: 153 LDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLA 212
L+YDSD NP+ KK I+P+P +DHS IDY PF K+FY + I+ ++ Q +++ + L
Sbjct: 181 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN 240
Query: 213 IRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTG 272
+RVSG PRP +F GF QLMH I K Y +PT IQCQ +P+ LSGRD+IGIAKTG
Sbjct: 241 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG 300
Query: 273 SGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAV 332
SGKTAAF+ PM++HIMDQ EL+ +GPI VI PTREL QI+ E K+F K++ +R AV
Sbjct: 301 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV 360
Query: 333 YGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQ 392
YGG S +Q K L+ G EIV+ TPGRLID +K KA + RV+YLV DEADRMFD+GFE Q
Sbjct: 361 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ 420
Query: 393 IRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPS 452
+RSI +RPDRQTLLFSAT +K+EKLAR+IL DP+RV G++G ANED+TQ+V ++ S
Sbjct: 421 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS 480
Query: 453 DAEKLPWLLEKLPGMIDDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEI 512
K WL +L G VL+F +KK +E+ + L Q+G LHGD DQ+ R ++
Sbjct: 481 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV 540
Query: 513 LQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAY 572
+ FK VL+ATDVAARGLDI SIK+V+N+D+ARD+D H HRIGRTGRAG+K G AY
Sbjct: 541 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEK-GVAY 599
Query: 573 TLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAG 632
TL+T K++ FAG+LV +L A Q+VS EL+DLAM++ FR R KGG K GG G
Sbjct: 600 TLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSR--FKGGKGKKLNIGGGG 657
Query: 633 RGVRGVDFGLGIGYTPESNNTSSQSV----PSRSAA---VNSLKTGMMTQFRSNFVAAS 684
G R GLG NN + PS A + ++K +Q++S+FVAAS
Sbjct: 658 LGYRERP-GLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAAS 715
>sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium
discoideum GN=ddx42 PE=3 SV=1
Length = 986
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 273/554 (49%), Positives = 374/554 (67%), Gaps = 14/554 (2%)
Query: 67 NGAEKEEIDPLDAFMEGIHEE--------MRAAPPPKPKEKLERYKDDDEEDPMESFLMA 118
N E +EIDPLDAFME ++ + + + K +R D+E+D + +
Sbjct: 144 NEDEDDEIDPLDAFMENVNAQAAIDNSKSIEKGQQQQQSLKSKRDDIDNEDDEEIFYKLR 203
Query: 119 KKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHS 178
+K LA + + D D + Y++ D D +S N K+ IEP+P +DHS
Sbjct: 204 QKQ----LANKSSKQQQDDDVD-YSSLDDDDGYFDDEESLKNGQSKGKRIIEPLPPIDHS 258
Query: 179 LIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMH 238
+Y FNK FY++ I+ ++E+ V E +K+L IR++G D+ PV +F GF L+
Sbjct: 259 KEEYIEFNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQ 318
Query: 239 AISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEG 298
AI+KQ E PT IQ QA+PI LSGRD+I IAKTGSGKTA F+ P I HIMDQP L+K +G
Sbjct: 319 AIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDG 378
Query: 299 PIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGR 358
PI + APTRELAHQIYLET K++K ++ + +YGG+SK Q KELKAGCEI++ATPGR
Sbjct: 379 PIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGR 438
Query: 359 LIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVE 418
LIDM+K+KA ++RV+YLVLDEAD+MFD GF PQ+ SIV +RPDRQTLLFSAT VE
Sbjct: 439 LIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKPNVE 498
Query: 419 KLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLVFAS 478
+ AR ILSDP+++++G +G AN DITQ+V V+ SD++K WL +L ++ G VL+F S
Sbjct: 499 EFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLIFVS 558
Query: 479 KKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKS 538
K V+++ S L + GF+ LHGDK+Q R + +Q FK G ++LIATDVAARGLDI
Sbjct: 559 TKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPL 618
Query: 539 IKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVS 598
IK+VVN+D +RD++ H HRIGRTGRAG+ G AYTL+T K+ F+ +L+ +L +A Q V
Sbjct: 619 IKNVVNYDTSRDIESHTHRIGRTGRAGNT-GVAYTLITPKDIHFSVDLIKNLESASQFVP 677
Query: 599 MELMDLAMKDGRFR 612
EL+D+AM + F+
Sbjct: 678 PELIDVAMNNPHFK 691
>sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp.
japonica GN=Os08g0159900 PE=2 SV=1
Length = 1049
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/581 (45%), Positives = 357/581 (61%), Gaps = 23/581 (3%)
Query: 64 DTGNGA---EKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLMA-- 118
D NGA +++EIDPLDAFM + A P ++ D +D + +
Sbjct: 265 DNANGANAMDEDEIDPLDAFMNSMVLPEVAKLESMPAANVDDKNDKSAKDAVTNGDKKGP 324
Query: 119 KKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHS 178
KK +G + + + YA + + G D D ++ V+K K E + +DHS
Sbjct: 325 KKVMGRIIQGEDSDS-------DYADDEDDEGGSEDEDDEEFMKRVKKTKAEKLAIVDHS 377
Query: 179 LIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMH 238
IDY+PF K+FY + I+ M+ ++V Y+K L ++V G DVP+P+KT+ G +++L+
Sbjct: 378 KIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLD 437
Query: 239 AISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEG 298
I K G+EKP SIQ QALPII+SGRD IGIAKTGSGKT AFVLPM+ H+ DQP + +G
Sbjct: 438 TIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDG 497
Query: 299 PIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGR 358
PIG+I APTREL QI+ + KKF+K+ GI A+YGG Q ELK G EIV+ TPGR
Sbjct: 498 PIGLIMAPTRELVVQIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRGAEIVVCTPGR 557
Query: 359 LIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR 415
+ID+L K + RVT+LV+DEADRMFD+GFEPQI IV RPDRQT+LFSAT PR
Sbjct: 558 MIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPR 617
Query: 416 KVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLV 475
+VE LAR++L+ PV + VG + N+DITQ+V V P + E+ LLE L D G +LV
Sbjct: 618 QVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPEN-ERFFRLLELLGEWFDKGKILV 676
Query: 476 FASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLD 535
F + D + L Q G+ +LHG KDQ R L FKS V +LIAT VAARGLD
Sbjct: 677 FVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAARGLD 736
Query: 536 IKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQ 595
+K ++ VVN+D+ + +VHR+GRTGRAG K G A T ++++E R+A +LV +L + Q
Sbjct: 737 VKELELVVNYDVPNHYEDYVHRVGRTGRAGRK-GFAVTFISEEEERYAPDLVKALELSEQ 795
Query: 596 NVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVR 636
V +L LA RF +K K G ++ G G G G +
Sbjct: 796 AVPEDLKGLA---DRFMAK---VKQGTEQAHGTGYGGSGFK 830
>sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana
GN=RH42 PE=1 SV=2
Length = 1166
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/570 (45%), Positives = 356/570 (62%), Gaps = 18/570 (3%)
Query: 45 DTDLDNIDYEDNDAAKAANDTGNGA-EKEEIDPLDAFMEG-----IHEEMRAAPPPKPKE 98
D D +D E+ AA + G+GA ++EEIDPLDAFM + + APPP +
Sbjct: 350 DGDAKMVDLENETAATVSESGGDGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVND 409
Query: 99 KLERYKDDDEEDPMESFLMAKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSD 158
D + + ES KK G A + G DSD + Y+ K D LD D +
Sbjct: 410 GTL----DSKMNGKESGDRPKK--GFNKALGRIIQGEDSDSD-YSEPKNDDDPSLDEDDE 462
Query: 159 DNPVVVEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGF 218
+ V+K K E + +DHS I+YEPF K+FY + IS M++++V Y+K L ++V G
Sbjct: 463 EFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGK 522
Query: 219 DVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAA 278
DVPRP+K + G +++++ + K YEKP IQ QALPII+SGRD IG+AKTGSGKT
Sbjct: 523 DVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLG 582
Query: 279 FVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSK 338
FVLPM+ HI DQP ++ +GPIG++ APTREL QI+ + +KF+K GIR VYGG
Sbjct: 583 FVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGV 642
Query: 339 LDQFKELKAGCEIVIATPGRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRS 395
Q ELK G EIV+ TPGR+ID+L K + RVT+LV+DEADRMFD+GFEPQI
Sbjct: 643 AQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITR 702
Query: 396 IVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAE 455
I+ IRP+RQT+LFSAT PR+VE LAR++L+ PV + VG + N+DITQ+V V P +++
Sbjct: 703 IIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP-ESD 761
Query: 456 KLPWLLEKLPGMIDDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQK 515
+ LLE L + G +LVF + D + + + + +LHG KDQ R +
Sbjct: 762 RFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISD 821
Query: 516 FKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLV 575
FK+ V ++LIAT VAARGLD+K ++ VVNFD + +VHR+GRTGRAG K G A T +
Sbjct: 822 FKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK-GCAVTFI 880
Query: 576 TQKEARFAGELVNSLIAAGQNVSMELMDLA 605
++ +A++A +LV +L + Q V +L LA
Sbjct: 881 SEDDAKYAPDLVKALELSEQPVPDDLKALA 910
>sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides
immitis (strain RS) GN=PRP5 PE=3 SV=1
Length = 1197
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/550 (41%), Positives = 337/550 (61%), Gaps = 23/550 (4%)
Query: 104 KDDDEEDPMESFLMAKKDVGLTLAADALRAGY----DSDEEVYAAAKAVDAGMLDYDSDD 159
+D++E DP+++F+ KD +T+ A R E ++ VD +D+++DD
Sbjct: 433 EDEEEIDPLDAFMSGLKD-SVTVDASKYRKNVSKPKQEPEAIFGDEDDVDLKAMDFEADD 491
Query: 160 NPVVVEK-KKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSG 217
+ K +K + +P ++H IDYEPF K FY + ++ +++++V + L I+V G
Sbjct: 492 FLAITSKTRKKKDLPTVNHETIDYEPFRKSFYTEPVDLAELNDEEVAALRLELDGIKVRG 551
Query: 218 FDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTA 277
DVP+PV+ + CG Q + I K GYE+PTSIQ QA+P I+SGRD+IG+AKTGSGKT
Sbjct: 552 VDVPKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTI 611
Query: 278 AFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMS 337
AF+LPM HI DQ L+ EGP+G+I PTRELA QI+ E K F K+ +R YGG
Sbjct: 612 AFLLPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAP 671
Query: 338 KLDQFKELKAGCEIVIATPGRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIR 394
DQ ELK G EI++ TPGR+ID+L + + RVTY+VLDEADRMFD+GFEPQ+
Sbjct: 672 IKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM 731
Query: 395 SIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDA 454
I+ IRP RQT+LFSAT PR +E LAR+ L+ PV + VG + ++ITQ+V V P +
Sbjct: 732 KIISNIRPSRQTVLFSATFPRNMEALARKTLTKPVEIIVGGRSVVAQEITQIVEVRPENT 791
Query: 455 EKLPWLLEKLPGMI-----DDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASR 509
K LLE L + +D L+F ++ D + L +KG+ ++HG KDQ R
Sbjct: 792 -KFVRLLELLGNLYSDDNNEDARALIFVDRQEAADGLLRDLMRKGYPCMSIHGGKDQVDR 850
Query: 510 MEILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDG 569
+ FK+G++ VLIAT VAARGLD+K +K V+N+D ++ +VHR GRTGRAG+ G
Sbjct: 851 DSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNT-G 909
Query: 570 TAYTLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRG 629
TA T +T+++ R++ ++ +L +GQ+V + + S + K G +K G
Sbjct: 910 TAVTFLTEEQERYSVDIAKALKQSGQSVPEAVQKM------VDSFLEKVKSGKEKASASG 963
Query: 630 GAGRGVRGVD 639
G+G+ +D
Sbjct: 964 FGGKGLERLD 973
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/422 (51%), Positives = 286/422 (67%), Gaps = 3/422 (0%)
Query: 185 FNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
F K+FY +S ++ M+EQDV Y+ I V G DVP+P+K F+D F ++ AI+K G
Sbjct: 125 FEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLG 184
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
+ +PT IQ Q P+ L GRD+IGIA+TGSGKT A++LP +VH+ QP L +++GPI +I
Sbjct: 185 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLIL 244
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
APTRELA QI E++KF G+R + +YGG K Q ++L+ G EIVIATPGRLIDML+
Sbjct: 245 APTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 304
Query: 365 MKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ + RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTLL+SAT PR+VE LAR+
Sbjct: 305 CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQF 364
Query: 425 LSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLVFASKKTTV 483
L DP + +G + AN+ I QV+ ++P+ EK LL L ++D +L+F K
Sbjct: 365 LRDPYKAIIGSTDLKANQSINQVIEIVPT-PEKYNRLLTLLKQLMDGSKILIFVETKRGC 423
Query: 484 DEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSVV 543
D++ QL G+ A A+HGDK Q+ R +L +FKSG ++ ATDVAARGLD+K IK VV
Sbjct: 424 DQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVV 483
Query: 544 NFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELMD 603
N+D ++ ++HRIGRTGRAG K G A+T T A+FA ELV L AGQ V L
Sbjct: 484 NYDFPNTLEDYIHRIGRTGRAGAK-GMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSA 542
Query: 604 LA 605
L
Sbjct: 543 LV 544
>sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1
Length = 1181
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/583 (41%), Positives = 343/583 (58%), Gaps = 49/583 (8%)
Query: 67 NGAEKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLTL 126
+ E+EEIDPLDAFM E+ PPK K ++ E+ P F
Sbjct: 420 DAKEEEEIDPLDAFMS----ELVETAPPK-KTTGAKFSKAKEQQPEAIF----------- 463
Query: 127 AADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDN-PVVVEKKKIEPIPALDHSLIDYEPF 185
G ++D ++ A + D+DD + + KK + IP +DH+ ++YEPF
Sbjct: 464 -------GDENDPDITAVGEG--------DADDFLAIANKAKKKKDIPKVDHAKMEYEPF 508
Query: 186 NKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
K FY + + ++ MSE ++ + L I+V G DVP+PV+ + CG Q + I + G
Sbjct: 509 RKKFYTEPSDLAQMSEGELASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDRLG 568
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
YE PTSIQ QA+P I+SGRD+IG+AKTGSGKT AF++PM HI DQ L+ EGPIG+I
Sbjct: 569 YENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRPLENMEGPIGLIM 628
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
PTRELA QI+ + K F K+ +R YGG DQ ELK G EIV+ TPGR+ID+L
Sbjct: 629 TPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLA 688
Query: 365 MKA---LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLA 421
A + RVTY+VLDEADRMFD+GFEPQ+ I+ +RPDRQT+LFSAT PR +E LA
Sbjct: 689 ANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANVRPDRQTVLFSATFPRNMEALA 748
Query: 422 REILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMI-----DDGDVLVF 476
R+ L+ PV + VG + +ITQ+V V D +K LLE L + +D L+F
Sbjct: 749 RKTLNKPVEIVVGGKSVVAPEITQIVEVRNED-KKFVRLLELLGNLYSSDENEDARALIF 807
Query: 477 ASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDI 536
++ D + +L +KG+ ++HG KDQ R ++ FK+G++ VLIAT VAARGLD+
Sbjct: 808 VERQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDV 867
Query: 537 KSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQN 596
K +K VVN+D ++ +VHR GRTGRAG+ GTA T +T+ + RF+ ++ +L +GQ
Sbjct: 868 KQLKLVVNYDAPNHLEDYVHRAGRTGRAGNT-GTAVTFLTEDQERFSVDIAKALKQSGQK 926
Query: 597 VSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
V + + S + K G +K G G+G+ +D
Sbjct: 927 VPEPVQQM------VDSFLEKVKAGKEKASASGFGGKGLERLD 963
>sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=prp5 PE=3 SV=1
Length = 1193
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/580 (41%), Positives = 339/580 (58%), Gaps = 47/580 (8%)
Query: 69 AEKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLTLAA 128
A +EE+DPLDAFM E+ PPK K R+ E+ P E+ + DV LT
Sbjct: 430 AAEEEVDPLDAFMS----ELAETAPPK-KTTGARFAKAKEQQP-EAMFGDEHDVDLTAVG 483
Query: 129 DALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKD 188
+ D+D+ + A D IPA+DH ++YEPF K
Sbjct: 484 EG-----DADD--FLAIANKAKKKKD-----------------IPAVDHEKMEYEPFRKK 519
Query: 189 FYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEK 247
FY + ++++ M++++ + L I+V G DVP+PV + CG Q + I + GYE
Sbjct: 520 FYTEPSNLAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIHRLGYEN 579
Query: 248 PTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPT 307
PTSIQ QA+P I+SGRD+IG+AKTGSGKT AF++PM HI DQ L+ EGPIG+I PT
Sbjct: 580 PTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPT 639
Query: 308 RELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKA 367
RELA QI+ + K F K+ +R YGG DQ ELK G EIV+ TPGR+ID+L A
Sbjct: 640 RELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANA 699
Query: 368 ---LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ RVTY+VLDEADRMFD+GFEPQ+ I+ IRPDRQT+LFSAT PR +E LAR+
Sbjct: 700 GRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKS 759
Query: 425 LSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMI-----DDGDVLVFASK 479
L+ P+ + VG + +ITQ+V V D K LLE L + +D L+F +
Sbjct: 760 LTKPIEIVVGGKSVVAPEITQIVEVRNEDT-KFVRLLEILGNLYSDDANEDARALIFVDR 818
Query: 480 KTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSI 539
+ D + +L +KG+ ++HG KDQ R ++ FK+G++ +LIAT VAARGLD+K +
Sbjct: 819 QEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPILIATSVAARGLDVKQL 878
Query: 540 KSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSM 599
K VVN+D ++ +VHR GRTGRAG+ GTA T +T+++ R++ ++ +L +GQ V
Sbjct: 879 KLVVNYDAPNHLEDYVHRAGRTGRAGNT-GTAVTFLTEEQERYSVDIAKALRQSGQKVPE 937
Query: 600 ELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
+ + S + K G +K G G+G+ +D
Sbjct: 938 PVQKM------VDSFLEKVKAGKEKASASGFGGKGLERLD 971
>sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2
Length = 1180
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/584 (41%), Positives = 341/584 (58%), Gaps = 51/584 (8%)
Query: 67 NGAEKEEIDPLDAFMEGIHEEMRAAPPPKPK--EKLERYKDDDEEDPMESFLMAKKDVGL 124
+ E+EEIDPLDAFM E+ + PPK K K R K E+ P E+ + D+ +
Sbjct: 418 DAQEEEEIDPLDAFMS----ELAESAPPKKKVGAKFSRTK---EQQP-EALFGDEHDIDM 469
Query: 125 TLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEP 184
T D D+D+ + A D IPA+DH ++YE
Sbjct: 470 TAVGDG-----DADD--FLAIANKAKKKKD-----------------IPAVDHKKVEYET 505
Query: 185 FNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQ 243
F K FY + + ++ MS+++ + L I+V G DVP+PV+ + CG Q + I K
Sbjct: 506 FRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDKL 565
Query: 244 GYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 303
GYEK TSIQ QA+P I+SGRD+IG+AKTGSGKT AF++PM HI DQ L EGP+G+I
Sbjct: 566 GYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLDNMEGPVGLI 625
Query: 304 CAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDML 363
PTRELA QI+ + K F K+ +R YGG DQ +LK G EI++ TPGR+ID+L
Sbjct: 626 MTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLL 685
Query: 364 KMKA---LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKL 420
A + RVTY+VLDEADRMFD+GFEPQ+ I+ IRPDRQT+LFSAT PR +E L
Sbjct: 686 AANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEAL 745
Query: 421 AREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMI-----DDGDVLV 475
AR+ L+ P+ + VG + +ITQ+V V +D +K LLE L + +D L+
Sbjct: 746 ARKTLTKPIEIVVGGKSVVAPEITQIVEVR-NDDQKFVRLLELLGNLYSSDENEDARALI 804
Query: 476 FASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLD 535
F ++ D + +L +KG+ ++HG KDQ R ++ FK+G++ VLIAT VAARGLD
Sbjct: 805 FVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLD 864
Query: 536 IKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQ 595
+K +K VVN+D ++ +VHR GRTGRAG+ GTA T +T+ + R++ ++ +L +GQ
Sbjct: 865 VKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNT-GTAVTFLTEDQERYSVDIAKALKQSGQ 923
Query: 596 NVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
V + L F K K G +K G G+G+ +D
Sbjct: 924 KVPEPVQKLV---DAFLEK---VKAGKEKASASGFGGKGLERLD 961
>sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=prp5 PE=3 SV=1
Length = 1211
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/601 (40%), Positives = 344/601 (57%), Gaps = 49/601 (8%)
Query: 50 NIDYEDNDAAKAANDTGN--GAEKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDD 107
N D E ND A A +EE+DPLDAFM E+ PPK K R+
Sbjct: 427 NGDVEMNDVPHQAESEKMEVDAAEEEVDPLDAFMS----ELAETAPPK-KTTGARFTKAK 481
Query: 108 EEDPMESFLMAKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKK 167
++ P E+ + DV LT + D+D+ + A D
Sbjct: 482 DQQP-EAMFGDEHDVDLTAVGEG-----DADD--FLAIANKAKKKKD------------- 520
Query: 168 KIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKT 226
IP +DH ++YEPF K FY + ++++ M++++ + L I+V G DVP+PV
Sbjct: 521 ----IPTVDHEKMEYEPFRKKFYTEPSNLAEMTDEEAASLRLELDGIKVRGVDVPKPVMK 576
Query: 227 FEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVH 286
+ CG Q + I K GYE PTSIQ QA+P I+SGRD+IG+AKTGSGKT AF++PM H
Sbjct: 577 WSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRH 636
Query: 287 IMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELK 346
I DQ L+ EGPIG+I PTRELA QI+ + K F K+ +R YGG DQ ELK
Sbjct: 637 IRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELK 696
Query: 347 AGCEIVIATPGRLIDMLKMKA---LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPD 403
G EIV+ TPGR+ID+L A + RVTY+VLDEADRMFD+GFEPQ+ I+ IRPD
Sbjct: 697 RGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPD 756
Query: 404 RQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEK 463
RQT+LFSAT PR +E LAR+ L+ P+ + VG + +ITQ+V V D K LLE
Sbjct: 757 RQTVLFSATFPRNMEALARKSLTKPIEIVVGGKSVVAPEITQIVEVRNEDT-KFVRLLEI 815
Query: 464 LPGMI-----DDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKS 518
L + +D L+F ++ D + +L +KG+ ++HG KDQ R ++ FK+
Sbjct: 816 LGNLYSDDANEDARALIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKA 875
Query: 519 GVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQK 578
G++ VLIAT VAARGLD+K +K VVN+D ++ +VHR GRTGRAG+ GTA T +T++
Sbjct: 876 GIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNT-GTAVTFLTEE 934
Query: 579 EARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGV 638
+ R++ ++ +L +GQ V + + S + K G +K G G+G+ +
Sbjct: 935 QERYSVDIAKALRQSGQKVPEPVQKM------VDSFLEKVKAGKEKASASGFGGKGLERL 988
Query: 639 D 639
D
Sbjct: 989 D 989
>sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp.
japonica GN=Os01g0911100 PE=2 SV=2
Length = 666
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/451 (49%), Positives = 295/451 (65%), Gaps = 12/451 (2%)
Query: 184 PFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQ 243
PF K+FY + ++ MS+ DV +Y++ I V G DVP+PV+ F++ F M AI+K
Sbjct: 210 PFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKS 269
Query: 244 GYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 303
G+ +PT IQ Q P+ L GRD+IGIA+TGSGKT +++LP +VH+ QP L++ +GPI +I
Sbjct: 270 GFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLI 329
Query: 304 CAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDML 363
APTRELA QI E+ KF R + +YGG K Q ++L+ G EIVIATPGRLIDML
Sbjct: 330 LAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDML 389
Query: 364 KMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLARE 423
+ + RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL +SAT PR+VE LAR+
Sbjct: 390 EGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQ 449
Query: 424 ILSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLVFASKKTT 482
L +P +V +G + AN I Q++ VI S+ EK P L + L ++D +L+F K
Sbjct: 450 FLQNPYKVIIGSPDLKANHSIQQIIEVI-SEHEKYPRLSKLLSDLMDGSRILIFFQTKKD 508
Query: 483 VDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSV 542
D++ QL G+ A ++HGDK QA R +L +FKSG ++ ATDVAARGLD+K IK V
Sbjct: 509 CDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCV 568
Query: 543 VNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELM 602
+NFD ++ ++HRIGRTGRAG GTA+T T A+F+ LV L AGQ V+ L
Sbjct: 569 INFDFPTTLEDYIHRIGRTGRAG-ASGTAFTFFTLSNAKFSRNLVKILREAGQVVNPALE 627
Query: 603 DLAMKDGRFRSKRDARKGGGK-KGKGRGGAG 632
+A K + GGG + +GRGG G
Sbjct: 628 SMA--------KSASSMGGGNFRSRGRGGFG 650
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/421 (51%), Positives = 289/421 (68%), Gaps = 3/421 (0%)
Query: 185 FNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
F K+FY +S S++GM+E++V Y++ I V G DVP+PV+ F D GF ++ I+K G
Sbjct: 51 FEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAG 110
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
+ +PT IQ Q P+ L GRD+IGIA+TGSGKT A++LP IVH+ QP L +GPI ++
Sbjct: 111 FVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVL 170
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
APTRELA QI E KF S I+ + +YGG+ K Q ++L+ G EIVIATPGRLIDM++
Sbjct: 171 APTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIE 230
Query: 365 MKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ RVTYLVLDEADRM D+GFEPQI+ IV QIRPDRQTL +SAT P++VE+LAR
Sbjct: 231 SHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNF 290
Query: 425 LSDPVRVTVG-EVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLVFASKKTTV 483
L DP +V +G E AN I+Q V ++ S+++K L+ L ++D +L+F K
Sbjct: 291 LFDPYKVIIGSEELKANHAISQHVEIL-SESQKYNKLVNLLEDIMDGSRILIFMDTKKGC 349
Query: 484 DEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSVV 543
D+I QL G+ A ++HGDK QA R +L +FKSG ++ ATDVAARGLD+K +K V+
Sbjct: 350 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVI 409
Query: 544 NFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELMD 603
N+D ++ +VHRIGRTGRAG K GTAYT T ARFA +L+N L AGQ VS EL +
Sbjct: 410 NYDFPGSLEDYVHRIGRTGRAGAK-GTAYTFFTAANARFAKDLINILEEAGQKVSPELAN 468
Query: 604 L 604
+
Sbjct: 469 M 469
>sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia
fuckeliana (strain B05.10) GN=prp5 PE=3 SV=1
Length = 1151
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/578 (42%), Positives = 344/578 (59%), Gaps = 47/578 (8%)
Query: 70 EKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPME-SFLMAKKDVGLTLAA 128
E EEIDPLDAFME + + P PK KD+ + P E L DV L A
Sbjct: 427 EDEEIDPLDAFMEEMGD-----PFSLPKNNATFIKDNIKSQPQEPEPLFGDDDVDLK-AL 480
Query: 129 DALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKD 188
DA D DE + A KA +K + IP +++S +D PF K+
Sbjct: 481 DA-----DPDEILAIANKA-------------------RKKKDIPTINYSALDLPPFRKN 516
Query: 189 FYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEK 247
FY + ++ M+E ++ + + L I+V+G DVP+PV+ + CG + + I+K GYE+
Sbjct: 517 FYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVITKLGYER 576
Query: 248 PTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPT 307
PTSIQ QA+P I+SGRD+IG+AKTGSGKT AF+LPM HI DQ L+ +GPIG+I PT
Sbjct: 577 PTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPT 636
Query: 308 RELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKM-- 365
RELA QI+ E K F K+ G+R YGG DQ +LK G EI++ TPGR+I++L
Sbjct: 637 RELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANS 696
Query: 366 -KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ + RVTY+VLDEADRMFD+GFEPQ+ + IRP+RQT+LFSATMPR ++ LA++
Sbjct: 697 GRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSATMPRIMDALAKKT 756
Query: 425 LSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMI---DDGDVLVFASKKT 481
L PV + VG + +ITQ+V V + EK LLE L + +D L+F ++
Sbjct: 757 LQSPVEIVVGGRSVVAPEITQIVEVR-EEKEKFHRLLELLGELYNTDEDARTLIFVDRQE 815
Query: 482 TVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKS 541
D++ L +KG+ ++HG KDQ R + FK+GV ++IAT VAARGLD+K +K
Sbjct: 816 KADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKL 875
Query: 542 VVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMEL 601
VVNFD ++ +VHR GRTGRAG+ GTA T +T+++ +++ + +L +GQ V L
Sbjct: 876 VVNFDAPNHLEDYVHRAGRTGRAGNT-GTAVTFITEEQEQYSVGIAKALEQSGQEVPDRL 934
Query: 602 MDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
++ +S +D K G KK + G G+G+ D
Sbjct: 935 NEMR------KSYKDKVKSGAKK-ESSGFRGKGLERFD 965
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP2 PE=3 SV=1
Length = 544
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/477 (46%), Positives = 310/477 (64%), Gaps = 13/477 (2%)
Query: 131 LRAGYDSDEEVYAAAK--AVDAGMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKD 188
R G SD Y + G L DD P + K P + L + PF K+
Sbjct: 20 FRGGRSSDRNDYNRDRNQGYSHGGLRGRHDDGPRELIK------PDWESELPNLPPFEKN 73
Query: 189 FYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKP 248
FY + + S+Q+V +++K + ++G D+P+P+ TF++ GF ++ + +G++KP
Sbjct: 74 FYVEHEVVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKP 133
Query: 249 TSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTR 308
TSIQCQ P+ LSGRD++GIA TGSGKT ++ LP IVHI QP L +GPI ++ APTR
Sbjct: 134 TSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTR 193
Query: 309 ELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKAL 368
ELA QI E KF KS IR + VYGG+ + Q +EL G EIVIATPGRLIDML+
Sbjct: 194 ELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKT 253
Query: 369 TMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDP 428
+ RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL++SAT P++V++LAR+ L+DP
Sbjct: 254 NLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDP 313
Query: 429 VRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGD--VLVFASKKTTVDE 485
++V +G + + A+ +ITQ+V V+ S+ EK L++ L D + +L+FAS K T DE
Sbjct: 314 IQVQIGSLELAASHNITQLVEVV-SEFEKRDRLVKHLDTASQDKESKILIFASTKRTCDE 372
Query: 486 IESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNF 545
I S L Q G+ A A+HGDKDQ R +L +F++G +++ATDVAARG+D+K I VVN+
Sbjct: 373 ITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNY 432
Query: 546 DIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELM 602
D+ +++ +VHRIGRTGRAG GTA + T+ L++ + A QN+ ELM
Sbjct: 433 DMPGNIEDYVHRIGRTGRAG-ATGTAISFFTEDNKSLGASLISIMREAKQNIPEELM 488
>sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=prp5 PE=3 SV=1
Length = 1173
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/580 (40%), Positives = 339/580 (58%), Gaps = 49/580 (8%)
Query: 69 AEKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLTLAA 128
A++EE+DPLDAFM E+ + PPK K + K ++P E+ + DV +T
Sbjct: 416 AQEEELDPLDAFMS----ELAESAPPKKKAGAKFSK---AQEP-EAIFGDEHDVSMTAVG 467
Query: 129 DALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKD 188
+ D E + A + D IP +DH+ ++YEPF +
Sbjct: 468 EG-------DAEDFLAIASKAKKKKD-----------------IPTVDHNKVEYEPFRRK 503
Query: 189 FYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEK 247
FY + + ++ MSE++ + L I+V G DVP+PV+ + CG Q + I K G+
Sbjct: 504 FYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFAS 563
Query: 248 PTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPT 307
TSIQ QA+P I+SGRD+IG+AKTGSGKT AF++PM HI DQ L+ EGPIG+I PT
Sbjct: 564 LTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPT 623
Query: 308 RELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKMKA 367
RELA QI+ + K F K+ +R YGG DQ ELK G EI++ TPGR+ID+L A
Sbjct: 624 RELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANA 683
Query: 368 ---LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ RVTY+VLDEADRMFD+GFEPQ+ I+ +RPDRQT+LFSAT PR +E LAR+
Sbjct: 684 GRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNMEALARKT 743
Query: 425 LSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMI-----DDGDVLVFASK 479
L+ P+ + VG + +ITQ+V V ++ +K LLE L + +D L+F +
Sbjct: 744 LTKPIEIVVGGRSVVAPEITQIVEVC-NEEKKFVRLLELLGNLYSTDENEDARSLIFVDR 802
Query: 480 KTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSI 539
+ D + +L +KG+ ++HG KDQ R ++ FK+G++ VLIAT VAARGLD+K +
Sbjct: 803 QEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQL 862
Query: 540 KSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSM 599
K VVN+D ++ +VHR GRTGRAG+ GTA T +T+ + R++ ++ +L +GQ V
Sbjct: 863 KLVVNYDAPNHLEDYVHRAGRTGRAGNT-GTAVTFLTEDQERYSVDIAKALKQSGQEVPE 921
Query: 600 ELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
+ L S + K G +K G G+G+ +D
Sbjct: 922 AVQKL------VDSFLEKVKAGKEKASNSGFGGKGLERLD 955
>sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prp5 PE=3 SV=1
Length = 1186
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/582 (40%), Positives = 338/582 (58%), Gaps = 47/582 (8%)
Query: 67 NGAEKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLTL 126
+ E+EE+DPLDAFM E+ + PPK K ++ + P E+ + D+ +T
Sbjct: 425 DAQEEEEVDPLDAFMS----ELAESAPPK-KTAGAKFAKAKPQQP-EALFGDENDMDMTA 478
Query: 127 AADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFN 186
D D+D+ + A D IP +DH ++YEPF
Sbjct: 479 VGDG-----DADD--FLAIANKAKKKKD-----------------IPTVDHKKVEYEPFR 514
Query: 187 KDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGY 245
K FY + + ++ MSE++ + L I+V G +VPRPV + CG Q + I + GY
Sbjct: 515 KKFYTEPSDLAAMSEEEAASLRLELDGIKVRGVEVPRPVSKWSQCGLGVQTLDVIDRLGY 574
Query: 246 EKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICA 305
PTSIQ QA+P I+SGRD+IG+AKTGSGKT AF++PM HI DQ L+ EGP+G+I
Sbjct: 575 SAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLENMEGPVGLIMT 634
Query: 306 PTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKM 365
PTRELA QI+ + K F K+ +R YGG DQ +LK G EI++ TPGR+ID+L
Sbjct: 635 PTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAA 694
Query: 366 KA---LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAR 422
A + RVTY+VLDEADRMFD+GFEPQ+ I+ +RPD+QT+LFSAT PR +E LAR
Sbjct: 695 NAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILANVRPDKQTVLFSATFPRNMEALAR 754
Query: 423 EILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMI-----DDGDVLVFA 477
+ L+ PV + VG + +ITQ+V V D +K LLE L + +D L+F
Sbjct: 755 KTLNKPVEIVVGGRSVVAPEITQIVEVRSED-KKFIRLLELLGNLYSTDENEDARALIFV 813
Query: 478 SKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIK 537
++ D + +L +KG+ ++HG KDQ R ++ FK+G++ VLIAT VAARGLD+K
Sbjct: 814 ERQEGADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVK 873
Query: 538 SIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNV 597
+K VVN+D ++ +VHR GRTGRAG+ GTA T +T+ + R++ ++ +L +GQ+V
Sbjct: 874 QLKLVVNYDAPNHLEDYVHRAGRTGRAGNT-GTAVTFLTEDQERYSVDIAKALKQSGQSV 932
Query: 598 SMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
+ + S + K G +K G G+G+ +D
Sbjct: 933 PEPVQKM------VDSFLEKVKAGKEKASASGFGGKGLERLD 968
>sp|A7ENE0|PRP5_SCLS1 Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp5
PE=3 SV=1
Length = 1114
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/598 (40%), Positives = 350/598 (58%), Gaps = 49/598 (8%)
Query: 50 NIDYEDNDAAKAANDTGNGAEKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEE 109
N D DA +A D+ E EEIDPLDAFME + + P PK K++ +
Sbjct: 338 NGDVHMEDAPQA--DSTAMDEDEEIDPLDAFMEEMGD-----PFSLPKSNTTFVKNNTKS 390
Query: 110 DPMESFLMAKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEK-KK 168
P E A + D+ VD LD D D+ + K +K
Sbjct: 391 QPQEP-----------------EALFGDDD--------VDLKALDADPDEILAIANKARK 425
Query: 169 IEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTF 227
+ IP ++++ ++ PF K+FY + A + M+E ++ + + L I+V+G DVP+PV+ +
Sbjct: 426 KKDIPTINYANLNLPPFRKNFYTEPAELVDMTEAEINDLRLELDGIKVAGKDVPKPVQKW 485
Query: 228 EDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHI 287
CG + + I K GY+KPTSIQ QA+P I+SGRD+IG+AKTGSGKT AF+LPM HI
Sbjct: 486 SQCGLDVKSLDVIKKLGYDKPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHI 545
Query: 288 MDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKA 347
DQ L+ +GPIG+I PTRELA QI+ E K F K+ G+R YGG DQ +LK
Sbjct: 546 RDQRPLKNSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKR 605
Query: 348 GCEIVIATPGRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDR 404
G EI++ TPGR+I++L + + RVTY+VLDEADRMFD+GFEPQ+ + IRP+R
Sbjct: 606 GAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPNR 665
Query: 405 QTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKL 464
QT+LFSATMPR ++ LA++ L PV + VG + +ITQ+V V + EK LLE L
Sbjct: 666 QTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEV-REEKEKFHRLLELL 724
Query: 465 PGMI---DDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVY 521
+ +D L+F ++ D++ L +KG+ ++HG KDQ R + FK+GV
Sbjct: 725 GELYNADEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGVV 784
Query: 522 HVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEAR 581
++IAT VAARGLD+K +K VVNFD ++ +VHR GRTGRAG+ GTA T +T+++ +
Sbjct: 785 PIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNT-GTAVTFITEEQEQ 843
Query: 582 FAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
++ + +L +GQ V L ++ +S +D K G KK + G G+G+ D
Sbjct: 844 YSVGIAKALEQSGQEVPERLNEMR------KSYKDKVKSGAKK-ESSGFGGKGLERFD 894
>sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp11 PE=3 SV=1
Length = 1014
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/619 (39%), Positives = 345/619 (55%), Gaps = 76/619 (12%)
Query: 7 GFEGFNINRQTSYS---------FEQSQAPQRLYVPPSSRYSHDNYEDTDLDNIDYEDND 57
G GF INRQ S + P+R+ + ++Y++ ++ D
Sbjct: 240 GISGFEINRQKDTSDMKRNNRVHMDDEDGPRRMNL--------EDYQEL------WDQED 285
Query: 58 AAKAANDTGNGAEKEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLM 117
N+ E++E+DPLDA+M +
Sbjct: 286 RGMLGNEQAASMEEDEVDPLDAYMASL--------------------------------- 312
Query: 118 AKKDVGLTLAADALRAGYDSDEEVYAAA----KAVDAGMLDYDSDDNPVVVEKKKIEPIP 173
VG T D +R G + E + A + V + L+ + + + ++ K + +
Sbjct: 313 ----VGTT---DTIRPGLLNTEVIDPNANDDERMVISETLEEEENLLALAAKRSKKKDVI 365
Query: 174 ALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGF 232
+DHS I+YE F KDFY + + +S +V E + SL I++ G D P+PV ++ CG
Sbjct: 366 TVDHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGL 425
Query: 233 STQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE 292
S Q + I+ GYEKPTSIQ QA+P I SGRD+IG+AKTGSGKT AF+LPM HI DQ
Sbjct: 426 SAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRP 485
Query: 293 LQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIV 352
L+ EGPI +I PTRELA QI+ E K F K IR YGG DQ +LK G EIV
Sbjct: 486 LKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIV 545
Query: 353 IATPGRLIDMLKMKA---LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLF 409
+ TPGR+ID+L A + R TYLVLDEADRMFDLGFEPQ+ I+ IRPDRQT+LF
Sbjct: 546 VCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLF 605
Query: 410 SATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMID 469
SAT PR +E LAR++L PV +TVG + ++ Q+V V P ++ K LLE L + +
Sbjct: 606 SATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEES-KFSRLLELLGELYN 664
Query: 470 ---DGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIA 526
D LVF ++ + D + S L ++G+ + ++HG KDQ R + +K+GV+ VLIA
Sbjct: 665 NQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIA 724
Query: 527 TDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGEL 586
T V ARGLD+KS++ VVN+D M+ +VHR+GRTGRAG G A T +T ++ ++A ++
Sbjct: 725 TSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAG-HTGVAVTFITPEQEKYAVDI 783
Query: 587 VNSLIAAGQNVSMELMDLA 605
+L + Q V EL LA
Sbjct: 784 AKALKMSKQPVPKELQTLA 802
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/422 (50%), Positives = 288/422 (68%), Gaps = 3/422 (0%)
Query: 184 PFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQ 243
PF K+FY +S +++ M++ +V EY+K I V G D+P+PVK+F D GF ++ + K
Sbjct: 58 PFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKA 117
Query: 244 GYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 303
G+ +PT IQ Q P+ + GRD+IGIA+TGSGKT +++LP IVH+ QP L +GPI ++
Sbjct: 118 GFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLV 177
Query: 304 CAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDML 363
APTRELA QI E KF S I+ + +YGG+ K Q ++L+ G EIVIATPGRLIDM+
Sbjct: 178 LAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMM 237
Query: 364 KMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLARE 423
+ + RVTYLVLDEADRM D+GF+PQIR IV IRPDRQTL +SAT P++VE+L+++
Sbjct: 238 ESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKK 297
Query: 424 ILSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLVFASKKTT 482
L +P +V +G + AN I Q+V VI S+++K L++ L ++D +LVF K
Sbjct: 298 FLYNPYKVIIGSSDLKANRAIRQIVDVI-SESQKYNKLVKLLEDIMDGSRILVFLDTKKG 356
Query: 483 VDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSV 542
D+I QL G+ A ++HGDK QA R +L +F+SG ++ ATDVAARGLD+K +K V
Sbjct: 357 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYV 416
Query: 543 VNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELM 602
+N+D ++ +VHRIGRTGRAG K GTAYT T ARFA EL N L AGQ VS EL
Sbjct: 417 INYDFPGSLEDYVHRIGRTGRAGAK-GTAYTFFTVANARFAKELTNILQEAGQKVSPELA 475
Query: 603 DL 604
+
Sbjct: 476 SM 477
>sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella
zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL
31084) GN=PRP5 PE=3 SV=2
Length = 1207
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/576 (39%), Positives = 336/576 (58%), Gaps = 19/576 (3%)
Query: 71 KEEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLTLAADA 130
+EE P D G A P+P ++E ++D+ DP+++F+ K +
Sbjct: 422 EEETKPTDVETNGDVAMNNNASQPEPATQME-VDEEDDVDPLDAFMADLKQTDVRQPTKT 480
Query: 131 LRAGYDSDEEVYAAAKAVDAGMLDY-DSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKDF 189
+ E Y + D D D+ + K+K + IP +D+S I+ EP K+F
Sbjct: 481 STTQKIQEPEAYFSDDEYDFNKKDEGDASALLAITAKRKKKDIPTIDYSKIEIEPIRKNF 540
Query: 190 YQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKP 248
+ + A +S ++E +V + + L I+V+G DVP+PV+ + CG + Q + + GYEKP
Sbjct: 541 WHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKP 600
Query: 249 TSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTR 308
T IQ QALP ++SGRD+IG+AKTGSGKT AF+LPM HI DQP L+ +GPIG+I PTR
Sbjct: 601 TPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTR 660
Query: 309 ELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKM--- 365
ELA QI+ + K F K G+R YGG +Q ELK G EI++ TPGR+ID+L
Sbjct: 661 ELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQG 720
Query: 366 KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREIL 425
+ + RVTY+VLDEADRMFD+GFEPQ+ I +RPDRQT+LFSATMPR ++ L +++L
Sbjct: 721 RVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVL 780
Query: 426 SDPVRVTVGEVGMANEDITQVVHVI--PSDAEKLPWLLEKLPGMIDDGDVLVFASKKTTV 483
+P+ VTVG + ++I Q+V V PS ++ LL +L +D L+F ++
Sbjct: 781 KNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGELYDRDEDARTLIFVERQEKA 840
Query: 484 DEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSVV 543
D++ +L KG+ ++HG KDQ R + FK GV +LIAT VAARGLD+K +K V+
Sbjct: 841 DDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVI 900
Query: 544 NFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELMD 603
N+D ++ +VHR GRTGRAG+ G A T VT ++ A + +L +GQ +
Sbjct: 901 NYDAPNHLEDYVHRAGRTGRAGNT-GVAVTFVTPEQENCAPGIAKALEQSGQPIP----- 954
Query: 604 LAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
R R A + K GK + +G G +G+D
Sbjct: 955 -----DRLNEMRKAHREKVKSGKAKDTSGFGGKGLD 985
>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus
GN=Ddx46 PE=1 SV=1
Length = 1032
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/576 (43%), Positives = 344/576 (59%), Gaps = 29/576 (5%)
Query: 66 GNGAEKEEIDPLDAFMEGIHEE-----MRAAPPPKPKEKL---ERYKDDDEEDPMESFLM 117
GN E EE+DPLDA+ME + EE MR+ EK K ++ +
Sbjct: 217 GNEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVD 276
Query: 118 AKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDH 177
A K G + D Y S+EE + + Y + ++K +EP+ DH
Sbjct: 277 ADKKKGELMENDQDAMEYSSEEEEV----DLQTALTGYQTK------QRKLLEPV---DH 323
Query: 178 SLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQL 236
I+YEPF K+FY + ++ MS+++V ++ + I V G P+P+K++ CG S ++
Sbjct: 324 GKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKI 383
Query: 237 MHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE 296
++++ K GYEKPT IQ QA+P I+SGRD+IGIAKTGSGKT AF+LPM HIMDQ L++
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEG 443
Query: 297 EGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATP 356
EGPI VI PTRELA QI E KKF+K+ G+RV VYGG +Q ELK G EI++ TP
Sbjct: 444 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP 503
Query: 357 GRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATM 413
GR+IDML + + RVTY+VLDEADRMFD+GFEPQ+ IV +RPDRQT++FSAT
Sbjct: 504 GRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATF 563
Query: 414 PRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDV 473
PR +E LAR ILS P+ V VG + D+ Q V VI + + L LLE L + G V
Sbjct: 564 PRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK-LLELLGHYQESGSV 622
Query: 474 LVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARG 533
++F K+ D + L + + +LHG DQ R I+ FK+G +L+AT VAARG
Sbjct: 623 IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARG 682
Query: 534 LDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAA 593
LD+K + VVN+ + +VHR GRTGRAG+K G AYT +T+ +AR+AG+++ +L +
Sbjct: 683 LDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNK-GYAYTFITEDQARYAGDIIKALELS 741
Query: 594 GQNVSMELMDLA--MKDGRFRSKRDARKGGGKKGKG 627
G V +L L KD + + +K G GKG
Sbjct: 742 GTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKG 777
>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46
PE=2 SV=1
Length = 1018
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/576 (42%), Positives = 338/576 (58%), Gaps = 37/576 (6%)
Query: 74 IDPLDAFMEGIHEE--------MRAAPPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLT 125
+DPLDA+ME + EE M+ A K + + + M A K G
Sbjct: 196 VDPLDAYMEEVKEEVKKFNMGTMKGANDKKGGMSVTKVVTVVKTKKMPH---ATKKKGEL 252
Query: 126 LAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPF 185
+ D Y S+EE A+ ++K +EP+ DH I YEPF
Sbjct: 253 MENDQDAMEYSSEEEEVDLQTALTGFQTK----------QRKVLEPV---DHQKIQYEPF 299
Query: 186 NKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
K+FY + ++ MS ++V EY+ L I V G P+P+KT+ CG S ++++A+ K
Sbjct: 300 RKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHN 359
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
YEKPT IQ QA+P I+SGRD+IGIAKTGSGKT AF+LPM HI+DQ + + EGP+ VI
Sbjct: 360 YEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIM 419
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
PTRELA QI E KKF+KS +RV VYGG +Q ELK G EI++ TPGR+IDML
Sbjct: 420 TPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLG 479
Query: 365 M---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLA 421
+ + RVTY+V+DEADRMFD+GFEPQ+ IV +RPDRQT++FSAT PR +E LA
Sbjct: 480 ANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALA 539
Query: 422 REILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLVFASKKT 481
R ILS PV V VG + D+ Q V VI + +K LLE L + G V++F K+
Sbjct: 540 RRILSKPVEVQVGGRSVVCSDVEQHVIVI-EEEKKFLKLLEILGHYQEKGSVIIFVDKQE 598
Query: 482 TVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKS 541
D + L + + +LHG DQ R I+ FK+G +L+AT VAARGLD+K +
Sbjct: 599 HADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLIL 658
Query: 542 VVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMEL 601
VVN+ + +VHR GRTGRAG+K G AYT +T+ +AR++G+++ +L +G +V EL
Sbjct: 659 VVNYSCPNHYEDYVHRAGRTGRAGNK-GYAYTFITEGQARYSGDILKALELSGSSVPAEL 717
Query: 602 MDLAMKDGRFRSKRDARKGGGKKGKGRGG-AGRGVR 636
L + + ++ +K GK K G +G+G +
Sbjct: 718 EQL------WTNFKEQQKAEGKIIKSSSGFSGKGFK 747
>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46
PE=1 SV=2
Length = 1031
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/576 (43%), Positives = 344/576 (59%), Gaps = 29/576 (5%)
Query: 66 GNGAEKEEIDPLDAFMEGIHEE-----MRAAPPPKPKEKLE---RYKDDDEEDPMESFLM 117
GN E EE+DPLDA+ME + EE MR+ EK K ++ +
Sbjct: 217 GNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVD 276
Query: 118 AKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDH 177
+ K G + D Y S+EE A+ Y + ++K +EP+ DH
Sbjct: 277 SDKKKGELMENDQDAMEYSSEEEEVDLQTALTG----YQTK------QRKLLEPV---DH 323
Query: 178 SLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQL 236
I+YEPF K+FY + ++ MS+++V ++ + I V G P+P+K++ CG S ++
Sbjct: 324 GKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKI 383
Query: 237 MHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE 296
++++ K GYEKPT IQ QA+P I+SGRD+IGIAKTGSGKT AF+LPM HIMDQ L++
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEG 443
Query: 297 EGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATP 356
EGPI VI PTRELA QI E KKF+K+ G+RV VYGG +Q ELK G EI++ TP
Sbjct: 444 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP 503
Query: 357 GRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATM 413
GR+IDML + + RVTY+VLDEADRMFD+GFEPQ+ IV +RPDRQT++FSAT
Sbjct: 504 GRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATF 563
Query: 414 PRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDV 473
PR +E LAR ILS P+ V VG + D+ Q V VI + + L LLE L + G V
Sbjct: 564 PRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK-LLELLGHYQESGSV 622
Query: 474 LVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARG 533
++F K+ D + L + + +LHG DQ R I+ FK+G +L+AT VAARG
Sbjct: 623 IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARG 682
Query: 534 LDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAA 593
LD+K + VVN+ + +VHR GRTGRAG+K G AYT +T+ +AR+AG+++ +L +
Sbjct: 683 LDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNK-GYAYTFITEDQARYAGDIIKALELS 741
Query: 594 GQNVSMELMDLA--MKDGRFRSKRDARKGGGKKGKG 627
G V +L L KD + + +K G GKG
Sbjct: 742 GTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKG 777
>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46
PE=1 SV=2
Length = 1032
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/576 (43%), Positives = 343/576 (59%), Gaps = 29/576 (5%)
Query: 66 GNGAEKEEIDPLDAFMEGIHEE-----MRAAPPPKPKEKL---ERYKDDDEEDPMESFLM 117
G E EE+DPLDA+ME + EE MR+ EK K ++ +
Sbjct: 217 GTEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVD 276
Query: 118 AKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDH 177
A K G + D Y S+EE + + Y + ++K +EP+ DH
Sbjct: 277 ADKKKGELMENDQDAMEYSSEEEEV----DLQTALTGYQTK------QRKLLEPV---DH 323
Query: 178 SLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQL 236
I+YEPF K+FY + ++ MS+++V ++ + I V G P+P+K++ CG S ++
Sbjct: 324 GKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKI 383
Query: 237 MHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE 296
++++ K GYEKPT IQ QA+P I+SGRD+IGIAKTGSGKT AF+LPM HIMDQ L++
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEG 443
Query: 297 EGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATP 356
EGPI VI PTRELA QI E KKF+K+ G+RV VYGG +Q ELK G EI++ TP
Sbjct: 444 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP 503
Query: 357 GRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATM 413
GR+IDML + + RVTY+VLDEADRMFD+GFEPQ+ IV +RPDRQT++FSAT
Sbjct: 504 GRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATF 563
Query: 414 PRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDV 473
PR +E LAR ILS P+ V VG + D+ Q V VI + + L LLE L + G V
Sbjct: 564 PRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK-LLELLGHYQESGSV 622
Query: 474 LVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARG 533
++F K+ D + L + + +LHG DQ R I+ FK+G +L+AT VAARG
Sbjct: 623 IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARG 682
Query: 534 LDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAA 593
LD+K + VVN+ + +VHR GRTGRAG+K G AYT +T+ +AR+AG+++ +L +
Sbjct: 683 LDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNK-GYAYTFITEDQARYAGDIIKALELS 741
Query: 594 GQNVSMELMDLA--MKDGRFRSKRDARKGGGKKGKG 627
G V +L L KD + + +K G GKG
Sbjct: 742 GTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKG 777
>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46
PE=2 SV=1
Length = 1032
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/576 (43%), Positives = 343/576 (59%), Gaps = 29/576 (5%)
Query: 66 GNGAEKEEIDPLDAFMEGIHEE-----MRAAPPPKPKEKLE---RYKDDDEEDPMESFLM 117
GN E EE+DPLDA+ME + EE MR+ EK K ++ +
Sbjct: 217 GNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVD 276
Query: 118 AKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDH 177
+ K G + D Y S+EE A+ Y + ++K +EP+ DH
Sbjct: 277 SDKKKGELMENDQDAMEYSSEEEEVDLQTALTG----YQTK------QRKLLEPV---DH 323
Query: 178 SLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQL 236
I+YEPF K+FY + ++ MS+++V ++ + I V G P+P+K++ CG S ++
Sbjct: 324 GKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKI 383
Query: 237 MHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE 296
++++ K GYEKPT IQ QA+P I+SGRD+IGIAKTGSGKT AF+LPM HIMDQ L++
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEG 443
Query: 297 EGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATP 356
EGPI VI PTRELA QI E KKF+K+ G+RV VYGG +Q ELK G EI++ TP
Sbjct: 444 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP 503
Query: 357 GRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATM 413
GR+IDML + + RVTY+VLDEADRMFD+GFEPQ+ IV +RPDRQT++FSAT
Sbjct: 504 GRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATF 563
Query: 414 PRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDV 473
PR +E L R ILS P+ V VG + D+ Q V VI + + L LLE L + G V
Sbjct: 564 PRAMEALVRRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK-LLELLGHYQESGSV 622
Query: 474 LVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARG 533
++F K+ D + L + + +LHG DQ R I+ FK+G +L+AT VAARG
Sbjct: 623 IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARG 682
Query: 534 LDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAA 593
LD+K + VVN+ + +VHR GRTGRAG+K G AYT +T+ +AR+AG+++ +L +
Sbjct: 683 LDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNK-GYAYTFITEDQARYAGDIIKALELS 741
Query: 594 GQNVSMELMDLA--MKDGRFRSKRDARKGGGKKGKG 627
G V +L L KD + + +K G GKG
Sbjct: 742 GTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKG 777
>sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp5 PE=3 SV=1
Length = 1192
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/477 (44%), Positives = 300/477 (62%), Gaps = 17/477 (3%)
Query: 172 IPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDC 230
IP ++H ++YEPF K FY + ++++ M++++ + L I+V G DVP+PV+ + C
Sbjct: 503 IPTVNHEKVEYEPFRKKFYTEPSNLAQMTDEEAASLRLELDGIKVRGVDVPKPVQKWSQC 562
Query: 231 GFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ 290
G Q + I + GYE PTSIQ QA+P I+SGRD+IG+AKTGSGKT AF++PM HI DQ
Sbjct: 563 GLGVQALDVIERLGYESPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQ 622
Query: 291 PELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCE 350
L EGPIG+I PTRELA QI+ + K F K+ +R YGG DQ +LK G E
Sbjct: 623 RPLDNMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAE 682
Query: 351 IVIATPGRLIDMLKMKA---LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTL 407
IV+ TPGR+ID+L A + RVTY+VLDEADRMFD+GFEPQ+ I+ IRPDRQT+
Sbjct: 683 IVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTV 742
Query: 408 LFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGM 467
LFSAT PR +E LAR+ L+ P+ + VG + +ITQ+V V D K LLE L +
Sbjct: 743 LFSATFPRNMEALARKALTKPIEIIVGGRSVVAPEITQIVEVRNEDT-KFVRLLEILGNL 801
Query: 468 I-----DDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYH 522
+D L+F ++ D + +L +KG+ ++HG KDQ R ++ FK+G++
Sbjct: 802 YSDDANEDARSLIFVERQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFP 861
Query: 523 VLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARF 582
VLIAT VAARGLD+K +K VVN+D ++ +VHR GRTGRAG+ GTA T +T+++ R+
Sbjct: 862 VLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNT-GTAVTFLTEEQERY 920
Query: 583 AGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
+ ++ +L +GQ V + + S + K G +K G G+G+ +D
Sbjct: 921 SVDIAKALKQSGQQVPEPVQKM------VDSFLEKVKAGKEKASASGFGGKGLERLD 971
>sp|A4RN46|PRP5_MAGO7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=PRP5 PE=3 SV=1
Length = 1012
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/555 (42%), Positives = 340/555 (61%), Gaps = 34/555 (6%)
Query: 104 KDDDEEDPMESFLM---------AKKDVGLTLAADAL---RAGYDSDEEVYAAAKAVDAG 151
+DDDE DP+++F+ A K V +A L A + D+E A+ K
Sbjct: 250 EDDDEVDPLDAFMADLTEPSFGPASKPVKTLSSAKVLPTPEAYFSDDDEFGASTKE---- 305
Query: 152 MLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL 211
D+ + K+K + IP +D+S +D P K+F+ + +S M+E +V E + L
Sbjct: 306 --GVDAKAIMAMAAKRKKKEIPTIDYSKLDIVPVRKNFWVEPYELSEMTEAEVAELRLEL 363
Query: 212 -AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAK 270
I+VSG DVP+PV+ + CG + ++ I+K Y+KPT+IQ QALP+I+SGRD++G+AK
Sbjct: 364 DGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAK 423
Query: 271 TGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVS 330
TGSGKT AF+LPM HI DQ ++ EGPIG+I PTRELA QI+ + K F K+ G+R
Sbjct: 424 TGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAV 483
Query: 331 AVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKM---KALTMSRVTYLVLDEADRMFDL 387
YGG DQ +LK G EIV+AT GR+ID+L + +++ R TY+VLDEADRMFD+
Sbjct: 484 CAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDM 543
Query: 388 GFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVV 447
GFEPQ+ I +RPDRQT+LFSATMP+ ++ L +++L +PV + VG + +ITQ+V
Sbjct: 544 GFEPQVMKIFANVRPDRQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIV 603
Query: 448 HVIPSDAEKLPWLLEKLPGMI-DDGDV--LVFASKKTTVDEIESQLAQKGFKAAALHGDK 504
I + K LLE L + DD DV L+F ++ DE+ +L +KG+ +LHG K
Sbjct: 604 E-IRDEKSKFNRLLELLGELYKDDDDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGK 662
Query: 505 DQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRA 564
DQ R + FKSGV V+IAT VAARGLD+K +K VVN+D ++ +VHR GRTGRA
Sbjct: 663 DQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRA 722
Query: 565 GDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKK 624
G+ GTA T VT+++ A + +L +GQ V +L+++ FR K A K +
Sbjct: 723 GNT-GTAVTFVTEEQENCAIGIAKALEQSGQPVPEKLIEMRKA---FREKVKAGKAKDQS 778
Query: 625 GKGRGGAGRGVRGVD 639
G G G+G+ +D
Sbjct: 779 GFG----GKGLEKLD 789
>sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP2 PE=3 SV=1
Length = 554
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 294/432 (68%), Gaps = 5/432 (1%)
Query: 173 PALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGF 232
P D L + F K+FYQ+ ++ MSE +V+E++K + +SG DVP+P+++F++ GF
Sbjct: 61 PNWDEELPNLPVFEKNFYQEHPDVAQMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGF 120
Query: 233 STQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE 292
+ ++ + ++G+ KPT IQCQ P+ LSGRD+IG+A TGSGKT ++ LP IVHI QP
Sbjct: 121 PSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPL 180
Query: 293 LQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIV 352
L +GPI ++ APTRELA QI E KF S IR + VYGG+ K Q ++L+ G EI+
Sbjct: 181 LSPGDGPIVLVLAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEIL 240
Query: 353 IATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSAT 412
IATPGRLIDML++ + RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL++SAT
Sbjct: 241 IATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT 300
Query: 413 MPRKVEKLAREILSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDG 471
P++V++LA + L DP++V +G + + A+ ITQ+V V+ +D EK L + L D
Sbjct: 301 WPKEVKQLASDYLHDPIQVQIGSLELSASHTITQIVEVL-TDFEKRDRLAKHLETASQDQ 359
Query: 472 D--VLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDV 529
D +++FAS K T DEI S L +G+ A A+HGDK Q R +L +F+SG +++ATDV
Sbjct: 360 DSKIIIFASTKRTCDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDV 419
Query: 530 AARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNS 589
AARG+D+K I V+N+D+ +++ +VHRIGRTGRAG GTA + T+ L+
Sbjct: 420 AARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGST-GTAISFFTEGNKSLGAALIKI 478
Query: 590 LIAAGQNVSMEL 601
+ A Q++ EL
Sbjct: 479 MREAKQDIPEEL 490
>sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP2 PE=3 SV=1
Length = 546
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/433 (47%), Positives = 293/433 (67%), Gaps = 5/433 (1%)
Query: 173 PALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGF 232
P D L F K+FY + S+ S+ ++ +++K + +SG D+P+P+ TF++ GF
Sbjct: 61 PNWDEELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGF 120
Query: 233 STQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE 292
+++ + +G++KPT IQCQ P+ LSGRD++GIA TGSGKT ++ LP IVHI QP
Sbjct: 121 PDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPL 180
Query: 293 LQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIV 352
L +GPI ++ APTRELA QI E KF S IR + VYGG+ K Q ++L G EIV
Sbjct: 181 LAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIV 240
Query: 353 IATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSAT 412
IATPGRLIDML++ + RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL++SAT
Sbjct: 241 IATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT 300
Query: 413 MPRKVEKLAREILSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDG 471
P++V++LA + L+DP++V VG + + A+ +ITQ+V V+ SD EK L + L D
Sbjct: 301 WPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVV-SDFEKRDRLNKYLETASQDN 359
Query: 472 D--VLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDV 529
+ L+FAS K D+I L + G+ A A+HGDKDQ R +LQ+F++G +++ATDV
Sbjct: 360 EYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDV 419
Query: 530 AARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNS 589
AARG+D+K I V+N+D+ +++ +VHRIGRTGRAG GTA + T++ +L++
Sbjct: 420 AARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAG-ATGTAISFFTEQNKGLGAKLISI 478
Query: 590 LIAAGQNVSMELM 602
+ A QN+ EL+
Sbjct: 479 MREANQNIPPELL 491
>sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP2 PE=1 SV=1
Length = 546
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/433 (47%), Positives = 293/433 (67%), Gaps = 5/433 (1%)
Query: 173 PALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGF 232
P D L F K+FY + S+ S+ ++ +++K + +SG D+P+P+ TF++ GF
Sbjct: 61 PNWDEELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGF 120
Query: 233 STQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE 292
+++ + +G++KPT IQCQ P+ LSGRD++GIA TGSGKT ++ LP IVHI QP
Sbjct: 121 PDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPL 180
Query: 293 LQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIV 352
L +GPI ++ APTRELA QI E KF S IR + VYGG+ K Q ++L G EIV
Sbjct: 181 LAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIV 240
Query: 353 IATPGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSAT 412
IATPGRLIDML++ + RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL++SAT
Sbjct: 241 IATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT 300
Query: 413 MPRKVEKLAREILSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDG 471
P++V++LA + L+DP++V VG + + A+ +ITQ+V V+ SD EK L + L D
Sbjct: 301 WPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVV-SDFEKRDRLNKYLETASQDN 359
Query: 472 D--VLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDV 529
+ L+FAS K D+I L + G+ A A+HGDKDQ R +LQ+F++G +++ATDV
Sbjct: 360 EYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDV 419
Query: 530 AARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNS 589
AARG+D+K I V+N+D+ +++ +VHRIGRTGRAG GTA + T++ +L++
Sbjct: 420 AARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAG-ATGTAISFFTEQNKGLGAKLISI 478
Query: 590 LIAAGQNVSMELM 602
+ A QN+ EL+
Sbjct: 479 MREANQNIPPELL 491
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/421 (47%), Positives = 292/421 (69%), Gaps = 5/421 (1%)
Query: 185 FNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
F K+FY + + MS +V +++K +++ G DVP+P++TF++ GF ++ + ++G
Sbjct: 74 FEKNFYVEHEDVQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEEG 133
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
+EKPT+IQCQ P+ LSGRD+IG+A TGSGKT ++ LP IVHI QP L +GP+ ++
Sbjct: 134 FEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDGPVVLVL 193
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
APTRELA QI E KF +S IR + VYGG+ K Q ++L+ G EI+IATPGRLIDML+
Sbjct: 194 APTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLE 253
Query: 365 MKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ + RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL++SAT P++V++LAR+
Sbjct: 254 IGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDY 313
Query: 425 LSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGD--VLVFASKKT 481
L DP++V +G + + A+ ITQ+V V+ SD +K L++ L D D +++FAS K
Sbjct: 314 LHDPIQVNIGSLELAASHTITQLVEVV-SDFDKRDRLVKHLEIASKDKDSKIIIFASTKR 372
Query: 482 TVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKS 541
T DEI S L Q G+ A A+HGDK Q R +L +F++G +++ATDVAARG+D+K I
Sbjct: 373 TCDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGIDVKGINF 432
Query: 542 VVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMEL 601
V+N+D+ +++ +VHRIGRTGRAG GTA + T+ +L++ + A Q + +L
Sbjct: 433 VINYDMPGNIEDYVHRIGRTGRAG-ATGTAISFFTEANKTLGAQLISIMREAKQEIPQDL 491
Query: 602 M 602
+
Sbjct: 492 L 492
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/420 (48%), Positives = 285/420 (67%), Gaps = 5/420 (1%)
Query: 185 FNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
F K+FY + ++ S++D+ +++K + V G D+P P+ TF++ GF ++ + QG
Sbjct: 87 FEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQG 146
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
+ KPT IQCQ P+ LSGRD+IGIA TGSGKT ++ LP IVHI QP+LQ +GPI ++
Sbjct: 147 FPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVL 206
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
APTRELA QI E KF KS IR + VYGG K Q ++L G EI IATPGRLIDML+
Sbjct: 207 APTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLE 266
Query: 365 MKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL++SAT P++V++L R+
Sbjct: 267 AGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDY 326
Query: 425 LSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGD--VLVFASKKT 481
L+DP++VT+G + + A+ ITQ+V VI + K L++ L +++ D +LVFAS K
Sbjct: 327 LNDPIQVTIGSLELAASHTITQLVEVI-DEFSKRDRLVKHLESALNEKDNKILVFASTKR 385
Query: 482 TVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKS 541
T DEI + L G+ A A+HGDK+Q R +L +F+ G +++ATDVAARG+D+K I
Sbjct: 386 TCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITH 445
Query: 542 VVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMEL 601
V+N+D+ +++ +VHRIGRTGR G GTA + T+ ++ G+L + A Q V EL
Sbjct: 446 VINYDMPGNIEDYVHRIGRTGRGG-ASGTAISFFTEGNSKLGGDLCKIMREANQTVPPEL 504
>sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP2 PE=3 SV=3
Length = 554
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 286/421 (67%), Gaps = 5/421 (1%)
Query: 185 FNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
F K+FY + +S SE +V ++K ++ G D+P+P+ +F++ GF +++ + +QG
Sbjct: 85 FEKNFYSEHPDVSARSESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQG 144
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
+ KPT+IQCQ P+ LSGRD+IGIA TGSGKT ++ LP IVHI QP L +GPI ++
Sbjct: 145 FPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLGPGDGPIVLVL 204
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
APTRELA QI E KF S IR + +YGG K Q ++L G EI IATPGRLIDML+
Sbjct: 205 APTRELAVQIQQECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLE 264
Query: 365 MKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL++SAT P++V+ L R+
Sbjct: 265 TGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQTLTRDY 324
Query: 425 LSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGD--VLVFASKKT 481
L+DP++VT+G + + A+ ITQ+V V+ S+ EK L++ L D + VL+F+S K
Sbjct: 325 LNDPIQVTIGSLELAASHTITQIVEVL-SEFEKRDRLVKHLETATADKEAKVLIFSSTKR 383
Query: 482 TVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKS 541
DEI S L G+ A A+HGDK Q R +L++FK+G +++ATDVAARG+D+K I
Sbjct: 384 ACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVKGISY 443
Query: 542 VVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMEL 601
V+N+D+ +++ +VHRIGRTGRAG GTA +L T+ ++ G+L + A Q V EL
Sbjct: 444 VINYDMPGNIEDYVHRIGRTGRAG-TTGTAVSLFTEANSKLGGDLCKIMREANQTVPPEL 502
Query: 602 M 602
+
Sbjct: 503 L 503
>sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana
GN=RH45 PE=2 SV=1
Length = 989
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 249/570 (43%), Positives = 338/570 (59%), Gaps = 61/570 (10%)
Query: 45 DTDLDN------IDYEDNDAAKAANDTGN-GAEKEEIDPLDAFMEGIHEEMRAAPPPKPK 97
DT L+N + E+ A + + G+ A+++EIDPLDAFM + P
Sbjct: 215 DTKLENGGDAKMVASENETAVTVSENGGDRAADEDEIDPLDAFMNTM-----VLPEV--- 266
Query: 98 EKLERYKDDDEEDPMESFLMAKKDVG-------LTLAADALRAGYDSDEEVYAAAKAVDA 150
EKL D D F M K+ G A + G DSD + Y+ K+ D
Sbjct: 267 EKLSNIVIDGILD----FKMNGKETGDQAKKGFNKAALGRIIQGEDSDSD-YSEPKSDDD 321
Query: 151 GMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKS 210
LD D ++ V+K K E + +DHS I+YEPF K+FY + IS M++ V Y+K
Sbjct: 322 PSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQDAVNAYRKE 381
Query: 211 LAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAK 270
L ++V G DVPRP++ + G +++++ + K YEKP IQ QALPII+SGRD IG+AK
Sbjct: 382 LELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAK 441
Query: 271 TGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVS 330
TGSGKT FVLPM+ HI DQP ++ +GPIG++ APTREL QIY + +KF+K+ GI
Sbjct: 442 TGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICV 501
Query: 331 AVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKM---KALTMSRVTYLVLDEADRMFDL 387
VYGG Q ELK G EIV+ TPGR+ID+L K + RVTYLV+DEADRMFD+
Sbjct: 502 PVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDM 561
Query: 388 GFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVV 447
GFEPQI IV IRPDRQT+LFSAT PR+VE LAR++L+ PV + VG + N+DITQ+V
Sbjct: 562 GFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLV 621
Query: 448 HVIPSDAEKLPWLLEKLPGMIDDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQA 507
+ P ++E+ LLE L + G VLVF
Sbjct: 622 EIRP-ESERFSRLLELLGEWYEKGKVLVFVR----------------------------- 651
Query: 508 SRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDK 567
S+ + + FKS V ++LIAT VAARGLD+K ++ VVNFD + +VHR+GRTGRAG K
Sbjct: 652 SQEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK 711
Query: 568 DGTAYTLVTQKEARFAGELVNSLIAAGQNV 597
G A T +++ +A++A +LV +L + Q V
Sbjct: 712 -GCAVTFISEDDAKYAPDLVKALELSEQPV 740
>sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=prp-5 PE=3 SV=1
Length = 1194
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/575 (40%), Positives = 338/575 (58%), Gaps = 48/575 (8%)
Query: 72 EEIDPLDAFMEGIHEEMRAAPPPKPKEKLERYKDDDEEDPMESFLMAKKDVGLTLAADAL 131
+E+DPLDAFM G LE+ +E L KK+ + A
Sbjct: 436 DEVDPLDAFMAG----------------LEQTASGEESHSKADTLTEKKNGNIPPEA--- 476
Query: 132 RAGYDSDEEVYAAAKAVDAGMLDYDSDDNPVVVEKKKIEPIPALDHSLIDYEPFNKDFYQ 191
Y SD++ A D + + KKK + IP +D+S +D P K+F+
Sbjct: 477 ---YFSDDDYGYEADGTDPTSI-------LAMASKKKKKDIPTIDYSKLDLNPIRKNFWV 526
Query: 192 DSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTS 250
+ +S MSE+++ E + L I+VSG ++P+PV+ + CG + ++ I G+EKPT
Sbjct: 527 EPYELSHMSEEELAELRLELDGIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTP 586
Query: 251 IQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTREL 310
IQ QALP+I+SGRD+IG+AKTGSGKT AF LPM+ H+ DQ + ++G I +I PTREL
Sbjct: 587 IQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRHVKDQDPVTGDDGAIALIMTPTREL 646
Query: 311 AHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLKM---KA 367
QIY + + FAK+ +RV A YGG + DQ ELK G EI++ATPGRLID+L +
Sbjct: 647 CTQIYSDLQPFAKALKLRVVAAYGGNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRV 706
Query: 368 LTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSD 427
+ R TYLVLDEADRMFD+GFEPQ+ I +RPDRQT+LFSATMPR ++ L +++L D
Sbjct: 707 TNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRIIDALTKKVLRD 766
Query: 428 PVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMI-DDGDV--LVFASKKTTVD 484
PV +TVG + +ITQ+V V+ + +K LLE L + DD DV L+F ++ D
Sbjct: 767 PVEITVGGRSVVAPEITQIVEVM-DEGKKFNRLLELLGELYADDDDVRSLIFVERQEKAD 825
Query: 485 EIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSVVN 544
++ +L ++G+ ++HG KDQ R + FK GV +LIAT +AARGLD+K +K V+N
Sbjct: 826 DLLRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVKQLKLVIN 885
Query: 545 FDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELMDL 604
+D ++ +VHR GRTGRAG+ GTA T +T+++ A + +L +GQ V
Sbjct: 886 YDAPNHLEDYVHRAGRTGRAGNT-GTAVTFITEEQENCASGIAKALEQSGQPVP------ 938
Query: 605 AMKDGRFRSKRDARKGGGKKGKGRGGAGRGVRGVD 639
R R A K K GK + +G G +G++
Sbjct: 939 ----DRLNEMRKAWKEKVKAGKAKDASGFGGKGLE 969
>sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=PRP5 PE=3 SV=1
Length = 1156
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/439 (47%), Positives = 284/439 (64%), Gaps = 10/439 (2%)
Query: 175 LDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVSGFDVPRPVKTFEDCGFS 233
+DHS IDYEPFNK FY A I MSE+ + + + AI V G D P+P+ + CG
Sbjct: 425 VDHSAIDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLP 484
Query: 234 TQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPEL 293
+ I + GY PT IQ QA+P I+SGRDIIG+AKTGSGKT AF+LPM HI DQ +
Sbjct: 485 ASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPV 544
Query: 294 QKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVI 353
+ EGP+G+I PTRELA QIY E + F K+ G+R + VYGG +Q E+K +IV+
Sbjct: 545 EPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVV 604
Query: 354 ATPGRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFS 410
ATPGRLID+L + + RVTYLVLDEADRMFD+GFEPQ+ I+ IRPDRQT+LFS
Sbjct: 605 ATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFS 664
Query: 411 ATMPRKVEKLAREILSD-PVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMID 469
AT P+++E LAR++L + P+ +TVG + +I Q+V V D K LLE L + +
Sbjct: 665 ATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDT-KFHRLLEILGELYN 723
Query: 470 ---DGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIA 526
D L+F ++ D++ L +KG+ +LHG KDQ R E + FK+G ++ A
Sbjct: 724 REKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTA 783
Query: 527 TDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGEL 586
T VAARGLD+K +K V+N+D+ M+ +VHR GRTGRAG K GT T +T ++ R+A ++
Sbjct: 784 TSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQK-GTCITFITPEQDRYARDI 842
Query: 587 VNSLIAAGQNVSMELMDLA 605
+ +L A+ +V EL +A
Sbjct: 843 IAALKASAAHVPPELEAMA 861
>sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum
GN=helB1 PE=2 SV=1
Length = 1151
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/432 (45%), Positives = 288/432 (66%), Gaps = 5/432 (1%)
Query: 176 DHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQ 235
DH+ I Y F K+FY + ++ M+E +V++++ L ++++G D P+P++++ G + +
Sbjct: 460 DHTSIKYAEFQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEK 519
Query: 236 LMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQK 295
+ + K YEKPTSIQ Q +P I++GRD+IGIA+TGSGKT AF+LPM HI+ QP+
Sbjct: 520 VHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAP 579
Query: 296 EEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIAT 355
EG I +I +PTRELA QI++E KKF+K G+R + VYGG S +Q ELK G +IV+ T
Sbjct: 580 GEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCT 639
Query: 356 PGRLIDML---KMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSAT 412
PGR+ID+L + + RVT+LVLDEADRMFD+GF PQI IV IRPDRQT++FSAT
Sbjct: 640 PGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSAT 699
Query: 413 MPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGD 472
P KVE +A++IL+ P+ + G + + DI Q V V P++ + L+E L G
Sbjct: 700 FPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVRPTET-RFRRLIELLSIWYHKGQ 758
Query: 473 VLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAAR 532
+L+F +++ T D + QL+ ++ +LHG KDQ R E + FK+ V +LIAT +A+R
Sbjct: 759 ILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASR 818
Query: 533 GLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIA 592
GLDIK + VVNFD ++ +VHR+GRTGRAG++ GTAYT +T E RF+ ++ +L
Sbjct: 819 GLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNR-GTAYTFITPDEERFSSSIIKALEQ 877
Query: 593 AGQNVSMELMDL 604
+G V EL L
Sbjct: 878 SGSKVPDELRKL 889
>sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP2 PE=3 SV=1
Length = 536
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/427 (48%), Positives = 285/427 (66%), Gaps = 6/427 (1%)
Query: 180 IDYEP-FNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMH 238
ID P F K+FY + ++ S QDV ++K ++ G D+P+P+ +F++ GF ++
Sbjct: 59 IDSLPKFEKNFYNEHPDVTARSVQDVNAFRKEHDMKCDGTDIPKPITSFDEAGFPDYVLK 118
Query: 239 AISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEG 298
+ +QG+ KPTSIQCQ P+ LSGRD++GIA TGSGKT ++ LP IVHI QP L +G
Sbjct: 119 EVKQQGFPKPTSIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPSIVHINAQPLLSPGDG 178
Query: 299 PIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGR 358
PI ++ APTRELA QI E KF S IR + VYGG K Q ++L G EI IATPGR
Sbjct: 179 PIVLVLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGR 238
Query: 359 LIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVE 418
LIDML+ + RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQTL++SAT P++V+
Sbjct: 239 LIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQ 298
Query: 419 KLAREILSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGD--VLV 475
L R+ L+DP++VTVG + + A+ ITQ+V V+ ++ EK L++ L D + L+
Sbjct: 299 ALTRDYLNDPIQVTVGSLELAASHTITQLVEVV-TEFEKRDRLIKHLETATADPEAKCLI 357
Query: 476 FASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLD 535
FAS K T DEI + L G+ A A+HGDK Q R +L++FK+G +++ATDVAARG+D
Sbjct: 358 FASTKRTCDEITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGID 417
Query: 536 IKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQ 595
+K I V+N D+ +++ +VHRIGRTGRAG GTA + T ++ G+L + A Q
Sbjct: 418 VKGISYVINLDMPGNIEDYVHRIGRTGRAGST-GTAVSFFTDNNSKLGGDLCKIMREANQ 476
Query: 596 NVSMELM 602
+ ELM
Sbjct: 477 TIPPELM 483
>sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 OS=Dictyostelium
discoideum GN=ddx17 PE=3 SV=1
Length = 785
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/423 (48%), Positives = 281/423 (66%), Gaps = 3/423 (0%)
Query: 185 FNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
F K+FY + +S +++++ +++ S + V G +VP P+ F F LM I G
Sbjct: 344 FEKNFYLEHPDVSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAG 403
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
+ PT IQ QA PI L GRDIIG+AKTGSGKT AF+LP IVHI QP L++++GPI ++
Sbjct: 404 FPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVL 463
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
APTRELA QI ET KF + I + VYGG SK Q LK G EIVIATPGRLID+L+
Sbjct: 464 APTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILE 523
Query: 365 MKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ RVTYLVLDEADRM D+GFEPQIR I+ QIRPDRQTL+FSAT P++V+ LA +
Sbjct: 524 SGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDF 583
Query: 425 LSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGDVLVFASKKTTV 483
L+D ++V +G + AN ++ Q+V V D EK +L L + D V+VFA + V
Sbjct: 584 LTDHIQVHIGSTEITANHNVRQIVEVC-QDFEKKERMLSFLGSVGRDEKVIVFAETRKGV 642
Query: 484 DEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKSVV 543
D+++ L GFK+ +HG+K Q R +L +FK+G+ ++IATDVA+RGLDIK IK VV
Sbjct: 643 DDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVV 702
Query: 544 NFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMELMD 603
N+D +++++HRIGRT RAG G +Y+L+T AR A EL+ L A Q + +EL +
Sbjct: 703 NYDFPNTIEVYIHRIGRTARAG-ASGVSYSLLTTDNARLANELIKVLTEAKQKIPIELSN 761
Query: 604 LAM 606
L++
Sbjct: 762 LSV 764
>sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=PRP5 PE=3 SV=1
Length = 1064
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/549 (40%), Positives = 336/549 (61%), Gaps = 29/549 (5%)
Query: 106 DDEEDPMESFLM------AKKDVGLTLAADALRAGYDSDEEVYAAAKAVDAGMLDYDSDD 159
D++ DP+++F+ + +G A +AG + E Y + D G + +D
Sbjct: 303 DEDVDPLDAFMADLEQTGSAGGIGSVPARQKQKAGKGFEPEAYFSDD--DYGYEEDKADP 360
Query: 160 NPVVV--EKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSL-AIRVS 216
+ ++ KKK + IP +D+S I+ K+F+ + +S M+E D+ + + L I+VS
Sbjct: 361 SSILAMASKKKKKDIPTIDYSKIELNQIRKNFWVEPQELSQMTEDDIADLRLELDGIKVS 420
Query: 217 GFDVPRPVKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKT 276
G +VP+PV+ + CG + ++ + GYEKPTSIQ QALP+I+SGRD+IG+AKTGSGKT
Sbjct: 421 GKNVPKPVQKWSQCGLTRPILDVVEGLGYEKPTSIQMQALPVIMSGRDVIGVAKTGSGKT 480
Query: 277 AAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGM 336
AFVLPM+ HI DQ + ++G I +I PTREL QIY + FAK+ +R A YGG
Sbjct: 481 MAFVLPMLRHIKDQDPVTGDDGAIALIMTPTRELCTQIYSDLLPFAKALKLRAIAAYGGN 540
Query: 337 SKLDQFKELKAGCEIVIATPGRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQI 393
+ DQ ELK G EI++ATPGR+ID+L + + R TYLVLDEADRMFD+GFEPQ+
Sbjct: 541 AIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYLVLDEADRMFDMGFEPQV 600
Query: 394 RSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSD 453
I +RPDRQT+LFSATMPR ++ L +++L +PV + VG + +ITQ+V ++ +
Sbjct: 601 MKIFNNVRPDRQTILFSATMPRIIDALTKKVLREPVEIQVGGRSVVAPEITQIVEIL-DE 659
Query: 454 AEKLPWLLEKLPGM-IDDGDV--LVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRM 510
+K LLE L + DD DV L+F ++ D++ ++ ++G+ ++HG KDQ R
Sbjct: 660 GKKFVRLLELLGELYADDDDVRALIFVERQEKADDLLREVLRRGYGCMSIHGGKDQEDRN 719
Query: 511 EILQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGT 570
+ FK GV ++IAT VAARGLD+K +K VVN+D ++ +VHR GRTGRAG+ GT
Sbjct: 720 STISDFKKGVCPIMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNT-GT 778
Query: 571 AYTLVTQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGG 630
A T +T+++ A + +L +GQ V +L ++ R A K K GK +
Sbjct: 779 AVTFITEEQENCAPGIAKALEQSGQPVPEQLNEM----------RKAWKEKVKTGKAKDA 828
Query: 631 AGRGVRGVD 639
+G G +G++
Sbjct: 829 SGFGGKGLE 837
>sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp2 PE=2 SV=2
Length = 550
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/425 (48%), Positives = 288/425 (67%), Gaps = 5/425 (1%)
Query: 184 PFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQ 243
PF KDFY++ ++ S+ +V EY+K I V G +VP+PV TFE+ GF ++ + +
Sbjct: 81 PFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQL 140
Query: 244 GYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 303
G+E PT IQ QA P+ +SGRD++GI+ TGSGKT ++ LP IVHI QP L +GPI ++
Sbjct: 141 GFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLV 200
Query: 304 CAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDML 363
APTRELA QI E KF KS IR + VYGG+ + Q ++L G EI IATPGRL+DML
Sbjct: 201 LAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDML 260
Query: 364 KMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLARE 423
+ RVTYLVLDEADRM D+GFEPQIR IV QIRPDRQT++FSAT P++V++LAR+
Sbjct: 261 DSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARD 320
Query: 424 ILSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDDGD--VLVFASKK 480
L+D ++VTVG + + A+ +I Q+V V+ +A+K L + + ++ D D VL+F K
Sbjct: 321 YLNDYIQVTVGSLDLAASHNIKQIVEVV-DNADKRARLGKDIEEVLKDRDNKVLIFTGTK 379
Query: 481 TTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIK 540
D+I L Q G+ A A+HGDK Q R +L +F++G +++ATDVA+RG+D+K I
Sbjct: 380 RVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGIT 439
Query: 541 SVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSME 600
V N+D + + +VHRIGRTGRAG K GTAYT T A+ A ELV+ L A Q++ +
Sbjct: 440 HVFNYDFPGNTEDYVHRIGRTGRAGAK-GTAYTYFTSDNAKQARELVSILSEAKQDIDPK 498
Query: 601 LMDLA 605
L ++A
Sbjct: 499 LEEMA 503
>sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp.
japonica GN=Os08g0154200 PE=3 SV=2
Length = 947
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/476 (46%), Positives = 297/476 (62%), Gaps = 30/476 (6%)
Query: 164 VEKKKIEPIPALDHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRP 223
V+K K+E + +DHS I+Y+PF K+ Y + I+ M+ ++V Y+K+L ++V G DVP+P
Sbjct: 224 VKKTKVEKLAIVDHSKIEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKP 283
Query: 224 VKTFEDCGFSTQLMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPM 283
+KT+ G +++L+ I K G+EKP IQ QALPII+SGRD IGIAKTGSGKT AFVLPM
Sbjct: 284 IKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPM 343
Query: 284 IVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFK 343
+ H+ DQP + +GPIG+I APTREL QI+ + KKFAKS GI A+YGG Q
Sbjct: 344 LRHVKDQPPVVPGDGPIGLIMAPTRELVVQIHSDIKKFAKSLGINCVAIYGGSGVAQQIS 403
Query: 344 ELKAGCEIVIATPGRLIDMLKM---KALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQI 400
ELK G EIV+ TPGR+ID+L K + RVT+LV+DEADRMFD+GFEPQI IV
Sbjct: 404 ELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNT 463
Query: 401 RPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWL 460
RPDRQT+LFSA PR+VE LAR++L+ PV + VG + N+DITQ+V V P + L L
Sbjct: 464 RPDRQTVLFSAIFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFLR-L 522
Query: 461 LEKLPGMIDDGDVLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGV 520
LE L D G +LVF + D + L Q+G+ +LHG KDQ R L FKS
Sbjct: 523 LELLGEWFDRGKILVFVHSQDKCDSLLKDLFQRGYPCLSLHGGKDQTDRESTLADFKS-- 580
Query: 521 YHVLIATDVAARGLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEA 580
+++ VVN+D+ + +VHR+GRTG AG K G A T ++ +E
Sbjct: 581 -----------------NLELVVNYDVPNHYEDYVHRVGRTGHAGRK-GFAVTFISDEEE 622
Query: 581 RFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGAGRGVR 636
R+A +L +L + Q V +L LA RF +K K G ++ G G G G +
Sbjct: 623 RYAPDLAKALELSEQAVPQDLKGLA---DRFMAK---VKQGTEQAHGTGYGGSGFK 672
>sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS)
GN=DBP2 PE=3 SV=2
Length = 545
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 281/424 (66%), Gaps = 5/424 (1%)
Query: 185 FNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQLMHAISKQG 244
F K FY++ +++ S QDV ++K + V G +VPRPV+TF++ GF ++ + QG
Sbjct: 88 FEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQG 147
Query: 245 YEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 304
+ KPT IQ Q P+ LSGRD++GIA+TGSGKT + LP IVHI QP L +GPI ++
Sbjct: 148 FAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLGPGDGPIVLVL 207
Query: 305 APTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLIDMLK 364
APTRELA QI E KF KS IR + VYGG+ + Q ++L G E+ IATPGRLIDML+
Sbjct: 208 APTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRLIDMLE 267
Query: 365 MKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 424
+ RVTYLVLDEADRM D+GFEPQIR I+GQIRPDRQT ++SAT P++V +LA +
Sbjct: 268 AGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLAHDF 327
Query: 425 LSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDD--GDVLVFASKKT 481
L D ++V +G + AN ITQ+V ++ SD EK ++ L ++DD +L+F K
Sbjct: 328 LHDYIQVYIGSQDLSANHRITQIVEIV-SDFEKRDRMINHLERIMDDKKSKILIFTGTKR 386
Query: 482 TVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSIKS 541
D+I L Q G+ A ++HGDK Q R +L +FK+G +++ATDVA+RG+D++ I
Sbjct: 387 VADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITH 446
Query: 542 VVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIAAGQNVSMEL 601
V+N+D + + +VHRIGRTGRAG K GTA TL T A+ A +LVN L + Q + L
Sbjct: 447 VLNYDYPNNSEDYVHRIGRTGRAGAK-GTAITLFTTDNAKQARDLVNILTESKQQIDPRL 505
Query: 602 MDLA 605
++A
Sbjct: 506 AEMA 509
>sp|Q5B0J9|DBP2_EMENI ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp2
PE=3 SV=1
Length = 563
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 285/433 (65%), Gaps = 5/433 (1%)
Query: 176 DHSLIDYEPFNKDFYQDSASISGMSEQDVMEYKKSLAIRVSGFDVPRPVKTFEDCGFSTQ 235
D L F K FY++ ++ S+++V E++K + V G DVPRPV+TF++ GF
Sbjct: 91 DWDLDTLPKFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQY 150
Query: 236 LMHAISKQGYEKPTSIQCQALPIILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQK 295
++ + QG+EKPT+IQ Q P+ LSGRD++GIA+TGSGKT ++ LP IVHI QP L
Sbjct: 151 VLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAP 210
Query: 296 EEGPIGVICAPTRELAHQIYLETKKFAKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIAT 355
+GPI +I APTRELA QI E KF KS IR + VYGG+ K Q ++L G E+ IAT
Sbjct: 211 GDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIAT 270
Query: 356 PGRLIDMLKMKALTMSRVTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR 415
PGRLIDML+ + RVTYLVLDEADRM D+GFEPQIR I+ QIRPDRQT ++SAT P+
Sbjct: 271 PGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPK 330
Query: 416 KVEKLAREILSDPVRVTVGEVGM-ANEDITQVVHVIPSDAEKLPWLLEKLPGMIDD--GD 472
+V +LA + L++ ++V +G + + AN ITQ+V VI S+ EK +++ L ++++
Sbjct: 331 EVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVI-SEFEKRDRMIKHLEKIMENRGNK 389
Query: 473 VLVFASKKTTVDEIESQLAQKGFKAAALHGDKDQASRMEILQKFKSGVYHVLIATDVAAR 532
LVF K DEI L Q G+ A ++HGDK Q R +L +FK+G +++ATDVA+R
Sbjct: 390 CLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASR 449
Query: 533 GLDIKSIKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLVTQKEARFAGELVNSLIA 592
G+D++ I V+N+D + + +VHRIGRTGRAG K GTA T T A+ A +LV L
Sbjct: 450 GIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAK-GTAITFFTTDNAKQARDLVTILSE 508
Query: 593 AGQNVSMELMDLA 605
A Q + L ++
Sbjct: 509 AKQQIDPRLAEMV 521
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,649,440
Number of Sequences: 539616
Number of extensions: 13898646
Number of successful extensions: 49233
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 471
Number of HSP's that attempted gapping in prelim test: 41501
Number of HSP's gapped (non-prelim): 3889
length of query: 787
length of database: 191,569,459
effective HSP length: 126
effective length of query: 661
effective length of database: 123,577,843
effective search space: 81684954223
effective search space used: 81684954223
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)