Query 003911
Match_columns 787
No_of_seqs 1065 out of 5457
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 08:05:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003911.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003911hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.8E-49 1.3E-53 470.1 24.8 96 366-462 652-750 (768)
2 4eco_A Uncharacterized protein 100.0 2.1E-46 7.1E-51 436.4 24.9 403 29-450 28-578 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 9.6E-47 3.3E-51 446.1 20.6 402 27-450 265-818 (876)
4 1ogq_A PGIP-2, polygalacturona 100.0 4.7E-44 1.6E-48 379.7 22.1 292 27-432 2-306 (313)
5 4b9d_A Serine/threonine-protei 100.0 8.3E-42 2.8E-46 361.0 14.0 186 593-785 24-211 (350)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.6E-41 9E-46 351.2 13.6 185 593-785 32-220 (311)
7 4fih_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 351.5 16.2 182 592-785 73-256 (346)
8 4asz_A BDNF/NT-3 growth factor 100.0 1.6E-40 5.6E-45 346.5 11.9 187 593-784 13-215 (299)
9 4fie_A Serine/threonine-protei 100.0 9.1E-40 3.1E-44 353.4 18.1 182 592-785 150-333 (423)
10 3j0a_A TOLL-like receptor 5; m 100.0 5.6E-39 1.9E-43 386.4 24.5 391 57-455 14-564 (844)
11 3hyh_A Carbon catabolite-derep 100.0 9.3E-40 3.2E-44 335.0 15.0 182 593-785 13-198 (275)
12 3ubd_A Ribosomal protein S6 ki 100.0 9E-41 3.1E-45 347.3 7.4 184 593-785 24-212 (304)
13 4aoj_A High affinity nerve gro 100.0 8.1E-40 2.8E-44 346.1 14.7 187 593-784 41-245 (329)
14 3omv_A RAF proto-oncogene seri 100.0 1E-39 3.4E-44 340.3 15.0 183 592-784 35-222 (307)
15 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-38 4.6E-43 365.9 25.4 375 56-455 3-514 (549)
16 3v47_A TOLL-like receptor 5B a 100.0 1.1E-38 3.7E-43 357.8 23.7 337 55-454 6-411 (455)
17 4gt4_A Tyrosine-protein kinase 100.0 7.4E-40 2.5E-44 343.0 12.9 188 593-784 26-232 (308)
18 4g31_A Eukaryotic translation 100.0 1.5E-39 5.1E-44 339.9 14.7 187 593-785 5-216 (299)
19 3fpq_A Serine/threonine-protei 100.0 2.9E-39 1E-43 334.4 16.7 179 595-785 28-215 (290)
20 4g3f_A NF-kappa-beta-inducing 100.0 1.6E-39 5.6E-44 341.9 13.4 178 593-785 58-242 (336)
21 3vq2_A TLR4, TOLL-like recepto 100.0 1.9E-37 6.6E-42 360.7 26.4 372 68-456 32-563 (606)
22 3hmm_A TGF-beta receptor type- 100.0 3E-38 1E-42 331.8 14.1 183 592-784 2-203 (303)
23 3t6q_A CD180 antigen; protein- 100.0 2.1E-36 7.1E-41 351.9 29.0 374 59-449 14-460 (606)
24 4ase_A Vascular endothelial gr 100.0 1E-37 3.5E-42 332.6 14.9 194 587-784 58-272 (353)
25 2id5_A Lingo-1, leucine rich r 100.0 9.6E-37 3.3E-41 343.9 20.9 311 59-434 13-336 (477)
26 2z63_A TOLL-like receptor 4, v 100.0 2.7E-36 9.1E-41 348.5 24.6 371 69-455 29-535 (570)
27 3vq2_A TLR4, TOLL-like recepto 100.0 8.5E-36 2.9E-40 346.8 28.6 147 72-224 15-164 (606)
28 3rgz_A Protein brassinosteroid 100.0 2.5E-36 8.4E-41 359.7 22.3 323 68-433 343-743 (768)
29 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.9E-35 9.8E-40 338.7 28.1 341 68-455 52-514 (562)
30 4b99_A Mitogen-activated prote 100.0 1.3E-36 4.4E-41 329.9 15.3 186 591-785 52-249 (398)
31 2id5_A Lingo-1, leucine rich r 100.0 8.9E-36 3.1E-40 336.0 22.3 324 61-455 6-337 (477)
32 3t6q_A CD180 antigen; protein- 100.0 8.8E-36 3E-40 346.7 22.8 367 68-455 129-564 (606)
33 4g8a_A TOLL-like receptor 4; l 100.0 3.3E-35 1.1E-39 343.8 26.2 372 68-455 52-584 (635)
34 1ziw_A TOLL-like receptor 3; i 100.0 3.8E-35 1.3E-39 346.0 26.6 379 57-449 4-465 (680)
35 4f9c_A Cell division cycle 7-r 100.0 4.8E-36 1.7E-40 322.0 16.8 183 588-785 16-233 (361)
36 2z7x_B TOLL-like receptor 1, v 100.0 2.4E-35 8.2E-40 336.3 22.1 341 68-455 21-485 (520)
37 4eco_A Uncharacterized protein 100.0 2.7E-35 9.4E-40 342.7 21.9 339 68-454 206-603 (636)
38 3oja_B Anopheles plasmodium-re 100.0 4.9E-35 1.7E-39 338.7 22.1 328 68-454 51-383 (597)
39 1ziw_A TOLL-like receptor 3; i 100.0 2.6E-34 9.1E-39 338.8 28.4 380 68-456 222-627 (680)
40 3v5w_A G-protein coupled recep 100.0 1E-35 3.5E-40 335.8 15.3 183 592-785 188-377 (689)
41 3o6n_A APL1; leucine-rich repe 100.0 1.2E-34 4E-39 318.0 22.1 327 68-453 45-376 (390)
42 4ecn_A Leucine-rich repeat pro 100.0 1.7E-34 5.7E-39 341.6 24.7 336 68-452 448-841 (876)
43 1ogq_A PGIP-2, polygalacturona 100.0 3.3E-35 1.1E-39 311.5 15.8 252 92-457 50-310 (313)
44 2z7x_B TOLL-like receptor 1, v 100.0 8.4E-35 2.9E-39 331.9 20.0 319 67-435 44-485 (520)
45 3v47_A TOLL-like receptor 5B a 100.0 2.8E-34 9.6E-39 321.8 23.8 311 68-438 54-415 (455)
46 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.8E-34 6.1E-39 332.0 22.7 319 68-436 76-515 (562)
47 4fcg_A Uncharacterized protein 100.0 2.8E-35 9.5E-40 314.0 13.5 275 27-431 23-314 (328)
48 3uto_A Twitchin; kinase, muscl 100.0 1.5E-34 5.2E-39 329.3 18.8 183 592-785 156-342 (573)
49 2z81_A CD282 antigen, TOLL-lik 100.0 4.7E-34 1.6E-38 328.0 18.1 343 68-436 50-515 (549)
50 2z63_A TOLL-like receptor 4, v 100.0 1.1E-32 3.7E-37 318.2 24.3 355 68-437 52-537 (570)
51 2z80_A TOLL-like receptor 2, v 100.0 7.1E-33 2.4E-37 299.4 18.3 283 53-436 26-319 (353)
52 1o6v_A Internalin A; bacterial 100.0 4.1E-32 1.4E-36 304.8 24.8 318 69-452 69-389 (466)
53 4fmz_A Internalin; leucine ric 100.0 3.7E-32 1.3E-36 293.1 22.8 232 68-321 44-276 (347)
54 3j0a_A TOLL-like receptor 5; m 100.0 9.7E-32 3.3E-36 323.4 28.2 333 71-450 7-393 (844)
55 2ft3_A Biglycan; proteoglycan, 100.0 6E-32 2.1E-36 289.4 23.6 194 71-302 36-232 (332)
56 3fe3_A MAP/microtubule affinit 100.0 5.5E-33 1.9E-37 296.1 14.5 186 590-785 12-200 (328)
57 1xku_A Decorin; proteoglycan, 100.0 1.2E-31 4E-36 287.0 23.5 263 71-431 34-306 (330)
58 2ft3_A Biglycan; proteoglycan, 100.0 1E-31 3.5E-36 287.6 22.9 277 57-429 33-331 (332)
59 4aw2_A Serine/threonine-protei 100.0 6.9E-33 2.4E-37 305.6 13.7 195 584-785 65-267 (437)
60 3zgw_A Maternal embryonic leuc 100.0 6.7E-33 2.3E-37 297.1 12.9 187 590-785 7-196 (347)
61 1o6v_A Internalin A; bacterial 100.0 1.3E-31 4.6E-36 300.6 24.0 302 68-435 90-392 (466)
62 3v8s_A RHO-associated protein 100.0 7.9E-33 2.7E-37 302.8 13.0 192 585-785 61-259 (410)
63 1o6l_A RAC-beta serine/threoni 100.0 2.7E-32 9.1E-37 291.6 16.0 184 593-785 5-191 (337)
64 3bz5_A Internalin-J, INLJ; leu 100.0 5E-31 1.7E-35 293.7 26.8 308 67-437 41-357 (457)
65 3fxz_A Serine/threonine-protei 100.0 7.4E-32 2.5E-36 283.8 18.7 182 592-785 19-202 (297)
66 3o6n_A APL1; leucine-rich repe 100.0 9.3E-32 3.2E-36 294.8 19.7 346 50-454 5-355 (390)
67 4fmz_A Internalin; leucine ric 100.0 2.1E-31 7.2E-36 287.2 22.1 281 67-431 65-346 (347)
68 2vd5_A DMPK protein; serine/th 100.0 1.8E-32 6.1E-37 300.2 13.1 195 584-785 52-256 (412)
69 4eqm_A Protein kinase; transfe 100.0 3.5E-32 1.2E-36 285.9 14.8 187 591-785 9-198 (294)
70 3uim_A Brassinosteroid insensi 100.0 1.9E-32 6.5E-37 292.7 12.8 204 580-785 17-221 (326)
71 3s95_A LIMK-1, LIM domain kina 100.0 1.1E-31 3.6E-36 284.7 18.4 185 592-785 9-208 (310)
72 2yab_A Death-associated protei 100.0 1E-31 3.4E-36 289.9 18.3 185 591-785 10-204 (361)
73 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.5E-32 8.6E-37 293.8 13.1 185 592-785 22-210 (353)
74 4dc2_A Protein kinase C IOTA t 100.0 4.2E-32 1.4E-36 295.4 14.8 185 592-785 51-239 (396)
75 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.9E-32 2.4E-36 293.0 16.2 186 592-785 64-271 (365)
76 3bz5_A Internalin-J, INLJ; leu 100.0 8E-31 2.7E-35 292.1 24.9 308 68-436 64-392 (457)
77 4g8a_A TOLL-like receptor 4; l 100.0 5.9E-31 2E-35 307.7 24.7 332 68-435 76-584 (635)
78 2bdw_A Hypothetical protein K1 100.0 9.9E-32 3.4E-36 290.7 16.7 186 590-785 26-216 (362)
79 1fot_A TPK1 delta, CAMP-depend 100.0 8.3E-32 2.8E-36 285.7 15.6 182 592-785 5-189 (318)
80 3oja_B Anopheles plasmodium-re 100.0 1.4E-31 4.9E-36 309.6 18.9 310 90-454 49-361 (597)
81 1tki_A Titin; serine kinase, m 100.0 1.9E-31 6.5E-36 283.7 18.0 183 591-785 3-189 (321)
82 3soa_A Calcium/calmodulin-depe 100.0 8.8E-32 3E-36 298.0 16.0 187 590-785 8-199 (444)
83 1xjd_A Protein kinase C, theta 100.0 7.6E-32 2.6E-36 288.9 14.8 186 591-785 15-204 (345)
84 3p86_A Serine/threonine-protei 100.0 8E-32 2.7E-36 285.1 14.7 188 591-785 35-225 (309)
85 3a8x_A Protein kinase C IOTA t 100.0 1.2E-31 4E-36 288.0 16.0 184 593-785 9-196 (345)
86 3c0i_A Peripheral plasma membr 100.0 1.4E-31 4.8E-36 288.6 16.7 190 591-785 22-219 (351)
87 3qd2_B Eukaryotic translation 100.0 1.5E-31 5E-36 286.5 16.3 189 591-785 4-262 (332)
88 3niz_A Rhodanese family protei 100.0 1.4E-31 4.8E-36 283.7 15.9 187 590-785 18-206 (311)
89 2z66_A Variable lymphocyte rec 100.0 2.5E-31 8.7E-36 281.2 17.8 251 57-434 7-264 (306)
90 3zyj_A Leucine-rich repeat-con 100.0 1.5E-30 5.3E-35 289.7 24.8 248 71-433 46-294 (440)
91 4fr4_A YANK1, serine/threonine 100.0 1.5E-31 5.3E-36 290.0 16.1 183 593-785 15-203 (384)
92 3o0g_A Cell division protein k 100.0 2.9E-31 1E-35 278.7 17.0 184 593-785 2-188 (292)
93 2psq_A Fibroblast growth facto 100.0 1.9E-31 6.4E-36 289.6 15.9 190 592-785 80-291 (370)
94 1jl5_A Outer protein YOPM; leu 100.0 9.5E-31 3.2E-35 291.2 21.7 323 69-451 12-370 (454)
95 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.6E-31 5.6E-36 287.3 14.5 181 593-785 41-224 (350)
96 2i0e_A Protein kinase C-beta I 100.0 1.5E-31 5E-36 287.6 13.9 185 592-785 19-207 (353)
97 2qkw_B Protein kinase; three-h 100.0 7.6E-32 2.6E-36 287.3 11.4 196 584-785 30-227 (321)
98 2y0a_A Death-associated protei 100.0 5E-31 1.7E-35 281.3 17.7 185 591-785 9-203 (326)
99 1xku_A Decorin; proteoglycan, 100.0 4.4E-30 1.5E-34 274.7 24.9 278 57-429 31-330 (330)
100 3zyi_A Leucine-rich repeat-con 100.0 3.1E-30 1.1E-34 288.3 24.7 248 72-434 58-306 (452)
101 2c30_A Serine/threonine-protei 100.0 6.6E-31 2.3E-35 279.7 18.0 179 595-785 47-227 (321)
102 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.4E-31 1.1E-35 274.6 15.1 184 592-785 7-191 (268)
103 2acx_A G protein-coupled recep 100.0 4E-31 1.4E-35 298.3 16.5 186 592-785 183-371 (576)
104 3a62_A Ribosomal protein S6 ki 100.0 2.3E-31 8E-36 284.0 13.8 185 592-785 16-207 (327)
105 4hcu_A Tyrosine-protein kinase 100.0 1.5E-31 5.1E-36 277.4 11.8 183 593-785 10-193 (269)
106 1jl5_A Outer protein YOPM; leu 100.0 1.2E-29 4.1E-34 282.3 27.8 309 68-436 91-416 (454)
107 3tki_A Serine/threonine-protei 100.0 3.4E-31 1.2E-35 282.1 14.6 186 591-785 5-194 (323)
108 1ob3_A PFPK5, cell division co 100.0 2.7E-31 9.3E-36 278.4 13.3 184 593-785 2-187 (288)
109 3kul_A Ephrin type-A receptor 100.0 5E-31 1.7E-35 281.2 15.5 186 592-785 48-240 (325)
110 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.5E-31 2.2E-35 296.1 16.7 189 592-785 184-375 (543)
111 2r5t_A Serine/threonine-protei 100.0 2.4E-31 8.2E-36 288.0 12.2 185 592-785 37-225 (373)
112 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.3E-31 1.1E-35 282.8 12.9 183 592-785 8-194 (336)
113 3gni_B Strad alpha; kinase fol 100.0 1.4E-30 4.9E-35 285.2 18.2 188 592-785 24-223 (389)
114 1kob_A Twitchin; kinase, intra 100.0 2E-30 7E-35 282.1 18.6 184 591-785 49-236 (387)
115 2zv2_A Calcium/calmodulin-depe 100.0 9.9E-31 3.4E-35 275.6 15.5 184 592-785 12-226 (298)
116 3rp9_A Mitogen-activated prote 100.0 4.7E-31 1.6E-35 295.4 13.7 186 591-785 51-270 (458)
117 3oz6_A Mitogen-activated prote 100.0 1.1E-30 3.7E-35 286.0 16.2 186 590-785 6-217 (388)
118 3kk8_A Calcium/calmodulin depe 100.0 1.8E-30 6.3E-35 271.5 17.0 185 591-785 4-193 (284)
119 3soc_A Activin receptor type-2 100.0 5.3E-31 1.8E-35 280.8 12.8 180 593-785 24-224 (322)
120 2vuw_A Serine/threonine-protei 100.0 6.3E-32 2.1E-36 289.9 5.6 178 592-785 19-262 (336)
121 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-30 5.2E-35 275.8 16.1 183 592-785 56-241 (311)
122 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-30 6.3E-35 275.9 16.5 188 592-785 4-195 (317)
123 3n9x_A Phosphotransferase; mal 100.0 1.3E-30 4.6E-35 289.0 16.0 186 591-785 24-238 (432)
124 4euu_A Serine/threonine-protei 100.0 2.5E-30 8.5E-35 275.3 17.2 186 592-785 8-209 (319)
125 3gen_A Tyrosine-protein kinase 100.0 4.8E-31 1.6E-35 275.8 11.5 184 592-785 23-207 (283)
126 3g06_A SSPH2 (leucine-rich rep 100.0 6E-30 2E-34 293.3 21.3 281 50-436 14-302 (622)
127 1luf_A Muscle-specific tyrosin 100.0 5E-31 1.7E-35 283.8 11.5 194 588-785 42-262 (343)
128 3ork_A Serine/threonine protei 100.0 2.9E-31 9.8E-36 281.5 9.4 187 591-785 10-205 (311)
129 3llt_A Serine/threonine kinase 100.0 2.1E-30 7.2E-35 280.9 16.4 190 582-785 24-245 (360)
130 4agu_A Cyclin-dependent kinase 100.0 2.6E-30 8.8E-35 274.2 16.4 185 592-785 2-189 (311)
131 2y94_A 5'-AMP-activated protei 100.0 1.6E-30 5.6E-35 289.6 15.5 184 592-785 15-202 (476)
132 2qol_A Ephrin receptor; recept 100.0 7.5E-31 2.6E-35 285.0 12.5 185 593-785 45-236 (373)
133 2w4o_A Calcium/calmodulin-depe 100.0 1.6E-30 5.5E-35 280.0 14.5 181 591-785 51-236 (349)
134 3dls_A PAS domain-containing s 100.0 9.5E-31 3.2E-35 280.1 12.5 186 590-785 21-216 (335)
135 1x8b_A WEE1HU, WEE1-like prote 100.0 5.1E-30 1.7E-34 268.5 17.8 186 591-785 9-217 (289)
136 3ttj_A Mitogen-activated prote 100.0 1.1E-30 3.9E-35 291.5 13.4 182 591-785 60-249 (464)
137 3tt0_A Basic fibroblast growth 100.0 2.2E-30 7.4E-35 282.8 15.4 190 592-785 68-279 (382)
138 3cbl_A C-FES, proto-oncogene t 100.0 5.5E-31 1.9E-35 286.9 10.5 185 592-784 113-300 (377)
139 3q4u_A Activin receptor type-1 100.0 2.4E-30 8.1E-35 273.1 15.0 183 591-785 6-209 (301)
140 1mp8_A Focal adhesion kinase 1 100.0 7.8E-31 2.7E-35 273.9 11.2 186 591-785 13-203 (281)
141 2izr_A Casein kinase I isoform 100.0 1.8E-30 6.2E-35 277.7 14.0 182 592-785 8-203 (330)
142 3uc3_A Serine/threonine-protei 100.0 1.7E-30 5.8E-35 281.0 13.7 181 592-785 19-204 (361)
143 2a2a_A Death-associated protei 100.0 3.9E-30 1.3E-34 274.0 16.4 185 591-785 10-204 (321)
144 3qup_A Tyrosine-protein kinase 100.0 1.1E-30 3.9E-35 278.5 12.1 194 589-785 19-225 (323)
145 3kn6_A Ribosomal protein S6 ki 100.0 2.7E-30 9.4E-35 275.4 15.0 173 598-784 16-194 (325)
146 3vhe_A Vascular endothelial gr 100.0 1E-30 3.5E-35 283.2 11.8 197 585-785 14-281 (359)
147 3ugc_A Tyrosine-protein kinase 100.0 1E-30 3.5E-35 275.0 11.4 185 592-785 9-203 (295)
148 4ejn_A RAC-alpha serine/threon 100.0 4.6E-31 1.6E-35 294.3 9.1 186 592-785 147-335 (446)
149 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-30 4.8E-35 293.6 13.1 184 592-784 219-404 (495)
150 3l9p_A Anaplastic lymphoma kin 100.0 9.6E-31 3.3E-35 283.8 11.2 190 592-785 70-272 (367)
151 2nru_A Interleukin-1 receptor- 100.0 1.2E-29 4E-34 268.5 19.2 200 580-785 12-220 (307)
152 3lb7_A RAF proto-oncogene seri 100.0 3.8E-30 1.3E-34 272.1 15.1 184 592-785 35-223 (307)
153 3is5_A Calcium-dependent prote 100.0 4.1E-30 1.4E-34 269.0 14.9 186 592-785 21-211 (285)
154 3dbq_A Dual specificity protei 100.0 2E-30 6.9E-35 278.8 12.9 184 592-785 8-206 (343)
155 3kfa_A Tyrosine-protein kinase 100.0 1.1E-30 3.9E-35 273.6 10.5 186 591-785 11-198 (288)
156 1qcf_A Haematopoetic cell kina 100.0 1.4E-30 4.7E-35 290.8 11.6 185 591-785 186-371 (454)
157 2x4f_A Myosin light chain kina 100.0 4.8E-30 1.7E-34 278.5 15.5 179 596-785 92-274 (373)
158 3g33_A Cell division protein k 100.0 6E-30 2.1E-34 270.9 15.9 186 591-785 7-205 (308)
159 3cok_A Serine/threonine-protei 100.0 5.7E-30 2E-34 266.8 15.2 186 592-785 10-198 (278)
160 2ivs_A Proto-oncogene tyrosine 100.0 3.5E-30 1.2E-34 273.5 13.8 190 592-785 22-238 (314)
161 3hko_A Calcium/calmodulin-depe 100.0 2E-30 7E-35 279.3 12.1 195 588-785 21-262 (345)
162 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.6E-30 5.3E-35 278.0 10.9 186 590-785 31-224 (329)
163 3lm5_A Serine/threonine-protei 100.0 3.8E-30 1.3E-34 274.7 14.0 195 583-785 18-219 (327)
164 3pfq_A PKC-B, PKC-beta, protei 100.0 3.7E-30 1.3E-34 299.8 15.0 185 592-785 340-528 (674)
165 1cm8_A Phosphorylated MAP kina 100.0 4.1E-30 1.4E-34 278.7 14.3 181 591-785 23-212 (367)
166 2qr7_A Ribosomal protein S6 ki 100.0 2.3E-30 7.8E-35 277.6 12.0 180 591-785 20-206 (342)
167 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-30 3.9E-35 281.9 9.6 185 593-785 54-248 (355)
168 3f3z_A Calcium/calmodulin-depe 100.0 9.8E-30 3.3E-34 264.9 16.2 182 591-784 7-192 (277)
169 3t9t_A Tyrosine-protein kinase 100.0 2.1E-30 7.2E-35 268.3 11.0 183 593-785 8-191 (267)
170 4e5w_A Tyrosine-protein kinase 100.0 4.5E-30 1.5E-34 271.1 13.7 185 593-785 21-215 (302)
171 2rku_A Serine/threonine-protei 100.0 1.4E-29 4.7E-34 266.3 17.3 185 592-785 14-201 (294)
172 1nxk_A MAP kinase-activated pr 100.0 8.4E-30 2.9E-34 279.3 16.2 179 592-785 60-249 (400)
173 2h34_A Serine/threonine-protei 100.0 6.1E-30 2.1E-34 270.9 14.5 186 592-785 33-221 (309)
174 3fdn_A Serine/threonine-protei 100.0 4.6E-30 1.6E-34 267.7 13.3 183 592-785 8-193 (279)
175 1qpc_A LCK kinase; alpha beta 100.0 6.7E-30 2.3E-34 266.5 14.5 184 592-785 12-196 (279)
176 1rjb_A FL cytokine receptor; k 100.0 6E-30 2.1E-34 275.5 14.5 191 591-785 43-260 (344)
177 2zmd_A Dual specificity protei 100.0 4.5E-30 1.5E-34 280.6 13.7 183 593-785 56-253 (390)
178 2owb_A Serine/threonine-protei 100.0 1.2E-29 4E-34 271.9 16.6 185 592-785 40-227 (335)
179 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.2E-30 1.1E-34 287.5 12.6 183 592-784 183-366 (452)
180 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-29 4.1E-34 282.8 16.9 178 592-784 192-371 (450)
181 1ozn_A Reticulon 4 receptor; N 100.0 2.7E-29 9.2E-34 262.7 18.5 209 62-303 6-217 (285)
182 2eue_A Carbon catabolite derep 100.0 7.2E-30 2.5E-34 265.6 14.0 183 592-785 12-198 (275)
183 3bhy_A Death-associated protei 100.0 1.2E-29 4.2E-34 265.0 15.8 184 592-785 4-197 (283)
184 2pvf_A Fibroblast growth facto 100.0 1E-29 3.6E-34 272.3 15.6 190 592-785 34-245 (334)
185 3lij_A Calcium/calmodulin depe 100.0 4.5E-30 1.5E-34 290.1 13.3 184 591-785 35-223 (494)
186 3mwu_A Calmodulin-domain prote 100.0 5E-30 1.7E-34 289.2 13.5 184 591-785 20-208 (486)
187 1t46_A HOMO sapiens V-KIT hard 100.0 7E-30 2.4E-34 271.0 13.8 190 592-785 22-233 (313)
188 4aaa_A Cyclin-dependent kinase 100.0 8.3E-30 2.8E-34 272.8 14.4 185 592-785 24-211 (331)
189 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-29 5.8E-34 268.7 16.7 183 593-785 30-223 (318)
190 3poz_A Epidermal growth factor 100.0 5.3E-30 1.8E-34 273.7 12.2 184 593-785 15-205 (327)
191 2w5a_A Serine/threonine-protei 100.0 6.2E-30 2.1E-34 266.7 12.3 189 592-785 5-202 (279)
192 3q5i_A Protein kinase; CDPK, m 100.0 2E-29 6.7E-34 285.6 17.3 184 591-785 34-233 (504)
193 2xrw_A Mitogen-activated prote 100.0 1.6E-29 5.5E-34 274.8 15.7 182 591-785 23-212 (371)
194 3mdy_A Bone morphogenetic prot 100.0 1.8E-29 6.3E-34 270.8 16.0 188 585-784 29-237 (337)
195 1p4o_A Insulin-like growth fac 100.0 5.5E-30 1.9E-34 273.0 11.8 193 589-785 21-226 (322)
196 3mi9_A Cell division protein k 100.0 1.6E-29 5.5E-34 272.9 15.5 185 593-785 17-215 (351)
197 3i6u_A CDS1, serine/threonine- 100.0 1.2E-29 4E-34 280.1 14.7 185 590-785 132-330 (419)
198 1csn_A Casein kinase-1; phosph 100.0 2.4E-29 8.3E-34 264.9 16.4 183 591-785 8-204 (298)
199 3a7i_A MST3 kinase, serine/thr 100.0 4.1E-29 1.4E-33 263.9 18.1 183 592-785 21-205 (303)
200 2vgo_A Serine/threonine-protei 100.0 1.6E-29 5.3E-34 264.4 14.7 183 592-785 13-198 (284)
201 3dtc_A Mitogen-activated prote 100.0 1.2E-29 4.1E-34 263.3 13.7 181 592-785 6-200 (271)
202 3kmu_A ILK, integrin-linked ki 100.0 8.6E-30 2.9E-34 264.3 12.5 180 593-785 10-197 (271)
203 2o6q_A Variable lymphocyte rec 100.0 1.5E-28 5E-33 254.8 21.7 218 54-303 2-221 (270)
204 2y7j_A Phosphorylase B kinase 100.0 2.4E-29 8.2E-34 272.6 16.4 192 584-785 85-291 (365)
205 4fvq_A Tyrosine-protein kinase 100.0 7.4E-30 2.5E-34 267.6 12.0 180 592-785 7-204 (289)
206 1u5q_A Serine/threonine protei 100.0 2E-29 7E-34 271.0 15.7 180 593-785 54-239 (348)
207 2wqm_A Serine/threonine-protei 100.0 2.9E-29 1E-33 265.9 16.7 189 592-785 31-222 (310)
208 2yex_A Serine/threonine-protei 100.0 2.4E-29 8.2E-34 261.8 15.6 186 591-785 5-194 (276)
209 4eut_A Serine/threonine-protei 100.0 7.7E-30 2.6E-34 279.8 12.3 186 592-785 8-209 (396)
210 2a19_B Interferon-induced, dou 100.0 1.3E-29 4.6E-34 264.8 13.4 181 591-785 9-207 (284)
211 1t4h_A Serine/threonine-protei 100.0 3.5E-29 1.2E-33 262.6 16.5 181 593-785 26-215 (290)
212 3og7_A AKAP9-BRAF fusion prote 100.0 6.7E-30 2.3E-34 267.9 10.9 185 591-785 22-211 (289)
213 3mtl_A Cell division protein k 100.0 6.1E-30 2.1E-34 272.8 10.7 183 593-785 2-187 (324)
214 3kex_A Receptor tyrosine-prote 100.0 7.4E-30 2.5E-34 272.3 11.3 184 593-785 13-203 (325)
215 3brb_A Proto-oncogene tyrosine 100.0 1.2E-29 4.3E-34 269.2 12.8 196 587-785 28-235 (313)
216 3byv_A Rhoptry kinase; malaria 100.0 3.6E-30 1.2E-34 280.6 8.4 185 592-785 72-299 (377)
217 3nyv_A Calmodulin-domain prote 100.0 1.2E-29 4.1E-34 286.1 13.0 184 591-785 24-213 (484)
218 1ua2_A CAK, cell division prot 100.0 1.7E-29 5.9E-34 271.9 13.6 187 590-785 7-199 (346)
219 3cc6_A Protein tyrosine kinase 100.0 1.8E-29 6.2E-34 263.5 13.1 185 592-785 11-200 (281)
220 2ac3_A MAP kinase-interacting 100.0 1.9E-29 6.7E-34 268.0 13.6 185 591-785 10-212 (316)
221 4f0f_A Serine/threonine-protei 100.0 4.1E-29 1.4E-33 261.6 15.9 181 592-785 18-214 (287)
222 3lxl_A Tyrosine-protein kinase 100.0 3E-29 1E-33 268.0 15.0 184 593-785 23-216 (327)
223 3eqc_A Dual specificity mitoge 100.0 8.1E-30 2.8E-34 276.2 10.8 183 592-785 32-216 (360)
224 3gxj_A TGF-beta receptor type- 100.0 1.5E-30 5.2E-35 274.8 4.8 182 592-785 2-204 (303)
225 1u59_A Tyrosine-protein kinase 100.0 4E-29 1.4E-33 261.7 15.6 184 593-785 9-199 (287)
226 3eb0_A Putative uncharacterize 100.0 4.1E-29 1.4E-33 272.9 16.2 183 590-785 4-228 (383)
227 3op5_A Serine/threonine-protei 100.0 1.1E-29 3.6E-34 275.6 11.5 186 591-784 33-246 (364)
228 2eva_A TAK1 kinase - TAB1 chim 100.0 1.4E-29 4.9E-34 267.7 12.2 180 593-785 8-189 (307)
229 2r3i_A Cell division protein k 100.0 2.4E-29 8.2E-34 265.1 13.9 185 593-785 3-190 (299)
230 2fst_X Mitogen-activated prote 100.0 1.1E-29 3.8E-34 275.0 11.5 181 591-785 27-216 (367)
231 1zy4_A Serine/threonine-protei 100.0 2.7E-29 9.4E-34 265.0 14.1 185 591-785 4-217 (303)
232 2i1m_A Macrophage colony-stimu 100.0 2.1E-29 7.3E-34 269.9 13.4 191 591-785 44-252 (333)
233 1mqb_A Ephrin type-A receptor 100.0 3.5E-29 1.2E-33 267.9 14.9 186 592-785 43-236 (333)
234 2h8h_A Proto-oncogene tyrosine 100.0 7E-30 2.4E-34 290.5 10.0 185 591-785 265-450 (535)
235 1xbb_A Tyrosine-protein kinase 100.0 3.1E-29 1.1E-33 263.2 13.9 185 592-785 15-206 (291)
236 3fme_A Dual specificity mitoge 100.0 2.5E-29 8.5E-34 263.7 13.2 187 592-785 6-199 (290)
237 3pg1_A Mitogen-activated prote 100.0 2.9E-29 1E-33 272.1 14.0 192 584-785 13-220 (362)
238 3f66_A Hepatocyte growth facto 100.0 2.9E-29 9.8E-34 264.4 13.3 185 593-785 25-218 (298)
239 2h6d_A 5'-AMP-activated protei 100.0 3.1E-29 1.1E-33 260.9 13.4 185 591-785 9-197 (276)
240 2jam_A Calcium/calmodulin-depe 100.0 2.7E-29 9.2E-34 265.4 13.1 182 591-785 7-193 (304)
241 2xir_A Vascular endothelial gr 100.0 2E-29 6.8E-34 267.9 12.1 196 586-785 20-236 (316)
242 1b6c_B TGF-B superfamily recep 100.0 6.3E-29 2.1E-33 267.3 16.1 189 585-785 34-243 (342)
243 3com_A Serine/threonine-protei 100.0 7.2E-29 2.5E-33 263.4 16.4 184 590-785 26-211 (314)
244 3kvw_A DYRK2, dual specificity 100.0 6.6E-29 2.3E-33 274.8 16.7 181 591-785 95-285 (429)
245 3c1x_A Hepatocyte growth facto 100.0 1.8E-29 6.2E-34 273.8 11.7 184 594-785 90-282 (373)
246 2z80_A TOLL-like receptor 2, v 100.0 4E-29 1.4E-33 269.9 14.3 272 93-455 32-318 (353)
247 3g2f_A Bone morphogenetic prot 100.0 2E-29 6.7E-34 270.5 11.7 182 592-785 12-221 (336)
248 1fvr_A Tyrosine-protein kinase 100.0 3.8E-29 1.3E-33 267.2 13.7 187 593-785 25-227 (327)
249 3zyj_A Leucine-rich repeat-con 100.0 9.6E-28 3.3E-32 267.1 25.1 246 94-455 45-296 (440)
250 3qyz_A Mitogen-activated prote 100.0 7.2E-29 2.5E-33 269.0 15.3 184 591-785 25-218 (364)
251 2x7f_A TRAF2 and NCK-interacti 100.0 4.2E-29 1.4E-33 266.7 13.1 189 587-785 18-220 (326)
252 3nsz_A CK II alpha, casein kin 100.0 1.1E-28 3.7E-33 264.0 16.2 175 593-785 36-217 (330)
253 2ycf_A Serine/threonine-protei 100.0 4.2E-29 1.4E-33 266.2 12.9 184 591-785 8-205 (322)
254 3pls_A Macrophage-stimulating 100.0 6E-29 2.1E-33 261.8 13.9 184 594-785 22-214 (298)
255 3lzb_A Epidermal growth factor 100.0 3.4E-29 1.2E-33 267.2 11.8 185 592-785 14-205 (327)
256 1phk_A Phosphorylase kinase; g 100.0 1.4E-28 4.7E-33 259.1 16.2 186 590-785 14-215 (298)
257 2buj_A Serine/threonine-protei 100.0 7.2E-29 2.5E-33 263.8 14.1 188 592-785 28-232 (317)
258 4exu_A Mitogen-activated prote 100.0 6.4E-29 2.2E-33 270.0 14.0 180 591-785 40-228 (371)
259 3an0_A Dual specificity mitoge 100.0 4.7E-29 1.6E-33 268.0 12.7 189 590-785 48-243 (340)
260 2v62_A Serine/threonine-protei 100.0 2.5E-29 8.7E-34 270.5 10.6 185 592-785 36-246 (345)
261 2w1i_A JAK2; chromosomal rearr 100.0 6.7E-29 2.3E-33 265.1 13.6 185 592-785 40-234 (326)
262 1wwl_A Monocyte differentiatio 100.0 1.6E-30 5.4E-35 275.6 1.0 57 371-432 254-310 (312)
263 4fcg_A Uncharacterized protein 100.0 3.6E-28 1.2E-32 259.0 19.1 201 68-300 104-314 (328)
264 2ozo_A Tyrosine-protein kinase 100.0 5.9E-29 2E-33 287.0 13.8 184 593-785 335-525 (613)
265 4fl3_A Tyrosine-protein kinase 100.0 4.8E-29 1.6E-33 288.4 12.9 178 599-785 375-558 (635)
266 2z66_A Variable lymphocyte rec 100.0 1E-27 3.6E-32 253.4 21.9 247 95-455 10-265 (306)
267 1blx_A Cyclin-dependent kinase 100.0 8.9E-29 3.1E-33 264.2 13.8 186 591-785 9-205 (326)
268 3q60_A ROP5B; pseudokinase, tr 100.0 7.3E-29 2.5E-33 269.7 13.3 181 593-785 62-279 (371)
269 3o53_A Protein LRIM1, AGAP0063 100.0 1.9E-30 6.5E-35 275.7 0.6 267 68-436 10-281 (317)
270 1j1b_A Glycogen synthase kinas 100.0 1.5E-28 5.2E-33 271.3 15.7 180 593-785 54-243 (420)
271 4hgt_A Casein kinase I isoform 100.0 1.5E-28 5.3E-33 258.4 15.0 184 590-785 6-201 (296)
272 2clq_A Mitogen-activated prote 100.0 2.6E-28 8.9E-33 256.6 16.7 185 593-785 22-211 (295)
273 2yfx_A Tyrosine-protein kinase 100.0 6.2E-29 2.1E-33 265.5 12.1 190 592-785 29-231 (327)
274 3zyi_A Leucine-rich repeat-con 100.0 2E-27 6.9E-32 265.5 24.6 247 94-455 56-307 (452)
275 2pml_X PFPK7, Ser/Thr protein 100.0 6.8E-29 2.3E-33 267.7 12.3 189 591-785 29-238 (348)
276 3rgf_A Cyclin-dependent kinase 100.0 5.3E-29 1.8E-33 274.1 11.5 186 592-785 19-222 (405)
277 2wei_A Calmodulin-domain prote 100.0 1.1E-28 3.9E-33 258.3 13.4 186 590-785 19-208 (287)
278 2vwi_A Serine/threonine-protei 100.0 2.6E-29 9E-34 265.2 8.6 190 592-785 14-213 (303)
279 4e7w_A Glycogen synthase kinas 100.0 1.8E-28 6.3E-33 268.4 15.6 181 592-785 39-228 (394)
280 1z57_A Dual specificity protei 100.0 2.5E-28 8.6E-33 262.0 16.2 181 591-785 12-220 (339)
281 2b9h_A MAP kinase FUS3, mitoge 100.0 2E-28 6.7E-33 264.6 15.4 184 591-785 9-209 (353)
282 1wak_A Serine/threonine-protei 100.0 1.4E-28 4.7E-33 270.4 14.3 181 591-785 35-279 (397)
283 2jii_A Serine/threonine-protei 100.0 3.9E-29 1.3E-33 269.9 9.8 180 592-785 41-254 (352)
284 2wtk_C Serine/threonine-protei 100.0 2.4E-28 8.2E-33 258.2 15.6 188 591-785 3-199 (305)
285 3uzp_A CKI-delta, CKID, casein 100.0 2.6E-28 9E-33 256.7 15.8 183 591-785 7-201 (296)
286 1ozn_A Reticulon 4 receptor; N 100.0 1.7E-27 6E-32 248.9 21.8 177 95-302 14-192 (285)
287 2j7t_A Serine/threonine-protei 100.0 5.9E-29 2E-33 262.5 10.1 185 591-785 17-208 (302)
288 1byg_A CSK, protein (C-termina 100.0 8.3E-29 2.8E-33 258.0 11.1 179 592-785 20-200 (278)
289 3e3p_A Protein kinase, putativ 100.0 1.8E-28 6.3E-33 265.6 13.8 189 587-785 17-218 (360)
290 3coi_A Mitogen-activated prote 100.0 1.6E-28 5.6E-33 265.2 13.1 180 591-785 22-210 (353)
291 1wwl_A Monocyte differentiatio 100.0 4E-30 1.4E-34 272.5 0.3 263 50-408 23-310 (312)
292 3cek_A Dual specificity protei 100.0 7.7E-29 2.6E-33 263.0 10.1 189 587-785 22-225 (313)
293 2j0j_A Focal adhesion kinase 1 100.0 1.7E-28 5.7E-33 284.9 13.7 187 590-785 387-578 (656)
294 3ll6_A Cyclin G-associated kin 100.0 2.8E-28 9.6E-33 261.5 14.3 186 592-785 27-239 (337)
295 3aln_A Dual specificity mitoge 100.0 2.5E-28 8.6E-33 260.8 13.7 187 592-785 21-215 (327)
296 1u46_A ACK-1, activated CDC42 100.0 1.3E-28 4.6E-33 258.2 11.2 185 593-785 18-210 (291)
297 4azs_A Methyltransferase WBDD; 100.0 1.2E-28 4.3E-33 280.6 11.5 174 600-785 241-424 (569)
298 2vx3_A Dual specificity tyrosi 100.0 5.1E-28 1.7E-32 264.1 15.3 186 588-785 49-244 (382)
299 3a99_A Proto-oncogene serine/t 99.9 1.7E-28 5.7E-33 261.2 10.7 189 586-785 36-235 (320)
300 2pzi_A Probable serine/threoni 99.9 2.2E-28 7.5E-33 286.9 12.4 178 591-785 78-262 (681)
301 2i6l_A Mitogen-activated prote 99.9 4.7E-28 1.6E-32 257.7 13.8 183 591-785 9-211 (320)
302 3sv0_A Casein kinase I-like; t 99.9 1.2E-27 4.1E-32 267.0 17.5 183 591-785 5-199 (483)
303 2iwi_A Serine/threonine-protei 99.9 1.6E-28 5.5E-33 260.5 8.7 188 587-785 25-225 (312)
304 2eu9_A Dual specificity protei 99.9 1.3E-27 4.3E-32 258.3 15.8 181 591-785 17-225 (355)
305 3fhr_A MAP kinase-activated pr 99.9 1E-27 3.5E-32 256.8 14.7 180 591-785 26-215 (336)
306 3oja_A Leucine-rich immune mol 99.9 8.6E-29 2.9E-33 278.2 5.6 218 92-435 34-255 (487)
307 2rio_A Serine/threonine-protei 99.9 6.9E-28 2.4E-32 267.2 12.6 184 593-785 15-225 (434)
308 3o53_A Protein LRIM1, AGAP0063 99.9 8.6E-29 2.9E-33 262.9 4.4 249 68-415 34-284 (317)
309 2y4i_B KSR2, HKSR2, kinase sup 99.9 1.2E-28 4.1E-33 262.3 5.5 188 588-785 28-229 (319)
310 1q8y_A SR protein kinase; tran 99.9 9.7E-28 3.3E-32 261.2 12.4 180 592-785 18-221 (373)
311 3p23_A Serine/threonine-protei 99.9 1.4E-27 4.9E-32 263.8 12.9 180 593-785 24-215 (432)
312 3qa8_A MGC80376 protein; kinas 99.9 4.5E-28 1.5E-32 276.0 8.6 186 592-785 13-209 (676)
313 2dyl_A Dual specificity mitoge 99.9 1.9E-27 6.6E-32 252.8 12.2 185 592-785 24-215 (318)
314 3g06_A SSPH2 (leucine-rich rep 99.9 2.5E-25 8.7E-30 254.9 28.5 255 92-452 40-298 (622)
315 3oja_A Leucine-rich immune mol 99.9 1E-27 3.5E-32 269.4 7.6 195 69-302 35-229 (487)
316 2z62_A TOLL-like receptor 4, v 99.9 5.5E-26 1.9E-30 236.3 18.3 208 69-305 29-242 (276)
317 2z62_A TOLL-like receptor 4, v 99.9 1.6E-25 5.3E-30 232.9 20.2 76 75-153 14-90 (276)
318 1z7x_W Ribonuclease inhibitor; 99.9 9.2E-29 3.1E-33 277.5 -8.5 330 69-433 29-413 (461)
319 3rfs_A Internalin B, repeat mo 99.9 2.3E-25 7.7E-30 231.0 16.3 179 89-299 38-217 (272)
320 3uqc_A Probable conserved tran 99.9 1.5E-25 5E-30 234.0 14.6 143 592-744 30-174 (286)
321 3en9_A Glycoprotease, O-sialog 99.9 9.5E-27 3.2E-31 263.7 6.0 171 596-785 339-524 (540)
322 1p9a_G Platelet glycoprotein I 99.9 9.2E-25 3.1E-29 228.2 19.8 201 64-300 6-208 (290)
323 3dzo_A Rhoptry kinase domain; 99.9 3.9E-26 1.3E-30 251.4 9.3 184 593-785 78-303 (413)
324 3m19_A Variable lymphocyte rec 99.9 9.4E-25 3.2E-29 223.5 18.9 192 55-304 3-196 (251)
325 1z7x_W Ribonuclease inhibitor; 99.9 5.9E-29 2E-33 279.1 -14.5 349 68-450 3-410 (461)
326 2o6q_A Variable lymphocyte rec 99.9 6.7E-24 2.3E-28 219.7 23.3 178 93-302 17-196 (270)
327 3rfs_A Internalin B, repeat mo 99.9 1.8E-24 6.3E-29 224.1 16.9 201 68-307 41-242 (272)
328 3m2w_A MAP kinase-activated pr 99.9 1.4E-24 4.7E-29 228.6 16.1 146 592-750 16-171 (299)
329 1p9a_G Platelet glycoprotein I 99.9 5.1E-24 1.8E-28 222.6 19.8 204 110-432 5-209 (290)
330 2xwt_C Thyrotropin receptor; s 99.9 3.6E-24 1.2E-28 217.4 16.6 189 83-305 25-223 (239)
331 4glp_A Monocyte differentiatio 99.9 5.9E-25 2E-29 232.6 8.3 227 93-432 65-308 (310)
332 3goz_A Leucine-rich repeat-con 99.9 3.9E-26 1.3E-30 247.2 -1.5 259 97-433 3-299 (362)
333 2xwt_C Thyrotropin receptor; s 99.9 4E-24 1.4E-28 217.2 13.1 195 68-297 31-236 (239)
334 4glp_A Monocyte differentiatio 99.9 2.5E-24 8.4E-29 227.8 10.5 226 69-323 65-307 (310)
335 1h6u_A Internalin H; cell adhe 99.9 1.7E-23 5.7E-28 220.9 16.8 190 69-301 42-231 (308)
336 3m19_A Variable lymphocyte rec 99.9 9.4E-23 3.2E-27 208.6 20.5 177 93-324 15-193 (251)
337 2ast_B S-phase kinase-associat 99.9 4E-26 1.4E-30 244.7 -5.7 211 55-298 35-258 (336)
338 1h6u_A Internalin H; cell adhe 99.9 3.1E-23 1.1E-27 218.8 16.1 198 88-327 37-234 (308)
339 3goz_A Leucine-rich repeat-con 99.9 2.3E-25 7.8E-30 241.1 -1.1 266 72-415 2-305 (362)
340 4ay9_X Follicle-stimulating ho 99.9 9.3E-23 3.2E-27 219.5 18.0 204 57-304 9-219 (350)
341 3cvr_A Invasion plasmid antige 99.9 3.4E-23 1.2E-27 234.4 14.8 200 50-305 35-248 (571)
342 2ca6_A RAN GTPase-activating p 99.9 1E-25 3.5E-30 246.3 -6.2 251 83-435 23-320 (386)
343 1zar_A RIO2 kinase; serine kin 99.9 2.1E-23 7.3E-28 216.4 10.3 156 585-774 82-253 (282)
344 2o6s_A Variable lymphocyte rec 99.9 9.1E-23 3.1E-27 202.4 14.3 183 57-288 7-190 (208)
345 4ay9_X Follicle-stimulating ho 99.9 2.8E-22 9.6E-27 215.7 16.0 177 95-303 12-194 (350)
346 3cvr_A Invasion plasmid antige 99.9 5.8E-22 2E-26 224.3 15.7 196 116-419 60-255 (571)
347 4b8c_D Glucose-repressible alc 99.9 6.4E-23 2.2E-27 240.8 4.0 225 28-305 129-359 (727)
348 2o6s_A Variable lymphocyte rec 99.9 2.8E-21 9.6E-26 191.6 14.9 104 95-203 10-113 (208)
349 2ca6_A RAN GTPase-activating p 99.8 4E-23 1.4E-27 225.7 -2.2 205 68-301 32-288 (386)
350 3e6j_A Variable lymphocyte rec 99.8 1.3E-20 4.6E-25 189.5 15.4 154 50-207 12-176 (229)
351 1h6t_A Internalin B; cell adhe 99.8 1.5E-20 5.2E-25 196.4 14.6 175 89-304 43-217 (291)
352 2ast_B S-phase kinase-associat 99.8 1.5E-22 5.2E-27 216.8 -0.8 201 68-297 70-282 (336)
353 1m9s_A Internalin B; cell inva 99.8 1.7E-20 5.8E-25 214.7 14.4 189 74-305 27-215 (605)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 9.3E-20 3.2E-24 182.0 16.5 152 72-255 15-168 (220)
355 2xot_A Amphoterin-induced prot 99.8 3.8E-20 1.3E-24 199.9 13.0 173 72-300 22-202 (361)
356 1m9s_A Internalin B; cell inva 99.8 1.9E-20 6.4E-25 214.4 9.0 181 91-313 20-200 (605)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 2.9E-19 9.9E-24 178.4 15.8 153 95-302 14-168 (220)
358 2v9t_B SLIT homolog 2 protein 99.8 3.7E-19 1.3E-23 177.7 16.1 77 73-152 16-93 (220)
359 2v9t_B SLIT homolog 2 protein 99.8 3.7E-19 1.3E-23 177.7 16.0 145 57-204 11-166 (220)
360 1h6t_A Internalin B; cell adhe 99.8 7.3E-20 2.5E-24 191.2 11.2 169 68-277 46-214 (291)
361 2xot_A Amphoterin-induced prot 99.8 9.3E-20 3.2E-24 196.8 11.9 148 57-205 18-178 (361)
362 1zth_A RIO1 serine protein kin 99.8 1.4E-19 4.9E-24 185.4 11.4 141 594-751 48-221 (258)
363 3ogk_B Coronatine-insensitive 99.8 3.6E-22 1.2E-26 231.2 -9.1 324 68-433 164-528 (592)
364 3ogk_B Coronatine-insensitive 99.8 4E-22 1.4E-26 230.8 -9.0 225 68-295 73-326 (592)
365 3e6j_A Variable lymphocyte rec 99.8 1.4E-18 4.9E-23 174.6 16.8 152 95-302 22-174 (229)
366 1xeu_A Internalin C; cellular 99.8 1.6E-19 5.5E-24 185.5 7.7 174 90-305 17-190 (263)
367 4ezg_A Putative uncharacterize 99.8 5.5E-19 1.9E-23 173.3 11.0 155 112-301 41-195 (197)
368 1dce_A Protein (RAB geranylger 99.8 1.3E-21 4.4E-26 222.7 -10.3 59 241-301 442-500 (567)
369 2p1m_B Transport inhibitor res 99.8 4.3E-22 1.5E-26 230.6 -14.9 364 68-449 105-517 (594)
370 1dce_A Protein (RAB geranylger 99.8 2E-21 6.7E-26 221.2 -9.6 183 89-305 346-551 (567)
371 4ezg_A Putative uncharacterize 99.8 9.5E-19 3.3E-23 171.6 10.2 154 89-276 41-194 (197)
372 1xeu_A Internalin C; cellular 99.8 1.2E-18 4.1E-23 179.0 9.8 167 70-278 21-187 (263)
373 4b8c_D Glucose-repressible alc 99.8 8.3E-20 2.8E-24 214.4 1.0 225 92-432 173-405 (727)
374 1w8a_A SLIT protein; signaling 99.7 9.7E-18 3.3E-22 163.5 8.8 131 71-207 11-143 (192)
375 1w8a_A SLIT protein; signaling 99.7 3.7E-17 1.3E-21 159.4 13.0 124 57-181 8-143 (192)
376 2p1m_B Transport inhibitor res 99.7 2E-20 6.8E-25 216.6 -12.3 321 68-432 130-520 (594)
377 2ell_A Acidic leucine-rich nuc 99.7 3.6E-17 1.2E-21 155.9 9.2 137 68-208 24-164 (168)
378 2o6r_A Variable lymphocyte rec 99.7 1.6E-16 5.5E-21 152.8 13.3 134 57-207 7-141 (177)
379 4gyi_A RIO2 kinase; protein ki 99.7 1.9E-17 6.5E-22 175.6 6.3 150 586-751 88-267 (397)
380 2wfh_A SLIT homolog 2 protein 99.7 4E-16 1.4E-20 152.0 13.7 127 72-204 14-140 (193)
381 2ell_A Acidic leucine-rich nuc 99.7 1.8E-16 6.3E-21 150.9 9.8 136 139-304 24-164 (168)
382 2je0_A Acidic leucine-rich nuc 99.7 6.5E-17 2.2E-21 150.7 6.0 129 68-199 17-149 (149)
383 2wfh_A SLIT homolog 2 protein 99.6 1.8E-15 6E-20 147.4 15.0 84 118-208 13-96 (193)
384 2o6r_A Variable lymphocyte rec 99.6 1.9E-15 6.4E-20 145.2 14.0 133 94-257 9-141 (177)
385 3sb4_A Hypothetical leucine ri 99.6 2.4E-16 8.1E-21 167.8 7.2 229 129-425 83-328 (329)
386 2je0_A Acidic leucine-rich nuc 99.6 7.6E-16 2.6E-20 143.4 7.9 129 90-249 15-149 (149)
387 1a9n_A U2A', U2A'; complex (nu 99.6 2.8E-15 9.4E-20 143.9 7.6 130 67-204 18-154 (176)
388 1a9n_A U2A', U2A'; complex (nu 99.6 4.2E-15 1.4E-19 142.7 8.7 134 135-301 15-154 (176)
389 4fdw_A Leucine rich hypothetic 99.5 2.6E-13 8.8E-18 147.5 21.5 169 92-299 113-283 (401)
390 1ds9_A Outer arm dynein; leuci 99.5 4.5E-17 1.5E-21 159.7 -8.6 131 134-300 43-185 (198)
391 3sb4_A Hypothetical leucine ri 99.5 2.5E-14 8.5E-19 152.2 11.7 98 189-314 225-325 (329)
392 1ds9_A Outer arm dynein; leuci 99.5 4.8E-17 1.6E-21 159.5 -10.2 134 68-208 18-158 (198)
393 3g39_A Variable lymphocyte rec 99.5 7E-14 2.4E-18 133.1 11.8 105 71-179 12-117 (170)
394 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.1E-18 131.9 13.2 103 71-178 15-119 (174)
395 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.8E-18 131.7 12.1 109 94-207 11-119 (170)
396 2r9u_A Variable lymphocyte rec 99.5 3E-13 1E-17 129.1 12.6 105 95-205 15-120 (174)
397 4fdw_A Leucine rich hypothetic 99.5 2.1E-12 7.1E-17 140.4 20.1 261 70-431 115-383 (401)
398 2ifg_A High affinity nerve gro 99.3 1E-12 3.5E-17 140.8 8.6 84 57-153 8-94 (347)
399 3tm0_A Aminoglycoside 3'-phosp 99.3 5.8E-12 2E-16 129.2 12.9 148 589-749 10-214 (263)
400 2ifg_A High affinity nerve gro 99.3 7.2E-12 2.5E-16 134.2 10.7 105 95-204 11-117 (347)
401 3un9_A NLR family member X1; l 99.3 4E-14 1.4E-18 152.4 -7.9 65 237-301 180-253 (372)
402 3un9_A NLR family member X1; l 99.2 3.6E-14 1.2E-18 152.8 -10.4 39 262-300 154-196 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.2 1.7E-11 5.7E-16 125.5 8.6 140 592-749 19-215 (264)
404 4fs7_A Uncharacterized protein 99.2 1E-09 3.5E-14 119.4 21.2 289 86-428 65-376 (394)
405 3dxp_A Putative acyl-COA dehyd 99.0 5.5E-10 1.9E-14 120.0 11.2 144 597-749 42-249 (359)
406 4fs7_A Uncharacterized protein 99.0 5.2E-09 1.8E-13 113.8 18.9 272 104-428 59-353 (394)
407 4gt6_A Cell surface protein; l 99.0 3.3E-08 1.1E-12 107.5 22.0 36 259-295 261-296 (394)
408 2ra8_A Uncharacterized protein 98.9 9.3E-11 3.2E-15 125.0 0.5 102 67-172 106-227 (362)
409 4gt6_A Cell surface protein; l 98.9 1.7E-07 5.8E-12 101.8 22.8 294 86-430 57-369 (394)
410 2ra8_A Uncharacterized protein 98.8 5E-10 1.7E-14 119.3 1.2 57 371-429 280-341 (362)
411 3rw6_A Nuclear RNA export fact 98.7 1.3E-10 4.4E-15 117.4 -7.8 23 55-77 76-99 (267)
412 3r70_A Aminoglycoside phosphot 98.7 7.2E-08 2.5E-12 101.5 12.8 137 594-749 38-238 (320)
413 3sg8_A APH(2'')-ID; antibiotic 98.6 9.3E-08 3.2E-12 99.9 10.3 137 598-749 25-224 (304)
414 4gkh_A Aminoglycoside 3'-phosp 98.6 4E-07 1.4E-11 93.3 13.5 136 600-749 31-224 (272)
415 4h09_A Hypothetical leucine ri 98.6 3.8E-06 1.3E-10 90.5 21.9 296 68-428 46-343 (379)
416 3tdw_A Gentamicin resistance p 98.6 5.8E-07 2E-11 93.8 14.7 137 598-749 24-225 (306)
417 3d1u_A Putative fructosamine-3 98.5 6.8E-07 2.3E-11 92.1 12.8 78 595-678 17-97 (288)
418 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.8E-06 6.2E-11 92.2 14.2 147 595-749 43-244 (362)
419 1io0_A Tropomodulin; LRR prote 98.3 7.3E-08 2.5E-12 92.5 -0.8 70 83-152 27-106 (185)
420 3ats_A Putative uncharacterize 98.3 1.5E-06 5.2E-11 92.9 8.8 82 598-679 25-121 (357)
421 1io0_A Tropomodulin; LRR prote 98.2 7.1E-08 2.4E-12 92.6 -2.1 64 237-300 90-164 (185)
422 3rw6_A Nuclear RNA export fact 98.2 6.6E-07 2.3E-11 90.2 4.4 104 88-196 137-257 (267)
423 4h09_A Hypothetical leucine ri 98.1 0.00013 4.4E-09 78.4 19.6 265 87-428 41-320 (379)
424 2q83_A YTAA protein; 2635576, 98.1 3.4E-05 1.1E-09 81.7 14.2 145 598-749 37-253 (346)
425 2olc_A MTR kinase, methylthior 97.9 2.8E-05 9.4E-10 84.3 11.0 77 598-676 35-120 (397)
426 3jr1_A Putative fructosamine-3 97.9 8.6E-05 3E-09 77.0 12.3 141 597-744 40-232 (312)
427 3f7w_A Putative fructosamine-3 97.8 0.00016 5.5E-09 74.4 12.6 79 594-678 16-97 (288)
428 2pyw_A Uncharacterized protein 97.7 0.00019 6.6E-09 78.2 13.1 75 598-675 39-122 (420)
429 2ppq_A HSK, HK, homoserine kin 97.7 0.00033 1.1E-08 73.3 13.1 159 585-748 9-217 (322)
430 3e4g_A ATP synthase subunit S, 97.5 3E-05 1E-09 72.3 1.7 58 92-149 61-124 (176)
431 3csv_A Aminoglycoside phosphot 97.4 0.00031 1.1E-08 73.9 9.1 144 599-749 24-218 (333)
432 3rfe_A Platelet glycoprotein I 97.4 0.00026 8.8E-09 63.0 6.6 55 96-152 12-68 (130)
433 1zyl_A Hypothetical protein YI 97.4 0.00087 3E-08 70.2 11.9 145 599-749 32-224 (328)
434 3dxq_A Choline/ethanolamine ki 97.4 0.0004 1.4E-08 71.9 9.0 141 598-749 23-203 (301)
435 3e4g_A ATP synthase subunit S, 97.3 3.8E-05 1.3E-09 71.7 0.7 83 68-150 61-150 (176)
436 1nw1_A Choline kinase (49.2 KD 97.2 0.00061 2.1E-08 74.2 8.5 73 598-678 78-159 (429)
437 3feg_A Choline/ethanolamine ki 97.1 0.00096 3.3E-08 71.0 9.0 144 598-748 55-254 (379)
438 3rfe_A Platelet glycoprotein I 97.0 0.00096 3.3E-08 59.2 6.7 56 243-300 11-68 (130)
439 2qg7_A Ethanolamine kinase PV0 97.0 0.0035 1.2E-07 68.6 11.9 74 598-678 113-188 (458)
440 3c5i_A Choline kinase; choline 96.9 0.0012 4.1E-08 70.5 7.6 74 598-678 38-121 (369)
441 3i1a_A Spectinomycin phosphotr 96.9 0.0049 1.7E-07 64.8 11.9 32 718-749 206-237 (339)
442 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00024 8.3E-09 67.5 -0.7 65 236-300 94-170 (197)
443 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00036 1.2E-08 66.4 0.2 112 89-202 38-169 (197)
444 3f2s_A CK, chetk-alpha, cholin 96.3 0.011 3.6E-07 63.2 9.4 147 598-748 57-280 (401)
445 3mes_A Choline kinase; malaria 95.7 0.027 9.4E-07 60.6 9.6 143 598-748 75-291 (424)
446 3g15_A CK, chetk-alpha, cholin 93.1 0.26 8.8E-06 52.8 9.4 30 719-748 245-280 (401)
447 4ano_A ESSB; membrane protein, 83.8 2 6.9E-05 41.0 6.8 86 649-749 48-134 (219)
448 3cxl_A N-chimerin; SH2, RHO-GA 82.7 0.14 4.8E-06 55.9 -2.0 64 596-662 145-215 (463)
449 4ann_A ESSB; membrane protein, 79.3 2 6.8E-05 40.9 4.9 87 649-749 43-129 (215)
450 2ks1_B Epidermal growth factor 70.2 1.1 3.7E-05 30.5 0.4 24 494-517 15-38 (44)
451 2l2t_A Receptor tyrosine-prote 67.5 1.2 4.1E-05 30.2 0.2 24 494-517 14-37 (44)
452 2lz0_A Uncharacterized protein 49.6 20 0.00069 29.3 4.7 36 111-147 16-51 (100)
453 2lz0_A Uncharacterized protein 43.0 26 0.00088 28.6 4.3 49 124-174 5-53 (100)
454 3ls8_A Phosphatidylinositol 3- 42.7 1.9E+02 0.0066 32.0 12.5 86 654-747 402-501 (614)
455 1cja_A Protein (actin-fragmin 42.1 99 0.0034 31.4 9.2 141 595-749 71-238 (342)
456 2k1k_A Ephrin type-A receptor 41.8 5.8 0.0002 26.0 0.1 18 494-511 15-32 (38)
457 2x6h_A GH13170P, VPS34, phosph 21.2 48 0.0016 37.5 3.1 45 696-747 529-575 (696)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.8e-49 Score=470.14 Aligned_cols=96 Identities=28% Similarity=0.430 Sum_probs=80.8
Q ss_pred ccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC---CCCCce
Q 003911 366 TCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS---FKSNAI 442 (787)
Q Consensus 366 ~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~---~~~~~~ 442 (787)
+..++.|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..++.+++|++|||++|+|+|.||. |..+..
T Consensus 652 l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~ 731 (768)
T 3rgz_A 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPP 731 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCG
T ss_pred HhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCH
Confidence 44556788888888888888888888899999999999999999999999999999999999999999996 555667
Q ss_pred eecCCCCCCCCCCCCCCCCC
Q 003911 443 VNTDGNPDIGKEKSSSFQGS 462 (787)
Q Consensus 443 ~~~~gn~~~~~~~~~~~~~~ 462 (787)
..+.|||++|+.|.. .|..
T Consensus 732 ~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 732 AKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp GGGCSCTEEESTTSC-CCCS
T ss_pred HHhcCCchhcCCCCc-CCCC
Confidence 789999999998875 6643
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.1e-46 Score=436.44 Aligned_cols=403 Identities=19% Similarity=0.237 Sum_probs=289.8
Q ss_pred ChhHHHHHHHHHHhcCCCCC----------CCCC-CCCCCCc---ccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCC
Q 003911 29 DDGDAAVMLALKKSLNPPES----------LGWS-DTDPCKW---NHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKL 94 (787)
Q Consensus 29 ~~~d~~~l~~~k~~~~~~~~----------~~w~-~~~~C~w---~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L 94 (787)
...|++||.+|+++++++.. .+|+ ++|||.| .||+|+..+||+.|+|++++++|.+|++|++|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 34699999999999976532 2696 5689999 99999988999999999999999999999999999
Q ss_pred cEEEeecCC-----------------------------------------------------------------------
Q 003911 95 ERLELQWNS----------------------------------------------------------------------- 103 (787)
Q Consensus 95 ~~L~L~~N~----------------------------------------------------------------------- 103 (787)
++|+|++|.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999884
Q ss_pred -------CCCCCCCCCCCCCCcEEEcccccCCcC-----------------CCcccc--CCCCCcEEEccCCCCCCCCCC
Q 003911 104 -------ISGPLPSLNGLASLEVVMLSNNQFTSV-----------------PSDFFT--GLSSLQSIEIDNNPFSSWEIP 157 (787)
Q Consensus 104 -------l~~~~~~~~~l~~L~~L~L~~N~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~~p 157 (787)
|+++++.|+++++|++|+|++|+|++. .|..++ ++++|++|+|++|++.+ .+|
T Consensus 188 l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~-~~p 266 (636)
T 4eco_A 188 IGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT-KLP 266 (636)
T ss_dssp TTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS-SCC
T ss_pred hccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc-cCh
Confidence 345333699999999999999999993 445577 99999999999999988 899
Q ss_pred hhhhcCCCCCEEeccCce-ecc-cCCCCCCCCCC------CCCcEEeccccccccCCCc--Cccc-ccccceeeccCCCC
Q 003911 158 QSLRNASGLQNFSANSAN-ITG-QIPSFFGPDEF------PGLTILHLAFNQLIGGLPA--SFSG-SQIQSLWVNGQNGN 226 (787)
Q Consensus 158 ~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~-~~l~~L~~~~~~~~ 226 (787)
..++++++|++|++++|+ ++| .+|..++ .+ ++|++|+|++|+++ .+|. .+.. .+|+.|++.++.
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~--~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~-- 341 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQ--ALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ-- 341 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHH--HHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC--
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHH--hhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc--
Confidence 999999999999999998 998 7887765 54 88999999999998 7887 6654 456666665433
Q ss_pred CcCCCCccccccCccCceEeccccccccCCCCCCCCCC-CCEEecCCCcccccCCccccCCC--CCCEEEccCCcccccC
Q 003911 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQ-LESLSLRDNFFTGPVPDSLVKLE--SLKIVNMTNNLLQGPV 303 (787)
Q Consensus 227 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~ 303 (787)
..+..| .++++++|++|+|++|+++..+..+..+++ |++|+|++|+++ .+|..+..++ +|++|+|++|++++.+
T Consensus 342 -l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~ 418 (636)
T 4eco_A 342 -LEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVD 418 (636)
T ss_dssp -CEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTT
T ss_pred -Cccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcc
Confidence 222334 677888888888888888866667888888 888888888888 7888777655 7888888888888876
Q ss_pred CC-CC-------CceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCcccc---ccCCCce
Q 003911 304 PE-FD-------RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGV---TCTKGNI 372 (787)
Q Consensus 304 p~-~~-------~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~L 372 (787)
|. +. .+.+|+.+++++|.+..+|.........+ ..+ .+..+.....|.....+. .....+|
T Consensus 419 p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L---~~L-----~Ls~N~l~~i~~~~~~~~~~~~~~l~~L 490 (636)
T 4eco_A 419 GKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPL---SSI-----NLMGNMLTEIPKNSLKDENENFKNTYLL 490 (636)
T ss_dssp TCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCC---SEE-----ECCSSCCSBCCSSSSEETTEECTTGGGC
T ss_pred hhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCC---CEE-----ECCCCCCCCcCHHHhccccccccccCCc
Confidence 64 44 55678888888887776553211100000 000 000000001111100000 0011256
Q ss_pred EEEEccCCcccccCchhhc--CCCCCCEEecccccccccCCccCcCCCCCCeeec------cCCcccccCCC----CCCC
Q 003911 373 TVINFQKMNLTGTISPEFA--SFKSLQRLILADNNLSGMIPEGLSVLGALKELDV------SNNQLYGKIPS----FKSN 440 (787)
Q Consensus 373 ~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L------s~N~l~g~iP~----~~~~ 440 (787)
+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|++|+| ++|++.+.+|. +..+
T Consensus 491 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L 568 (636)
T 4eco_A 491 TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSL 568 (636)
T ss_dssp CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCC
Confidence 66666666666 5666665 66666666666666665 6666666666666666 34556666664 4455
Q ss_pred ceeecCCCCC
Q 003911 441 AIVNTDGNPD 450 (787)
Q Consensus 441 ~~~~~~gn~~ 450 (787)
..+.+.+|..
T Consensus 569 ~~L~Ls~N~l 578 (636)
T 4eco_A 569 TQLQIGSNDI 578 (636)
T ss_dssp CEEECCSSCC
T ss_pred CEEECCCCcC
Confidence 5666666654
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.6e-47 Score=446.12 Aligned_cols=402 Identities=18% Similarity=0.244 Sum_probs=310.0
Q ss_pred CCChhHHHHHHHHHHhcCCCCCCCCCC------CCC--CCc------------ccEEEcCCCCEEEEEeCCCCccccCCC
Q 003911 27 SGDDGDAAVMLALKKSLNPPESLGWSD------TDP--CKW------------NHVVCIEDKRITRIQIGHQNLQGTLPS 86 (787)
Q Consensus 27 ~~~~~d~~~l~~~k~~~~~~~~~~w~~------~~~--C~w------------~gv~C~~~~~v~~L~l~~~~l~~~~~~ 86 (787)
++...|++||++||+++.+| +|+. .+| |.| .||+|+..+||+.|+|+++++.|.+|+
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred ccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 34467999999999999877 6742 356 999 999999889999999999999999999
Q ss_pred CCCCCCCCcEEEe-ecCCCCCC----------------------------------------------------------
Q 003911 87 NLQNLTKLERLEL-QWNSISGP---------------------------------------------------------- 107 (787)
Q Consensus 87 ~~~~l~~L~~L~L-~~N~l~~~---------------------------------------------------------- 107 (787)
+|++|++|++|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 9999999999999 77754333
Q ss_pred ------------------CC-CCCCCCCCcEEEcccccCCc------------------CCCcccc--CCCCCcEEEccC
Q 003911 108 ------------------LP-SLNGLASLEVVMLSNNQFTS------------------VPSDFFT--GLSSLQSIEIDN 148 (787)
Q Consensus 108 ------------------~~-~~~~l~~L~~L~L~~N~l~~------------------~~~~~~~--~l~~L~~L~L~~ 148 (787)
+| .|.+|++|++|+|++|+|++ +|+. ++ ++++|++|+|++
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~-l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE-LSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEES
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChh-hhhccCCCCCEEECcC
Confidence 45 68899999999999999999 5554 55 999999999999
Q ss_pred CCCCCCCCChhhhcCCCCCEEeccCce-ecc-cCCCCCC-----CCCCCCCcEEeccccccccCCCc--Cccc-ccccce
Q 003911 149 NPFSSWEIPQSLRNASGLQNFSANSAN-ITG-QIPSFFG-----PDEFPGLTILHLAFNQLIGGLPA--SFSG-SQIQSL 218 (787)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~-----~~~l~~L~~L~L~~N~l~~~~p~--~~~~-~~l~~L 218 (787)
|++.+ .+|..|.++++|+.|++++|+ ++| .+|..++ ...+++|++|+|++|+++ .+|. .+.. .+|+.|
T Consensus 501 N~l~~-~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L 578 (876)
T 4ecn_A 501 CPNMT-QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLL 578 (876)
T ss_dssp CTTCC-SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEE
T ss_pred CCCCc-cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEE
Confidence 99887 899999999999999999998 998 7776543 014569999999999999 8887 6764 567777
Q ss_pred eeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCC-CCEEecCCCcccccCCccccCCCC--CCEEEcc
Q 003911 219 WVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQ-LESLSLRDNFFTGPVPDSLVKLES--LKIVNMT 295 (787)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls 295 (787)
++.++... ..| .|+++++|+.|+|++|+++..++.+..+++ |+.|+|++|+|+ .+|..+..++. |+.|+|+
T Consensus 579 ~Ls~N~l~----~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls 652 (876)
T 4ecn_A 579 DCVHNKVR----HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFS 652 (876)
T ss_dssp ECTTSCCC----BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECC
T ss_pred ECCCCCcc----cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECc
Confidence 77655433 334 788999999999999999966667888998 999999999999 88988887765 9999999
Q ss_pred CCcccccCCCCC------CceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCcccc---c
Q 003911 296 NNLLQGPVPEFD------RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGV---T 366 (787)
Q Consensus 296 ~N~l~~~~p~~~------~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 366 (787)
+|++++.+|.+. ...+|+.+++++|.+..+|.........+ .. + .+..+.....|.....+. .
T Consensus 653 ~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L---~~-L----~Ls~N~L~~ip~~~~~~~~~~l 724 (876)
T 4ecn_A 653 YNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPI---ST-I----ILSNNLMTSIPENSLKPKDGNY 724 (876)
T ss_dssp SSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCC---SE-E----ECCSCCCSCCCTTSSSCTTSCC
T ss_pred CCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCC---CE-E----ECCCCcCCccChHHhccccccc
Confidence 999999887654 44578899999998886653211000000 00 0 000010111111111110 0
Q ss_pred cCCCceEEEEccCCcccccCchhhc--CCCCCCEEecccccccccCCccCcCCCCCCeeeccC------CcccccCCC--
Q 003911 367 CTKGNITVINFQKMNLTGTISPEFA--SFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSN------NQLYGKIPS-- 436 (787)
Q Consensus 367 ~~~~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~------N~l~g~iP~-- 436 (787)
..+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|.
T Consensus 725 ~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l 802 (876)
T 4ecn_A 725 KNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGI 802 (876)
T ss_dssp TTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTG
T ss_pred cccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHH
Confidence 11237888888888888 7787776 88888888888888886 788888888888888866 777888885
Q ss_pred --CCCCceeecCCCCC
Q 003911 437 --FKSNAIVNTDGNPD 450 (787)
Q Consensus 437 --~~~~~~~~~~gn~~ 450 (787)
+..+..+.+.+|..
T Consensus 803 ~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 803 TTCPSLIQLQIGSNDI 818 (876)
T ss_dssp GGCSSCCEEECCSSCC
T ss_pred hcCCCCCEEECCCCCC
Confidence 55667778888765
No 4
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.7e-44 Score=379.68 Aligned_cols=292 Identities=25% Similarity=0.477 Sum_probs=215.7
Q ss_pred CCChhHHHHHHHHHHhcCCCCC-CCCC-CCCCCC--cccEEEcCC---CCEEEEEeCCCCccc--cCCCCCCCCCCCcEE
Q 003911 27 SGDDGDAAVMLALKKSLNPPES-LGWS-DTDPCK--WNHVVCIED---KRITRIQIGHQNLQG--TLPSNLQNLTKLERL 97 (787)
Q Consensus 27 ~~~~~d~~~l~~~k~~~~~~~~-~~w~-~~~~C~--w~gv~C~~~---~~v~~L~l~~~~l~~--~~~~~~~~l~~L~~L 97 (787)
.|.++|++||++||+++.+|.. .+|. ++|||. |.||+|+.. ++|+.|+|++++++| .+|+.|+++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 5889999999999999987753 3896 468998 999999864 799999999999999 899999999999999
Q ss_pred Eeec-CCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCce
Q 003911 98 ELQW-NSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSAN 175 (787)
Q Consensus 98 ~L~~-N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~ 175 (787)
+|++ |++.+.+| .|.++++|++|+|++|++++..|..|.++++|++|+|++|++++ .+|..+..+++|++|++++|+
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG-TLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEES-CCCGGGGGCTTCCEEECCSSC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCC-cCChHHhcCCCCCeEECcCCc
Confidence 9995 99988777 68889999999999999887777778888888888888877775 566677666666666666666
Q ss_pred ecccCCCCCCCCCCC-CCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEecccccccc
Q 003911 176 ITGQIPSFFGPDEFP-GLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSG 254 (787)
Q Consensus 176 l~~~~p~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 254 (787)
+++.+|..++ .++ +|++|+|++|++++.+|..+
T Consensus 161 l~~~~p~~l~--~l~~~L~~L~L~~N~l~~~~~~~~-------------------------------------------- 194 (313)
T 1ogq_A 161 ISGAIPDSYG--SFSKLFTSMTISRNRLTGKIPPTF-------------------------------------------- 194 (313)
T ss_dssp CEEECCGGGG--CCCTTCCEEECCSSEEEEECCGGG--------------------------------------------
T ss_pred ccCcCCHHHh--hhhhcCcEEECcCCeeeccCChHH--------------------------------------------
Confidence 6666666554 444 55666666666555555443
Q ss_pred CCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhh
Q 003911 255 PLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLN 334 (787)
Q Consensus 255 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~ 334 (787)
..++ |+.|+|++|++++.+|..|..+++|++|+|++|++++.+|.+.
T Consensus 195 -----~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~--------------------------- 241 (313)
T 1ogq_A 195 -----ANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG--------------------------- 241 (313)
T ss_dssp -----GGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCC---------------------------
T ss_pred -----hCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCccc---------------------------
Confidence 3333 6677777777776677777777777777777777765544311
Q ss_pred HHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccC
Q 003911 335 ALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGL 414 (787)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l 414 (787)
..++|+.|+|++|++++.+|..|..+++|+.|+|++|+++|.+|..
T Consensus 242 ---------------------------------~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~- 287 (313)
T 1ogq_A 242 ---------------------------------LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp ---------------------------------CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred ---------------------------------ccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-
Confidence 1125556666666666666667777777777777777777777765
Q ss_pred cCCCCCCeeeccCCc-ccc
Q 003911 415 SVLGALKELDVSNNQ-LYG 432 (787)
Q Consensus 415 ~~l~~L~~L~Ls~N~-l~g 432 (787)
..+++|+.|++++|+ ++|
T Consensus 288 ~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp TTGGGSCGGGTCSSSEEES
T ss_pred ccccccChHHhcCCCCccC
Confidence 667777777777665 444
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.3e-42 Score=360.98 Aligned_cols=186 Identities=23% Similarity=0.407 Sum_probs=160.3
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
++|++.+.||+|+||+||+|+.. +|+.||||++..........+++.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999875 79999999998766666677899999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
||+||+|.+++.. .....+++.+++.|+.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999954 223467899999999999999999998 8999999999999999999999999999987643
Q ss_pred CCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.. ......+||+.|||||++.+..|+ ++||||.
T Consensus 178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSl 211 (350)
T 4b9d_A 178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWAL 211 (350)
T ss_dssp HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHH
T ss_pred Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHH
Confidence 21 122346799999999999999999 9999983
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.6e-41 Score=351.19 Aligned_cols=185 Identities=28% Similarity=0.446 Sum_probs=164.9
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
++|++.+.||+|+||+||+|+.. +++.||||++.+... .....+.+.+|++++++++|||||++++++++.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999875 799999999986433 2345678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||++||+|.+++.. .+.+++.++..++.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+...
T Consensus 112 Ey~~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 99999999999954 2468999999999999999999998 899999999999999999999999999999875
Q ss_pred CCCC-ceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKG-SIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... ......+||+.|||||++.+..|+ ++||||.
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSl 220 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 220 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHH
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHH
Confidence 4332 233457899999999999999999 8999983
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.2e-40 Score=351.50 Aligned_cols=182 Identities=24% Similarity=0.420 Sum_probs=162.4
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.+.|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 356999999999999999999875 79999999997643 233456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
|||++|+|.+++.. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 151 Ey~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 221 (346)
T 4fih_A 151 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221 (346)
T ss_dssp CCCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecC
Confidence 99999999998853 368999999999999999999998 899999999999999999999999999999875
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... .....+||+.|||||++.+..|+ ++||||.
T Consensus 222 ~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSl 256 (346)
T 4fih_A 222 KEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSL 256 (346)
T ss_dssp SSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred CCCC-cccccccCcCcCCHHHHCCCCCCcHHHHHHH
Confidence 4432 33457899999999999999998 8999983
No 8
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.6e-40 Score=346.47 Aligned_cols=187 Identities=29% Similarity=0.543 Sum_probs=160.0
Q ss_pred CCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 593 NNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 56888999999999999999864 4788999999753 445668899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhhh--------hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcE
Q 003911 667 LLVFEYMPQGTLSRHIFNWA--------EEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 738 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 738 (787)
|||||||++|+|.++++... ......++|.+++.|+.||++||+|||+ ++||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcE
Confidence 99999999999999997532 1233579999999999999999999998 899999999999999999999
Q ss_pred EEeecccceecCCCCCce-eeeeccccCcccccccccCCcC-cceeec
Q 003911 739 KVADFGLVRLAPEGKGSI-ETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 739 kl~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
||+|||+|+......... .....||+.|||||++.++.|+ ++||||
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS 215 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 215 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHH
Confidence 999999998764433221 2235699999999999999999 999998
No 9
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=353.38 Aligned_cols=182 Identities=24% Similarity=0.420 Sum_probs=162.7
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.+.|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+..||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 357999999999999999999875 79999999997643 233467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
|||+||+|.+++.. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 228 Ey~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 228 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp ECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 99999999998843 358999999999999999999998 899999999999999999999999999999875
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... .....+||+.|||||++.+..|+ ++||||.
T Consensus 299 ~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSl 333 (423)
T 4fie_A 299 KEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSL 333 (423)
T ss_dssp SSCC-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHH
T ss_pred CCCc-cccccccCcCcCCHHHHCCCCCCcHHHHHHH
Confidence 5432 33457899999999999999999 8999983
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=386.43 Aligned_cols=391 Identities=18% Similarity=0.219 Sum_probs=271.6
Q ss_pred CCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCC-C-CCCCCCCCcEEEcccccCCcCCCcc
Q 003911 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPL-P-SLNGLASLEVVMLSNNQFTSVPSDF 134 (787)
Q Consensus 57 C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~-~~~~l~~L~~L~L~~N~l~~~~~~~ 134 (787)
|.|..|.+ -..+++.|||++|.+++..|..|.++++|++|+|++|.+.+.+ | .|.++++|++|+|++|+|++++|+.
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666665 4578999999999999888889999999999999999766544 4 6899999999999999999998888
Q ss_pred ccCCCCCcEEEccCCCCCCCCCChh--hhcCCCCCEEeccCceecccCC-CCCCCCCCCCCcEEeccccccccCCCcCcc
Q 003911 135 FTGLSSLQSIEIDNNPFSSWEIPQS--LRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQLIGGLPASFS 211 (787)
Q Consensus 135 ~~~l~~L~~L~L~~N~l~~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 211 (787)
|+++++|++|+|++|.+++ .+|.. +.++++|++|++++|.+++..+ ..|+ ++++|++|+|++|++++..|..+.
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~-~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~--~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSD-AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG--KLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp SCSCSSCCCEECTTCCCSS-CCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG--TCSSCCEEEEESSCCCCCCSGGGH
T ss_pred ccCCcccCEeeCcCCCCCc-ccccCccccccCCCCEEECCCCcccccccchhHh--hCCCCCEEECCCCcCCeeCHHHcc
Confidence 9999999999999999886 45544 8889999999999999887765 4565 788888888888888777665543
Q ss_pred c---cc------------------------------ccceeeccCCC---------------------------------
Q 003911 212 G---SQ------------------------------IQSLWVNGQNG--------------------------------- 225 (787)
Q Consensus 212 ~---~~------------------------------l~~L~~~~~~~--------------------------------- 225 (787)
. .+ ++.|++.++..
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~ 249 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF 249 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccc
Confidence 2 12 34444433310
Q ss_pred --------------------------CCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCccccc
Q 003911 226 --------------------------NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 278 (787)
Q Consensus 226 --------------------------~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~ 278 (787)
+......+..+..+++|+.|+|++|++++.++ .|.++++|++|+|++|++++.
T Consensus 250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 329 (844)
T 3j0a_A 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329 (844)
T ss_dssp SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCC
T ss_pred cccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCcc
Confidence 00111123345667777777777777777655 477777777777777777766
Q ss_pred CCccccCCCCCCEEEccCCcccccCCC-CCCceeeeccccCCCccCCCCCCCCchhhHH-------H-------------
Q 003911 279 VPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNAL-------L------------- 337 (787)
Q Consensus 279 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l-------~------------- 337 (787)
.|..|..+++|++|+|++|++++.++. +..+.+|+.+++++|.+..++.. +.+..+ .
T Consensus 330 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~--~~L~~L~l~~N~l~~l~~~~~~l~~L~ 407 (844)
T 3j0a_A 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFI--PSIPDIFLSGNKLVTLPKINLTANLIH 407 (844)
T ss_dssp CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSC--CSCSEEEEESCCCCCCCCCCTTCCEEE
T ss_pred CHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCC--CCcchhccCCCCcccccccccccceee
Confidence 677777777777777777777766664 55566777777777765543320 000000 0
Q ss_pred ----------HHHHHhCCChh----hhcccCC--------------------CCCC------CCccccccCCCceEEEEc
Q 003911 338 ----------SVVKLMGYPQR----FAENWKG--------------------NDPC------SDWIGVTCTKGNITVINF 377 (787)
Q Consensus 338 ----------~~~~~~~~~~~----~~~~~~~--------------------~~~~------~~~~~~~~~~~~L~~L~L 377 (787)
........+.. +..+... .... ......+..+++|+.|+|
T Consensus 408 ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~L 487 (844)
T 3j0a_A 408 LSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYL 487 (844)
T ss_dssp CCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCC
T ss_pred cccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEEC
Confidence 00000000000 0000000 0000 000112334578888999
Q ss_pred cCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC-CCCCceeecCCCCCCCCCC
Q 003911 378 QKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS-FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 378 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~-~~~~~~~~~~gn~~~~~~~ 455 (787)
++|++++..|..|..+++|+.|+|++|+|++..|..+. ++|++|||++|+|+|.+|. +..+..+.+.|||+.|..+
T Consensus 488 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp CHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSS
T ss_pred CCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccc
Confidence 99999988888889999999999999999876666665 7899999999999998886 6677889999999999654
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.3e-40 Score=335.02 Aligned_cols=182 Identities=28% Similarity=0.477 Sum_probs=146.4
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.... ....+++.+|++++++++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999865 7999999999865433 344568999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+ +|+|.+++.. ...+++.++..++.||+.||+|||+ ++|+||||||+|||+++++++||+|||+|+...
T Consensus 93 Ey~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred eCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 999 6899998854 2479999999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCceeeeeccccCcccccccccCCcC--cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS--SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~DiWS~ 785 (787)
... .....+||+.|||||++.+..|. ++||||.
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSl 198 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSC 198 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHH
T ss_pred CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHH
Confidence 432 23447899999999999998764 7999984
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9e-41 Score=347.33 Aligned_cols=184 Identities=24% Similarity=0.370 Sum_probs=155.2
Q ss_pred CCCcccceeccccceEEEEEEEe----CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
++|++.+.||+|+||+||+|+.. +++.||||++++.........++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47999999999999999999763 47899999998755544455678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||++||+|.+++.. ...+++.++..++.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 9999999999999954 2468999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
...... .....+||+.|||||++.+..|+ ++||||.
T Consensus 176 ~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSl 212 (304)
T 3ubd_A 176 SIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212 (304)
T ss_dssp -----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHH
T ss_pred ccCCCc-cccccccCcccCCHHHhccCCCCCCCcccch
Confidence 644332 23347899999999999999998 8999983
No 13
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.1e-40 Score=346.06 Aligned_cols=187 Identities=32% Similarity=0.572 Sum_probs=154.5
Q ss_pred CCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 593 NNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
++|.+.+.||+|+||+||+|+++ +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46788899999999999999864 4789999999753 455668899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhhhh----------cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC
Q 003911 667 LLVFEYMPQGTLSRHIFNWAE----------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 736 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 736 (787)
|||||||++|+|.++++.... ....+++|.+++.|+.||++||+|||+ ++||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCC
Confidence 999999999999999975321 123469999999999999999999998 8999999999999999999
Q ss_pred cEEEeecccceecCCCCC-ceeeeeccccCcccccccccCCcC-cceeec
Q 003911 737 RAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 737 ~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
.+||+|||+|+....... ......+||+.|||||++.+..|+ ++||||
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS 245 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 245 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccc
Confidence 999999999987644332 223446799999999999999999 999998
No 14
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=340.35 Aligned_cols=183 Identities=28% Similarity=0.504 Sum_probs=153.7
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
.+++++.+.||+|+||+||+|+++ ..||||+++....+....++|.+|++++++++|||||+++|++.+ +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 357888999999999999999865 369999998655566677899999999999999999999998864 56899999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
||++|+|.++++. ....+++.++..|+.|||.||+|||+ ++||||||||+|||+++++.+||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 112 WCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred cCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999999999854 23469999999999999999999998 8999999999999999999999999999987654
Q ss_pred CCC-ceeeeeccccCcccccccccC---CcC-cceeec
Q 003911 752 GKG-SIETRIAGTFGYLAPEYAVHT---RWS-SCSYWA 784 (787)
Q Consensus 752 ~~~-~~~~~~~gt~~y~aPE~~~~~---~~~-~~DiWS 784 (787)
... ......+||+.|||||++.+. .|+ ++||||
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS 222 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYS 222 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHH
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHh
Confidence 322 223456899999999999643 577 899998
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-38 Score=365.91 Aligned_cols=375 Identities=20% Similarity=0.203 Sum_probs=248.8
Q ss_pred CCCcccEEEcCC------------CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEc
Q 003911 56 PCKWNHVVCIED------------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVML 122 (787)
Q Consensus 56 ~C~w~gv~C~~~------------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L 122 (787)
.|.|.|| |+.. .+++.|+|++|++++..|..|+++++|++|+|++|+|++.+| .|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999998 8632 379999999999998889999999999999999999999887 7999999999999
Q ss_pred ccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCC-CCCCCCCCCCCcEEeccccc
Q 003911 123 SNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQ 201 (787)
Q Consensus 123 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~L~~N~ 201 (787)
++|+++++++..|+++++|++|+|++|+++...+|..+.++++|++|++++|.+.+.+| ..|. .+++|++|++++|+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~--~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFA--GLTSLNELEIKALS 159 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT--TCCEEEEEEEEETT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhh--cccccCeeeccCCc
Confidence 99999999999999999999999999999976678899999999999999998544444 5675 88999999999999
Q ss_pred cccCCCcCccc-------------------------ccccceeeccCCCCCcCCCCc-----------------------
Q 003911 202 LIGGLPASFSG-------------------------SQIQSLWVNGQNGNAKLGGGI----------------------- 233 (787)
Q Consensus 202 l~~~~p~~~~~-------------------------~~l~~L~~~~~~~~~~~~~~~----------------------- 233 (787)
+++.+|..+.. .+++.|++.++..........
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred ccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 99888877653 233334433322111000000
Q ss_pred --------------------------------------cc--------------------------cccCccCceEeccc
Q 003911 234 --------------------------------------DV--------------------------IQNMTSLKEIWLHS 249 (787)
Q Consensus 234 --------------------------------------~~--------------------------~~~l~~L~~L~L~~ 249 (787)
.. +...++|+.|++++
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence 00 00011222233333
Q ss_pred cccccCCCCC-CCCCCCCEEecCCCcccccCCc---cccCCCCCCEEEccCCcccccCC---CCCCceeeeccccCCCcc
Q 003911 250 NAFSGPLPDF-SGVKQLESLSLRDNFFTGPVPD---SLVKLESLKIVNMTNNLLQGPVP---EFDRSVSLDMAKGSNNFC 322 (787)
Q Consensus 250 N~l~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~---~l~~l~~L~~L~Ls~N~l~~~~p---~~~~~~~L~~l~~~~n~~ 322 (787)
|+++..+..+ ..+++|++|+|++|++++.+|. .+..+++|++|+|++|++++.++ .+..+.+|+.+++++|.+
T Consensus 320 n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 399 (549)
T 2z81_A 320 SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399 (549)
T ss_dssp SCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred CccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCC
Confidence 3322211111 2344555555555555544322 24444555555555555544321 133344444445555544
Q ss_pred CCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecc
Q 003911 323 LPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILA 402 (787)
Q Consensus 323 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 402 (787)
..+|..... .. .+..............+ +..++|+.|+|++|++++.+ ..+++|++|+|+
T Consensus 400 ~~lp~~~~~-~~-------------~L~~L~Ls~N~l~~l~~--~~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 400 HPMPDSCQW-PE-------------KMRFLNLSSTGIRVVKT--CIPQTLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp CCCCSCCCC-CT-------------TCCEEECTTSCCSCCCT--TSCTTCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred ccCChhhcc-cc-------------cccEEECCCCCcccccc--hhcCCceEEECCCCChhhhc----ccCChhcEEECC
Confidence 433321110 00 00000000000000000 01147899999999999753 578999999999
Q ss_pred cccccccCCccCcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCCCCCCCC
Q 003911 403 DNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 403 ~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~~~~~~~ 455 (787)
+|+|+ .+|. ...+++|++|||++|++++.+|. +..+..+.+.+|++.|..+
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99999 7887 57799999999999999998885 5567789999999988764
No 16
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.1e-38 Score=357.77 Aligned_cols=337 Identities=17% Similarity=0.218 Sum_probs=230.4
Q ss_pred CCCCccc--EEEcCC---------CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCC-C-CCCCCCCCcEEE
Q 003911 55 DPCKWNH--VVCIED---------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPL-P-SLNGLASLEVVM 121 (787)
Q Consensus 55 ~~C~w~g--v~C~~~---------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~-~~~~l~~L~~L~ 121 (787)
+.|.|.+ |.|+.. .+++.|+|++|++++..|..|+++++|++|+|++|.+.+.+ + .|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4566665 888643 47999999999999988999999999999999999998754 3 699999999999
Q ss_pred cccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChh--hhcCCCCCEEeccCceecccCCCC-CCCCCCCCCcEEecc
Q 003911 122 LSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQS--LRNASGLQNFSANSANITGQIPSF-FGPDEFPGLTILHLA 198 (787)
Q Consensus 122 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p~~-~~~~~l~~L~~L~L~ 198 (787)
|++|+++++++..|+++++|++|+|++|++++ .+|.. +..+++|++|++++|++++..|.. +. .+++|++|+|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--~l~~L~~L~L~ 162 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDG-AVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL--NMRRFHVLDLT 162 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBT-HHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG--GCTTCCEEECT
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCc-cccCcccccCcccCCEEECCCCccCccCcccccC--CCCcccEEeCC
Confidence 99999999999999999999999999999985 44444 999999999999999999998876 65 89999999999
Q ss_pred ccccccCCCcCcccc---cccceeeccCCCCCcCCCCc-----cccccCccCceEeccccccccCCCC-CC---C-----
Q 003911 199 FNQLIGGLPASFSGS---QIQSLWVNGQNGNAKLGGGI-----DVIQNMTSLKEIWLHSNAFSGPLPD-FS---G----- 261 (787)
Q Consensus 199 ~N~l~~~~p~~~~~~---~l~~L~~~~~~~~~~~~~~~-----~~~~~l~~L~~L~L~~N~l~~~~~~-~~---~----- 261 (787)
+|++++..|..+... .++.|++.++.......... ..+..+++|++|+|++|++++.++. +. .
T Consensus 163 ~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~ 242 (455)
T 3v47_A 163 FNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQ 242 (455)
T ss_dssp TCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEE
T ss_pred CCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcccccccee
Confidence 999999999888653 45555554433222211111 1234567889999999988764332 11 1
Q ss_pred -------------------------------CCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC-CCCc
Q 003911 262 -------------------------------VKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRS 309 (787)
Q Consensus 262 -------------------------------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~ 309 (787)
.++|+.|++++|++++.+|..+..+++|++|+|++|++++.+|. +..+
T Consensus 243 ~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 322 (455)
T 3v47_A 243 SLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGL 322 (455)
T ss_dssp EEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred eEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCc
Confidence 13555566666666555555555566666666666665555442 3334
Q ss_pred eeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchh
Q 003911 310 VSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPE 389 (787)
Q Consensus 310 ~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~ 389 (787)
. +|+.|+|++|++++..|..
T Consensus 323 ~------------------------------------------------------------~L~~L~Ls~N~l~~~~~~~ 342 (455)
T 3v47_A 323 T------------------------------------------------------------HLLKLNLSQNFLGSIDSRM 342 (455)
T ss_dssp T------------------------------------------------------------TCCEEECCSSCCCEECGGG
T ss_pred c------------------------------------------------------------cCCEEECCCCccCCcChhH
Confidence 4 4555555555555444555
Q ss_pred hcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCCCCCCC
Q 003911 390 FASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKE 454 (787)
Q Consensus 390 ~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~~~~~~ 454 (787)
|+.+++|++|+|++|++++..|..|..+++|++|+|++|++++.++. +..+..+.+.+|++.|..
T Consensus 343 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 343 FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp GTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred hcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 55555555555555555544455555555555555555555543332 233444555555554443
No 17
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.4e-40 Score=343.02 Aligned_cols=188 Identities=25% Similarity=0.435 Sum_probs=160.0
Q ss_pred CCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 593 NNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
.++++.+.||+|+||+||+|++. +++.||||+++.. ......++|.+|+.++++++|||||+++|+|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC--CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc-cChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 34677889999999999999863 5688999999753 3445567899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC
Q 003911 667 LLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 735 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 735 (787)
+||||||++|+|.+++...... ....++|.++++|+.|||+||+|||+ ++||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCC
Confidence 9999999999999999653211 12468999999999999999999998 899999999999999999
Q ss_pred CcEEEeecccceecCCCCC-ceeeeeccccCcccccccccCCcC-cceeec
Q 003911 736 MRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 736 ~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
+.+||+|||+|+....... ......+||++|||||++.++.|+ ++||||
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwS 232 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS 232 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHH
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhh
Confidence 9999999999987643322 223346799999999999999999 999998
No 18
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.5e-39 Score=339.87 Aligned_cols=187 Identities=29% Similarity=0.436 Sum_probs=149.5
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC-------
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN------- 664 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 664 (787)
++|++.+.||+|+||+||+|+.. +|+.||||+++... .....+++.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 46999999999999999999875 79999999997643 3445678999999999999999999999987544
Q ss_pred -----eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEE
Q 003911 665 -----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 739 (787)
Q Consensus 665 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 739 (787)
..|+|||||++|+|.+++.... .....++..++.|+.||+.||+|||+ ++||||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEE
Confidence 3689999999999999996421 12345667788999999999999998 8999999999999999999999
Q ss_pred EeecccceecCCCCCc-----------eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 740 VADFGLVRLAPEGKGS-----------IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 740 l~DFG~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+|||+|+........ ..+..+||+.|||||++.+..|+ ++||||.
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSl 216 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSL 216 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHH
Confidence 9999999876543211 12345799999999999999998 8999983
No 19
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-39 Score=334.38 Aligned_cols=179 Identities=26% Similarity=0.408 Sum_probs=154.9
Q ss_pred CcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe----CCeeEEE
Q 003911 595 FSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEKLLV 669 (787)
Q Consensus 595 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 669 (787)
|++.+.||+|+||+||+|.+. +++.||+|++..........++|.+|++++++++|||||++++++.+ .+..|||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 366788999999999999875 68999999998766666677889999999999999999999999875 3457999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCEEEC-CCCcEEEeecccc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFGLV 746 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DFG~a 746 (787)
||||++|+|.+++.. ...+++..+..|+.||+.||+|||+ ++ ||||||||+|||++ +++.+||+|||+|
T Consensus 108 mEy~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla 179 (290)
T 3fpq_A 108 TELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCC
Confidence 999999999999954 2468999999999999999999997 55 99999999999998 4789999999999
Q ss_pred eecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+..... .....+||+.|||||++.+ +|+ ++||||.
T Consensus 180 ~~~~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSl 215 (290)
T 3fpq_A 180 TLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAF 215 (290)
T ss_dssp GGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHH
T ss_pred EeCCCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHH
Confidence 865332 2345789999999999876 477 9999983
No 20
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.6e-39 Score=341.92 Aligned_cols=178 Identities=26% Similarity=0.376 Sum_probs=153.8
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
+.|++.++||+|+||+||+|+.. +|+.||||+++.+.. ..+|++++++++|||||++++++.+++..|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46888899999999999999875 799999999976432 2469999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC-cEEEeecccceecC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVRLAP 750 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~ 750 (787)
||+||+|.+++... +.+++.++..|+.||+.||+|||+ ++||||||||+|||++.++ ++||+|||+|+...
T Consensus 131 y~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred ccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999999542 468999999999999999999997 8999999999999999887 69999999999875
Q ss_pred CCCCc----eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGS----IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... .....+||+.|||||++.+..|+ ++||||.
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSl 242 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 242 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHH
Confidence 43211 11235799999999999999998 8999984
No 21
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.9e-37 Score=360.65 Aligned_cols=372 Identities=20% Similarity=0.170 Sum_probs=266.0
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.|+|++|++++..+..|.++++|++|+|++|+|++.+| .|.++++|++|+|++|++++++|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 468888888888887777788888888888888888888766 6888888888888888888888888888888888888
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecc-cCCCCCCCCCCCCCcEEeccccccccCCCcCccc-------------
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITG-QIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG------------- 212 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------------- 212 (787)
++|++.. ..|..++++++|++|++++|.+++ .+|..|+ .+++|++|+|++|++++..|..+..
T Consensus 112 ~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 112 VETKLAS-LESFPIGQLITLKKLNVAHNFIHSCKLPAYFS--NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp TTSCCCC-SSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG--TCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred cCCcccc-ccccccCCCCCCCEEeCCCCcccceechHhHh--hcCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 8888875 334667788888888888888775 4577775 7778888888777777666554432
Q ss_pred ---------------ccccceeeccCCCC---------------------------------------------------
Q 003911 213 ---------------SQIQSLWVNGQNGN--------------------------------------------------- 226 (787)
Q Consensus 213 ---------------~~l~~L~~~~~~~~--------------------------------------------------- 226 (787)
.+++.|++.++...
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred cCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 12333333222100
Q ss_pred ---C---------------------------------------------cCCCC--------------------cccccc
Q 003911 227 ---A---------------------------------------------KLGGG--------------------IDVIQN 238 (787)
Q Consensus 227 ---~---------------------------------------------~~~~~--------------------~~~~~~ 238 (787)
+ .++.. ...+..
T Consensus 269 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~ 348 (606)
T 3vq2_A 269 TYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVA 348 (606)
T ss_dssp CCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCC
T ss_pred cccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhcc
Confidence 0 00000 012345
Q ss_pred CccCceEeccccccccC---CCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCC--CCCCceeee
Q 003911 239 MTSLKEIWLHSNAFSGP---LPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP--EFDRSVSLD 313 (787)
Q Consensus 239 l~~L~~L~L~~N~l~~~---~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~~~L~ 313 (787)
+++|++|+|++|++++. +..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++.+| .+..+.+|+
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 427 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLL 427 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCC
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCC
Confidence 66777777777777765 234677888888889888888 467888888888888888888888776 467778888
Q ss_pred ccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCC--ccccccCCCceEEEEccCCcccccCchhhc
Q 003911 314 MAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD--WIGVTCTKGNITVINFQKMNLTGTISPEFA 391 (787)
Q Consensus 314 ~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~ 391 (787)
.+++++|.+.............+. ..........+ ....+...++|+.|+|++|++++.+|..|+
T Consensus 428 ~L~l~~n~l~~~~~~~~~~l~~L~-------------~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 494 (606)
T 3vq2_A 428 YLDISYTNTKIDFDGIFLGLTSLN-------------TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494 (606)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCC-------------EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred EEECcCCCCCccchhhhcCCCCCC-------------EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhc
Confidence 888888876654332211111000 00000000000 122344567999999999999999999999
Q ss_pred CCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC---CC-CCceeecCCCCCCCCCCC
Q 003911 392 SFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS---FK-SNAIVNTDGNPDIGKEKS 456 (787)
Q Consensus 392 ~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~---~~-~~~~~~~~gn~~~~~~~~ 456 (787)
.+++|+.|+|++|++++.+|..+..+++|++|||++|+++...+. +. .+..+.+.|||+.|..+.
T Consensus 495 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 495 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999999999998999999999999999999999953333 33 467889999999987764
No 22
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3e-38 Score=331.82 Aligned_cols=183 Identities=25% Similarity=0.368 Sum_probs=148.7
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC----eeE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----EKL 667 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~ 667 (787)
.++|.+.+.||+|+||+||+|++ +|+.||||+++... .....++.|+..+.+++|||||++++++.+++ ..|
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 35688899999999999999987 58999999986532 22233455666677889999999999998654 579
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEcCCCCCCEEECCCCcEEEee
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL-----AHQSFIHRDLKPSNILLGDDMRAKVAD 742 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~D 742 (787)
||||||++|+|.++++. ..++|+.+.+++.|++.||+|||+. ++++||||||||+|||+++++++||+|
T Consensus 78 lV~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 99999999999999954 3689999999999999999999973 124999999999999999999999999
Q ss_pred cccceecCCCCCce---eeeeccccCcccccccccC------CcC-cceeec
Q 003911 743 FGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAVHT------RWS-SCSYWA 784 (787)
Q Consensus 743 FG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~-~~DiWS 784 (787)
||+|+......... ....+||+.|||||++.+. .++ ++||||
T Consensus 152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS 203 (303)
T 3hmm_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA 203 (303)
T ss_dssp CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHH
T ss_pred CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhh
Confidence 99998775543322 2346799999999999765 355 899998
No 23
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-36 Score=351.94 Aligned_cols=374 Identities=18% Similarity=0.135 Sum_probs=234.5
Q ss_pred cccEEEcCC----------CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccC
Q 003911 59 WNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQF 127 (787)
Q Consensus 59 w~gv~C~~~----------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l 127 (787)
+..|.|... ..++.|+|++|++++..|..|+++++|++|+|++|+|++..| .|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 455778532 479999999999998889999999999999999999999877 699999999999999999
Q ss_pred CcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCC
Q 003911 128 TSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (787)
Q Consensus 128 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p 207 (787)
+++++..|+++++|++|+|++|+++. ..|..+.++++|++|++++|.+++..++.+. .+++|++|+|++|++++..|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISS-IDFIPLHNQKTLESLYLGSNHISSIKLPKGF--PTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSC-GGGSCCTTCTTCCEEECCSSCCCCCCCCTTC--CCTTCCEEECCSSCCCEECH
T ss_pred cccChhhhcccccccEeeccccCccc-CCcchhccCCcccEEECCCCcccccCccccc--CCcccCEEEcccCcccccCh
Confidence 99999999999999999999999995 3367789999999999999999985544443 58888999998888887766
Q ss_pred cCccc-cccc--ceeeccCCCCCcCCC----------------------------------------------Ccccccc
Q 003911 208 ASFSG-SQIQ--SLWVNGQNGNAKLGG----------------------------------------------GIDVIQN 238 (787)
Q Consensus 208 ~~~~~-~~l~--~L~~~~~~~~~~~~~----------------------------------------------~~~~~~~ 238 (787)
..+.. .+++ .|++.++........ ....+..
T Consensus 171 ~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp HHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhch
Confidence 66554 3344 444443322111100 0011111
Q ss_pred Cc--cCceEeccccccccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCC-CCCCceeeec
Q 003911 239 MT--SLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP-EFDRSVSLDM 314 (787)
Q Consensus 239 l~--~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~L~~ 314 (787)
+. +|+.|++++|.+++.++. |..+++|++|+|++|+++ .+|..+..+++|++|++++|++++.+| .+..+.+|+.
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 11 566666666666665554 666666666666666666 566666666666666666666666544 3445556666
Q ss_pred cccCCCccC-CCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCc---cccccCCCceEEEEccCCcccccCchhh
Q 003911 315 AKGSNNFCL-PSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW---IGVTCTKGNITVINFQKMNLTGTISPEF 390 (787)
Q Consensus 315 l~~~~n~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~L~Ls~N~l~g~~p~~~ 390 (787)
+++++|.+. .++.........+ ............. ...+...++|+.|++++|++.+..|..|
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L-------------~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 396 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENL-------------RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAF 396 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTC-------------CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTT
T ss_pred EECCCCCcccccchhhhhccCcC-------------CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHh
Confidence 666665443 1211110000000 0000000000000 0112233455555555555555555555
Q ss_pred cCCCCCCEEecccccccccCCcc-CcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCC
Q 003911 391 ASFKSLQRLILADNNLSGMIPEG-LSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNP 449 (787)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~g~ip~~-l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~ 449 (787)
..+++|+.|+|++|++++..|.. +..+++|++|++++|++++.+|. +..+..+.+.+|+
T Consensus 397 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 460 (606)
T 3t6q_A 397 KECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNH 460 (606)
T ss_dssp TTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCB
T ss_pred cCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCC
Confidence 55555555555555555444433 55555555555555555554443 2334445555543
No 24
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1e-37 Score=332.59 Aligned_cols=194 Identities=26% Similarity=0.421 Sum_probs=163.8
Q ss_pred HHHhhcCCCcccceeccccceEEEEEEEeC------CcEEEEEEeecccccchhHHHHHHHHHHHHhcCC-CccceEEeE
Q 003911 587 VLRNVTNNFSEENILGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH-RHLVALLGH 659 (787)
Q Consensus 587 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~ 659 (787)
..+...++|++.+.||+|+||+||+|++.. ++.||||+++... .....++|.+|++++++++| ||||+++|+
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 344456789999999999999999998652 3679999997633 34456789999999999965 899999999
Q ss_pred EEeC-CeeEEEEEecCCCCHHHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCC
Q 003911 660 CLDG-NEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKP 727 (787)
Q Consensus 660 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 727 (787)
|... +..++|||||++|+|.++++..... ....+++.++..|+.|||+||+|||+ ++||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCc
Confidence 9764 5689999999999999999764321 12458999999999999999999998 8999999999
Q ss_pred CCEEECCCCcEEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeec
Q 003911 728 SNILLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 728 ~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
+|||+++++.+||+|||+|+........ ......||+.|||||++.++.|+ ++||||
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS 272 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 272 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEee
Confidence 9999999999999999999977554332 23346799999999999999999 999998
No 25
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.6e-37 Score=343.94 Aligned_cols=311 Identities=18% Similarity=0.209 Sum_probs=180.5
Q ss_pred cccEEEcCC----------CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccC
Q 003911 59 WNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQF 127 (787)
Q Consensus 59 w~gv~C~~~----------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l 127 (787)
|..|.|... .+++.|+|++|++++..+..|.++++|++|+|++|.|++..| .|.++++|++|+|++|++
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 567777532 246666666666666666666666666666666666666554 566666666666666666
Q ss_pred CcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCC
Q 003911 128 TSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (787)
Q Consensus 128 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p 207 (787)
+.+++..|.++++|++|+|++|++.. ..|..|..+++|++|++++|.+++..+..|. .+++|++|+|++|++++..+
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVI-LLDYMFQDLYNLKSLEVGDNDLVYISHRAFS--GLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEEECCTTCCEECTTSST--TCTTCCEEEEESCCCSSCCH
T ss_pred CccCcccccCCCCCCEEECCCCcccc-CChhHccccccCCEEECCCCccceeChhhcc--CCCCCCEEECCCCcCcccCh
Confidence 66666666666666666666666664 4455666666666666666666666666664 66666666666666664433
Q ss_pred cCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCcccccCCccccCC
Q 003911 208 ASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKL 286 (787)
Q Consensus 208 ~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 286 (787)
..| .++++|+.|+|++|.+++.++ .|..+++|+.|++++|.+.+.+|..+...
T Consensus 170 ~~l--------------------------~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 223 (477)
T 2id5_A 170 EAL--------------------------SHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG 223 (477)
T ss_dssp HHH--------------------------TTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTT
T ss_pred hHh--------------------------cccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccC
Confidence 333 355555666666665555444 35555556666666555555555555555
Q ss_pred CCCCEEEccCCcccccCC-CCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCcccc
Q 003911 287 ESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGV 365 (787)
Q Consensus 287 ~~L~~L~Ls~N~l~~~~p-~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (787)
.+|++|+|++|++++.++ .+..+.+|+.+++++|.+..++.. .
T Consensus 224 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~------------------------------------~ 267 (477)
T 2id5_A 224 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS------------------------------------M 267 (477)
T ss_dssp CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTT------------------------------------S
T ss_pred ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChh------------------------------------h
Confidence 556666666655554332 133333344444444433222110 0
Q ss_pred ccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccC
Q 003911 366 TCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKI 434 (787)
Q Consensus 366 ~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 434 (787)
+...++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..
T Consensus 268 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 268 LHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred ccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 112235566666666666666666666666666666666666544445566666666666666665543
No 26
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=348.46 Aligned_cols=371 Identities=18% Similarity=0.193 Sum_probs=219.2
Q ss_pred CEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
+++.|++++|++++..+.+|.++++|++|+|++|+|++.++ .|.++++|++|+|++|+++++++..|+++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 46666666666665555566666666666666666666554 45666666666666666666666556666666666666
Q ss_pred CCCCCCCCCC-hhhhcCCCCCEEeccCceecc-cCCCCCCCCCCCCCcEEeccccccccCC-------------------
Q 003911 148 NNPFSSWEIP-QSLRNASGLQNFSANSANITG-QIPSFFGPDEFPGLTILHLAFNQLIGGL------------------- 206 (787)
Q Consensus 148 ~N~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~L~~N~l~~~~------------------- 206 (787)
+|+++. +| ..++++++|++|++++|.+++ .+|..|+ .+++|++|++++|++++..
T Consensus 109 ~n~l~~--l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 109 ETNLAS--LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp TSCCCC--STTCSCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred cccccc--CCCccccccccccEEecCCCccceecChhhhc--ccCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 665553 22 245555555566665555554 2455554 5555555555555555443
Q ss_pred ---------CcCcccccccceeeccCCCC---------------------------------------------------
Q 003911 207 ---------PASFSGSQIQSLWVNGQNGN--------------------------------------------------- 226 (787)
Q Consensus 207 ---------p~~~~~~~l~~L~~~~~~~~--------------------------------------------------- 226 (787)
|..+....++.|++.++...
T Consensus 185 ~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 185 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 43333333444433322000
Q ss_pred ----CcCCCCccccccCccCceEeccccccccCCCCC------------------------------------------C
Q 003911 227 ----AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDF------------------------------------------S 260 (787)
Q Consensus 227 ----~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~------------------------------------------~ 260 (787)
......++.+..+++|+.|++++|.+++.++.+ .
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 344 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccc
Confidence 111122334555566666666666665433322 3
Q ss_pred CCCCCCEEecCCCcccccC--CccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCC-CCCchhhHHH
Q 003911 261 GVKQLESLSLRDNFFTGPV--PDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPG-ACDPRLNALL 337 (787)
Q Consensus 261 ~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~-~~~~~~~~l~ 337 (787)
.+++|++|++++|++++.. |..+..+++|++|++++|.+++.++.+..+.+|+.+++++|.+...+. ........+.
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 4566666666666666443 566667777777777777777666656666667777777766554322 1111100000
Q ss_pred HHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCccc-ccCchhhcCCCCCCEEecccccccccCCccCcC
Q 003911 338 SVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLT-GTISPEFASFKSLQRLILADNNLSGMIPEGLSV 416 (787)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 416 (787)
......+.........+...++|+.|++++|+++ +.+|..|..+++|+.|+|++|++++..|..+..
T Consensus 425 ------------~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 492 (570)
T 2z63_A 425 ------------YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 492 (570)
T ss_dssp ------------EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred ------------EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhc
Confidence 0000000000111223445578888888888887 578888888888888888888888888888888
Q ss_pred CCCCCeeeccCCcccccCCC----CCCCceeecCCCCCCCCCC
Q 003911 417 LGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 417 l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~~~~~~~ 455 (787)
+++|++|+|++|++++.+|. +..+..+.+.+|++.|..+
T Consensus 493 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 493 LSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 88888888888888887764 4556778888888877654
No 27
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.5e-36 Score=346.78 Aligned_cols=147 Identities=21% Similarity=0.325 Sum_probs=133.2
Q ss_pred EEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCC
Q 003911 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP 150 (787)
Q Consensus 72 ~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 150 (787)
.++.++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+++++++.+|.++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 5788888898 7888776 899999999999999888 79999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEecccccccc-CCCcCccc-ccccceeeccCC
Q 003911 151 FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIG-GLPASFSG-SQIQSLWVNGQN 224 (787)
Q Consensus 151 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~-~~l~~L~~~~~~ 224 (787)
++. ..|..|.++++|++|++++|.+++..+..++ .+++|++|+|++|++++ .+|..|.+ .+|+.|++.++.
T Consensus 92 l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 92 IQS-FSPGSFSGLTSLENLVAVETKLASLESFPIG--QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp CCC-CCTTSSTTCTTCCEEECTTSCCCCSSSSCCT--TCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred ccc-cChhhcCCcccCCEEEccCCccccccccccC--CCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 996 5689999999999999999999998888886 99999999999999987 57888875 568888877654
No 28
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.5e-36 Score=359.74 Aligned_cols=323 Identities=27% Similarity=0.402 Sum_probs=268.8
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCC-CCcEEEeecCCCCCCCC-CCCC--CCCCcEEEcccccCCcCCCccccCCCCCcE
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLT-KLERLELQWNSISGPLP-SLNG--LASLEVVMLSNNQFTSVPSDFFTGLSSLQS 143 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 143 (787)
.+++.|++++|.++|.+|..+.+++ +|++|+|++|++++.+| .+.. +++|++|+|++|++++..|..|.++++|++
T Consensus 343 ~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 422 (768)
T 3rgz_A 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS 422 (768)
T ss_dssp TTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCE
T ss_pred CCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCE
Confidence 5788999999999999999888887 89999999999988555 5555 788999999999999888888999999999
Q ss_pred EEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeecc
Q 003911 144 IEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNG 222 (787)
Q Consensus 144 L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~ 222 (787)
|+|++|++++ .+|..+..+++|+.|++++|.+++.+|..+. .+++|++|+|++|++++.+|..+.. .+|+.|++.+
T Consensus 423 L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 499 (768)
T 3rgz_A 423 LHLSFNYLSG-TIPSSLGSLSKLRDLKLWLNMLEGEIPQELM--YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 499 (768)
T ss_dssp EECCSSEEES-CCCGGGGGCTTCCEEECCSSCCCSCCCGGGG--GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred EECcCCcccC-cccHHHhcCCCCCEEECCCCcccCcCCHHHc--CCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccC
Confidence 9999999887 7888899999999999999999988888886 8889999999999999888888864 4566666654
Q ss_pred CCCCCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCcccccCCcccc-----------------
Q 003911 223 QNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLV----------------- 284 (787)
Q Consensus 223 ~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~----------------- 284 (787)
|...+..|..++++++|++|+|++|++++.+| .+..+++|+.|+|++|+++|.+|..+.
T Consensus 500 ---N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~ 576 (768)
T 3rgz_A 500 ---NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576 (768)
T ss_dssp ---SCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEE
T ss_pred ---CccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccc
Confidence 44445667788889999999999999988776 488889999999999998888776543
Q ss_pred -----------------------------------------------------CCCCCCEEEccCCcccccCCC-CCCce
Q 003911 285 -----------------------------------------------------KLESLKIVNMTNNLLQGPVPE-FDRSV 310 (787)
Q Consensus 285 -----------------------------------------------------~l~~L~~L~Ls~N~l~~~~p~-~~~~~ 310 (787)
.+++|++|||++|+++|.+|. +..+.
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~ 656 (768)
T 3rgz_A 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 656 (768)
T ss_dssp EEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCT
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccc
Confidence 357799999999999998885 77888
Q ss_pred eeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhh
Q 003911 311 SLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEF 390 (787)
Q Consensus 311 ~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~ 390 (787)
.|+.+++++|.+....+ ..+..+.+|+.|||++|+++|.+|..+
T Consensus 657 ~L~~L~Ls~N~l~g~ip------------------------------------~~l~~L~~L~~LdLs~N~l~g~ip~~l 700 (768)
T 3rgz_A 657 YLFILNLGHNDISGSIP------------------------------------DEVGDLRGLNILDLSSNKLDGRIPQAM 700 (768)
T ss_dssp TCCEEECCSSCCCSCCC------------------------------------GGGGGCTTCCEEECCSSCCEECCCGGG
T ss_pred cCCEEeCcCCccCCCCC------------------------------------hHHhCCCCCCEEECCCCcccCcCChHH
Confidence 89999999998763221 123345689999999999999999999
Q ss_pred cCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCc-cccc
Q 003911 391 ASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQ-LYGK 433 (787)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~-l~g~ 433 (787)
+.+++|++|||++|+|+|.||.. +.+..+....+.+|+ |.|.
T Consensus 701 ~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 701 SALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred hCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 99999999999999999999965 456667777788885 6764
No 29
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.9e-35 Score=338.70 Aligned_cols=341 Identities=18% Similarity=0.169 Sum_probs=259.1
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.|+|++|++++..|..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+.++.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEEC
Confidence 579999999999998777899999999999999999999877 699999999999999999998876 8999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCC--cEEecccccc--ccCCCcCcccccccceee--
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGL--TILHLAFNQL--IGGLPASFSGSQIQSLWV-- 220 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~~~l~~L~~-- 220 (787)
++|+++.+.+|..|.++++|++|++++|++++. .+. .+++| ++|+|++|++ ++..|..+.....+.+.+
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~--~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l 203 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLL--PVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVF 203 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTG--GGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEE
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chh--hhhhceeeEEEeecccccccccCcccccccCcceEEEEe
Confidence 999999766778999999999999999999863 232 55566 9999999999 888887776532111111
Q ss_pred ----------------------ccCCCCC----cCCCCccccc---------------------------cCccCceEec
Q 003911 221 ----------------------NGQNGNA----KLGGGIDVIQ---------------------------NMTSLKEIWL 247 (787)
Q Consensus 221 ----------------------~~~~~~~----~~~~~~~~~~---------------------------~l~~L~~L~L 247 (787)
.+...+. .+.+.+..+. ..++|++|++
T Consensus 204 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l 283 (562)
T 3a79_B 204 HPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283 (562)
T ss_dssp CSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEE
Confidence 1111110 0000000000 1125666666
Q ss_pred cccccccCCCC-C-----------------------------------------------------CCCCCCCEEecCCC
Q 003911 248 HSNAFSGPLPD-F-----------------------------------------------------SGVKQLESLSLRDN 273 (787)
Q Consensus 248 ~~N~l~~~~~~-~-----------------------------------------------------~~l~~L~~L~L~~N 273 (787)
++|.++|.+|. + ..+++|++|+|++|
T Consensus 284 ~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred eccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCC
Confidence 66666654432 2 56788888888888
Q ss_pred cccccCCccccCCCCCCEEEccCCcccccC--C-CCCCceeeeccccCCCccCC-CCCCCCchhhHHHHHHHHhCCChhh
Q 003911 274 FFTGPVPDSLVKLESLKIVNMTNNLLQGPV--P-EFDRSVSLDMAKGSNNFCLP-SPGACDPRLNALLSVVKLMGYPQRF 349 (787)
Q Consensus 274 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~--p-~~~~~~~L~~l~~~~n~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (787)
++++.+|..+..+++|++|+|++|++++.. | .+..+.+|+.+++++|.+.. +|..
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--------------------- 422 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDR--------------------- 422 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSC---------------------
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChh---------------------
Confidence 888878888888888888888888888643 2 46677788888888887654 3321
Q ss_pred hcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCc
Q 003911 350 AENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQ 429 (787)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 429 (787)
.+...++|+.|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+
T Consensus 423 ---------------~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 423 ---------------TCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp ---------------CCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSC
T ss_pred ---------------hhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCC
Confidence 122346899999999999988887665 78999999999999 899988899999999999999
Q ss_pred ccccCCC----CCCCceeecCCCCCCCCCC
Q 003911 430 LYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 430 l~g~iP~----~~~~~~~~~~gn~~~~~~~ 455 (787)
|++..+. +..+..+.+.+||+.|..+
T Consensus 485 l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 485 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 9954333 4456778999999988764
No 30
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=329.92 Aligned_cols=186 Identities=24% Similarity=0.423 Sum_probs=158.2
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe------C
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------G 663 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~ 663 (787)
+.++|++.+.||+|+||+||+|+.. +|+.||||+++.........+++.+|+++|++++|||||++++++.. .
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 3468999999999999999999875 79999999998755555666788999999999999999999998764 3
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
+..|||||||+ |+|.+++.. .+.+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+||
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DF 202 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDF 202 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCC
T ss_pred CEEEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeec
Confidence 57899999995 689888843 3579999999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCC---CceeeeeccccCcccccccccCC-cC-cceeecC
Q 003911 744 GLVRLAPEGK---GSIETRIAGTFGYLAPEYAVHTR-WS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~-~~-~~DiWS~ 785 (787)
|+|+...... .......+||+.|||||++.+.. |+ ++||||.
T Consensus 203 Gla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSl 249 (398)
T 4b99_A 203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 249 (398)
T ss_dssp TTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHH
T ss_pred ceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehh
Confidence 9998764321 12234578999999999998864 46 8999984
No 31
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.9e-36 Score=336.02 Aligned_cols=324 Identities=19% Similarity=0.203 Sum_probs=283.7
Q ss_pred cEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCC
Q 003911 61 HVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLS 139 (787)
Q Consensus 61 gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 139 (787)
+-.|.... +.++.++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+++++.+..|.+++
T Consensus 6 ~C~C~~~~--~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 80 (477)
T 2id5_A 6 RCECSAQD--RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLF 80 (477)
T ss_dssp TCEEETTT--TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CCeECCCC--CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCc
Confidence 33575433 46888999998 7888775 689999999999999877 799999999999999999999999999999
Q ss_pred CCcEEEccCCCCCCCCCC-hhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccce
Q 003911 140 SLQSIEIDNNPFSSWEIP-QSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSL 218 (787)
Q Consensus 140 ~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L 218 (787)
+|++|+|++|+++. +| ..|.++++|++|++++|.+++..|..|. .+++|++|+|++|++++..|..|.
T Consensus 81 ~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~------- 149 (477)
T 2id5_A 81 NLRTLGLRSNRLKL--IPLGVFTGLSNLTKLDISENKIVILLDYMFQ--DLYNLKSLEVGDNDLVYISHRAFS------- 149 (477)
T ss_dssp TCCEEECCSSCCCS--CCTTSSTTCTTCCEEECTTSCCCEECTTTTT--TCTTCCEEEECCTTCCEECTTSST-------
T ss_pred cCCEEECCCCcCCc--cCcccccCCCCCCEEECCCCccccCChhHcc--ccccCCEEECCCCccceeChhhcc-------
Confidence 99999999999994 55 5689999999999999999999999986 899999999999999987777654
Q ss_pred eeccCCCCCcCCCCccccccCccCceEeccccccccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCC
Q 003911 219 WVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNN 297 (787)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 297 (787)
++++|++|+|++|++++.++. +..+++|+.|+|++|++++..+..|..+++|++|++++|
T Consensus 150 -------------------~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 150 -------------------GLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210 (477)
T ss_dssp -------------------TCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC
T ss_pred -------------------CCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC
Confidence 799999999999999987764 889999999999999999888889999999999999999
Q ss_pred cccccCC-CCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEE
Q 003911 298 LLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVIN 376 (787)
Q Consensus 298 ~l~~~~p-~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ 376 (787)
++.+.+| ......+|+.+++++|.+..++.. .+...++|+.|+
T Consensus 211 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~------------------------------------~~~~l~~L~~L~ 254 (477)
T 2id5_A 211 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL------------------------------------AVRHLVYLRFLN 254 (477)
T ss_dssp TTCCEECTTTTTTCCCSEEEEESSCCCSCCHH------------------------------------HHTTCTTCCEEE
T ss_pred ccccccCcccccCccccEEECcCCcccccCHH------------------------------------HhcCccccCeeE
Confidence 8776554 466666889999999877654311 123346899999
Q ss_pred ccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCCCCC
Q 003911 377 FQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIG 452 (787)
Q Consensus 377 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~~~~ 452 (787)
|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+. +..+..+.+.+||+.|
T Consensus 255 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 255 LSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred CCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 999999999999999999999999999999999999999999999999999999986654 4567889999999998
Q ss_pred CCC
Q 003911 453 KEK 455 (787)
Q Consensus 453 ~~~ 455 (787)
..+
T Consensus 335 ~c~ 337 (477)
T 2id5_A 335 DCR 337 (477)
T ss_dssp SGG
T ss_pred ccc
Confidence 754
No 32
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.8e-36 Score=346.68 Aligned_cols=367 Identities=19% Similarity=0.204 Sum_probs=255.4
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCc--EEEcccccCCcCCCccccCC------
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLE--VVMLSNNQFTSVPSDFFTGL------ 138 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l------ 138 (787)
.+++.|++++|.+++...+.+..+++|++|+|++|++++..+ .|..+++|+ +|++++|+++++++..|...
T Consensus 129 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~ 208 (606)
T 3t6q_A 129 KTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLN 208 (606)
T ss_dssp TTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEE
T ss_pred CcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccc
Confidence 468888888888886444455558888888888888887766 577777777 78888888877776655431
Q ss_pred ---------------------------------------------CCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccC
Q 003911 139 ---------------------------------------------SSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (787)
Q Consensus 139 ---------------------------------------------~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (787)
.+|++|++++|.++. ..+..|..+++|++|++++
T Consensus 209 l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~ 287 (606)
T 3t6q_A 209 FGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN-ISSNTFHCFSGLQELDLTA 287 (606)
T ss_dssp CTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSS-CCTTTTTTCTTCSEEECTT
T ss_pred cCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCc-cCHHHhccccCCCEEeccC
Confidence 156677777777764 3345577777777777777
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeeccCCCCCcCCCC-ccccccCccCceEeccccc
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGNAKLGGG-IDVIQNMTSLKEIWLHSNA 251 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~~~~~~~~~~~-~~~~~~l~~L~~L~L~~N~ 251 (787)
|+++ .+|..+. .+++|++|++++|++++..|..+.. .+|+.|++.++. ..... +..+.++++|++|++++|.
T Consensus 288 n~l~-~lp~~l~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~~~~~l~~L~~L~l~~n~ 361 (606)
T 3t6q_A 288 THLS-ELPSGLV--GLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNT---KRLELGTGCLENLENLRELDLSHDD 361 (606)
T ss_dssp SCCS-CCCSSCC--SCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCS---SCCBCCSSTTTTCTTCCEEECCSSC
T ss_pred CccC-CCChhhc--ccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCC---cccccchhhhhccCcCCEEECCCCc
Confidence 7776 4555554 6777777777777777666666654 445555555432 22122 2346677777777777777
Q ss_pred cccCC---CCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC--CCCceeeeccccCCCccCCCC
Q 003911 252 FSGPL---PDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE--FDRSVSLDMAKGSNNFCLPSP 326 (787)
Q Consensus 252 l~~~~---~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~--~~~~~~L~~l~~~~n~~~~~~ 326 (787)
+++.. ..+..+++|++|++++|++++..|..|..+++|++|++++|++++..+. +..+.+|+.+++++|.+...+
T Consensus 362 l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 441 (606)
T 3t6q_A 362 IETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISS 441 (606)
T ss_dssp CCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTC
T ss_pred cccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcC
Confidence 77653 3467777777777777777777777777777777777777777765443 556667777777777665543
Q ss_pred CCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCC----ccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecc
Q 003911 327 GACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD----WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILA 402 (787)
Q Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 402 (787)
.........+ ............ ....+...++|+.|++++|++++..|..|+.+++|+.|+|+
T Consensus 442 ~~~~~~l~~L-------------~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 508 (606)
T 3t6q_A 442 EQLFDGLPAL-------------QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLS 508 (606)
T ss_dssp TTTTTTCTTC-------------CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred HHHHhCCCCC-------------CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECC
Confidence 3221111100 000000000000 01224456799999999999999999999999999999999
Q ss_pred cccccccCCccCcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCCCCCCCC
Q 003911 403 DNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 403 ~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~~~~~~~ 455 (787)
+|++++.+|..+..++.| +|||++|++++.+|. +..+..+.+.|||+.|..+
T Consensus 509 ~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 509 HNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp SSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 999999999999999999 999999999998876 4567889999999988664
No 33
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.3e-35 Score=343.78 Aligned_cols=372 Identities=19% Similarity=0.170 Sum_probs=264.8
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
..++.|||++|+|++..+.+|.++++|++|+|++|+|+++++ +|.+|++|++|+|++|+|+++++++|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 368999999999997777899999999999999999999888 6999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceeccc-CCCCCCCCCCCCCcEEeccccccccCCCcCcccc------------
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQ-IPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGS------------ 213 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~------------ 213 (787)
++|+++. ..+..|+++++|++|++++|.+++. +|..++ .+++|++|+|++|+|++..|..+...
T Consensus 132 s~N~l~~-l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~l 208 (635)
T 4g8a_A 132 VETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 208 (635)
T ss_dssp TTSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred CCCcCCC-CChhhhhcCcccCeeccccCccccCCCchhhc--cchhhhhhcccCccccccccccccchhhhhhhhhhhhc
Confidence 9999995 3345799999999999999999864 567775 89999999999999987766554320
Q ss_pred ----------------cccceeeccCC-----------------------------------------------------
Q 003911 214 ----------------QIQSLWVNGQN----------------------------------------------------- 224 (787)
Q Consensus 214 ----------------~l~~L~~~~~~----------------------------------------------------- 224 (787)
.+..+.+.++.
T Consensus 209 s~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~ 288 (635)
T 4g8a_A 209 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 288 (635)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEE
T ss_pred ccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhh
Confidence 00011110000
Q ss_pred ---------------------------------------------------CCCcC----------------CCCccccc
Q 003911 225 ---------------------------------------------------GNAKL----------------GGGIDVIQ 237 (787)
Q Consensus 225 ---------------------------------------------------~~~~~----------------~~~~~~~~ 237 (787)
..... ...+....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~ 368 (635)
T 4g8a_A 289 AYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 368 (635)
T ss_dssp ECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCC
T ss_pred hhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccc
Confidence 00000 00001122
Q ss_pred cCccCceEeccccccccC--CC-CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCC--CCCCceee
Q 003911 238 NMTSLKEIWLHSNAFSGP--LP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP--EFDRSVSL 312 (787)
Q Consensus 238 ~l~~L~~L~L~~N~l~~~--~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~~~L 312 (787)
.+++|+.|++++|.+... .+ .+..+.+|+.|++..|.+. .++..+..+++|+.+++++|++....+ .+..+..+
T Consensus 369 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l 447 (635)
T 4g8a_A 369 DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 447 (635)
T ss_dssp BCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTC
T ss_pred cccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccccccccc
Confidence 467788888888887542 22 2344566666666666665 344455566666666666665554433 24444555
Q ss_pred eccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCC-CccccccCCCceEEEEccCCcccccCchhhc
Q 003911 313 DMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS-DWIGVTCTKGNITVINFQKMNLTGTISPEFA 391 (787)
Q Consensus 313 ~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~ 391 (787)
..++++.|.+...+.........+.. ....++.... .....+...++|+.|+|++|++++.+|..|.
T Consensus 448 ~~l~ls~n~l~~~~~~~~~~~~~L~~------------L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~ 515 (635)
T 4g8a_A 448 IYLDISHTHTRVAFNGIFNGLSSLEV------------LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 515 (635)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCE------------EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred ccccccccccccccccccccchhhhh------------hhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHc
Confidence 55555555544333221111000000 0000000000 0112344567999999999999999999999
Q ss_pred CCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC----C-CCCceeecCCCCCCCCCC
Q 003911 392 SFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----F-KSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 392 ~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~----~-~~~~~~~~~gn~~~~~~~ 455 (787)
++++|++|+|++|+|++..|..|..+++|++|||++|+|++.+|. + .++..+.+.|||+.|.+.
T Consensus 516 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 516 SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999999999998899999999999999999999999886 2 456789999999999865
No 34
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.8e-35 Score=346.03 Aligned_cols=379 Identities=16% Similarity=0.155 Sum_probs=251.7
Q ss_pred CCcccEEEcC----------CCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccc
Q 003911 57 CKWNHVVCIE----------DKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNN 125 (787)
Q Consensus 57 C~w~gv~C~~----------~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N 125 (787)
|.+..|.|.. ..+++.|+|++|++++..+..|+++++|++|+|++|.+++.+| .|.++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4455567753 2479999999999998777789999999999999999999888 5899999999999999
Q ss_pred cCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccC
Q 003911 126 QFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGG 205 (787)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~ 205 (787)
+++++++..|+++++|++|+|++|++.. ..|..|.++++|++|++++|.+++.+|..++ .+++|++|+|++|++++.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQK-IKNNPFVKQKNLITLDLSHNGLSSTKLGTQV--QLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCC-CCSCTTTTCTTCCEEECCSSCCSCCCCCSSS--CCTTCCEEECCSSCCCCB
T ss_pred ccCccChhhhccCCCCCEEECCCCccCc-cChhHccccCCCCEEECCCCcccccCchhhc--ccccCCEEEccCCccccc
Confidence 9999999999999999999999999985 4457899999999999999999999998886 899999999999999988
Q ss_pred CCcCccc---ccccceeeccCCCCCcCCCCccccccC---------------------------ccCceEeccccccccC
Q 003911 206 LPASFSG---SQIQSLWVNGQNGNAKLGGGIDVIQNM---------------------------TSLKEIWLHSNAFSGP 255 (787)
Q Consensus 206 ~p~~~~~---~~l~~L~~~~~~~~~~~~~~~~~~~~l---------------------------~~L~~L~L~~N~l~~~ 255 (787)
.+..+.. .+|+.|++.++..... .+..+..+ ++|+.|++++|.+++.
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~~---~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~ 237 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKEF---SPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT 237 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCCB---CTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEE
T ss_pred CHHHhhccccccccEEECCCCccccc---ChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCccccc
Confidence 7766543 4567776665433222 22222221 4556666666666665
Q ss_pred CCC-CCCCCC--CCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC-CCCceeeeccccCCC-----------
Q 003911 256 LPD-FSGVKQ--LESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNN----------- 320 (787)
Q Consensus 256 ~~~-~~~l~~--L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~l~~~~n----------- 320 (787)
++. +.+++. |+.|+|++|++++..|..|..+++|++|+|++|++++.+|. +..+.+|+.+++++|
T Consensus 238 ~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~l 317 (680)
T 1ziw_A 238 SNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASL 317 (680)
T ss_dssp CTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------C
T ss_pred ChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccc
Confidence 543 544433 66666666666666666666666666666666666665543 444445555555444
Q ss_pred ----------------------ccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEcc
Q 003911 321 ----------------------FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQ 378 (787)
Q Consensus 321 ----------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls 378 (787)
.+...+.........+..+ .+..+...........-.......|+.|+++
T Consensus 318 p~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L--------~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~ 389 (680)
T 1ziw_A 318 PKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYL--------SLSNSFTSLRTLTNETFVSLAHSPLHILNLT 389 (680)
T ss_dssp CEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEE--------ECTTCBSCCCEECTTTTGGGTTSCCCEEECT
T ss_pred cccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEE--------ECCCCchhhhhcchhhhcccccCcCceEECC
Confidence 3333221111100000000 0000000000000000000112367777777
Q ss_pred CCcccccCchhhcCCCCCCEEecccccccccCC-ccCcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCC
Q 003911 379 KMNLTGTISPEFASFKSLQRLILADNNLSGMIP-EGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNP 449 (787)
Q Consensus 379 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip-~~l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~ 449 (787)
+|++++..|..|..+++|+.|+|++|++++.+| ..+..+++|++|++++|++++..|. ++.+..+.+.+|.
T Consensus 390 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~ 465 (680)
T 1ziw_A 390 KNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVA 465 (680)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSC
T ss_pred CCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccc
Confidence 777777777777777777777777777776665 5677777777777777777665443 3444555555554
No 35
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.8e-36 Score=321.99 Aligned_cols=183 Identities=22% Similarity=0.376 Sum_probs=155.3
Q ss_pred HHhhcCCCcccceeccccceEEEEEEEe----CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEe
Q 003911 588 LRNVTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 662 (787)
Q Consensus 588 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 662 (787)
+..+.++|++.+.||+|+||+||+|+.+ +++.||+|++... ....++.+|+++++.+ +||||+++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3456788999999999999999999764 4688999998653 2345788999999998 69999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC-CcEEEe
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVA 741 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~ 741 (787)
.+..|+||||+++|+|.+++ +.+++.++..++.|++.||+|||+ ++||||||||+|||++.+ +.+||+
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~--------~~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDIL--------NSLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHH--------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEEC
T ss_pred CCEEEEEEeCCCcccHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEEC
Confidence 99999999999999999988 248899999999999999999998 899999999999999876 799999
Q ss_pred ecccceecCCCCC---------------------------ceeeeeccccCcccccccccCC-cC-cceeecC
Q 003911 742 DFGLVRLAPEGKG---------------------------SIETRIAGTFGYLAPEYAVHTR-WS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~-~~-~~DiWS~ 785 (787)
|||+|+...+... ......+||+.|||||++.+.. |+ ++||||.
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSl 233 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSA 233 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhh
Confidence 9999986543221 1112357999999999998764 66 7899984
No 36
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=336.34 Aligned_cols=341 Identities=19% Similarity=0.171 Sum_probs=236.8
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.|+|++|++++..|..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+.+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH---PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC---CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc---ccCCccEEec
Confidence 589999999999998777889999999999999999999876 799999999999999999988776 8999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCC--cEEecccccc--ccCCCcCccccc--------
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGL--TILHLAFNQL--IGGLPASFSGSQ-------- 214 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~~~-------- 214 (787)
++|+++++.+|..|+++++|++|++++|.+++. .+. .+++| ++|+|++|++ .+..|..+....
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~---~~~--~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l 172 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS---SVL--PIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG---GGG--GGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEEC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchh---hcc--ccccceeeEEEeecccccccccccccccccccceEEEEe
Confidence 999998766889999999999999999999873 343 67777 9999999999 777787776522
Q ss_pred ----------------ccceeeccCCCCC------cCCCCcccccc---------------------------CccCceE
Q 003911 215 ----------------IQSLWVNGQNGNA------KLGGGIDVIQN---------------------------MTSLKEI 245 (787)
Q Consensus 215 ----------------l~~L~~~~~~~~~------~~~~~~~~~~~---------------------------l~~L~~L 245 (787)
+..|...+...+. ...+.+..++. +++|++|
T Consensus 173 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp CSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred ccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 1112111111110 00000001111 1245555
Q ss_pred eccccccccCCCC-C-----------------------------------------------------CCCCCCCEEecC
Q 003911 246 WLHSNAFSGPLPD-F-----------------------------------------------------SGVKQLESLSLR 271 (787)
Q Consensus 246 ~L~~N~l~~~~~~-~-----------------------------------------------------~~l~~L~~L~L~ 271 (787)
++++|+++|.+|. + ..+++|++|+|+
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls 332 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFS 332 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECC
T ss_pred EeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeE
Confidence 5555555543332 2 334455555555
Q ss_pred CCcccccCCccccCCCCCCEEEccCCcccc--cCC-CCCCceeeeccccCCCccCC-CCCCCCchhhHHHHHHHHhCCCh
Q 003911 272 DNFFTGPVPDSLVKLESLKIVNMTNNLLQG--PVP-EFDRSVSLDMAKGSNNFCLP-SPGACDPRLNALLSVVKLMGYPQ 347 (787)
Q Consensus 272 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p-~~~~~~~L~~l~~~~n~~~~-~~~~~~~~~~~l~~~~~~~~~~~ 347 (787)
+|++++.+|..+..+++|++|+|++|++++ .+| .+..+.+|+.+++++|.+.. +|.
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~-------------------- 392 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK-------------------- 392 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG--------------------
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc--------------------
Confidence 555554455555555555555555555553 111 23344444555555544332 210
Q ss_pred hhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccC
Q 003911 348 RFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSN 427 (787)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~ 427 (787)
+.+...++|+.|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++
T Consensus 393 ----------------~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~ 453 (520)
T 2z7x_B 393 ----------------GDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVAS 453 (520)
T ss_dssp ----------------CSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred ----------------chhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCC
Confidence 1123446899999999999988887765 78999999999999 8999888999999999999
Q ss_pred CcccccCCC----CCCCceeecCCCCCCCCCC
Q 003911 428 NQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 428 N~l~g~iP~----~~~~~~~~~~gn~~~~~~~ 455 (787)
|++++..+. +..+..+.+.+|++.|..+
T Consensus 454 N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 454 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999953332 4566788999999988654
No 37
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.7e-35 Score=342.73 Aligned_cols=339 Identities=19% Similarity=0.269 Sum_probs=289.7
Q ss_pred CCEEEEEeCCCCcccc-----------------CCCCCC--CCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEccccc-
Q 003911 68 KRITRIQIGHQNLQGT-----------------LPSNLQ--NLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ- 126 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~- 126 (787)
.+++.|+|++|.++|. +|+.++ ++++|++|+|++|++.+.+| .|.++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 6899999999999996 999999 99999999999999999887 79999999999999998
Q ss_pred CCc-CCCccccCC------CCCcEEEccCCCCCCCCCCh--hhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEec
Q 003911 127 FTS-VPSDFFTGL------SSLQSIEIDNNPFSSWEIPQ--SLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHL 197 (787)
Q Consensus 127 l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L 197 (787)
+++ ..|..++.+ ++|++|+|++|+++ .+|. .+.++++|++|++++|+++|.+| .++ .+++|++|+|
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~--~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~--~l~~L~~L~L 360 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK--TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG--SEIKLASLNL 360 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS--SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE--EEEEESEEEC
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC--ccCchhhhccCCCCCEEeCcCCcCccchh-hhC--CCCCCCEEEC
Confidence 998 555667766 99999999999999 7898 99999999999999999999999 775 8999999999
Q ss_pred cccccccCCCcCccc-cc-ccceeeccCCCCCcCCCCccccccCc--cCceEeccccccccCCCC-CC-------CCCCC
Q 003911 198 AFNQLIGGLPASFSG-SQ-IQSLWVNGQNGNAKLGGGIDVIQNMT--SLKEIWLHSNAFSGPLPD-FS-------GVKQL 265 (787)
Q Consensus 198 ~~N~l~~~~p~~~~~-~~-l~~L~~~~~~~~~~~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~-~~-------~l~~L 265 (787)
++|+++ .+|..+.. .+ |+.|++.++... ..|..+..++ +|+.|+|++|++++.+|. +. .+++|
T Consensus 361 ~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~----~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L 435 (636)
T 4eco_A 361 AYNQIT-EIPANFCGFTEQVENLSFAHNKLK----YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINV 435 (636)
T ss_dssp CSSEEE-ECCTTSEEECTTCCEEECCSSCCS----SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCE
T ss_pred CCCccc-cccHhhhhhcccCcEEEccCCcCc----ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCC
Confidence 999999 78888775 45 888888765433 4556666654 899999999999997764 66 77899
Q ss_pred CEEecCCCcccccCCcc-ccCCCCCCEEEccCCcccccCCCCCCce--------eeeccccCCCccCCCCCCCCchhhHH
Q 003911 266 ESLSLRDNFFTGPVPDS-LVKLESLKIVNMTNNLLQGPVPEFDRSV--------SLDMAKGSNNFCLPSPGACDPRLNAL 336 (787)
Q Consensus 266 ~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~~--------~L~~l~~~~n~~~~~~~~~~~~~~~l 336 (787)
++|+|++|+|+ .+|.. +..+++|++|+|++|+++..++.++... +|+.+++++|.+..+|....
T Consensus 436 ~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~------ 508 (636)
T 4eco_A 436 SSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFR------ 508 (636)
T ss_dssp EEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGGGS------
T ss_pred CEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCccChhhh------
Confidence 99999999999 55554 5669999999999999996555554433 78899999998775542110
Q ss_pred HHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEec------ccccccccC
Q 003911 337 LSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLIL------ADNNLSGMI 410 (787)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L------s~N~l~g~i 410 (787)
....++|+.|+|++|++++ +|..++.+++|+.|+| ++|++.+.+
T Consensus 509 -----------------------------~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~ 558 (636)
T 4eco_A 509 -----------------------------ATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREW 558 (636)
T ss_dssp -----------------------------TTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCC
T ss_pred -----------------------------hccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccC
Confidence 0134689999999999998 9999999999999999 568899999
Q ss_pred CccCcCCCCCCeeeccCCcccccCCC--CCCCceeecCCCCCCCCC
Q 003911 411 PEGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIGKE 454 (787)
Q Consensus 411 p~~l~~l~~L~~L~Ls~N~l~g~iP~--~~~~~~~~~~gn~~~~~~ 454 (787)
|..+..+++|++|+|++|++ +.||. +..+..+.+.+|+..|-.
T Consensus 559 p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 559 PEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred hHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 99999999999999999999 78886 567788999999988743
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.9e-35 Score=338.66 Aligned_cols=328 Identities=18% Similarity=0.172 Sum_probs=257.9
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.++++++.+....+..|.++++|++|+|++|.|++.+| .|.++++|++|+|++|.|+++++..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 357889999999986555568899999999999999999887 7999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCh-hhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCC
Q 003911 147 DNNPFSSWEIPQ-SLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNG 225 (787)
Q Consensus 147 ~~N~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~ 225 (787)
++|.++. +|. .|.++++|++|++++|.+++.+|..|+ .+++|++|+|++|++++..+..+ ..++.|++.++..
T Consensus 131 ~~n~l~~--l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l--~~L~~L~l~~n~l 204 (597)
T 3oja_B 131 ERNDLSS--LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ--ATTSLQNLQLSSNRLTHVDLSLI--PSLFHANVSYNLL 204 (597)
T ss_dssp CSSCCCC--CCTTTTTTCTTCCEEECCSSCCCBCCTTTTT--TCTTCCEEECTTSCCSBCCGGGC--TTCSEEECCSSCC
T ss_pred eCCCCCC--CCHHHhccCCCCCEEEeeCCcCCCCChhhhh--cCCcCcEEECcCCCCCCcChhhh--hhhhhhhcccCcc
Confidence 9999994 554 479999999999999999999999887 89999999999999997654444 4566666654322
Q ss_pred CCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC
Q 003911 226 NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 226 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 305 (787)
..+...++|+.|++++|.++..++.+. ++|+.|+|++|++++ +..+..+++|+.|+|++|.+++.+|.
T Consensus 205 --------~~l~~~~~L~~L~ls~n~l~~~~~~~~--~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~ 272 (597)
T 3oja_B 205 --------STLAIPIAVEELDASHNSINVVRGPVN--VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYH 272 (597)
T ss_dssp --------SEEECCTTCSEEECCSSCCCEEECSCC--SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESG
T ss_pred --------ccccCCchhheeeccCCcccccccccC--CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHH
Confidence 223456789999999999987766543 689999999999985 47789999999999999999988764
Q ss_pred -CCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccc
Q 003911 306 -FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG 384 (787)
Q Consensus 306 -~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g 384 (787)
+..+.+|+.+++++|.+..++.. ....++|+.|+|++|+++
T Consensus 273 ~~~~l~~L~~L~Ls~N~l~~l~~~-------------------------------------~~~l~~L~~L~Ls~N~l~- 314 (597)
T 3oja_B 273 PFVKMQRLERLYISNNRLVALNLY-------------------------------------GQPIPTLKVLDLSHNHLL- 314 (597)
T ss_dssp GGTTCSSCCEEECTTSCCCEEECS-------------------------------------SSCCTTCCEEECCSSCCC-
T ss_pred HhcCccCCCEEECCCCCCCCCCcc-------------------------------------cccCCCCcEEECCCCCCC-
Confidence 66677777777777765543211 112357788888888887
Q ss_pred cCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC--CCCCceeecCCCCCCCCC
Q 003911 385 TISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIGKE 454 (787)
Q Consensus 385 ~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~--~~~~~~~~~~gn~~~~~~ 454 (787)
.+|..++.+++|+.|+|++|+|++. | +..+++|+.|+|++|++++..+. +.......+.+++..|+.
T Consensus 315 ~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 315 HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 5677777788888888888888743 3 66677888888888888765332 333333445566666654
No 39
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.6e-34 Score=338.83 Aligned_cols=380 Identities=18% Similarity=0.184 Sum_probs=245.1
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCC--CcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEE
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTK--LERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSI 144 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 144 (787)
..++.|++++|.+++..|..|.+++. |++|+|++|++++.+| .|..+++|++|+|++|+++++++..|.++++|++|
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 45778888888888888888877754 8888888888888766 58888888888888888888888888888888888
Q ss_pred EccCCCCCC----CCCCh----hhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccC--CCcCccc--
Q 003911 145 EIDNNPFSS----WEIPQ----SLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGG--LPASFSG-- 212 (787)
Q Consensus 145 ~L~~N~l~~----~~~p~----~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~-- 212 (787)
+|++|.... ..+|. .|..+++|++|++++|++++..+..|. .+++|++|++++|.+++. .+..|..
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~ 379 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFT--GLINLKYLSLSNSFTSLRTLTNETFVSLA 379 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTT--TCTTCCEEECTTCBSCCCEECTTTTGGGT
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhc--cccCCcEEECCCCchhhhhcchhhhcccc
Confidence 888765442 02332 677788888888888888887777775 777777777777764322 1222221
Q ss_pred -ccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC--CCCCCCCCCEEecCCCcccccCCccccCCCCC
Q 003911 213 -SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLESLSLRDNFFTGPVPDSLVKLESL 289 (787)
Q Consensus 213 -~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 289 (787)
..++.|++.++ ......+..+..+++|+.|+|++|.+++.++ .+.++++|++|++++|++++..+..|..+++|
T Consensus 380 ~~~L~~L~L~~n---~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L 456 (680)
T 1ziw_A 380 HSPLHILNLTKN---KISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSL 456 (680)
T ss_dssp TSCCCEEECTTS---CCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTC
T ss_pred cCcCceEECCCC---CCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCccc
Confidence 23444444433 2223334455666666666666666665443 35566666666666666665555555555555
Q ss_pred CEEEccCCccc--ccCC-CCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccc
Q 003911 290 KIVNMTNNLLQ--GPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVT 366 (787)
Q Consensus 290 ~~L~Ls~N~l~--~~~p-~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (787)
+.|++++|.++ +.+| .+..+.+|+.+++++|.+..++.........+.. +.-....+...+....|- .....+
T Consensus 457 ~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~---L~Ls~N~l~~~~~~~~~~-~~~~~~ 532 (680)
T 1ziw_A 457 QRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEI---LDLQHNNLARLWKHANPG-GPIYFL 532 (680)
T ss_dssp CEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE---EECCSSCCGGGGSTTSTT-SCCCTT
T ss_pred ccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCE---EeCCCCCccccchhhccC-Ccchhh
Confidence 55555555554 2222 2444455555555555555444322111110000 000000000000000000 000123
Q ss_pred cCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC-----CCCCc
Q 003911 367 CTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS-----FKSNA 441 (787)
Q Consensus 367 ~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~-----~~~~~ 441 (787)
...++|+.|+|++|+++...+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++.+|. +..+.
T Consensus 533 ~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~ 612 (680)
T 1ziw_A 533 KGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLT 612 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCS
T ss_pred cCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccC
Confidence 4557999999999999955556799999999999999999976667789999999999999999998774 56788
Q ss_pred eeecCCCCCCCCCCC
Q 003911 442 IVNTDGNPDIGKEKS 456 (787)
Q Consensus 442 ~~~~~gn~~~~~~~~ 456 (787)
.+.+.|||+.|..+.
T Consensus 613 ~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 613 ELDMRFNPFDCTCES 627 (680)
T ss_dssp EEECTTCCCCBCCCC
T ss_pred EEEccCCCcccCCcc
Confidence 999999999998753
No 40
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-35 Score=335.77 Aligned_cols=183 Identities=26% Similarity=0.407 Sum_probs=156.0
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHH---HHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEF---KSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
.++|++.+.||+|+||+||+|+.. +|+.||||++.+.... ......+ +.++++++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999876 7999999999764332 1222233 3446667777999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccc
Q 003911 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 746 (787)
|+||||++||+|.+++.. ...+++..+..|+.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|
T Consensus 268 ylVmEy~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp EEEECCCCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEeccccee
Confidence 999999999999999954 2468999999999999999999997 89999999999999999999999999999
Q ss_pred eecCCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
+...... ....+||+.|||||++.+ ..|+ ++|+||.
T Consensus 340 ~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSL 377 (689)
T 3v5w_A 340 CDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377 (689)
T ss_dssp EECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHH
T ss_pred eecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHH
Confidence 9875443 234689999999999975 5677 8999983
No 41
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-34 Score=317.96 Aligned_cols=327 Identities=18% Similarity=0.173 Sum_probs=245.1
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.|+++++.++...+..|..+++|++|+|++|.|++.++ .|.++++|++|+|++|+++++++..|+++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 468889999999885444457899999999999999999877 7999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCChh-hhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCC
Q 003911 147 DNNPFSSWEIPQS-LRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNG 225 (787)
Q Consensus 147 ~~N~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~ 225 (787)
++|+++ .+|.. |.++++|++|++++|.+++..|..+. .+++|++|++++|++++.....+ .+++.|++.++..
T Consensus 125 ~~n~l~--~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~l--~~L~~L~l~~n~l 198 (390)
T 3o6n_A 125 ERNDLS--SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ--ATTSLQNLQLSSNRLTHVDLSLI--PSLFHANVSYNLL 198 (390)
T ss_dssp CSSCCC--CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS--SCTTCCEEECCSSCCSBCCGGGC--TTCSEEECCSSCC
T ss_pred CCCccC--cCCHHHhcCCCCCcEEECCCCccCccChhhcc--CCCCCCEEECCCCcCCccccccc--cccceeecccccc
Confidence 999999 56655 68999999999999999999888886 89999999999999997643333 4566666654321
Q ss_pred CCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC
Q 003911 226 NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 226 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 305 (787)
..+...++|++|++++|.++..+... .++|+.|+|++|++++. ..+..+++|++|+|++|.+++.+|.
T Consensus 199 --------~~~~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~ 266 (390)
T 3o6n_A 199 --------STLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH 266 (390)
T ss_dssp --------SEEECCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG
T ss_pred --------cccCCCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh
Confidence 22345568999999999988765543 47899999999999853 5788899999999999999887664
Q ss_pred -CCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccc
Q 003911 306 -FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG 384 (787)
Q Consensus 306 -~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g 384 (787)
+..+.+|+.+++++|.+..++.. ....++|+.|+|++|+++
T Consensus 267 ~~~~l~~L~~L~L~~n~l~~~~~~-------------------------------------~~~l~~L~~L~L~~n~l~- 308 (390)
T 3o6n_A 267 PFVKMQRLERLYISNNRLVALNLY-------------------------------------GQPIPTLKVLDLSHNHLL- 308 (390)
T ss_dssp GGTTCSSCCEEECCSSCCCEEECS-------------------------------------SSCCTTCCEEECCSSCCC-
T ss_pred HccccccCCEEECCCCcCcccCcc-------------------------------------cCCCCCCCEEECCCCcce-
Confidence 55666677777776655433211 112346777777777776
Q ss_pred cCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC--CCCCceeecCCCCCCCC
Q 003911 385 TISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIGK 453 (787)
Q Consensus 385 ~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~--~~~~~~~~~~gn~~~~~ 453 (787)
.+|..+..+++|+.|+|++|+++. +| +..+++|++|++++|++++.-.. +.......+.+++..|.
T Consensus 309 ~~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 309 HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCC
T ss_pred ecCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceec
Confidence 456666777777777777777763 33 56667777777777777653221 22223333445554444
No 42
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-34 Score=341.61 Aligned_cols=336 Identities=17% Similarity=0.194 Sum_probs=285.5
Q ss_pred CCEEEEEeCCCCccc-----------------cCCCCCC--CCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEccccc-
Q 003911 68 KRITRIQIGHQNLQG-----------------TLPSNLQ--NLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ- 126 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~- 126 (787)
.+++.|+|++|+++| .+|+.++ ++++|++|+|++|++.+.+| .|.++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 689999999999998 4999988 99999999999999999888 69999999999999998
Q ss_pred CCc-CCCcccc-------CCCCCcEEEccCCCCCCCCCCh--hhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEe
Q 003911 127 FTS-VPSDFFT-------GLSSLQSIEIDNNPFSSWEIPQ--SLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILH 196 (787)
Q Consensus 127 l~~-~~~~~~~-------~l~~L~~L~L~~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~ 196 (787)
+++ ..|..|+ .+++|++|+|++|+++ .+|. .+.++++|+.|++++|+++ .+| .|+ .+++|++|+
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~--~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~--~L~~L~~L~ 601 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE--EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFG--TNVKLTDLK 601 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC--BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCC--TTSEESEEE
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC--ccCChhhhhcCCCCCEEECCCCCcc-cch-hhc--CCCcceEEE
Confidence 998 4444444 4559999999999999 7898 9999999999999999999 777 675 899999999
Q ss_pred ccccccccCCCcCccc-cc-ccceeeccCCCCCcCCCCccccccCcc--CceEeccccccccCCCCCC------CCCCCC
Q 003911 197 LAFNQLIGGLPASFSG-SQ-IQSLWVNGQNGNAKLGGGIDVIQNMTS--LKEIWLHSNAFSGPLPDFS------GVKQLE 266 (787)
Q Consensus 197 L~~N~l~~~~p~~~~~-~~-l~~L~~~~~~~~~~~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~------~l~~L~ 266 (787)
|++|+++ .+|..+.. .+ |+.|++.++... ..|..+..++. |+.|+|++|++++.+|.+. .+++|+
T Consensus 602 Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~----~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~ 676 (876)
T 4ecn_A 602 LDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK----YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAS 676 (876)
T ss_dssp CCSSCCS-CCCTTSCEECTTCCEEECCSSCCC----SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEE
T ss_pred CcCCccc-cchHHHhhccccCCEEECcCCCCC----cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcC
Confidence 9999999 88888765 45 888888765433 45666666654 9999999999999887654 456899
Q ss_pred EEecCCCcccccCCcccc-CCCCCCEEEccCCcccccCCCCCCce--------eeeccccCCCccCCCCCCCCchhhHHH
Q 003911 267 SLSLRDNFFTGPVPDSLV-KLESLKIVNMTNNLLQGPVPEFDRSV--------SLDMAKGSNNFCLPSPGACDPRLNALL 337 (787)
Q Consensus 267 ~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~~--------~L~~l~~~~n~~~~~~~~~~~~~~~l~ 337 (787)
.|+|++|+|+ .+|..+. .+++|+.|+|++|+|+..++.++... +|+.+++++|.+..+|....
T Consensus 677 ~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~------- 748 (876)
T 4ecn_A 677 TVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFR------- 748 (876)
T ss_dssp EEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGS-------
T ss_pred EEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCccchHHhh-------
Confidence 9999999999 6777654 89999999999999996666555433 89999999998775542210
Q ss_pred HHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEeccc------ccccccCC
Q 003911 338 SVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILAD------NNLSGMIP 411 (787)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~------N~l~g~ip 411 (787)
...+++|+.|+|++|++++ +|..++.+++|+.|+|++ |++.+.+|
T Consensus 749 ----------------------------~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip 799 (876)
T 4ecn_A 749 ----------------------------ATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWP 799 (876)
T ss_dssp ----------------------------TTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCC
T ss_pred ----------------------------hccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccCh
Confidence 0134689999999999998 899999999999999977 88999999
Q ss_pred ccCcCCCCCCeeeccCCcccccCCC--CCCCceeecCCCCCCC
Q 003911 412 EGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIG 452 (787)
Q Consensus 412 ~~l~~l~~L~~L~Ls~N~l~g~iP~--~~~~~~~~~~gn~~~~ 452 (787)
..|..+++|++|+|++|++ +.||. +..+..+.+.+|+...
T Consensus 800 ~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 800 TGITTCPSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp TTGGGCSSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred HHHhcCCCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 9999999999999999999 88886 5567889999998754
No 43
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.3e-35 Score=311.55 Aligned_cols=252 Identities=26% Similarity=0.431 Sum_probs=187.5
Q ss_pred CCCcEEEeecCCCCC--CCC-CCCCCCCCcEEEccc-ccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCC
Q 003911 92 TKLERLELQWNSISG--PLP-SLNGLASLEVVMLSN-NQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQ 167 (787)
Q Consensus 92 ~~L~~L~L~~N~l~~--~~~-~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 167 (787)
.++++|+|++|++++ .+| .|.++++|++|+|++ |++.+..|..|+++++|++|+|++|++++ .+|..|.++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~-~~p~~~~~l---- 124 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG-AIPDFLSQI---- 124 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEE-ECCGGGGGC----
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCC-cCCHHHhCC----
Confidence 467777777777776 444 566667777777763 66666555556666666666666665553 444455444
Q ss_pred EEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEec
Q 003911 168 NFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWL 247 (787)
Q Consensus 168 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L 247 (787)
++|++|+|++|++++.+|..+. ++++|++|+|
T Consensus 125 ----------------------~~L~~L~Ls~N~l~~~~p~~~~--------------------------~l~~L~~L~L 156 (313)
T 1ogq_A 125 ----------------------KTLVTLDFSYNALSGTLPPSIS--------------------------SLPNLVGITF 156 (313)
T ss_dssp ----------------------TTCCEEECCSSEEESCCCGGGG--------------------------GCTTCCEEEC
T ss_pred ----------------------CCCCEEeCCCCccCCcCChHHh--------------------------cCCCCCeEEC
Confidence 4555555555555544444332 4555666666
Q ss_pred cccccccCCC-CCCCCC-CCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCC
Q 003911 248 HSNAFSGPLP-DFSGVK-QLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPS 325 (787)
Q Consensus 248 ~~N~l~~~~~-~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~ 325 (787)
++|++++.+| .+..++ +|++|+|++|++++.+|..+..++ |++|+|++|++++.+|..
T Consensus 157 ~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~------------------- 216 (313)
T 1ogq_A 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVL------------------- 216 (313)
T ss_dssp CSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGG-------------------
T ss_pred cCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHH-------------------
Confidence 6666654444 355665 899999999999999999999998 999999999999876641
Q ss_pred CCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEeccccc
Q 003911 326 PGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNN 405 (787)
Q Consensus 326 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 405 (787)
+...++|+.|+|++|++++.+|. +..+++|++|+|++|+
T Consensus 217 ----------------------------------------~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~ 255 (313)
T 1ogq_A 217 ----------------------------------------FGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNR 255 (313)
T ss_dssp ----------------------------------------CCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSC
T ss_pred ----------------------------------------HhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCc
Confidence 11234899999999999988776 8899999999999999
Q ss_pred ccccCCccCcCCCCCCeeeccCCcccccCCC---CCCCceeecCCCCCCCCCCCC
Q 003911 406 LSGMIPEGLSVLGALKELDVSNNQLYGKIPS---FKSNAIVNTDGNPDIGKEKSS 457 (787)
Q Consensus 406 l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~---~~~~~~~~~~gn~~~~~~~~~ 457 (787)
+++.+|..+..+++|++|+|++|+++|.+|. +..+..+.+.||+++|+.|..
T Consensus 256 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 256 IYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp CEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred ccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 9999999999999999999999999999997 455677889999999998764
No 44
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.4e-35 Score=331.88 Aligned_cols=319 Identities=17% Similarity=0.187 Sum_probs=257.0
Q ss_pred CCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcC-CCccccCCCCCcEEE
Q 003911 67 DKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSV-PSDFFTGLSSLQSIE 145 (787)
Q Consensus 67 ~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~ 145 (787)
-.+++.|+|++|++++..|..|+++++|++|+|++|+|+.+++. .+++|++|+|++|+++++ .|..|+++++|++|+
T Consensus 44 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 121 (520)
T 2z7x_B 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG 121 (520)
T ss_dssp CTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE
T ss_pred cccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEE
Confidence 36899999999999998899999999999999999999965545 899999999999999986 467899999999999
Q ss_pred ccCCCCCCCCCChhhhcCCCC--CEEeccCcee--cccCCCCCCCCCC--------------------------------
Q 003911 146 IDNNPFSSWEIPQSLRNASGL--QNFSANSANI--TGQIPSFFGPDEF-------------------------------- 189 (787)
Q Consensus 146 L~~N~l~~~~~p~~~~~l~~L--~~L~l~~n~l--~~~~p~~~~~~~l-------------------------------- 189 (787)
|++|++.+ ..+..+++| +.|++++|.+ .+..|..+. .+
T Consensus 122 L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~--~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L 195 (520)
T 2z7x_B 122 LSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQ--DFNTESLHIVFPTNKEFHFILDVSVKTVANLELS 195 (520)
T ss_dssp EEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTT--TCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEEC
T ss_pred ecCcccch----hhccccccceeeEEEeeccccccccccccccc--ccccceEEEEeccCcchhhhhhhhhhcccceeec
Confidence 99999974 467777888 9999999988 677776664 32
Q ss_pred ---------------------------------------------------CCCcEEeccccccccCCCcCc-----cc-
Q 003911 190 ---------------------------------------------------PGLTILHLAFNQLIGGLPASF-----SG- 212 (787)
Q Consensus 190 ---------------------------------------------------~~L~~L~L~~N~l~~~~p~~~-----~~- 212 (787)
++|++|++++|+++|.+|..+ ..
T Consensus 196 ~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l 275 (520)
T 2z7x_B 196 NIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSL 275 (520)
T ss_dssp CEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCC
T ss_pred cccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccC
Confidence 267888888888888888776 21
Q ss_pred ccccceeeccCCC-----------------------CCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEE
Q 003911 213 SQIQSLWVNGQNG-----------------------NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESL 268 (787)
Q Consensus 213 ~~l~~L~~~~~~~-----------------------~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L 268 (787)
..++.+++..+.. +.. .. ...+..+++|++|+|++|++++.+| .+..+++|++|
T Consensus 276 ~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l-~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 353 (520)
T 2z7x_B 276 KALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRM-VH-MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETL 353 (520)
T ss_dssp CEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCC-CC-CCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEE
T ss_pred ceeEeccccccceecchhhhhcccccCceeEEEcCCCcc-cc-ccchhhCCcccEEEeECCccChhhhhhhccCCCCCEE
Confidence 2222222222111 000 00 0112688999999999999999555 68999999999
Q ss_pred ecCCCcccc--cCCccccCCCCCCEEEccCCcccccCC-C-CCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhC
Q 003911 269 SLRDNFFTG--PVPDSLVKLESLKIVNMTNNLLQGPVP-E-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMG 344 (787)
Q Consensus 269 ~L~~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~-~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~ 344 (787)
+|++|+|++ .+|..+..+++|++|+|++|++++.+| . +..+.+|+.+++++|.+......
T Consensus 354 ~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------------- 417 (520)
T 2z7x_B 354 ILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR---------------- 417 (520)
T ss_dssp ECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGG----------------
T ss_pred EccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhh----------------
Confidence 999999997 567889999999999999999998444 3 66778899999999876421100
Q ss_pred CChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCcc-CcCCCCCCee
Q 003911 345 YPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEG-LSVLGALKEL 423 (787)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-l~~l~~L~~L 423 (787)
...++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|++|
T Consensus 418 ----------------------~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 418 ----------------------CLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKI 473 (520)
T ss_dssp ----------------------SCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ----------------------hhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEE
Confidence 00148999999999999 89998889999999999999999 67776 9999999999
Q ss_pred eccCCcccccCC
Q 003911 424 DVSNNQLYGKIP 435 (787)
Q Consensus 424 ~Ls~N~l~g~iP 435 (787)
+|++|++++..+
T Consensus 474 ~l~~N~~~c~c~ 485 (520)
T 2z7x_B 474 WLHTNPWDCSCP 485 (520)
T ss_dssp ECCSSCBCCCHH
T ss_pred ECcCCCCcccCC
Confidence 999999998765
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.8e-34 Score=321.85 Aligned_cols=311 Identities=18% Similarity=0.223 Sum_probs=246.9
Q ss_pred CCEEEEEeCCCCccccCC-CCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCc--CCCccccCCCCCcE
Q 003911 68 KRITRIQIGHQNLQGTLP-SNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTS--VPSDFFTGLSSLQS 143 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~ 143 (787)
.+++.|++++|.+.+.++ ..|.++++|++|+|++|++++.+| .|.++++|++|+|++|++++ +....|.++++|++
T Consensus 54 ~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~ 133 (455)
T 3v47_A 54 QDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEM 133 (455)
T ss_dssp TTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCE
T ss_pred ccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCE
Confidence 579999999999987774 679999999999999999999866 79999999999999999998 34455999999999
Q ss_pred EEccCCCCCCCCCChh-hhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccc---------------------
Q 003911 144 IEIDNNPFSSWEIPQS-LRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQ--------------------- 201 (787)
Q Consensus 144 L~L~~N~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~--------------------- 201 (787)
|+|++|++.+ ..|.. +.++++|++|++++|.+++..|..+......+|+.|++++|.
T Consensus 134 L~L~~n~l~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 212 (455)
T 3v47_A 134 LVLRDNNIKK-IQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212 (455)
T ss_dssp EECCSSBCCS-CCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC
T ss_pred EECCCCccCc-cCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc
Confidence 9999999996 44655 899999999999999999998887751111344444444444
Q ss_pred -----------cccCCCcCccc----ccccceeeccCCCCC-------cCCCCcccccc--CccCceEeccccccccCCC
Q 003911 202 -----------LIGGLPASFSG----SQIQSLWVNGQNGNA-------KLGGGIDVIQN--MTSLKEIWLHSNAFSGPLP 257 (787)
Q Consensus 202 -----------l~~~~p~~~~~----~~l~~L~~~~~~~~~-------~~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~ 257 (787)
+++.+|..+.. .+++.|++.++.... ........+.. .++|+.|+|++|++++.+|
T Consensus 213 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 292 (455)
T 3v47_A 213 SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292 (455)
T ss_dssp EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECT
T ss_pred eeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccch
Confidence 44444433321 233344333221110 00011112222 3689999999999999877
Q ss_pred C-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHH
Q 003911 258 D-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNAL 336 (787)
Q Consensus 258 ~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l 336 (787)
. +..+++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..
T Consensus 293 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~------------------------------ 342 (455)
T 3v47_A 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRM------------------------------ 342 (455)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG------------------------------
T ss_pred hhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhH------------------------------
Confidence 5 889999999999999999888999999999999999999998766531
Q ss_pred HHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcC
Q 003911 337 LSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSV 416 (787)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 416 (787)
+...++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..+..
T Consensus 343 -----------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 393 (455)
T 3v47_A 343 -----------------------------FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDR 393 (455)
T ss_dssp -----------------------------GTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred -----------------------------hcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhcc
Confidence 123358999999999999999999999999999999999999766777899
Q ss_pred CCCCCeeeccCCcccccCCCCC
Q 003911 417 LGALKELDVSNNQLYGKIPSFK 438 (787)
Q Consensus 417 l~~L~~L~Ls~N~l~g~iP~~~ 438 (787)
+++|++|+|++|++++.+|.+.
T Consensus 394 l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 394 LTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CTTCCEEECCSSCBCCCTTTTH
T ss_pred CCcccEEEccCCCcccCCCcch
Confidence 9999999999999999999643
No 46
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.8e-34 Score=332.05 Aligned_cols=319 Identities=17% Similarity=0.190 Sum_probs=258.5
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCC-CccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVP-SDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L 146 (787)
.+++.|+|++|++++..|..|+++++|++|+|++|+|+..++. .+++|++|+|++|++++++ |..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L 153 (562)
T 3a79_B 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGL 153 (562)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEE
T ss_pred CCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEec
Confidence 5899999999999998899999999999999999999965555 8999999999999999976 578999999999999
Q ss_pred cCCCCCCCCCChhhhcCCCC--CEEeccCcee--cccCCCCCCCCCCC--------------------------------
Q 003911 147 DNNPFSSWEIPQSLRNASGL--QNFSANSANI--TGQIPSFFGPDEFP-------------------------------- 190 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L--~~L~l~~n~l--~~~~p~~~~~~~l~-------------------------------- 190 (787)
++|++.. ..+..+++| +.|++++|.+ ++..|..+. .+.
T Consensus 154 ~~n~l~~----~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~--~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~ 227 (562)
T 3a79_B 154 SAAKFRQ----LDLLPVAHLHLSCILLDLVSYHIKGGETESLQ--IPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSN 227 (562)
T ss_dssp ECSBCCT----TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEE--ECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEE
T ss_pred CCCcccc----CchhhhhhceeeEEEeecccccccccCccccc--ccCcceEEEEecCccchhhhhhhcccccceEEEec
Confidence 9999985 345556666 9999999999 777776654 222
Q ss_pred -------------------------------------------------CCcEEeccccccccCCCcCccc---ccccce
Q 003911 191 -------------------------------------------------GLTILHLAFNQLIGGLPASFSG---SQIQSL 218 (787)
Q Consensus 191 -------------------------------------------------~L~~L~L~~N~l~~~~p~~~~~---~~l~~L 218 (787)
+|++|++++|+++|.+|..+.. ..++.|
T Consensus 228 l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L 307 (562)
T 3a79_B 228 IKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSL 307 (562)
T ss_dssp EECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEE
T ss_pred ccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchhe
Confidence 7888888888898888877621 233333
Q ss_pred eeccCCCCCc-------------------------CCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCC
Q 003911 219 WVNGQNGNAK-------------------------LGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRD 272 (787)
Q Consensus 219 ~~~~~~~~~~-------------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~ 272 (787)
.+.++..+.. +.. ......+++|++|+|++|++++.+| .+.++++|++|+|++
T Consensus 308 ~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 386 (562)
T 3a79_B 308 MIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIH-MVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQR 386 (562)
T ss_dssp EEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCC-CCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCS
T ss_pred ehhhcccceeecChhhhhhhhccCcceEEEccCCCccc-ccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCC
Confidence 3333222211 000 0112688999999999999999665 689999999999999
Q ss_pred Ccccc--cCCccccCCCCCCEEEccCCcccccCC-C-CCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChh
Q 003911 273 NFFTG--PVPDSLVKLESLKIVNMTNNLLQGPVP-E-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQR 348 (787)
Q Consensus 273 N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~-~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 348 (787)
|++++ .+|..+..+++|++|+|++|++++.+| . +..+.+|+.+++++|.+....
T Consensus 387 N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~---------------------- 444 (562)
T 3a79_B 387 NGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV---------------------- 444 (562)
T ss_dssp SCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG----------------------
T ss_pred CCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch----------------------
Confidence 99996 335779999999999999999998444 3 667788999999998764211
Q ss_pred hhcccCCCCCCCCccccccCC-CceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCcc-CcCCCCCCeeecc
Q 003911 349 FAENWKGNDPCSDWIGVTCTK-GNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEG-LSVLGALKELDVS 426 (787)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-l~~l~~L~~L~Ls 426 (787)
+... ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|++|+|+
T Consensus 445 -----------------~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 445 -----------------FRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp -----------------GSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECC
T ss_pred -----------------hhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEec
Confidence 0111 48999999999999 78888889999999999999999 67776 9999999999999
Q ss_pred CCcccccCCC
Q 003911 427 NNQLYGKIPS 436 (787)
Q Consensus 427 ~N~l~g~iP~ 436 (787)
+|++++..|.
T Consensus 506 ~N~~~c~c~~ 515 (562)
T 3a79_B 506 DNPWDCTCPG 515 (562)
T ss_dssp SCCBCCCHHH
T ss_pred CCCcCCCcch
Confidence 9999998763
No 47
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.8e-35 Score=314.04 Aligned_cols=275 Identities=17% Similarity=0.217 Sum_probs=160.7
Q ss_pred CCChhHHHHHHHHHHhc-CCCCCC--CCC-----CCCCCCcccEEEcC---------CCCEEEEEeCCCCccccCCCCCC
Q 003911 27 SGDDGDAAVMLALKKSL-NPPESL--GWS-----DTDPCKWNHVVCIE---------DKRITRIQIGHQNLQGTLPSNLQ 89 (787)
Q Consensus 27 ~~~~~d~~~l~~~k~~~-~~~~~~--~w~-----~~~~C~w~gv~C~~---------~~~v~~L~l~~~~l~~~~~~~~~ 89 (787)
++..+|++||++||+++ .++..+ +|. ..++|.|.|+.|.. ..+|+.|+|++|+++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 34567999999999998 455443 683 45789999999952 246666666666666 5666666
Q ss_pred CCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEE
Q 003911 90 NLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNF 169 (787)
Q Consensus 90 ~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 169 (787)
++++|++|+|++|.|+..+..+.++++|++|+|++|+++.+| ..|.++++|++|+|++|++.+ .+|..+...
T Consensus 102 ~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp-~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~~------ 173 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALP-ASIASLNRLRELSIRACPELT-ELPEPLAST------ 173 (328)
T ss_dssp GGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCC-GGGGGCTTCCEEEEEEETTCC-CCCSCSEEE------
T ss_pred hCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCc-HHHhcCcCCCEEECCCCCCcc-ccChhHhhc------
Confidence 666666666666666633334555555555555555555432 234455555555555544333 333322210
Q ss_pred eccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccc
Q 003911 170 SANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHS 249 (787)
Q Consensus 170 ~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~ 249 (787)
..+..|. .+++|++|+|++|+++ .+|..+. ++++|++|+|++
T Consensus 174 ---------~~~~~~~--~l~~L~~L~L~~n~l~-~lp~~l~--------------------------~l~~L~~L~L~~ 215 (328)
T 4fcg_A 174 ---------DASGEHQ--GLVNLQSLRLEWTGIR-SLPASIA--------------------------NLQNLKSLKIRN 215 (328)
T ss_dssp ---------C-CCCEE--ESTTCCEEEEEEECCC-CCCGGGG--------------------------GCTTCCEEEEES
T ss_pred ---------cchhhhc--cCCCCCEEECcCCCcC-cchHhhc--------------------------CCCCCCEEEccC
Confidence 0001111 3455555555555554 3443322 444555555555
Q ss_pred cccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCC
Q 003911 250 NAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGAC 329 (787)
Q Consensus 250 N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~ 329 (787)
|++++.++.+..+++|++|+|++|++.+.+|..+..+++|
T Consensus 216 N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L---------------------------------------- 255 (328)
T 4fcg_A 216 SPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPL---------------------------------------- 255 (328)
T ss_dssp SCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCC----------------------------------------
T ss_pred CCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCC----------------------------------------
Confidence 5555444444445555555555555544455444444444
Q ss_pred CchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEeccccccccc
Q 003911 330 DPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGM 409 (787)
Q Consensus 330 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 409 (787)
+.|+|++|++.+.+|..++.+++|+.|+|++|++.+.
T Consensus 256 -------------------------------------------~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 292 (328)
T 4fcg_A 256 -------------------------------------------KRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292 (328)
T ss_dssp -------------------------------------------CEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC
T ss_pred -------------------------------------------CEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh
Confidence 4445555555556666777888888888888888888
Q ss_pred CCccCcCCCCCCeeeccCCccc
Q 003911 410 IPEGLSVLGALKELDVSNNQLY 431 (787)
Q Consensus 410 ip~~l~~l~~L~~L~Ls~N~l~ 431 (787)
+|..++.+++|+.+++..|.+.
T Consensus 293 iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 293 LPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCGGGGGSCTTCEEECCGGGSC
T ss_pred ccHHHhhccCceEEeCCHHHHH
Confidence 8888888888888888876554
No 48
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.5e-34 Score=329.31 Aligned_cols=183 Identities=25% Similarity=0.396 Sum_probs=162.3
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||+||+|..+ +|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.+.+..||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 468999999999999999999875 79999999997632 344578899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC--CcEEEeeccccee
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD--MRAKVADFGLVRL 748 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DFG~a~~ 748 (787)
|||+||+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 234 E~~~gg~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 234 EFMSGGELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp ECCCCCBHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred eecCCCcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 99999999998843 23468999999999999999999998 899999999999999854 8999999999998
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... .....+||+.|||||++.+..|+ ++||||.
T Consensus 307 ~~~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSl 342 (573)
T 3uto_A 307 LDPKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 342 (573)
T ss_dssp CCTTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHH
T ss_pred ccCCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHH
Confidence 75543 33457899999999999999999 8999983
No 49
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.7e-34 Score=328.01 Aligned_cols=343 Identities=17% Similarity=0.169 Sum_probs=270.8
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCC-CCCCCCCcEEEcccccCCcCC-CccccCCCCCcEEE
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPS-LNGLASLEVVMLSNNQFTSVP-SDFFTGLSSLQSIE 145 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~ 145 (787)
.+++.|++++|++++..|..|+++++|++|+|++|+|++.+|. |.++++|++|+|++|++++++ +..|+++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 5799999999999988889999999999999999999998884 999999999999999999753 46799999999999
Q ss_pred ccCCCCCCCCCC-hhhhcCCCCCEEeccCceecccCCCCCCC----------------------CCCCCCcEEecccccc
Q 003911 146 IDNNPFSSWEIP-QSLRNASGLQNFSANSANITGQIPSFFGP----------------------DEFPGLTILHLAFNQL 202 (787)
Q Consensus 146 L~~N~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~----------------------~~l~~L~~L~L~~N~l 202 (787)
|++|++.+ .+| ..+.++++|++|++++|.+++.+|..++. ..+++|++|++++|++
T Consensus 130 L~~n~~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 130 IGNVETFS-EIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EEESSSCC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBC
T ss_pred CCCCcccc-ccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcc
Confidence 99998544 555 68999999999999999999988887751 1367888888888888
Q ss_pred ccCC--CcCcc--ccc----------------------------------------------------------------
Q 003911 203 IGGL--PASFS--GSQ---------------------------------------------------------------- 214 (787)
Q Consensus 203 ~~~~--p~~~~--~~~---------------------------------------------------------------- 214 (787)
++.. |..+. ...
T Consensus 209 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp TTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred ccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 8642 11110 011
Q ss_pred -----------------------ccceeeccCCCCCcCCCCcccc-ccCccCceEeccccccccCCC----CCCCCCCCC
Q 003911 215 -----------------------IQSLWVNGQNGNAKLGGGIDVI-QNMTSLKEIWLHSNAFSGPLP----DFSGVKQLE 266 (787)
Q Consensus 215 -----------------------l~~L~~~~~~~~~~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~ 266 (787)
++.|++.+ +.+...|..+ .++++|++|+|++|++++.+| .+..+++|+
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~----n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~ 364 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVEN----SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQ 364 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEES----SCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCC
T ss_pred cccccchhhhcccchhhhhhcccceEEEecc----CccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCc
Confidence 11122211 1223345444 579999999999999998643 377899999
Q ss_pred EEecCCCcccccCC--ccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhC
Q 003911 267 SLSLRDNFFTGPVP--DSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMG 344 (787)
Q Consensus 267 ~L~L~~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~ 344 (787)
+|+|++|+|++..+ ..+..+++|++|+|++|++++.++.+..+.+|+.+++++|.+..++......+..+
T Consensus 365 ~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L-------- 436 (549)
T 2z81_A 365 TLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVL-------- 436 (549)
T ss_dssp EEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEE--------
T ss_pred EEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCcccccchhcCCceEE--------
Confidence 99999999995433 56899999999999999999777778888899999999999887765443221110
Q ss_pred CChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeee
Q 003911 345 YPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELD 424 (787)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ 424 (787)
...+... .+.....++|+.|+|++|+++ .+|. ...+++|+.|+|++|+|++.+|..+..+++|++|+
T Consensus 437 --------~Ls~N~l---~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 503 (549)
T 2z81_A 437 --------DVSNNNL---DSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIW 503 (549)
T ss_dssp --------ECCSSCC---SCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEE
T ss_pred --------ECCCCCh---hhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEE
Confidence 0011111 112235679999999999999 6776 57899999999999999999899999999999999
Q ss_pred ccCCcccccCCC
Q 003911 425 VSNNQLYGKIPS 436 (787)
Q Consensus 425 Ls~N~l~g~iP~ 436 (787)
|++|+++|.+|.
T Consensus 504 l~~N~~~~~~~~ 515 (549)
T 2z81_A 504 LHTNPWDCSCPR 515 (549)
T ss_dssp CCSSCBCCCHHH
T ss_pred ecCCCccCCCcc
Confidence 999999999884
No 50
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=318.23 Aligned_cols=355 Identities=17% Similarity=0.124 Sum_probs=260.2
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.|+|++|++++..|..|+++++|++|+|++|++++.+| .|.++++|++|+|++|+++++++..|+++++|++|+|
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 578999999999998778889999999999999999998776 6899999999999999999998878999999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCC-----------------------------------------
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFG----------------------------------------- 185 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~----------------------------------------- 185 (787)
++|.+..+.+|..|.++++|++|++++|++++..|..++
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~ 211 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 211 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEeccccc
Confidence 999998766899999999999999998887665443221
Q ss_pred ------------------------------------------------------------------CCCCCCCcEEeccc
Q 003911 186 ------------------------------------------------------------------PDEFPGLTILHLAF 199 (787)
Q Consensus 186 ------------------------------------------------------------------~~~l~~L~~L~L~~ 199 (787)
...+++|++|++++
T Consensus 212 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~ 291 (570)
T 2z63_A 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVS 291 (570)
T ss_dssp SCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEES
T ss_pred ccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecC
Confidence 00235566666666
Q ss_pred cccccCCCcCcccccccceeeccCCCCCcCCCC----------------ccccccCccCceEeccccccccCC---CCCC
Q 003911 200 NQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGG----------------IDVIQNMTSLKEIWLHSNAFSGPL---PDFS 260 (787)
Q Consensus 200 N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~----------------~~~~~~l~~L~~L~L~~N~l~~~~---~~~~ 260 (787)
|.++ .+|..+....++.|++.++......... ......+++|++|++++|++++.. ..+.
T Consensus 292 ~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 370 (570)
T 2z63_A 292 VTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 370 (570)
T ss_dssp CEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHH
T ss_pred ccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCcccccccccc
Confidence 6665 3555444345555555443322110000 000146778888888888887653 3467
Q ss_pred CCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCC--CCCCceeeeccccCCCccCCCCCCCCchhhHHHH
Q 003911 261 GVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP--EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLS 338 (787)
Q Consensus 261 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~ 338 (787)
.+++|++|++++|++++ +|..+..+++|++|++++|++++.+| .+..+.+|+.+++++|.+...+.........+.
T Consensus 371 ~~~~L~~L~l~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~- 448 (570)
T 2z63_A 371 GTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE- 448 (570)
T ss_dssp TCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC-
T ss_pred ccCccCEEECCCCcccc-ccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCc-
Confidence 78888888888888884 44448888888888888888887765 466777888888888876554332211111000
Q ss_pred HHHHhCCChhhhcccCCCCCCC--CccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcC
Q 003911 339 VVKLMGYPQRFAENWKGNDPCS--DWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSV 416 (787)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 416 (787)
.......... .....+...++|+.|++++|++++..|..|..+++|+.|+|++|++++..|..+..
T Consensus 449 ------------~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 516 (570)
T 2z63_A 449 ------------VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDR 516 (570)
T ss_dssp ------------EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred ------------EEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhc
Confidence 0000000000 01123445679999999999999999999999999999999999999888889999
Q ss_pred CCCCCeeeccCCcccccCCCC
Q 003911 417 LGALKELDVSNNQLYGKIPSF 437 (787)
Q Consensus 417 l~~L~~L~Ls~N~l~g~iP~~ 437 (787)
+++|++|++++|+++|.+|..
T Consensus 517 l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 517 LTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CTTCCEEECCSSCBCCCTTTT
T ss_pred ccCCcEEEecCCcccCCCcch
Confidence 999999999999999999973
No 51
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.1e-33 Score=299.37 Aligned_cols=283 Identities=19% Similarity=0.271 Sum_probs=237.1
Q ss_pred CCCCCCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCC
Q 003911 53 DTDPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVP 131 (787)
Q Consensus 53 ~~~~C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~ 131 (787)
...+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|++++++
T Consensus 26 ~~~~C~~~~~-c~---------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 26 ASLSCDRNGI-CK---------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp -CCEECTTSE-EE---------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred cCCCCCCCeE-ee---------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 3567999988 64 4667787 7787776 589999999999999877 7999999999999999999999
Q ss_pred CccccCCCCCcEEEccCCCCCCCCCChh-hhcCCCCCEEeccCceecccCC-CCCCCCCCCCCcEEeccccc-cccCCCc
Q 003911 132 SDFFTGLSSLQSIEIDNNPFSSWEIPQS-LRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQ-LIGGLPA 208 (787)
Q Consensus 132 ~~~~~~l~~L~~L~L~~N~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~L~~N~-l~~~~p~ 208 (787)
+..|.++++|++|+|++|+++ .+|.. +.++++|++|++++|++++..+ ..+. .+++|++|++++|+ +.+..|.
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~--~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~--~l~~L~~L~l~~n~~~~~~~~~ 168 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLS--NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFS--HLTKLQILRVGNMDTFTKIQRK 168 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCS--SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCT--TCTTCCEEEEEESSSCCEECTT
T ss_pred HhhcCCCCCCCEEECCCCcCC--cCCHhHhCCCccCCEEECCCCCCcccCchhhhc--cCCCCcEEECCCCccccccCHH
Confidence 999999999999999999999 46655 8999999999999999997655 4665 89999999999995 6655555
Q ss_pred CcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCcccccCCc-cccCC
Q 003911 209 SFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPD-SLVKL 286 (787)
Q Consensus 209 ~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l 286 (787)
.| .++++|++|++++|++++.+| .+..+++|++|++++|+++ .+|. .+..+
T Consensus 169 ~~--------------------------~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~ 221 (353)
T 2z80_A 169 DF--------------------------AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVT 221 (353)
T ss_dssp TT--------------------------TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHT
T ss_pred Hc--------------------------cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhc
Confidence 54 378999999999999999866 5899999999999999998 4554 45569
Q ss_pred CCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccc
Q 003911 287 ESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVT 366 (787)
Q Consensus 287 ~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (787)
++|++|+|++|++++..+..... .
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~l~~--------------------------------------------------------~ 245 (353)
T 2z80_A 222 SSVECLELRDTDLDTFHFSELST--------------------------------------------------------G 245 (353)
T ss_dssp TTEEEEEEESCBCTTCCCC-------------------------------------------------------------
T ss_pred ccccEEECCCCcccccccccccc--------------------------------------------------------c
Confidence 99999999999999765431000 0
Q ss_pred cCCCceEEEEccCCcccc----cCchhhcCCCCCCEEecccccccccCCcc-CcCCCCCCeeeccCCcccccCCC
Q 003911 367 CTKGNITVINFQKMNLTG----TISPEFASFKSLQRLILADNNLSGMIPEG-LSVLGALKELDVSNNQLYGKIPS 436 (787)
Q Consensus 367 ~~~~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-l~~l~~L~~L~Ls~N~l~g~iP~ 436 (787)
.....++.++|+++.+.+ .+|..+..+++|+.|+|++|+|+ .+|.. |..+++|++|+|++|++++.+|.
T Consensus 246 ~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 246 ETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp -CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 011356778888888887 57889999999999999999999 67776 58999999999999999998874
No 52
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.1e-32 Score=304.83 Aligned_cols=318 Identities=22% Similarity=0.309 Sum_probs=181.0
Q ss_pred CEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccC
Q 003911 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (787)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 148 (787)
+++.|++++|.+++..+ ++++++|++|+|++|++++.++ +.++++|++|+|++|+++++++ +.++++|++|+|++
T Consensus 69 ~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 143 (466)
T 1o6v_A 69 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSS 143 (466)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEE
T ss_pred CCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCC
Confidence 44455555555443222 4455555555555555544443 4445555555555555554433 44455555555555
Q ss_pred CCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeeccCCCCC
Q 003911 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGNA 227 (787)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~~~~~~ 227 (787)
|++.. ++ .+..+++|+.|+++ |.+.+..+ +. .+++|++|++++|++++. +. +.. .+|+.|++.++...
T Consensus 144 n~l~~--~~-~~~~l~~L~~L~l~-~~~~~~~~--~~--~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~- 212 (466)
T 1o6v_A 144 NTISD--IS-ALSGLTSLQQLSFG-NQVTDLKP--LA--NLTTLERLDISSNKVSDI-SV-LAKLTNLESLIATNNQIS- 212 (466)
T ss_dssp EEECC--CG-GGTTCTTCSEEEEE-ESCCCCGG--GT--TCTTCCEEECCSSCCCCC-GG-GGGCTTCSEEECCSSCCC-
T ss_pred CccCC--Ch-hhccCCcccEeecC-CcccCchh--hc--cCCCCCEEECcCCcCCCC-hh-hccCCCCCEEEecCCccc-
Confidence 54442 22 24444455555443 23332222 32 556666666666665532 21 221 34445544433211
Q ss_pred cCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCC
Q 003911 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFD 307 (787)
Q Consensus 228 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 307 (787)
+.+ .++.+++|++|++++|++++. +.+..+++|+.|++++|++++..| +..+++|++|++++|++++.++ +.
T Consensus 213 ---~~~-~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~ 284 (466)
T 1o6v_A 213 ---DIT-PLGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LA 284 (466)
T ss_dssp ---CCG-GGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GT
T ss_pred ---ccc-cccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-cc
Confidence 111 145566666666666666543 345556666666666666664333 5666666666666666665444 55
Q ss_pred CceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCc
Q 003911 308 RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTIS 387 (787)
Q Consensus 308 ~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p 387 (787)
.+..|+.+++++|.+...+ .+...++|+.|+|++|++++..|
T Consensus 285 ~l~~L~~L~L~~n~l~~~~--------------------------------------~~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 285 GLTALTNLELNENQLEDIS--------------------------------------PISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp TCTTCSEEECCSSCCSCCG--------------------------------------GGGGCTTCSEEECCSSCCSCCGG
T ss_pred CCCccCeEEcCCCcccCch--------------------------------------hhcCCCCCCEEECcCCcCCCchh
Confidence 5555666666665544322 12344688899999999888766
Q ss_pred hhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC--CCCCceeecCCCCCCC
Q 003911 388 PEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIG 452 (787)
Q Consensus 388 ~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~--~~~~~~~~~~gn~~~~ 452 (787)
+..+++|+.|++++|++++. ..+..+++|++|++++|++++.+|- +..+..+.+.+|++.+
T Consensus 327 --~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 327 --VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp --GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred --hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 78888999999999988864 4788889999999999999887772 4556677777776643
No 53
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.7e-32 Score=293.12 Aligned_cols=232 Identities=20% Similarity=0.311 Sum_probs=158.2
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
.+++.|+++++++. .++ .+..+++|++|+|++|++++.++ +.++++|++|+|++|+++.++ .|.++++|++|+|+
T Consensus 44 ~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~~--~~~~l~~L~~L~l~ 118 (347)
T 4fmz_A 44 ESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDIS--ALQNLTNLRELYLN 118 (347)
T ss_dssp TTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEECT
T ss_pred ccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCch--HHcCCCcCCEEECc
Confidence 57999999999998 455 48899999999999999998766 999999999999999999874 59999999999999
Q ss_pred CCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeeccCCCC
Q 003911 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGN 226 (787)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~~~~~ 226 (787)
+|++.. ++. +..+++|+.|++++|.....++. +. .+++|++|++++|.+.+..+ +.. .+++.|++.++...
T Consensus 119 ~n~i~~--~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~--~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 119 EDNISD--ISP-LANLTKMYSLNLGANHNLSDLSP-LS--NMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp TSCCCC--CGG-GTTCTTCCEEECTTCTTCCCCGG-GT--TCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred CCcccC--chh-hccCCceeEEECCCCCCcccccc-hh--hCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 999984 454 88999999999999976655555 44 89999999999999885443 321 33444444332211
Q ss_pred CcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCC
Q 003911 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (787)
Q Consensus 227 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 306 (787)
..+ .+..+++|+.|++++|.+++..+ +..+++|++|++++|++++ +|. +..+++|++|++++|.+++. +.+
T Consensus 191 ----~~~-~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~~~ 261 (347)
T 4fmz_A 191 ----DIS-PLASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-NAV 261 (347)
T ss_dssp ----CCG-GGGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGG
T ss_pred ----ccc-cccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-hhH
Confidence 111 14455555555555555554433 4455555555555555553 222 55555555555555555542 333
Q ss_pred CCceeeeccccCCCc
Q 003911 307 DRSVSLDMAKGSNNF 321 (787)
Q Consensus 307 ~~~~~L~~l~~~~n~ 321 (787)
..+.+|+.+++++|.
T Consensus 262 ~~l~~L~~L~l~~n~ 276 (347)
T 4fmz_A 262 KDLTKLKMLNVGSNQ 276 (347)
T ss_dssp TTCTTCCEEECCSSC
T ss_pred hcCCCcCEEEccCCc
Confidence 444444444444443
No 54
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.7e-32 Score=323.45 Aligned_cols=333 Identities=18% Similarity=0.199 Sum_probs=258.2
Q ss_pred EEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEccccc-CCcCCCccccCCCCCcEEEccC
Q 003911 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ-FTSVPSDFFTGLSSLQSIEIDN 148 (787)
Q Consensus 71 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~ 148 (787)
...|.++++++ .+|. -.++|++|+|++|+|++..| .|.++++|++|+|++|. +..+++..|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 34566788888 6776 45899999999999999877 79999999999999995 5567789999999999999999
Q ss_pred CCCCCCCCChhhhcCCCCCEEeccCceecccCCCC--CCCCCCCCCcEEeccccccccCCC-cCccc-ccccceeeccCC
Q 003911 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSF--FGPDEFPGLTILHLAFNQLIGGLP-ASFSG-SQIQSLWVNGQN 224 (787)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~--~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~-~~l~~L~~~~~~ 224 (787)
|++.. ..|..|.++++|++|+|++|.+++.+|.. |+ .+++|++|+|++|.+++..| ..|.+ .+|+.|++.++.
T Consensus 83 N~l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~--~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~ 159 (844)
T 3j0a_A 83 SKIYF-LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFR--NLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQ 159 (844)
T ss_dssp CCCCE-ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCS--SCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSC
T ss_pred CcCcc-cCHhHccCCcccCEeeCcCCCCCcccccCcccc--ccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCc
Confidence 99996 56999999999999999999999877665 65 89999999999999998765 45654 567777776543
Q ss_pred CCCcCCCCccccccC--ccCceEeccccccccCCC-CCCCCCC------CCEEecCCCcccccCCccccCC---------
Q 003911 225 GNAKLGGGIDVIQNM--TSLKEIWLHSNAFSGPLP-DFSGVKQ------LESLSLRDNFFTGPVPDSLVKL--------- 286 (787)
Q Consensus 225 ~~~~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~-~~~~l~~------L~~L~L~~N~l~~~~p~~l~~l--------- 286 (787)
.....+..+..+ ++|+.|+|++|.+.+..+ .+..+++ |+.|+|++|++++.+|..+...
T Consensus 160 ---i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L 236 (844)
T 3j0a_A 160 ---IFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSL 236 (844)
T ss_dssp ---CCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEE
T ss_pred ---CCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccce
Confidence 333345556666 789999999999888665 3544444 8899999988887766655432
Q ss_pred -----------------------------CCCCEEEccCCcccccCCC-CCCceeeeccccCCCccCCCCCCCCchhhHH
Q 003911 287 -----------------------------ESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNAL 336 (787)
Q Consensus 287 -----------------------------~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l 336 (787)
++|+.|+|++|.+++.+|. +..+.+|+.+++++|.+...+..
T Consensus 237 ~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~-------- 308 (844)
T 3j0a_A 237 ILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE-------- 308 (844)
T ss_dssp ECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT--------
T ss_pred ecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH--------
Confidence 5788888888888877665 55677788888888776543211
Q ss_pred HHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcC
Q 003911 337 LSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSV 416 (787)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 416 (787)
.+...++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|..
T Consensus 309 ----------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 360 (844)
T 3j0a_A 309 ----------------------------AFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKF 360 (844)
T ss_dssp ----------------------------TTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCS
T ss_pred ----------------------------HhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcC
Confidence 1233457888888888888888888888888888888888888777777888
Q ss_pred CCCCCeeeccCCcccccCCCCCCCceeecCCCCC
Q 003911 417 LGALKELDVSNNQLYGKIPSFKSNAIVNTDGNPD 450 (787)
Q Consensus 417 l~~L~~L~Ls~N~l~g~iP~~~~~~~~~~~gn~~ 450 (787)
+++|++|+|++|++++ +|.+..+..+.+.+|..
T Consensus 361 l~~L~~L~Ls~N~l~~-i~~~~~L~~L~l~~N~l 393 (844)
T 3j0a_A 361 LEKLQTLDLRDNALTT-IHFIPSIPDIFLSGNKL 393 (844)
T ss_dssp CCCCCEEEEETCCSCC-CSSCCSCSEEEEESCCC
T ss_pred CCCCCEEECCCCCCCc-ccCCCCcchhccCCCCc
Confidence 8888888888888875 34455555556655543
No 55
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6e-32 Score=289.44 Aligned_cols=194 Identities=23% Similarity=0.341 Sum_probs=126.5
Q ss_pred EEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCC
Q 003911 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (787)
Q Consensus 71 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 149 (787)
+.+++++++++ .+|..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+++++++..|.++++|++|+|++|
T Consensus 36 ~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 36 RVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred CEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 34556666666 6666664 578888888888887666 6788888888888888888887777888888888888888
Q ss_pred CCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccc--cCCCcCcccccccceeeccCCCCC
Q 003911 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLI--GGLPASFSGSQIQSLWVNGQNGNA 227 (787)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~~~l~~L~~~~~~~~~ 227 (787)
+++ .+|..+. ++|++|++++|++++..+..|. .+++|++|++++|+++ +..|..+.
T Consensus 113 ~l~--~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~~---------------- 170 (332)
T 2ft3_A 113 HLV--EIPPNLP--SSLVELRIHDNRIRKVPKGVFS--GLRNMNCIEMGGNPLENSGFEPGAFD---------------- 170 (332)
T ss_dssp CCC--SCCSSCC--TTCCEEECCSSCCCCCCSGGGS--SCSSCCEEECCSCCCBGGGSCTTSSC----------------
T ss_pred cCC--ccCcccc--ccCCEEECCCCccCccCHhHhC--CCccCCEEECCCCccccCCCCccccc----------------
Confidence 887 5666555 6788888888888776666665 7788888888888875 35555554
Q ss_pred cCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccccc
Q 003911 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 228 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
.+ +|+.|++++|++++.+..+. ++|++|+|++|++++..|..+..+++|++|+|++|++++.
T Consensus 171 ----------~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 171 ----------GL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp ----------SC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC
T ss_pred ----------CC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC
Confidence 23 44444555554444333322 4444455555555444444444445555555555544443
No 56
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.5e-33 Score=296.09 Aligned_cols=186 Identities=23% Similarity=0.385 Sum_probs=165.1
Q ss_pred hhcCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
...++|++.+.||+|+||.||+|+. .+|+.||||++..........+++.+|+++++.++||||+++++++.+.+..|+
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 3456899999999999999999987 489999999998766666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 92 v~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 163 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNE 163 (328)
T ss_dssp EECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGG
T ss_pred EEECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCcee
Confidence 99999999999998542 368999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC--cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS--SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~DiWS~ 785 (787)
..... .....+||+.|+|||++.+..+. ++||||.
T Consensus 164 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Diwsl 200 (328)
T 3fe3_A 164 FTVGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 200 (328)
T ss_dssp GSSSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHH
T ss_pred cCCCC--ccccccCCcceeCcccccCCCcCCchhhhhhh
Confidence 65432 23346799999999999988875 7999983
No 57
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=1.2e-31 Score=287.01 Aligned_cols=263 Identities=20% Similarity=0.282 Sum_probs=199.0
Q ss_pred EEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCC
Q 003911 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (787)
Q Consensus 71 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 149 (787)
+.+++++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+++++.+..|.++++|++|+|++|
T Consensus 34 ~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 34 RVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp TEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred eEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 34556666666 5676665 688899999999988777 6888999999999999999988888999999999999999
Q ss_pred CCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEecccccccc--CCCcCcccccccceeeccCCCCC
Q 003911 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIG--GLPASFSGSQIQSLWVNGQNGNA 227 (787)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~~~l~~L~~~~~~~~~ 227 (787)
+++ .+|..+. ++|++|++++|.+++..+..|. .+++|++|++++|++.. ..+..
T Consensus 111 ~l~--~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~------------------ 166 (330)
T 1xku_A 111 QLK--ELPEKMP--KTLQELRVHENEITKVRKSVFN--GLNQMIVVELGTNPLKSSGIENGA------------------ 166 (330)
T ss_dssp CCS--BCCSSCC--TTCCEEECCSSCCCBBCHHHHT--TCTTCCEEECCSSCCCGGGBCTTG------------------
T ss_pred cCC--ccChhhc--ccccEEECCCCcccccCHhHhc--CCccccEEECCCCcCCccCcChhh------------------
Confidence 988 5676654 7899999999999888777775 78899999999998863 44443
Q ss_pred cCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC-C
Q 003911 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-F 306 (787)
Q Consensus 228 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~ 306 (787)
+.++++|++|++++|+++..+..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++.++. +
T Consensus 167 --------~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 236 (330)
T 1xku_A 167 --------FQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL 236 (330)
T ss_dssp --------GGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTG
T ss_pred --------ccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhc
Confidence 3478888899999988887665544 7888999999998887788888888999999999888876653 2
Q ss_pred CCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccC
Q 003911 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (787)
Q Consensus 307 ~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~ 386 (787)
.. .++|+.|+|++|+++ .+
T Consensus 237 ~~------------------------------------------------------------l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 237 AN------------------------------------------------------------TPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp GG------------------------------------------------------------STTCCEEECCSSCCS-SC
T ss_pred cC------------------------------------------------------------CCCCCEEECCCCcCc-cC
Confidence 22 235666666666666 56
Q ss_pred chhhcCCCCCCEEecccccccccCCccCcC------CCCCCeeeccCCccc
Q 003911 387 SPEFASFKSLQRLILADNNLSGMIPEGLSV------LGALKELDVSNNQLY 431 (787)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~------l~~L~~L~Ls~N~l~ 431 (787)
|..+..+++|++|+|++|+|++..+..|.. ...|+.|++++|++.
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 666666666777777777666554445533 255666677776664
No 58
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=1e-31 Score=287.63 Aligned_cols=277 Identities=19% Similarity=0.262 Sum_probs=237.3
Q ss_pred CCcccEEEcCC----------CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccc
Q 003911 57 CKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNN 125 (787)
Q Consensus 57 C~w~gv~C~~~----------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N 125 (787)
|.|..+.|... .+++.|++++|++++..|..|.++++|++|+|++|+|++..| .|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 78999999642 378999999999998888899999999999999999999877 7999999999999999
Q ss_pred cCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceec--ccCCCCCCCCCCCCCcEEeccccccc
Q 003911 126 QFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANIT--GQIPSFFGPDEFPGLTILHLAFNQLI 203 (787)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~--~~~p~~~~~~~l~~L~~L~L~~N~l~ 203 (787)
+++.+++..+ ++|++|+|++|++.. ..+..|..+++|+.|++++|.++ +..|..+. .+ +|++|++++|+++
T Consensus 113 ~l~~l~~~~~---~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 113 HLVEIPPNLP---SSLVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD--GL-KLNYLRISEAKLT 185 (332)
T ss_dssp CCCSCCSSCC---TTCCEEECCSSCCCC-CCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSC--SC-CCSCCBCCSSBCS
T ss_pred cCCccCcccc---ccCCEEECCCCccCc-cCHhHhCCCccCCEEECCCCccccCCCCccccc--CC-ccCEEECcCCCCC
Confidence 9999988755 899999999999995 34567999999999999999996 47777775 66 9999999999998
Q ss_pred cCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCcccccCCcc
Q 003911 204 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 282 (787)
Q Consensus 204 ~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~ 282 (787)
+ +|..+ .++|++|+|++|.+++.++ .+..+++|+.|+|++|+|++..|..
T Consensus 186 ~-l~~~~----------------------------~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 236 (332)
T 2ft3_A 186 G-IPKDL----------------------------PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS 236 (332)
T ss_dssp S-CCSSS----------------------------CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTG
T ss_pred c-cCccc----------------------------cCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhH
Confidence 5 55543 2689999999999999876 5899999999999999999888889
Q ss_pred ccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCc
Q 003911 283 LVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW 362 (787)
Q Consensus 283 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (787)
+..+++|++|+|++|+++..++.+
T Consensus 237 ~~~l~~L~~L~L~~N~l~~lp~~l-------------------------------------------------------- 260 (332)
T 2ft3_A 237 LSFLPTLRELHLDNNKLSRVPAGL-------------------------------------------------------- 260 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTG--------------------------------------------------------
T ss_pred hhCCCCCCEEECCCCcCeecChhh--------------------------------------------------------
Confidence 999999999999999998443321
Q ss_pred cccccCCCceEEEEccCCcccccCchhhcCC------CCCCEEeccccccc--ccCCccCcCCCCCCeeeccCCc
Q 003911 363 IGVTCTKGNITVINFQKMNLTGTISPEFASF------KSLQRLILADNNLS--GMIPEGLSVLGALKELDVSNNQ 429 (787)
Q Consensus 363 ~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l------~~L~~L~Ls~N~l~--g~ip~~l~~l~~L~~L~Ls~N~ 429 (787)
...++|+.|++++|++++..+..|... ..|+.|+|++|.+. +..|..|..+++|+.|++++|+
T Consensus 261 ----~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 261 ----PDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp ----GGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ----hcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 123488999999999998877777653 67999999999997 6778889999999999999985
No 59
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.98 E-value=6.9e-33 Score=305.63 Aligned_cols=195 Identities=24% Similarity=0.372 Sum_probs=166.4
Q ss_pred eHHHHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEE
Q 003911 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCL 661 (787)
Q Consensus 584 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 661 (787)
..+..+...++|++.+.||+|+||+||+|+.. +++.||+|++++.... ......+.+|..++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555666789999999999999999999876 5889999999763221 223345889999999999999999999999
Q ss_pred eCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEe
Q 003911 662 DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 741 (787)
Q Consensus 662 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 741 (787)
+.+..|+||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+||||||||+|||++.++.+||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEc
Confidence 999999999999999999998542 2468999999999999999999998 899999999999999999999999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccc-----cCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV-----HTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~-~~DiWS~ 785 (787)
|||+|+.............+||+.|||||++. +..++ ++|+||.
T Consensus 218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSl 267 (437)
T 4aw2_A 218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSL 267 (437)
T ss_dssp CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHH
T ss_pred chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHH
Confidence 99999877655443344468999999999997 45677 8999983
No 60
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.98 E-value=6.7e-33 Score=297.11 Aligned_cols=187 Identities=27% Similarity=0.475 Sum_probs=153.7
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
.+.++|++.+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 45678999999999999999999864 7999999999764432 335678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 86 v~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 99999999999998542 368999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
............+||+.|+|||++.+..+ + ++||||.
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl 196 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSM 196 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHH
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHH
Confidence 65443333445679999999999998876 5 7999983
No 61
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.98 E-value=1.3e-31 Score=300.62 Aligned_cols=302 Identities=22% Similarity=0.332 Sum_probs=255.7
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
.+++.|++++|.+++..+ ++++++|++|+|++|++++.++ +.++++|++|+|++|++++++ .+.++++|++|+++
T Consensus 90 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~ 164 (466)
T 1o6v_A 90 TKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG 164 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE
T ss_pred ccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH-HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC
Confidence 589999999999996554 9999999999999999998765 999999999999999999976 38999999999997
Q ss_pred CCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcc-cccccceeeccCCCC
Q 003911 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFS-GSQIQSLWVNGQNGN 226 (787)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~~~l~~L~~~~~~~~ 226 (787)
|.+.. ++ .+.++++|+.|++++|.+++.. .+. .+++|++|++++|++++..| +. ..+|+.|++.++...
T Consensus 165 -~~~~~--~~-~~~~l~~L~~L~l~~n~l~~~~--~l~--~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 165 -NQVTD--LK-PLANLTTLERLDISSNKVSDIS--VLA--KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp -ESCCC--CG-GGTTCTTCCEEECCSSCCCCCG--GGG--GCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred -CcccC--ch-hhccCCCCCEEECcCCcCCCCh--hhc--cCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 55553 23 4899999999999999998653 344 89999999999999997766 32 256777777665432
Q ss_pred CcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCC
Q 003911 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (787)
Q Consensus 227 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 306 (787)
. ...+..+++|+.|++++|.+++.++ +..+++|+.|++++|++++..| +..+++|++|+|++|++++.++ +
T Consensus 235 ~-----~~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~ 305 (466)
T 1o6v_A 235 D-----IGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-I 305 (466)
T ss_dssp C-----CGGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-G
T ss_pred c-----chhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-h
Confidence 2 2468899999999999999998776 8889999999999999996544 8999999999999999998766 7
Q ss_pred CCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccC
Q 003911 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (787)
Q Consensus 307 ~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~ 386 (787)
..+.+|+.+++++|.+...+. +...++|+.|++++|++++.
T Consensus 306 ~~l~~L~~L~L~~n~l~~~~~--------------------------------------~~~l~~L~~L~l~~n~l~~~- 346 (466)
T 1o6v_A 306 SNLKNLTYLTLYFNNISDISP--------------------------------------VSSLTKLQRLFFYNNKVSDV- 346 (466)
T ss_dssp GGCTTCSEEECCSSCCSCCGG--------------------------------------GGGCTTCCEEECCSSCCCCC-
T ss_pred cCCCCCCEEECcCCcCCCchh--------------------------------------hccCccCCEeECCCCccCCc-
Confidence 778889999999997664421 12346899999999999986
Q ss_pred chhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCC
Q 003911 387 SPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 435 (787)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP 435 (787)
..+..+++|+.|+|++|++++..| +..+++|+.|++++|++++.+.
T Consensus 347 -~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~p~ 392 (466)
T 1o6v_A 347 -SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV 392 (466)
T ss_dssp -GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECCCB
T ss_pred -hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCCch
Confidence 579999999999999999998877 8999999999999999998533
No 62
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.98 E-value=7.9e-33 Score=302.82 Aligned_cols=192 Identities=25% Similarity=0.364 Sum_probs=164.5
Q ss_pred HHHHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEe
Q 003911 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (787)
Q Consensus 585 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 662 (787)
.+.++...++|++.+.||+|+||.||+|+.. +++.||+|++++... .....+.+.+|+++++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455556789999999999999999999876 689999999976322 12233468899999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEee
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD 742 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 742 (787)
.+..|+||||+++|+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~D 211 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 211 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEec
Confidence 9999999999999999998853 258899999999999999999998 8999999999999999999999999
Q ss_pred cccceecCCCCCceeeeeccccCcccccccccCC----cC-cceeecC
Q 003911 743 FGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTR----WS-SCSYWAG 785 (787)
Q Consensus 743 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~-~~DiWS~ 785 (787)
||+|+.............+||+.|+|||++.+.. ++ ++|+||.
T Consensus 212 FG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSl 259 (410)
T 3v8s_A 212 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 259 (410)
T ss_dssp CTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHH
T ss_pred cceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecc
Confidence 9999887554333334578999999999998765 66 8999983
No 63
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.98 E-value=2.7e-32 Score=291.64 Aligned_cols=184 Identities=28% Similarity=0.419 Sum_probs=161.3
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
++|++.+.||+|+||.||+|+.. +|+.||+|++++... .....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57999999999999999999876 699999999976432 2345677899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 85 E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 85 EYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp ECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999998854 1368999999999999999999998 899999999999999999999999999998643
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
... ......+||+.|+|||++.+..++ ++|+||.
T Consensus 157 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 191 (337)
T 1o6l_A 157 SDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191 (337)
T ss_dssp CTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHH
T ss_pred cCC-CcccccccChhhCChhhhcCCCCCchhhcccc
Confidence 322 223446799999999999998888 8999983
No 64
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.98 E-value=5e-31 Score=293.71 Aligned_cols=308 Identities=17% Similarity=0.125 Sum_probs=237.5
Q ss_pred CCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 67 DKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 67 ~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
-.+++.|++++|++++. | .++.+++|++|+|++|+|++. | +..+++|++|+|++|+|++++ |+++++|++|+|
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~L 113 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTNLD---VTPLTKLTYLNC 113 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEEC
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCceee---cCCCCcCCEEEC
Confidence 36899999999999964 5 799999999999999999986 3 899999999999999999985 899999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeeccCCC
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNG 225 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~~~~ 225 (787)
++|++++ +| +..+++|++|++++|++++. + ++ .+++|++|++++|+..+.++ +.. .+++.|++.++..
T Consensus 114 ~~N~l~~--l~--~~~l~~L~~L~l~~N~l~~l-~--l~--~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 114 DTNKLTK--LD--VSQNPLLTYLNCARNTLTEI-D--VS--HNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp CSSCCSC--CC--CTTCTTCCEEECTTSCCSCC-C--CT--TCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSCC
T ss_pred CCCcCCe--ec--CCCCCcCCEEECCCCcccee-c--cc--cCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCcc
Confidence 9999995 45 89999999999999999985 3 54 89999999999997666663 322 5577777665432
Q ss_pred CCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC
Q 003911 226 NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 226 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 305 (787)
. +.+ +..+++|+.|++++|++++. .+..+++|+.|+|++|+|++ +| +..+++|++|++++|++++.++.
T Consensus 183 ~----~l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 183 T----ELD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp C----CCC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred c----eec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 2 222 77888899999999998876 47888899999999999986 66 88889999999999999886543
Q ss_pred CCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCccccc
Q 003911 306 FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT 385 (787)
Q Consensus 306 ~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~ 385 (787)
.+..|+.+++++|.+..+.-.... ..+..| ....++|+.|++++|.+.+.
T Consensus 252 --~l~~L~~L~l~~n~L~~L~l~~n~---------------------~~~~~~-------~~~l~~L~~L~Ls~n~~l~~ 301 (457)
T 3bz5_A 252 --TLSKLTTLHCIQTDLLEIDLTHNT---------------------QLIYFQ-------AEGCRKIKELDVTHNTQLYL 301 (457)
T ss_dssp --TCTTCCEEECTTCCCSCCCCTTCT---------------------TCCEEE-------CTTCTTCCCCCCTTCTTCCE
T ss_pred --HCCCCCEEeccCCCCCEEECCCCc---------------------cCCccc-------ccccccCCEEECCCCcccce
Confidence 333444444444433322110000 000000 12336889999999988887
Q ss_pred Cchh--------hcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCCC
Q 003911 386 ISPE--------FASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSF 437 (787)
Q Consensus 386 ~p~~--------~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~~ 437 (787)
+|.. +..+++|+.|+|++|+|++ +| ++.+++|++||+++|+|+| +|.+
T Consensus 302 l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~-l~~L 357 (457)
T 3bz5_A 302 LDCQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD-FSSV 357 (457)
T ss_dssp EECTTCCCSCCCCTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB-CTTG
T ss_pred eccCCCcceEechhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC-cccc
Confidence 7753 5566789999999999997 43 8899999999999999998 4543
No 65
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.98 E-value=7.4e-32 Score=283.81 Aligned_cols=182 Identities=25% Similarity=0.457 Sum_probs=161.3
Q ss_pred cCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 46899999999999999999985 478999999997643 233567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 97 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp ECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999998854 358899999999999999999998 899999999999999999999999999998775
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... ......||+.|+|||++.+..++ ++||||.
T Consensus 168 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 202 (297)
T 3fxz_A 168 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202 (297)
T ss_dssp STTC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHH
T ss_pred Cccc-ccCCccCCcCccChhhhcCCCCCcHHHHHHH
Confidence 5432 23346799999999999999888 8999983
No 66
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=9.3e-32 Score=294.83 Aligned_cols=346 Identities=14% Similarity=0.080 Sum_probs=259.1
Q ss_pred CCCCC-CCCC-cccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCC-CCCCCCCcEEEccccc
Q 003911 50 GWSDT-DPCK-WNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPS-LNGLASLEVVMLSNNQ 126 (787)
Q Consensus 50 ~w~~~-~~C~-w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~ 126 (787)
+|... +||. |.+..|.... +.+............-..+++|+.|++++|.++..++. |.++++|++|+|++|+
T Consensus 5 ~~~~~~~C~~~~~~~~c~~~~----~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~ 80 (390)
T 3o6n_A 5 PRQPEYKCIDSNLQYDCVFYD----VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 80 (390)
T ss_dssp --CCEECBCC------EEEES----CEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSC
T ss_pred CCCCccceehhhhhhccceee----eeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCc
Confidence 67654 6654 5555554211 12222222212222234578999999999999987774 7899999999999999
Q ss_pred CCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCC
Q 003911 127 FTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGL 206 (787)
Q Consensus 127 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~ 206 (787)
++++++..|.++++|++|+|++|+++. ..|..|.++++|++|++++|.++..++..|. .+++|++|+|++|++++..
T Consensus 81 i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~--~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 81 IEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFH--NTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCBCC
T ss_pred ccccChhhccCCCCcCEEECCCCCCCc-CCHHHhcCCCCCCEEECCCCccCcCCHHHhc--CCCCCcEEECCCCccCccC
Confidence 999999999999999999999999996 5577899999999999999999977777676 8999999999999999888
Q ss_pred CcCccc-ccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccC
Q 003911 207 PASFSG-SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVK 285 (787)
Q Consensus 207 p~~~~~-~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 285 (787)
|..+.. .+|+.|++.++..... .+..+++|+.|++++|.+++. ...++|+.|++++|+++. +|..+
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~------~~~~l~~L~~L~l~~n~l~~~----~~~~~L~~L~l~~n~l~~-~~~~~-- 224 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV------DLSLIPSLFHANVSYNLLSTL----AIPIAVEELDASHNSINV-VRGPV-- 224 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC------CGGGCTTCSEEECCSSCCSEE----ECCSSCSEEECCSSCCCE-EECCC--
T ss_pred hhhccCCCCCCEEECCCCcCCcc------ccccccccceeeccccccccc----CCCCcceEEECCCCeeee-ccccc--
Confidence 887765 5677777765433221 255678888888888887753 234578888888888884 44433
Q ss_pred CCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCcccc
Q 003911 286 LESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGV 365 (787)
Q Consensus 286 l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (787)
.++|+.|++++|++++. +.+..+..|+.+++++|.+...+. ..
T Consensus 225 ~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~------------------------------------~~ 267 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMY------------------------------------HP 267 (390)
T ss_dssp CSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEES------------------------------------GG
T ss_pred cccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcCh------------------------------------hH
Confidence 47888888888888864 556677778888888886553311 12
Q ss_pred ccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCC-CCCCCceee
Q 003911 366 TCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP-SFKSNAIVN 444 (787)
Q Consensus 366 ~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP-~~~~~~~~~ 444 (787)
+...++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+++.... .+..+..+.
T Consensus 268 ~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~ 345 (390)
T 3o6n_A 268 FVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLT 345 (390)
T ss_dssp GTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEE
T ss_pred ccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEE
Confidence 3345689999999999986 5667788899999999999998 678888889999999999999986533 366778889
Q ss_pred cCCCCCCCCC
Q 003911 445 TDGNPDIGKE 454 (787)
Q Consensus 445 ~~gn~~~~~~ 454 (787)
+.||++.|..
T Consensus 346 l~~N~~~~~~ 355 (390)
T 3o6n_A 346 LSHNDWDCNS 355 (390)
T ss_dssp CCSSCEEHHH
T ss_pred cCCCCccchh
Confidence 9999988753
No 67
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=2.1e-31 Score=287.22 Aligned_cols=281 Identities=19% Similarity=0.314 Sum_probs=236.8
Q ss_pred CCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 67 DKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 67 ~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
-.+++.|++++|++++ +++ +..+++|++|+|++|.++.. +.+.++++|++|+|++|+++++++ +..+++|++|++
T Consensus 65 ~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~-~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l 139 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI-SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNL 139 (347)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEEC
T ss_pred cCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc-hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEEC
Confidence 3589999999999995 444 99999999999999999974 679999999999999999999876 899999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeeccCCC
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNG 225 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~~~~ 225 (787)
++|.... .+..+..+++|++|++++|.+.+..+ +. .+++|++|++++|++.+..+ +.. .+++.|++.++..
T Consensus 140 ~~n~~~~--~~~~~~~l~~L~~L~l~~~~~~~~~~--~~--~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 211 (347)
T 4fmz_A 140 GANHNLS--DLSPLSNMTGLNYLTVTESKVKDVTP--IA--NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQI 211 (347)
T ss_dssp TTCTTCC--CCGGGTTCTTCCEEECCSSCCCCCGG--GG--GCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred CCCCCcc--cccchhhCCCCcEEEecCCCcCCchh--hc--cCCCCCEEEccCCccccccc--ccCCCccceeecccCCC
Confidence 9997663 35559999999999999999987665 54 89999999999999986443 332 5566666655432
Q ss_pred CCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC
Q 003911 226 NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 226 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 305 (787)
. ..+ .+..+++|++|++++|++++.++ +..+++|++|++++|++++ + +.+..+++|++|++++|++++. +.
T Consensus 212 ~----~~~-~~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~ 282 (347)
T 4fmz_A 212 T----DIT-PVANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SV 282 (347)
T ss_dssp C----CCG-GGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GG
T ss_pred C----CCc-hhhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hh
Confidence 2 222 27899999999999999998776 8899999999999999995 4 5699999999999999999864 21
Q ss_pred CCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCccccc
Q 003911 306 FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT 385 (787)
Q Consensus 306 ~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~ 385 (787)
+ ...++|+.|++++|++++.
T Consensus 283 ~------------------------------------------------------------~~l~~L~~L~L~~n~l~~~ 302 (347)
T 4fmz_A 283 L------------------------------------------------------------NNLSQLNSLFLNNNQLGNE 302 (347)
T ss_dssp G------------------------------------------------------------GGCTTCSEEECCSSCCCGG
T ss_pred h------------------------------------------------------------cCCCCCCEEECcCCcCCCc
Confidence 1 1234899999999999999
Q ss_pred CchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCccc
Q 003911 386 ISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY 431 (787)
Q Consensus 386 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~ 431 (787)
.|..|+.+++|+.|+|++|++++..| +..+++|++||+++|+++
T Consensus 303 ~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 303 DMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999999999999999997666 889999999999999985
No 68
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.8e-32 Score=300.25 Aligned_cols=195 Identities=25% Similarity=0.358 Sum_probs=166.2
Q ss_pred eHHHHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEE
Q 003911 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCL 661 (787)
Q Consensus 584 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 661 (787)
.+++.+...++|++.+.||+|+||.||+|+.. +++.||||++++... .....+.+.+|.+++.+++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555566789999999999999999999875 799999999976322 2233456889999999999999999999999
Q ss_pred eCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEe
Q 003911 662 DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 741 (787)
Q Consensus 662 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 741 (787)
+.+..|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEe
Confidence 999999999999999999998542 1368999999999999999999998 899999999999999999999999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccc-------cCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV-------HTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~-~~DiWS~ 785 (787)
|||+++.............+||+.|+|||++. +..++ ++|+||.
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSl 256 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWAL 256 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHH
T ss_pred echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHH
Confidence 99999887554433333468999999999997 35666 8999983
No 69
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.97 E-value=3.5e-32 Score=285.92 Aligned_cols=187 Identities=25% Similarity=0.407 Sum_probs=157.4
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
+.++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+++.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 4578999999999999999999865 789999999865432 34456789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 89 v~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 160 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKA 160 (294)
T ss_dssp EEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTT
T ss_pred EEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccc
Confidence 99999999999998542 368999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.............||+.|+|||++.+..++ ++|+||.
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 198 (294)
T 4eqm_A 161 LSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSI 198 (294)
T ss_dssp C-------------CCSSCCHHHHHTCCCCTTHHHHHH
T ss_pred cccccccccCccccCccccCHhHhcCCCCCchHhHHHH
Confidence 654433333446799999999999998888 8999983
No 70
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=1.9e-32 Score=292.67 Aligned_cols=204 Identities=40% Similarity=0.698 Sum_probs=175.3
Q ss_pred ceeeeHHHHHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeE
Q 003911 580 NMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH 659 (787)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 659 (787)
...++.+++....++|++.+.||+|+||.||+|+..+++.||||++..... .....++.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEE
Confidence 456788899999999999999999999999999887899999999976432 2233478999999999999999999999
Q ss_pred EEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEE
Q 003911 660 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 739 (787)
Q Consensus 660 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 739 (787)
+.+.+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+.+..+|+||||||+||++++++.+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999865332 234589999999999999999999983223999999999999999999999
Q ss_pred EeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 740 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 740 l~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+|||+++..............||+.|+|||++.+..++ ++||||.
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 221 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 221 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHH
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhH
Confidence 999999998765555555556799999999999988888 9999983
No 71
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=284.69 Aligned_cols=185 Identities=26% Similarity=0.451 Sum_probs=160.2
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|... +++.||+|++.. ......+.+.+|++++++++||||+++++++.+++..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 357999999999999999999875 689999998854 34556778999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 87 e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 87 EYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp ECCTTCBHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 99999999999854 23468999999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCce-------------eeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSI-------------ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
...... .....||+.|+|||++.+..++ ++||||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 208 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHH
Confidence 432211 1145799999999999999888 8999983
No 72
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.97 E-value=1e-31 Score=289.85 Aligned_cols=185 Identities=26% Similarity=0.379 Sum_probs=162.3
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc----hhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
+.++|++.+.||+|+||.||+|+.. +|+.||+|+++...... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4578999999999999999999876 69999999998754321 235789999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC----cEEEe
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 741 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~ 741 (787)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||++++++ .+||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 9999999999999999843 3468999999999999999999998 8999999999999998776 79999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|||+++...... .....+||+.|+|||++.+..++ ++|+||.
T Consensus 162 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 204 (361)
T 2yab_A 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204 (361)
T ss_dssp CCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred ecCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHH
Confidence 999998875533 22346799999999999998888 8999983
No 73
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=2.5e-32 Score=293.77 Aligned_cols=185 Identities=27% Similarity=0.431 Sum_probs=157.1
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 668 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++++... .....+.+.+|.++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999876 689999999986432 234556788999999998 69999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.
T Consensus 102 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999988542 468999999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......+||+.|+|||++.+..++ ++|+||.
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 210 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAM 210 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHH
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcc
Confidence 43322 223446899999999999998888 8999983
No 74
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=4.2e-32 Score=295.41 Aligned_cols=185 Identities=23% Similarity=0.402 Sum_probs=159.8
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 668 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.... ....+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357999999999999999999876 6889999999875433 33445688999999887 89999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.
T Consensus 131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999988542 468999999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......+||+.|+|||++.+..++ ++|+||.
T Consensus 203 ~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~Diwsl 239 (396)
T 4dc2_A 203 GLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 239 (396)
T ss_dssp CCCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred cccCC-CccccccCCcccCCchhhcCCCCChHHHHHHH
Confidence 43322 233457899999999999999998 8999983
No 75
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=6.9e-32 Score=293.04 Aligned_cols=186 Identities=23% Similarity=0.322 Sum_probs=160.9
Q ss_pred cCCCcccceeccccceEEEEEE------EeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC---CCccceEEeEEEe
Q 003911 592 TNNFSEENILGRGGFGTVYKGE------LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR---HRHLVALLGHCLD 662 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~ 662 (787)
.++|++.+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++++++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4679999999999999999993 447899999998653 3457888899998887 9999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC--------
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-------- 734 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------- 734 (787)
.+..++||||+++|+|.+++..........+++..++.|+.||+.||+|||+ .+||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999976554445679999999999999999999997 89999999999999998
Q ss_pred ---CCcEEEeecccceecCCC-CCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 735 ---DMRAKVADFGLVRLAPEG-KGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 735 ---~~~~kl~DFG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++.+||+|||+|+..... ........+||+.|||||++.+..++ ++||||.
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 271 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGV 271 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHH
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHH
Confidence 899999999999865422 22334456799999999999999888 8999983
No 76
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=8e-31 Score=292.09 Aligned_cols=308 Identities=15% Similarity=0.132 Sum_probs=239.0
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
.+++.|++++|++++. | ++.+++|++|+|++|+|++. + +.++++|++|+|++|++++++ ++.+++|++|+++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~l~---~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTKLD---VSQNPLLTYLNCA 135 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSCCC---CTTCTTCCEEECT
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCeec---CCCCCcCCEEECC
Confidence 6899999999999974 4 99999999999999999986 3 899999999999999999985 8999999999999
Q ss_pred CCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeeccCCCC
Q 003911 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGN 226 (787)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~~~~~ 226 (787)
+|++++ ++ ++.+++|++|++++|+..+.++ ++ .+++|++|++++|++++. | +.. ..++.|++.++...
T Consensus 136 ~N~l~~--l~--l~~l~~L~~L~l~~n~~~~~~~--~~--~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 136 RNTLTE--ID--VSHNTQLTELDCHLNKKITKLD--VT--PQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp TSCCSC--CC--CTTCTTCCEEECTTCSCCCCCC--CT--TCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCS
T ss_pred CCccce--ec--cccCCcCCEEECCCCCcccccc--cc--cCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCC
Confidence 999996 33 8899999999999997666663 44 899999999999999974 4 332 56777777655433
Q ss_pred CcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCC-------CCCEEEccCCcc
Q 003911 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLE-------SLKIVNMTNNLL 299 (787)
Q Consensus 227 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-------~L~~L~Ls~N~l 299 (787)
.. .++.+++|+.|+|++|++++. | +..+++|+.|++++|+|++..+..+.+++ +|+.|++++|++
T Consensus 205 ~~------~l~~l~~L~~L~Ls~N~l~~i-p-~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~ 276 (457)
T 3bz5_A 205 KL------DLNQNIQLTFLDCSSNKLTEI-D-VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQ 276 (457)
T ss_dssp CC------CCTTCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTT
T ss_pred ee------ccccCCCCCEEECcCCccccc-C-ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCcc
Confidence 22 378899999999999999995 4 88999999999999999987655555554 566677777776
Q ss_pred cccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccC
Q 003911 300 QGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQK 379 (787)
Q Consensus 300 ~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~ 379 (787)
.+.+| +..+.+|+.+++++|............+ ... .+...++|+.|++++
T Consensus 277 ~~~~~-~~~l~~L~~L~Ls~n~~l~~l~~~~~~L--------------------------~~L--~l~~~~~L~~L~L~~ 327 (457)
T 3bz5_A 277 LIYFQ-AEGCRKIKELDVTHNTQLYLLDCQAAGI--------------------------TEL--DLSQNPKLVYLYLNN 327 (457)
T ss_dssp CCEEE-CTTCTTCCCCCCTTCTTCCEEECTTCCC--------------------------SCC--CCTTCTTCCEEECTT
T ss_pred CCccc-ccccccCCEEECCCCcccceeccCCCcc--------------------------eEe--chhhcccCCEEECCC
Confidence 66666 4566788888988886432211000000 000 022336899999999
Q ss_pred CcccccCchhhcCCCCCCEEecccccccccCCccCc-------------CCCCCCeeeccCCcccccCCC
Q 003911 380 MNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLS-------------VLGALKELDVSNNQLYGKIPS 436 (787)
Q Consensus 380 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~-------------~l~~L~~L~Ls~N~l~g~iP~ 436 (787)
|++++. + ++.+++|+.|+|++|+|++ +| .+. .+..|+.+++++|+|+|.||.
T Consensus 328 N~l~~l-~--l~~l~~L~~L~l~~N~l~~-l~-~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 328 TELTEL-D--VSHNTKLKSLSCVNAHIQD-FS-SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp CCCSCC-C--CTTCTTCSEEECCSSCCCB-CT-TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCT
T ss_pred Cccccc-c--cccCCcCcEEECCCCCCCC-cc-ccccccccCCcEEecceeeecCccccccCcEEEEcCh
Confidence 999984 3 9999999999999999996 32 111 123456667777777777765
No 77
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=5.9e-31 Score=307.66 Aligned_cols=332 Identities=16% Similarity=0.157 Sum_probs=253.7
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.|+|++|+|++..|.+|.+|++|++|+|++|+|++.++ .|.+|++|++|+|++|+|+++++..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 479999999999998778899999999999999999999887 6999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCC----------------------------------------
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGP---------------------------------------- 186 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~---------------------------------------- 186 (787)
++|+++.+.+|..+..+++|++|++++|+|++..|..|..
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~ 235 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 235 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccc
Confidence 9999998778999999999999999999988766543310
Q ss_pred --------------------------------------------------------------------------------
Q 003911 187 -------------------------------------------------------------------------------- 186 (787)
Q Consensus 187 -------------------------------------------------------------------------------- 186 (787)
T Consensus 236 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 236 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp SSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEES
T ss_pred ccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccc
Confidence
Q ss_pred ---------CCCCCCcEEeccccccccCCCcCcc--------------------cccccceeeccCCCC-----------
Q 003911 187 ---------DEFPGLTILHLAFNQLIGGLPASFS--------------------GSQIQSLWVNGQNGN----------- 226 (787)
Q Consensus 187 ---------~~l~~L~~L~L~~N~l~~~~p~~~~--------------------~~~l~~L~~~~~~~~----------- 226 (787)
.....|+.|++.+|++.+..+..+. ...++.|++..+...
T Consensus 316 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 395 (635)
T 4g8a_A 316 VTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395 (635)
T ss_dssp CEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHS
T ss_pred cccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhh
Confidence 0001233333333333322211110 012222322222110
Q ss_pred -----------CcCCCCccccccCccCceEeccccccccCCC--CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEE
Q 003911 227 -----------AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 293 (787)
Q Consensus 227 -----------~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 293 (787)
+.....+..+..+++|+.++++.|.+....+ .+..+++|+.+++++|++++..|..+..+++|+.|+
T Consensus 396 ~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~ 475 (635)
T 4g8a_A 396 TISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 475 (635)
T ss_dssp CSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred hhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence 0011112345566777777777777766554 377788888888888988888888888889999999
Q ss_pred ccCCccc-ccCCC-CCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCc
Q 003911 294 MTNNLLQ-GPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGN 371 (787)
Q Consensus 294 Ls~N~l~-~~~p~-~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (787)
|++|++. +.+|. +..+.+|+.+++++|.+..++.. .+..+++
T Consensus 476 Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~------------------------------------~f~~l~~ 519 (635)
T 4g8a_A 476 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT------------------------------------AFNSLSS 519 (635)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT------------------------------------TTTTCTT
T ss_pred hhhcccccccCchhhhhccccCEEECCCCccCCcChH------------------------------------HHcCCCC
Confidence 9988754 34454 66777888888888876654322 2334568
Q ss_pred eEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCC-CCCCeeeccCCcccccCC
Q 003911 372 ITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVL-GALKELDVSNNQLYGKIP 435 (787)
Q Consensus 372 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~~L~~L~Ls~N~l~g~iP 435 (787)
|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..+..+ ++|++|+|++|++++.-.
T Consensus 520 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 520 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999999999999999999999999999999998 689999999999987543
No 78
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.97 E-value=9.9e-32 Score=290.69 Aligned_cols=186 Identities=26% Similarity=0.440 Sum_probs=163.5
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
.+.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34568999999999999999999875 68999999998766666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC---CcEEEeeccc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVADFGL 745 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~ 745 (787)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 9999999999988843 3468999999999999999999998 899999999999999864 4599999999
Q ss_pred ceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++...... ......||+.|+|||++.+..++ ++||||.
T Consensus 178 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 216 (362)
T 2bdw_A 178 AIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 216 (362)
T ss_dssp CBCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHH
T ss_pred ceEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHH
Confidence 98775433 22346799999999999998888 8999983
No 79
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97 E-value=8.3e-32 Score=285.68 Aligned_cols=182 Identities=27% Similarity=0.459 Sum_probs=160.9
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +|+.||+|++++... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357999999999999999999875 799999999976432 234457788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp ECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 999999999999854 2468999999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
... ....+||+.|+|||++.+..++ ++|+||.
T Consensus 157 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 189 (318)
T 1fot_A 157 PDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSF 189 (318)
T ss_dssp SSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHH
T ss_pred CCc----cccccCCccccCHhHhcCCCCCcccchhhh
Confidence 432 2346799999999999998888 8999983
No 80
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.4e-31 Score=309.57 Aligned_cols=310 Identities=15% Similarity=0.101 Sum_probs=256.6
Q ss_pred CCCCCcEEEeecCCCCCCCCC-CCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCE
Q 003911 90 NLTKLERLELQWNSISGPLPS-LNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQN 168 (787)
Q Consensus 90 ~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~ 168 (787)
.+++++.|++++|.++..++. |.++++|++|+|++|.|+++++..|+++++|++|+|++|.+++ ..|..|+++++|++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTV 127 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCC-CCHHHHcCCCCCCE
Confidence 478999999999999988884 7889999999999999999999999999999999999999997 55778899999999
Q ss_pred EeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeeccCCCCCcCCCCccccccCccCceEec
Q 003911 169 FSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWL 247 (787)
Q Consensus 169 L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L 247 (787)
|++++|.|++.++..|+ .+++|++|+|++|.+++..|..|.. .+|+.|++.++..... .++.+++|+.|++
T Consensus 128 L~L~~n~l~~l~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------~~~~l~~L~~L~l 199 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFH--NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV------DLSLIPSLFHANV 199 (597)
T ss_dssp EECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC------CGGGCTTCSEEEC
T ss_pred EEeeCCCCCCCCHHHhc--cCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc------Chhhhhhhhhhhc
Confidence 99999999988887776 8999999999999999998888865 5677777765433221 2556788888888
Q ss_pred cccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCC
Q 003911 248 HSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPG 327 (787)
Q Consensus 248 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~ 327 (787)
++|.+++. ...++|+.|++++|.++. +|..+ .++|+.|+|++|.+++. +.+..+..|+.+++++|.+...+.
T Consensus 200 ~~n~l~~l----~~~~~L~~L~ls~n~l~~-~~~~~--~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~ 271 (597)
T 3oja_B 200 SYNLLSTL----AIPIAVEELDASHNSINV-VRGPV--NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMY 271 (597)
T ss_dssp CSSCCSEE----ECCTTCSEEECCSSCCCE-EECSC--CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEES
T ss_pred ccCccccc----cCCchhheeeccCCcccc-ccccc--CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCH
Confidence 88888753 334678899999999884 44333 26899999999998874 567777788888888887654321
Q ss_pred CCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEeccccccc
Q 003911 328 ACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLS 407 (787)
Q Consensus 328 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 407 (787)
..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++
T Consensus 272 ------------------------------------~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 272 ------------------------------------HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp ------------------------------------GGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC
T ss_pred ------------------------------------HHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC
Confidence 123345689999999999997 5777888999999999999999
Q ss_pred ccCCccCcCCCCCCeeeccCCcccccCCC-CCCCceeecCCCCCCCCC
Q 003911 408 GMIPEGLSVLGALKELDVSNNQLYGKIPS-FKSNAIVNTDGNPDIGKE 454 (787)
Q Consensus 408 g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~-~~~~~~~~~~gn~~~~~~ 454 (787)
.+|..+..+++|++|+|++|++++..+. +..+..+.+.||++.|..
T Consensus 315 -~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 315 -HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp -CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHH
T ss_pred -ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCChh
Confidence 7898999999999999999999876443 777888999999998854
No 81
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.9e-31 Score=283.69 Aligned_cols=183 Identities=23% Similarity=0.341 Sum_probs=161.4
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|... +++.||+|++... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 4578999999999999999999876 6889999998752 34456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC--CCcEEEeecccce
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR 747 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~ 747 (787)
|||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 80 FEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp ECCCCCCBHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEeCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence 999999999998843 22468999999999999999999998 89999999999999987 7899999999998
Q ss_pred ecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
...... ......||+.|+|||++.+..++ ++|+||.
T Consensus 153 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 189 (321)
T 1tki_A 153 QLKPGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189 (321)
T ss_dssp ECCTTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHH
T ss_pred ECCCCC--ccccccCChhhcCcHHhcCCCCCchhhHHHH
Confidence 875443 33446799999999999998888 8999983
No 82
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.97 E-value=8.8e-32 Score=297.97 Aligned_cols=187 Identities=24% Similarity=0.354 Sum_probs=163.1
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
.+.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 35678999999999999999999765 78999999998766556667789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEC---CCCcEEEeeccc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGL 745 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DFG~ 745 (787)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ +++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 9999999999998854 2468999999999999999999998 8999999999999998 567899999999
Q ss_pred ceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++....... ......||+.|+|||++.+..++ ++||||.
T Consensus 160 a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSl 199 (444)
T 3soa_A 160 AIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 199 (444)
T ss_dssp CBCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred eEEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHH
Confidence 987654432 22346799999999999998888 8999983
No 83
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97 E-value=7.6e-32 Score=288.90 Aligned_cols=186 Identities=27% Similarity=0.484 Sum_probs=161.2
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 667 (787)
..++|++.+.||+|+||.||+|+.+ +++.||||+++.... .....+.+..|.++++.+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3578999999999999999999876 689999999986432 233456788999999987 8999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 95 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999998542 368999999999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
....... .....+||+.|+|||++.+..++ ++|+||.
T Consensus 167 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 204 (345)
T 1xjd_A 167 ENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSF 204 (345)
T ss_dssp CCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred hcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHH
Confidence 6533322 23446899999999999998888 8999983
No 84
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.97 E-value=8e-32 Score=285.10 Aligned_cols=188 Identities=30% Similarity=0.508 Sum_probs=154.4
Q ss_pred hcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
..++|++.+.||+|+||.||+|+. +++.||||++..........+++.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 346899999999999999999987 5899999999876656666788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++.
T Consensus 114 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp ECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred ecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 99999999999854221 1248899999999999999999997 77 99999999999999999999999999986
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... .......||+.|+|||++.+..++ ++||||.
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 225 (309)
T 3p86_A 189 KASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHH
T ss_pred ccccc-cccccCCCCccccChhhhcCCCCCchhhHHHH
Confidence 54332 122346799999999999998888 8999983
No 85
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.97 E-value=1.2e-31 Score=288.00 Aligned_cols=184 Identities=24% Similarity=0.408 Sum_probs=161.2
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 669 (787)
++|++.+.||+|+||.||+|+.. +++.||+|++++.... ....+.+.+|.++++++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999876 6899999999875433 34556788999999998 899999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999988542 368999999999999999999998 89999999999999999999999999999864
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... ......+||+.|+|||++.+..++ ++|+||.
T Consensus 161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 196 (345)
T 3a8x_A 161 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 196 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred cCCC-CcccccCCCccccCccccCCCCCChHHhHHHH
Confidence 3322 223446899999999999998888 8999983
No 86
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97 E-value=1.4e-31 Score=288.58 Aligned_cols=190 Identities=23% Similarity=0.373 Sum_probs=162.0
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc---chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS---GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
+.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3457999999999999999999875 7899999999753221 22467899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc---EEEeec
Q 003911 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADF 743 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DF 743 (787)
|+||||+++++|.+++...... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +||+||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEeCCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecC
Confidence 9999999999999888654332 2468999999999999999999998 89999999999999986554 999999
Q ss_pred ccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+++...... ......+||+.|+|||++.+..++ ++||||.
T Consensus 178 g~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 219 (351)
T 3c0i_A 178 GVAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGC 219 (351)
T ss_dssp TTCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred cceeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHH
Confidence 9998875533 223346799999999999998888 8999983
No 87
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.97 E-value=1.5e-31 Score=286.47 Aligned_cols=189 Identities=28% Similarity=0.425 Sum_probs=157.6
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC-----
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----- 664 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 664 (787)
+.++|++.+.||+|+||.||+|+.. +++.||||+++... .....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 3467999999999999999999886 79999999997643 3445678999999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEEecCCCCHHHHHHhhhhcCCCC
Q 003911 665 ----------------------------------------------------EKLLVFEYMPQGTLSRHIFNWAEEGLKP 692 (787)
Q Consensus 665 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~ 692 (787)
..++||||+++|+|.+++.... ....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~ 160 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLED 160 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGG
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--Cccc
Confidence 2799999999999999986532 2234
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCCCCC-----------ceeeeec
Q 003911 693 LEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG-----------SIETRIA 761 (787)
Q Consensus 693 l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-----------~~~~~~~ 761 (787)
.++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....... .......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 5677889999999999999998 8999999999999999999999999999988765421 1123356
Q ss_pred cccCcccccccccCCcC-cceeecC
Q 003911 762 GTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 762 gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
||+.|+|||++.+..++ ++|+||.
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~sl 262 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSL 262 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHH
T ss_pred CCcCccChHHhcCCCCcchhhHHHH
Confidence 99999999999998888 8999983
No 88
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.97 E-value=1.4e-31 Score=283.69 Aligned_cols=187 Identities=27% Similarity=0.397 Sum_probs=157.3
Q ss_pred hhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.+.++|++.+.||+|+||.||+|+..+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 35578999999999999999999988899999999976544445567889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||++ ++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 98 ~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 169 (311)
T 3niz_A 98 FEFME-KDLKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAF 169 (311)
T ss_dssp EECCS-EEHHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred EcCCC-CCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceec
Confidence 99997 588877743 23468999999999999999999998 89999999999999999999999999999877
Q ss_pred CCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
..... ......||+.|+|||++.+ ..++ ++|+||.
T Consensus 170 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 206 (311)
T 3niz_A 170 GIPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206 (311)
T ss_dssp TSCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHH
T ss_pred CCCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHH
Confidence 54332 2234578999999999977 4566 8999983
No 89
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.5e-31 Score=281.22 Aligned_cols=251 Identities=20% Similarity=0.278 Sum_probs=183.1
Q ss_pred CCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCC-CCCCCCCcEEEcccccCCcCC--Cc
Q 003911 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPS-LNGLASLEVVMLSNNQFTSVP--SD 133 (787)
Q Consensus 57 C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~--~~ 133 (787)
|.|.+|.|+. ++++ .+|..+. ++|++|+|++|+|+..++. |.++++|++|+|++|+++.+. +.
T Consensus 7 C~~~~l~c~~-----------~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 72 (306)
T 2z66_A 7 CSGTEIRCNS-----------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQ 72 (306)
T ss_dssp EETTEEECCS-----------SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEH
T ss_pred eCCCEEEcCC-----------CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccc
Confidence 6788777754 3455 5666554 6899999999999977764 789999999999999998653 45
Q ss_pred cccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCC-CCCCCCCCCCCcEEeccccccccCCCcCccc
Q 003911 134 FFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQLIGGLPASFSG 212 (787)
Q Consensus 134 ~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 212 (787)
.+..+++|++|+|++|.+. .+|..+..+++|++|++++|++++..+ ..+. .+++|++|++++|++.+..|..+.
T Consensus 73 ~~~~~~~L~~L~Ls~n~i~--~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~- 147 (306)
T 2z66_A 73 SDFGTTSLKYLDLSFNGVI--TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL--SLRNLIYLDISHTHTRVAFNGIFN- 147 (306)
T ss_dssp HHHSCSCCCEEECCSCSEE--EEEEEEETCTTCCEEECTTSEEESSTTTTTTT--TCTTCCEEECTTSCCEECSTTTTT-
T ss_pred ccccccccCEEECCCCccc--cChhhcCCCCCCCEEECCCCcccccccchhhh--hccCCCEEECCCCcCCccchhhcc-
Confidence 5677889999999999887 577778888888888888888887665 4554 777888888888887766665543
Q ss_pred ccccceeeccCCCCCcCCCCccccccCccCceEecccccccc--CCCCCCCCCCCCEEecCCCcccccCCccccCCCCCC
Q 003911 213 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSG--PLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLK 290 (787)
Q Consensus 213 ~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 290 (787)
++++|++|+|++|.+++ .+..+..+++|++|+|++|+|++..|..+..+++|+
T Consensus 148 -------------------------~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 148 -------------------------GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp -------------------------TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred -------------------------cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 66777777777777765 333566777777777777777766667777777777
Q ss_pred EEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCC
Q 003911 291 IVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKG 370 (787)
Q Consensus 291 ~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (787)
+|+|++|++++.
T Consensus 203 ~L~L~~N~l~~~-------------------------------------------------------------------- 214 (306)
T 2z66_A 203 VLNMSHNNFFSL-------------------------------------------------------------------- 214 (306)
T ss_dssp EEECTTSCCSBC--------------------------------------------------------------------
T ss_pred EEECCCCccCcc--------------------------------------------------------------------
Confidence 777777766543
Q ss_pred ceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCC-CCCeeeccCCcccccC
Q 003911 371 NITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLG-ALKELDVSNNQLYGKI 434 (787)
Q Consensus 371 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~-~L~~L~Ls~N~l~g~i 434 (787)
.+..+..+++|+.|+|++|++++..|..+..++ +|++|+|++|++++..
T Consensus 215 ---------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 215 ---------------DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp ---------------CSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred ---------------ChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 333456667777777777777777777777763 7777777777777653
No 90
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=289.73 Aligned_cols=248 Identities=21% Similarity=0.295 Sum_probs=198.2
Q ss_pred EEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCC
Q 003911 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (787)
Q Consensus 71 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 149 (787)
..++.++++++ .+|..+. ++++.|+|++|+|++..+ .|.++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 35566667777 7888776 789999999999999776 7999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcC
Q 003911 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (787)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~ 229 (787)
+++. ..+..|..+++|++|++++|.|+...+..|. .+++|++|+|++|+..+.++..
T Consensus 123 ~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~l~~~~~l~~i~~~-------------------- 179 (440)
T 3zyj_A 123 RLTT-IPNGAFVYLSKLKELWLRNNPIESIPSYAFN--RIPSLRRLDLGELKRLSYISEG-------------------- 179 (440)
T ss_dssp CCSS-CCTTTSCSCSSCCEEECCSCCCCEECTTTTT--TCTTCCEEECCCCTTCCEECTT--------------------
T ss_pred cCCe-eCHhHhhccccCceeeCCCCcccccCHHHhh--hCcccCEeCCCCCCCcceeCcc--------------------
Confidence 9995 3345788999999999999999988877776 8899999999885544344432
Q ss_pred CCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCc
Q 003911 230 GGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRS 309 (787)
Q Consensus 230 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 309 (787)
.|.++++|++|+|++|+++. +|.+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 180 -----~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----- 248 (440)
T 3zyj_A 180 -----AFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER----- 248 (440)
T ss_dssp -----TTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT-----
T ss_pred -----hhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh-----
Confidence 13478888888888888884 4567778888888888888887778888888888888887777765433
Q ss_pred eeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchh
Q 003911 310 VSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPE 389 (787)
Q Consensus 310 ~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~ 389 (787)
..
T Consensus 249 ------------------------------------------------------------------------------~~ 250 (440)
T 3zyj_A 249 ------------------------------------------------------------------------------NA 250 (440)
T ss_dssp ------------------------------------------------------------------------------TS
T ss_pred ------------------------------------------------------------------------------hh
Confidence 34
Q ss_pred hcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCccccc
Q 003911 390 FASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 433 (787)
Q Consensus 390 ~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ 433 (787)
|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 251 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 251 FDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp STTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred hcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 66677788888888888866666777788888888888877653
No 91
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=289.97 Aligned_cols=183 Identities=25% Similarity=0.421 Sum_probs=160.0
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57999999999999999999876 688999999976432 2345678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+...
T Consensus 95 e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp CCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999998843 3468999999999999999999998 899999999999999999999999999998775
Q ss_pred CCCCceeeeeccccCccccccccc---CCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVH---TRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~-~~DiWS~ 785 (787)
... .....+||+.|+|||++.+ ..++ ++|+||.
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSl 203 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSL 203 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHH
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeech
Confidence 432 2344679999999999974 3466 8999983
No 92
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.97 E-value=2.9e-31 Score=278.75 Aligned_cols=184 Identities=24% Similarity=0.382 Sum_probs=159.2
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
++|++.+.||+|+||+||+|+.. +++.||||++..........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999875 68999999998765555566789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
|+++ ++.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9975 66665533 23568999999999999999999998 8999999999999999999999999999987754
Q ss_pred CCCceeeeeccccCcccccccccCC-cC-cceeecC
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVHTR-WS-SCSYWAG 785 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~DiWS~ 785 (787)
... ......||+.|+|||++.+.. ++ ++||||.
T Consensus 154 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 188 (292)
T 3o0g_A 154 PVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188 (292)
T ss_dssp CCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHH
T ss_pred ccc-cccCCccccCCcChHHHcCCCCcCchHHHHHH
Confidence 332 233457899999999998765 56 8999983
No 93
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=1.9e-31 Score=289.56 Aligned_cols=190 Identities=26% Similarity=0.449 Sum_probs=161.3
Q ss_pred cCCCcccceeccccceEEEEEEEe--------CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEe
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 662 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 662 (787)
.++|++.+.||+|+||.||+|+.. ++..||||+++.. ......+++.+|+++++++ +||||+++++++.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 467999999999999999999763 3567999999764 3445567899999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 731 (787)
.+..|+||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ ++|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEE
Confidence 99999999999999999999653211 12358899999999999999999998 89999999999999
Q ss_pred ECCCCcEEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 732 LGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 732 l~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++.++.+||+|||+++........ ......||+.|+|||++.+..++ ++|+||.
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvwsl 291 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHH
Confidence 999999999999999876543321 12234578899999999999888 8999983
No 94
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=9.5e-31 Score=291.23 Aligned_cols=323 Identities=20% Similarity=0.215 Sum_probs=176.7
Q ss_pred CEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCC---------------------------------
Q 003911 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGL--------------------------------- 114 (787)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l--------------------------------- 114 (787)
++++|++++|++ |.+|++|+++++|++|+|++|+++|.+| +++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~ 90 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELP 90 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCc
Confidence 455555555555 4555555555555555555555554433 34443
Q ss_pred CCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcE
Q 003911 115 ASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTI 194 (787)
Q Consensus 115 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~ 194 (787)
++|++|+|++|++++++. .+++|++|++++|++++ +|.. .++|++|++++|++++ +| .|+ .+++|++
T Consensus 91 ~~L~~L~l~~n~l~~lp~----~~~~L~~L~l~~n~l~~--l~~~---~~~L~~L~L~~n~l~~-lp-~~~--~l~~L~~ 157 (454)
T 1jl5_A 91 PHLESLVASCNSLTELPE----LPQSLKSLLVDNNNLKA--LSDL---PPLLEYLGVSNNQLEK-LP-ELQ--NSSFLKI 157 (454)
T ss_dssp TTCSEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC--CCSC---CTTCCEEECCSSCCSS-CC-CCT--TCTTCCE
T ss_pred CCCCEEEccCCcCCcccc----ccCCCcEEECCCCccCc--ccCC---CCCCCEEECcCCCCCC-Cc-ccC--CCCCCCE
Confidence 345555555555555442 13566666666666653 3321 1578888888888876 55 354 7888888
Q ss_pred EeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCc
Q 003911 195 LHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNF 274 (787)
Q Consensus 195 L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~ 274 (787)
|++++|++++ +|..+ .+++.|++.++.. .+.+ .++++++|++|++++|++++.+... ++|++|++++|+
T Consensus 158 L~l~~N~l~~-lp~~~--~~L~~L~L~~n~l----~~l~-~~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n~ 226 (454)
T 1jl5_A 158 IDVDNNSLKK-LPDLP--PSLEFIAAGNNQL----EELP-ELQNLPFLTAIYADNNSLKKLPDLP---LSLESIVAGNNI 226 (454)
T ss_dssp EECCSSCCSC-CCCCC--TTCCEEECCSSCC----SSCC-CCTTCTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSC
T ss_pred EECCCCcCcc-cCCCc--ccccEEECcCCcC----CcCc-cccCCCCCCEEECCCCcCCcCCCCc---CcccEEECcCCc
Confidence 8888888875 55544 3677777765432 2233 4778888888888888888643322 578888888888
Q ss_pred ccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccC
Q 003911 275 FTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWK 354 (787)
Q Consensus 275 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 354 (787)
++ .+|. +..+++|++|++++|++++.++.. .+|+.+++++|.+..+|... ..+.. ...
T Consensus 227 l~-~lp~-~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~N~l~~l~~~~-~~L~~----------------L~l 284 (454)
T 1jl5_A 227 LE-ELPE-LQNLPFLTTIYADNNLLKTLPDLP---PSLEALNVRDNYLTDLPELP-QSLTF----------------LDV 284 (454)
T ss_dssp CS-SCCC-CTTCTTCCEEECCSSCCSSCCSCC---TTCCEEECCSSCCSCCCCCC-TTCCE----------------EEC
T ss_pred CC-cccc-cCCCCCCCEEECCCCcCCcccccc---cccCEEECCCCcccccCccc-CcCCE----------------EEC
Confidence 88 6774 788888888888888888744322 45666777777766654321 10000 000
Q ss_pred CCCCCCCccccccCCCceEEEEccCCcccccCchhhcCC-CCCCEEecccccccccCCccCcCCCCCCeeeccCCccccc
Q 003911 355 GNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASF-KSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 433 (787)
Q Consensus 355 ~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ 433 (787)
...... +.....++|+.|++++|++++. ..+ ++|+.|+|++|++++ +|.. +++|++|++++|++++
T Consensus 285 s~N~l~---~l~~~~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~- 351 (454)
T 1jl5_A 285 SENIFS---GLSELPPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE- 351 (454)
T ss_dssp CSSCCS---EESCCCTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-
T ss_pred cCCccC---cccCcCCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-
Confidence 000000 0001113566666666666541 122 366777777777764 5543 4667777777777764
Q ss_pred CCC-CCCCceeecCCCCCC
Q 003911 434 IPS-FKSNAIVNTDGNPDI 451 (787)
Q Consensus 434 iP~-~~~~~~~~~~gn~~~ 451 (787)
+|. +..+..+.+.+|+..
T Consensus 352 lp~~l~~L~~L~L~~N~l~ 370 (454)
T 1jl5_A 352 VPELPQNLKQLHVEYNPLR 370 (454)
T ss_dssp CCCCCTTCCEEECCSSCCS
T ss_pred ccchhhhccEEECCCCCCC
Confidence 333 344556666666543
No 95
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97 E-value=1.6e-31 Score=287.27 Aligned_cols=181 Identities=27% Similarity=0.394 Sum_probs=160.9
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
++|++.+.||+|+||.||+|+.. +|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57999999999999999999876 799999999976432 2345678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 121 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999998542 358999999999999999999998 899999999999999999999999999998764
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.. ....+||+.|+|||++.+..++ ++|+||.
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 224 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWAL 224 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecc
Confidence 43 2346799999999999998888 8999983
No 96
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97 E-value=1.5e-31 Score=287.61 Aligned_cols=185 Identities=26% Similarity=0.371 Sum_probs=160.9
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 668 (787)
.++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+..|.++++.+ +||+|+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 468999999999999999999876 588999999986432 234456788999999988 79999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 99 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999998542 368999999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......+||+.|+|||++.+..++ ++|+||.
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 207 (353)
T 2i0e_A 171 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAF 207 (353)
T ss_dssp CCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHH
T ss_pred cccCC-cccccccCCccccChhhhcCCCcCCcccccch
Confidence 43322 223446799999999999998888 8999983
No 97
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=7.6e-32 Score=287.29 Aligned_cols=196 Identities=39% Similarity=0.749 Sum_probs=167.3
Q ss_pred eHHHHHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC
Q 003911 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 663 (787)
Q Consensus 584 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 663 (787)
+..++....++|++.+.||+|+||.||+|+.++++.||||++... .....+++.+|++++++++||||+++++++.+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 334455677899999999999999999999888999999988753 334567899999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
+..++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CeEEEEEEcCCCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeec
Confidence 999999999999999998854221 12358999999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCCC-ceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 744 GLVRLAPEGKG-SIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+++....... .......||+.|+|||++.+..++ ++||||.
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 227 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSF 227 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHH
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhH
Confidence 99987543322 222345689999999999888888 8999983
No 98
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.97 E-value=5e-31 Score=281.34 Aligned_cols=185 Identities=25% Similarity=0.387 Sum_probs=161.3
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc----hhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
+.++|++.+.||+|+||.||+|... +++.||+|++....... ...+++.+|++++++++||||+++++++.+...
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3457999999999999999999876 68999999997643321 246789999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC----cEEEe
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 741 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~ 741 (787)
.++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp EEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 9999999999999999843 3468999999999999999999998 8999999999999999877 89999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|||+++...... ......||+.|+|||++.+..++ ++|+||.
T Consensus 161 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 203 (326)
T 2y0a_A 161 DFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 203 (326)
T ss_dssp CCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHH
T ss_pred ECCCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHH
Confidence 999998775432 22345799999999999988888 8999983
No 99
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.4e-30 Score=274.73 Aligned_cols=278 Identities=19% Similarity=0.266 Sum_probs=228.0
Q ss_pred CCcccEEEcCC----------CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccc
Q 003911 57 CKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNN 125 (787)
Q Consensus 57 C~w~gv~C~~~----------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N 125 (787)
|.|..+.|... ..++.|++++|++++..+..|+++++|++|+|++|+|++..| .|.++++|++|+|++|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 78999999642 468999999999998777799999999999999999999866 7999999999999999
Q ss_pred cCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecc--cCCCCCCCCCCCCCcEEeccccccc
Q 003911 126 QFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITG--QIPSFFGPDEFPGLTILHLAFNQLI 203 (787)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~~~l~~L~~L~L~~N~l~ 203 (787)
+++.++...+ ++|++|++++|+++. ..+..+.++++|+.|++++|.++. ..+..+. .+++|++|++++|+++
T Consensus 111 ~l~~l~~~~~---~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 111 QLKELPEKMP---KTLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ--GMKKLSYIRIADTNIT 184 (330)
T ss_dssp CCSBCCSSCC---TTCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG--GCTTCCEEECCSSCCC
T ss_pred cCCccChhhc---ccccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhcc--CCCCcCEEECCCCccc
Confidence 9999887755 799999999999995 445679999999999999999964 6777776 8999999999999998
Q ss_pred cCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCcccccCCcc
Q 003911 204 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 282 (787)
Q Consensus 204 ~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~ 282 (787)
. +|..+ .++|++|+|++|++++.++ .+..+++|+.|+|++|++++..+..
T Consensus 185 ~-l~~~~----------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 235 (330)
T 1xku_A 185 T-IPQGL----------------------------PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGS 235 (330)
T ss_dssp S-CCSSC----------------------------CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTT
T ss_pred c-CCccc----------------------------cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhh
Confidence 4 55443 2688899999999988765 4888899999999999998777778
Q ss_pred ccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCc
Q 003911 283 LVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW 362 (787)
Q Consensus 283 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (787)
+..+++|++|+|++|+++..+..+..
T Consensus 236 ~~~l~~L~~L~L~~N~l~~lp~~l~~------------------------------------------------------ 261 (330)
T 1xku_A 236 LANTPHLRELHLNNNKLVKVPGGLAD------------------------------------------------------ 261 (330)
T ss_dssp GGGSTTCCEEECCSSCCSSCCTTTTT------------------------------------------------------
T ss_pred ccCCCCCCEEECCCCcCccCChhhcc------------------------------------------------------
Confidence 88899999999999988844433322
Q ss_pred cccccCCCceEEEEccCCcccccCchhhcC------CCCCCEEecccccccc--cCCccCcCCCCCCeeeccCCc
Q 003911 363 IGVTCTKGNITVINFQKMNLTGTISPEFAS------FKSLQRLILADNNLSG--MIPEGLSVLGALKELDVSNNQ 429 (787)
Q Consensus 363 ~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~------l~~L~~L~Ls~N~l~g--~ip~~l~~l~~L~~L~Ls~N~ 429 (787)
.++|+.|++++|++++..+..|.. .+.|+.|+|++|.+.. ..|..|..+..|+.++|++|+
T Consensus 262 ------l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 ------HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp ------CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ------CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 236777777777777766666643 3678889999998863 567788889999999999885
No 100
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.1e-30 Score=288.32 Aligned_cols=248 Identities=23% Similarity=0.274 Sum_probs=199.9
Q ss_pred EEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCC
Q 003911 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP 150 (787)
Q Consensus 72 ~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 150 (787)
.++.++.+++ .+|..+. ++|++|+|++|+|++..+ .|.++++|++|+|++|+|+++++..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 3445555666 6777665 689999999999999877 79999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCC
Q 003911 151 FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLG 230 (787)
Q Consensus 151 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~ 230 (787)
++. ..+..|..+++|++|++++|+|+...+..|. .+++|++|+|++|+..+.+|..
T Consensus 135 l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~~~~l~~i~~~--------------------- 190 (452)
T 3zyi_A 135 LTV-IPSGAFEYLSKLRELWLRNNPIESIPSYAFN--RVPSLMRLDLGELKKLEYISEG--------------------- 190 (452)
T ss_dssp CSB-CCTTTSSSCTTCCEEECCSCCCCEECTTTTT--TCTTCCEEECCCCTTCCEECTT---------------------
T ss_pred CCc-cChhhhcccCCCCEEECCCCCcceeCHhHHh--cCCcccEEeCCCCCCccccChh---------------------
Confidence 995 3345688899999999999999988777776 8999999999985544444432
Q ss_pred CCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCce
Q 003911 231 GGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSV 310 (787)
Q Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 310 (787)
.|.++++|++|+|++|++++. |.+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+
T Consensus 191 ----~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~------ 259 (452)
T 3zyi_A 191 ----AFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIER------ 259 (452)
T ss_dssp ----TTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECT------
T ss_pred ----hccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECH------
Confidence 134788899999999988865 578888888888888888888888888888888888888887765433
Q ss_pred eeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhh
Q 003911 311 SLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEF 390 (787)
Q Consensus 311 ~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~ 390 (787)
..|
T Consensus 260 -----------------------------------------------------------------------------~~~ 262 (452)
T 3zyi_A 260 -----------------------------------------------------------------------------NAF 262 (452)
T ss_dssp -----------------------------------------------------------------------------TTT
T ss_pred -----------------------------------------------------------------------------HHh
Confidence 346
Q ss_pred cCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccC
Q 003911 391 ASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKI 434 (787)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 434 (787)
..+++|+.|+|++|+|++..+..+..+++|++|+|++|++....
T Consensus 263 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 263 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred cCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 67778888888888888666667788888888888888876543
No 101
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=6.6e-31 Score=279.72 Aligned_cols=179 Identities=25% Similarity=0.405 Sum_probs=158.4
Q ss_pred CcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEEec
Q 003911 595 FSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYM 673 (787)
Q Consensus 595 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 673 (787)
|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 124 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence 677789999999999999876 79999999997633 334577899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCCCC
Q 003911 674 PQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGK 753 (787)
Q Consensus 674 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 753 (787)
++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 195 (321)
T 2c30_A 125 QGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195 (321)
T ss_dssp CSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc
Confidence 99999998732 368999999999999999999998 899999999999999999999999999998775433
Q ss_pred CceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 754 GSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 754 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
. ......||+.|+|||++.+..++ ++|+||.
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~sl 227 (321)
T 2c30_A 196 P-KRKSLVGTPYWMAPEVISRSLYATEVDIWSL 227 (321)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred c-ccccccCCccccCHhhhcCCCCCchhhHHHH
Confidence 2 22346799999999999998888 8999983
No 102
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=3.4e-31 Score=274.58 Aligned_cols=184 Identities=29% Similarity=0.441 Sum_probs=161.3
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
.++|++.+.||+|+||.||+|+..++..||+|+++.... ..+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 467999999999999999999988888999999976432 34678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
|+++++|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.++....
T Consensus 84 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 84 YISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred ccCCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 99999999998653 2358999999999999999999998 8999999999999999999999999999987755
Q ss_pred CCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..........||+.|+|||++.+..++ ++|+||.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 191 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHH
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHH
Confidence 443333334567789999999988888 9999983
No 103
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=4e-31 Score=298.34 Aligned_cols=186 Identities=34% Similarity=0.540 Sum_probs=162.8
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 799999999976432 233456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++|+|.+++... +...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+..
T Consensus 263 mEy~~gg~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 9999999999988542 23458999999999999999999998 89999999999999999999999999999887
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... .....+||+.|+|||++.+..++ ++|+||.
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSL 371 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHH
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHH
Confidence 5443 23346899999999999998888 8999983
No 104
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=2.3e-31 Score=283.99 Aligned_cols=185 Identities=26% Similarity=0.461 Sum_probs=149.7
Q ss_pred cCCCcccceeccccceEEEEEEE----eCCcEEEEEEeeccccc--chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVIS--GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
.++|++.+.||+|+||.||+|+. .+++.||+|+++..... ......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35799999999999999999987 47899999999764322 2345668899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 745 (787)
.|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 99999999999999988541 368899999999999999999998 8999999999999999999999999999
Q ss_pred ceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++...... .......||+.|+|||++.+..++ ++|+||.
T Consensus 168 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 207 (327)
T 3a62_A 168 CKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSL 207 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHH
T ss_pred ccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhH
Confidence 97653322 122345799999999999988888 8999983
No 105
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=1.5e-31 Score=277.43 Aligned_cols=183 Identities=31% Similarity=0.498 Sum_probs=159.7
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEEe
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 672 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 672 (787)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 57999999999999999999988899999999976432 346799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCCC
Q 003911 673 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 752 (787)
Q Consensus 673 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 752 (787)
+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 87 MEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 999999999854 23468999999999999999999998 89999999999999999999999999999866443
Q ss_pred CCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 753 KGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 753 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.........||+.|+|||++.+..++ ++|+||.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 193 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 193 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHH
Confidence 22222334567889999999988888 8999983
No 106
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=1.2e-29 Score=282.32 Aligned_cols=309 Identities=23% Similarity=0.278 Sum_probs=190.0
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
.+++.|++++|.+++ +|+. +++|++|++++|++++.+.. .++|++|+|++|+++++| .|+++++|++|+++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~---~~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDL---PPLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVD 161 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSC---CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCC---CCCCCEEECcCCCCCCCc--ccCCCCCCCEEECC
Confidence 468888888888886 6653 37788888888888864331 168888888888888876 38888889999998
Q ss_pred CCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCC
Q 003911 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (787)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~ 227 (787)
+|++++ +|..+ .+|++|++++|++++ +| .++ .+++|++|++++|++++ +|... .+++.|++.++...
T Consensus 162 ~N~l~~--lp~~~---~~L~~L~L~~n~l~~-l~-~~~--~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 162 NNSLKK--LPDLP---PSLEFIAAGNNQLEE-LP-ELQ--NLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILE- 228 (454)
T ss_dssp SSCCSC--CCCCC---TTCCEEECCSSCCSS-CC-CCT--TCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCS-
T ss_pred CCcCcc--cCCCc---ccccEEECcCCcCCc-Cc-ccc--CCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCC-
Confidence 888884 56543 488888898888887 45 454 78889999999998885 45433 36777777654332
Q ss_pred cCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCC
Q 003911 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFD 307 (787)
Q Consensus 228 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 307 (787)
..| .++.+++|++|++++|++++.++. +++|+.|++++|++++ +|.. +++|++|++++|++++.+. +.
T Consensus 229 ---~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~-~~ 296 (454)
T 1jl5_A 229 ---ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSE-LP 296 (454)
T ss_dssp ---SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESC-CC
T ss_pred ---ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccC-cC
Confidence 333 377888888888888888875432 3788888888888884 6654 3788888888888887432 11
Q ss_pred CceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCc
Q 003911 308 RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTIS 387 (787)
Q Consensus 308 ~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p 387 (787)
.+|+.+++++|.+..++.. ...+. .......... +.....++|+.|++++|+++ .+|
T Consensus 297 --~~L~~L~l~~N~l~~i~~~-~~~L~----------------~L~Ls~N~l~---~lp~~~~~L~~L~L~~N~l~-~lp 353 (454)
T 1jl5_A 297 --PNLYYLNASSNEIRSLCDL-PPSLE----------------ELNVSNNKLI---ELPALPPRLERLIASFNHLA-EVP 353 (454)
T ss_dssp --TTCCEEECCSSCCSEECCC-CTTCC----------------EEECCSSCCS---CCCCCCTTCCEEECCSSCCS-CCC
T ss_pred --CcCCEEECcCCcCCcccCC-cCcCC----------------EEECCCCccc---cccccCCcCCEEECCCCccc-ccc
Confidence 3456666777765543211 00000 0000000000 01111245666666666666 344
Q ss_pred hhhcCCCCCCEEecccccccc--cCCccCcCC-------------CCCCeeeccCCcccc--cCCC
Q 003911 388 PEFASFKSLQRLILADNNLSG--MIPEGLSVL-------------GALKELDVSNNQLYG--KIPS 436 (787)
Q Consensus 388 ~~~~~l~~L~~L~Ls~N~l~g--~ip~~l~~l-------------~~L~~L~Ls~N~l~g--~iP~ 436 (787)
. .+++|++|+|++|++++ .+|.++..+ ++|++||+++|+++| .+|.
T Consensus 354 ~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 354 E---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp C---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------------
T ss_pred c---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh
Confidence 4 35666666666666666 566666555 566666666666665 4553
No 107
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=3.4e-31 Score=282.11 Aligned_cols=186 Identities=26% Similarity=0.430 Sum_probs=157.7
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 4578999999999999999999876 789999999975432 23346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++|+|.+++. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 155 (323)
T 3tki_A 84 LEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (323)
T ss_dssp EECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeecccee
Confidence 99999999998873 23468999999999999999999998 89999999999999999999999999999866
Q ss_pred CCCCC-ceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 750 PEGKG-SIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
..... .......||+.|+|||++.+..+ + ++||||.
T Consensus 156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diwsl 194 (323)
T 3tki_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194 (323)
T ss_dssp EETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHH
T ss_pred ccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHH
Confidence 43221 22234679999999999988876 4 7999983
No 108
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.97 E-value=2.7e-31 Score=278.38 Aligned_cols=184 Identities=27% Similarity=0.401 Sum_probs=155.3
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEEe
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 672 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 672 (787)
++|++.+.||+|+||.||+|+..+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999888899999999976544444557889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCCC
Q 003911 673 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 752 (787)
Q Consensus 673 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 752 (787)
+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 82 LDQ-DLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CSE-EHHHHHHT----STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred cCC-CHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 975 89888743 23468999999999999999999998 89999999999999999999999999999876433
Q ss_pred CCceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 753 KGSIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 753 ~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
.. ......||+.|+|||++.+. .++ ++|+||.
T Consensus 154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 187 (288)
T 1ob3_A 154 VR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSV 187 (288)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTHHHHHHH
T ss_pred cc-ccccccccccccCchheeCCCCCCcHHHHHHH
Confidence 21 22335789999999999764 466 8999983
No 109
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=5e-31 Score=281.20 Aligned_cols=186 Identities=26% Similarity=0.453 Sum_probs=157.6
Q ss_pred cCCCcccceeccccceEEEEEEEe----CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 667 (787)
.++|++.+.||+|+||.||+|+.. .+..||||+++.. ......+++.+|++++++++||||+++++++.+.+..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 457999999999999999999874 3556999999763 34455678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEeeCCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999853 23468999999999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCCce--eeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGSI--ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
......... .....+|+.|+|||++.+..++ ++||||.
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 240 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHH
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHH
Confidence 775543221 2223467889999999988888 8999983
No 110
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.97 E-value=6.5e-31 Score=296.09 Aligned_cols=189 Identities=31% Similarity=0.493 Sum_probs=164.2
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.+.... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999875 6999999999764332 33457789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++|+|.+++..... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 999999999999865322 13468999999999999999999998 89999999999999999999999999999887
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... .....+||+.|+|||++.+..++ ++|+||.
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSl 375 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHH
T ss_pred cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcc
Confidence 54432 22345899999999999998888 8999983
No 111
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.97 E-value=2.4e-31 Score=287.99 Aligned_cols=185 Identities=29% Similarity=0.430 Sum_probs=151.2
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHH-HHhcCCCccceEEeEEEeCCeeEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAV-LTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
.++|++.+.||+|+||.||+|+.+ +++.||||++++.... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357999999999999999999876 6889999999875432 3334566677776 567899999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 117 v~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 9999999999998854 1368899999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......+||+.|+|||++.+..++ ++|+||.
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 225 (373)
T 2r5t_A 189 NIEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCL 225 (373)
T ss_dssp GBCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHH
T ss_pred cccCC-CccccccCCccccCHHHhCCCCCCchhhhHHH
Confidence 43332 223446899999999999999888 8999983
No 112
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.3e-31 Score=282.83 Aligned_cols=183 Identities=27% Similarity=0.457 Sum_probs=159.0
Q ss_pred cCCCcccceeccccceEEEEEEE-eCCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+. .+++.||||++...... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999987 47899999999764322 23346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+ +|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 9999 78999888542 468999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
.... .....+||+.|+|||++.+..+ + ++||||.
T Consensus 159 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Diwsl 194 (336)
T 3h4j_B 159 TDGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSC 194 (336)
T ss_dssp TTSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHH
T ss_pred cCCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHH
Confidence 5432 2234679999999999998877 4 8999983
No 113
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97 E-value=1.4e-30 Score=285.21 Aligned_cols=188 Identities=18% Similarity=0.263 Sum_probs=162.4
Q ss_pred cCCCcccceeccc--cceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 592 TNNFSEENILGRG--GFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
.++|++.+.||+| +||.||+|+.. +++.||||++..........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3579999999999 99999999876 79999999998766566667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+..
T Consensus 104 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999998652 22468999999999999999999998 8999999999999999999999999999865
Q ss_pred cCCCCC------ceeeeeccccCccccccccc--CCcC-cceeecC
Q 003911 749 APEGKG------SIETRIAGTFGYLAPEYAVH--TRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~-~~DiWS~ 785 (787)
...... .......||+.|+|||++.+ ..++ ++||||.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 223 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSV 223 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHH
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHH
Confidence 432211 11122478999999999988 5677 8999983
No 114
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.97 E-value=2e-30 Score=282.14 Aligned_cols=184 Identities=23% Similarity=0.339 Sum_probs=160.1
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 3468999999999999999999875 78999999987632 33456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC--CCcEEEeecccce
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR 747 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~ 747 (787)
|||+++|+|.+++.. ....+++.++..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++
T Consensus 127 ~E~~~gg~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 127 LEFLSGGELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp EECCCCCBHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred EEcCCCCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccce
Confidence 999999999988843 22468999999999999999999998 89999999999999974 5789999999999
Q ss_pred ecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
...... ......||+.|+|||++.+..++ ++||||.
T Consensus 200 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 236 (387)
T 1kob_A 200 KLNPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAI 236 (387)
T ss_dssp ECCTTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHH
T ss_pred ecCCCc--ceeeeccCCCccCchhccCCCCCCcccEeeH
Confidence 875433 23345799999999999998888 8999983
No 115
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=9.9e-31 Score=275.58 Aligned_cols=184 Identities=32% Similarity=0.489 Sum_probs=152.2
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc------------------------hhHHHHHHHHHHHH
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG------------------------KGLTEFKSEIAVLT 646 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~~~~E~~~l~ 646 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++....... ...+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 368999999999999999999865 68999999997643211 12356899999999
Q ss_pred hcCCCccceEEeEEEe--CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcC
Q 003911 647 KVRHRHLVALLGHCLD--GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRD 724 (787)
Q Consensus 647 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 724 (787)
+++||||+++++++.+ .+..++||||+++++|.+++ ....+++.++..++.|++.||+|||+ .+|+|||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~D 162 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP------TLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRD 162 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS------CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccC
Confidence 9999999999999987 56789999999999997754 22478999999999999999999998 8999999
Q ss_pred CCCCCEEECCCCcEEEeecccceecCCCCCceeeeeccccCcccccccccCCc---C-cceeecC
Q 003911 725 LKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRW---S-SCSYWAG 785 (787)
Q Consensus 725 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~-~~DiWS~ 785 (787)
|||+||+++.++.+||+|||+++....... ......||+.|+|||++.+... + ++|+||.
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl 226 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHH
T ss_pred CCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhH
Confidence 999999999999999999999987754432 2334679999999999987653 4 7899983
No 116
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=4.7e-31 Score=295.44 Aligned_cols=186 Identities=25% Similarity=0.390 Sum_probs=146.0
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC-----C
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----N 664 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 664 (787)
+.++|++.+.||+|+||.||+|... +++.||||++..........+++.+|++++++++||||+++++++... .
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3478999999999999999999765 789999999976555556678899999999999999999999999543 5
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
..|+||||+ +++|.+++.. ...+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccc
Confidence 689999998 5789888843 3468999999999999999999998 899999999999999999999999999
Q ss_pred cceecCCCCC--------------------------ceeeeeccccCccccccc-ccCCcC-cceeecC
Q 003911 745 LVRLAPEGKG--------------------------SIETRIAGTFGYLAPEYA-VHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~-~~DiWS~ 785 (787)
+|+....... ...+..+||+.|+|||++ .+..|+ ++||||.
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSl 270 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHH
Confidence 9987643211 122346789999999986 455677 8999983
No 117
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.1e-30 Score=286.03 Aligned_cols=186 Identities=32% Similarity=0.476 Sum_probs=149.0
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEeCC--e
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGN--E 665 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~ 665 (787)
.+.++|++.+.||+|+||.||+|... +++.||||++..........+++.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 45678999999999999999999865 7899999999765555666778899999999997 999999999998654 6
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 745 (787)
.|+||||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 899999997 689888853 368899999999999999999998 8999999999999999999999999999
Q ss_pred ceecCCCC--------------------CceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 746 VRLAPEGK--------------------GSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
|+...... .......+||+.|+|||++.+ ..++ ++||||.
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl 217 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSL 217 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHH
Confidence 98764311 112234679999999999987 5677 8999983
No 118
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=1.8e-30 Score=271.47 Aligned_cols=185 Identities=26% Similarity=0.451 Sum_probs=163.3
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4678999999999999999999875 689999999987666666678899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc---EEEeecccc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLV 746 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DFG~a 746 (787)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||.+
T Consensus 84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~ 155 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155 (284)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence 9999999998888542 468999999999999999999998 89999999999999986655 999999999
Q ss_pred eecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
........ .....||+.|+|||++.+..++ ++|+||.
T Consensus 156 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 193 (284)
T 3kk8_A 156 IEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193 (284)
T ss_dssp EECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred EEcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHH
Confidence 87754332 2345799999999999998888 8999983
No 119
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=5.3e-31 Score=280.79 Aligned_cols=180 Identities=29% Similarity=0.436 Sum_probs=152.9
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC----eeEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----EKLL 668 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~l 668 (787)
++|++.+.||+|+||.||+|+.. ++.||||++... .......++|+.++++++||||+++++++.... ..++
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 57999999999999999999875 899999999653 334456677999999999999999999998754 3699
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC----------CeEEcCCCCCCEEECCCCcE
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ----------SFIHRDLKPSNILLGDDMRA 738 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~----------~ivH~Dlkp~NIll~~~~~~ 738 (787)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+
T Consensus 100 v~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred EEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 9999999999999854 358999999999999999999997 6 99999999999999999999
Q ss_pred EEeecccceecCCCCCc-eeeeeccccCcccccccccC-----CcC-cceeecC
Q 003911 739 KVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHT-----RWS-SCSYWAG 785 (787)
Q Consensus 739 kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~-~~DiWS~ 785 (787)
||+|||+++........ ......||+.|+|||++.+. .++ ++||||.
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diwsl 224 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAM 224 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHH
Confidence 99999999876544322 22335799999999999873 444 7899983
No 120
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=6.3e-32 Score=289.88 Aligned_cols=178 Identities=19% Similarity=0.220 Sum_probs=148.3
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccc------cchhHHHHHHHHHHHHhcC---------CCccceE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVI------SGKGLTEFKSEIAVLTKVR---------HRHLVAL 656 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~niv~~ 656 (787)
.++|++.+.||+|+||+||+|+. +|+.||||++..... .....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35789999999999999999987 689999999986532 2334578999999999986 6666666
Q ss_pred EeEE-----------------Ee-------------CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHH
Q 003911 657 LGHC-----------------LD-------------GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 706 (787)
Q Consensus 657 ~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~ 706 (787)
.+.+ .+ .+..|+||||+++|++.+.+.+ ..+++.++..++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 6654 32 6789999999999977666522 4679999999999999
Q ss_pred HHHHHHH-hCCCCCeEEcCCCCCCEEECCCC--------------------cEEEeecccceecCCCCCceeeeeccccC
Q 003911 707 RGVEYLH-GLAHQSFIHRDLKPSNILLGDDM--------------------RAKVADFGLVRLAPEGKGSIETRIAGTFG 765 (787)
Q Consensus 707 ~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~gt~~ 765 (787)
.||+||| + .+|+||||||+|||++.++ .+||+|||+|+..... ..+||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 7 8999999999999999887 8999999999877532 2479999
Q ss_pred cccccccccCCcCcceeecC
Q 003911 766 YLAPEYAVHTRWSSCSYWAG 785 (787)
Q Consensus 766 y~aPE~~~~~~~~~~DiWS~ 785 (787)
|||||++.+....++||||.
T Consensus 243 y~aPE~~~g~~~~~~Diwsl 262 (336)
T 2vuw_A 243 SMDEDLFTGDGDYQFDIYRL 262 (336)
T ss_dssp TTCSGGGCCCSSHHHHHHHH
T ss_pred ccChhhhcCCCccceehhhh
Confidence 99999999877339999984
No 121
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=275.77 Aligned_cols=183 Identities=27% Similarity=0.346 Sum_probs=153.7
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||+||+|+.. +++.||||++...........++..|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357999999999999999999876 799999999876544445555666677666666 899999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+ +++|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 136 ~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred Eecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9999 77998888542 2468999999999999999999998 89999999999999999999999999999877
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... ......||+.|+|||++.+ .++ ++||||.
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~Diwsl 241 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSL 241 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHH
T ss_pred ccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHH
Confidence 5432 2233569999999999887 455 9999983
No 122
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.97 E-value=1.8e-30 Score=275.93 Aligned_cols=188 Identities=27% Similarity=0.414 Sum_probs=145.9
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|... +++.||+|+++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 467999999999999999999865 68999999997643 2334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 671 EYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
||++ |+|.+++...... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 6999988654322 22458999999999999999999998 89999999999999999999999999999877
Q ss_pred CCCCCceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
..... ......||+.|+|||++.+. .++ ++||||.
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 195 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSC 195 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred CCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHH
Confidence 54322 22345789999999999874 466 8999983
No 123
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.97 E-value=1.3e-30 Score=289.02 Aligned_cols=186 Identities=27% Similarity=0.411 Sum_probs=156.1
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC-----C
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----N 664 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 664 (787)
+.++|++.+.||+|+||.||+|... +++.||||++..........+++.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 4578999999999999999999875 688999999987555556678899999999999999999999999776 5
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
..|+||||++ ++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence 6899999995 699988843 3468999999999999999999998 899999999999999999999999999
Q ss_pred cceecCCCCCc---------------------eeeeeccccCccccccc-ccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGS---------------------IETRIAGTFGYLAPEYA-VHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~-~~DiWS~ 785 (787)
+|+........ .....+||+.|+|||++ .+..++ ++||||.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSl 238 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWST 238 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHH
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchH
Confidence 99876543211 12456899999999986 455677 8999983
No 124
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=275.33 Aligned_cols=186 Identities=24% Similarity=0.391 Sum_probs=158.4
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC--eeEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN--EKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 668 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 467999999999999999999876 58999999997633 2334677889999999999999999999998765 6799
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----CCCCcEEEeecc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMRAKVADFG 744 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG 744 (787)
||||+++++|.+++..... ...+++.+++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEeCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 9999999999999965322 2348999999999999999999998 899999999999999 778889999999
Q ss_pred cceecCCCCCceeeeeccccCcccccccc--------cCCcC-cceeecC
Q 003911 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAV--------HTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~-~~DiWS~ 785 (787)
+++....... .....||+.|+|||++. +..++ ++||||.
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diwsl 209 (319)
T 4euu_A 162 AARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209 (319)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHH
T ss_pred CceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHH
Confidence 9988755432 23457999999999986 46666 8999983
No 125
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=4.8e-31 Score=275.77 Aligned_cols=184 Identities=28% Similarity=0.459 Sum_probs=157.0
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
.++|++.+.||+|+||.||+|+..++..||+|+++.... ..+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 457999999999999999999998888999999976432 34678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
|+++++|.+++... ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 100 YMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred ccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999998542 2358999999999999999999998 8999999999999999999999999999986644
Q ss_pred CCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..........||+.|+|||++.+..++ ++|+||.
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 207 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHH
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHH
Confidence 322222234567889999999988888 8999983
No 126
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=6e-30 Score=293.30 Aligned_cols=281 Identities=23% Similarity=0.256 Sum_probs=211.7
Q ss_pred CCC-CCCCCCcccEEE------cC-CCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEE
Q 003911 50 GWS-DTDPCKWNHVVC------IE-DKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVM 121 (787)
Q Consensus 50 ~w~-~~~~C~w~gv~C------~~-~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ 121 (787)
.|. ..+||.|.|..| .. ..+++.|++++++|+ .+|..+. ++|++|+|++|+|+.+++ .+++|++|+
T Consensus 14 ~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~L~ 87 (622)
T 3g06_A 14 AWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRTLE 87 (622)
T ss_dssp HHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC---CCTTCCEEE
T ss_pred HHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC---cCCCCCEEE
Confidence 464 457889977532 11 246899999999999 8898887 899999999999997665 679999999
Q ss_pred cccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccc
Q 003911 122 LSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQ 201 (787)
Q Consensus 122 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~ 201 (787)
|++|+|+.++. .+++|++|+|++|+++. +|. .+++|+.|++++|+|++. |. .+++|++|+|++|+
T Consensus 88 Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~--l~~---~l~~L~~L~L~~N~l~~l-p~-----~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 88 VSGNQLTSLPV----LPPGLLELSIFSNPLTH--LPA---LPSGLCKLWIFGNQLTSL-PV-----LPPGLQELSVSDNQ 152 (622)
T ss_dssp ECSCCCSCCCC----CCTTCCEEEECSCCCCC--CCC---CCTTCCEEECCSSCCSCC-CC-----CCTTCCEEECCSSC
T ss_pred cCCCcCCcCCC----CCCCCCEEECcCCcCCC--CCC---CCCCcCEEECCCCCCCcC-CC-----CCCCCCEEECcCCc
Confidence 99999999887 78999999999999994 666 678999999999999874 43 35899999999999
Q ss_pred cccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCc
Q 003911 202 LIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPD 281 (787)
Q Consensus 202 l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 281 (787)
+++ +|.. +++|+.|++++|.|++.+ ..+++|+.|+|++|+|++ +|.
T Consensus 153 l~~-l~~~-----------------------------~~~L~~L~L~~N~l~~l~---~~~~~L~~L~Ls~N~l~~-l~~ 198 (622)
T 3g06_A 153 LAS-LPAL-----------------------------PSELCKLWAYNNQLTSLP---MLPSGLQELSVSDNQLAS-LPT 198 (622)
T ss_dssp CSC-CCCC-----------------------------CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC-CCC
T ss_pred CCC-cCCc-----------------------------cCCCCEEECCCCCCCCCc---ccCCCCcEEECCCCCCCC-CCC
Confidence 985 4432 245666666666666543 334566666666666663 443
Q ss_pred cccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCC
Q 003911 282 SLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD 361 (787)
Q Consensus 282 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (787)
. +++|+.|++++|.++..++.+ .+|+.+++++|.+..+|.
T Consensus 199 ~---~~~L~~L~L~~N~l~~l~~~~---~~L~~L~Ls~N~L~~lp~---------------------------------- 238 (622)
T 3g06_A 199 L---PSELYKLWAYNNRLTSLPALP---SGLKELIVSGNRLTSLPV---------------------------------- 238 (622)
T ss_dssp C---CTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCCCC----------------------------------
T ss_pred c---cchhhEEECcCCcccccCCCC---CCCCEEEccCCccCcCCC----------------------------------
Confidence 2 355666666666666433321 344555555555444331
Q ss_pred ccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccccCCC
Q 003911 362 WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS 436 (787)
Q Consensus 362 ~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~iP~ 436 (787)
..++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++|.+|.
T Consensus 239 ------~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 239 ------LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp ------CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred ------CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 1247899999999999 4665 6789999999999999 8899999999999999999999998775
No 127
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=5e-31 Score=283.82 Aligned_cols=194 Identities=32% Similarity=0.517 Sum_probs=162.6
Q ss_pred HHhhcCCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEE
Q 003911 588 LRNVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL 661 (787)
Q Consensus 588 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 661 (787)
.....++|++.+.||+|+||.||+|+.. +++.||||+++... .....+++.+|++++++++||||+++++++.
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 3445678999999999999999999875 34889999997632 3455678999999999999999999999999
Q ss_pred eCCeeEEEEEecCCCCHHHHHHhhhhc-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Q 003911 662 DGNEKLLVFEYMPQGTLSRHIFNWAEE-------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIH 722 (787)
Q Consensus 662 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 722 (787)
+.+..++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ .+|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence 999999999999999999999653211 12568999999999999999999998 89999
Q ss_pred cCCCCCCEEECCCCcEEEeecccceecCCCCC-ceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 723 RDLKPSNILLGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 723 ~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++ ++|+||.
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 262 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 262 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHH
Confidence 99999999999999999999999976543221 122335689999999999988888 9999983
No 128
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=2.9e-31 Score=281.46 Aligned_cols=187 Identities=25% Similarity=0.391 Sum_probs=152.6
Q ss_pred hcCCCcccceeccccceEEEEEEE-eCCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe---
Q 003911 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE--- 665 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 665 (787)
+.++|++.+.||+|+||.||+|+. .+++.||||+++..... ......+.+|++++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 457899999999999999999986 47899999999765332 3445689999999999999999999999876543
Q ss_pred -eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 666 -KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 666 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
.|+||||+++++|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred ccEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 49999999999999998541 368999999999999999999998 899999999999999999999999999
Q ss_pred cceecCCCCCc--eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGS--IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 205 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHH
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHH
Confidence 99876543221 22335699999999999998888 8999983
No 129
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=2.1e-30 Score=280.87 Aligned_cols=190 Identities=26% Similarity=0.346 Sum_probs=163.8
Q ss_pred eeeHHHHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-----CCccce
Q 003911 582 VISIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-----HRHLVA 655 (787)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~ 655 (787)
.++++....+.++|++.+.||+|+||.||+|+.. +++.||||+++. .......+..|++++++++ ||||++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 3445555667789999999999999999999874 789999999864 2344567888999999996 999999
Q ss_pred EEeEEEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC-
Q 003911 656 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD- 734 (787)
Q Consensus 656 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 734 (787)
+++++...+..++||||+ +++|.+++... ....+++.++..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDP 173 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCT
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccc
Confidence 999999999999999999 99999998652 23458999999999999999999998 89999999999999975
Q ss_pred ------------------------CCcEEEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 735 ------------------------DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 735 ------------------------~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++.+||+|||+|+...... ....||+.|+|||++.+..++ ++||||.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 245 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSF 245 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHH
Confidence 7899999999998764432 335789999999999999888 9999983
No 130
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97 E-value=2.6e-30 Score=274.18 Aligned_cols=185 Identities=26% Similarity=0.358 Sum_probs=154.3
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 368999999999999999999876 6899999999775555555678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 99999999887632 3468999999999999999999998 899999999999999999999999999998775
Q ss_pred CCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
.... ......||+.|+|||++.+ ..++ ++|+||.
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 189 (311)
T 4agu_A 154 GPSD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAI 189 (311)
T ss_dssp -------------GGGCCHHHHHTCSCCCTHHHHHHH
T ss_pred Cccc-ccCCCcCCccccChHHHhcCCCCCcchhhHHH
Confidence 4332 2234578999999999976 4566 8999983
No 131
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=1.6e-30 Score=289.63 Aligned_cols=184 Identities=30% Similarity=0.491 Sum_probs=161.4
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|.+.+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 468999999999999999999876 7999999999764322 23456899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 95 MEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 999999999998842 3468999999999999999999997 89999999999999999999999999999887
Q ss_pred CCCCCceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
.... .....+||+.|+|||++.+..+ + ++|+||.
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl 202 (476)
T 2y94_A 167 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSS 202 (476)
T ss_dssp CTTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHH
T ss_pred cccc--cccccCCCcCeEChhhccCCCCCCCcceehhh
Confidence 5433 2334679999999999998876 4 8999983
No 132
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=7.5e-31 Score=285.00 Aligned_cols=185 Identities=24% Similarity=0.464 Sum_probs=148.7
Q ss_pred CCCcccceeccccceEEEEEEEe----CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
++|++.+.||+|+||.||+|+.. ++..||||+++... .....+++.+|++++++++||||+++++++.+.+..++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 57999999999999999999865 57789999997632 44556789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 124 v~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 124 VTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999854 23468999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCce--eeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSI--ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
........ .....+|+.|+|||++.+..++ ++||||.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~Sl 236 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHH
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHH
Confidence 65432211 1123457889999999998888 8999983
No 133
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=279.96 Aligned_cols=181 Identities=28% Similarity=0.440 Sum_probs=143.6
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 4578999999999999999999876 68899999997632 346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC---CCcEEEeecccc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGLV 746 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~a 746 (787)
|||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++
T Consensus 127 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 127 LELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp ECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 999999999998843 3468999999999999999999998 89999999999999975 889999999999
Q ss_pred eecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+...... ......||+.|+|||++.+..++ ++||||.
T Consensus 199 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 236 (349)
T 2w4o_A 199 KIVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSV 236 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCTHHHHHHH
T ss_pred cccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHH
Confidence 8764332 22346799999999999998888 8999983
No 134
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=9.5e-31 Score=280.09 Aligned_cols=186 Identities=26% Similarity=0.385 Sum_probs=160.4
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc------hhHHHHHHHHHHHHhcCCCccceEEeEEEe
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG------KGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 662 (787)
...++|++.+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 34578999999999999999999864 78999999998653221 234567889999999999999999999999
Q ss_pred CCeeEEEEEecCCC-CHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEe
Q 003911 663 GNEKLLVFEYMPQG-TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 741 (787)
Q Consensus 663 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 741 (787)
.+..++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999777 99888843 3468999999999999999999998 899999999999999999999999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
|||+++...... ......||+.|+|||++.+..+ + ++||||.
T Consensus 173 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Diwsl 216 (335)
T 3dls_A 173 DFGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSL 216 (335)
T ss_dssp CCTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHH
T ss_pred ecccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhH
Confidence 999998875543 2234679999999999998877 5 7999983
No 135
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.97 E-value=5.1e-30 Score=268.55 Aligned_cols=186 Identities=25% Similarity=0.367 Sum_probs=160.5
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 668 (787)
..++|++.+.||+|+||.||+|... +++.||+|++...........++.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567999999999999999999876 799999999987655556677889999999999 99999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC-------------
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD------------- 735 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------------- 735 (787)
||||+++++|.+++...... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999764332 2468999999999999999999998 899999999999999844
Q ss_pred ------CcEEEeecccceecCCCCCceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 736 ------MRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 736 ------~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
..+||+|||.+....... ...||+.|+|||++.+. .++ ++||||.
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 217 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFAL 217 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHH
T ss_pred cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHH
Confidence 479999999998775432 23589999999999876 444 8999983
No 136
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97 E-value=1.1e-30 Score=291.47 Aligned_cols=182 Identities=26% Similarity=0.382 Sum_probs=152.1
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC------
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG------ 663 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 663 (787)
..++|++.+.||+|+||.||+|... +++.||||++..........+++.+|+++++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999765 689999999987655566678899999999999999999999999754
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
...|+||||+++ ++.+.+. ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CeEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEE
Confidence 357999999975 5666652 248899999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+|+...... .....+||+.|+|||++.+..|+ ++||||.
T Consensus 209 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 249 (464)
T 3ttj_A 209 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249 (464)
T ss_dssp CCC-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHH
T ss_pred EeeeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHH
Confidence 9998765432 23446899999999999999998 9999983
No 137
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.2e-30 Score=282.81 Aligned_cols=190 Identities=28% Similarity=0.447 Sum_probs=161.7
Q ss_pred cCCCcccceeccccceEEEEEEEe--------CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEe
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 662 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 662 (787)
.++|++.+.||+|+||.||+|+.. ++..||||+++.. ......+++.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 468999999999999999999863 2357999999764 3455567899999999999 99999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 731 (787)
.+..++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+ .+|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence 99999999999999999999764321 12458999999999999999999998 89999999999999
Q ss_pred ECCCCcEEEeecccceecCCCCC-ceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 732 LGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 732 l~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++++.+||+|||+++....... .......||+.|+|||++.+..++ ++||||.
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diwsl 279 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHH
Confidence 99999999999999987654322 122334578999999999999888 8999983
No 138
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=5.5e-31 Score=286.88 Aligned_cols=185 Identities=28% Similarity=0.435 Sum_probs=158.3
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|+.. +++.||||+++.. ......+++.+|++++++++||||+++++++...+..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 357899999999999999999886 7899999998753 23444567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++... ...+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++...
T Consensus 192 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp ECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999998642 1358899999999999999999998 899999999999999999999999999998754
Q ss_pred CCCCcee-eeeccccCcccccccccCCcC-cceeec
Q 003911 751 EGKGSIE-TRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 751 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
....... ....+++.|+|||++.+..++ ++||||
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws 300 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHH
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHH
Confidence 3221111 112357789999999988888 899998
No 139
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=2.4e-30 Score=273.05 Aligned_cols=183 Identities=25% Similarity=0.421 Sum_probs=151.4
Q ss_pred hcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHh--cCCCccceEEeEEEeC----C
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCLDG----N 664 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~----~ 664 (787)
..++|++.+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++... .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 457899999999999999999987 6999999998652 34556677777777 7999999999987653 4
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEcCCCCCCEEECCCCcEE
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL-----AHQSFIHRDLKPSNILLGDDMRAK 739 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~k 739 (787)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+. ++.+|+||||||+|||++.++.+|
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred eeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 57899999999999999832 4689999999999999999999921 028999999999999999999999
Q ss_pred EeecccceecCCCCCce---eeeeccccCcccccccccC------CcC-cceeecC
Q 003911 740 VADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAVHT------RWS-SCSYWAG 785 (787)
Q Consensus 740 l~DFG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~-~~DiWS~ 785 (787)
|+|||+|+......... .....||+.|+|||++.+. .++ ++||||.
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvwsl 209 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF 209 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHH
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHH
Confidence 99999998765543322 1234799999999999887 444 8999983
No 140
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=7.8e-31 Score=273.87 Aligned_cols=186 Identities=22% Similarity=0.366 Sum_probs=146.6
Q ss_pred hcCCCcccceeccccceEEEEEEEe----CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
..++|++.+.||+|+||.||+|... .+..||+|+++.. ......+.+.+|+.++++++||||+++++++. .+..
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 3468999999999999999999864 3557999998653 23455678999999999999999999999984 5678
Q ss_pred EEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccc
Q 003911 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 746 (787)
++||||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp EEEEECCTTEEHHHHHHH----TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC----
T ss_pred EEEEecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccc
Confidence 999999999999999854 22468999999999999999999998 89999999999999999999999999999
Q ss_pred eecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+..............+|+.|+|||++.+..++ ++|+||.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 203 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 203 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHH
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHH
Confidence 87755433333344578899999999988888 8999983
No 141
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=1.8e-30 Score=277.74 Aligned_cols=182 Identities=20% Similarity=0.251 Sum_probs=157.8
Q ss_pred cCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++++ +||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 46899999999999999999986 4799999999875322 24688999999999 999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc-----EEEeecc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-----AKVADFG 744 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DFG 744 (787)
|||+ +++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||
T Consensus 84 ~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 9999 99999998542 3478999999999999999999998 89999999999999998887 9999999
Q ss_pred cceecCCCCCce------eeeeccccCcccccccccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGSI------ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++......... .....||+.|+|||++.+..++ ++|+||.
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 203 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL 203 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHH
Confidence 998765443211 2346799999999999999888 8999983
No 142
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=1.7e-30 Score=281.04 Aligned_cols=181 Identities=24% Similarity=0.348 Sum_probs=149.4
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST---TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc---cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 468999999999999999999876 78999999997633 23367889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc--EEEeeccccee
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR--AKVADFGLVRL 748 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DFG~a~~ 748 (787)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++.
T Consensus 96 e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 96 EYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp ECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 99999999998854 1368999999999999999999998 89999999999999987665 99999999975
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC--cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS--SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~DiWS~ 785 (787)
..... ......||+.|+|||++.+..++ ++||||.
T Consensus 168 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Diwsl 204 (361)
T 3uc3_A 168 SVLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSC 204 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHH
T ss_pred ccccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehh
Confidence 43322 22345799999999999888876 4899983
No 143
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=3.9e-30 Score=273.99 Aligned_cols=185 Identities=26% Similarity=0.388 Sum_probs=161.6
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc----hhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
+.++|++.+.||+|+||.||+|+.. +++.||+|++....... ...+++.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3467999999999999999999876 68999999997643321 246789999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC----cEEEe
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 741 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~ 741 (787)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 9999999999999999843 3468999999999999999999998 8999999999999999887 79999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|||+++....... .....||+.|+|||++.+..++ ++|+||.
T Consensus 162 Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 204 (321)
T 2a2a_A 162 DFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204 (321)
T ss_dssp CCTTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred cCccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHH
Confidence 9999987755332 2345699999999999988888 8999983
No 144
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=1.1e-30 Score=278.51 Aligned_cols=194 Identities=29% Similarity=0.472 Sum_probs=146.6
Q ss_pred HhhcCCCcccceeccccceEEEEEEEeC-C---cEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC
Q 003911 589 RNVTNNFSEENILGRGGFGTVYKGELHD-G---TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN 664 (787)
Q Consensus 589 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 664 (787)
....++|++.+.||+|+||.||+|+... + ..||||+++.........+++.+|++++++++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3345689999999999999999997653 3 27999999876555666788999999999999999999999998876
Q ss_pred ee------EEEEEecCCCCHHHHHHhhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc
Q 003911 665 EK------LLVFEYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR 737 (787)
Q Consensus 665 ~~------~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 737 (787)
.. ++||||+++|+|.+++...... ....+++.++..++.|++.||+|||+ .+|+||||||+||++++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCC
Confidence 55 9999999999999998654322 22358999999999999999999998 89999999999999999999
Q ss_pred EEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 738 AKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 738 ~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+||+|||+++........ ......+|+.|+|||++.+..++ ++||||.
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 225 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAF 225 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhH
Confidence 999999999876443321 22234578899999999999888 9999983
No 145
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=2.7e-30 Score=275.36 Aligned_cols=173 Identities=28% Similarity=0.410 Sum_probs=134.8
Q ss_pred cceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEeCCeeEEEEEecCC
Q 003911 598 ENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQ 675 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 675 (787)
.+.||+|+||.||+|... +++.||||++... ....+.+|+++++++. ||||+++++++.+....|+||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 378999999999999875 6899999998652 3467889999999997 99999999999999999999999999
Q ss_pred CCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC---cEEEeecccceecCCC
Q 003911 676 GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKVADFGLVRLAPEG 752 (787)
Q Consensus 676 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~~~~~~ 752 (787)
|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.....
T Consensus 91 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 91 GELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999854 2468999999999999999999998 8999999999999998665 8999999999876544
Q ss_pred CCceeeeeccccCcccccccccCCcC-cceeec
Q 003911 753 KGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 753 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
.. .....+||+.|+|||++.+..++ ++||||
T Consensus 163 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Diws 194 (325)
T 3kn6_A 163 NQ-PLKTPCFTLHYAAPELLNQNGYDESCDLWS 194 (325)
T ss_dssp ----------------------CCCCHHHHHHH
T ss_pred CC-cccccCCCcCccCHHHhcCCCCCCccchHH
Confidence 32 22345789999999999999888 899998
No 146
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=1e-30 Score=283.24 Aligned_cols=197 Identities=25% Similarity=0.405 Sum_probs=163.2
Q ss_pred HHHHHhhcCCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEE
Q 003911 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALL 657 (787)
Q Consensus 585 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~ 657 (787)
........++|++.+.||+|+||.||+|++. +++.||||+++.. ......+.+.+|+++++++ +||||++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 4445556789999999999999999999743 4578999999763 3344567899999999999 799999999
Q ss_pred eEEEeCCe-eEEEEEecCCCCHHHHHHhhhhcC-----------------------------------------------
Q 003911 658 GHCLDGNE-KLLVFEYMPQGTLSRHIFNWAEEG----------------------------------------------- 689 (787)
Q Consensus 658 ~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~----------------------------------------------- 689 (787)
+++.+.+. .++||||+++|+|.+++.......
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 99987654 899999999999999997543210
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCCCCC-
Q 003911 690 --------------LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG- 754 (787)
Q Consensus 690 --------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 754 (787)
...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 1228899999999999999999998 8999999999999999999999999999987644332
Q ss_pred ceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 755 SIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 755 ~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.......||+.|+|||++.+..++ ++||||.
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 281 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 281 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhH
Confidence 223345689999999999999888 9999983
No 147
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=1e-30 Score=275.02 Aligned_cols=185 Identities=28% Similarity=0.546 Sum_probs=153.6
Q ss_pred cCCCcccceeccccceEEEEEEE-----eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC--C
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--N 664 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~ 664 (787)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+++.+|++++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 46799999999999999999985 26899999998753 345567899999999999999999999998654 4
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
..++||||+++|+|.+++... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred ceEEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCc
Confidence 589999999999999998542 2358999999999999999999998 899999999999999999999999999
Q ss_pred cceecCCCCCc--eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGS--IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++........ ......||..|+|||++.+..++ ++||||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 203 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHH
Confidence 99876543221 12234577889999999999888 9999983
No 148
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97 E-value=4.6e-31 Score=294.30 Aligned_cols=186 Identities=27% Similarity=0.417 Sum_probs=150.7
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +++.||||+++.... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999865 789999999976432 234456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ..+|+||||||+|||++.++.+||+|||+|+..
T Consensus 227 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999998854 1368999999999999999999995 268999999999999999999999999999864
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... ......+||+.|+|||++.+..++ ++|+||.
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 335 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 335 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHH
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhh
Confidence 3332 223346799999999999999888 8999983
No 149
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=1.4e-30 Score=293.55 Aligned_cols=184 Identities=29% Similarity=0.485 Sum_probs=160.2
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|.+. ++..||||+++... ...++|.+|++++++++||||+++++++...+..++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 457889999999999999999887 48899999997632 34678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++...
T Consensus 296 E~~~~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 296 EFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp ECCTTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EccCCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 999999999999642 23468999999999999999999998 899999999999999999999999999998765
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeec
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
...........+++.|+|||++.+..++ ++||||
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwS 404 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 404 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHH
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHh
Confidence 4332222234467889999999998888 999998
No 150
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.96 E-value=9.6e-31 Score=283.78 Aligned_cols=190 Identities=26% Similarity=0.398 Sum_probs=159.0
Q ss_pred cCCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
.++|++.+.||+|+||.||+|++. +++.||||+++. ........++.+|+.++++++||||+++++++.+...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS-SCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc-ccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 467999999999999999999843 467899999975 3345556689999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC---cEEE
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAE--EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKV 740 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 740 (787)
.++||||+++|+|.+++..... .....+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999976432 122458999999999999999999998 8999999999999999554 5999
Q ss_pred eecccceecCCCC-CceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 741 ADFGLVRLAPEGK-GSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 741 ~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+|||+|+...... ........||+.|+|||++.+..++ ++||||.
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvwsl 272 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 272 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHH
Confidence 9999997543221 1122335689999999999998888 8999983
No 151
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=1.2e-29 Score=268.54 Aligned_cols=200 Identities=40% Similarity=0.655 Sum_probs=169.5
Q ss_pred ceeeeHHHHHhhcCCCccc------ceeccccceEEEEEEEeCCcEEEEEEeeccc--ccchhHHHHHHHHHHHHhcCCC
Q 003911 580 NMVISIQVLRNVTNNFSEE------NILGRGGFGTVYKGELHDGTKIAVKRMEAGV--ISGKGLTEFKSEIAVLTKVRHR 651 (787)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~ 651 (787)
...++..++..++++|... +.||+|+||.||+|.. +++.||||++.... ......+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3567888888998888776 8999999999999986 58899999987532 2234567899999999999999
Q ss_pred ccceEEeEEEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 003911 652 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (787)
Q Consensus 652 niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 731 (787)
||+++++++.+.+..++||||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEE
Confidence 99999999999999999999999999999986532 23468999999999999999999998 89999999999999
Q ss_pred ECCCCcEEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcCcceeecC
Q 003911 732 LGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWSSCSYWAG 785 (787)
Q Consensus 732 l~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~DiWS~ 785 (787)
+++++.+||+|||+++........ ......||+.|+|||++.+....++|+||.
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~sl 220 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSF 220 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHH
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHH
Confidence 999999999999999876543322 223457999999999987653338999983
No 152
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.96 E-value=3.8e-30 Score=272.05 Aligned_cols=184 Identities=27% Similarity=0.486 Sum_probs=152.6
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
.++|++.+.||+|+||.||+|+.. ..+|+|+++.........+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 468999999999999999999754 46999998875555666788999999999999999999999865 456899999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
|+++++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 112 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999998853 23578999999999999999999998 8999999999999999999999999999986543
Q ss_pred CC-CceeeeeccccCcccccccc---cCCcC-cceeecC
Q 003911 752 GK-GSIETRIAGTFGYLAPEYAV---HTRWS-SCSYWAG 785 (787)
Q Consensus 752 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~~-~~DiWS~ 785 (787)
.. ........||+.|+|||++. +..++ ++||||.
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl 223 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSY 223 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHH
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHH
Confidence 21 12223457999999999986 55667 8999983
No 153
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.96 E-value=4.1e-30 Score=268.97 Aligned_cols=186 Identities=28% Similarity=0.439 Sum_probs=155.4
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 457999999999999999999875 68999999997643 3445678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---CCCCcEEEeecccce
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLVR 747 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a~ 747 (787)
||+++|+|.+++....... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++
T Consensus 100 e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARG-KALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 9999999999986644332 568999999999999999999998 899999999999999 456789999999998
Q ss_pred ecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
...... ......||+.|+|||++.+. ++ ++|+||.
T Consensus 176 ~~~~~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~sl 211 (285)
T 3is5_A 176 LFKSDE--HSTNAAGTALYMAPEVFKRD-VTFKCDIWSA 211 (285)
T ss_dssp C------------CTTGGGCCHHHHTTC-CCHHHHHHHH
T ss_pred ecCCcc--cCcCcccccCcCChHHhccC-CCcccCeehH
Confidence 764432 22345799999999998654 55 9999983
No 154
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=278.84 Aligned_cols=184 Identities=22% Similarity=0.337 Sum_probs=153.9
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCC--CccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH--RHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++| |||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45799999999999999999988889999999998766566667889999999999976 9999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
||+ .+++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||+++..
T Consensus 88 ~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp ECC-CSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EeC-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 994 58899999854 2468999999999999999999998 8999999999999997 578999999999876
Q ss_pred CCCCCc-eeeeeccccCccccccccc-----------CCcC-cceeecC
Q 003911 750 PEGKGS-IETRIAGTFGYLAPEYAVH-----------TRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~-~~DiWS~ 785 (787)
...... .....+||+.|+|||++.+ ..++ ++||||.
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diwsl 206 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHH
Confidence 543322 2234679999999999975 5666 8999983
No 155
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.96 E-value=1.1e-30 Score=273.64 Aligned_cols=186 Identities=30% Similarity=0.466 Sum_probs=163.1
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
..++|++.+.||+|+||.||+|... ++..||+|++... ....+++.+|++++++++||||+++++++.+.+..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 4567999999999999999999876 5889999999753 34567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++.. .....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.++..
T Consensus 88 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EECCTTEEHHHHHHH---CCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEcCCCCcHHHHHHh---cccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999999854 233568999999999999999999998 89999999999999999999999999999877
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
............||+.|+|||++.+..++ ++|+||.
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 198 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHH
Confidence 65443334445678899999999988888 8999983
No 156
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.96 E-value=1.4e-30 Score=290.82 Aligned_cols=185 Identities=25% Similarity=0.443 Sum_probs=158.4
Q ss_pred hcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
..++|++.+.||+|+||.||+|.+.++..||||+++... ...+++.+|++++++++||||+++++++. .+..++||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 346789999999999999999999888999999997633 34678999999999999999999999986 56789999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++..... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 262 e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp CCCTTCBHHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred eecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999965322 257889999999999999999998 899999999999999999999999999998764
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
...........+|+.|+|||++.+..++ ++||||.
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl 371 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhH
Confidence 3221112233467889999999988888 9999983
No 157
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.96 E-value=4.8e-30 Score=278.48 Aligned_cols=179 Identities=32% Similarity=0.418 Sum_probs=150.4
Q ss_pred cccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEEecC
Q 003911 596 SEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMP 674 (787)
Q Consensus 596 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 674 (787)
...+.||+|+||.||+|... +|+.||+|+++... ....+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 33678999999999999875 78999999997632 3456789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE--CCCCcEEEeecccceecCCC
Q 003911 675 QGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL--GDDMRAKVADFGLVRLAPEG 752 (787)
Q Consensus 675 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DFG~a~~~~~~ 752 (787)
+++|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 170 ~~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 170 GGELFDRIIDE----SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp TCEEHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred CCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 99999888542 2358899999999999999999998 899999999999999 56789999999999987544
Q ss_pred CCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 753 KGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 753 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.. .....||+.|+|||++.+..++ ++|+||.
T Consensus 243 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 274 (373)
T 2x4f_A 243 EK--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSV 274 (373)
T ss_dssp CB--CCCCCSSCTTCCHHHHTTCBCCHHHHHHHH
T ss_pred cc--cccccCCCcEeChhhccCCCCCcHHhHHHH
Confidence 32 2335699999999999988888 8999983
No 158
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.96 E-value=6e-30 Score=270.92 Aligned_cols=186 Identities=28% Similarity=0.443 Sum_probs=153.1
Q ss_pred hcCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccc---cchhHHHHHHHHHHHHhcC---CCccceEEeEEEeC
Q 003911 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVI---SGKGLTEFKSEIAVLTKVR---HRHLVALLGHCLDG 663 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 663 (787)
..++|++.+.||+|+||+||+|+. .+++.||||++..... .......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999986 4789999999975332 1222356777888777764 99999999999876
Q ss_pred C-----eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcE
Q 003911 664 N-----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 738 (787)
Q Consensus 664 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 738 (787)
. ..++||||++ ++|.+++.. .....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDK---APPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHT---CCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCE
Confidence 5 4789999996 699998854 222348999999999999999999998 899999999999999999999
Q ss_pred EEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 739 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 739 kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
||+|||+++...... ......||+.|+|||++.+..++ ++||||.
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 205 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSV 205 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHH
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHH
Confidence 999999998764432 22346799999999999998888 8999983
No 159
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.96 E-value=5.7e-30 Score=266.82 Aligned_cols=186 Identities=28% Similarity=0.491 Sum_probs=141.7
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++...... ....+++.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 457999999999999999999874 7999999999764322 23357899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EECCTTEEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 999999999998853 23568999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......||+.|+|||++.+..++ ++|+||.
T Consensus 163 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 198 (278)
T 3cok_A 163 KMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSL 198 (278)
T ss_dssp C-----------------------------CTHHHHH
T ss_pred cCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHH
Confidence 54322 12235689999999999988888 8999983
No 160
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.96 E-value=3.5e-30 Score=273.52 Aligned_cols=190 Identities=27% Similarity=0.449 Sum_probs=161.2
Q ss_pred cCCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
.++|++.+.||+|+||.||+|... +++.||||+++.. ......+++.+|++++++++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 467999999999999999999762 4578999999753 344556789999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhhc-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEE-------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 726 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 726 (787)
.++||||+++++|.+++...... ....+++.+++.++.|++.||+|||+ .+|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 99999999999999999753321 12348899999999999999999998 899999999
Q ss_pred CCCEEECCCCcEEEeecccceecCCCCCce-eeeeccccCcccccccccCCcC-cceeecC
Q 003911 727 PSNILLGDDMRAKVADFGLVRLAPEGKGSI-ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 727 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+||++++++.+||+|||+++......... .....||+.|+|||++.+..++ ++||||.
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 238 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHH
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHH
Confidence 999999999999999999998775443221 2234578899999999998888 8999983
No 161
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=2e-30 Score=279.26 Aligned_cols=195 Identities=24% Similarity=0.346 Sum_probs=157.2
Q ss_pred HHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc---cchhHHHHHHHHHHHHhcCCCccceEEeEEEeC
Q 003911 588 LRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI---SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 663 (787)
Q Consensus 588 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 663 (787)
+..+.++|++.+.||+|+||.||+|... +++.||+|++..... .....+++.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456678999999999999999999875 788999999976422 345567899999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhc-----------------------------------CCCCCCHHHHHHHHHHHHHH
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEE-----------------------------------GLKPLEWNRRLTIALDVARG 708 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~qi~~~ 708 (787)
+..++||||+++|+|.+++...... ....+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988421111 01123577788999999999
Q ss_pred HHHHHhCCCCCeEEcCCCCCCEEECCCC--cEEEeecccceecCCCCC---ceeeeeccccCccccccccc--CCcC-cc
Q 003911 709 VEYLHGLAHQSFIHRDLKPSNILLGDDM--RAKVADFGLVRLAPEGKG---SIETRIAGTFGYLAPEYAVH--TRWS-SC 780 (787)
Q Consensus 709 L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~-~~ 780 (787)
|+|||+ .+|+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||++.+ ..++ ++
T Consensus 181 l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 999998 8999999999999998766 899999999987643221 12234679999999999976 5666 89
Q ss_pred eeecC
Q 003911 781 SYWAG 785 (787)
Q Consensus 781 DiWS~ 785 (787)
||||.
T Consensus 258 Diwsl 262 (345)
T 3hko_A 258 DAWSA 262 (345)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99983
No 162
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.96 E-value=1.6e-30 Score=278.03 Aligned_cols=186 Identities=25% Similarity=0.379 Sum_probs=147.5
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
...++|++.+.||+|+||.||+|... +++.||||+++.........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34568999999999999999999865 78999999997655444556678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE-----CCCCcEEEeec
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL-----GDDMRAKVADF 743 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~DF 743 (787)
||||++ |+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++ ++.+.+||+||
T Consensus 111 v~e~~~-~~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEECCS-EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEecCC-CCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999997 599988853 2358999999999999999999998 899999999999999 45556999999
Q ss_pred ccceecCCCCCceeeeeccccCcccccccccCC-cC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTR-WS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~DiWS~ 785 (787)
|+++....... ......||+.|+|||++.+.. ++ ++||||.
T Consensus 182 g~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 224 (329)
T 3gbz_A 182 GLARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224 (329)
T ss_dssp THHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred CCccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHH
Confidence 99987643322 223457899999999998754 66 8999983
No 163
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.96 E-value=3.8e-30 Score=274.73 Aligned_cols=195 Identities=28% Similarity=0.351 Sum_probs=164.3
Q ss_pred eeHHHHHhhcCCCccc-ceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeE
Q 003911 583 ISIQVLRNVTNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGH 659 (787)
Q Consensus 583 ~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~ 659 (787)
..++..+.+.++|.+. +.||+|+||.||+|... +++.||+|+++..........++.+|+.+++++ .||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 4455566777888887 89999999999999876 689999999987655555678899999999999 46999999999
Q ss_pred EEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC---CC
Q 003911 660 CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DM 736 (787)
Q Consensus 660 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~ 736 (787)
+.+.+..++||||+++|+|.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBC
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCC
Confidence 9999999999999999999988743 223568999999999999999999998 89999999999999997 78
Q ss_pred cEEEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 737 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 737 ~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.+||+|||+++...... ......||+.|+|||++.+..++ ++|+||.
T Consensus 172 ~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 219 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNI 219 (327)
T ss_dssp CEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred cEEEeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHH
Confidence 99999999998775432 22345799999999999998888 8999983
No 164
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.96 E-value=3.7e-30 Score=299.77 Aligned_cols=185 Identities=26% Similarity=0.371 Sum_probs=161.7
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 668 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++++... .....+.+..|.+++..+ +||+|+++++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 468999999999999999999876 688999999986432 234556788999999988 79999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+.
T Consensus 420 V~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999998542 368999999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......+||+.|||||++.+..|+ ++|+||.
T Consensus 492 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSl 528 (674)
T 3pfq_A 492 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAF 528 (674)
T ss_dssp CCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHH
T ss_pred cccCC-cccccccCCCcccCHhhhcCCCCCccceEech
Confidence 54332 223457899999999999999998 8999983
No 165
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=4.1e-30 Score=278.72 Aligned_cols=181 Identities=27% Similarity=0.447 Sum_probs=151.9
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC-----
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----- 664 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 664 (787)
+.++|++.+.||+|+||.||+|... +|+.||||++..........+++.+|++++++++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 3578999999999999999999874 7999999999765545556678999999999999999999999998653
Q ss_pred -eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 665 -EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 665 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
..|+||||+ +++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEee
Confidence 459999999 8899998853 368899999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
|+++..... ....+||+.|+|||++.+ ..++ ++|+||.
T Consensus 173 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 212 (367)
T 1cm8_A 173 GLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSV 212 (367)
T ss_dssp TTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHH
T ss_pred ecccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHH
Confidence 999876432 234678999999999987 5677 8999983
No 166
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.96 E-value=2.3e-30 Score=277.57 Aligned_cols=180 Identities=26% Similarity=0.441 Sum_probs=154.4
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 668 (787)
+.++|++.+.||+|+||.||+|... +++.||||++..... ...+|++++.++ +||||+++++++.+.+..|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 4567999999999999999999876 689999999976432 235688888888 79999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC----CcEEEeecc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD----MRAKVADFG 744 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DFG 744 (787)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||++.++ +.+||+|||
T Consensus 94 v~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 94 VTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 9999999999998843 2468999999999999999999998 899999999999998543 359999999
Q ss_pred cceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++....... .....+||+.|+|||++.+..++ ++|+||.
T Consensus 166 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 206 (342)
T 2qr7_A 166 FAKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSL 206 (342)
T ss_dssp TCEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeH
Confidence 9987755432 22346789999999999988888 8999983
No 167
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.2e-30 Score=281.91 Aligned_cols=185 Identities=24% Similarity=0.366 Sum_probs=157.5
Q ss_pred CCCcccceeccccceEEEEEEE----eCCcEEEEEEeecccc--cchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCe
Q 003911 593 NNFSEENILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVI--SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNE 665 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 665 (787)
++|++.+.||+|+||.||+|+. .+++.||||+++.... .....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999987 3789999999875432 123445678899999999 69999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 745 (787)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred EEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999998542 368899999999999999999998 8999999999999999999999999999
Q ss_pred ceecCCCCCceeeeeccccCcccccccccC--CcC-cceeecC
Q 003911 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVHT--RWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~-~~DiWS~ 785 (787)
++.............+||+.|+|||++.+. .++ ++||||.
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Dvwsl 248 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 248 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHH
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHH
Confidence 987654333333446799999999999864 355 8999983
No 168
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.96 E-value=9.8e-30 Score=264.92 Aligned_cols=182 Identities=27% Similarity=0.430 Sum_probs=158.1
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|... ++..||+|++.... ....+++.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 4567999999999999999999876 57899999997643 23467899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---CCCCcEEEeecccc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 746 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a 746 (787)
|||+++++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 85 MELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 999999999998854 1358999999999999999999998 899999999999999 78899999999999
Q ss_pred eecCCCCCceeeeeccccCcccccccccCCcCcceeec
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVHTRWSSCSYWA 784 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiWS 784 (787)
....... ......||+.|+|||++.+....++|+||
T Consensus 157 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~Di~s 192 (277)
T 3f3z_A 157 ARFKPGK--MMRTKVGTPYYVSPQVLEGLYGPECDEWS 192 (277)
T ss_dssp EECCTTS--CBCCCCSCTTTCCHHHHTTCBCTTHHHHH
T ss_pred eeccCcc--chhccCCCCCccChHHhcccCCchhhehh
Confidence 8775433 22345799999999998776333999998
No 169
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=2.1e-30 Score=268.35 Aligned_cols=183 Identities=30% Similarity=0.481 Sum_probs=159.0
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEEe
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 672 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 672 (787)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 57899999999999999999988889999999976432 346899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCCC
Q 003911 673 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 752 (787)
Q Consensus 673 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 752 (787)
+++++|.+++.. ....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 85 MEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CTTCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHhh----CcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999999854 22468899999999999999999998 89999999999999999999999999999866432
Q ss_pred CCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 753 KGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 753 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.........||+.|+|||++.+..++ ++|+||.
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 191 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 191 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred cccccccccccccccChhhhcCCCccchhchhhh
Confidence 21122234578899999999988888 8999983
No 170
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.96 E-value=4.5e-30 Score=271.08 Aligned_cols=185 Identities=25% Similarity=0.518 Sum_probs=156.6
Q ss_pred CCCcccceeccccceEEEEEEE-----eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC--Ce
Q 003911 593 NNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--NE 665 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 665 (787)
++|++.+.||+|+||.||+|++ .+++.||||++.... .....+++.+|++++++++||||+++++++.+. ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4688999999999999999984 368999999997643 344567899999999999999999999999876 56
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 745 (787)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccc
Confidence 89999999999999998542 2468999999999999999999998 8999999999999999999999999999
Q ss_pred ceecCCCCCc--eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGS--IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++........ ......||..|+|||++.+..++ ++|+||.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 215 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 215 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHH
Confidence 9887654321 12235688899999999998888 8999983
No 171
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.96 E-value=1.4e-29 Score=266.27 Aligned_cols=185 Identities=24% Similarity=0.377 Sum_probs=161.5
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467999999999999999999876 688999999976543 244567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.++..
T Consensus 94 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 94 LELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EECCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 999999999998743 1368999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......||+.|+|||++.+..++ ++|+||.
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 201 (294)
T 2rku_A 166 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 201 (294)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHH
T ss_pred ccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHH
Confidence 53322 22345789999999999988888 8999983
No 172
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.96 E-value=8.4e-30 Score=279.30 Aligned_cols=179 Identities=23% Similarity=0.368 Sum_probs=145.0
Q ss_pred cCCCccc-ceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEe----CC
Q 003911 592 TNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD----GN 664 (787)
Q Consensus 592 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~ 664 (787)
.++|.+. +.||+|+||.||+|... +++.||||++.. ...+.+|++++.++ +||||+++++++.. ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 4567776 78999999999999875 689999999864 24577888887554 89999999999875 56
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC---CCcEEEe
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 741 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 741 (787)
..|+||||+++|+|.+++... ....+++.++..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEE
Confidence 689999999999999998542 22468999999999999999999998 89999999999999997 7899999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|||+++...... .....+||+.|+|||++.+..++ ++||||.
T Consensus 207 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 249 (400)
T 1nxk_A 207 DFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249 (400)
T ss_dssp CCTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHH
T ss_pred ecccccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHH
Confidence 999998765432 22346789999999999988888 8999983
No 173
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=6.1e-30 Score=270.93 Aligned_cols=186 Identities=23% Similarity=0.313 Sum_probs=150.6
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999875 7899999999764332 33457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 113 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 9999999999998542 368999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
............||+.|+|||++.+..++ ++|+||.
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 221 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYAL 221 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHH
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHH
Confidence 55433333446799999999999988888 8999983
No 174
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.96 E-value=4.6e-30 Score=267.68 Aligned_cols=183 Identities=29% Similarity=0.515 Sum_probs=156.2
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|... +++.||+|++...... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999876 6789999999764322 23356789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999988542 358999999999999999999997 89999999999999999999999999998655
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... .....||+.|+|||++.+..++ ++|+||.
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 193 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHH
T ss_pred Cccc---ccccCCCCCccCHhHhccCCCCccchhHhH
Confidence 3322 2345789999999999988888 8999983
No 175
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.96 E-value=6.7e-30 Score=266.46 Aligned_cols=184 Identities=28% Similarity=0.476 Sum_probs=158.0
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
.++|++.+.||+|+||.||+|...++..||||++.... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 46799999999999999999998888899999997633 23578999999999999999999999986 456899999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
|+++++|.+++..... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.++....
T Consensus 88 ~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp CCTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999854221 258899999999999999999998 8999999999999999999999999999988755
Q ss_pred CCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..........+++.|+|||++.+..++ ++|+||.
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 196 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHH
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHH
Confidence 432222334578899999999988888 8999983
No 176
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=6e-30 Score=275.46 Aligned_cols=191 Identities=27% Similarity=0.441 Sum_probs=158.1
Q ss_pred hcCCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeC
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDG 663 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 663 (787)
..++|++.+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|+++++++ +||||+++++++...
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3468999999999999999999862 45689999997532 334557899999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhc------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCC
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEE------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDL 725 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 725 (787)
+..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence 9999999999999999999653211 11347899999999999999999998 89999999
Q ss_pred CCCCEEECCCCcEEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 726 KPSNILLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 726 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
||+||+++.++.+||+|||+++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 260 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHH
Confidence 999999999999999999999876544322 22335678899999999988888 8999983
No 177
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.96 E-value=4.5e-30 Score=280.62 Aligned_cols=183 Identities=22% Similarity=0.334 Sum_probs=153.9
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC--CCccceEEeEEEeCCeeEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 670 (787)
++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 469999999999999999998888999999999876555666788999999999996 599999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
| +.+++|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++...
T Consensus 136 E-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 568899999854 2368889999999999999999997 8999999999999995 5789999999998765
Q ss_pred CCCCc-eeeeeccccCccccccccc-----------CCcC-cceeecC
Q 003911 751 EGKGS-IETRIAGTFGYLAPEYAVH-----------TRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~-~~DiWS~ 785 (787)
..... .....+||+.|+|||++.+ ..++ ++||||.
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSl 253 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHH
Confidence 43322 2234679999999999976 3566 8999983
No 178
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.96 E-value=1.2e-29 Score=271.94 Aligned_cols=185 Identities=24% Similarity=0.378 Sum_probs=161.8
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|.+.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999876 588999999976533 344567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp ECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 9999999999987541 468999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......||+.|+|||++.+..++ ++|+||.
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 227 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 227 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHH
T ss_pred ccCcc-cccccCCCccccCHHHhccCCCCchhhHHHH
Confidence 53322 22346799999999999988888 8999983
No 179
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.96 E-value=3.2e-30 Score=287.54 Aligned_cols=183 Identities=31% Similarity=0.536 Sum_probs=152.5
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
.++|++.+.||+|+||.||+|.+..+..||||+++... ...+++.+|++++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 46789999999999999999999878889999997643 235689999999999999999999999876 67899999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
|+++|+|.+++..... ..+++.++..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 259 ~~~~gsL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCTTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhcCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999964221 358899999999999999999998 8999999999999999999999999999987654
Q ss_pred CCCceeeeeccccCcccccccccCCcC-cceeec
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
..........+++.|+|||++.+..++ ++||||
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvws 366 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHH
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHh
Confidence 332223334578899999999988888 999998
No 180
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.96 E-value=1.2e-29 Score=282.76 Aligned_cols=178 Identities=33% Similarity=0.554 Sum_probs=154.2
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC-eeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN-EKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|... ++.||||+++... ..+++.+|++++++++||||+++++++...+ ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 467899999999999999999875 8899999997632 4578999999999999999999999987765 789999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++... +...+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp ECCTTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999652 23357899999999999999999998 899999999999999999999999999998653
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeec
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
... ....+++.|+|||++.+..++ ++||||
T Consensus 341 ~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvws 371 (450)
T 1k9a_A 341 STQ----DTGKLPVKWTAPEALREKKFSTKSDVWS 371 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHH
T ss_pred ccc----cCCCCCcceeCHHHhcCCCCCcHHHHHH
Confidence 321 223578899999999999888 999998
No 181
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.7e-29 Score=262.71 Aligned_cols=209 Identities=23% Similarity=0.348 Sum_probs=168.6
Q ss_pred EEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCC
Q 003911 62 VVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSS 140 (787)
Q Consensus 62 v~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 140 (787)
-.|.... .+.++.++++++ .+|..+ .++|++|+|++|+|++.++ .|.++++|++|+|++|+++++.+..|.++++
T Consensus 6 C~C~~~~-~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 81 (285)
T 1ozn_A 6 CVCYNEP-KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL 81 (285)
T ss_dssp CEEECSS-SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred ceECCCC-CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccC
Confidence 3454332 367888888888 667655 4789999999999999776 6899999999999999999998889999999
Q ss_pred CcEEEccCCC-CCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccccccccee
Q 003911 141 LQSIEIDNNP-FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLW 219 (787)
Q Consensus 141 L~~L~L~~N~-l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~ 219 (787)
|++|+|++|+ +.. ..|..+..+++|++|++++|.+++..|..+. .+++|++|+|++|++++..+..|.
T Consensus 82 L~~L~l~~n~~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~-------- 150 (285)
T 1ozn_A 82 LEQLDLSDNAQLRS-VDPATFHGLGRLHTLHLDRCGLQELGPGLFR--GLAALQYLYLQDNALQALPDDTFR-------- 150 (285)
T ss_dssp CCEEECCSCTTCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTT--------
T ss_pred CCEEeCCCCCCccc-cCHHHhcCCcCCCEEECCCCcCCEECHhHhh--CCcCCCEEECCCCcccccCHhHhc--------
Confidence 9999999997 764 4477888888999999999988888888776 788888888888888865554443
Q ss_pred eccCCCCCcCCCCccccccCccCceEeccccccccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCc
Q 003911 220 VNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNL 298 (787)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 298 (787)
++++|++|+|++|++++.++. +..+++|+.|+|++|++++..|..|..+++|++|+|++|+
T Consensus 151 ------------------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 151 ------------------DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ------------------TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ------------------cCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 678888888888888877664 7778888888888888887778888888888888888887
Q ss_pred ccccC
Q 003911 299 LQGPV 303 (787)
Q Consensus 299 l~~~~ 303 (787)
+++.+
T Consensus 213 l~~~~ 217 (285)
T 1ozn_A 213 LSALP 217 (285)
T ss_dssp CSCCC
T ss_pred CCcCC
Confidence 76543
No 182
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.96 E-value=7.2e-30 Score=265.63 Aligned_cols=183 Identities=27% Similarity=0.461 Sum_probs=137.0
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 357999999999999999999764 7899999999765433 34467899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+ ++++.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 92 ~e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 162 (275)
T 2eue_A 92 IEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred ehhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceec
Confidence 9999 7788887743 2468999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
.... ......||+.|+|||++.+..+ + ++|+||.
T Consensus 163 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~sl 198 (275)
T 2eue_A 163 TDGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSC 198 (275)
T ss_dssp --------------CTTCCHHHHCC-----THHHHHHH
T ss_pred cCcc--cccCCCCCcCcCCceeeeCCCCCCcccchHHH
Confidence 5432 2233568999999999988776 4 8999983
No 183
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.96 E-value=1.2e-29 Score=265.02 Aligned_cols=184 Identities=26% Similarity=0.419 Sum_probs=157.7
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc----hhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|+++...... ...+++.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999876 68999999998654321 2467899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC----cEEEee
Q 003911 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVAD 742 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~D 742 (787)
++||||+++++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp EEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred EEEEeecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEe
Confidence 999999999999999854 1368999999999999999999998 8999999999999998877 899999
Q ss_pred cccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 743 FGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 743 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
||.+....... ......||+.|+|||++.+..++ ++|+||.
T Consensus 156 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 197 (283)
T 3bhy_A 156 FGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 197 (283)
T ss_dssp CTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred cccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhH
Confidence 99998765432 22345689999999999988888 8999983
No 184
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.96 E-value=1e-29 Score=272.32 Aligned_cols=190 Identities=26% Similarity=0.458 Sum_probs=159.2
Q ss_pred cCCCcccceeccccceEEEEEEE--------eCCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEe
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL--------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 662 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 662 (787)
.++|++.+.||+|+||.||+|+. .++..||||+++.. ......+++.+|+++++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 46899999999999999999986 35678999999763 2445567899999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 731 (787)
.+..++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence 99999999999999999999653211 11348899999999999999999998 89999999999999
Q ss_pred ECCCCcEEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 732 LGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 732 l~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++.++.+||+|||+++........ ......+|+.|+|||++.+..++ ++||||.
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 245 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHH
Confidence 999999999999999877544321 12234578899999999988888 8999983
No 185
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.96 E-value=4.5e-30 Score=290.05 Aligned_cols=184 Identities=28% Similarity=0.435 Sum_probs=153.9
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|+.. ++..||+|++............+.+|++++++++||||+++++++.+....|+|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3457999999999999999999876 789999999987655555567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC---CCcEEEeecccc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGLV 746 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~a 746 (787)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999888542 468999999999999999999998 89999999999999975 455999999999
Q ss_pred eecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+...... .....+||+.|+|||++.+ .++ ++||||.
T Consensus 187 ~~~~~~~--~~~~~~gt~~y~aPE~l~~-~~~~~~Diwsl 223 (494)
T 3lij_A 187 AVFENQK--KMKERLGTAYYIAPEVLRK-KYDEKCDVWSI 223 (494)
T ss_dssp EECBTTB--CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHH
T ss_pred eECCCCc--cccccCCCcCeeCHHHHcc-cCCCchhHHHH
Confidence 8875433 2334679999999999875 465 9999983
No 186
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.96 E-value=5e-30 Score=289.20 Aligned_cols=184 Identities=29% Similarity=0.454 Sum_probs=158.9
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|... +++.||||++............+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4567999999999999999999875 789999999976544455667899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEC---CCCcEEEeecccc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLV 746 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DFG~a 746 (787)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ .++.+||+|||++
T Consensus 100 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 9999999999988542 468999999999999999999998 8999999999999995 5567999999999
Q ss_pred eecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+...... .....+||+.|+|||++.+. ++ ++||||.
T Consensus 172 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~Diwsl 208 (486)
T 3mwu_A 172 TCFQQNT--KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSA 208 (486)
T ss_dssp TTBCCC------CCTTGGGGCCGGGGGSC-CCHHHHHHHH
T ss_pred eECCCCC--ccCCCcCCCCCCCHHHhCCC-CCchhhHHHH
Confidence 8664432 22346799999999999875 66 9999983
No 187
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.96 E-value=7e-30 Score=271.04 Aligned_cols=190 Identities=27% Similarity=0.442 Sum_probs=161.3
Q ss_pred cCCCcccceeccccceEEEEEEE------eCCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCC
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGN 664 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 664 (787)
.++|++.+.||+|+||.||+|+. .+++.||||+++... .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 46799999999999999999975 246889999997632 334567899999999999 9999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHHhhhh-------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAE-------------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 731 (787)
..++||||+++|+|.+++..... .....+++.+++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence 99999999999999999865321 112358999999999999999999998 89999999999999
Q ss_pred ECCCCcEEEeecccceecCCCCCce-eeeeccccCcccccccccCCcC-cceeecC
Q 003911 732 LGDDMRAKVADFGLVRLAPEGKGSI-ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 732 l~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++.++.+||+|||+++......... .....||+.|+|||++.+..++ ++||||.
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 233 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 233 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHH
Confidence 9999999999999998775543322 2234578899999999998888 8999983
No 188
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.96 E-value=8.3e-30 Score=272.75 Aligned_cols=185 Identities=26% Similarity=0.418 Sum_probs=155.0
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357999999999999999999876 5899999999775555555677899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++++|.++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~~~~~l~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 104 EFVDHTILDDLEL-----FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp ECCSEEHHHHHHH-----STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecCCcchHHHHHh-----hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 9999988887653 23468999999999999999999998 899999999999999999999999999998764
Q ss_pred CCCCceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
.... ......||+.|+|||++.+. .++ ++||||.
T Consensus 176 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~sl 211 (331)
T 4aaa_A 176 APGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAI 211 (331)
T ss_dssp ---------CCCCCTTCCHHHHTTCTTCCTHHHHHHH
T ss_pred CCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHH
Confidence 4322 22345789999999999876 566 8999983
No 189
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.96 E-value=1.7e-29 Score=268.66 Aligned_cols=183 Identities=30% Similarity=0.524 Sum_probs=156.6
Q ss_pred CCC-cccceeccccceEEEEEEEe-----CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC--C
Q 003911 593 NNF-SEENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--N 664 (787)
Q Consensus 593 ~~~-~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~ 664 (787)
++| ++.+.||+|+||.||++.+. +++.||||+++.. ......+.+.+|++++++++||||+++++++.+. .
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA 108 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence 345 89999999999999988653 6889999999764 3445567899999999999999999999999874 5
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
..++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred eEEEEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcc
Confidence 78999999999999999843 348999999999999999999998 899999999999999999999999999
Q ss_pred cceecCCCCCc--eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGS--IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 223 (318)
T 3lxp_A 180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 223 (318)
T ss_dssp GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHH
T ss_pred ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHH
Confidence 99987654321 12334578899999999998888 8999983
No 190
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.96 E-value=5.3e-30 Score=273.65 Aligned_cols=184 Identities=29% Similarity=0.493 Sum_probs=148.8
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcE----EEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 667 (787)
++|++.+.||+|+||.||+|++. +++. ||+|.+... ......+++.+|++++++++||||+++++++.+.. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 57999999999999999999864 4443 577777542 23445678999999999999999999999998765 78
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+|+||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+|+
T Consensus 93 ~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHHH----STTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCccee
Confidence 99999999999999854 23468999999999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
........ ......||+.|+|||++.+..++ ++||||.
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 205 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhh
Confidence 76544322 22234578899999999999998 9999983
No 191
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=6.2e-30 Score=266.72 Aligned_cols=189 Identities=23% Similarity=0.419 Sum_probs=159.9
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe--CCeeEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD--GNEKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 668 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.+|++++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999875 78999999998765556667889999999999999999999998864 567899
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEcCCCCCCEEECCCCcEEEeec
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS-----FIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
||||+++++|.+++..... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999976433 23468999999999999999999998 56 999999999999999999999999
Q ss_pred ccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|.++....... ......||+.|+|||++.+..++ ++|+||.
T Consensus 161 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 202 (279)
T 2w5a_A 161 GLARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202 (279)
T ss_dssp CHHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHH
T ss_pred chheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHH
Confidence 99987644321 12235689999999999998888 8999983
No 192
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.96 E-value=2e-29 Score=285.55 Aligned_cols=184 Identities=27% Similarity=0.436 Sum_probs=155.7
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc-----------hhHHHHHHHHHHHHhcCCCccceEEe
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG-----------KGLTEFKSEIAVLTKVRHRHLVALLG 658 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~~~~ 658 (787)
+.++|++.+.||+|+||.||+|+.. +++.||||++....... ...+++.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4678999999999999999999876 68899999997643221 34578999999999999999999999
Q ss_pred EEEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC--
Q 003911 659 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-- 736 (787)
Q Consensus 659 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 736 (787)
++.+....++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999988542 468999999999999999999998 8999999999999998765
Q ss_pred -cEEEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 737 -RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 737 -~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.+||+|||+++...... ......||+.|+|||++.+. ++ ++||||.
T Consensus 186 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~Diwsl 233 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLKKK-YNEKCDVWSC 233 (504)
T ss_dssp SSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTTC-BCTHHHHHHH
T ss_pred ccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhccC-CCchHHHHHH
Confidence 69999999998875443 22346799999999998754 55 9999983
No 193
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.96 E-value=1.6e-29 Score=274.79 Aligned_cols=182 Identities=26% Similarity=0.379 Sum_probs=148.8
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC-----
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----- 664 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 664 (787)
..++|++.+.||+|+||.||+|... +++.||||++..........+++.+|+.+++.++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 3478999999999999999999865 6899999999875555556678999999999999999999999998665
Q ss_pred -eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 665 -EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 665 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
..++||||++ ++|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cceEEEEEcCC-CCHHHHHh-------hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEe
Confidence 6899999996 57877773 258899999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+++...... ......||+.|+|||++.+..++ ++||||.
T Consensus 172 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 212 (371)
T 2xrw_A 172 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSV 212 (371)
T ss_dssp CC------------------CTTCCHHHHTTCCCCTTHHHHHH
T ss_pred eccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHH
Confidence 9998764332 22346799999999999998888 8999983
No 194
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.8e-29 Score=270.79 Aligned_cols=188 Identities=23% Similarity=0.391 Sum_probs=152.1
Q ss_pred HHHHHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhc--CCCccceEEeEEEe
Q 003911 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV--RHRHLVALLGHCLD 662 (787)
Q Consensus 585 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~ 662 (787)
......+.++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++..
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 3344556678999999999999999999875 899999998652 234455566666555 89999999999988
Q ss_pred C----CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEcCCCCCCEEEC
Q 003911 663 G----NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLG 733 (787)
Q Consensus 663 ~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~ 733 (787)
. ...++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+.. +.+|+||||||+||+++
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~ 176 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred CCCCCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence 7 678999999999999999854 35899999999999999999999710 12999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCce---eeeeccccCcccccccccCCcC-c------ceeec
Q 003911 734 DDMRAKVADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAVHTRWS-S------CSYWA 784 (787)
Q Consensus 734 ~~~~~kl~DFG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~-~------~DiWS 784 (787)
.++.+||+|||+++......... .....||+.|+|||++.+..+. . +||||
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diws 237 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYS 237 (337)
T ss_dssp TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHH
Confidence 99999999999998765433221 1235799999999999887665 3 89998
No 195
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.96 E-value=5.5e-30 Score=273.04 Aligned_cols=193 Identities=26% Similarity=0.449 Sum_probs=162.0
Q ss_pred HhhcCCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe
Q 003911 589 RNVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (787)
Q Consensus 589 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 662 (787)
+...++|++.+.||+|+||.||+|... +++.||||++... .......++.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 344578999999999999999999754 4788999999753 234456679999999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEE-----GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR 737 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 737 (787)
.+..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCe
Confidence 99999999999999999998764321 12457899999999999999999998 89999999999999999999
Q ss_pred EEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 738 AKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 738 ~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+||+|||+++........ ......||+.|+|||++.+..++ ++|+||.
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 226 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred EEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHH
Confidence 999999999865433211 11224578899999999988888 8999983
No 196
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.96 E-value=1.6e-29 Score=272.92 Aligned_cols=185 Identities=25% Similarity=0.412 Sum_probs=156.2
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC--------
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-------- 663 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-------- 663 (787)
++|++.+.||+|+||.||+|+.. +++.||||++............+.+|++++++++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57999999999999999999874 789999999977555555567888999999999999999999999873
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
+..++||||+++ +|.+.+.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ceEEEEEeccCC-CHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccc
Confidence 468999999974 77777643 23468999999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCCC---ceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 744 GLVRLAPEGKG---SIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
|+++....... .......||+.|+|||++.+. .++ ++||||.
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diwsl 215 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGA 215 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHH
Confidence 99987653221 122345789999999999774 456 8999983
No 197
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.96 E-value=1.2e-29 Score=280.08 Aligned_cols=185 Identities=26% Similarity=0.426 Sum_probs=146.8
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc------chhHHHHHHHHHHHHhcCCCccceEEeEEEe
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS------GKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 662 (787)
...++|.+.+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45678999999999999999999865 6899999999764322 112235889999999999999999999975
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC---CcEE
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAK 739 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~k 739 (787)
.+..++||||+++|+|.+++. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++.+ ..+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTS-----SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred cCceEEEEEcCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEE
Confidence 456899999999999988773 23568999999999999999999998 899999999999999754 4599
Q ss_pred EeecccceecCCCCCceeeeeccccCccccccccc---CCcC-cceeecC
Q 003911 740 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVH---TRWS-SCSYWAG 785 (787)
Q Consensus 740 l~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~-~~DiWS~ 785 (787)
|+|||+|+...... .....+||+.|+|||++.+ ..++ ++|+||.
T Consensus 283 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diwsl 330 (419)
T 3i6u_A 283 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330 (419)
T ss_dssp ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHH
T ss_pred EeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhH
Confidence 99999998765432 2334679999999999864 4566 8999983
No 198
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.96 E-value=2.4e-29 Score=264.89 Aligned_cols=183 Identities=19% Similarity=0.274 Sum_probs=158.0
Q ss_pred hcCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 668 (787)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++++ +|++++++++++.+....++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 356899999999999999999986 479999999986532 234678999999999 79999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc-----EEEeec
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-----AKVADF 743 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DF 743 (787)
||||+ +++|.+++... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++. +||+||
T Consensus 84 v~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Df 155 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDF 155 (298)
T ss_dssp EEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred EEEec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEEC
Confidence 99999 99999998542 2468999999999999999999997 89999999999999987766 999999
Q ss_pred ccceecCCCCCc------eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 744 GLVRLAPEGKGS------IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 204 (298)
T 1csn_A 156 GMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEAL 204 (298)
T ss_dssp TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred ccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHH
Confidence 999877654321 12346799999999999998888 8999983
No 199
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=4.1e-29 Score=263.87 Aligned_cols=183 Identities=25% Similarity=0.466 Sum_probs=161.2
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.+.|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT-CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 357999999999999999999865 68999999997643 2345678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 100 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 100 EYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp ECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecC
Confidence 99999999998832 468999999999999999999998 899999999999999999999999999998775
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... ......||+.|+|||++.+..++ ++|+||.
T Consensus 171 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 205 (303)
T 3a7i_A 171 DTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 205 (303)
T ss_dssp TTBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred cccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHH
Confidence 4332 22345789999999999988888 8999983
No 200
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.96 E-value=1.6e-29 Score=264.41 Aligned_cols=183 Identities=26% Similarity=0.483 Sum_probs=159.6
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357999999999999999999876 6889999999764322 23356799999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999988542 358899999999999999999997 89999999999999999999999999999766
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.... .....||+.|+|||++.+..++ ++|+||.
T Consensus 165 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 198 (284)
T 2vgo_A 165 PSLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCA 198 (284)
T ss_dssp SSSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHH
T ss_pred cccc---cccccCCCCcCCHHHhccCCCCcccchhhH
Confidence 4432 2335789999999999998888 8999983
No 201
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.96 E-value=1.2e-29 Score=263.34 Aligned_cols=181 Identities=31% Similarity=0.538 Sum_probs=145.3
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeeccccc--chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS--GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|... ++.||||+++..... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 367999999999999999999875 899999998764322 23457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC---eEEcCCCCCCEEECC--------CCcE
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS---FIHRDLKPSNILLGD--------DMRA 738 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~---ivH~Dlkp~NIll~~--------~~~~ 738 (787)
|||+++++|.+++. ...+++..+..++.|++.||+|||+ .+ |+||||||+||+++. ++.+
T Consensus 85 ~e~~~~~~L~~~~~------~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 85 MEFARGGPLNRVLS------GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp EECCTTEEHHHHHT------SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred EEcCCCCCHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcce
Confidence 99999999998883 2468999999999999999999998 56 999999999999986 6789
Q ss_pred EEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 739 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 739 kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
||+|||+++...... .....||+.|+|||++.+..++ ++|+||.
T Consensus 156 kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 200 (271)
T 3dtc_A 156 KITDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSY 200 (271)
T ss_dssp EECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHH
T ss_pred EEccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHH
Confidence 999999998664432 2235689999999999998888 8999983
No 202
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.96 E-value=8.6e-30 Score=264.28 Aligned_cols=180 Identities=21% Similarity=0.333 Sum_probs=157.0
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC--CeeEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--NEKLLVF 670 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 670 (787)
++|++.+.||+|+||.||+|+.. ++.||||+++.........+++.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57999999999999999999985 89999999987665666678899999999999999999999999887 7789999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||+++|+|.+++.. .....+++.+++.++.|++.||+|||+ .+ |+||||||+||++++++.++|+|||++..
T Consensus 89 e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 89 HWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp ECCTTCBHHHHHHS---CSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred cccCCCcHHHHHhh---cccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999954 222358999999999999999999997 67 99999999999999999999999998765
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC----cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS----SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~----~~DiWS~ 785 (787)
.... ...||+.|+|||++.+..++ ++||||.
T Consensus 163 ~~~~------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~sl 197 (271)
T 3kmu_A 163 FQSP------GRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197 (271)
T ss_dssp TSCT------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHH
T ss_pred eccc------CccCCccccChhhhccCCCCCCCchhhHHHH
Confidence 4322 24689999999999887655 5999983
No 203
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=1.5e-28 Score=254.84 Aligned_cols=218 Identities=22% Similarity=0.383 Sum_probs=196.2
Q ss_pred CCCCCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCC
Q 003911 54 TDPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPS 132 (787)
Q Consensus 54 ~~~C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~ 132 (787)
.|.|.|.|+.|....+++.+++++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+++.+++
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 4789999999987677889999999999 6887776 689999999999999887 79999999999999999999999
Q ss_pred ccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc
Q 003911 133 DFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG 212 (787)
Q Consensus 133 ~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 212 (787)
..|.++++|++|+|++|+++. ..+..|..+++|++|++++|++++..+..|. .+++|++|+|++|++++..+..|.
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~- 154 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFD--SLTKLTYLSLGYNELQSLPKGVFD- 154 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCC-CCTTTTTTCSSCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTT-
T ss_pred hhhcCCCCCCEEECCCCcCCc-CCHhHcccccCCCEEECCCCccCeeCHHHhC--cCcCCCEEECCCCcCCccCHhHcc-
Confidence 999999999999999999995 3456789999999999999999999988886 899999999999999966555443
Q ss_pred ccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCE
Q 003911 213 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKI 291 (787)
Q Consensus 213 ~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 291 (787)
.+++|++|+|++|++++.++. |..+++|++|+|++|+|++..+..|..+++|+.
T Consensus 155 -------------------------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 209 (270)
T 2o6q_A 155 -------------------------KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKM 209 (270)
T ss_dssp -------------------------TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred -------------------------CCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCE
Confidence 789999999999999998875 888999999999999999766777999999999
Q ss_pred EEccCCcccccC
Q 003911 292 VNMTNNLLQGPV 303 (787)
Q Consensus 292 L~Ls~N~l~~~~ 303 (787)
|+|++|++....
T Consensus 210 L~l~~N~~~c~c 221 (270)
T 2o6q_A 210 LQLQENPWDCTC 221 (270)
T ss_dssp EECCSSCBCCSS
T ss_pred EEecCCCeeCCC
Confidence 999999987543
No 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.96 E-value=2.4e-29 Score=272.57 Aligned_cols=192 Identities=28% Similarity=0.457 Sum_probs=163.3
Q ss_pred eHHHHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc------chhHHHHHHHHHHHHhc-CCCccce
Q 003911 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS------GKGLTEFKSEIAVLTKV-RHRHLVA 655 (787)
Q Consensus 584 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l-~h~niv~ 655 (787)
.......+.++|++.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+++++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34455666788999999999999999999886 7999999999764321 12245688999999999 7999999
Q ss_pred EEeEEEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC
Q 003911 656 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 735 (787)
Q Consensus 656 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 735 (787)
+++++......++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++++
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~ 236 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDN 236 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTT
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCC
Confidence 99999999999999999999999999854 1368999999999999999999998 899999999999999999
Q ss_pred CcEEEeecccceecCCCCCceeeeeccccCcccccccccC------CcC-cceeecC
Q 003911 736 MRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHT------RWS-SCSYWAG 785 (787)
Q Consensus 736 ~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~-~~DiWS~ 785 (787)
+.+||+|||++....... ......||+.|+|||++.+. .++ ++||||.
T Consensus 237 ~~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 291 (365)
T 2y7j_A 237 MQIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291 (365)
T ss_dssp CCEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHH
T ss_pred CCEEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhH
Confidence 999999999998775443 22346799999999998643 456 8999983
No 205
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.96 E-value=7.4e-30 Score=267.57 Aligned_cols=180 Identities=22% Similarity=0.385 Sum_probs=154.9
Q ss_pred cCCCcccceeccccceEEEEEEEe-CC-------cEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DG-------TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 663 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 663 (787)
.++|++.+.||+|+||.||+|+.. ++ ..||+|++... .....+++.+|++++++++||||+++++++.++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 357999999999999999999765 33 57999998653 344567899999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc------
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR------ 737 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~------ 737 (787)
+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CCCEEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccc
Confidence 9999999999999999998642 2348899999999999999999998 89999999999999998877
Q ss_pred --EEEeecccceecCCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 738 --AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 738 --~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
+||+|||.+...... ....||+.|+|||++.+ ..++ ++||||.
T Consensus 158 ~~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl 204 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSF 204 (289)
T ss_dssp CEEEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHH
T ss_pred ceeeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHH
Confidence 999999998755322 23468999999999987 5677 8999983
No 206
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.96 E-value=2e-29 Score=270.99 Aligned_cols=180 Identities=28% Similarity=0.462 Sum_probs=155.1
Q ss_pred CCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
+.|++.+.||+|+||.||+|+. .+++.||||++..... .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588999999999999999986 4799999999976432 2344567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||++ |++.+++... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 134 e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp ECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred ecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 9996 6888877432 2468999999999999999999998 899999999999999999999999999998764
Q ss_pred CCCCceeeeeccccCcccccccc---cCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAV---HTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~-~~DiWS~ 785 (787)
.. ....||+.|+|||++. +..++ ++||||.
T Consensus 206 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~Diwsl 239 (348)
T 1u5q_A 206 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 239 (348)
T ss_dssp SB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHH
T ss_pred CC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHH
Confidence 32 2357999999999985 45666 8999983
No 207
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.96 E-value=2.9e-29 Score=265.88 Aligned_cols=189 Identities=24% Similarity=0.431 Sum_probs=151.8
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccc-ccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGV-ISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|... +++.||||++.... ......+++.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 457999999999999999999864 79999999997633 2345567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++..... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 111 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999865443 23568999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ......||+.|+|||++.+..++ ++|+||.
T Consensus 187 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 222 (310)
T 2wqm_A 187 SSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHH
T ss_pred cCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHH
Confidence 44322 22335689999999999998888 8999983
No 208
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.96 E-value=2.4e-29 Score=261.76 Aligned_cols=186 Identities=26% Similarity=0.434 Sum_probs=160.1
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG-CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc-chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 3467999999999999999999876 78999999997643 234567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 84 LEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 999999999988732 3468999999999999999999998 89999999999999999999999999999866
Q ss_pred CCCCC-ceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 750 PEGKG-SIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
..... .......||+.|+|||++.+..+ + ++|+||.
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 194 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHH
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHH
Confidence 43221 12234578999999999988776 4 7999983
No 209
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.96 E-value=7.7e-30 Score=279.77 Aligned_cols=186 Identities=24% Similarity=0.388 Sum_probs=157.5
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC--eeEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN--EKLL 668 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 668 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 457999999999999999999876 58999999997633 2334677889999999999999999999998765 6799
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----CCCCcEEEeecc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMRAKVADFG 744 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG 744 (787)
||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EECCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 9999999999999855322 2348999999999999999999998 899999999999999 777889999999
Q ss_pred cceecCCCCCceeeeeccccCccccccccc--------CCcC-cceeecC
Q 003911 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVH--------TRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~-~~DiWS~ 785 (787)
+++...... ......||+.|+|||++.+ ..++ ++||||.
T Consensus 162 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSl 209 (396)
T 4eut_A 162 AARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209 (396)
T ss_dssp GCEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHH
T ss_pred CceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHH
Confidence 998775432 2234579999999999875 4566 8999983
No 210
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.96 E-value=1.3e-29 Score=264.84 Aligned_cols=181 Identities=30% Similarity=0.510 Sum_probs=156.7
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe-------
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------- 662 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 662 (787)
+.++|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 4567999999999999999999876 79999999997632 356789999999999999999998864
Q ss_pred ---------CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEC
Q 003911 663 ---------GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG 733 (787)
Q Consensus 663 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 733 (787)
....++||||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLV 156 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEc
Confidence 345799999999999999996532 2468999999999999999999998 8999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 734 DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 734 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++.+||+|||+++....... .....||+.|+|||++.+..++ ++|+||.
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 207 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYAL 207 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHH
T ss_pred CCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHH
Confidence 999999999999987755432 2335689999999999988888 8999983
No 211
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.96 E-value=3.5e-29 Score=262.65 Aligned_cols=181 Identities=26% Similarity=0.389 Sum_probs=156.0
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe----CCeeE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEKL 667 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~ 667 (787)
..|++.+.||+|+||.||+|... ++..||+|++..........+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 35788899999999999999875 68899999998766666677889999999999999999999999875 35589
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCEEEC-CCCcEEEeecc
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFG 744 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DFG 744 (787)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++ +++.+||+|||
T Consensus 106 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 999999999999998542 468899999999999999999997 66 99999999999998 78999999999
Q ss_pred cceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++....... .....||+.|+|||++.+. ++ ++|+||.
T Consensus 178 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~~-~~~~~Di~sl 215 (290)
T 1t4h_A 178 LATLKRASF---AKAVIGTPEFMAPEMYEEK-YDESVDVYAF 215 (290)
T ss_dssp GGGGCCTTS---BEESCSSCCCCCGGGGGTC-CCTHHHHHHH
T ss_pred Ccccccccc---cccccCCcCcCCHHHHhcc-CCCcchHHHH
Confidence 997554332 2345799999999988765 55 9999983
No 212
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.96 E-value=6.7e-30 Score=267.93 Aligned_cols=185 Identities=31% Similarity=0.533 Sum_probs=146.4
Q ss_pred hcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
..++|++.+.||+|+||.||+|+.. ..||+|+++.........+.+.+|++++++++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3468999999999999999999754 4699999987655666678899999999999999999999965 456689999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 99 e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 99 QWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp ECCCEEEHHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EecCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccc
Confidence 99999999998843 23468999999999999999999998 899999999999999999999999999998654
Q ss_pred CCCC-ceeeeeccccCcccccccc---cCCcC-cceeecC
Q 003911 751 EGKG-SIETRIAGTFGYLAPEYAV---HTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~-~~DiWS~ 785 (787)
.... .......||+.|+|||++. +..++ ++||||.
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl 211 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHH
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHH
Confidence 3221 2223457999999999987 55666 8999983
No 213
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.96 E-value=6.1e-30 Score=272.81 Aligned_cols=183 Identities=26% Similarity=0.410 Sum_probs=147.7
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
++|++.+.||+|+||.||+|+.. +++.||||++.... .......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57999999999999999999876 78999999986532 12222245679999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
|++ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 81 YLD-KDLKQYLDD----CGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp CCS-EEHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ccc-cCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 996 589888754 23468999999999999999999998 8999999999999999999999999999986643
Q ss_pred CCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
... ......||+.|+|||++.+ ..++ ++||||.
T Consensus 153 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 187 (324)
T 3mtl_A 153 PTK-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGV 187 (324)
T ss_dssp -----------CGGGCCHHHHTTCCCCCTHHHHHHH
T ss_pred Ccc-ccccccCcccccChhhhcCCCCCCcHHHHHHH
Confidence 322 2234578999999999987 4566 8999983
No 214
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.96 E-value=7.4e-30 Score=272.32 Aligned_cols=184 Identities=27% Similarity=0.496 Sum_probs=151.7
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcE----EEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 667 (787)
++|++.+.||+|+||.||+|.+. +++. ||+|++.... .....+++.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 57999999999999999999865 4444 7777775432 2333456789999999999999999999886 45688
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 91 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCccc
Confidence 999999999999998542 2468889999999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
........ ......||+.|+|||++.+..++ ++|+||.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 203 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHH
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHh
Confidence 77544322 23345688899999999988888 9999983
No 215
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.96 E-value=1.2e-29 Score=269.15 Aligned_cols=196 Identities=31% Similarity=0.472 Sum_probs=152.6
Q ss_pred HHHhhcCCCcccceeccccceEEEEEEEe----CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe
Q 003911 587 VLRNVTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (787)
Q Consensus 587 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 662 (787)
......++|++.+.||+|+||.||+|... +++.||+|+++.........+++.+|++++++++||||+++++++.+
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 33344578999999999999999999764 34589999998765556667889999999999999999999999987
Q ss_pred CCe-----eEEEEEecCCCCHHHHHHhhh-hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC
Q 003911 663 GNE-----KLLVFEYMPQGTLSRHIFNWA-EEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 736 (787)
Q Consensus 663 ~~~-----~~lv~e~~~~gsL~~~l~~~~-~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 736 (787)
.+. .++||||+++|+|.+++.... ......+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCC
Confidence 653 499999999999999985432 1234578999999999999999999997 8999999999999999999
Q ss_pred cEEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 737 RAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 737 ~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.+||+|||+++........ ......+++.|+|||++.+..++ ++|+||.
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 235 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 235 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHH
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHH
Confidence 9999999999876443221 12234578899999999998888 8999983
No 216
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.96 E-value=3.6e-30 Score=280.62 Aligned_cols=185 Identities=17% Similarity=0.230 Sum_probs=150.5
Q ss_pred cCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccc-cchhHHHHHHHH---HHHHhcCCCccceEE-------eE
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVI-SGKGLTEFKSEI---AVLTKVRHRHLVALL-------GH 659 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~---~~l~~l~h~niv~~~-------~~ 659 (787)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... .....+.+.+|+ +++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999985 4799999999986432 344567899999 455556899999998 66
Q ss_pred EEeCCe-----------------eEEEEEecCCCCHHHHHHhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 003911 660 CLDGNE-----------------KLLVFEYMPQGTLSRHIFNWAEEG--LKPLEWNRRLTIALDVARGVEYLHGLAHQSF 720 (787)
Q Consensus 660 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 720 (787)
+.+.+. .|+||||+ +|+|.+++.....-. ...+++..++.|+.||+.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 665532 78999999 689999997532211 1234468888999999999999998 899
Q ss_pred EEcCCCCCCEEECCCCcEEEeecccceecCCCCCceeeeeccccCcccccccccC-----------CcC-cceeecC
Q 003911 721 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHT-----------RWS-SCSYWAG 785 (787)
Q Consensus 721 vH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~-~~DiWS~ 785 (787)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++.+. .++ ++||||.
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSl 299 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHH
Confidence 9999999999999999999999999986432 3344678 999999999887 788 8999983
No 217
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.96 E-value=1.2e-29 Score=286.14 Aligned_cols=184 Identities=28% Similarity=0.447 Sum_probs=160.1
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
+.++|++.+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4467999999999999999999876 7999999999765433 4456789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---CCCCcEEEeeccc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 745 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~ 745 (787)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 9999999999998843 3468999999999999999999998 899999999999999 5678999999999
Q ss_pred ceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++...... .....+||+.|+|||++.+. ++ ++||||.
T Consensus 176 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~Diwsl 213 (484)
T 3nyv_A 176 STHFEASK--KMKDKIGTAYYIAPEVLHGT-YDEKCDVWST 213 (484)
T ss_dssp HHHBCCCC--SHHHHTTGGGTCCHHHHHTC-CCTHHHHHHH
T ss_pred eEEccccc--ccccCCCCccccCceeecCC-CCCcceeHHH
Confidence 98775443 22345799999999999874 55 9999983
No 218
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.7e-29 Score=271.91 Aligned_cols=187 Identities=29% Similarity=0.397 Sum_probs=150.3
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc---hhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG---KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
...++|++.+.||+|+||.||+|... +|+.||||++....... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999875 68999999997533221 123468899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 745 (787)
.++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred eEEEEEcCCC-CHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 9999999975 88887743 33468889999999999999999998 8999999999999999999999999999
Q ss_pred ceecCCCCCceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
++....... ......||+.|+|||++.+. .++ ++||||.
T Consensus 159 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 199 (346)
T 1ua2_A 159 AKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAV 199 (346)
T ss_dssp GSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHH
T ss_pred ceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhH
Confidence 987654332 23345789999999999765 466 8999983
No 219
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.96 E-value=1.8e-29 Score=263.47 Aligned_cols=185 Identities=24% Similarity=0.408 Sum_probs=153.5
Q ss_pred cCCCcccceeccccceEEEEEEEeC----CcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 667 (787)
.++|++.+.||+|+||.||+|.... +..||+|++.... .....+++.+|++++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4679999999999999999997652 3469999987642 34456789999999999999999999999865 4568
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp EEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred EEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCc
Confidence 999999999999998542 2458899999999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..............+|+.|+|||++.+..++ ++|+||.
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 200 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 200 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHH
Confidence 7655433333345578899999999988888 8999983
No 220
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.96 E-value=1.9e-29 Score=268.04 Aligned_cols=185 Identities=25% Similarity=0.392 Sum_probs=151.1
Q ss_pred hcCCCccc-ceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeE
Q 003911 591 VTNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 591 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 667 (787)
+.+.|++. +.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+..+
T Consensus 10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 34678884 78999999999999854 79999999997642 33467889999999995 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc---EEEeecc
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFG 744 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DFG 744 (787)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||
T Consensus 88 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 159 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFD 159 (316)
T ss_dssp EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTT
T ss_pred EEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEcc
Confidence 999999999999998542 368999999999999999999998 89999999999999998765 9999999
Q ss_pred cceecCCCCC------ceeeeeccccCccccccccc-----CCcC-cceeecC
Q 003911 745 LVRLAPEGKG------SIETRIAGTFGYLAPEYAVH-----TRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~-~~DiWS~ 785 (787)
+++....... ......+||+.|+|||++.+ ..++ ++||||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diwsl 212 (316)
T 2ac3_A 160 LGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212 (316)
T ss_dssp CCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHH
T ss_pred CccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhH
Confidence 9876542211 11123469999999999975 4456 8999983
No 221
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.96 E-value=4.1e-29 Score=261.61 Aligned_cols=181 Identities=32% Similarity=0.614 Sum_probs=152.1
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchh-----HHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKG-----LTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|++......... .+++.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 368999999999999999999875 7899999998764332221 268999999999999999999999987654
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCEEECCCCc-----E
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMR-----A 738 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~ 738 (787)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++. +
T Consensus 97 -~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred -eEEEEecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeE
Confidence 799999999999888843 23478999999999999999999997 67 999999999999988776 9
Q ss_pred EEeecccceecCCCCCceeeeeccccCcccccccc--cCCcC-cceeecC
Q 003911 739 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV--HTRWS-SCSYWAG 785 (787)
Q Consensus 739 kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~-~~DiWS~ 785 (787)
||+|||+++.... ......||+.|+|||++. +..++ ++|+||.
T Consensus 169 kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~sl 214 (287)
T 4f0f_A 169 KVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSF 214 (287)
T ss_dssp EECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHH
T ss_pred EeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHH
Confidence 9999999985433 233467999999999984 44556 8999983
No 222
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.96 E-value=3e-29 Score=267.99 Aligned_cols=184 Identities=28% Similarity=0.465 Sum_probs=158.1
Q ss_pred CCCcccceeccccceEEEEEEE-----eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe--CCe
Q 003911 593 NNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD--GNE 665 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~ 665 (787)
++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5799999999999999999985 36889999998763 34456779999999999999999999999874 456
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 745 (787)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccc
Confidence 899999999999999986532 358999999999999999999998 8999999999999999999999999999
Q ss_pred ceecCCCCCce--eeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGSI--ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++......... .....||+.|+|||++.+..++ ++||||.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 216 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHH
Confidence 98775443221 1234588889999999998888 9999983
No 223
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96 E-value=8.1e-30 Score=276.23 Aligned_cols=183 Identities=25% Similarity=0.390 Sum_probs=158.8
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|... +++.||+|++... ......+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 467999999999999999999876 7899999999764 24455678999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++++|.+++... ..+++..+..++.|++.||+|||+ +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred ECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999998542 358899999999999999999997 2389999999999999999999999999987553
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
... .....||+.|+|||++.+..++ ++||||.
T Consensus 184 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 216 (360)
T 3eqc_A 184 DSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSM 216 (360)
T ss_dssp HHC-------CCCCTTCCHHHHTTCCCSHHHHHHHH
T ss_pred ccc---ccCCCCCCCeECHHHHcCCCCCchhhHHHH
Confidence 221 2335789999999999999888 8999983
No 224
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.96 E-value=1.5e-30 Score=274.76 Aligned_cols=182 Identities=25% Similarity=0.387 Sum_probs=140.3
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHh--cCCCccceEEeEEEeCC----e
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCLDGN----E 665 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~ 665 (787)
.++|++.+.||+|+||.||+|+.. ++.||||++... ...++.+|.+++.. ++||||+++++++.... .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 467999999999999999999874 899999998642 34567788888888 79999999999998776 7
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEcCCCCCCEEECCCCcEEE
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGDDMRAKV 740 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl 740 (787)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+|||... ..+|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-B
T ss_pred eEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEE
Confidence 8999999999999999843 25778889999999999999999210 289999999999999999999999
Q ss_pred eecccceecCCCCCce---eeeeccccCcccccccccC------CcC-cceeecC
Q 003911 741 ADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAVHT------RWS-SCSYWAG 785 (787)
Q Consensus 741 ~DFG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~-~~DiWS~ 785 (787)
+|||+++......... .....||+.|+|||++.+. .++ ++||||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diwsl 204 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 204 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHH
Confidence 9999997665443221 2234799999999999876 343 7999994
No 225
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=4e-29 Score=261.73 Aligned_cols=184 Identities=24% Similarity=0.442 Sum_probs=155.9
Q ss_pred CCCcccc-eeccccceEEEEEEEe---CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 593 NNFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 593 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
++|.+.+ .||+|+||.||+|... ++..||||+++.. ......+++.+|++++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566666 9999999999999753 6788999999764 2345567899999999999999999999999 4566899
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEECCTTEEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceee
Confidence 9999999999998843 23468999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCce--eeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSI--ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
........ .....||+.|+|||++.+..++ ++|+||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 199 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 199 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHH
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHH
Confidence 75443221 1223468899999999988888 8999983
No 226
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=4.1e-29 Score=272.91 Aligned_cols=183 Identities=22% Similarity=0.381 Sum_probs=151.3
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC-----
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG----- 663 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 663 (787)
...++|++.+.||+|+||.||+|... +|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 35678999999999999999999864 799999999875321 234799999999999999999998543
Q ss_pred ---------------------------------CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 003911 664 ---------------------------------NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 710 (787)
Q Consensus 664 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~ 710 (787)
...++||||++ |+|.+.+....... ..+++..+..++.|++.||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~-~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSG-RSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHH
Confidence 33789999997 58888887654433 57899999999999999999
Q ss_pred HHHhCCCCCeEEcCCCCCCEEEC-CCCcEEEeecccceecCCCCCceeeeeccccCcccccccccCC-cC-cceeecC
Q 003911 711 YLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTR-WS-SCSYWAG 785 (787)
Q Consensus 711 ~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~DiWS~ 785 (787)
|||+ .+|+||||||+||+++ +++.+||+|||+|+....... .....||+.|+|||++.+.. ++ ++||||.
T Consensus 156 ~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 228 (383)
T 3eb0_A 156 FIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSI 228 (383)
T ss_dssp HHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHH
T ss_pred HHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhH
Confidence 9997 8999999999999998 688999999999987754432 23457899999999988754 66 8999984
No 227
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.96 E-value=1.1e-29 Score=275.61 Aligned_cols=186 Identities=17% Similarity=0.225 Sum_probs=149.8
Q ss_pred hcCCCcccceeccccceEEEEEEEeC------CcEEEEEEeecccccc---------hhHHHHHHHHHHHHhcCCCccce
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELHD------GTKIAVKRMEAGVISG---------KGLTEFKSEIAVLTKVRHRHLVA 655 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~ 655 (787)
..++|++.+.||+|+||.||+|.+.. ++.||||++....... .....+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34689999999999999999998764 4789999987642110 01122345566677788999999
Q ss_pred EEeEEEeC----CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 003911 656 LLGHCLDG----NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (787)
Q Consensus 656 ~~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 731 (787)
+++++... ...++||||+ +++|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+|||
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nil 184 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEE
Confidence 99999764 4579999999 9999999854 23569999999999999999999998 89999999999999
Q ss_pred EC--CCCcEEEeecccceecCCCCCc------eeeeeccccCcccccccccCCcC-cceeec
Q 003911 732 LG--DDMRAKVADFGLVRLAPEGKGS------IETRIAGTFGYLAPEYAVHTRWS-SCSYWA 784 (787)
Q Consensus 732 l~--~~~~~kl~DFG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS 784 (787)
++ .++.+||+|||+++........ ......||+.|+|||++.+..++ ++||||
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 246 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEI 246 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHH
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHH
Confidence 99 8899999999999876433211 11235599999999999999888 899998
No 228
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=267.73 Aligned_cols=180 Identities=31% Similarity=0.526 Sum_probs=146.9
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEEe
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 672 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 672 (787)
++|++.+.||+|+||.||+|+.. ++.||||++.. ....+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 57899999999999999999875 88999999864 2345789999999999999999999998863 47999999
Q ss_pred cCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc-EEEeecccceecCC
Q 003911 673 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-AKVADFGLVRLAPE 751 (787)
Q Consensus 673 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DFG~a~~~~~ 751 (787)
+++|+|.+++.... ....+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 81 AEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CTTCBHHHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCCCHHHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999985421 1234788999999999999999999754468999999999999998876 79999999976543
Q ss_pred CCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.. ....||+.|+|||++.+..++ ++||||.
T Consensus 159 ~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 189 (307)
T 2eva_A 159 HM----TNNKGSAAWMAPEVFEGSNYSEKCDVFSW 189 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHH
T ss_pred cc----ccCCCCCceEChhhhCCCCCCcHHHHHHH
Confidence 21 234689999999999998888 8999983
No 229
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.96 E-value=2.4e-29 Score=265.06 Aligned_cols=185 Identities=27% Similarity=0.434 Sum_probs=154.5
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
++|++.+.||+|+||.||+|+.. +++.||||++..........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57999999999999999999876 78999999997654444455788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
|++ ++|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.++....
T Consensus 83 ~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp CCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred ccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 997 6999888542 22468899999999999999999998 8999999999999999999999999999987643
Q ss_pred CCCceeeeeccccCcccccccccCC-cC-cceeecC
Q 003911 752 GKGSIETRIAGTFGYLAPEYAVHTR-WS-SCSYWAG 785 (787)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~DiWS~ 785 (787)
... ......||+.|+|||++.+.. ++ ++|+||.
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 190 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSL 190 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHH
T ss_pred Ccc-ccCcccccccccCcHHhhccccCChHHHHHHH
Confidence 322 222356899999999998765 55 8999983
No 230
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.96 E-value=1.1e-29 Score=275.04 Aligned_cols=181 Identities=27% Similarity=0.442 Sum_probs=140.5
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC------
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG------ 663 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 663 (787)
+.++|++.+.||+|+||.||+|... +|+.||||++..........+++.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3578999999999999999999764 789999999976554555677889999999999999999999999754
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
...++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-
T ss_pred CeEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeec
Confidence 5579999999 7899888743 468999999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
|+++..... ....+||+.|+|||++.+ ..++ ++||||.
T Consensus 177 G~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 216 (367)
T 2fst_X 177 GLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216 (367)
T ss_dssp ------------------CCCTTCCHHHHTTCCSCCTTHHHHHH
T ss_pred ccccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHH
Confidence 999875432 234679999999999987 5666 8999983
No 231
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.96 E-value=2.7e-29 Score=264.98 Aligned_cols=185 Identities=26% Similarity=0.426 Sum_probs=151.3
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe-------
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------- 662 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 662 (787)
+.++|++.+.||+|+||.||+|+.. +++.||||++.. .....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 4567999999999999999999875 799999999965 23456789999999999999999999998865
Q ss_pred ------CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC
Q 003911 663 ------GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 736 (787)
Q Consensus 663 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 736 (787)
.+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCC
Confidence 3467999999999999999854 22457888999999999999999998 8999999999999999999
Q ss_pred cEEEeecccceecCCCC-------------CceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 737 RAKVADFGLVRLAPEGK-------------GSIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 737 ~~kl~DFG~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
.+||+|||+++...... ........||+.|+|||++.+. .++ ++|+||.
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 217 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHH
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHH
Confidence 99999999998664321 1112345689999999999865 566 8999983
No 232
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.96 E-value=2.1e-29 Score=269.86 Aligned_cols=191 Identities=26% Similarity=0.414 Sum_probs=160.8
Q ss_pred hcCCCcccceeccccceEEEEEEEe-C-----CcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeC
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-D-----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDG 663 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 663 (787)
..++|++.+.||+|+||.||+|... + ...||+|++.... .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 3578999999999999999999864 2 2479999997632 344567899999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhc---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEE---------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 734 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 734 (787)
+..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECC
Confidence 9999999999999999998754321 12357899999999999999999998 89999999999999999
Q ss_pred CCcEEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 735 DMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 735 ~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++.+||+|||+++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 252 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHH
Confidence 999999999999866443322 22234578899999999998888 8999983
No 233
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3.5e-29 Score=267.91 Aligned_cols=186 Identities=25% Similarity=0.471 Sum_probs=151.8
Q ss_pred cCCCcccceeccccceEEEEEEEeC-----CcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHD-----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
.++|++.+.||+|+||.||+|.... +..||||+++... ......++.+|++++++++||||+++++++.+.+..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 3578889999999999999997652 2469999997632 445566899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccc
Q 003911 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 746 (787)
++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 122 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 122 MIITEYMENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp EEEEECCTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred EEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcc
Confidence 999999999999999854 23468999999999999999999998 89999999999999999999999999999
Q ss_pred eecCCCCCc--eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGS--IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+........ ......+|+.|+|||++.+..++ ++||||.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 236 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHH
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHH
Confidence 876543221 11223467899999999988888 8999983
No 234
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.96 E-value=7e-30 Score=290.51 Aligned_cols=185 Identities=30% Similarity=0.518 Sum_probs=157.8
Q ss_pred hcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
..++|++.+.||+|+||.||+|.+..+..||||+++... ...++|.+|++++++++||||+++++++.+ +..++||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 346789999999999999999999888889999997643 235689999999999999999999999876 6789999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++|+|.+++..... ..+++.+++.++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++...
T Consensus 341 e~~~~gsL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp CCCTTEEHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred ehhcCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 99999999999964322 358899999999999999999998 899999999999999999999999999998664
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
...........++..|+|||++.+..++ ++||||.
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSl 450 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHH
Confidence 3211111224467889999999998888 9999983
No 235
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.96 E-value=3.1e-29 Score=263.17 Aligned_cols=185 Identities=26% Similarity=0.404 Sum_probs=154.4
Q ss_pred cCCCcccc-eeccccceEEEEEEEe---CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeE
Q 003911 592 TNNFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 592 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 667 (787)
.++|++.+ .||+|+||.||+|.+. +++.||||+++.........+++.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35788888 9999999999999653 468899999987554455578899999999999999999999999 566789
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 94 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 99999999999999854 2458999999999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCCcee--eeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGSIE--TRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
.......... ....||+.|+|||++.+..++ ++|+||.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 206 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHH
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHH
Confidence 7755433221 223467899999999988888 8999983
No 236
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.96 E-value=2.5e-29 Score=263.69 Aligned_cols=187 Identities=26% Similarity=0.353 Sum_probs=144.6
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.........+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 468999999999999999999874 7899999999765433444445555666688889999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
||++ |+|.+++...... ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9997 5888887654433 3579999999999999999999998 6 9999999999999999999999999999876
Q ss_pred CCCCCceeeeeccccCccccccc----ccCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYA----VHTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~-~~DiWS~ 785 (787)
..... .....||+.|+|||++ .+..++ ++|+||.
T Consensus 161 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~sl 199 (290)
T 3fme_A 161 VDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHH
T ss_pred ccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHH
Confidence 54322 2234689999999996 455666 8999983
No 237
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.96 E-value=2.9e-29 Score=272.11 Aligned_cols=192 Identities=23% Similarity=0.355 Sum_probs=153.9
Q ss_pred eHHHHHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeeccccc---------chhHHHHHHHHHHHHhcCCCccc
Q 003911 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS---------GKGLTEFKSEIAVLTKVRHRHLV 654 (787)
Q Consensus 584 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~E~~~l~~l~h~niv 654 (787)
..+++....++|++.+.||+|+||.||+|...+++.||||++...... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456778889999999999999999999998888999999998653322 12247899999999999999999
Q ss_pred eEEeEEEeC-----CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCC
Q 003911 655 ALLGHCLDG-----NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSN 729 (787)
Q Consensus 655 ~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~N 729 (787)
++++++... ...++||||++ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 164 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGN 164 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHH
Confidence 999998643 35799999997 688888753 23468999999999999999999998 899999999999
Q ss_pred EEECCCCcEEEeecccceecCCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 730 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 730 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
|+++.++.+||+|||+++...... ......||+.|+|||++.+ ..++ ++|+||.
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 220 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSA 220 (362)
T ss_dssp EEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHH
T ss_pred EEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhH
Confidence 999999999999999998554332 2234578999999999887 5666 8999983
No 238
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.96 E-value=2.9e-29 Score=264.37 Aligned_cols=185 Identities=29% Similarity=0.486 Sum_probs=153.6
Q ss_pred CCCcccceeccccceEEEEEEEeC----CcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEE-eCCeeE
Q 003911 593 NNFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL-DGNEKL 667 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~ 667 (787)
.+|++.+.||+|+||.||+|...+ ...||+|++.. .......+++.+|++++++++||||+++++++. ..+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc-CCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 468899999999999999997542 33689998875 234455678999999999999999999999865 456789
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 104 ~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp EEEECCTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred EEEeCCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccc
Confidence 99999999999999853 23467899999999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCC---ceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKG---SIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
....... .......||+.|+|||++.+..++ ++|+||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 218 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHH
Confidence 6644321 112335678899999999998888 8999983
No 239
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=3.1e-29 Score=260.95 Aligned_cols=185 Identities=31% Similarity=0.474 Sum_probs=152.8
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
..++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3468999999999999999999876 799999999976432 23345689999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 89 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 160 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNM 160 (276)
T ss_dssp EEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGC
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccc
Confidence 99999999999998542 358899999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
..... ......||+.|+|||++.+..+ + ++|+||.
T Consensus 161 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 197 (276)
T 2h6d_A 161 MSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSC 197 (276)
T ss_dssp CCC---------------CCTGGGTTSCCCHHHHHHHHH
T ss_pred cCCCc--ceecccCCccccCHHHHcCCCCCCccchHHHH
Confidence 65432 2233568999999999988776 3 8999983
No 240
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96 E-value=2.7e-29 Score=265.38 Aligned_cols=182 Identities=27% Similarity=0.471 Sum_probs=156.4
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
+.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 4567999999999999999999875 79999999997632 22346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---CCCCcEEEeecccc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 746 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a 746 (787)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 85 MQLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp ECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 9999999999988542 368899999999999999999998 899999999999999 78889999999999
Q ss_pred eecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+...... .....||+.|+|||++.+..++ ++|+||.
T Consensus 157 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 193 (304)
T 2jam_A 157 KMEQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSI 193 (304)
T ss_dssp CCCCCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHH
T ss_pred eecCCCc---cccccCCCCccChHHhccCCCCchhhHHHH
Confidence 7654321 2335689999999999998888 8999983
No 241
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.96 E-value=2e-29 Score=267.94 Aligned_cols=196 Identities=26% Similarity=0.407 Sum_probs=162.1
Q ss_pred HHHHhhcCCCcccceeccccceEEEEEEEe------CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEe
Q 003911 586 QVLRNVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLG 658 (787)
Q Consensus 586 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~ 658 (787)
.......++|++.+.||+|+||.||+|+.. +++.||||+++.. ......+.+.+|+++++++ +||||+++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344445678999999999999999999752 4688999999764 2344557899999999999 7999999999
Q ss_pred EEEeCC-eeEEEEEecCCCCHHHHHHhhhhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 003911 659 HCLDGN-EKLLVFEYMPQGTLSRHIFNWAEEG-----------LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 726 (787)
Q Consensus 659 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 726 (787)
++...+ ..++||||+++|+|.+++....... ...+++..+..++.|++.||+|||+ .+|+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCc
Confidence 998755 4899999999999999996532210 1237899999999999999999998 899999999
Q ss_pred CCCEEECCCCcEEEeecccceecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 727 PSNILLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 727 p~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+||+++.++.+||+|||+++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 236 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHH
Confidence 99999999999999999999876544322 22335688999999999998888 9999983
No 242
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=6.3e-29 Score=267.26 Aligned_cols=189 Identities=24% Similarity=0.385 Sum_probs=157.8
Q ss_pred HHHHHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHh--cCCCccceEEeEEEe
Q 003911 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCLD 662 (787)
Q Consensus 585 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~ 662 (787)
......+.++|++.+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++..
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 344455678899999999999999999987 5999999998642 34677889999988 689999999999988
Q ss_pred CC----eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEcCCCCCCEEEC
Q 003911 663 GN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL-----AHQSFIHRDLKPSNILLG 733 (787)
Q Consensus 663 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~ 733 (787)
.. ..++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||.. +..+|+||||||+||+++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC
T ss_pred cCCccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC
Confidence 76 78999999999999999854 3589999999999999999999921 017999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCc---eeeeeccccCcccccccccC------CcC-cceeecC
Q 003911 734 DDMRAKVADFGLVRLAPEGKGS---IETRIAGTFGYLAPEYAVHT------RWS-SCSYWAG 785 (787)
Q Consensus 734 ~~~~~kl~DFG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~-~~DiWS~ 785 (787)
.++.+||+|||+++........ ......||+.|+|||++.+. .++ ++||||.
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 243 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 243 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHH
Confidence 9999999999999877554322 12335799999999999876 233 7999983
No 243
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.96 E-value=7.2e-29 Score=263.40 Aligned_cols=184 Identities=29% Similarity=0.451 Sum_probs=155.1
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ..+++.+|++++++++||||+++++++...+..++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34578999999999999999999876 68999999997632 34678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||.+..
T Consensus 102 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 102 VMEYCGAGSVSDIIRL----RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEECCTTEEHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EeecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 9999999999998853 12468999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
...... ......||+.|+|||++.+..++ ++|+||.
T Consensus 175 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 211 (314)
T 3com_A 175 LTDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 211 (314)
T ss_dssp CBTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHH
T ss_pred hhhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHH
Confidence 654322 22345789999999999998888 8999983
No 244
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.96 E-value=6.6e-29 Score=274.83 Aligned_cols=181 Identities=24% Similarity=0.326 Sum_probs=155.8
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhc------CCCccceEEeEEEeC
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV------RHRHLVALLGHCLDG 663 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~ 663 (787)
+..+|++.+.||+|+||.||+|... +++.||||+++.. .....++.+|+++++.+ .|+||+++++++...
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 4568999999999999999999765 6899999999752 33456788899888887 577999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc--EEEe
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR--AKVA 741 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~ 741 (787)
+..++||||+. ++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~ 244 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVI 244 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEEC
T ss_pred CeEEEEEeccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEe
Confidence 99999999995 6999988552 23458999999999999999999998 79999999999999999887 9999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|||+|+...... ...+||+.|+|||++.+..++ ++||||.
T Consensus 245 DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 285 (429)
T 3kvw_A 245 DFGSSCYEHQRV----YTYIQSRFYRAPEVILGARYGMPIDMWSL 285 (429)
T ss_dssp CCTTCEETTCCC----CSSCSCGGGCCHHHHHTBCCCTHHHHHHH
T ss_pred ecccceecCCcc----cccCCCCCccChHHHhCCCCCchHHHHhH
Confidence 999998764332 235789999999999999888 8999983
No 245
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.8e-29 Score=273.77 Aligned_cols=184 Identities=29% Similarity=0.487 Sum_probs=145.0
Q ss_pred CCcccceeccccceEEEEEEEeC----CcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe-CCeeEE
Q 003911 594 NFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD-GNEKLL 668 (787)
Q Consensus 594 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~l 668 (787)
.|++.+.||+|+||.||+|...+ +..||||.++. .......+++.+|+.++++++||||+++++++.. .+..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCS-CSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCC-CCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 47788999999999999997642 24689998865 2344566889999999999999999999998764 457899
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.
T Consensus 169 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEECCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEECCCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999999853 23457899999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCCCc---eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGS---IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
....... ......+|+.|+|||++.+..++ ++||||.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSl 282 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 282 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHH
Confidence 6433211 12334578899999999999888 8999983
No 246
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4e-29 Score=269.90 Aligned_cols=272 Identities=17% Similarity=0.200 Sum_probs=224.8
Q ss_pred CCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEecc
Q 003911 93 KLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSAN 172 (787)
Q Consensus 93 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~ 172 (787)
.....++++|.++.++..+. ++|++|+|++|+++++++..|.++++|++|+|++|++++ ..|..|.++++|++|+++
T Consensus 32 ~~~~c~~~~~~l~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 32 RNGICKGSSGSLNSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TTSEEECCSTTCSSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECC
T ss_pred CCeEeeCCCCCccccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc-cCHhhcCCCCCCCEEECC
Confidence 33457899999998777665 589999999999999999899999999999999999996 457789999999999999
Q ss_pred CceecccCCCCCCCCCCCCCcEEeccccccccCCC-cCcccccccceeeccCCCCCcCCCCccccccCccCceEecccc-
Q 003911 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP-ASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSN- 250 (787)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N- 250 (787)
+|++++..+..|. .+++|++|+|++|++++..+ .. +.++++|++|++++|
T Consensus 109 ~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~l~~~~~--------------------------~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 109 YNYLSNLSSSWFK--PLSSLTFLNLLGNPYKTLGETSL--------------------------FSHLTKLQILRVGNMD 160 (353)
T ss_dssp SSCCSSCCHHHHT--TCTTCSEEECTTCCCSSSCSSCS--------------------------CTTCTTCCEEEEEESS
T ss_pred CCcCCcCCHhHhC--CCccCCEEECCCCCCcccCchhh--------------------------hccCCCCcEEECCCCc
Confidence 9999987666675 89999999999999984333 23 347899999999999
Q ss_pred ccccCCC-CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCC
Q 003911 251 AFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGAC 329 (787)
Q Consensus 251 ~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~ 329 (787)
.++..++ .+.++++|++|++++|++++..|..+..+++|++|++++|+++..++.+
T Consensus 161 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~----------------------- 217 (353)
T 2z80_A 161 TFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIF----------------------- 217 (353)
T ss_dssp SCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHH-----------------------
T ss_pred cccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhh-----------------------
Confidence 4777655 5888999999999999999888999999999999999999886432210
Q ss_pred CchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhc---CCCCCCEEecccccc
Q 003911 330 DPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFA---SFKSLQRLILADNNL 406 (787)
Q Consensus 330 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~---~l~~L~~L~Ls~N~l 406 (787)
....++|+.|++++|++++..+..+. ....++.++|++|.+
T Consensus 218 ------------------------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l 261 (353)
T 2z80_A 218 ------------------------------------VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKI 261 (353)
T ss_dssp ------------------------------------HHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBC
T ss_pred ------------------------------------hhhcccccEEECCCCccccccccccccccccchhhccccccccc
Confidence 11234899999999999987766554 467789999999998
Q ss_pred cc----cCCccCcCCCCCCeeeccCCcccccCCC-----CCCCceeecCCCCCCCCCC
Q 003911 407 SG----MIPEGLSVLGALKELDVSNNQLYGKIPS-----FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 407 ~g----~ip~~l~~l~~L~~L~Ls~N~l~g~iP~-----~~~~~~~~~~gn~~~~~~~ 455 (787)
++ .+|..+..+++|++|||++|+++. +|. +..+..+.+.+|++.|..+
T Consensus 262 ~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 262 TDESLFQVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCcchhhhHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 86 478889999999999999999994 553 4567789999999988654
No 247
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.96 E-value=2e-29 Score=270.48 Aligned_cols=182 Identities=29% Similarity=0.453 Sum_probs=143.8
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHH--HHhcCCCccceEEeEEEe-----CC
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV--LTKVRHRHLVALLGHCLD-----GN 664 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~-----~~ 664 (787)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 46899999999999999999976 68999999987522 2344444444 445899999999986643 23
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEEcCCCCCCEEECCCCcE
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA------HQSFIHRDLKPSNILLGDDMRA 738 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~ 738 (787)
..++||||+++|+|.+++.. ...++..+..++.|++.||+|||+.. +.+|+||||||+|||++.++.+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred eEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 56899999999999999854 24588999999999999999999720 1199999999999999999999
Q ss_pred EEeecccceecCCCCC-------ceeeeeccccCccccccccc-------CCcC-cceeecC
Q 003911 739 KVADFGLVRLAPEGKG-------SIETRIAGTFGYLAPEYAVH-------TRWS-SCSYWAG 785 (787)
Q Consensus 739 kl~DFG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~-~~DiWS~ 785 (787)
||+|||+++....... .......||+.|+|||++.+ ..++ ++||||.
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl 221 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYAL 221 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHH
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHH
Confidence 9999999987654321 11223569999999999987 3444 7999983
No 248
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.96 E-value=3.8e-29 Score=267.17 Aligned_cols=187 Identities=33% Similarity=0.529 Sum_probs=153.3
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEE--EEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 668 (787)
++|++.+.||+|+||.||+|+.. ++..+ |+|+++.. ......+++.+|+++++++ +||||+++++++.+.+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 57999999999999999999765 56644 99988752 2344556799999999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhh-----------cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc
Q 003911 669 VFEYMPQGTLSRHIFNWAE-----------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR 737 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 737 (787)
||||+++|+|.+++..... .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence 9999999999999865320 122468999999999999999999998 89999999999999999999
Q ss_pred EEEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 738 AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 738 ~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+||+|||+++...... ......+++.|+|||++.+..++ ++|+||.
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 227 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 227 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHH
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHH
Confidence 9999999997543221 11224578899999999988888 8999983
No 249
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=9.6e-28 Score=267.12 Aligned_cols=246 Identities=16% Similarity=0.190 Sum_probs=180.4
Q ss_pred CcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccC
Q 003911 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (787)
Q Consensus 94 L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (787)
.+.++.+++.++.++..+. +++++|+|++|+|+++++..|.++++|++|+|++|+++. ..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE-ECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc-cChhhccCCccCCEEECCC
Confidence 4578999999998777665 789999999999999999999999999999999999985 3346777777777777777
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccc-c
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA-F 252 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~-l 252 (787)
|+|++..+..|. .+++|++|+|++|++++..+..|. ++++|++|+|++|. +
T Consensus 122 n~l~~~~~~~~~--~l~~L~~L~L~~N~i~~~~~~~~~--------------------------~l~~L~~L~l~~~~~l 173 (440)
T 3zyj_A 122 NRLTTIPNGAFV--YLSKLKELWLRNNPIESIPSYAFN--------------------------RIPSLRRLDLGELKRL 173 (440)
T ss_dssp SCCSSCCTTTSC--SCSSCCEEECCSCCCCEECTTTTT--------------------------TCTTCCEEECCCCTTC
T ss_pred CcCCeeCHhHhh--ccccCceeeCCCCcccccCHHHhh--------------------------hCcccCEeCCCCCCCc
Confidence 777766666664 666677777766666644443332 45555555555532 2
Q ss_pred ccCCC-CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCc
Q 003911 253 SGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDP 331 (787)
Q Consensus 253 ~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~ 331 (787)
...++ .|.++++|++|+|++|+|+ .+|. +..++
T Consensus 174 ~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~-------------------------------------------- 207 (440)
T 3zyj_A 174 SYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLI-------------------------------------------- 207 (440)
T ss_dssp CEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTTCS--------------------------------------------
T ss_pred ceeCcchhhcccccCeecCCCCcCc-cccc-cCCCc--------------------------------------------
Confidence 22222 2444455555555555444 2331 33333
Q ss_pred hhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCC
Q 003911 332 RLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIP 411 (787)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 411 (787)
+|+.|+|++|++++..|..|..+++|+.|+|++|+|++..|
T Consensus 208 ---------------------------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 248 (440)
T 3zyj_A 208 ---------------------------------------KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER 248 (440)
T ss_dssp ---------------------------------------SCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred ---------------------------------------ccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh
Confidence 45566666666666667788999999999999999999999
Q ss_pred ccCcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCCCCCCCC
Q 003911 412 EGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 412 ~~l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~~~~~~~ 455 (787)
..|..+++|++|||++|+|++..+. +..+..+.+.+||+.|...
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred hhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9999999999999999999987664 4567889999999999764
No 250
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.96 E-value=7.2e-29 Score=269.04 Aligned_cols=184 Identities=24% Similarity=0.415 Sum_probs=154.9
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC-----C
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----N 664 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 664 (787)
+.++|++.+.||+|+||.||+|... +++.||||++... ......+.+.+|++++++++||||+++++++... .
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 3468999999999999999999865 7889999999752 2344557899999999999999999999999765 3
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
..++||||++ |+|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCc
Confidence 6899999996 599888843 358999999999999999999998 899999999999999999999999999
Q ss_pred cceecCCCCCce--eeeeccccCcccccccccC-CcC-cceeecC
Q 003911 745 LVRLAPEGKGSI--ETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
+++......... .....||+.|+|||++.+. .++ ++||||.
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diwsl 218 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHH
T ss_pred ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHH
Confidence 998765432211 2345799999999987654 466 8999983
No 251
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.96 E-value=4.2e-29 Score=266.73 Aligned_cols=189 Identities=29% Similarity=0.463 Sum_probs=152.6
Q ss_pred HHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEe--
Q 003911 587 VLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD-- 662 (787)
Q Consensus 587 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~-- 662 (787)
.+....++|++.+.||+|+||.||+|+.. +++.||||++.... ...+++.+|+++++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 34445688999999999999999999874 78999999997532 3456889999999999 79999999999987
Q ss_pred ----CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcE
Q 003911 663 ----GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 738 (787)
Q Consensus 663 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 738 (787)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCE
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCE
Confidence 467899999999999999986532 2468899999999999999999998 899999999999999999999
Q ss_pred EEeecccceecCCCCCceeeeeccccCcccccccc-----cCCcC-cceeecC
Q 003911 739 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV-----HTRWS-SCSYWAG 785 (787)
Q Consensus 739 kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~-~~DiWS~ 785 (787)
||+|||++........ ......||+.|+|||++. +..++ ++|+||.
T Consensus 169 kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 220 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220 (326)
T ss_dssp EECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHH
T ss_pred EEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHH
Confidence 9999999987643322 223357899999999987 45566 8999983
No 252
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.96 E-value=1.1e-28 Score=263.98 Aligned_cols=175 Identities=21% Similarity=0.387 Sum_probs=152.4
Q ss_pred CCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEe--CCeeEE
Q 003911 593 NNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLD--GNEKLL 668 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~l 668 (787)
++|++.+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 6799999999999999999976 47899999998642 2467899999999997 9999999999998 567899
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCC-cEEEeecccce
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVR 747 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~ 747 (787)
||||+++++|.+++. .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++
T Consensus 111 v~e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 999999999988872 47889999999999999999998 8999999999999999766 89999999998
Q ss_pred ecCCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 748 LAPEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
....... .....||+.|+|||++.+ ..++ ++||||.
T Consensus 180 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl 217 (330)
T 3nsz_A 180 FYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSL 217 (330)
T ss_dssp ECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHH
T ss_pred EcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHH
Confidence 7754432 233578999999999987 5566 8999983
No 253
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96 E-value=4.2e-29 Score=266.20 Aligned_cols=184 Identities=26% Similarity=0.416 Sum_probs=150.6
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc------chhHHHHHHHHHHHHhcCCCccceEEeEEEeC
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS------GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 663 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 663 (787)
..++|++.+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567999999999999999999875 6899999998754321 12234688999999999999999999998765
Q ss_pred CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc---EEE
Q 003911 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKV 740 (787)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl 740 (787)
. .++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred c-eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 5 8999999999999988842 3468999999999999999999998 89999999999999987654 999
Q ss_pred eecccceecCCCCCceeeeeccccCcccccccc---cCCcC-cceeecC
Q 003911 741 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV---HTRWS-SCSYWAG 785 (787)
Q Consensus 741 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~-~~DiWS~ 785 (787)
+|||+++...... ......||+.|+|||++. +..++ ++|+||.
T Consensus 159 ~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl 205 (322)
T 2ycf_A 159 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205 (322)
T ss_dssp CCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHH
T ss_pred ccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHH
Confidence 9999998774432 223356899999999974 45566 8999983
No 254
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=6e-29 Score=261.85 Aligned_cols=184 Identities=27% Similarity=0.441 Sum_probs=154.5
Q ss_pred CCcccceeccccceEEEEEEEe-CC---cEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee-EE
Q 003911 594 NFSEENILGRGGFGTVYKGELH-DG---TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK-LL 668 (787)
Q Consensus 594 ~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~l 668 (787)
.|...+.||+|+||.||+|+.. ++ ..||+|++.. .......+.+.+|++++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc-cccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4666799999999999999764 22 3799999875 23345567899999999999999999999999876665 99
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+.+|+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.
T Consensus 101 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EECCCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEecccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 9999999999999853 23568899999999999999999998 8999999999999999999999999999986
Q ss_pred cCCCC---CceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGK---GSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..... ........||+.|+|||.+.+..++ ++|+||.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 214 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSF 214 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHH
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhH
Confidence 54321 1122335678999999999998888 8999983
No 255
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.96 E-value=3.4e-29 Score=267.24 Aligned_cols=185 Identities=29% Similarity=0.490 Sum_probs=148.4
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcE----EEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 666 (787)
.++|++.+.||+|+||.||+|++. +++. ||+|.+... ......+++.+|++++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 367999999999999999999864 4554 567766542 23455678999999999999999999999998765 7
Q ss_pred EEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccc
Q 003911 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 746 (787)
++|+||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~v~~~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp EEEECCCSSCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred eEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 899999999999999854 23468999999999999999999998 89999999999999999999999999999
Q ss_pred eecCCCCCc-eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 747 RLAPEGKGS-IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+........ ......||+.|+|||++.+..++ ++||||.
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 205 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred eEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHH
Confidence 876443221 22234578899999999999988 9999983
No 256
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.96 E-value=1.4e-28 Score=259.13 Aligned_cols=186 Identities=29% Similarity=0.388 Sum_probs=158.6
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc---c----chhHHHHHHHHHHHHhcC-CCccceEEeEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI---S----GKGLTEFKSEIAVLTKVR-HRHLVALLGHC 660 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~----~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 660 (787)
...++|++.+.||+|+||.||+|... +++.||||++..... . ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 45678999999999999999999875 689999999976431 1 223467889999999995 99999999999
Q ss_pred EeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEE
Q 003911 661 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 740 (787)
Q Consensus 661 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 740 (787)
...+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 165 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKL 165 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEE
Confidence 9999999999999999999998541 368999999999999999999998 89999999999999999999999
Q ss_pred eecccceecCCCCCceeeeeccccCcccccccc------cCCcC-cceeecC
Q 003911 741 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV------HTRWS-SCSYWAG 785 (787)
Q Consensus 741 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~-~~DiWS~ 785 (787)
+|||.+....... ......||+.|+|||++. ...++ ++|+||.
T Consensus 166 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 215 (298)
T 1phk_A 166 TDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215 (298)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHH
T ss_pred ecccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhH
Confidence 9999998775433 223457899999999985 34555 8999983
No 257
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=7.2e-29 Score=263.78 Aligned_cols=188 Identities=28% Similarity=0.388 Sum_probs=154.9
Q ss_pred cCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe----CCee
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEK 666 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~ 666 (787)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 46799999999999999999987 47999999998653 34556789999999999999999999999873 3467
Q ss_pred EEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccc
Q 003911 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (787)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 746 (787)
++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.+
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEEeCCCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 8999999999999998764432 3578999999999999999999998 89999999999999999999999999998
Q ss_pred eecCCCCCc--------eeeeeccccCcccccccccCC---cC-cceeecC
Q 003911 747 RLAPEGKGS--------IETRIAGTFGYLAPEYAVHTR---WS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~-~~DiWS~ 785 (787)
+........ ......||+.|+|||++.+.. ++ ++||||.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl 232 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHH
Confidence 765321110 011245799999999987654 45 8999983
No 258
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.96 E-value=6.4e-29 Score=270.01 Aligned_cols=180 Identities=24% Similarity=0.421 Sum_probs=152.9
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCee---
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK--- 666 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 666 (787)
..++|.+.+.||+|+||.||+|... +|+.||||++..........+++.+|++++++++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4578999999999999999999865 789999999987555556678899999999999999999999999877654
Q ss_pred ---EEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 667 ---LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 667 ---~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
++||||++ ++|.+++. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECST
T ss_pred eeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEec
Confidence 99999996 68877762 358999999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
|+++..... .....||+.|+|||++.+ ..++ ++|+||.
T Consensus 189 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 228 (371)
T 4exu_A 189 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSV 228 (371)
T ss_dssp TCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHH
T ss_pred CcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHH
Confidence 999866432 234578999999999987 5666 8999983
No 259
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.96 E-value=4.7e-29 Score=267.98 Aligned_cols=189 Identities=25% Similarity=0.370 Sum_probs=154.9
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHH-HHhcCCCccceEEeEEEeCCeeE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAV-LTKVRHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~ 667 (787)
...++|++.+.||+|+||.||+|+.. +|+.||||++..... .....++..|..+ ++.++||||+++++++.+.+..+
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC-CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC-cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 34578999999999999999999874 799999999976433 3334555566665 67789999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++ +|.+++...... ...+++..+..++.||+.||+|||+ +.+|+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~--~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 99999975 999888654333 3578999999999999999999997 1399999999999999999999999999998
Q ss_pred ecCCCCCceeeeeccccCccccccccc----CCcC-cceeecC
Q 003911 748 LAPEGKGSIETRIAGTFGYLAPEYAVH----TRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~-~~DiWS~ 785 (787)
...... ......||+.|+|||++.+ ..++ ++||||.
T Consensus 203 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~sl 243 (340)
T 3an0_A 203 YLVDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 243 (340)
T ss_dssp HHSCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHH
T ss_pred eccccc--ccccCCCCccccCccccccccccCCCCchhhHHHH
Confidence 764321 1223469999999999754 3566 8999983
No 260
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.96 E-value=2.5e-29 Score=270.50 Aligned_cols=185 Identities=17% Similarity=0.194 Sum_probs=148.6
Q ss_pred cCCCcccceeccccceEEEEEEEe----CCcEEEEEEeecccccc---------hhHHHHHHHHHHHHhcCCCccceEEe
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG---------KGLTEFKSEIAVLTKVRHRHLVALLG 658 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~~~~ 658 (787)
.++|++.+.||+|+||.||+|... ++..||||++....... .....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999875 57889999987642210 11234678889999999999999999
Q ss_pred EEEe----CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC
Q 003911 659 HCLD----GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 734 (787)
Q Consensus 659 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 734 (787)
++.. ....++||||+ +++|.+++... ..+++.+++.++.||+.||+|||+ .+|+||||||+||+++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEcc
Confidence 9988 67889999999 99999988431 268999999999999999999998 89999999999999998
Q ss_pred CC--cEEEeecccceecCCCCC------ceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 735 DM--RAKVADFGLVRLAPEGKG------SIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 735 ~~--~~kl~DFG~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++ .+||+|||+++....... .......||+.|+|||++.+..++ ++||||.
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 246 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEIL 246 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHH
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHH
Confidence 77 999999999987643221 111345799999999999999888 9999983
No 261
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.96 E-value=6.7e-29 Score=265.08 Aligned_cols=185 Identities=28% Similarity=0.539 Sum_probs=157.2
Q ss_pred cCCCcccceeccccceEEEEEEE-----eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCC--
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN-- 664 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-- 664 (787)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+++.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 45789999999999999999984 36899999998763 3455678999999999999999999999987654
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH----STTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred ceEEEEECCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCc
Confidence 67999999999999999854 22468999999999999999999998 899999999999999999999999999
Q ss_pred cceecCCCCCce--eeeeccccCcccccccccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGSI--ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++......... .....++..|+|||++.+..++ ++|+||.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 234 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSF 234 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHH
Confidence 998875543221 1224577889999999988888 8999983
No 262
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.6e-30 Score=275.61 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=37.3
Q ss_pred ceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcccc
Q 003911 371 NITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 432 (787)
Q Consensus 371 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 432 (787)
+|+.|+|++|+++ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 4555555555555 5555554 6677777777777744 55 7777777777777777765
No 263
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.6e-28 Score=259.02 Aligned_cols=201 Identities=22% Similarity=0.315 Sum_probs=177.0
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCcccc---------CC
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFT---------GL 138 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------~l 138 (787)
.+++.|+|++|+++ .+|..++++++|++|+|++|+|+..++.+.++++|++|+|++|++.+..|..+. ++
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l 182 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEES
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccC
Confidence 47999999999999 999999999999999999999996655899999999999999888776665554 49
Q ss_pred CCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccce
Q 003911 139 SSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSL 218 (787)
Q Consensus 139 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L 218 (787)
++|++|+|++|+++ .+|..+..+++|++|++++|.+++. |..++ .+++|++|+|++|++.+.+|..+.
T Consensus 183 ~~L~~L~L~~n~l~--~lp~~l~~l~~L~~L~L~~N~l~~l-~~~l~--~l~~L~~L~Ls~n~~~~~~p~~~~------- 250 (328)
T 4fcg_A 183 VNLQSLRLEWTGIR--SLPASIANLQNLKSLKIRNSPLSAL-GPAIH--HLPKLEELDLRGCTALRNYPPIFG------- 250 (328)
T ss_dssp TTCCEEEEEEECCC--CCCGGGGGCTTCCEEEEESSCCCCC-CGGGG--GCTTCCEEECTTCTTCCBCCCCTT-------
T ss_pred CCCCEEECcCCCcC--cchHhhcCCCCCCEEEccCCCCCcC-chhhc--cCCCCCEEECcCCcchhhhHHHhc-------
Confidence 99999999999998 7899999999999999999999964 44565 889999999999999988887764
Q ss_pred eeccCCCCCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCC
Q 003911 219 WVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNN 297 (787)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 297 (787)
++++|++|+|++|.+.+.+| .+..+++|++|+|++|++.+.+|+.+.++++|+.+++..|
T Consensus 251 -------------------~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 251 -------------------GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp -------------------CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred -------------------CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 78899999999998888777 5888999999999999999999999999999999999877
Q ss_pred ccc
Q 003911 298 LLQ 300 (787)
Q Consensus 298 ~l~ 300 (787)
.+.
T Consensus 312 ~~~ 314 (328)
T 4fcg_A 312 LQA 314 (328)
T ss_dssp GSC
T ss_pred HHH
Confidence 665
No 264
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=5.9e-29 Score=286.97 Aligned_cols=184 Identities=24% Similarity=0.431 Sum_probs=150.6
Q ss_pred CCCcccc-eeccccceEEEEEEEe---CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 593 NNFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 593 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
+++.+.+ .||+|+||.||+|.+. ++..||||+++.. ......+++.+|++++++++||||+++++++.. +..++
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC-CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 3444445 7999999999999765 4667999999764 234457889999999999999999999999976 56899
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
||||+++|+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.
T Consensus 413 v~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~ 485 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKA 485 (613)
T ss_dssp EEECCTTCBHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred EEEeCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCccc
Confidence 9999999999999843 23468999999999999999999998 8999999999999999999999999999987
Q ss_pred cCCCCCcee--eeeccccCcccccccccCCcC-cceeecC
Q 003911 749 APEGKGSIE--TRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
......... ....+|+.|+|||++.+..++ ++||||.
T Consensus 486 ~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSl 525 (613)
T 2ozo_A 486 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 525 (613)
T ss_dssp CC--------------CCTTSCHHHHHHCCCCHHHHHHHH
T ss_pred ccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHH
Confidence 644322111 123456899999999988888 9999983
No 265
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.95 E-value=4.8e-29 Score=288.42 Aligned_cols=178 Identities=26% Similarity=0.402 Sum_probs=149.4
Q ss_pred ceeccccceEEEEEEEe---CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEEecCC
Q 003911 599 NILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQ 675 (787)
Q Consensus 599 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 675 (787)
+.||+|+||.||+|.+. +++.||||+++.........+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999654 46789999998765555667899999999999999999999999964 558899999999
Q ss_pred CCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecCCCCCc
Q 003911 676 GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGS 755 (787)
Q Consensus 676 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 755 (787)
|+|.+++.. ...+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+........
T Consensus 454 g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999843 2468999999999999999999998 89999999999999999999999999999876543321
Q ss_pred --eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 756 --IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 756 --~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
......||+.|+|||++.+..++ ++||||.
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSl 558 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 558 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHH
Confidence 22234568899999999998898 9999983
No 266
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1e-27 Score=253.42 Aligned_cols=247 Identities=20% Similarity=0.225 Sum_probs=171.5
Q ss_pred cEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCC-CCChhhhcCCCCCEEeccC
Q 003911 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSW-EIPQSLRNASGLQNFSANS 173 (787)
Q Consensus 95 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~p~~~~~l~~L~~L~l~~ 173 (787)
+.++++++.++..+..+. ++|++|+|++|+++.+++..|.++++|++|+|++|+++.. ..|..+..+++|++|++++
T Consensus 10 ~~l~c~~~~l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred CEEEcCCCCcccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 478888888887766554 6889999999999998888889999999999999988731 1245666666666666666
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccc
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (787)
|.++.. |..+. .+++|++|++++|+++
T Consensus 88 n~i~~l-~~~~~--~l~~L~~L~l~~n~l~-------------------------------------------------- 114 (306)
T 2z66_A 88 NGVITM-SSNFL--GLEQLEHLDFQHSNLK-------------------------------------------------- 114 (306)
T ss_dssp CSEEEE-EEEEE--TCTTCCEEECTTSEEE--------------------------------------------------
T ss_pred CccccC-hhhcC--CCCCCCEEECCCCccc--------------------------------------------------
Confidence 666532 22232 4555555555555554
Q ss_pred cCCC--CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccc-cCCCCCCceeeeccccCCCccCCCCCCCC
Q 003911 254 GPLP--DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG-PVPEFDRSVSLDMAKGSNNFCLPSPGACD 330 (787)
Q Consensus 254 ~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~~~L~~l~~~~n~~~~~~~~~~ 330 (787)
+.++ .+..+++|++|++++|++++..|..+..+++|++|+|++|.+++ .+|..
T Consensus 115 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~------------------------ 170 (306)
T 2z66_A 115 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI------------------------ 170 (306)
T ss_dssp SSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSC------------------------
T ss_pred ccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhH------------------------
Confidence 4332 34445555555555555555555555555666666666665554 22221
Q ss_pred chhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccC
Q 003911 331 PRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMI 410 (787)
Q Consensus 331 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 410 (787)
+...++|+.|+|++|++++..|..|..+++|+.|+|++|++++..
T Consensus 171 -----------------------------------~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 171 -----------------------------------FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp -----------------------------------CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred -----------------------------------HhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 011235566666666666666778889999999999999999887
Q ss_pred CccCcCCCCCCeeeccCCcccccCCC----C-CCCceeecCCCCCCCCCC
Q 003911 411 PEGLSVLGALKELDVSNNQLYGKIPS----F-KSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 411 p~~l~~l~~L~~L~Ls~N~l~g~iP~----~-~~~~~~~~~gn~~~~~~~ 455 (787)
+..+..+++|++|||++|++++.+|. + ..+..+.+.||++.|...
T Consensus 216 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 216 TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp SGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred hhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 88899999999999999999998875 3 367789999999887653
No 267
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.95 E-value=8.9e-29 Score=264.15 Aligned_cols=186 Identities=26% Similarity=0.419 Sum_probs=154.9
Q ss_pred hcCCCcccceeccccceEEEEEEE--eCCcEEEEEEeecccccchhHHHHHHHHHHHHhc---CCCccceEEeEEE----
Q 003911 591 VTNNFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV---RHRHLVALLGHCL---- 661 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~---- 661 (787)
..++|++.+.||+|+||.||+|+. .+++.||+|++............+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 3688999999976443333334566788777766 8999999999987
Q ss_pred -eCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEE
Q 003911 662 -DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 740 (787)
Q Consensus 662 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 740 (787)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEE
Confidence 4567899999997 6999988542 22358999999999999999999998 89999999999999999999999
Q ss_pred eecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 741 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 741 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+|||+++...... ......||+.|+|||++.+..++ ++|+||.
T Consensus 162 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 205 (326)
T 1blx_A 162 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205 (326)
T ss_dssp CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHH
T ss_pred ecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHH
Confidence 9999998664322 22345789999999999988888 8999983
No 268
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.95 E-value=7.3e-29 Score=269.74 Aligned_cols=181 Identities=12% Similarity=0.102 Sum_probs=137.9
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhc--CCCccceEE-------eEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV--RHRHLVALL-------GHCL 661 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~ 661 (787)
.+|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45889999999999999999875 789999999987543 334566788886555555 699988755 4444
Q ss_pred eC-----------------CeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCC
Q 003911 662 DG-----------------NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDVARGVEYLHGLAHQ 718 (787)
Q Consensus 662 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~qi~~~L~~LH~~~~~ 718 (787)
.. ...|+||||++ |+|.+++..... .+++..+ ..++.||+.||+|||+ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQS---K 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHH---C
Confidence 33 33799999998 899999976422 3455555 7888999999999998 8
Q ss_pred CeEEcCCCCCCEEECCCCcEEEeecccceecCCCCCceeeeeccccCccccccccc--CCcC-cceeecC
Q 003911 719 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVH--TRWS-SCSYWAG 785 (787)
Q Consensus 719 ~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~-~~DiWS~ 785 (787)
+|+||||||+|||++.++.+||+|||+|+..... .....||+.|+|||++.+ ..++ ++||||.
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSl 279 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQL 279 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHH
Confidence 9999999999999999999999999999876432 223567899999999987 6777 8999983
No 269
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.9e-30 Score=275.69 Aligned_cols=267 Identities=21% Similarity=0.229 Sum_probs=194.2
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.++++.+++...+...+..+++|++|+|++|+|++.+| .|.++++|++|+|++|+++++++ |..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 456777788888875555566677788899999998888776 68888888999998888887765 888888888888
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCC
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGN 226 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~ 226 (787)
++|++++ +| ..++|++|++++|++++..+. .+++|++|+|++|++++..|..+.
T Consensus 88 s~n~l~~--l~----~~~~L~~L~l~~n~l~~~~~~-----~~~~L~~L~l~~N~l~~~~~~~~~--------------- 141 (317)
T 3o53_A 88 NNNYVQE--LL----VGPSIETLHAANNNISRVSCS-----RGQGKKNIYLANNKITMLRDLDEG--------------- 141 (317)
T ss_dssp CSSEEEE--EE----ECTTCCEEECCSSCCSEEEEC-----CCSSCEEEECCSSCCCSGGGBCTG---------------
T ss_pred cCCcccc--cc----CCCCcCEEECCCCccCCcCcc-----ccCCCCEEECCCCCCCCccchhhh---------------
Confidence 8888773 22 347888888888888776654 346788888888888765555443
Q ss_pred CcCCCCccccccCccCceEeccccccccCCCC-C-CCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCC
Q 003911 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-F-SGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP 304 (787)
Q Consensus 227 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~-~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 304 (787)
.+++|++|+|++|.+++.++. + ..+++|++|+|++|+|++. |. ...+++|++|+|++|++++.++
T Consensus 142 -----------~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~ 208 (317)
T 3o53_A 142 -----------CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP 208 (317)
T ss_dssp -----------GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG
T ss_pred -----------ccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchh
Confidence 677788888888888776543 4 3577788888888888744 32 3347778888888887776544
Q ss_pred CCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccc
Q 003911 305 EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG 384 (787)
Q Consensus 305 ~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g 384 (787)
.+. ..++|+.|+|++|+++
T Consensus 209 ~~~------------------------------------------------------------~l~~L~~L~L~~N~l~- 227 (317)
T 3o53_A 209 EFQ------------------------------------------------------------SAAGVTWISLRNNKLV- 227 (317)
T ss_dssp GGG------------------------------------------------------------GGTTCSEEECTTSCCC-
T ss_pred hhc------------------------------------------------------------ccCcccEEECcCCccc-
Confidence 321 1236777777777777
Q ss_pred cCchhhcCCCCCCEEeccccccc-ccCCccCcCCCCCCeeecc-CCcccccCCC
Q 003911 385 TISPEFASFKSLQRLILADNNLS-GMIPEGLSVLGALKELDVS-NNQLYGKIPS 436 (787)
Q Consensus 385 ~~p~~~~~l~~L~~L~Ls~N~l~-g~ip~~l~~l~~L~~L~Ls-~N~l~g~iP~ 436 (787)
.+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+++ .+.++|..|.
T Consensus 228 ~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 228 LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 45667777778888888888877 6777777777778888777 4556665553
No 270
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.95 E-value=1.5e-28 Score=271.28 Aligned_cols=180 Identities=25% Similarity=0.445 Sum_probs=147.6
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC----C--e
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG----N--E 665 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~--~ 665 (787)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ....+|++++++++||||+++++++... + .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 46899999999999999999885 69999999986532 1234799999999999999999998642 2 3
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC-CcEEEeecc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG 744 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG 744 (787)
.++||||+++ ++.+.+..... ....+++..+..++.||++||+|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEeehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccch
Confidence 5799999975 77776654433 23578999999999999999999997 899999999999999955 678999999
Q ss_pred cceecCCCCCceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
+++....... ....+||+.|+|||++.+. .++ ++||||.
T Consensus 203 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 243 (420)
T 1j1b_A 203 SAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSA 243 (420)
T ss_dssp TCEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHH
T ss_pred hhhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHH
Confidence 9987654332 2346789999999999775 667 8999983
No 271
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.95 E-value=1.5e-28 Score=258.40 Aligned_cols=184 Identities=21% Similarity=0.342 Sum_probs=150.7
Q ss_pred hhcCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEE-EeCCeeE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC-LDGNEKL 667 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~ 667 (787)
.+.++|++.+.||+|+||.||+|+. .+++.||||++..... .+++.+|++++++++|++++..++++ ...+..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 3457899999999999999999986 4789999998765322 23578899999999988877666655 6677889
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---CCCCcEEEeecc
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFG 744 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG 744 (787)
+||||+ +++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEECC-CCBHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred EEEEcc-CCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 999999 9999998853 22468999999999999999999998 899999999999999 788999999999
Q ss_pred cceecCCCCCc------eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 745 LVRLAPEGKGS------IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 201 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESL 201 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHH
Confidence 99877554321 12345799999999999999888 9999983
No 272
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=256.55 Aligned_cols=185 Identities=24% Similarity=0.411 Sum_probs=153.1
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 671 (787)
++|.....||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 34555679999999999999864 6889999999764 23445789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC-CCcEEEeecccceecC
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-DMRAKVADFGLVRLAP 750 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~ 750 (787)
|+++++|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++...
T Consensus 100 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 100 QVPGGSLSALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp CCSEEEHHHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred eCCCCCHHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 999999999986521 22356788999999999999999998 89999999999999987 8999999999998765
Q ss_pred CCCCceeeeeccccCcccccccccCC--cC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTR--WS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~-~~DiWS~ 785 (787)
.... ......||+.|+|||++.+.. ++ ++|+||.
T Consensus 175 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~sl 211 (295)
T 2clq_A 175 GINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211 (295)
T ss_dssp C------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHH
T ss_pred CCCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHH
Confidence 4322 223457899999999997754 56 8999983
No 273
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.95 E-value=6.2e-29 Score=265.47 Aligned_cols=190 Identities=26% Similarity=0.391 Sum_probs=154.8
Q ss_pred cCCCcccceeccccceEEEEEEE------eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 592 TNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
.++|++.+.||+|+||.||+|+. .+++.||||++... .......++.+|+.++++++||||+++++++.+.+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46899999999999999999973 35788999999753 344556789999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHHhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC---CCcEEE
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEE--GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKV 740 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 740 (787)
.++||||+++++|.+++...... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999653321 12458899999999999999999998 89999999999999984 446999
Q ss_pred eecccceecCCCCC-ceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 741 ADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 741 ~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+|||+++....... .......||+.|+|||++.+..++ ++||||.
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 231 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 231 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHH
Confidence 99999975533221 112235679999999999988888 9999983
No 274
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2e-27 Score=265.51 Aligned_cols=247 Identities=15% Similarity=0.162 Sum_probs=175.4
Q ss_pred CcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccC
Q 003911 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (787)
Q Consensus 94 L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (787)
...++.+++.++.++..+. ++|++|+|++|+|+++++..|.++++|++|+|++|+|+. ..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ-IEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCC-cChhhccCcccCCEEECCC
Confidence 4578888899987766554 688999999999999988889999999999998888875 3345666666666666666
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccc
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (787)
|+|++..+..|. .+++|++|+|++|++++..+..
T Consensus 133 n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~-------------------------------------------- 166 (452)
T 3zyi_A 133 NWLTVIPSGAFE--YLSKLRELWLRNNPIESIPSYA-------------------------------------------- 166 (452)
T ss_dssp SCCSBCCTTTSS--SCTTCCEEECCSCCCCEECTTT--------------------------------------------
T ss_pred CcCCccChhhhc--ccCCCCEEECCCCCcceeCHhH--------------------------------------------
Confidence 666655555553 5555555555555555333322
Q ss_pred cCCCCCCCCCCCCEEecCC-CcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCch
Q 003911 254 GPLPDFSGVKQLESLSLRD-NFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPR 332 (787)
Q Consensus 254 ~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~ 332 (787)
|..+++|+.|+|++ |.+....+..|..+++|++|+|++|++++. |.+.
T Consensus 167 -----~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~------------------------- 215 (452)
T 3zyi_A 167 -----FNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLT------------------------- 215 (452)
T ss_dssp -----TTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCT-------------------------
T ss_pred -----HhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-cccc-------------------------
Confidence 44445555555555 233322223455566666666666655533 2111
Q ss_pred hhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCc
Q 003911 333 LNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPE 412 (787)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~ 412 (787)
...+|+.|+|++|++++..|..|..+++|+.|+|++|++++..|.
T Consensus 216 -----------------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 260 (452)
T 3zyi_A 216 -----------------------------------PLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERN 260 (452)
T ss_dssp -----------------------------------TCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTT
T ss_pred -----------------------------------ccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHH
Confidence 113566777777777777788899999999999999999999999
Q ss_pred cCcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCCCCCCCC
Q 003911 413 GLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (787)
Q Consensus 413 ~l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~~~~~~~ 455 (787)
.|..+++|++|||++|+|++.++. +..+..+.+.+||+.|...
T Consensus 261 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 261 AFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred HhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 999999999999999999977664 5667889999999998765
No 275
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.95 E-value=6.8e-29 Score=267.67 Aligned_cols=189 Identities=22% Similarity=0.398 Sum_probs=160.0
Q ss_pred hcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccch---------------hHHHHHHHHHHHHhcCCCccce
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGK---------------GLTEFKSEIAVLTKVRHRHLVA 655 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~ 655 (787)
..++|++.+.||+|+||.||+|+. +++.||||++........ ..+.+.+|++++++++||||++
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 357899999999999999999988 899999999976432211 1278999999999999999999
Q ss_pred EEeEEEeCCeeEEEEEecCCCCHHHHHHhh---hhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 003911 656 LLGHCLDGNEKLLVFEYMPQGTLSRHIFNW---AEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL 732 (787)
Q Consensus 656 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 732 (787)
+++++.+.+..++||||+++|+|.+++... .......+++..+..++.|++.||+|||+ ..+|+||||||+||++
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILM 185 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEE
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEE
Confidence 999999999999999999999998873210 11124578999999999999999999996 3799999999999999
Q ss_pred CCCCcEEEeecccceecCCCCCceeeeeccccCcccccccccC-CcC--cceeecC
Q 003911 733 GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHT-RWS--SCSYWAG 785 (787)
Q Consensus 733 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~--~~DiWS~ 785 (787)
+.++.+||+|||.+...... ......||+.|+|||++.+. .++ ++|+||.
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~sl 238 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHH
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHH
Confidence 99999999999999876443 23346789999999999887 554 7999983
No 276
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.95 E-value=5.3e-29 Score=274.13 Aligned_cols=186 Identities=29% Similarity=0.432 Sum_probs=139.3
Q ss_pred cCCCcc-cceeccccceEEEEEEEe---CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe--CCe
Q 003911 592 TNNFSE-ENILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD--GNE 665 (787)
Q Consensus 592 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~ 665 (787)
.+.|++ .++||+|+||.||+|+.. +++.||||++..... ...+.+|++++++++||||+++++++.. ...
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 345665 458999999999999875 578999999975322 3468899999999999999999999965 668
Q ss_pred eEEEEEecCCCCHHHHHHhhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----CCCCc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEE----GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMR 737 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~ 737 (787)
.++||||++ |+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCc
Confidence 899999996 5888887543322 12358999999999999999999998 899999999999999 67789
Q ss_pred EEEeecccceecCCCCC--ceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 738 AKVADFGLVRLAPEGKG--SIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 738 ~kl~DFG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
+||+|||+|+....... ......+||+.|+|||++.+. .++ ++||||.
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl 222 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI 222 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHH
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHH
Confidence 99999999987654321 122346799999999999875 477 8999983
No 277
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.95 E-value=1.1e-28 Score=258.27 Aligned_cols=186 Identities=28% Similarity=0.424 Sum_probs=160.0
Q ss_pred hhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEE
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 668 (787)
.+.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 45578999999999999999999876 78999999998765555667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC---CcEEEeeccc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVADFGL 745 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~ 745 (787)
||||+++++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.+ +.+||+|||+
T Consensus 99 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 99 VGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 99999999999888542 368999999999999999999998 899999999999999754 4799999999
Q ss_pred ceecCCCCCceeeeeccccCcccccccccCCcCcceeecC
Q 003911 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWSSCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiWS~ 785 (787)
+........ .....||+.|+|||++.+....++|+||.
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~Di~sl 208 (287)
T 2wei_A 171 STCFQQNTK--MKDRIGTAYYIAPEVLRGTYDEKCDVWSA 208 (287)
T ss_dssp GGTBCCCSS--CSCHHHHHTTCCHHHHTTCCCTHHHHHHH
T ss_pred ceeecCCCc--cccccCcccccChHHhcCCCCCchhhHhH
Confidence 986644322 22346899999999988763338999983
No 278
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.95 E-value=2.6e-29 Score=265.24 Aligned_cols=190 Identities=25% Similarity=0.433 Sum_probs=141.1
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+++.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 568999999999999999999754 78999999986532 2334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 671 EYMPQGTLSRHIFNWAEE---GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
||+++++|.+++...... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998654322 23468999999999999999999998 899999999999999999999999999987
Q ss_pred ecCCCCC----ceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 748 LAPEGKG----SIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
....... .......||+.|+|||++.+ ..++ ++|+||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 213 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 213 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHH
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHH
Confidence 6543221 11233579999999999876 4556 8999983
No 279
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.95 E-value=1.8e-28 Score=268.38 Aligned_cols=181 Identities=23% Similarity=0.420 Sum_probs=148.0
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe------
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE------ 665 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 665 (787)
..+|++.+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 457999999999999999999987777799998865321 22379999999999999999999965433
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEC-CCCcEEEeecc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFG 744 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG 744 (787)
.++||||+++ ++.+.+..... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||
T Consensus 113 ~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 113 LNLVLEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 7899999976 45444433322 23578999999999999999999998 8999999999999999 79999999999
Q ss_pred cceecCCCCCceeeeeccccCcccccccccC-CcC-cceeecC
Q 003911 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVHT-RWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~DiWS~ 785 (787)
+|+....... .....||+.|+|||++.+. .++ ++||||.
T Consensus 188 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 228 (394)
T 4e7w_A 188 SAKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWST 228 (394)
T ss_dssp TCEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred CcccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHH
Confidence 9987754432 2345789999999999775 466 8999983
No 280
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.95 E-value=2.5e-28 Score=262.03 Aligned_cols=181 Identities=28% Similarity=0.454 Sum_probs=156.0
Q ss_pred hcCCCcccceeccccceEEEEEEE-e-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCc------cceEEeEEEe
Q 003911 591 VTNNFSEENILGRGGFGTVYKGEL-H-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH------LVALLGHCLD 662 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~ 662 (787)
+.++|++.+.||+|+||.||+|.. . +++.||||+++.. ....+.+.+|+++++.++|++ |+++++++..
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 457899999999999999999986 3 6889999998652 345677899999999987654 9999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC--------
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-------- 734 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------- 734 (787)
.+..++||||+ +++|.+++.. .....+++.++..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC
T ss_pred CCcEEEEEcCC-CCCHHHHHHh---cCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccC
Confidence 99999999999 8999998854 223468899999999999999999998 89999999999999987
Q ss_pred -----------CCcEEEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 735 -----------DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 735 -----------~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++.+||+|||+++...... ....||+.|+|||++.+..++ ++|+||.
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 220 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSI 220 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHH
T ss_pred CccccccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHH
Confidence 6689999999998764332 335789999999999998888 8999983
No 281
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.95 E-value=2e-28 Score=264.60 Aligned_cols=184 Identities=28% Similarity=0.449 Sum_probs=153.6
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC-----C
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----N 664 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~ 664 (787)
+.++|++.+.||+|+||.||+|... +|+.||||++... .......++.+|++++++++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 4578999999999999999999876 6899999999652 2344566788999999999999999999988754 6
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
..++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecc
Confidence 7899999996 689888743 368999999999999999999998 899999999999999999999999999
Q ss_pred cceecCCCCCc---------eeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 745 LVRLAPEGKGS---------IETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
+++........ ......||+.|+|||++.+ ..++ ++|+||.
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 209 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC 209 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHH
Confidence 99876533211 1123578999999998765 5667 8999983
No 282
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.95 E-value=1.4e-28 Score=270.36 Aligned_cols=181 Identities=26% Similarity=0.356 Sum_probs=153.6
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC--------CCccceEEeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--------HRHLVALLGHCL 661 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~ 661 (787)
+.++|++.+.||+|+||.||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||+++++++.
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 3578999999999999999999765 6899999999752 344578899999999995 788999999988
Q ss_pred ----eCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEcCCCCCCEEECCCC
Q 003911 662 ----DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDM 736 (787)
Q Consensus 662 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~-~ivH~Dlkp~NIll~~~~ 736 (787)
.....++||||+ ++++.+++.. .....+++..++.++.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccc
Confidence 456789999999 6677776644 223468999999999999999999998 6 999999999999999775
Q ss_pred -------------------------------------------------cEEEeecccceecCCCCCceeeeeccccCcc
Q 003911 737 -------------------------------------------------RAKVADFGLVRLAPEGKGSIETRIAGTFGYL 767 (787)
Q Consensus 737 -------------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~ 767 (787)
.+||+|||+++..... ....+||+.|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~ 260 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYR 260 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGC
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCccc
Confidence 7999999999876543 23357899999
Q ss_pred cccccccCCcC-cceeecC
Q 003911 768 APEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 768 aPE~~~~~~~~-~~DiWS~ 785 (787)
|||++.+..++ ++||||.
T Consensus 261 aPE~~~~~~~~~~~Diwsl 279 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWST 279 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHH
T ss_pred CChhhcCCCCCcHHHHHHH
Confidence 99999998888 8999983
No 283
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.95 E-value=3.9e-29 Score=269.92 Aligned_cols=180 Identities=13% Similarity=0.191 Sum_probs=152.1
Q ss_pred cCCCcccceeccccceEEEEEEEeC---------CcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccce-------
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHD---------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA------- 655 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------- 655 (787)
.++|++.+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 3689999999999999999998753 789999998753 36789999999999999998
Q ss_pred --------EEeEEEe-CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 003911 656 --------LLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 726 (787)
Q Consensus 656 --------~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 726 (787)
+++++.. .+..++||||+ +++|.+++.... ...+++.+++.++.|++.||+|||+ .+|+|||||
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dik 186 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVT 186 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCC
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCC
Confidence 6777776 67889999999 999999996531 2468999999999999999999998 899999999
Q ss_pred CCCEEECCCC--cEEEeecccceecCCCCCc------eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 727 PSNILLGDDM--RAKVADFGLVRLAPEGKGS------IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 727 p~NIll~~~~--~~kl~DFG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|+||+++.++ .+||+|||+++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 254 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSL 254 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHH
Confidence 9999999988 8999999999866432211 11334799999999999998888 9999983
No 284
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.95 E-value=2.4e-28 Score=258.17 Aligned_cols=188 Identities=22% Similarity=0.355 Sum_probs=153.6
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc--chhHHHHHHHHHHHHhcCCCccceEEeEEE--eCCe
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS--GKGLTEFKSEIAVLTKVRHRHLVALLGHCL--DGNE 665 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~ 665 (787)
..++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4578999999999999999999864 6899999999764322 244678999999999999999999999985 4457
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 745 (787)
.++||||++++ +.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccc
Confidence 89999999876 77776442 23468999999999999999999998 8999999999999999999999999999
Q ss_pred ceecCCCCC-ceeeeeccccCcccccccccCCc--C-cceeecC
Q 003911 746 VRLAPEGKG-SIETRIAGTFGYLAPEYAVHTRW--S-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~--~-~~DiWS~ 785 (787)
+........ .......||+.|+|||++.+... + ++|+||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~sl 199 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSA 199 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHH
T ss_pred ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHH
Confidence 987654322 22234568999999999987543 4 8999983
No 285
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.95 E-value=2.6e-28 Score=256.68 Aligned_cols=183 Identities=21% Similarity=0.344 Sum_probs=154.4
Q ss_pred hcCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEE-EeCCeeEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC-LDGNEKLL 668 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~l 668 (787)
..++|++.+.||+|+||.||+|+. .+++.||||++..... .+++.+|++++++++|++++..+.++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 457899999999999999999986 4799999999876332 24688999999999988876666555 56777899
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---CCCCcEEEeeccc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 745 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~ 745 (787)
||||+ +++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 99999 9999999853 22468999999999999999999998 899999999999999 4888999999999
Q ss_pred ceecCCCCCc------eeeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGS------IETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++........ ......||+.|+|||++.+..++ ++||||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 201 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESL 201 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHH
Confidence 9877654321 12345799999999999998888 9999983
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.7e-27 Score=248.93 Aligned_cols=177 Identities=18% Similarity=0.221 Sum_probs=121.5
Q ss_pred cEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCc
Q 003911 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSA 174 (787)
Q Consensus 95 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n 174 (787)
+.++.+++.++.++..+ .++|++|+|++|+++++++..|.++++|++|+|++|+++. ..|..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR-IDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccce-eCHhhcCCccCCCEEeCCCC
Confidence 67888888888765544 3678888888888888888888888888888888888875 34667777777777777777
Q ss_pred e-ecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccc
Q 003911 175 N-ITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (787)
Q Consensus 175 ~-l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (787)
. ++...|..|. .+++|++|+|++|++++..|..+. ++++|++|+|++|+++
T Consensus 91 ~~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~--------------------------~l~~L~~L~l~~n~l~ 142 (285)
T 1ozn_A 91 AQLRSVDPATFH--GLGRLHTLHLDRCGLQELGPGLFR--------------------------GLAALQYLYLQDNALQ 142 (285)
T ss_dssp TTCCCCCTTTTT--TCTTCCEEECTTSCCCCCCTTTTT--------------------------TCTTCCEEECCSSCCC
T ss_pred CCccccCHHHhc--CCcCCCEEECCCCcCCEECHhHhh--------------------------CCcCCCEEECCCCccc
Confidence 5 6665566664 667777777777777655554433 5666666666666666
Q ss_pred cCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccccc
Q 003911 254 GPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 254 ~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
+.++. +..+++|++|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 143 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred ccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 65553 55666666666666666644444566666666666666655544
No 287
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.95 E-value=5.9e-29 Score=262.50 Aligned_cols=185 Identities=25% Similarity=0.433 Sum_probs=152.5
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
..++|++.+.||+|+||.||+|+.. +++.||+|++... .....+++.+|++++++++||||+++++++...+..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 4568999999999999999999876 6899999998753 234567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 95 ~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 9999999999888542 2468999999999999999999998 89999999999999999999999999987543
Q ss_pred CCCCCceeeeeccccCcccccccc-----cCCcC-cceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAV-----HTRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~-~~DiWS~ 785 (787)
.... .......||+.|+|||++. +..++ ++|+||.
T Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 208 (302)
T 2j7t_A 168 LKTL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 208 (302)
T ss_dssp HHHH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHH
T ss_pred cccc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHH
Confidence 2111 1112356899999999984 55666 8999983
No 288
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.95 E-value=8.3e-29 Score=258.03 Aligned_cols=179 Identities=32% Similarity=0.533 Sum_probs=147.3
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeC-CeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-NEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|+.. ++.||||+++.. ...+++.+|++++++++||||+++++++... +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 357999999999999999999874 899999998753 2457899999999999999999999997654 4689999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+++++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp CCCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred ecCCCCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999865322 247889999999999999999998 899999999999999999999999999998654
Q ss_pred CCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
... ....+++.|+|||++.+..++ ++|+||.
T Consensus 169 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 200 (278)
T 1byg_A 169 STQ----DTGKLPVKWTAPEALREKKFSTKSDVWSF 200 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCCCHHHHHHHH
T ss_pred ccc----cCCCccccccCHHHhCCCCCCchhcHHHH
Confidence 322 223578999999999988888 8999983
No 289
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.95 E-value=1.8e-28 Score=265.60 Aligned_cols=189 Identities=24% Similarity=0.346 Sum_probs=143.9
Q ss_pred HHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 587 VLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 587 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
......++|++.+.||+|+||.||+|+.. +++.||||++.... ....++.+|++.++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 34556689999999999999999999875 68999999986532 223456778888999999999999999976433
Q ss_pred -------eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEEcCCCCCCEEECC-C
Q 003911 666 -------KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH--GLAHQSFIHRDLKPSNILLGD-D 735 (787)
Q Consensus 666 -------~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~ 735 (787)
.++||||+++ +|.+.+..... ....+++..+..++.|++.||+||| + .+|+||||||+|||++. +
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCC
Confidence 7899999975 66665544332 2356889999999999999999999 6 89999999999999996 8
Q ss_pred CcEEEeecccceecCCCCCceeeeeccccCcccccccccCC-cC-cceeecC
Q 003911 736 MRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTR-WS-SCSYWAG 785 (787)
Q Consensus 736 ~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~DiWS~ 785 (787)
+.+||+|||+++....... .....||+.|+|||++.+.. ++ ++||||.
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 218 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSV 218 (360)
T ss_dssp TEEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred CcEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHH
Confidence 9999999999987754332 23457899999999987654 66 8999983
No 290
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=265.19 Aligned_cols=180 Identities=24% Similarity=0.417 Sum_probs=151.9
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe----
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE---- 665 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 665 (787)
+.++|.+.+.||+|+||.||+|... +|+.||||++..........+++.+|+.++++++||||+++++++.....
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3568999999999999999999875 79999999997755455566789999999999999999999999987654
Q ss_pred --eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 666 --KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 666 --~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
.++||||++ ++|.+++. ..+++.++..++.||+.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECST
T ss_pred eeEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeec
Confidence 499999996 68877652 258999999999999999999998 89999999999999999999999999
Q ss_pred ccceecCCCCCceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
|+++..... .....||+.|+|||++.+ ..++ ++|+||.
T Consensus 171 g~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~sl 210 (353)
T 3coi_A 171 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSV 210 (353)
T ss_dssp TCTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHH
T ss_pred ccccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHH
Confidence 999865432 234578999999999987 5666 8999983
No 291
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4e-30 Score=272.51 Aligned_cols=263 Identities=16% Similarity=0.194 Sum_probs=210.9
Q ss_pred CCCCC-CCCCcccEEEc-CCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCC-CCCC-CCC-------CCCCCc
Q 003911 50 GWSDT-DPCKWNHVVCI-EDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSIS-GPLP-SLN-------GLASLE 118 (787)
Q Consensus 50 ~w~~~-~~C~w~gv~C~-~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~-~~~-------~l~~L~ 118 (787)
+|... .|+.+..+... ...+++.|++++|++ .+|..+... |++|+|++|+|+ +.+| .+. ++++|+
T Consensus 23 ~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~ 98 (312)
T 1wwl_A 23 DWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQ 98 (312)
T ss_dssp CGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCC
T ss_pred chHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCcc
Confidence 56543 45566655432 234688899999999 788777655 999999999994 4455 343 699999
Q ss_pred EEEcccccCCcCCCccc--cCCCCCcEEEccCCCCCCCCCChhhhcC-----CCCCEEeccCceecccCCCCCCCCCCCC
Q 003911 119 VVMLSNNQFTSVPSDFF--TGLSSLQSIEIDNNPFSSWEIPQSLRNA-----SGLQNFSANSANITGQIPSFFGPDEFPG 191 (787)
Q Consensus 119 ~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~~~l~~ 191 (787)
+|+|++|++++..|..+ ..+++|++|+|++|++++ +|..+..+ ++|++|++++|++++..|..|+ .+++
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~--~l~~ 174 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT--RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVR--VFPA 174 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSS--SSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCC--CCSS
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcc--hhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhc--cCCC
Confidence 99999999997666654 899999999999999995 48888887 9999999999999999989887 8999
Q ss_pred CcEEeccccccccCC--CcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC---C-CCCCCCC
Q 003911 192 LTILHLAFNQLIGGL--PASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP---D-FSGVKQL 265 (787)
Q Consensus 192 L~~L~L~~N~l~~~~--p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~-~~~l~~L 265 (787)
|++|+|++|++.+.+ |..+. ++++++|++|+|++|+|++.+. . +..+++|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 230 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALC------------------------PLKFPTLQVLALRNAGMETPSGVCSALAAARVQL 230 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSC------------------------TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCC
T ss_pred CCEEECCCCCcCcchHHHHHHH------------------------hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCC
Confidence 999999999987642 22221 2478999999999999984322 2 4578999
Q ss_pred CEEecCCCcccccCC-ccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhC
Q 003911 266 ESLSLRDNFFTGPVP-DSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMG 344 (787)
Q Consensus 266 ~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~ 344 (787)
++|+|++|+|++.+| ..+..+++|++|+|++|+|+..++.+.
T Consensus 231 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~------------------------------------- 273 (312)
T 1wwl_A 231 QGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP------------------------------------- 273 (312)
T ss_dssp SEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC-------------------------------------
T ss_pred CEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc-------------------------------------
Confidence 999999999998775 556778999999999999984333211
Q ss_pred CChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccc
Q 003911 345 YPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSG 408 (787)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 408 (787)
++|+.|+|++|++++. |. +..+++|++|+|++|++++
T Consensus 274 -------------------------~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -------------------------AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -------------------------SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -------------------------CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 3799999999999987 65 9999999999999999985
No 292
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.95 E-value=7.7e-29 Score=263.03 Aligned_cols=189 Identities=22% Similarity=0.321 Sum_probs=154.8
Q ss_pred HHHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC--CCccceEEeEEEeCC
Q 003911 587 VLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDGN 664 (787)
Q Consensus 587 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~ 664 (787)
.+....++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++...+
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 101 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ 101 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC
Confidence 333445679999999999999999998888999999999876555666788999999999997 599999999999999
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
..++||| +.+++|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||++++ +.+||+|||
T Consensus 102 ~~~lv~e-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 102 YIYMVME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp EEEEEEC-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred EEEEEEe-cCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeecc
Confidence 9999999 558899999854 2468899999999999999999998 89999999999999965 899999999
Q ss_pred cceecCCCCCc-eeeeeccccCccccccccc-----------CCcC-cceeecC
Q 003911 745 LVRLAPEGKGS-IETRIAGTFGYLAPEYAVH-----------TRWS-SCSYWAG 785 (787)
Q Consensus 745 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~-~~DiWS~ 785 (787)
+++........ ......||+.|+|||++.+ ..++ ++||||.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~sl 225 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHH
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHH
Confidence 99876543221 1234568999999999876 3566 8999983
No 293
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.95 E-value=1.7e-28 Score=284.95 Aligned_cols=187 Identities=22% Similarity=0.358 Sum_probs=154.6
Q ss_pred hhcCCCcccceeccccceEEEEEEEe----CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe
Q 003911 590 NVTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (787)
Q Consensus 590 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 665 (787)
...++|++.+.||+|+||.||+|.+. .+..||+|+++.. ......+.+.+|+.++++++||||+++++++. .+.
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 34568999999999999999999874 2567999988653 23445678999999999999999999999985 456
Q ss_pred eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeeccc
Q 003911 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (787)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 745 (787)
.++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 465 ~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp CEEEEECCTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred eEEEEEcCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCC
Confidence 8999999999999999854 22468999999999999999999998 8999999999999999999999999999
Q ss_pred ceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++..............||+.|+|||++.+..++ ++||||.
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSl 578 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHH
Confidence 987755433333345578899999999988888 8999983
No 294
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.8e-28 Score=261.47 Aligned_cols=186 Identities=26% Similarity=0.342 Sum_probs=141.4
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEe-------
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLD------- 662 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~------- 662 (787)
..+|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++++. ||||+++++++..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 357999999999999999999875 7899999998653 3445678899999999996 9999999999952
Q ss_pred -CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEcCCCCCCEEECCCCcEE
Q 003911 663 -GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAK 739 (787)
Q Consensus 663 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~k 739 (787)
....++||||++ |+|.+++..... ...+++.+++.++.|++.||+|||+ .+ |+||||||+||+++.++.+|
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEE
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEE
Confidence 345789999995 799998865433 3468999999999999999999997 67 99999999999999999999
Q ss_pred EeecccceecCCCCCce-----------eeeeccccCccccccc---ccCCcC-cceeecC
Q 003911 740 VADFGLVRLAPEGKGSI-----------ETRIAGTFGYLAPEYA---VHTRWS-SCSYWAG 785 (787)
Q Consensus 740 l~DFG~a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~-~~DiWS~ 785 (787)
|+|||+++......... .....||+.|+|||++ .+..++ ++||||.
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~sl 239 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWAL 239 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHH
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHH
Confidence 99999998765432211 1134689999999998 556677 8999983
No 295
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.95 E-value=2.5e-28 Score=260.80 Aligned_cols=187 Identities=24% Similarity=0.356 Sum_probs=136.8
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHH-HHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIA-VLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|... +++.||||++.... ......++..|+. +++.++||||+++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 368999999999999999999875 78999999997643 2334455566665 66777999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
|||+++ +|.+++..........+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999975 88888765443334678999999999999999999998 6 999999999999999999999999999987
Q ss_pred cCCCCCceeeeeccccCccccccc----ccCCcC-cceeecC
Q 003911 749 APEGKGSIETRIAGTFGYLAPEYA----VHTRWS-SCSYWAG 785 (787)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~-~~DiWS~ 785 (787)
..... ......||+.|+|||++ .+..++ ++||||.
T Consensus 176 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~sl 215 (327)
T 3aln_A 176 LVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSL 215 (327)
T ss_dssp --------------------------------CCSHHHHHHH
T ss_pred ccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHH
Confidence 64432 22334689999999998 455566 8999983
No 296
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.95 E-value=1.3e-28 Score=258.24 Aligned_cols=185 Identities=29% Similarity=0.495 Sum_probs=146.9
Q ss_pred CCCcccceeccccceEEEEEEEe--CCc--EEEEEEeecccc-cchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeE
Q 003911 593 NNFSEENILGRGGFGTVYKGELH--DGT--KIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 667 (787)
++|++.+.||+|+||.||+|++. +++ .||||+++.... .....+++.+|++++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57999999999999999999864 233 689999876433 2455678999999999999999999999998765 88
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 97 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccc
Confidence 9999999999999986532 358899999999999999999998 899999999999999999999999999998
Q ss_pred ecCCCCCce--eeeeccccCcccccccccCCcC-cceeecC
Q 003911 748 LAPEGKGSI--ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
......... .....+|+.|+|||++.+..++ ++|+||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 210 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHH
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHH
Confidence 875543221 1234578899999999988888 8999983
No 297
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.2e-28 Score=280.64 Aligned_cols=174 Identities=20% Similarity=0.221 Sum_probs=126.8
Q ss_pred eeccccceEEEEEE-EeCCcEEEEEEeecccc--------cchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEEE
Q 003911 600 ILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVI--------SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 600 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 669 (787)
..+.|+.|.+..++ ...|+.||||++.+... .....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 46677777777764 44799999999976421 123456799999999999 799999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||++|++|.+++.. ..+++.. +|+.||+.||+|+|+ +|||||||||+|||+++++++||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 999999999999953 2356654 588999999999998 89999999999999999999999999999877
Q ss_pred CCCCCceeeeeccccCcccccccccCCcCcceeecC
Q 003911 750 PEGKGSIETRIAGTFGYLAPEYAVHTRWSSCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiWS~ 785 (787)
..... .....+||+.|||||++.+....++|+||.
T Consensus 390 ~~~~~-~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~ 424 (569)
T 4azs_A 390 PQDCS-WPTNLVQSFFVFVNELFAENKSWNGFWRSA 424 (569)
T ss_dssp C---C-CSHHHHHHHHHHHHHHC-------------
T ss_pred CCCCc-cccCceechhhccHHHhCCCCCCccccccc
Confidence 54432 234478999999999998876668999984
No 298
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.95 E-value=5.1e-28 Score=264.13 Aligned_cols=186 Identities=24% Similarity=0.313 Sum_probs=156.3
Q ss_pred HHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CC-----ccceEEeEE
Q 003911 588 LRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HR-----HLVALLGHC 660 (787)
Q Consensus 588 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~ 660 (787)
...+.++|++.+.||+|+||.||+|... +++.||||+++.. .....++..|+++++.++ |+ +|+++++++
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~ 125 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF 125 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence 3445679999999999999999999876 6889999999752 334567888999998885 55 499999999
Q ss_pred EeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEC--CCCcE
Q 003911 661 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG--DDMRA 738 (787)
Q Consensus 661 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~ 738 (787)
...+..++||||++ |+|.+++... ....+++..+..++.|++.||+|||+. +.+|+||||||+|||++ .++.+
T Consensus 126 ~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~ 200 (382)
T 2vx3_A 126 MFRNHLCLVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAI 200 (382)
T ss_dssp EETTEEEEEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCE
T ss_pred ccCCceEEEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcE
Confidence 99999999999995 5999988652 224589999999999999999999952 37999999999999995 57789
Q ss_pred EEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 739 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 739 kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
||+|||+|+...... ....||+.|+|||++.+..++ ++||||.
T Consensus 201 kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSl 244 (382)
T 2vx3_A 201 KIVDFGSSCQLGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSL 244 (382)
T ss_dssp EECCCTTCEETTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred EEEeccCceeccccc----ccccCCccccChHHHcCCCCCcHHHHHHH
Confidence 999999998875432 335789999999999999888 8999983
No 299
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.95 E-value=1.7e-28 Score=261.18 Aligned_cols=189 Identities=27% Similarity=0.370 Sum_probs=158.1
Q ss_pred HHHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc----hhHHHHHHHHHHHHhcC--CCccceEEe
Q 003911 586 QVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVR--HRHLVALLG 658 (787)
Q Consensus 586 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~niv~~~~ 658 (787)
+......++|++.+.||+|+||.||+|... +++.||||++....... ...+.+.+|++++++++ ||||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 344556788999999999999999999864 78999999997654322 22356778999999996 599999999
Q ss_pred EEEeCCeeEEEEEecCC-CCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEC-CCC
Q 003911 659 HCLDGNEKLLVFEYMPQ-GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDM 736 (787)
Q Consensus 659 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 736 (787)
++...+..++||||+.+ ++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~ 187 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRG 187 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTT
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCC
Confidence 99999999999999976 899998854 2468899999999999999999998 8999999999999999 788
Q ss_pred cEEEeecccceecCCCCCceeeeeccccCcccccccccCCc-C-cceeecC
Q 003911 737 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRW-S-SCSYWAG 785 (787)
Q Consensus 737 ~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~-~~DiWS~ 785 (787)
.+||+|||+++...... .....||+.|+|||++.+..+ + ++|+||.
T Consensus 188 ~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 235 (320)
T 3a99_A 188 ELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235 (320)
T ss_dssp EEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHH
T ss_pred CEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhH
Confidence 99999999998775432 233569999999999988776 4 7899983
No 300
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.2e-28 Score=286.86 Aligned_cols=178 Identities=22% Similarity=0.350 Sum_probs=151.8
Q ss_pred hcCCCcccceeccccceEEEEEEEe--CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCe---
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH--DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE--- 665 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 665 (787)
+.++|++.+.||+|+||.||+|.+. +++.||||++... ........+.+|++++++++||||+++++++...+.
T Consensus 78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 3478999999999999999999875 5899999998653 234456788999999999999999999999987655
Q ss_pred --eEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeec
Q 003911 666 --KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (787)
Q Consensus 666 --~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 743 (787)
.|+||||+++++|.+++. ..+++.+++.++.||+.||+|||+ .+||||||||+|||++++ .+||+||
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp EEEEEEEECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCC
T ss_pred ceeEEEEEeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEec
Confidence 699999999999988762 268999999999999999999998 899999999999999875 8999999
Q ss_pred ccceecCCCCCceeeeeccccCcccccccccCCcCcceeecC
Q 003911 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWSSCSYWAG 785 (787)
Q Consensus 744 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiWS~ 785 (787)
|+++..... ....||+.|+|||++.+....++||||-
T Consensus 226 G~a~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~sDi~sl 262 (681)
T 2pzi_A 226 GAVSRINSF-----GYLYGTPGFQAPEIVRTGPTVATDIYTV 262 (681)
T ss_dssp TTCEETTCC-----SCCCCCTTTSCTTHHHHCSCHHHHHHHH
T ss_pred ccchhcccC-----CccCCCccccCHHHHcCCCCCceehhhh
Confidence 999877543 2356999999999998776449999983
No 301
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.95 E-value=4.7e-28 Score=257.74 Aligned_cols=183 Identities=23% Similarity=0.421 Sum_probs=146.5
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEE--------
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL-------- 661 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------- 661 (787)
..++|++.+.||+|+||.||+|... +++.||+|++... .....+++.+|++++++++||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 3578999999999999999999876 5899999998753 3455678999999999999999999999874
Q ss_pred ------eCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEC-C
Q 003911 662 ------DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-D 734 (787)
Q Consensus 662 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~ 734 (787)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ +
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~ 156 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTE 156 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCC
Confidence 3467899999997 699988832 468899999999999999999998 8999999999999997 5
Q ss_pred CCcEEEeecccceecCCCCC--ceeeeeccccCccccccccc-CCcC-cceeecC
Q 003911 735 DMRAKVADFGLVRLAPEGKG--SIETRIAGTFGYLAPEYAVH-TRWS-SCSYWAG 785 (787)
Q Consensus 735 ~~~~kl~DFG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~-~~DiWS~ 785 (787)
++.+||+|||+++....... .......||+.|+|||++.+ ..++ ++|+||.
T Consensus 157 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 211 (320)
T 2i6l_A 157 DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA 211 (320)
T ss_dssp TTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHH
T ss_pred CCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhH
Confidence 67999999999987643221 11223467999999998876 5666 8999983
No 302
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.95 E-value=1.2e-27 Score=267.00 Aligned_cols=183 Identities=21% Similarity=0.326 Sum_probs=154.7
Q ss_pred hcCCCcccceeccccceEEEEEEE-eCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCC-CccceEEeEEEeCCeeEE
Q 003911 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH-RHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~l 668 (787)
+.++|++.+.||+|+||.||+|+. .+++.||||++..... ..++.+|+++++.++| ++|..+..++...+..++
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 457899999999999999999986 4799999998875432 2357899999999976 566667777778888999
Q ss_pred EEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---CCCCcEEEeeccc
Q 003911 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 745 (787)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~ 745 (787)
||||+ +++|.+++... ...+++.+++.|+.||+.||+|||+ .+||||||||+|||+ ++++.+||+|||+
T Consensus 81 vme~~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEECC-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 99999 99999998532 2468999999999999999999998 899999999999999 5889999999999
Q ss_pred ceecCCCCCce------eeeeccccCcccccccccCCcC-cceeecC
Q 003911 746 VRLAPEGKGSI------ETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 746 a~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
++......... .....||+.|+|||++.+..++ ++||||.
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSl 199 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESL 199 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHH
Confidence 98776543211 1246799999999999999998 8999983
No 303
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=260.47 Aligned_cols=188 Identities=27% Similarity=0.388 Sum_probs=148.8
Q ss_pred HHHhhcCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccc----hhHHHHHHHHHHHHhc----CCCccceEE
Q 003911 587 VLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKV----RHRHLVALL 657 (787)
Q Consensus 587 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~niv~~~ 657 (787)
+.....++|++.+.||+|+||.||+|+.. +++.||||++....... .....+.+|+++++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34456678999999999999999999764 78999999997643221 1233466899999999 899999999
Q ss_pred eEEEeCCeeEEEEEe-cCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEC-CC
Q 003911 658 GHCLDGNEKLLVFEY-MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DD 735 (787)
Q Consensus 658 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~ 735 (787)
+++...+..++|||| +++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++ ++
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRR 176 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTT
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCC
Confidence 999999999999999 7899999998541 358999999999999999999998 8999999999999999 88
Q ss_pred CcEEEeecccceecCCCCCceeeeeccccCcccccccccCCcC--cceeecC
Q 003911 736 MRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS--SCSYWAG 785 (787)
Q Consensus 736 ~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~DiWS~ 785 (787)
+.+||+|||+++...... .....||+.|+|||++.+..+. ++|+||.
T Consensus 177 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 225 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSL 225 (312)
T ss_dssp TEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHH
T ss_pred CeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHH
Confidence 999999999998775432 2345689999999999877764 7999983
No 304
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.95 E-value=1.3e-27 Score=258.34 Aligned_cols=181 Identities=26% Similarity=0.438 Sum_probs=154.2
Q ss_pred hcCCCcccceeccccceEEEEEEEe-CC-cEEEEEEeecccccchhHHHHHHHHHHHHhcCCCc------cceEEeEEEe
Q 003911 591 VTNNFSEENILGRGGFGTVYKGELH-DG-TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH------LVALLGHCLD 662 (787)
Q Consensus 591 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~ 662 (787)
+.++|++.+.||+|+||.||+|... ++ +.||+|+++. .....+.+.+|++++++++|++ ++.+++++..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 4578999999999999999999875 44 7899999865 2344577889999999997766 9999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----------
Q 003911 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---------- 732 (787)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---------- 732 (787)
.+..++||||+ ++++.+++.. .....+++.++..++.||+.||+|||+ .+|+||||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEEC
T ss_pred CCeEEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccc
Confidence 99999999999 6777777754 223468999999999999999999997 899999999999999
Q ss_pred ---------CCCCcEEEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 733 ---------GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 733 ---------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
+.++.+||+|||+++...... ....||+.|+|||++.+..++ ++|+||.
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 225 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSI 225 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred ccccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHH
Confidence 567899999999998754332 335799999999999998888 8999983
No 305
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.95 E-value=1e-27 Score=256.83 Aligned_cols=180 Identities=25% Similarity=0.372 Sum_probs=130.5
Q ss_pred hcCCCcccc-eeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe----CC
Q 003911 591 VTNNFSEEN-ILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GN 664 (787)
Q Consensus 591 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~ 664 (787)
+.++|++.+ .||+|+||.||+|... +++.||||++... . ....+....++.++||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---P---KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 456898854 6999999999999876 7999999998652 1 122223334566799999999999976 44
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC---CCcEEEe
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 741 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 741 (787)
..++||||+++|+|.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQE---RGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHT---C-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred eEEEEEeccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEe
Confidence 57999999999999999864 222468999999999999999999998 89999999999999976 4559999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|||+++...... .....||+.|+|||++.+..++ ++||||.
T Consensus 174 Dfg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 215 (336)
T 3fhr_A 174 DFGFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 215 (336)
T ss_dssp CCTTCEEC-------------------------CHHHHHHHHHHH
T ss_pred ccccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHH
Confidence 999998765332 2335689999999999888888 8999983
No 306
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=8.6e-29 Score=278.22 Aligned_cols=218 Identities=21% Similarity=0.240 Sum_probs=126.0
Q ss_pred CCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEe
Q 003911 92 TKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFS 170 (787)
Q Consensus 92 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 170 (787)
++|++|+|++|.|++.+| .|.++++|++|+|++|.++++++ |..+++|++|+|++|.|+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~------------------ 93 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ------------------ 93 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE------------------
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC------------------
Confidence 355555555555555544 45555555555555555555443 555555555555555544
Q ss_pred ccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEecccc
Q 003911 171 ANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSN 250 (787)
Q Consensus 171 l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N 250 (787)
+..+ .++|++|+|++|++++..+. .+++|+.|+|++|
T Consensus 94 -------~l~~-------~~~L~~L~L~~N~l~~~~~~-----------------------------~l~~L~~L~L~~N 130 (487)
T 3oja_A 94 -------ELLV-------GPSIETLHAANNNISRVSCS-----------------------------RGQGKKNIYLANN 130 (487)
T ss_dssp -------EEEE-------CTTCCEEECCSSCCCCEEEC-----------------------------CCSSCEEEECCSS
T ss_pred -------CCCC-------CCCcCEEECcCCcCCCCCcc-----------------------------ccCCCCEEECCCC
Confidence 3221 24455555555555543322 2345555666666
Q ss_pred ccccCCC-CCCCCCCCCEEecCCCcccccCCcccc-CCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCC
Q 003911 251 AFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLV-KLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGA 328 (787)
Q Consensus 251 ~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~ 328 (787)
.+++.+| .+..+++|++|+|++|+|++.+|..+. .+++|++|+|++|.|++.++..
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~---------------------- 188 (487)
T 3oja_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV---------------------- 188 (487)
T ss_dssp CCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC----------------------
T ss_pred CCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccc----------------------
Confidence 6655544 355566666666666666666666654 5666666666666666543210
Q ss_pred CCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccc
Q 003911 329 CDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSG 408 (787)
Q Consensus 329 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 408 (787)
..++|+.|+|++|++++..| .|..+++|+.|+|++|+|++
T Consensus 189 ---------------------------------------~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 189 ---------------------------------------VFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp ---------------------------------------CCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE
T ss_pred ---------------------------------------cCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc
Confidence 11356666666666665433 36777777777777777773
Q ss_pred cCCccCcCCCCCCeeeccCCccc-ccCC
Q 003911 409 MIPEGLSVLGALKELDVSNNQLY-GKIP 435 (787)
Q Consensus 409 ~ip~~l~~l~~L~~L~Ls~N~l~-g~iP 435 (787)
+|..+..+++|+.|++++|+++ +.+|
T Consensus 229 -lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 229 -IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp -ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred -cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 6667777777777777777776 4444
No 307
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.95 E-value=6.9e-28 Score=267.20 Aligned_cols=184 Identities=29% Similarity=0.334 Sum_probs=141.1
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 671 (787)
+.|.+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 456677899999999998776678999999998652 235678999999987 89999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCC-------------C
Q 003911 672 YMPQGTLSRHIFNWAEEGL--KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-------------M 736 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~ 736 (787)
|++ |+|.+++........ ....+..++.++.||+.||+|||+ .+|+||||||+|||++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCce
Confidence 995 699999865321111 112334567899999999999998 899999999999999754 4
Q ss_pred cEEEeecccceecCCCCCc---eeeeeccccCccccccccc-------CCcC-cceeecC
Q 003911 737 RAKVADFGLVRLAPEGKGS---IETRIAGTFGYLAPEYAVH-------TRWS-SCSYWAG 785 (787)
Q Consensus 737 ~~kl~DFG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~-~~DiWS~ 785 (787)
.+||+|||+++........ ......||+.|+|||++.+ ..++ ++||||.
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSl 225 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSM 225 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHH
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhH
Confidence 8999999999987654322 1224579999999999976 4566 8999983
No 308
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=8.6e-29 Score=262.90 Aligned_cols=249 Identities=19% Similarity=0.192 Sum_probs=213.7
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
.+++.|+|++|++++..|..|.++++|++|+|++|+|++.++ +..+++|++|+|++|+|+++++ .++|++|+++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~ 107 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCccccccC-----CCCcCEEECC
Confidence 379999999999998877899999999999999999998776 9999999999999999998763 4899999999
Q ss_pred CCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCC
Q 003911 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (787)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~ 227 (787)
+|+++. ++. ..+++|+.|++++|++++..+..++ .+++|++|+|++|++++..|..+.
T Consensus 108 ~n~l~~--~~~--~~~~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~---------------- 165 (317)
T 3o53_A 108 NNNISR--VSC--SRGQGKKNIYLANNKITMLRDLDEG--CRSRVQYLDLKLNEIDTVNFAELA---------------- 165 (317)
T ss_dssp SSCCSE--EEE--CCCSSCEEEECCSSCCCSGGGBCTG--GGSSEEEEECTTSCCCEEEGGGGG----------------
T ss_pred CCccCC--cCc--cccCCCCEEECCCCCCCCccchhhh--ccCCCCEEECCCCCCCcccHHHHh----------------
Confidence 999985 332 2368899999999999998888886 899999999999999987666542
Q ss_pred cCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCC
Q 003911 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFD 307 (787)
Q Consensus 228 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 307 (787)
..+++|++|+|++|.+++. +....+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++.++.+.
T Consensus 166 ---------~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 234 (317)
T 3o53_A 166 ---------ASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVLIEKALR 234 (317)
T ss_dssp ---------GGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCCEECTTCC
T ss_pred ---------hccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCcccchhhHhh
Confidence 3689999999999999987 44456899999999999999 466669999999999999999996544321
Q ss_pred CceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCccc-ccC
Q 003911 308 RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLT-GTI 386 (787)
Q Consensus 308 ~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-g~~ 386 (787)
..++|+.|++++|.+. +.+
T Consensus 235 ------------------------------------------------------------~l~~L~~L~l~~N~~~~~~~ 254 (317)
T 3o53_A 235 ------------------------------------------------------------FSQNLEHFDLRGNGFHCGTL 254 (317)
T ss_dssp ------------------------------------------------------------CCTTCCEEECTTCCCBHHHH
T ss_pred ------------------------------------------------------------cCCCCCEEEccCCCccCcCH
Confidence 2247899999999999 889
Q ss_pred chhhcCCCCCCEEecc-cccccccCCccCc
Q 003911 387 SPEFASFKSLQRLILA-DNNLSGMIPEGLS 415 (787)
Q Consensus 387 p~~~~~l~~L~~L~Ls-~N~l~g~ip~~l~ 415 (787)
|..+..+++|+.|+++ .+.++|..|....
T Consensus 255 ~~~~~~~~~L~~l~l~~~~~l~~~~~~~~~ 284 (317)
T 3o53_A 255 RDFFSKNQRVQTVAKQTVKKLTGQNEEECT 284 (317)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHSSSSCCCS
T ss_pred HHHHhccccceEEECCCchhccCCchhccC
Confidence 9999999999999999 5567777665443
No 309
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=262.29 Aligned_cols=188 Identities=23% Similarity=0.415 Sum_probs=152.7
Q ss_pred HHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeE
Q 003911 588 LRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 588 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 667 (787)
.....++|++.+.||+|+||.||+|+... .||+|+++.........+.+.+|++++++++||||+++++++.+.+..+
T Consensus 28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 33446789999999999999999998753 4999999765444445567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
+||||+++++|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++ ++.+||+|||+++
T Consensus 106 iv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFS 177 (319)
T ss_dssp EECBCCCSEEHHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred EEeecccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcc
Confidence 99999999999998843 23468899999999999999999998 8999999999999998 6799999999987
Q ss_pred ecCCCC----CceeeeeccccCccccccccc---------CCcC-cceeecC
Q 003911 748 LAPEGK----GSIETRIAGTFGYLAPEYAVH---------TRWS-SCSYWAG 785 (787)
Q Consensus 748 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~-~~DiWS~ 785 (787)
...... ........||+.|+|||++.+ ..++ ++||||.
T Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~sl 229 (319)
T 2y4i_B 178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229 (319)
T ss_dssp ----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHH
T ss_pred ccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHH
Confidence 653211 111223468999999999975 3456 8999983
No 310
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.94 E-value=9.7e-28 Score=261.25 Aligned_cols=180 Identities=25% Similarity=0.399 Sum_probs=153.0
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-----------CCccceEEeE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-----------HRHLVALLGH 659 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~ 659 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 358999999999999999999864 7899999998752 334567889999999886 8999999999
Q ss_pred EEeCC----eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEcCCCCCCEEEC-
Q 003911 660 CLDGN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLG- 733 (787)
Q Consensus 660 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~-~ivH~Dlkp~NIll~- 733 (787)
+...+ ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+ + +|+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEec
Confidence 98654 689999999 899999986532 2458999999999999999999998 6 999999999999994
Q ss_pred -----CCCcEEEeecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 734 -----DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 734 -----~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
..+.+||+|||+++...... ....||+.|+|||++.+..++ ++||||.
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 221 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWST 221 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHH
T ss_pred cCCCcCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHH
Confidence 44589999999998775432 235789999999999998888 8999983
No 311
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=263.81 Aligned_cols=180 Identities=24% Similarity=0.386 Sum_probs=141.7
Q ss_pred CCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCccceEEeEEEeCCeeEEEEE
Q 003911 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 671 (787)
.+|.+.+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+....|+|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 46888999999999997766566899999999865332 2356899999999 79999999999999999999999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC-----CCcEEEeecccc
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-----DMRAKVADFGLV 746 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DFG~a 746 (787)
|++ |+|.+++... .....+..+..++.||+.||+|||+ .+|+||||||+||+++. ...+||+|||+|
T Consensus 99 ~~~-g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 99 LCA-ATLQEYVEQK----DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp CCS-EEHHHHHHSS----SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred CCC-CCHHHHHHhc----CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 995 6999988542 2234455677899999999999998 89999999999999953 336889999999
Q ss_pred eecCCCCC--ceeeeeccccCccccccccc---CCcC-cceeecC
Q 003911 747 RLAPEGKG--SIETRIAGTFGYLAPEYAVH---TRWS-SCSYWAG 785 (787)
Q Consensus 747 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~-~~DiWS~ 785 (787)
+....... .......||+.|+|||++.+ ..++ ++||||.
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSl 215 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSA 215 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHH
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHH
Confidence 87754322 12234679999999999974 4555 8999983
No 312
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.94 E-value=4.5e-28 Score=275.98 Aligned_cols=186 Identities=28% Similarity=0.481 Sum_probs=156.6
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe------CC
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------GN 664 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~ 664 (787)
.++|++.+.||+|+||.||+|... +|+.||||++... ......+++.+|++++++++||||+++++++.. .+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 368999999999999999999764 6899999998763 345566789999999999999999999998765 66
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCc---EEEe
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVA 741 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 741 (787)
..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred eEEEEEEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEc
Confidence 7899999999999999986422 22358889999999999999999998 89999999999999997665 9999
Q ss_pred ecccceecCCCCCceeeeeccccCcccccccccCCcC-cceeecC
Q 003911 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVHTRWS-SCSYWAG 785 (787)
Q Consensus 742 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~DiWS~ 785 (787)
|||.++...... ......||+.|+|||++.+..++ ++||||.
T Consensus 167 DFG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSL 209 (676)
T 3qa8_A 167 DLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209 (676)
T ss_dssp SCCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHH
T ss_pred cccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHH
Confidence 999998775443 22346799999999999998888 9999983
No 313
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=252.79 Aligned_cols=185 Identities=24% Similarity=0.362 Sum_probs=136.1
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 670 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++..........+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467999999999999999999875 7899999999875433333445556666788889999999999999999999999
Q ss_pred EecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceecC
Q 003911 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (787)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 750 (787)
||+ ++.+..+... ....+++..+..++.|++.||+|||+ +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~-~~~~~~l~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR----MQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHH--HHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHh--hCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 5555444422 12468999999999999999999997 1399999999999999999999999999997664
Q ss_pred CCCCceeeeeccccCcccccccc-----cCCcC-cceeecC
Q 003911 751 EGKGSIETRIAGTFGYLAPEYAV-----HTRWS-SCSYWAG 785 (787)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~-~~DiWS~ 785 (787)
... ......||+.|+|||++. +..++ ++||||.
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 215 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSL 215 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHH
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhH
Confidence 432 223356899999999995 44556 8999983
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.5e-25 Score=254.94 Aligned_cols=255 Identities=23% Similarity=0.274 Sum_probs=212.5
Q ss_pred CCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEec
Q 003911 92 TKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSA 171 (787)
Q Consensus 92 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l 171 (787)
.+++.|++++|.|+.+++.+. ++|++|+|++|+|+.++. .+++|++|+|++|+|+ .+|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~--~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLT--SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCS--CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcCccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCC--cCCC---CCCCCCEEEC
Confidence 468999999999997666665 899999999999999887 5799999999999999 5676 7899999999
Q ss_pred cCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccc
Q 003911 172 NSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA 251 (787)
Q Consensus 172 ~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 251 (787)
++|+|++..+ .+++|++|+|++|+|++ +|. .+++|++|+|++|+
T Consensus 109 s~N~l~~l~~------~l~~L~~L~L~~N~l~~-lp~-----------------------------~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 109 FSNPLTHLPA------LPSGLCKLWIFGNQLTS-LPV-----------------------------LPPGLQELSVSDNQ 152 (622)
T ss_dssp CSCCCCCCCC------CCTTCCEEECCSSCCSC-CCC-----------------------------CCTTCCEEECCSSC
T ss_pred cCCcCCCCCC------CCCCcCEEECCCCCCCc-CCC-----------------------------CCCCCCEEECcCCc
Confidence 9999987543 36789999999999985 443 24789999999999
Q ss_pred cccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCc
Q 003911 252 FSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDP 331 (787)
Q Consensus 252 l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~ 331 (787)
+++.++ .+++|+.|++++|+|+ .+| ..+++|+.|+|++|+|++.++.+ .+|..+++++|.+..++..
T Consensus 153 l~~l~~---~~~~L~~L~L~~N~l~-~l~---~~~~~L~~L~Ls~N~l~~l~~~~---~~L~~L~L~~N~l~~l~~~--- 219 (622)
T 3g06_A 153 LASLPA---LPSELCKLWAYNNQLT-SLP---MLPSGLQELSVSDNQLASLPTLP---SELYKLWAYNNRLTSLPAL--- 219 (622)
T ss_dssp CSCCCC---CCTTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSSCCCC---
T ss_pred CCCcCC---ccCCCCEEECCCCCCC-CCc---ccCCCCcEEECCCCCCCCCCCcc---chhhEEECcCCcccccCCC---
Confidence 997654 3478999999999999 577 55789999999999999865543 4566777888877655421
Q ss_pred hhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCC
Q 003911 332 RLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIP 411 (787)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 411 (787)
.++|+.|+|++|++++ +| ..+++|+.|+|++|+|+ .+|
T Consensus 220 -------------------------------------~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp 257 (622)
T 3g06_A 220 -------------------------------------PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLP 257 (622)
T ss_dssp -------------------------------------CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCC
T ss_pred -------------------------------------CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCC
Confidence 1489999999999997 66 56789999999999999 677
Q ss_pred ccCcCCCCCCeeeccCCcccccCCC----CCCCceeecCCCCCCC
Q 003911 412 EGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIG 452 (787)
Q Consensus 412 ~~l~~l~~L~~L~Ls~N~l~g~iP~----~~~~~~~~~~gn~~~~ 452 (787)
. .+++|+.|+|++|+|+ .||. +..+..+.+.+|+..+
T Consensus 258 ~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 258 M---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp C---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCH
T ss_pred c---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCC
Confidence 7 6789999999999999 6664 5667889999998754
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1e-27 Score=269.44 Aligned_cols=195 Identities=20% Similarity=0.199 Sum_probs=158.4
Q ss_pred CEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccC
Q 003911 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (787)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 148 (787)
+++.|+|++|++++..|..|+.+++|++|+|++|.|++.+| |..+++|++|+|++|.|+++++. ++|++|+|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~~-----~~L~~L~L~~ 108 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVG-----PSIETLHAAN 108 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEEC-----TTCCEEECCS
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCCC-----CCcCEEECcC
Confidence 79999999999998888899999999999999999998777 99999999999999999987743 8999999999
Q ss_pred CCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCc
Q 003911 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAK 228 (787)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~ 228 (787)
|.+++ ++. ..+++|+.|++++|.+++.+|..++ .+++|++|+|++|++++.+|..+.
T Consensus 109 N~l~~--~~~--~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~l~----------------- 165 (487)
T 3oja_A 109 NNISR--VSC--SRGQGKKNIYLANNKITMLRDLDEG--CRSRVQYLDLKLNEIDTVNFAELA----------------- 165 (487)
T ss_dssp SCCCC--EEE--CCCSSCEEEECCSSCCCSGGGBCGG--GGSSEEEEECTTSCCCEEEGGGGG-----------------
T ss_pred CcCCC--CCc--cccCCCCEEECCCCCCCCCCchhhc--CCCCCCEEECCCCCCCCcChHHHh-----------------
Confidence 99985 222 2457788888888888888787775 788888888888888877666542
Q ss_pred CCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccccc
Q 003911 229 LGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 229 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
..+++|+.|+|++|.|++.+ .+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+|++.
T Consensus 166 --------~~l~~L~~L~Ls~N~l~~~~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~l 229 (487)
T 3oja_A 166 --------ASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLI 229 (487)
T ss_dssp --------GGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEE
T ss_pred --------hhCCcccEEecCCCcccccc-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCccc
Confidence 25778888888888888763 34457788888888888885 444577777788888777777653
No 316
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=5.5e-26 Score=236.32 Aligned_cols=208 Identities=18% Similarity=0.233 Sum_probs=165.8
Q ss_pred CEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
.++.|++++|++++..+..|.++++|++|+|++|+|++.++ .|.++++|++|+|++|+++++++..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 57888888888887666688888888888888888887766 68888888888888888888888888888888888888
Q ss_pred CCCCCCCCCChhhhcCCCCCEEeccCceeccc-CCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCC
Q 003911 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQ-IPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGN 226 (787)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~ 226 (787)
+|++.. ..+..+..+++|++|++++|.+++. +|..+. .+++|++|+|++|++++..+..+.
T Consensus 109 ~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~--------------- 170 (276)
T 2z62_A 109 ETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLR--------------- 170 (276)
T ss_dssp TSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECCSSCCCEECGGGGH---------------
T ss_pred CCCccc-cCchhcccCCCCCEEECcCCccceecCchhhc--cCCCCCEEECCCCCCCcCCHHHhh---------------
Confidence 888875 3344688888888888888888764 477775 788888888888888866655543
Q ss_pred CcCCCCccccccCccCc----eEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccccc
Q 003911 227 AKLGGGIDVIQNMTSLK----EIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 227 ~~~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
.+++|+ .|++++|.+++.++......+|+.|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 171 -----------~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 171 -----------VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp -----------HHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred -----------hhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 444444 89999999998888766666899999999999966666778899999999999999876
Q ss_pred CCC
Q 003911 303 VPE 305 (787)
Q Consensus 303 ~p~ 305 (787)
.|.
T Consensus 240 c~~ 242 (276)
T 2z62_A 240 CPR 242 (276)
T ss_dssp TTT
T ss_pred CCc
Confidence 553
No 317
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.6e-25 Score=232.93 Aligned_cols=76 Identities=24% Similarity=0.377 Sum_probs=53.4
Q ss_pred eCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCC
Q 003911 75 IGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSS 153 (787)
Q Consensus 75 l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 153 (787)
..+.++. .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+++++++..|.++++|++|+|++|+++.
T Consensus 14 c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (276)
T 2z62_A 14 CMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (276)
T ss_dssp CTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred ecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCc
Confidence 3344454 5666554 567888888888877666 67777778888887777777777777777777777777776653
No 318
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.93 E-value=9.2e-29 Score=277.46 Aligned_cols=330 Identities=19% Similarity=0.184 Sum_probs=191.5
Q ss_pred CEEEEEeCCCCccc----cCCCCCCCCCCCcEEEeecCCCCCCCC-C-CCCCC----CCcEEEcccccCCc----CCCcc
Q 003911 69 RITRIQIGHQNLQG----TLPSNLQNLTKLERLELQWNSISGPLP-S-LNGLA----SLEVVMLSNNQFTS----VPSDF 134 (787)
Q Consensus 69 ~v~~L~l~~~~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~-~-~~~l~----~L~~L~L~~N~l~~----~~~~~ 134 (787)
+++.|++++|+++. .++..+..+++|++|+|++|.|++..+ . +..++ +|++|+|++|+++. ..+..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 56666666666653 344555666666666666666654222 1 12233 56666666666663 23455
Q ss_pred ccCCCCCcEEEccCCCCCCCCCChhhh-----cCCCCCEEeccCceecccC----CCCCCCCCCCCCcEEeccccccccC
Q 003911 135 FTGLSSLQSIEIDNNPFSSWEIPQSLR-----NASGLQNFSANSANITGQI----PSFFGPDEFPGLTILHLAFNQLIGG 205 (787)
Q Consensus 135 ~~~l~~L~~L~L~~N~l~~~~~p~~~~-----~l~~L~~L~l~~n~l~~~~----p~~~~~~~l~~L~~L~L~~N~l~~~ 205 (787)
|..+++|++|+|++|.+.. ..+..+. ..++|++|++++|++++.. +..+. .+++|++|+|++|.++..
T Consensus 109 l~~~~~L~~L~Ls~n~i~~-~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~--~~~~L~~L~L~~n~i~~~ 185 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGD-AGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLR--AKPDFKELTVSNNDINEA 185 (461)
T ss_dssp TTSCTTCCEEECCSSBCHH-HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHH--HCTTCCEEECCSSBCHHH
T ss_pred HccCCceeEEECCCCcCch-HHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHh--hCCCCCEEECcCCCcchH
Confidence 6666666666666666553 2222222 1345666666666666532 33332 456677777777766544
Q ss_pred CCcCccc------ccccceeeccCCCCCcC-CCCccccccCccCceEeccccccccCC-----CC-CCCCCCCCEEecCC
Q 003911 206 LPASFSG------SQIQSLWVNGQNGNAKL-GGGIDVIQNMTSLKEIWLHSNAFSGPL-----PD-FSGVKQLESLSLRD 272 (787)
Q Consensus 206 ~p~~~~~------~~l~~L~~~~~~~~~~~-~~~~~~~~~l~~L~~L~L~~N~l~~~~-----~~-~~~l~~L~~L~L~~ 272 (787)
.+..+.. .+++.|++.++...... ...+..+..+++|++|+|++|.++... +. +..+++|++|+|++
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~ 265 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcC
Confidence 3333321 25556655544221100 002344556777777777777776531 22 33467777777777
Q ss_pred Cccccc----CCccccCCCCCCEEEccCCcccccCCC-C----C-CceeeeccccCCCccCCCCCCCCchhhHHHHHHHH
Q 003911 273 NFFTGP----VPDSLVKLESLKIVNMTNNLLQGPVPE-F----D-RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKL 342 (787)
Q Consensus 273 N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~----~-~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~ 342 (787)
|++++. ++..+..+++|++|+|++|.+++..+. + . ...+|+.+++++|.+.... ...+
T Consensus 266 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~------~~~l------ 333 (461)
T 1z7x_W 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC------CSHF------ 333 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG------HHHH------
T ss_pred CCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH------HHHH------
Confidence 777743 566677777777777777777643221 1 1 1135566666666543210 0000
Q ss_pred hCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcC-----CCCCCEEecccccccc----cCCcc
Q 003911 343 MGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFAS-----FKSLQRLILADNNLSG----MIPEG 413 (787)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~g----~ip~~ 413 (787)
...+...++|+.|+|++|++++..+..+.. .++|+.|+|++|++++ .+|..
T Consensus 334 --------------------~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 393 (461)
T 1z7x_W 334 --------------------SSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAAT 393 (461)
T ss_dssp --------------------HHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred --------------------HHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHH
Confidence 011122357888888888888766665553 6788888888888876 67777
Q ss_pred CcCCCCCCeeeccCCccccc
Q 003911 414 LSVLGALKELDVSNNQLYGK 433 (787)
Q Consensus 414 l~~l~~L~~L~Ls~N~l~g~ 433 (787)
+..+++|++|||++|++++.
T Consensus 394 l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 394 LLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHCCCCCEEECCSSSCCHH
T ss_pred HHhCCCccEEECCCCCCCHH
Confidence 88888888888888888753
No 319
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=2.3e-25 Score=231.00 Aligned_cols=179 Identities=20% Similarity=0.279 Sum_probs=83.5
Q ss_pred CCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCE
Q 003911 89 QNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQN 168 (787)
Q Consensus 89 ~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~ 168 (787)
..+++|+.|++++|.++. ++.+..+++|++|+|++|++++++ .+.++++|++|+|++|++++ ..+..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-~~~l~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKS-VQGIQYLPNVRYLALGGNKLHDIS--ALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCCC-CTTGGGCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCccc-ccccccCCCCcEEECCCCCCCCch--hhcCCCCCCEEECCCCccCc-cChhHhcCCcCCCE
Confidence 344455555555555543 233445555555555555555432 34455555555555555543 22333444444444
Q ss_pred EeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEecc
Q 003911 169 FSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLH 248 (787)
Q Consensus 169 L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~ 248 (787)
|++++|++++..+..|+ .+++|++|+|++|++++..+..|. ++++|+.|+|+
T Consensus 114 L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~--------------------------~l~~L~~L~l~ 165 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFD--KLTNLTYLNLAHNQLQSLPKGVFD--------------------------KLTNLTELDLS 165 (272)
T ss_dssp EECTTSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTT--------------------------TCTTCCEEECC
T ss_pred EECCCCcCCccCHHHhc--cCCCCCEEECCCCccCccCHHHhc--------------------------cCccCCEEECC
Confidence 44444444444444443 444555555555544433332221 34444445555
Q ss_pred ccccccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcc
Q 003911 249 SNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLL 299 (787)
Q Consensus 249 ~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 299 (787)
+|++++.++. +..+++|++|+|++|+|++..|..+..+++|++|+|++|++
T Consensus 166 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 166 YNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 4444444433 34444555555555555444444444444444444444443
No 320
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.93 E-value=1.5e-25 Score=234.01 Aligned_cols=143 Identities=13% Similarity=0.040 Sum_probs=126.6
Q ss_pred cCCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccccc-chhHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
.++|++.+.||+|+||.||+|+.. +++.||||++...... ....+++.+|++++++++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999876 5899999999865433 34557899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
|||+++++|.+++.. .....++.+++.|++.||+|||+ .+|+||||||+||++++++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~-------~~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT-------SPSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp EECCCEEEHHHHHTT-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred EEecCCCCHHHHHhc-------CCChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc
Confidence 999999999999832 13556788999999999999998 899999999999999999999998554
No 321
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=9.5e-27 Score=263.71 Aligned_cols=171 Identities=18% Similarity=0.218 Sum_probs=133.2
Q ss_pred cccceeccccceEEEEEEEeCCcEEEEEEeecccccch------hHHHHHHHHHHHHhcCCCccceEEeEEEeCCeeEEE
Q 003911 596 SEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGK------GLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 596 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 669 (787)
...+.||+|+||.||+|+. .++.+++|+......... ..+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999954 578899998755333211 245689999999999999999776677778888999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
|||+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||+++ .+||+|||+|+..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999998843 45799999999999998 89999999999999998 9999999999987
Q ss_pred CCCCCce------eeeeccccCccccccccc--CCcC-cceeecC
Q 003911 750 PEGKGSI------ETRIAGTFGYLAPEYAVH--TRWS-SCSYWAG 785 (787)
Q Consensus 750 ~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~-~~DiWS~ 785 (787)
....... .....||+.|||||++.+ ..|+ .+|+||.
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~ 524 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEI 524 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHH
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHH
Confidence 5532211 134679999999999987 5566 7899973
No 322
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=9.2e-25 Score=228.24 Aligned_cols=201 Identities=18% Similarity=0.218 Sum_probs=174.4
Q ss_pred EcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCc
Q 003911 64 CIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQ 142 (787)
Q Consensus 64 C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 142 (787)
|..-.+++.+++++++++ .+|..+. ++|+.|+|++|+|++..+ .|.++++|++|+|++|+|+++++. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 445567889999999998 6777775 689999999999998776 689999999999999999988764 7899999
Q ss_pred EEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeecc
Q 003911 143 SIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNG 222 (787)
Q Consensus 143 ~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~ 222 (787)
+|+|++|+++ .+|..+..+++|++|++++|+|++..|..|. .+++|++|+|++|+|++..+..|.
T Consensus 81 ~L~Ls~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~----------- 145 (290)
T 1p9a_G 81 TLDLSHNQLQ--SLPLLGQTLPALTVLDVSFNRLTSLPLGALR--GLGELQELYLKGNELKTLPPGLLT----------- 145 (290)
T ss_dssp EEECCSSCCS--SCCCCTTTCTTCCEEECCSSCCCCCCSSTTT--TCTTCCEEECTTSCCCCCCTTTTT-----------
T ss_pred EEECCCCcCC--cCchhhccCCCCCEEECCCCcCcccCHHHHc--CCCCCCEEECCCCCCCccChhhcc-----------
Confidence 9999999998 6888889999999999999999988888886 899999999999999866665543
Q ss_pred CCCCCcCCCCccccccCccCceEeccccccccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccc
Q 003911 223 QNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQ 300 (787)
Q Consensus 223 ~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 300 (787)
.+++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 146 ---------------~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 146 ---------------PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp ---------------TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ---------------cccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 788999999999999987775 677999999999999999 78888888899999999999876
No 323
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.92 E-value=3.9e-26 Score=251.39 Aligned_cols=184 Identities=18% Similarity=0.231 Sum_probs=137.9
Q ss_pred CCCcccceeccccceEEEEEEEe-CCcEEEEEEeeccc-ccchhHHHHHHHHHHHHhcCC-Cccce--------------
Q 003911 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGV-ISGKGLTEFKSEIAVLTKVRH-RHLVA-------------- 655 (787)
Q Consensus 593 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h-~niv~-------------- 655 (787)
..|...+.||+|+||.||+|++. +|+.||||++.... ......+.+++|+.+++.++| ++...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45778899999999999999864 79999999987432 223446789999999999987 22111
Q ss_pred -------EEeEEEe-----CCeeEEEEEecCCCCHHHHHHhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 003911 656 -------LLGHCLD-----GNEKLLVFEYMPQGTLSRHIFNWAE--EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFI 721 (787)
Q Consensus 656 -------~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 721 (787)
+..++.. ....+++|+++ +++|.+++..... .....+++..++.++.|++.||+|||+ ++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 1111111 12356777765 7899998853321 223457788999999999999999998 8999
Q ss_pred EcCCCCCCEEECCCCcEEEeecccceecCCCCCceeeeeccccCccccccc----------ccCCcC-cceeecC
Q 003911 722 HRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA----------VHTRWS-SCSYWAG 785 (787)
Q Consensus 722 H~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~-~~DiWS~ 785 (787)
||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++ ++||||.
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSl 303 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHH
Confidence 9999999999999999999999999875432 334578 999999999 555677 8999983
No 324
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=9.4e-25 Score=223.51 Aligned_cols=192 Identities=20% Similarity=0.308 Sum_probs=134.2
Q ss_pred CCCCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCc
Q 003911 55 DPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSD 133 (787)
Q Consensus 55 ~~C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~ 133 (787)
+||.|.|++|.. ..+.+++++++++ .+|..+. ++|+.|+|++|+|++..+ .|.++++|++|+|++|+|+++++.
T Consensus 3 ~Cp~~~gC~C~~--~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 3 TCETVTGCTCNE--GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp -CHHHHSSEEEG--GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred cCCCCCceEcCC--CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 578999999964 3457889999998 7777776 688999999999988777 688888899999999988888888
Q ss_pred cccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccc
Q 003911 134 FFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGS 213 (787)
Q Consensus 134 ~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 213 (787)
.|.++++|++|+|++|+++. ..+..|..+++|++|++++|+|++..+..|.
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------------- 128 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFD---------------------------- 128 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT----------------------------
T ss_pred HhccCCcCCEEECCCCcccc-cChhHhcccCCCCEEEcCCCcCCCcChhHhc----------------------------
Confidence 88888888888888888774 2233444444444444444444443333332
Q ss_pred cccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCcccccCCccccCCCCCCEE
Q 003911 214 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 292 (787)
Q Consensus 214 ~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 292 (787)
++++|++|+|++|+|++.++ .|..+++|++|+|++|+|++..+..|..+++|++|
T Consensus 129 ------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 184 (251)
T 3m19_A 129 ------------------------RLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184 (251)
T ss_dssp ------------------------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred ------------------------cCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 45556666666666665555 35666677777777777775555667777777777
Q ss_pred EccCCcccccCC
Q 003911 293 NMTNNLLQGPVP 304 (787)
Q Consensus 293 ~Ls~N~l~~~~p 304 (787)
+|++|++++...
T Consensus 185 ~l~~N~~~c~~~ 196 (251)
T 3m19_A 185 TLFGNQFDCSRC 196 (251)
T ss_dssp ECCSCCBCTTST
T ss_pred EeeCCceeCCcc
Confidence 777777765533
No 325
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.92 E-value=5.9e-29 Score=279.06 Aligned_cols=349 Identities=15% Similarity=0.128 Sum_probs=240.6
Q ss_pred CCEEEEEeCCCCccccCCCC-CCCCCCCcEEEeecCCCCCC----CC-CCCCCCCCcEEEcccccCCcCCCc-cccCCC-
Q 003911 68 KRITRIQIGHQNLQGTLPSN-LQNLTKLERLELQWNSISGP----LP-SLNGLASLEVVMLSNNQFTSVPSD-FFTGLS- 139 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~----~~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~- 139 (787)
.+++.|+|++++++...... +..+++|++|+|++|+++.. ++ .+..+++|++|+|++|+++..... .+..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 36899999999998654333 78899999999999999853 23 578899999999999999875433 334566
Q ss_pred ---CCcEEEccCCCCCCC---CCChhhhcCCCCCEEeccCceecccCCCCCC---CCCCCCCcEEeccccccccCCCc--
Q 003911 140 ---SLQSIEIDNNPFSSW---EIPQSLRNASGLQNFSANSANITGQIPSFFG---PDEFPGLTILHLAFNQLIGGLPA-- 208 (787)
Q Consensus 140 ---~L~~L~L~~N~l~~~---~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~---~~~l~~L~~L~L~~N~l~~~~p~-- 208 (787)
+|++|+|++|+++.. .++..+..+++|++|++++|.+++..+..+. ....++|++|+|++|++++..+.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 799999999998841 3578899999999999999999865444322 01356899999999999875433
Q ss_pred --Cccc-ccccceeeccCCCCCcCCCCccccc-----cCccCceEeccccccccC-----CCCCCCCCCCCEEecCCCcc
Q 003911 209 --SFSG-SQIQSLWVNGQNGNAKLGGGIDVIQ-----NMTSLKEIWLHSNAFSGP-----LPDFSGVKQLESLSLRDNFF 275 (787)
Q Consensus 209 --~~~~-~~l~~L~~~~~~~~~~~~~~~~~~~-----~l~~L~~L~L~~N~l~~~-----~~~~~~l~~L~~L~L~~N~l 275 (787)
.+.. .+|+.|++.++. .....+..+. ..++|++|+|++|.++.. +..+..+++|++|+|++|++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~---i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 239 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNND---INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKL 239 (461)
T ss_dssp HHHHHHCTTCCEEECCSSB---CHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred HHHHhhCCCCCEEECcCCC---cchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcC
Confidence 2222 456666665433 1111122222 245788888888877763 22355677788888888877
Q ss_pred cccC-----CccccCCCCCCEEEccCCccccc-----CCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCC
Q 003911 276 TGPV-----PDSLVKLESLKIVNMTNNLLQGP-----VPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGY 345 (787)
Q Consensus 276 ~~~~-----p~~l~~l~~L~~L~Ls~N~l~~~-----~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~ 345 (787)
++.. +..+..+++|++|+|++|++++. +..+..+.+|+.+++++|.+... ....+....
T Consensus 240 ~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~---------~~~~l~~~l-- 308 (461)
T 1z7x_W 240 GDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE---------GARLLCETL-- 308 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH---------HHHHHHHHH--
T ss_pred ChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH---------HHHHHHHHh--
Confidence 7432 22223577888888888877762 22233455666777777654211 000111100
Q ss_pred ChhhhcccCCCCCCCCccccccCCCceEEEEccCCccccc----CchhhcCCCCCCEEecccccccccCCccCcC-----
Q 003911 346 PQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT----ISPEFASFKSLQRLILADNNLSGMIPEGLSV----- 416 (787)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~----- 416 (787)
....++|+.|+|++|++++. +|..+..+++|+.|+|++|++++..+..+..
T Consensus 309 --------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 368 (461)
T 1z7x_W 309 --------------------LEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQP 368 (461)
T ss_dssp --------------------TSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred --------------------ccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCC
Confidence 01124899999999999876 6777888899999999999998766655543
Q ss_pred CCCCCeeeccCCcccc----cCCC----CCCCceeecCCCCC
Q 003911 417 LGALKELDVSNNQLYG----KIPS----FKSNAIVNTDGNPD 450 (787)
Q Consensus 417 l~~L~~L~Ls~N~l~g----~iP~----~~~~~~~~~~gn~~ 450 (787)
.++|++|+|++|++++ .+|. .+.+..+.+.+|+.
T Consensus 369 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 369 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred CCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 6799999999999986 5553 56677888888754
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=6.7e-24 Score=219.71 Aligned_cols=178 Identities=21% Similarity=0.308 Sum_probs=135.4
Q ss_pred CCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCC-hhhhcCCCCCEEec
Q 003911 93 KLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIP-QSLRNASGLQNFSA 171 (787)
Q Consensus 93 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~L~l 171 (787)
+++.+++++|+++.++..+. ++|++|+|++|+++++++..|.++++|++|+|++|+++. +| ..|..+++|++|++
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT--LPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC--CCTTTTSSCTTCCEEEC
T ss_pred CCCEEEccCCCCCccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe--eChhhhcCCCCCCEEEC
Confidence 57889999999997665554 689999999999999998889999999999999999884 44 44577888888888
Q ss_pred cCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccc
Q 003911 172 NSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA 251 (787)
Q Consensus 172 ~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 251 (787)
++|.+++..+..|. .+++|++|+|++|++++..|..|. ++++|++|+|++|+
T Consensus 93 ~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~--------------------------~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 93 TDNKLQALPIGVFD--QLVNLAELRLDRNQLKSLPPRVFD--------------------------SLTKLTYLSLGYNE 144 (270)
T ss_dssp CSSCCCCCCTTTTT--TCSSCCEEECCSSCCCCCCTTTTT--------------------------TCTTCCEEECCSSC
T ss_pred CCCcCCcCCHhHcc--cccCCCEEECCCCccCeeCHHHhC--------------------------cCcCCCEEECCCCc
Confidence 88888877766665 777888888888887765555443 67777777777777
Q ss_pred cccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccccc
Q 003911 252 FSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 252 l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
+++.++. |..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 7766654 66677777777777777755555667777777777777766643
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.8e-24 Score=224.11 Aligned_cols=201 Identities=21% Similarity=0.317 Sum_probs=180.4
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
.+++.|++++++++. + +.+..+++|++|+|++|++++. +.+.++++|++|+|++|+++++++..|.++++|++|+|+
T Consensus 41 ~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 579999999999883 3 3589999999999999999984 589999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCC
Q 003911 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (787)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~ 227 (787)
+|+++. ..+..+..+++|++|++++|++++..+..|. .+++|++|+|++|++++..+..|.
T Consensus 118 ~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~---------------- 178 (272)
T 3rfs_A 118 ENQLQS-LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD--KLTNLTELDLSYNQLQSLPEGVFD---------------- 178 (272)
T ss_dssp TSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTT----------------
T ss_pred CCcCCc-cCHHHhccCCCCCEEECCCCccCccCHHHhc--cCccCCEEECCCCCcCccCHHHhc----------------
Confidence 999996 4566689999999999999999998888886 899999999999999977665543
Q ss_pred cCCCCccccccCccCceEeccccccccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCC
Q 003911 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (787)
Q Consensus 228 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 306 (787)
++++|++|+|++|++++.++. +..+++|+.|+|++|.+.+. +++|+.|+++.|+++|.+|..
T Consensus 179 ----------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 179 ----------KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp ----------TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred ----------CCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 789999999999999998886 78899999999999999864 557999999999999988864
Q ss_pred C
Q 003911 307 D 307 (787)
Q Consensus 307 ~ 307 (787)
.
T Consensus 242 ~ 242 (272)
T 3rfs_A 242 A 242 (272)
T ss_dssp T
T ss_pred c
Confidence 3
No 328
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.92 E-value=1.4e-24 Score=228.59 Aligned_cols=146 Identities=23% Similarity=0.374 Sum_probs=126.6
Q ss_pred cCCCccc-ceeccccceEEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHH-HhcCCCccceEEeEEEe----CC
Q 003911 592 TNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVL-TKVRHRHLVALLGHCLD----GN 664 (787)
Q Consensus 592 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~ 664 (787)
.++|.+. +.||+|+||.||+|... +++.||+|+++. ...+.+|++++ +..+||||+++++++.. ..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 4567776 78999999999999874 789999999864 24677888888 55589999999999987 66
Q ss_pred eeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEECC---CCcEEEe
Q 003911 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 741 (787)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 741 (787)
..++||||+++|+|.+++.. .....+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred eEEEEEeecCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEe
Confidence 78999999999999999865 222468999999999999999999998 89999999999999997 7889999
Q ss_pred ecccceecC
Q 003911 742 DFGLVRLAP 750 (787)
Q Consensus 742 DFG~a~~~~ 750 (787)
|||++....
T Consensus 163 Dfg~a~~~~ 171 (299)
T 3m2w_A 163 DFGFAKETT 171 (299)
T ss_dssp CCTTCEECT
T ss_pred ccccccccc
Confidence 999997654
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=5.1e-24 Score=222.55 Aligned_cols=204 Identities=22% Similarity=0.253 Sum_probs=118.9
Q ss_pred CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCC
Q 003911 110 SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEF 189 (787)
Q Consensus 110 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l 189 (787)
.+.++++|+++++++|+++.+|+..+ ++|++|+|++|+++. ..|..|..+++|++|++++|.|++..+. + .+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~--~l 76 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAELTKLQVD--G--TL 76 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSE-EEGGGGTTCTTCCEEECTTSCCCEEECC--S--CC
T ss_pred cccccCCccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCc-cCHHHhhcCCCCCEEECCCCccCcccCC--C--CC
Confidence 35667777777777777777776533 566777777777664 3345566666666666666665544332 1 45
Q ss_pred CCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCC-CCCCCCCCEE
Q 003911 190 PGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESL 268 (787)
Q Consensus 190 ~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L 268 (787)
++|++|+|++|+++ .+|..+ .++++|++|+|++|+|++.++. |.++++|++|
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~--------------------------~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L 129 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLG--------------------------QTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCT--------------------------TTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEE
T ss_pred CcCCEEECCCCcCC-cCchhh--------------------------ccCCCCCEEECCCCcCcccCHHHHcCCCCCCEE
Confidence 55555555555554 233222 1344444444444444444432 4444444444
Q ss_pred ecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChh
Q 003911 269 SLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQR 348 (787)
Q Consensus 269 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 348 (787)
+|++|+|++..+..|..+++|+.
T Consensus 130 ~L~~N~l~~~~~~~~~~l~~L~~--------------------------------------------------------- 152 (290)
T 1p9a_G 130 YLKGNELKTLPPGLLTPTPKLEK--------------------------------------------------------- 152 (290)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCE---------------------------------------------------------
T ss_pred ECCCCCCCccChhhcccccCCCE---------------------------------------------------------
Confidence 44444444333333444444444
Q ss_pred hhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCC
Q 003911 349 FAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 428 (787)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N 428 (787)
|+|++|++++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|
T Consensus 153 --------------------------L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~N 205 (290)
T 1p9a_G 153 --------------------------LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205 (290)
T ss_dssp --------------------------EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSC
T ss_pred --------------------------EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCC
Confidence 444444444333445677888888888888888 78888888888888888887
Q ss_pred cccc
Q 003911 429 QLYG 432 (787)
Q Consensus 429 ~l~g 432 (787)
++..
T Consensus 206 p~~C 209 (290)
T 1p9a_G 206 PWLC 209 (290)
T ss_dssp CBCC
T ss_pred CccC
Confidence 7754
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=3.6e-24 Score=217.44 Aligned_cols=189 Identities=16% Similarity=0.203 Sum_probs=122.5
Q ss_pred cCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEccccc-CCcCCCccccCCCCCcEEEccC-CCCCCCCCChh
Q 003911 83 TLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ-FTSVPSDFFTGLSSLQSIEIDN-NPFSSWEIPQS 159 (787)
Q Consensus 83 ~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~p~~ 159 (787)
.+|. +. ++|++|+|++|+|++.++ .|.++++|++|+|++|+ ++.+++..|.++++|++|+|++ |+++. ..+..
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~-i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY-IDPDA 100 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE-ECTTS
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE-cCHHH
Confidence 4555 33 367777777777776665 56677777777777775 7777776677777777777776 77763 22355
Q ss_pred hhcCCCCCEEeccCceecccCCCCCCCCCCCCCc---EEecccc-ccccCCCcCcccccccceeeccCCCCCcCCCCccc
Q 003911 160 LRNASGLQNFSANSANITGQIPSFFGPDEFPGLT---ILHLAFN-QLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDV 235 (787)
Q Consensus 160 ~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~ 235 (787)
|.++++|++|++++|.+++ +|. |. .+++|+ +|++++| ++++..+..|.
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-~~--~l~~L~~L~~L~l~~N~~l~~i~~~~~~------------------------ 152 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-LT--KVYSTDIFFILEITDNPYMTSIPVNAFQ------------------------ 152 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-CT--TCCBCCSEEEEEEESCTTCCEECTTTTT------------------------
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-cc--cccccccccEEECCCCcchhhcCccccc------------------------
Confidence 6677777777777777766 444 43 566666 7777777 66654444443
Q ss_pred cccCccCc-eEeccccccccCCCCCCCCCCCCEEecCCCc-ccccCCccccCC-CCCCEEEccCCcccccCCC
Q 003911 236 IQNMTSLK-EIWLHSNAFSGPLPDFSGVKQLESLSLRDNF-FTGPVPDSLVKL-ESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 236 ~~~l~~L~-~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~ 305 (787)
++++|+ +|+|++|+++..++.....++|+.|+|++|+ +++..+..|..+ ++|++|+|++|++++.++.
T Consensus 153 --~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~ 223 (239)
T 2xwt_C 153 --GLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK 223 (239)
T ss_dssp --TTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT
T ss_pred --chhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh
Confidence 566777 7777777777555443233677777777774 765555666677 7777777777777765544
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=5.9e-25 Score=232.56 Aligned_cols=227 Identities=18% Similarity=0.208 Sum_probs=124.4
Q ss_pred CCcEEEeecCCCCCC-C---CCCCCCCCCcEEEcccccCCcCCCccc--cCCCCCcEEEccCCCCCCCCCC----hhhhc
Q 003911 93 KLERLELQWNSISGP-L---PSLNGLASLEVVMLSNNQFTSVPSDFF--TGLSSLQSIEIDNNPFSSWEIP----QSLRN 162 (787)
Q Consensus 93 ~L~~L~L~~N~l~~~-~---~~~~~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~p----~~~~~ 162 (787)
.++.|.+.++.++.. . ..+..+++|++|+|++|++++..+..+ ..+++|++|+|++|++.+ ..+ ..+..
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-~~~~~~~~~~~~ 143 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWAT-GRSWLAELQQWL 143 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSS-TTSSHHHHHTTB
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccc-hhhhhHHHHhhh
Confidence 456667766666431 1 122334557777777777776666555 667777777777776664 222 22334
Q ss_pred CCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccC
Q 003911 163 ASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSL 242 (787)
Q Consensus 163 l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L 242 (787)
+++|++|++++|.+++.+|..|+ .+++|++|+|++|++.+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~------------------------------------ 185 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVR--AFPALTSLDLSDNPGLGER------------------------------------ 185 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCC--CCTTCCEEECCSCTTCHHH------------------------------------
T ss_pred ccCCCEEEeeCCCcchhhHHHhc--cCCCCCEEECCCCCCccch------------------------------------
Confidence 55555555555555544444443 4445555555555443210
Q ss_pred ceEeccccccccCCCC--CCCCCCCCEEecCCCcccccCCc----cccCCCCCCEEEccCCcccccCCC-CCCceeeecc
Q 003911 243 KEIWLHSNAFSGPLPD--FSGVKQLESLSLRDNFFTGPVPD----SLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMA 315 (787)
Q Consensus 243 ~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~l 315 (787)
+.++. +..+++|++|+|++|+|+ .+|. .+..+++|++|+|++|++++..|. +..+.
T Consensus 186 -----------~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~----- 248 (310)
T 4glp_A 186 -----------GLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM----- 248 (310)
T ss_dssp -----------HHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC-----
T ss_pred -----------hhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc-----
Confidence 01111 234555555555555554 2222 134555666666666665554332 11110
Q ss_pred ccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCC
Q 003911 316 KGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKS 395 (787)
Q Consensus 316 ~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~ 395 (787)
..++|+.|+|++|+++ .+|..+. ++
T Consensus 249 ----------------------------------------------------~~~~L~~L~Ls~N~l~-~lp~~~~--~~ 273 (310)
T 4glp_A 249 ----------------------------------------------------WSSALNSLNLSFAGLE-QVPKGLP--AK 273 (310)
T ss_dssp ----------------------------------------------------CCTTCCCEECCSSCCC-SCCSCCC--SC
T ss_pred ----------------------------------------------------CcCcCCEEECCCCCCC-chhhhhc--CC
Confidence 0125556666666666 4555553 67
Q ss_pred CCEEecccccccccCCccCcCCCCCCeeeccCCcccc
Q 003911 396 LQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 432 (787)
Q Consensus 396 L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 432 (787)
|+.|+|++|+|++ +|. +..+++|++|+|++|+|+.
T Consensus 274 L~~L~Ls~N~l~~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 274 LRVLDLSSNRLNR-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CSCEECCSCCCCS-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred CCEEECCCCcCCC-Cch-hhhCCCccEEECcCCCCCC
Confidence 8888888888885 343 6777888888888888864
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=3.9e-26 Score=247.20 Aligned_cols=259 Identities=16% Similarity=0.221 Sum_probs=142.1
Q ss_pred EEeecCCCCCCCCCCCCC-CCCcEEEcccccCCcCCC----ccccCCC-CCcEEEccCCCCCCCCCChhhhcC-----CC
Q 003911 97 LELQWNSISGPLPSLNGL-ASLEVVMLSNNQFTSVPS----DFFTGLS-SLQSIEIDNNPFSSWEIPQSLRNA-----SG 165 (787)
Q Consensus 97 L~L~~N~l~~~~~~~~~l-~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~p~~~~~l-----~~ 165 (787)
++|++|++++.+|.+..+ ++|++|+|++|+|++.++ ..|.+++ +|++|+|++|++.. ..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~-~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGF-KNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGG-SCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCH-HHHHHHHHHHhccCCC
Confidence 445555555555543322 225555555555555554 4455555 55555555555553 334444443 55
Q ss_pred CCEEeccCceecccCCCCCCC--CCC-CCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCcccccc-Ccc
Q 003911 166 LQNFSANSANITGQIPSFFGP--DEF-PGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQN-MTS 241 (787)
Q Consensus 166 L~~L~l~~n~l~~~~p~~~~~--~~l-~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~-l~~ 241 (787)
|++|++++|.+++..+..+.. ..+ ++|++|+|++|++++..+..+. ..+.. .++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~----------------------~~l~~~~~~ 139 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFK----------------------QAFSNLPAS 139 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH----------------------HHHTTSCTT
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHH----------------------HHHHhCCCc
Confidence 666666666655544432210 022 5666666666666654443332 11223 246
Q ss_pred CceEeccccccccCCC-----CCCCCC-CCCEEecCCCcccccCCcccc----CC-CCCCEEEccCCcccccCCCCCCce
Q 003911 242 LKEIWLHSNAFSGPLP-----DFSGVK-QLESLSLRDNFFTGPVPDSLV----KL-ESLKIVNMTNNLLQGPVPEFDRSV 310 (787)
Q Consensus 242 L~~L~L~~N~l~~~~~-----~~~~l~-~L~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~Ls~N~l~~~~p~~~~~~ 310 (787)
|++|+|++|+++.... .+..++ +|++|+|++|+|++..+..+. .+ ++|++|+|++|++++....
T Consensus 140 L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~----- 214 (362)
T 3goz_A 140 ITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA----- 214 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH-----
T ss_pred eeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH-----
Confidence 6677777776664322 123333 677777777777765554443 33 4777777777776642110
Q ss_pred eeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccC-CCceEEEEccCCcccccCc--
Q 003911 311 SLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCT-KGNITVINFQKMNLTGTIS-- 387 (787)
Q Consensus 311 ~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~L~Ls~N~l~g~~p-- 387 (787)
.+.. .+.. .++|+.|+|++|++++..+
T Consensus 215 ------------------------~l~~--------------------------~l~~~~~~L~~L~Ls~N~l~~~~~~~ 244 (362)
T 3goz_A 215 ------------------------ELAY--------------------------IFSSIPNHVVSLNLCLNCLHGPSLEN 244 (362)
T ss_dssp ------------------------HHHH--------------------------HHHHSCTTCCEEECCSSCCCCCCHHH
T ss_pred ------------------------HHHH--------------------------HHhcCCCCceEEECcCCCCCcHHHHH
Confidence 0000 0001 1367777777777776544
Q ss_pred --hhhcCCCCCCEEeccccccccc-------CCccCcCCCCCCeeeccCCccccc
Q 003911 388 --PEFASFKSLQRLILADNNLSGM-------IPEGLSVLGALKELDVSNNQLYGK 433 (787)
Q Consensus 388 --~~~~~l~~L~~L~Ls~N~l~g~-------ip~~l~~l~~L~~L~Ls~N~l~g~ 433 (787)
..+..+++|+.|+|++|++.+. ++..+..+++|++||+++|++.+.
T Consensus 245 l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 245 LKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3345677888888888885432 344677788888888888888765
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=4e-24 Score=217.16 Aligned_cols=195 Identities=20% Similarity=0.240 Sum_probs=173.0
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCC-CCCCCC-CCCCCCCCcEEEccc-ccCCcCCCccccCCCCCcEE
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNS-ISGPLP-SLNGLASLEVVMLSN-NQFTSVPSDFFTGLSSLQSI 144 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~-~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 144 (787)
..++.|++++|++++..+..|.++++|++|+|++|+ ++++++ .|.++++|++|+|++ |+++++++..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999997777799999999999999997 988777 799999999999999 99999999999999999999
Q ss_pred EccCCCCCCCCCChhhhcCCCCC---EEeccCc-eecccCCCCCCCCCCCCCc-EEeccccccccCCCcCccccccccee
Q 003911 145 EIDNNPFSSWEIPQSLRNASGLQ---NFSANSA-NITGQIPSFFGPDEFPGLT-ILHLAFNQLIGGLPASFSGSQIQSLW 219 (787)
Q Consensus 145 ~L~~N~l~~~~~p~~~~~l~~L~---~L~l~~n-~l~~~~p~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~~l~~L~ 219 (787)
+|++|+++ .+|. +..+++|+ +|++++| ++++..+..|. .+++|+ +|+|++|+++...+..|
T Consensus 111 ~l~~n~l~--~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~--~l~~L~~~L~l~~n~l~~i~~~~~--------- 176 (239)
T 2xwt_C 111 GIFNTGLK--MFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQ--GLCNETLTLKLYNNGFTSVQGYAF--------- 176 (239)
T ss_dssp EEEEECCC--SCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTT--TTBSSEEEEECCSCCCCEECTTTT---------
T ss_pred eCCCCCCc--cccc-cccccccccccEEECCCCcchhhcCccccc--chhcceeEEEcCCCCCcccCHhhc---------
Confidence 99999999 4776 88888888 9999999 99988888886 899999 99999999984333333
Q ss_pred eccCCCCCcCCCCccccccCccCceEeccccc-cccCCCC-CCCC-CCCCEEecCCCcccccCCccccCCCCCCEEEccC
Q 003911 220 VNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA-FSGPLPD-FSGV-KQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTN 296 (787)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~-~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 296 (787)
..++|++|+|++|+ +++.++. |.++ ++|+.|+|++|+|+ .+|.. .+++|+.|++++
T Consensus 177 ------------------~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 177 ------------------NGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARN 235 (239)
T ss_dssp ------------------TTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTT
T ss_pred ------------------CCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccC
Confidence 23799999999995 9987764 8889 99999999999999 56654 688999999987
Q ss_pred C
Q 003911 297 N 297 (787)
Q Consensus 297 N 297 (787)
+
T Consensus 236 ~ 236 (239)
T 2xwt_C 236 T 236 (239)
T ss_dssp C
T ss_pred c
Confidence 6
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=2.5e-24 Score=227.79 Aligned_cols=226 Identities=19% Similarity=0.227 Sum_probs=117.0
Q ss_pred CEEEEEeCCCCccccCC---CCCCCCCCCcEEEeecCCCCCCCC-CC--CCCCCCcEEEcccccCCcCCC----ccccCC
Q 003911 69 RITRIQIGHQNLQGTLP---SNLQNLTKLERLELQWNSISGPLP-SL--NGLASLEVVMLSNNQFTSVPS----DFFTGL 138 (787)
Q Consensus 69 ~v~~L~l~~~~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~-~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l 138 (787)
+++.+.+.+..++...- ..+..+++|++|+|++|.+++..| .+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 35555565555542100 011223446666666666665554 34 556666666666666665333 233456
Q ss_pred CCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecc---cCCCCCCCCCCCCCcEEeccccccccCCCcCcccccc
Q 003911 139 SSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITG---QIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQI 215 (787)
Q Consensus 139 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~---~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l 215 (787)
++|++|+|++|++.. ..|..+..+++|++|++++|++.+ ..+..+ ...+++|++|+|++|+++. +|....
T Consensus 145 ~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~---- 217 (310)
T 4glp_A 145 PGLKVLSIAQAHSPA-FSCEQVRAFPALTSLDLSDNPGLGERGLMAALC-PHKFPAIQNLALRNTGMET-PTGVCA---- 217 (310)
T ss_dssp SCCCEEEEECCSSCC-CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSC-TTSSCCCCSCBCCSSCCCC-HHHHHH----
T ss_pred cCCCEEEeeCCCcch-hhHHHhccCCCCCEEECCCCCCccchhhhHHHh-hhcCCCCCEEECCCCCCCc-hHHHHH----
Confidence 666666666666654 344556666666666666666543 222221 1255666666666666641 111000
Q ss_pred cceeeccCCCCCcCCCCccccccCccCceEeccccccccCC-CCCCCC---CCCCEEecCCCcccccCCccccCCCCCCE
Q 003911 216 QSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL-PDFSGV---KQLESLSLRDNFFTGPVPDSLVKLESLKI 291 (787)
Q Consensus 216 ~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 291 (787)
..++++++|++|+|++|++++.. +.+..+ ++|++|+|++|+|+ .+|..+. ++|++
T Consensus 218 ------------------~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~ 276 (310)
T 4glp_A 218 ------------------ALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRV 276 (310)
T ss_dssp ------------------HHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSC
T ss_pred ------------------HHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCE
Confidence 00234556666666666666552 233333 46666666666666 4555543 56666
Q ss_pred EEccCCcccccCCCCCCceeeeccccCCCccC
Q 003911 292 VNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCL 323 (787)
Q Consensus 292 L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~ 323 (787)
|+|++|+|++. |.+..+.+|+.+++++|.+.
T Consensus 277 L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 277 LDLSSNRLNRA-PQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp EECCSCCCCSC-CCTTSCCCCSCEECSSTTTS
T ss_pred EECCCCcCCCC-chhhhCCCccEEECcCCCCC
Confidence 66666666653 22444555555666655543
No 335
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.7e-23 Score=220.87 Aligned_cols=190 Identities=24% Similarity=0.349 Sum_probs=101.1
Q ss_pred CEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccC
Q 003911 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (787)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 148 (787)
+++.|++++++++. +| .+..+++|++|+|++|+|++.++ +.++++|++|+|++|++++++ .+..+++|++|+|++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS--AIAGLQSIKTLDLTS 116 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEEECTT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch--hhcCCCCCCEEECCC
Confidence 45566666665552 33 45555666666666666655444 555666666666666665543 355566666666666
Q ss_pred CCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCc
Q 003911 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAK 228 (787)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~ 228 (787)
|+++. ++. +..+++|++|++++|.+++..+ +. .+++|++|+|++|++++..+ +
T Consensus 117 n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~--l~--~l~~L~~L~l~~n~l~~~~~--l------------------ 169 (308)
T 1h6u_A 117 TQITD--VTP-LAGLSNLQVLYLDLNQITNISP--LA--GLTNLQYLSIGNAQVSDLTP--L------------------ 169 (308)
T ss_dssp SCCCC--CGG-GTTCTTCCEEECCSSCCCCCGG--GG--GCTTCCEEECCSSCCCCCGG--G------------------
T ss_pred CCCCC--chh-hcCCCCCCEEECCCCccCcCcc--cc--CCCCccEEEccCCcCCCChh--h------------------
Confidence 65553 222 5555555555555555554433 32 45555555555555543211 1
Q ss_pred CCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccc
Q 003911 229 LGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG 301 (787)
Q Consensus 229 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 301 (787)
..+++|+.|+|++|++++.++ +..+++|++|+|++|++++.. .+..+++|+.|+|++|++++
T Consensus 170 --------~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 170 --------ANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp --------TTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred --------cCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 245555555555555554333 445555555555555555322 15555555555555555543
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=9.4e-23 Score=208.59 Aligned_cols=177 Identities=23% Similarity=0.281 Sum_probs=131.7
Q ss_pred CCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEecc
Q 003911 93 KLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSAN 172 (787)
Q Consensus 93 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~ 172 (787)
..++++++++.++..++.+. ++|++|+|++|+++++++..|.++++|++|+|++|+++
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------------------- 72 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-------------------- 72 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC--------------------
T ss_pred CCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC--------------------
Confidence 34566666666665554443 45666666666666666655666666666666666555
Q ss_pred CceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEecccccc
Q 003911 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAF 252 (787)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l 252 (787)
+..+..|. .+++|++|+|++|++++..+..|. .+++|++|+|++|+|
T Consensus 73 -----~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~--------------------------~l~~L~~L~L~~N~l 119 (251)
T 3m19_A 73 -----TLSAGVFD--DLTELGTLGLANNQLASLPLGVFD--------------------------HLTQLDKLYLGGNQL 119 (251)
T ss_dssp -----CCCTTTTT--TCTTCCEEECTTSCCCCCCTTTTT--------------------------TCTTCCEEECCSSCC
T ss_pred -----ccCHhHhc--cCCcCCEEECCCCcccccChhHhc--------------------------ccCCCCEEEcCCCcC
Confidence 44555554 677777777777777755554443 678888999999999
Q ss_pred ccCCCC-CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC-CCCceeeeccccCCCccCC
Q 003911 253 SGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLP 324 (787)
Q Consensus 253 ~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~l~~~~n~~~~ 324 (787)
++.++. |..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++. +..+.+|+.+++++|.+.-
T Consensus 120 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 120 KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 887775 78899999999999999977777899999999999999999998884 6678889999999997653
No 337
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=4e-26 Score=244.66 Aligned_cols=211 Identities=13% Similarity=0.210 Sum_probs=147.9
Q ss_pred CCCCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCC--CCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcC-C
Q 003911 55 DPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNL--TKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSV-P 131 (787)
Q Consensus 55 ~~C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~-~ 131 (787)
-|.+|.++.|+ ...++.++++++++. +..+..+ ++++.|++++|.+++.++.+.++++|++|+|++|.+++. .
T Consensus 35 vc~~W~~~~~~-~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 35 VCKRWYRLASD-ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp SCHHHHHHHTC-STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHHHHhcC-chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHH
Confidence 34479998875 345788999998877 4556666 889999999999999888888899999999999988864 5
Q ss_pred CccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCc-eeccc-CCCCCCCCCCCCCcEEecccc-ccccC-CC
Q 003911 132 SDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSA-NITGQ-IPSFFGPDEFPGLTILHLAFN-QLIGG-LP 207 (787)
Q Consensus 132 ~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~~~l~~L~~L~L~~N-~l~~~-~p 207 (787)
+..+.++++|++|+|++|++++ ..|..+..+++|++|++++| .+++. ++..+. .+++|++|+|++| ++++. ++
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~-~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~--~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSD-PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS--SCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCH-HHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH--HCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHhhCCCCCEEeCcCcccCH-HHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHh--cCCCCCEEcCCCCCCcChHHHH
Confidence 5668888888888888888775 56777777888888888887 56642 444443 5677777777777 66532 22
Q ss_pred cCcccccccceeeccCCCCCcCCCCccccccCc-cCceEeccccc--cc-c-CCCCCCCCCCCCEEecCCCc-ccccCCc
Q 003911 208 ASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMT-SLKEIWLHSNA--FS-G-PLPDFSGVKQLESLSLRDNF-FTGPVPD 281 (787)
Q Consensus 208 ~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~-~L~~L~L~~N~--l~-~-~~~~~~~l~~L~~L~L~~N~-l~~~~p~ 281 (787)
.. +..++ +|++|+|++|. ++ + .+..+..+++|+.|+|++|. +++..+.
T Consensus 188 ~~--------------------------~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 241 (336)
T 2ast_B 188 VA--------------------------VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ 241 (336)
T ss_dssp HH--------------------------HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGG
T ss_pred HH--------------------------HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHH
Confidence 22 33566 67777777763 33 1 22234456666666666666 5555566
Q ss_pred cccCCCCCCEEEccCCc
Q 003911 282 SLVKLESLKIVNMTNNL 298 (787)
Q Consensus 282 ~l~~l~~L~~L~Ls~N~ 298 (787)
.+..+++|++|+|++|.
T Consensus 242 ~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 242 EFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp GGGGCTTCCEEECTTCT
T ss_pred HHhCCCCCCEeeCCCCC
Confidence 66666666666666664
No 338
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=3.1e-23 Score=218.79 Aligned_cols=198 Identities=20% Similarity=0.325 Sum_probs=174.3
Q ss_pred CCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCC
Q 003911 88 LQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQ 167 (787)
Q Consensus 88 ~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 167 (787)
+.++++|++|++++|.++.. +.+..+++|++|+|++|+++++++ +.++++|++|+|++|+++. + ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l-~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~--~-~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN--V-SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC--C-GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccCc-hhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC--c-hhhcCCCCCC
Confidence 45688999999999999875 579999999999999999999887 9999999999999999985 3 3799999999
Q ss_pred EEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEec
Q 003911 168 NFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWL 247 (787)
Q Consensus 168 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L 247 (787)
+|++++|++++..+ +. .+++|++|+|++|++++..+ +..+++|+.|+|
T Consensus 111 ~L~l~~n~l~~~~~--l~--~l~~L~~L~l~~n~l~~~~~----------------------------l~~l~~L~~L~l 158 (308)
T 1h6u_A 111 TLDLTSTQITDVTP--LA--GLSNLQVLYLDLNQITNISP----------------------------LAGLTNLQYLSI 158 (308)
T ss_dssp EEECTTSCCCCCGG--GT--TCTTCCEEECCSSCCCCCGG----------------------------GGGCTTCCEEEC
T ss_pred EEECCCCCCCCchh--hc--CCCCCCEEECCCCccCcCcc----------------------------ccCCCCccEEEc
Confidence 99999999997543 54 89999999999999985433 337899999999
Q ss_pred cccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCC
Q 003911 248 HSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPG 327 (787)
Q Consensus 248 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~ 327 (787)
++|++++.++ +..+++|+.|+|++|++++. +. +..+++|++|+|++|++++.++ +..+.+|+.+++++|.+...|.
T Consensus 159 ~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 159 GNAQVSDLTP-LANLSKLTTLKADDNKISDI-SP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CSSCCCCCGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEECCCE
T ss_pred cCCcCCCChh-hcCCCCCCEEECCCCccCcC-hh-hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeecCCe
Confidence 9999998666 88999999999999999954 43 8999999999999999998775 7888899999999998877654
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.3e-25 Score=241.13 Aligned_cols=266 Identities=13% Similarity=0.135 Sum_probs=203.1
Q ss_pred EEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-----CCCCCC-CCcEEEcccccCCcCCCccccCC-----CC
Q 003911 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-----SLNGLA-SLEVVMLSNNQFTSVPSDFFTGL-----SS 140 (787)
Q Consensus 72 ~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 140 (787)
..++++++++|.+|..+...++|++|+|++|.|++..+ .|.+++ +|++|+|++|+|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46789999999999888888889999999999998764 477888 89999999999999888777775 99
Q ss_pred CcEEEccCCCCCCCCCChhh----hcC-CCCCEEeccCceecccCCCCCCC--CC-CCCCcEEeccccccccCCCcCccc
Q 003911 141 LQSIEIDNNPFSSWEIPQSL----RNA-SGLQNFSANSANITGQIPSFFGP--DE-FPGLTILHLAFNQLIGGLPASFSG 212 (787)
Q Consensus 141 L~~L~L~~N~l~~~~~p~~~----~~l-~~L~~L~l~~n~l~~~~p~~~~~--~~-l~~L~~L~L~~N~l~~~~p~~~~~ 212 (787)
|++|+|++|+++. ..+..+ ..+ ++|++|++++|.+++..+..+.. .. .++|++|+|++|++++..+..+.
T Consensus 82 L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~- 159 (362)
T 3goz_A 82 VTSLNLSGNFLSY-KSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI- 159 (362)
T ss_dssp CCEEECCSSCGGG-SCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH-
T ss_pred ccEEECcCCcCCh-HHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH-
Confidence 9999999999986 445544 444 89999999999998876654320 12 36999999999999865554432
Q ss_pred ccccceeeccCCCCCcCCCCccccccCc-cCceEeccccccccCCCC-----CCCC-CCCCEEecCCCccccc----CCc
Q 003911 213 SQIQSLWVNGQNGNAKLGGGIDVIQNMT-SLKEIWLHSNAFSGPLPD-----FSGV-KQLESLSLRDNFFTGP----VPD 281 (787)
Q Consensus 213 ~~l~~L~~~~~~~~~~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~-----~~~l-~~L~~L~L~~N~l~~~----~p~ 281 (787)
..+..++ +|++|+|++|++++..+. +..+ ++|++|+|++|+|++. ++.
T Consensus 160 ---------------------~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 160 ---------------------QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp ---------------------HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ---------------------HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 2233455 899999999999887652 4445 5999999999999963 566
Q ss_pred cccC-CCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCC
Q 003911 282 SLVK-LESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS 360 (787)
Q Consensus 282 ~l~~-l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 360 (787)
.+.. .++|++|+|++|++++..+.. +
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~-----------------------------l------------------------ 245 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLEN-----------------------------L------------------------ 245 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHH-----------------------------H------------------------
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHH-----------------------------H------------------------
Confidence 6666 459999999999988643310 0
Q ss_pred CccccccCCCceEEEEccCCccccc-------CchhhcCCCCCCEEecccccccccCCccCc
Q 003911 361 DWIGVTCTKGNITVINFQKMNLTGT-------ISPEFASFKSLQRLILADNNLSGMIPEGLS 415 (787)
Q Consensus 361 ~~~~~~~~~~~L~~L~Ls~N~l~g~-------~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~ 415 (787)
.......++|+.|+|++|.+.+. ++..+..+++|+.|||++|++.+..|..+.
T Consensus 246 --~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 246 --KLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPIS 305 (362)
T ss_dssp --HHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHHH
T ss_pred --HHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHHH
Confidence 00112234788999999985543 334567888899999999999876555443
No 340
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=9.3e-23 Score=219.47 Aligned_cols=204 Identities=18% Similarity=0.233 Sum_probs=155.5
Q ss_pred CCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCc-CCCcc
Q 003911 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTS-VPSDF 134 (787)
Q Consensus 57 C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~-~~~~~ 134 (787)
|+|..|.|+ +++++ .+|..+. +++++|+|++|+|+.+++ +|.++++|++|+|++|++.+ +++.+
T Consensus 9 C~~~~v~C~-----------~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~ 74 (350)
T 4ay9_X 9 CSNRVFLCQ-----------ESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADV 74 (350)
T ss_dssp EETTEEEEE-----------STTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTS
T ss_pred eeCCEEEec-----------CCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhH
Confidence 566666664 45666 6787764 689999999999998777 68999999999999999855 77788
Q ss_pred ccCCCCCcE-EEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccc-cccccCCCcCccc
Q 003911 135 FTGLSSLQS-IEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAF-NQLIGGLPASFSG 212 (787)
Q Consensus 135 ~~~l~~L~~-L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~ 212 (787)
|.++++|++ ++++.|+++. ..|..|..+++|++|++++|+|++..+..+. ...++..|++.+ |++....+..|.
T Consensus 75 f~~L~~l~~~l~~~~N~l~~-l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~--~~~~l~~l~l~~~~~i~~l~~~~f~- 150 (350)
T 4ay9_X 75 FSNLPKLHEIRIEKANNLLY-INPEAFQNLPNLQYLLISNTGIKHLPDVHKI--HSLQKVLLDIQDNINIHTIERNSFV- 150 (350)
T ss_dssp BCSCTTCCEEEEEEETTCCE-ECTTSBCCCTTCCEEEEEEECCSSCCCCTTC--CBSSCEEEEEESCTTCCEECTTSST-
T ss_pred hhcchhhhhhhcccCCcccc-cCchhhhhccccccccccccccccCCchhhc--ccchhhhhhhccccccccccccchh-
Confidence 999988775 6677788885 3467788899999999999988877766654 666778888865 556544444442
Q ss_pred ccccceeeccCCCCCcCCCCccccccC-ccCceEeccccccccCCCCCCCCCCCCEEecCC-CcccccCC-ccccCCCCC
Q 003911 213 SQIQSLWVNGQNGNAKLGGGIDVIQNM-TSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRD-NFFTGPVP-DSLVKLESL 289 (787)
Q Consensus 213 ~~l~~L~~~~~~~~~~~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~-N~l~~~~p-~~l~~l~~L 289 (787)
.+ ..++.|+|++|+|+.+++......+|+.|++++ |.++ .+| ..|..+++|
T Consensus 151 -------------------------~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L 204 (350)
T 4ay9_X 151 -------------------------GLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGP 204 (350)
T ss_dssp -------------------------TSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECC
T ss_pred -------------------------hcchhhhhhccccccccCCChhhccccchhHHhhccCCccc-CCCHHHhccCccc
Confidence 33 457888999999988777766677888888875 6666 555 567888889
Q ss_pred CEEEccCCcccccCC
Q 003911 290 KIVNMTNNLLQGPVP 304 (787)
Q Consensus 290 ~~L~Ls~N~l~~~~p 304 (787)
++|||++|+|+..++
T Consensus 205 ~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 205 VILDISRTRIHSLPS 219 (350)
T ss_dssp SEEECTTSCCCCCCS
T ss_pred chhhcCCCCcCccCh
Confidence 999999888886554
No 341
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=3.4e-23 Score=234.37 Aligned_cols=200 Identities=24% Similarity=0.389 Sum_probs=169.8
Q ss_pred CCC-CCCCC-----CcccE-EEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEc
Q 003911 50 GWS-DTDPC-----KWNHV-VCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVML 122 (787)
Q Consensus 50 ~w~-~~~~C-----~w~gv-~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L 122 (787)
+|. +.++| .|.|+ .|.. ++++.|+|++|+|++ +|..+. ++|++|+|++|+|+.++ ..+++|++|+|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~ip---~~l~~L~~L~L 107 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALISLP---ELPASLEYLDA 107 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCCC---CCCTTCCEEEC
T ss_pred HHhccCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcccc---cccCCCCEEEc
Confidence 353 45678 69999 7864 589999999999996 888774 89999999999999644 56899999999
Q ss_pred ccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEecccccc
Q 003911 123 SNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQL 202 (787)
Q Consensus 123 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l 202 (787)
++|+|+++|. |.+ +|++|+|++|+|++ +|. .+++|+.|++++|.|++ +|. .+++|++|+|++|+|
T Consensus 108 s~N~l~~ip~--l~~--~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~l~~-lp~-----~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 108 CDNRLSTLPE--LPA--SLKHLDVDNNQLTM--LPE---LPALLEYINADNNQLTM-LPE-----LPTSLEVLSVRNNQL 172 (571)
T ss_dssp CSSCCSCCCC--CCT--TCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSC-CCC-----CCTTCCEEECCSSCC
T ss_pred cCCCCCCcch--hhc--CCCEEECCCCcCCC--CCC---cCccccEEeCCCCccCc-CCC-----cCCCcCEEECCCCCC
Confidence 9999999877 655 99999999999995 677 68999999999999997 454 368999999999999
Q ss_pred ccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCC-------CEEecCCCcc
Q 003911 203 IGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQL-------ESLSLRDNFF 275 (787)
Q Consensus 203 ~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L-------~~L~L~~N~l 275 (787)
++ +|. | . ++|+.|+|++|+|+..++ +.. +| +.|+|++|+|
T Consensus 173 ~~-lp~-l---------------------------~-~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 173 TF-LPE-L---------------------------P-ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp SC-CCC-C---------------------------C-TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCC
T ss_pred CC-cch-h---------------------------h-CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcc
Confidence 96 665 4 2 789999999999996665 654 77 9999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCCC
Q 003911 276 TGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 276 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 305 (787)
+ .+|..+..+++|+.|+|++|+|++.+|.
T Consensus 220 ~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 220 T-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp C-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred e-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 9 7999999999999999999999987664
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1e-25 Score=246.33 Aligned_cols=251 Identities=18% Similarity=0.224 Sum_probs=161.6
Q ss_pred cCCCCCCCCCCCcEEEeecCCCCCCCC-----CCCCCCCCcEEEcccccCC---cCCCcc-------ccCCCCCcEEEcc
Q 003911 83 TLPSNLQNLTKLERLELQWNSISGPLP-----SLNGLASLEVVMLSNNQFT---SVPSDF-------FTGLSSLQSIEID 147 (787)
Q Consensus 83 ~~~~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~l~~L~~L~L~~N~l~---~~~~~~-------~~~l~~L~~L~L~ 147 (787)
.++..+..+++|++|+|++|+|+...+ .+..+++|++|+|++|.+. +..|.. |..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 455667777888888888888876422 4677888888888886544 322322 3677888888888
Q ss_pred CCCCCCC---CCChhhhcCCCCCEEeccCceecccCCCCCCC--CCC---------CCCcEEeccccccc-cCCCcCccc
Q 003911 148 NNPFSSW---EIPQSLRNASGLQNFSANSANITGQIPSFFGP--DEF---------PGLTILHLAFNQLI-GGLPASFSG 212 (787)
Q Consensus 148 ~N~l~~~---~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~--~~l---------~~L~~L~L~~N~l~-~~~p~~~~~ 212 (787)
+|++... .+|..+..+++|++|++++|.++...+..+.. ..+ ++|++|+|++|+++ +.+|. +
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-l-- 179 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKE-W-- 179 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHH-H--
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHH-H--
Confidence 8888741 15667778888888888888876544433320 012 67777777777765 22221 0
Q ss_pred ccccceeeccCCCCCcCCCCccccccCccCceEeccccccc--c---CCC-CCCCCCCCCEEecCCCccc----ccCCcc
Q 003911 213 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS--G---PLP-DFSGVKQLESLSLRDNFFT----GPVPDS 282 (787)
Q Consensus 213 ~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~--~---~~~-~~~~l~~L~~L~L~~N~l~----~~~p~~ 282 (787)
...+..+++|++|+|++|+++ | ..+ .+..+++|+.|+|++|+|+ +.+|..
T Consensus 180 --------------------~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 180 --------------------AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp --------------------HHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred --------------------HHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 012345667777777777766 2 233 5666667777777777764 456666
Q ss_pred ccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCc
Q 003911 283 LVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW 362 (787)
Q Consensus 283 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (787)
+..+++|++|+|++|++++....
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~--------------------------------------------------------- 262 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAA--------------------------------------------------------- 262 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHH---------------------------------------------------------
T ss_pred HccCCCcCEEECCCCCCchhhHH---------------------------------------------------------
Confidence 66666666666666665532100
Q ss_pred cccccCCCceEEEEccCCcccccCchhh--cCCCCCCEEecccccccc----cCCccC-cCCCCCCeeeccCCcccccCC
Q 003911 363 IGVTCTKGNITVINFQKMNLTGTISPEF--ASFKSLQRLILADNNLSG----MIPEGL-SVLGALKELDVSNNQLYGKIP 435 (787)
Q Consensus 363 ~~~~~~~~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g----~ip~~l-~~l~~L~~L~Ls~N~l~g~iP 435 (787)
.+|..+ +.+++|+.|+|++|++++ .+|..+ .++++|++|+|++|++++..|
T Consensus 263 ----------------------~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 263 ----------------------AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp ----------------------HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ----------------------HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 134455 337788888888888876 477776 557888888888888876654
No 343
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=2.1e-23 Score=216.45 Aligned_cols=156 Identities=15% Similarity=0.088 Sum_probs=123.3
Q ss_pred HHHHHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccc----------------hhHHHHHHHHHHHHhc
Q 003911 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISG----------------KGLTEFKSEIAVLTKV 648 (787)
Q Consensus 585 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l 648 (787)
+..+......|.+.+.||+|+||.||+|...+|+.||+|+++...... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 344445556788889999999999999988779999999996432111 2356789999999999
Q ss_pred CCCccceEEeEEEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCC
Q 003911 649 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPS 728 (787)
Q Consensus 649 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 728 (787)
+| +++.+++.. +..++||||+++++|.+ +. ......++.|++.||+|||+ .+|+||||||+
T Consensus 162 ~~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~-----------~~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~ 222 (282)
T 1zar_A 162 QG---LAVPKVYAW-EGNAVLMELIDAKELYR-VR-----------VENPDEVLDMILEEVAKFYH---RGIVHGDLSQY 222 (282)
T ss_dssp TT---SSSCCEEEE-ETTEEEEECCCCEEGGG-CC-----------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTT
T ss_pred cC---CCcCeEEec-cceEEEEEecCCCcHHH-cc-----------hhhHHHHHHHHHHHHHHHHH---CCCEeCCCCHH
Confidence 94 555554433 55699999999999987 41 12345799999999999998 89999999999
Q ss_pred CEEECCCCcEEEeecccceecCCCCCceeeeeccccCccccccccc
Q 003911 729 NILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVH 774 (787)
Q Consensus 729 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 774 (787)
|||++ ++.+||+|||+|+. +..|+|||++..
T Consensus 223 NILl~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 223 NVLVS-EEGIWIIDFPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp SEEEE-TTEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred HEEEE-CCcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence 99999 99999999999863 345789998864
No 344
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=9.1e-23 Score=202.35 Aligned_cols=183 Identities=25% Similarity=0.362 Sum_probs=147.0
Q ss_pred CCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccc
Q 003911 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFF 135 (787)
Q Consensus 57 C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~ 135 (787)
|.|.+|.|... +++ .+|..+ .++|++|+|++|+|++.++ .|.++++|++|+|++|+++++++..|
T Consensus 7 C~~~~v~c~~~-----------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (208)
T 2o6s_A 7 CSGTTVECYSQ-----------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF 72 (208)
T ss_dssp EETTEEECCSS-----------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred ECCCEEEecCC-----------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc
Confidence 78999999643 333 456554 3689999999999998777 47899999999999999999999999
Q ss_pred cCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccc
Q 003911 136 TGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQI 215 (787)
Q Consensus 136 ~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l 215 (787)
.++++|++|+|++|+++. ..+..|..+++|++|++++|++++..+..|. .+++|++|+|++|++++..+..+.
T Consensus 73 ~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~---- 145 (208)
T 2o6s_A 73 NKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALNTNQLQSLPDGVFD--KLTQLKDLRLYQNQLKSVPDGVFD---- 145 (208)
T ss_dssp TTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTTT----
T ss_pred CCCCCcCEEECCCCcCCc-cCHhHhcCccCCCEEEcCCCcCcccCHhHhc--cCCcCCEEECCCCccceeCHHHhc----
Confidence 999999999999999985 3345578888999999999988887777775 788888888888888865554443
Q ss_pred cceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCC
Q 003911 216 QSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLES 288 (787)
Q Consensus 216 ~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 288 (787)
.+++|+.|+|++|.+.+. +++|++|+++.|+++|.+|.+++.++.
T Consensus 146 ----------------------~l~~L~~L~l~~N~~~~~------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 146 ----------------------RLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----------------------TCTTCCEEECCSCCBCCC------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----------------------cCCCccEEEecCCCeecC------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 678888888888877643 457788888888888888887776654
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=2.8e-22 Score=215.70 Aligned_cols=177 Identities=16% Similarity=0.126 Sum_probs=130.2
Q ss_pred cEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCC-hhhhcCCCCCE-Eecc
Q 003911 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIP-QSLRNASGLQN-FSAN 172 (787)
Q Consensus 95 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~-L~l~ 172 (787)
+.++.++|+|+.+|..+. +++++|+|++|+|+.+++++|.++++|++|+|++|++.+ .+| ..|.++++|+. +.++
T Consensus 12 ~~v~C~~~~Lt~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~-~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE-VIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCC-EECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCC-ccChhHhhcchhhhhhhccc
Confidence 578899999998766663 689999999999999999999999999999999999875 444 46778887765 6666
Q ss_pred CceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccc-cc
Q 003911 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHS-NA 251 (787)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~-N~ 251 (787)
.|+|+...|..|. .+++|++|++++|++++..+..+. ...++..|++.+ |+
T Consensus 89 ~N~l~~l~~~~f~--~l~~L~~L~l~~n~l~~~~~~~~~--------------------------~~~~l~~l~l~~~~~ 140 (350)
T 4ay9_X 89 ANNLLYINPEAFQ--NLPNLQYLLISNTGIKHLPDVHKI--------------------------HSLQKVLLDIQDNIN 140 (350)
T ss_dssp ETTCCEECTTSBC--CCTTCCEEEEEEECCSSCCCCTTC--------------------------CBSSCEEEEEESCTT
T ss_pred CCcccccCchhhh--hccccccccccccccccCCchhhc--------------------------ccchhhhhhhccccc
Confidence 7888888888886 788888888888888755554432 445666777754 55
Q ss_pred cccCCC-CCCCC-CCCCEEecCCCcccccCCccccCCCCCCEEEccC-CcccccC
Q 003911 252 FSGPLP-DFSGV-KQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTN-NLLQGPV 303 (787)
Q Consensus 252 l~~~~~-~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~ 303 (787)
+...++ .|..+ ..|+.|+|++|+|+ .+|.......+|++|++++ |.++..+
T Consensus 141 i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~ 194 (350)
T 4ay9_X 141 IHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELP 194 (350)
T ss_dssp CCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCC
T ss_pred cccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCC
Confidence 665554 35554 35777777777777 4555555566777777764 4454433
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=5.8e-22 Score=224.27 Aligned_cols=196 Identities=25% Similarity=0.315 Sum_probs=126.1
Q ss_pred CCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEE
Q 003911 116 SLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTIL 195 (787)
Q Consensus 116 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L 195 (787)
+|++|+|++|+|+++|+..+ ++|++|+|++|+|+ .+| ..+++|++|++++|+|++ +|. +. . +|++|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~---~~L~~L~Ls~N~l~--~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~--~--~L~~L 125 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP---PQITVLEITQNALI--SLP---ELPASLEYLDACDNRLST-LPE-LP--A--SLKHL 125 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC---TTCSEEECCSSCCS--CCC---CCCTTCCEEECCSSCCSC-CCC-CC--T--TCCEE
T ss_pred CccEEEeCCCCCCccCHhHc---CCCCEEECcCCCCc--ccc---cccCCCCEEEccCCCCCC-cch-hh--c--CCCEE
Confidence 45555555555555444322 45555555555555 344 334556666666666665 444 43 2 67777
Q ss_pred eccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcc
Q 003911 196 HLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFF 275 (787)
Q Consensus 196 ~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l 275 (787)
+|++|+|++ +|. .+++|+.|+|++|+|++.++ .+++|+.|+|++|+|
T Consensus 126 ~Ls~N~l~~-lp~-----------------------------~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 126 DVDNNQLTM-LPE-----------------------------LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp ECCSSCCSC-CCC-----------------------------CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCC
T ss_pred ECCCCcCCC-CCC-----------------------------cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCC
Confidence 777777775 443 24677788888888877443 567888888888888
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCC
Q 003911 276 TGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKG 355 (787)
Q Consensus 276 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 355 (787)
++ +|. |. ++|++|+|++|+|+..++ +.. +|
T Consensus 173 ~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L------------------------------------------- 202 (571)
T 3cvr_A 173 TF-LPE-LP--ESLEALDVSTNLLESLPA-VPV--RN------------------------------------------- 202 (571)
T ss_dssp SC-CCC-CC--TTCCEEECCSSCCSSCCC-CC------------------------------------------------
T ss_pred CC-cch-hh--CCCCEEECcCCCCCchhh-HHH--hh-------------------------------------------
Confidence 85 666 55 788888888888874333 221 10
Q ss_pred CCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCC
Q 003911 356 NDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGA 419 (787)
Q Consensus 356 ~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~ 419 (787)
......|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+..
T Consensus 203 ----------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 203 ----------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp ---------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred ----------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 001124588888888888 57888888888888888888888888888776543
No 347
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.86 E-value=6.4e-23 Score=240.85 Aligned_cols=225 Identities=16% Similarity=0.180 Sum_probs=107.8
Q ss_pred CChhHHHHHHHHHHhcCCCC---CCCCCC--CCCCCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecC
Q 003911 28 GDDGDAAVMLALKKSLNPPE---SLGWSD--TDPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWN 102 (787)
Q Consensus 28 ~~~~d~~~l~~~k~~~~~~~---~~~w~~--~~~C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N 102 (787)
..+.++++|+++..++..+. ...|.. +.+++|.++.++. .+++.|+|.++++.. ++. ..|+.++|+.|
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~ 201 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQY 201 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCc-chh-----hHhhcCccCcc
Confidence 34568899999998874322 235743 3457899998865 689999999999885 333 34566677777
Q ss_pred CCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCC
Q 003911 103 SISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPS 182 (787)
Q Consensus 103 ~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~ 182 (787)
.|.+ ++++.|++. ++++.|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|.
T Consensus 202 ~i~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~--~l~~~~~~l~~L~~L~Ls~N~l~-~lp~ 264 (727)
T 4b8c_D 202 SIDE-------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF--NISANIFKYDFLTRLYLNGNSLT-ELPA 264 (727)
T ss_dssp ----------------------------------CCCCCCEEECTTSCCS--CCCGGGGGCCSCSCCBCTTSCCS-CCCG
T ss_pred cccC-------------cccccccee-cChhhhccCCCCcEEECCCCCCC--CCChhhcCCCCCCEEEeeCCcCc-ccCh
Confidence 6654 344556655 55666777777777777777777 56777767777777777777777 5666
Q ss_pred CCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCC
Q 003911 183 FFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGV 262 (787)
Q Consensus 183 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l 262 (787)
.|+ .+++|++|+|++|+|+ .+|..|. ++++|++|+|++|.|+.++..|..+
T Consensus 265 ~~~--~l~~L~~L~Ls~N~l~-~lp~~~~--------------------------~l~~L~~L~L~~N~l~~lp~~~~~l 315 (727)
T 4b8c_D 265 EIK--NLSNLRVLDLSHNRLT-SLPAELG--------------------------SCFQLKYFYFFDNMVTTLPWEFGNL 315 (727)
T ss_dssp GGG--GGTTCCEEECTTSCCS-SCCSSGG--------------------------GGTTCSEEECCSSCCCCCCSSTTSC
T ss_pred hhh--CCCCCCEEeCcCCcCC-ccChhhc--------------------------CCCCCCEEECCCCCCCccChhhhcC
Confidence 664 6777777777777777 5565543 6777777777777777655567777
Q ss_pred CCCCEEecCCCcccccCCccccCCCC-CCEEEccCCcccccCCC
Q 003911 263 KQLESLSLRDNFFTGPVPDSLVKLES-LKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 263 ~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~ 305 (787)
++|++|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 316 ~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 316 CNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp TTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 77777777777777777776654322 22356777777766654
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.8e-21 Score=191.59 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=60.1
Q ss_pred cEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCc
Q 003911 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSA 174 (787)
Q Consensus 95 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n 174 (787)
+.++++++.++..+..+ .++|++|+|++|+++++++..|.++++|++|+|++|+++. ..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc-cChhhcCCCCCcCEEECCCC
Confidence 46677777777655444 2467777777777777777777777777777777777663 22233444555555555555
Q ss_pred eecccCCCCCCCCCCCCCcEEeccccccc
Q 003911 175 NITGQIPSFFGPDEFPGLTILHLAFNQLI 203 (787)
Q Consensus 175 ~l~~~~p~~~~~~~l~~L~~L~L~~N~l~ 203 (787)
++++..+..|. .+++|++|+|++|+++
T Consensus 87 ~l~~~~~~~~~--~l~~L~~L~L~~N~l~ 113 (208)
T 2o6s_A 87 QLQSLPNGVFD--KLTQLKELALNTNQLQ 113 (208)
T ss_dssp CCCCCCTTTTT--TCTTCCEEECCSSCCC
T ss_pred cCCccCHhHhc--CccCCCEEEcCCCcCc
Confidence 55444443333 4444444444444444
No 349
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=4e-23 Score=225.72 Aligned_cols=205 Identities=20% Similarity=0.277 Sum_probs=162.6
Q ss_pred CCEEEEEeCCCCcccc----CCCCCCCCCCCcEEEeecCCC---CCCCC-CC-------CCCCCCcEEEcccccCCc---
Q 003911 68 KRITRIQIGHQNLQGT----LPSNLQNLTKLERLELQWNSI---SGPLP-SL-------NGLASLEVVMLSNNQFTS--- 129 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~----~~~~~~~l~~L~~L~L~~N~l---~~~~~-~~-------~~l~~L~~L~L~~N~l~~--- 129 (787)
.+++.|+|++|++++. ++..|..+++|++|+|++|.+ ++.+| .+ ..+++|++|+|++|+++.
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 5799999999999876 445688999999999999755 44444 33 789999999999999998
Q ss_pred -CCCccccCCCCCcEEEccCCCCCCCCC----ChhhhcC---------CCCCEEeccCceec-ccCC---CCCCCCCCCC
Q 003911 130 -VPSDFFTGLSSLQSIEIDNNPFSSWEI----PQSLRNA---------SGLQNFSANSANIT-GQIP---SFFGPDEFPG 191 (787)
Q Consensus 130 -~~~~~~~~l~~L~~L~L~~N~l~~~~~----p~~~~~l---------~~L~~L~l~~n~l~-~~~p---~~~~~~~l~~ 191 (787)
..+..+.++++|++|+|++|.+.. .. +..+..+ ++|++|++++|+++ +.++ ..+. .+++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~-~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~--~~~~ 188 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGP-QAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ--SHRL 188 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHH-HHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH--HCTT
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCH-HHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHH--hCCC
Confidence 355678999999999999999863 22 3334444 99999999999998 4444 3443 6789
Q ss_pred CcEEecccccccc-----CCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccc----cCC-CCCCC
Q 003911 192 LTILHLAFNQLIG-----GLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS----GPL-PDFSG 261 (787)
Q Consensus 192 L~~L~L~~N~l~~-----~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~----~~~-~~~~~ 261 (787)
|++|+|++|+++. ..|.. +..+++|+.|+|++|.++ +.+ ..+..
T Consensus 189 L~~L~L~~n~l~~~g~~~l~~~~--------------------------l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 189 LHTVKMVQNGIRPEGIEHLLLEG--------------------------LAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp CCEEECCSSCCCHHHHHHHHHTT--------------------------GGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred cCEEECcCCCCCHhHHHHHHHHH--------------------------hhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 9999999999872 22223 448899999999999995 333 35788
Q ss_pred CCCCCEEecCCCccccc----CCccccC--CCCCCEEEccCCcccc
Q 003911 262 VKQLESLSLRDNFFTGP----VPDSLVK--LESLKIVNMTNNLLQG 301 (787)
Q Consensus 262 l~~L~~L~L~~N~l~~~----~p~~l~~--l~~L~~L~Ls~N~l~~ 301 (787)
+++|++|+|++|+|++. +|..+.. +++|++|+|++|++++
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 99999999999999976 5677743 8888888888888764
No 350
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.3e-20 Score=189.49 Aligned_cols=154 Identities=19% Similarity=0.262 Sum_probs=139.7
Q ss_pred CCCCCCCCCcccEEEcCC----------CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCc
Q 003911 50 GWSDTDPCKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLE 118 (787)
Q Consensus 50 ~w~~~~~C~w~gv~C~~~----------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~ 118 (787)
.|.+.+.|+|.+|.|... .+++.|+|++|++++..|..|.++++|++|+|++|+|+..++ .|.++++|+
T Consensus 12 ~~~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp CCCTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cCCCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcC
Confidence 345677899999999742 468999999999999889999999999999999999988877 589999999
Q ss_pred EEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEecc
Q 003911 119 VVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLA 198 (787)
Q Consensus 119 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~ 198 (787)
+|+|++|+|+++++..|..+++|++|+|++|+|+ .+|..+..+++|+.|++++|+|++..+..|. .+++|++|+|+
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~ 167 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPHGAFD--RLSSLTHAYLF 167 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCTTTTT--TCTTCCEEECT
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc--ccCcccccCCCCCEEECCCCcCCccCHHHHh--CCCCCCEEEee
Confidence 9999999999999999999999999999999999 7899999999999999999999988887786 89999999999
Q ss_pred ccccccCCC
Q 003911 199 FNQLIGGLP 207 (787)
Q Consensus 199 ~N~l~~~~p 207 (787)
+|.+.+..+
T Consensus 168 ~N~~~c~c~ 176 (229)
T 3e6j_A 168 GNPWDCECR 176 (229)
T ss_dssp TSCBCTTBG
T ss_pred CCCccCCcc
Confidence 999986544
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.5e-20 Score=196.39 Aligned_cols=175 Identities=19% Similarity=0.331 Sum_probs=135.1
Q ss_pred CCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCE
Q 003911 89 QNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQN 168 (787)
Q Consensus 89 ~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~ 168 (787)
..+++|++|++++|.++.. +.+..+++|++|+|++|+++++++ +.++++|++|+|++|+++. +| .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~--~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD--LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC--Ch-hhccCCCCCE
Confidence 4567777777777777755 457777778888888888777766 7777888888888887773 33 3777788888
Q ss_pred EeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEecc
Q 003911 169 FSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLH 248 (787)
Q Consensus 169 L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~ 248 (787)
|++++|++++. +.+. .+++|++|+|++|++++. .. +..+++|+.|+|+
T Consensus 117 L~L~~n~i~~~--~~l~--~l~~L~~L~l~~n~l~~~--~~--------------------------l~~l~~L~~L~L~ 164 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLV--HLPQLESLYLGNNKITDI--TV--------------------------LSRLTKLDTLSLE 164 (291)
T ss_dssp EECTTSCCCCC--GGGG--GCTTCCEEECCSSCCCCC--GG--------------------------GGGCTTCSEEECC
T ss_pred EECCCCcCCCC--hhhc--CCCCCCEEEccCCcCCcc--hh--------------------------hccCCCCCEEEcc
Confidence 88888887764 2343 788888888888888753 22 3478899999999
Q ss_pred ccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCC
Q 003911 249 SNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP 304 (787)
Q Consensus 249 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 304 (787)
+|++++.++ +..+++|+.|+|++|+|++ +| .+..+++|+.|++++|+++..+.
T Consensus 165 ~N~l~~~~~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~~~ 217 (291)
T 1h6t_A 165 DNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKPI 217 (291)
T ss_dssp SSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECCCE
T ss_pred CCccccchh-hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCCcc
Confidence 999988766 8889999999999999984 55 48899999999999999986443
No 352
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.83 E-value=1.5e-22 Score=216.77 Aligned_cols=201 Identities=15% Similarity=0.198 Sum_probs=165.9
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCC-CC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEE
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGP-LP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIE 145 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 145 (787)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++ .+.++++|++|+|++|++++..+..|+.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 6799999999999977665 67899999999999999874 55 588999999999999999987778899999999999
Q ss_pred ccCC-CCCCCCCChhhhcCCCCCEEeccCc-eeccc-CCCCCCCCCCC-CCcEEeccccc--cc-cCCCcCcccccccce
Q 003911 146 IDNN-PFSSWEIPQSLRNASGLQNFSANSA-NITGQ-IPSFFGPDEFP-GLTILHLAFNQ--LI-GGLPASFSGSQIQSL 218 (787)
Q Consensus 146 L~~N-~l~~~~~p~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~~~l~-~L~~L~L~~N~--l~-~~~p~~~~~~~l~~L 218 (787)
|++| .+++..++..+..+++|++|++++| .+++. ++..+. .++ +|++|+|++|. ++ +.+|..
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~--~l~~~L~~L~l~~~~~~~~~~~l~~~--------- 217 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA--HVSETITQLNLSGYRKNLQKSDLSTL--------- 217 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH--HSCTTCCEEECCSCGGGSCHHHHHHH---------
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHH--hcccCCCEEEeCCCcccCCHHHHHHH---------
Confidence 9999 6774236778999999999999999 99864 455564 789 99999999994 44 233332
Q ss_pred eeccCCCCCcCCCCccccccCccCceEeccccc-ccc-CCCCCCCCCCCCEEecCCCc-ccccCCccccCCCCCCEEEcc
Q 003911 219 WVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA-FSG-PLPDFSGVKQLESLSLRDNF-FTGPVPDSLVKLESLKIVNMT 295 (787)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls 295 (787)
+.++++|++|+|++|. +++ .++.+..+++|++|+|++|. ++......+..+++|++|+|+
T Consensus 218 -----------------~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~ 280 (336)
T 2ast_B 218 -----------------VRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 280 (336)
T ss_dssp -----------------HHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred -----------------HhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEecc
Confidence 4478999999999999 664 44568889999999999996 332222367888899999988
Q ss_pred CC
Q 003911 296 NN 297 (787)
Q Consensus 296 ~N 297 (787)
+|
T Consensus 281 ~~ 282 (336)
T 2ast_B 281 GI 282 (336)
T ss_dssp TS
T ss_pred Cc
Confidence 88
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.7e-20 Score=214.73 Aligned_cols=189 Identities=19% Similarity=0.326 Sum_probs=151.4
Q ss_pred EeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCC
Q 003911 74 QIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSS 153 (787)
Q Consensus 74 ~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 153 (787)
.+..+.+...++ +..|++|+.|+|++|.|... +.+..|++|+.|+|++|+|+++++ |..+++|++|+|++|++..
T Consensus 27 ~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~ 101 (605)
T 1m9s_A 27 NLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD 101 (605)
T ss_dssp HTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred hccCCCcccccc--hhcCCCCCEEECcCCCCCCC-hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC
Confidence 344444443333 45678888888888888765 468888888888888888888876 8888889999999888884
Q ss_pred CCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCc
Q 003911 154 WEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGI 233 (787)
Q Consensus 154 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~ 233 (787)
+| .+..+++|+.|+|++|.|++. + .+. .+++|+.|+|++|+|++. ..
T Consensus 102 --l~-~l~~l~~L~~L~Ls~N~l~~l-~-~l~--~l~~L~~L~Ls~N~l~~l--~~------------------------ 148 (605)
T 1m9s_A 102 --LS-SLKDLKKLKSLSLEHNGISDI-N-GLV--HLPQLESLYLGNNKITDI--TV------------------------ 148 (605)
T ss_dssp --CT-TSTTCTTCCEEECTTSCCCCC-G-GGG--GCTTCSEEECCSSCCCCC--GG------------------------
T ss_pred --Ch-hhccCCCCCEEEecCCCCCCC-c-ccc--CCCccCEEECCCCccCCc--hh------------------------
Confidence 34 688888899999999888864 3 344 789999999999998854 22
Q ss_pred cccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC
Q 003911 234 DVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 234 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 305 (787)
+..+++|+.|+|++|+|++.+| +..+++|+.|+|++|+|++ + +.+..+++|+.|+|++|++++.+..
T Consensus 149 --l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 149 --LSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp --GGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred --hcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCcCCccc
Confidence 4478999999999999998877 8889999999999999995 4 4689999999999999999876543
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=9.3e-20 Score=182.03 Aligned_cols=152 Identities=22% Similarity=0.299 Sum_probs=133.9
Q ss_pred EEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC--CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCC
Q 003911 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP--SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (787)
Q Consensus 72 ~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 149 (787)
.+++++++++ .+|..+. ..+++|+|++|+|++.++ .|.++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 6778888888 5787775 457899999999999865 4899999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcC
Q 003911 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (787)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~ 229 (787)
+++. ..+..|..+++|++|++++|+|++..|..|. .+++|++|+|++|+|++..|..|.
T Consensus 92 ~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~------------------ 150 (220)
T 2v70_A 92 RLEN-VQHKMFKGLESLKTLMLRSNRITCVGNDSFI--GLSSVRLLSLYDNQITTVAPGAFD------------------ 150 (220)
T ss_dssp CCCC-CCGGGGTTCSSCCEEECTTSCCCCBCTTSST--TCTTCSEEECTTSCCCCBCTTTTT------------------
T ss_pred ccCc-cCHhHhcCCcCCCEEECCCCcCCeECHhHcC--CCccCCEEECCCCcCCEECHHHhc------------------
Confidence 9996 4566799999999999999999999999987 899999999999999988887764
Q ss_pred CCCccccccCccCceEeccccccccC
Q 003911 230 GGGIDVIQNMTSLKEIWLHSNAFSGP 255 (787)
Q Consensus 230 ~~~~~~~~~l~~L~~L~L~~N~l~~~ 255 (787)
.+++|+.|+|++|.+...
T Consensus 151 --------~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 151 --------TLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp --------TCTTCCEEECCSCCEECS
T ss_pred --------CCCCCCEEEecCcCCcCC
Confidence 678888888888877754
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=3.8e-20 Score=199.89 Aligned_cols=173 Identities=20% Similarity=0.226 Sum_probs=120.1
Q ss_pred EEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCC-CCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCC
Q 003911 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLN-GLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (787)
Q Consensus 72 ~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 149 (787)
.+++++++|+ .+|..+. ..++.|+|++|+|++.++ .|. ++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 5677778887 5777665 458889999999888777 465 8888888888888888888888888888888888888
Q ss_pred CCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcC
Q 003911 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (787)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~ 229 (787)
+|+. ..+..|..+++|+.|+|++|+|++..|..|. .+++|++|+|++|
T Consensus 99 ~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~L~~N----------------------------- 146 (361)
T 2xot_A 99 HLHT-LDEFLFSDLQALEVLLLYNNHIVVVDRNAFE--DMAQLQKLYLSQN----------------------------- 146 (361)
T ss_dssp CCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTT--TCTTCCEEECCSS-----------------------------
T ss_pred cCCc-CCHHHhCCCcCCCEEECCCCcccEECHHHhC--CcccCCEEECCCC-----------------------------
Confidence 8774 2233455555555555555555555555443 4444555555444
Q ss_pred CCCccccccCccCceEeccccccccCCCC-C---CCCCCCCEEecCCCcccccCCccccCCCC--CCEEEccCCccc
Q 003911 230 GGGIDVIQNMTSLKEIWLHSNAFSGPLPD-F---SGVKQLESLSLRDNFFTGPVPDSLVKLES--LKIVNMTNNLLQ 300 (787)
Q Consensus 230 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~---~~l~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~ 300 (787)
+|++.++. | ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|++.
T Consensus 147 ---------------------~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 147 ---------------------QISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ---------------------CCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ---------------------cCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 44443333 2 45778888888888888555567777776 478899999886
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.9e-20 Score=214.40 Aligned_cols=181 Identities=20% Similarity=0.302 Sum_probs=142.1
Q ss_pred CCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEe
Q 003911 91 LTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFS 170 (787)
Q Consensus 91 l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 170 (787)
+..+..++|..+.+...+ .+..|++|+.|+|++|.|+.++ .|..+++|++|+|++|+|.+ ++. +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~-~~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~--~~~-l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD--IKP-LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEE-CHHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCC--CGG-GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCccccc-chhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCC--Chh-hccCCCCCEEE
Confidence 344566677777777654 3667888999999999999886 38899999999999999985 444 88999999999
Q ss_pred ccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEecccc
Q 003911 171 ANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSN 250 (787)
Q Consensus 171 l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N 250 (787)
|++|.|++. | .+. .+++|++|+|++|+|++. + . +..+++|+.|+|++|
T Consensus 94 Ls~N~l~~l-~-~l~--~l~~L~~L~Ls~N~l~~l-~-~--------------------------l~~l~~L~~L~Ls~N 141 (605)
T 1m9s_A 94 LDENKIKDL-S-SLK--DLKKLKSLSLEHNGISDI-N-G--------------------------LVHLPQLESLYLGNN 141 (605)
T ss_dssp CCSSCCCCC-T-TST--TCTTCCEEECTTSCCCCC-G-G--------------------------GGGCTTCSEEECCSS
T ss_pred CcCCCCCCC-h-hhc--cCCCCCEEEecCCCCCCC-c-c--------------------------ccCCCccCEEECCCC
Confidence 999999863 3 454 789999999999998852 2 2 347889999999999
Q ss_pred ccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeee
Q 003911 251 AFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLD 313 (787)
Q Consensus 251 ~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~ 313 (787)
+|++. +.+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. |.+..+.+|+
T Consensus 142 ~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~ 200 (605)
T 1m9s_A 142 KITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLD 200 (605)
T ss_dssp CCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCS
T ss_pred ccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCC
Confidence 99876 678888999999999999986655 88899999999999988764 3333333333
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=2.9e-19 Score=178.43 Aligned_cols=153 Identities=24% Similarity=0.300 Sum_probs=100.8
Q ss_pred cEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCC-ccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccC
Q 003911 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPS-DFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (787)
Q Consensus 95 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (787)
+.+++++|.++.+++.+. ..+++|+|++|+|+++++ ..|.++++|++|+|++|+|+
T Consensus 14 ~~l~~s~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~--------------------- 70 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT--------------------- 70 (220)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC---------------------
T ss_pred CEeEeCCCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC---------------------
Confidence 366666666665544443 234566666666666532 34555555555555555554
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccc
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (787)
+..+..|. .+++|++|+|++|++++..|..|. ++++|++|+|++|+|+
T Consensus 71 ----~i~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~--------------------------~l~~L~~L~Ls~N~l~ 118 (220)
T 2v70_A 71 ----DIEEGAFE--GASGVNEILLTSNRLENVQHKMFK--------------------------GLESLKTLMLRSNRIT 118 (220)
T ss_dssp ----EECTTTTT--TCTTCCEEECCSSCCCCCCGGGGT--------------------------TCSSCCEEECTTSCCC
T ss_pred ----EECHHHhC--CCCCCCEEECCCCccCccCHhHhc--------------------------CCcCCCEEECCCCcCC
Confidence 44555554 666677777777776655554433 6677777777777777
Q ss_pred cCCC-CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccccc
Q 003911 254 GPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 254 ~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
+.+| .|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++.
T Consensus 119 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 119 CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred eECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 7655 477788888888888888877788888888888888888888754
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.7e-19 Score=177.68 Aligned_cols=77 Identities=29% Similarity=0.460 Sum_probs=56.7
Q ss_pred EEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCC
Q 003911 73 IQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPF 151 (787)
Q Consensus 73 L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 151 (787)
+++++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 444556666 5676665 678888888888887666 577788888888888888877777777777777777777776
Q ss_pred C
Q 003911 152 S 152 (787)
Q Consensus 152 ~ 152 (787)
+
T Consensus 93 ~ 93 (220)
T 2v9t_B 93 T 93 (220)
T ss_dssp C
T ss_pred C
Confidence 6
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.7e-19 Score=177.68 Aligned_cols=145 Identities=27% Similarity=0.428 Sum_probs=128.6
Q ss_pred CCcccEEEcCC----------CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccc
Q 003911 57 CKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNN 125 (787)
Q Consensus 57 C~w~gv~C~~~----------~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N 125 (787)
|.|..|.|... ..++.|++++|+|++..+..|..+++|++|+|++|+|++..| .|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 78999999643 369999999999998777899999999999999999999877 7999999999999999
Q ss_pred cCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEecccccccc
Q 003911 126 QFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIG 204 (787)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~ 204 (787)
+|+.+++..|.++++|++|+|++|+|+. ..|..|..+++|+.|++++|+|++..+..|. .+++|++|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS--PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTT--TCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCE-eCHHHcCCCCCCCEEECCCCcCCEECHHHHh--CCCCCCEEEeCCCCcCC
Confidence 9999999999999999999999999996 5577888888888888888888888777775 77888888888888764
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=7.3e-20 Score=191.19 Aligned_cols=169 Identities=24% Similarity=0.384 Sum_probs=150.6
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
.+++.|++++|++.. ++ .+..+++|++|+|++|+|++.++ +.++++|++|+|++|++++++. +..+++|++|+|+
T Consensus 46 ~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 46 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLE 120 (291)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEECT
T ss_pred CcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCChh--hccCCCCCEEECC
Confidence 479999999999984 44 58999999999999999999877 9999999999999999999764 9999999999999
Q ss_pred CCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCC
Q 003911 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (787)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~ 227 (787)
+|+++. + ..+..+++|+.|++++|++++. ..+. .+++|++|+|++|++++..| +
T Consensus 121 ~n~i~~--~-~~l~~l~~L~~L~l~~n~l~~~--~~l~--~l~~L~~L~L~~N~l~~~~~--l----------------- 174 (291)
T 1h6t_A 121 HNGISD--I-NGLVHLPQLESLYLGNNKITDI--TVLS--RLTKLDTLSLEDNQISDIVP--L----------------- 174 (291)
T ss_dssp TSCCCC--C-GGGGGCTTCCEEECCSSCCCCC--GGGG--GCTTCSEEECCSSCCCCCGG--G-----------------
T ss_pred CCcCCC--C-hhhcCCCCCCEEEccCCcCCcc--hhhc--cCCCCCEEEccCCccccchh--h-----------------
Confidence 999995 3 5799999999999999999976 4554 89999999999999986544 3
Q ss_pred cCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccc
Q 003911 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTG 277 (787)
Q Consensus 228 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~ 277 (787)
..+++|+.|+|++|.+++. +.+..+++|+.|++++|+++.
T Consensus 175 ---------~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 175 ---------AGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ---------TTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEEC
T ss_pred ---------cCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcccC
Confidence 3789999999999999975 568999999999999999984
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9.3e-20 Score=196.81 Aligned_cols=148 Identities=20% Similarity=0.272 Sum_probs=126.7
Q ss_pred CCcccEEEcCC----------CCEEEEEeCCCCccccCCCCCC-CCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEccc
Q 003911 57 CKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQ-NLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSN 124 (787)
Q Consensus 57 C~w~gv~C~~~----------~~v~~L~l~~~~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~ 124 (787)
|.|..|.|... ..++.|+|++|+|++..+..+. ++++|++|+|++|+|++.++ .|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 67888999642 3588999999999988788887 99999999999999999887 699999999999999
Q ss_pred ccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCC-CCCCCCcEEeccccccc
Q 003911 125 NQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGP-DEFPGLTILHLAFNQLI 203 (787)
Q Consensus 125 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-~~l~~L~~L~L~~N~l~ 203 (787)
|+|+.+++..|.++++|++|+|++|+|+. ..|..|..+++|+.|+|++|+|++..+..|.. ..+++|++|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccE-ECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 99999999999999999999999999996 45789999999999999999999866655520 14667777777777776
Q ss_pred cC
Q 003911 204 GG 205 (787)
Q Consensus 204 ~~ 205 (787)
+.
T Consensus 177 ~l 178 (361)
T 2xot_A 177 KL 178 (361)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 362
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.4e-19 Score=185.35 Aligned_cols=141 Identities=20% Similarity=0.175 Sum_probs=109.0
Q ss_pred CCcccceeccccceEEEEEEE-eCCcE--EEEEEeecccccc----------------------hhHHHHHHHHHHHHhc
Q 003911 594 NFSEENILGRGGFGTVYKGEL-HDGTK--IAVKRMEAGVISG----------------------KGLTEFKSEIAVLTKV 648 (787)
Q Consensus 594 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l 648 (787)
-|++.+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999987 68999 9999975432110 1123688999999999
Q ss_pred CCCcc--ceEEeEEEeCCeeEEEEEecCC-C----CHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCe
Q 003911 649 RHRHL--VALLGHCLDGNEKLLVFEYMPQ-G----TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH-GLAHQSF 720 (787)
Q Consensus 649 ~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~~~i 720 (787)
.|+++ +.++++ +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| + .+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~---~gi 192 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQE---AEL 192 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHT---SCE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHH---CCE
Confidence 88764 444432 356899999942 4 66655421 224567789999999999999 7 899
Q ss_pred EEcCCCCCCEEECCCCcEEEeecccceecCC
Q 003911 721 IHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (787)
Q Consensus 721 vH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 751 (787)
+||||||+|||+++ .++|+|||+|.....
T Consensus 193 vHrDlkp~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 193 VHADLSEYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp ECSSCSTTSEEESS--SEEECCCTTCEETTS
T ss_pred EeCCCCHHHEEEcC--cEEEEECcccccCCC
Confidence 99999999999988 999999999987643
No 363
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.79 E-value=3.6e-22 Score=231.18 Aligned_cols=324 Identities=15% Similarity=0.076 Sum_probs=214.6
Q ss_pred CCEEEEEeCCCCcccc----CCCCCCCCCCCcEEEeecCCCCCCCC-----CCCCCCCCcEEEcccccCCcCCCccccCC
Q 003911 68 KRITRIQIGHQNLQGT----LPSNLQNLTKLERLELQWNSISGPLP-----SLNGLASLEVVMLSNNQFTSVPSDFFTGL 138 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 138 (787)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++... .+.++++|++|+|++|.+.+++ ..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~-~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV-GFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH-HHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH-HHHhhh
Confidence 5799999999998765 44456778999999999999985332 3567899999999999999976 668999
Q ss_pred CCCcEEEccCCCCC--CCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcC-cc-ccc
Q 003911 139 SSLQSIEIDNNPFS--SWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPAS-FS-GSQ 214 (787)
Q Consensus 139 ~~L~~L~L~~N~l~--~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~-~~~ 214 (787)
++|++|+++.+... ....+..+..+++|+.|+++++. .+.+|..+. .+++|++|+|++|.+++..... +. ..+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~--~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~ 319 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFP--FAAQIRKLDLLYALLETEDHCTLIQKCPN 319 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGG--GGGGCCEEEETTCCCCHHHHHHHHTTCTT
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHh--hcCCCcEEecCCCcCCHHHHHHHHHhCcC
Confidence 99999999864322 11345677788889999888753 345566554 7888999999998876543321 11 145
Q ss_pred ccceeeccCCCCCcCCCCccccccCccCceEecc-----------ccccccC-CCC-CCCCCCCCEEecCCCcccccCCc
Q 003911 215 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLH-----------SNAFSGP-LPD-FSGVKQLESLSLRDNFFTGPVPD 281 (787)
Q Consensus 215 l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~-----------~N~l~~~-~~~-~~~l~~L~~L~L~~N~l~~~~p~ 281 (787)
|+.|++.+. ....+.+..+..+++|++|+|+ .|.+++. ++. ...+++|++|+++.|++++..+.
T Consensus 320 L~~L~L~~~---~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~ 396 (592)
T 3ogk_B 320 LEVLETRNV---IGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLE 396 (592)
T ss_dssp CCEEEEEGG---GHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHH
T ss_pred CCEEeccCc---cCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHH
Confidence 666666521 1111112233567888888888 3555532 112 33477888888888888877777
Q ss_pred cccC-CCCCCEEEcc----CCcccccCCC------CCCceeeeccccCCCc--cCCCCCCCCchhhHHHHHHHHhCCChh
Q 003911 282 SLVK-LESLKIVNMT----NNLLQGPVPE------FDRSVSLDMAKGSNNF--CLPSPGACDPRLNALLSVVKLMGYPQR 348 (787)
Q Consensus 282 ~l~~-l~~L~~L~Ls----~N~l~~~~p~------~~~~~~L~~l~~~~n~--~~~~~~~~~~~~~~l~~~~~~~~~~~~ 348 (787)
.+.. +++|+.|+|+ .|.+++.+.+ +..+.+|+.++++.+. +.. ..+..
T Consensus 397 ~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~---------~~~~~---------- 457 (592)
T 3ogk_B 397 SIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTD---------LGLSY---------- 457 (592)
T ss_dssp HHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCH---------HHHHH----------
T ss_pred HHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccH---------HHHHH----------
Confidence 7765 8888888886 6677654221 2223344444443210 000 00000
Q ss_pred hhcccCCCCCCCCccccccCCCceEEEEccCCcccc-cCchhhcCCCCCCEEeccccccccc-CCccCcCCCCCCeeecc
Q 003911 349 FAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG-TISPEFASFKSLQRLILADNNLSGM-IPEGLSVLGALKELDVS 426 (787)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~-ip~~l~~l~~L~~L~Ls 426 (787)
.....++|+.|+|++|++++ .++..+..+++|++|+|++|++++. ++..+..+++|++|+|+
T Consensus 458 ----------------~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls 521 (592)
T 3ogk_B 458 ----------------IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQ 521 (592)
T ss_dssp ----------------HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEE
T ss_pred ----------------HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECc
Confidence 00123478888888888876 3555567788888888888887654 34445677888888888
Q ss_pred CCccccc
Q 003911 427 NNQLYGK 433 (787)
Q Consensus 427 ~N~l~g~ 433 (787)
+|++++.
T Consensus 522 ~n~it~~ 528 (592)
T 3ogk_B 522 GYRASMT 528 (592)
T ss_dssp SCBCCTT
T ss_pred CCcCCHH
Confidence 8887754
No 364
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.79 E-value=4e-22 Score=230.81 Aligned_cols=225 Identities=13% Similarity=0.138 Sum_probs=131.5
Q ss_pred CCEEEEEeCCCCc---cccCCCCCC------------CCCCCcEEEeecCCCCCCCC-CCCC-CC-CCcEEEccccc-CC
Q 003911 68 KRITRIQIGHQNL---QGTLPSNLQ------------NLTKLERLELQWNSISGPLP-SLNG-LA-SLEVVMLSNNQ-FT 128 (787)
Q Consensus 68 ~~v~~L~l~~~~l---~~~~~~~~~------------~l~~L~~L~L~~N~l~~~~~-~~~~-l~-~L~~L~L~~N~-l~ 128 (787)
.+++.|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+ .+.. ++ +|++|+|++|. ++
T Consensus 73 ~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~ 152 (592)
T 3ogk_B 73 PNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT 152 (592)
T ss_dssp TTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE
T ss_pred CCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC
Confidence 3466777766432 134444444 57778888888777765433 3443 23 37777777765 22
Q ss_pred cC-CCccccCCCCCcEEEccCCCCCCCC---CChhhhcCCCCCEEeccCceec----ccCCCCCCCCCCCCCcEEecccc
Q 003911 129 SV-PSDFFTGLSSLQSIEIDNNPFSSWE---IPQSLRNASGLQNFSANSANIT----GQIPSFFGPDEFPGLTILHLAFN 200 (787)
Q Consensus 129 ~~-~~~~~~~l~~L~~L~L~~N~l~~~~---~p~~~~~l~~L~~L~l~~n~l~----~~~p~~~~~~~l~~L~~L~L~~N 200 (787)
.. .+....++++|++|+|++|.+.+.. ++..+..+++|++|++++|.++ +.++..+. .+++|++|+|++|
T Consensus 153 ~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~--~~~~L~~L~L~~~ 230 (592)
T 3ogk_B 153 TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR--NCRSLVSVKVGDF 230 (592)
T ss_dssp HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH--HCTTCCEEECSSC
T ss_pred HHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh--hCCCCcEEeccCc
Confidence 10 1112346777778888777765411 3345566777777777777776 23333332 5677777887777
Q ss_pred ccccCCCcCccc-ccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccC
Q 003911 201 QLIGGLPASFSG-SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPV 279 (787)
Q Consensus 201 ~l~~~~p~~~~~-~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~ 279 (787)
.+.+ +|..+.. .+|+.|.+...............+..+++|+.|+++++.....+..+..+++|++|+|++|.+++..
T Consensus 231 ~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~ 309 (592)
T 3ogk_B 231 EILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETED 309 (592)
T ss_dssp BGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHH
T ss_pred cHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHH
Confidence 7765 3444432 4566666654333322333344556667777777776544433334555677777777777765443
Q ss_pred C-ccccCCCCCCEEEcc
Q 003911 280 P-DSLVKLESLKIVNMT 295 (787)
Q Consensus 280 p-~~l~~l~~L~~L~Ls 295 (787)
. ..+..+++|++|+|+
T Consensus 310 ~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 310 HCTLIQKCPNLEVLETR 326 (592)
T ss_dssp HHHHHTTCTTCCEEEEE
T ss_pred HHHHHHhCcCCCEEecc
Confidence 3 335667777777777
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1.4e-18 Score=174.62 Aligned_cols=152 Identities=16% Similarity=0.267 Sum_probs=90.7
Q ss_pred cEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCC-hhhhcCCCCCEEeccC
Q 003911 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIP-QSLRNASGLQNFSANS 173 (787)
Q Consensus 95 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~L~l~~ 173 (787)
+.++.++++++.++..+. ++|++|+|++|+|+++++..|.++++|++|+|++|+|.. +| ..|..+++|+.|+|++
T Consensus 22 ~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~--i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA--LPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTCCEEECCS
T ss_pred CEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC--cChhhcccCCCcCEEECCC
Confidence 457777777766555443 667777777777777776667777777777777777653 32 3344444455444444
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccc
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (787)
|+|++..+..|. .+++|++|+|++|+|+
T Consensus 98 N~l~~l~~~~~~----------------------------------------------------~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 98 NQLTVLPSAVFD----------------------------------------------------RLVHLKELFMCCNKLT 125 (229)
T ss_dssp SCCCCCCTTTTT----------------------------------------------------TCTTCCEEECCSSCCC
T ss_pred CcCCccChhHhC----------------------------------------------------cchhhCeEeccCCccc
Confidence 444444443332 4555555555555555
Q ss_pred cCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccccc
Q 003911 254 GPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 254 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 126 ~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 126 ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 4444455566666666666666654445566666666666666666543
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.6e-19 Score=185.53 Aligned_cols=174 Identities=18% Similarity=0.243 Sum_probs=132.2
Q ss_pred CCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEE
Q 003911 90 NLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNF 169 (787)
Q Consensus 90 ~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 169 (787)
++.+++.+++++|.+++.+ .+..+++|++|++++|+++.++ .+..+++|++|+|++|++++ +|. +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~--~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISD--LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC--CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCC--Chh-hccCCCCCEE
Confidence 4556677777777777654 5677778888888888887776 47777888888888888774 444 7778888888
Q ss_pred eccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccc
Q 003911 170 SANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHS 249 (787)
Q Consensus 170 ~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~ 249 (787)
++++|++++. |... . ++|++|+|++|++++. + . +..+++|+.|+|++
T Consensus 91 ~L~~N~l~~l-~~~~---~-~~L~~L~L~~N~l~~~-~-~--------------------------l~~l~~L~~L~Ls~ 137 (263)
T 1xeu_A 91 SVNRNRLKNL-NGIP---S-ACLSRLFLDNNELRDT-D-S--------------------------LIHLKNLEILSIRN 137 (263)
T ss_dssp ECCSSCCSCC-TTCC---C-SSCCEEECCSSCCSBS-G-G--------------------------GTTCTTCCEEECTT
T ss_pred ECCCCccCCc-Cccc---c-CcccEEEccCCccCCC-h-h--------------------------hcCcccccEEECCC
Confidence 8888888764 3322 3 7888888888888753 2 2 34788899999999
Q ss_pred cccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC
Q 003911 250 NAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 250 N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 305 (787)
|++++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|++++|++++.+..
T Consensus 138 N~i~~~-~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~~~ 190 (263)
T 1xeu_A 138 NKLKSI-VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEPVK 190 (263)
T ss_dssp SCCCBC-GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCCEE
T ss_pred CcCCCC-hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCccc
Confidence 998876 4678889999999999999865 6788899999999999998876443
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=5.5e-19 Score=173.29 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=98.5
Q ss_pred CCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCC
Q 003911 112 NGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPG 191 (787)
Q Consensus 112 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~ 191 (787)
..+++|++|++++|.++.++ .+..+++|++|++++|.+.. +..+..+++|++|++++|.+++..|..++ .+++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~~---~~~l~~l~~L~~L~l~~n~l~~~~~~~l~--~l~~ 113 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHATN---YNPISGLSNLERLRIMGKDVTSDKIPNLS--GLTS 113 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCSC---CGGGTTCTTCCEEEEECTTCBGGGSCCCT--TCTT
T ss_pred hhcCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCCc---chhhhcCCCCCEEEeECCccCcccChhhc--CCCC
Confidence 34455555555555555444 25555566666666664432 33556666666666666666666666665 6777
Q ss_pred CcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecC
Q 003911 192 LTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLR 271 (787)
Q Consensus 192 L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~ 271 (787)
|++|+|++|++++..|..+ +.+++|++|+|++|.+.+.++.+..+++|+.|+++
T Consensus 114 L~~L~Ls~n~i~~~~~~~l--------------------------~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 114 LTLLDISHSAHDDSILTKI--------------------------NTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQ 167 (197)
T ss_dssp CCEEECCSSBCBGGGHHHH--------------------------TTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECT
T ss_pred CCEEEecCCccCcHhHHHH--------------------------hhCCCCCEEEccCCCCccccHhhcCCCCCCEEECC
Confidence 7777777777775555443 36777888888887733334567777888888888
Q ss_pred CCcccccCCccccCCCCCCEEEccCCcccc
Q 003911 272 DNFFTGPVPDSLVKLESLKIVNMTNNLLQG 301 (787)
Q Consensus 272 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 301 (787)
+|++++ ++ .+..+++|++|++++|++.+
T Consensus 168 ~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 168 FDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp TBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 888874 44 67788888888888888754
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.3e-21 Score=222.74 Aligned_cols=59 Identities=17% Similarity=0.330 Sum_probs=40.9
Q ss_pred cCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccc
Q 003911 241 SLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG 301 (787)
Q Consensus 241 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 301 (787)
.|+.|+|++|+|++.+ .+..+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++
T Consensus 442 ~L~~L~Ls~n~l~~lp-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 442 DVRVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp TCSEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CceEEEecCCCCCCCc-CccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC
Confidence 4667777777777643 3666777777777777777 667777777777777777776664
No 369
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.77 E-value=4.3e-22 Score=230.65 Aligned_cols=364 Identities=14% Similarity=0.100 Sum_probs=180.2
Q ss_pred CCEEEEEeCCCCccccCCCCCC-CCCCCcEEEeecC-CCCCC-CCC-CCCCCCCcEEEcccccCCcCCCcccc----CCC
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQ-NLTKLERLELQWN-SISGP-LPS-LNGLASLEVVMLSNNQFTSVPSDFFT----GLS 139 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~ 139 (787)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++. +.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4688888888887776666664 5778888888887 44431 333 34678888888888887765544433 566
Q ss_pred CCcEEEccCCC--CCCCCCChhhhcCCCCCEEeccCc-eecccCCCCCCCCCCCCCcEEeccccc-------cccCCCcC
Q 003911 140 SLQSIEIDNNP--FSSWEIPQSLRNASGLQNFSANSA-NITGQIPSFFGPDEFPGLTILHLAFNQ-------LIGGLPAS 209 (787)
Q Consensus 140 ~L~~L~L~~N~--l~~~~~p~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~~~l~~L~~L~L~~N~-------l~~~~p~~ 209 (787)
+|++|+|++|. +....++..+..+++|++|++++| .+++ +|..+. .+++|++|+++.+. +.+. +..
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~--~~~~L~~L~l~~~~~~~~~~~~~~l-~~~ 260 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQ--RAPQLEELGTGGYTAEVRPDVYSGL-SVA 260 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHH--HCTTCSEEECSBCCCCCCHHHHHHH-HHH
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHh--cCCcceEcccccccCccchhhHHHH-HHH
Confidence 88888888886 221011222345688888888877 4443 555554 67777777754432 2221 111
Q ss_pred ccc-ccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC-C-CCCCCCCCEEecCCCccccc-CCccccC
Q 003911 210 FSG-SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-D-FSGVKQLESLSLRDNFFTGP-VPDSLVK 285 (787)
Q Consensus 210 ~~~-~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~-~~~l~~L~~L~L~~N~l~~~-~p~~l~~ 285 (787)
+.+ .+|+.|. +... ......+..+..+++|++|+|++|.+++... . +..+++|+.|++++| ++.. ++.....
T Consensus 261 l~~~~~L~~Ls--~~~~-~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~ 336 (594)
T 2p1m_B 261 LSGCKELRCLS--GFWD-AVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLAST 336 (594)
T ss_dssp HHTCTTCCEEE--CCBT-CCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHH
T ss_pred HhcCCCccccc--CCcc-cchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHh
Confidence 111 1222221 0000 0011112223345666666666666543211 1 334556666666655 3321 1222223
Q ss_pred CCCCCEEEcc---------CCcccccCC-CCC-CceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccC
Q 003911 286 LESLKIVNMT---------NNLLQGPVP-EFD-RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWK 354 (787)
Q Consensus 286 l~~L~~L~Ls---------~N~l~~~~p-~~~-~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 354 (787)
+++|++|+|+ .|.+++... .+. .+.+|+.+....|.+.. ..+..+.........+...+.
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~---------~~~~~l~~~~~~L~~L~L~~~ 407 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTN---------AALITIARNRPNMTRFRLCII 407 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCH---------HHHHHHHHHCTTCCEEEEEES
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCH---------HHHHHHHhhCCCcceeEeecc
Confidence 5555555552 233332100 000 01122222222222110 000000000000000000000
Q ss_pred C--------CCCCC-CccccccCCCceEEEEccCCcccccCchhhcC-CCCCCEEecccccccccCCccC-cCCCCCCee
Q 003911 355 G--------NDPCS-DWIGVTCTKGNITVINFQKMNLTGTISPEFAS-FKSLQRLILADNNLSGMIPEGL-SVLGALKEL 423 (787)
Q Consensus 355 ~--------~~~~~-~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~ip~~l-~~l~~L~~L 423 (787)
+ ..+.. .........++|+.|+|++ ++++..+..++. +++|+.|+|++|.+++..+..+ ..+++|++|
T Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L 486 (594)
T 2p1m_B 408 EPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKL 486 (594)
T ss_dssp STTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEE
T ss_pred cCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEE
Confidence 0 00000 0001122335778888866 666666666665 7778888888888766555444 557788888
Q ss_pred eccCCcccccCC-----CCCCCceeecCCCC
Q 003911 424 DVSNNQLYGKIP-----SFKSNAIVNTDGNP 449 (787)
Q Consensus 424 ~Ls~N~l~g~iP-----~~~~~~~~~~~gn~ 449 (787)
+|++|++++..+ .++.+..+.+.+|+
T Consensus 487 ~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 487 EIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp EEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred ECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 888888754322 14455666666653
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=2e-21 Score=221.22 Aligned_cols=183 Identities=17% Similarity=0.190 Sum_probs=117.0
Q ss_pred CCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEccccc-------------CCcCCCccccCCCCCcEEE-ccCCCCCCC
Q 003911 89 QNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQ-------------FTSVPSDFFTGLSSLQSIE-IDNNPFSSW 154 (787)
Q Consensus 89 ~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~~~ 154 (787)
..+++|+.|+|++|+|+.++++++.+++|+.|++++|. +.+.++..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH--
T ss_pred ccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc--
Confidence 56778888888888887655577888888888887665 5566666777777777777 5555443
Q ss_pred CCCh------hhhc--CCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCC
Q 003911 155 EIPQ------SLRN--ASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGN 226 (787)
Q Consensus 155 ~~p~------~~~~--l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~ 226 (787)
.++. .+.. ...|+.|++++|.|++ +|. ++ .+++|++|+|++|+|+ .+|..++
T Consensus 424 ~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~--~l~~L~~L~Ls~N~l~-~lp~~~~--------------- 483 (567)
T 1dce_A 424 DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LE--QLLLVTHLDLSHNRLR-ALPPALA--------------- 483 (567)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GG--GGTTCCEEECCSSCCC-CCCGGGG---------------
T ss_pred hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-cc--ccccCcEeecCccccc-ccchhhh---------------
Confidence 1111 1111 1246666666666665 343 43 5666666666666666 4554433
Q ss_pred CcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccC-CccccCCCCCCEEEccCCcccccCCC
Q 003911 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPV-PDSLVKLESLKIVNMTNNLLQGPVPE 305 (787)
Q Consensus 227 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~ 305 (787)
++++|+.|+|++|+|++. |.+..+++|+.|+|++|+|++.. |..|..+++|+.|+|++|+|++.+|.
T Consensus 484 -----------~l~~L~~L~Ls~N~l~~l-p~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 484 -----------ALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp -----------GCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred -----------cCCCCCEEECCCCCCCCC-cccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 566677777777777663 36666667777777777776554 66666777777777777766665553
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=9.5e-19 Score=171.61 Aligned_cols=154 Identities=14% Similarity=0.203 Sum_probs=92.6
Q ss_pred CCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCE
Q 003911 89 QNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQN 168 (787)
Q Consensus 89 ~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~ 168 (787)
+.+++|++|++++|.|+..+ .+..+++|++|++++|.++.++ .+..+++|++|+|++|+++. ..|..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNYN--PISGLSNLERLRIMGKDVTS-DKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCCG--GGTTCTTCCEEEEECTTCBG-GGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcch--hhhcCCCCCEEEeECCccCc-ccChhhcCCCCCCE
Confidence 34455666666666665332 5556666666666666554443 35566666666666666654 34555666666666
Q ss_pred EeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEecc
Q 003911 169 FSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLH 248 (787)
Q Consensus 169 L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~ 248 (787)
|++++|.+++..|..++ .+++|++|+|++|++.+.+| . +..+++|++|+++
T Consensus 117 L~Ls~n~i~~~~~~~l~--~l~~L~~L~L~~n~~i~~~~-~--------------------------l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 117 LDISHSAHDDSILTKIN--TLPKVNSIDLSYNGAITDIM-P--------------------------LKTLPELKSLNIQ 167 (197)
T ss_dssp EECCSSBCBGGGHHHHT--TCSSCCEEECCSCTBCCCCG-G--------------------------GGGCSSCCEEECT
T ss_pred EEecCCccCcHhHHHHh--hCCCCCEEEccCCCCccccH-h--------------------------hcCCCCCCEEECC
Confidence 66666666665555554 66777777777776222333 2 3366777777777
Q ss_pred ccccccCCCCCCCCCCCCEEecCCCccc
Q 003911 249 SNAFSGPLPDFSGVKQLESLSLRDNFFT 276 (787)
Q Consensus 249 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~ 276 (787)
+|++++.. .+..+++|+.|++++|+|.
T Consensus 168 ~n~i~~~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 168 FDGVHDYR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp TBCCCCCT-TGGGCSSCCEEEECBC---
T ss_pred CCCCcChH-HhccCCCCCEEEeeCcccC
Confidence 77777543 6667777777777777765
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.2e-18 Score=178.99 Aligned_cols=167 Identities=14% Similarity=0.246 Sum_probs=141.0
Q ss_pred EEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCC
Q 003911 70 ITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (787)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 149 (787)
++.++++++++++.. .+..+++|++|++++|+|+... .+..+++|++|+|++|+|+++++ |.++++|++|+|++|
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCC
Confidence 455667778877443 5788999999999999998654 78899999999999999999887 899999999999999
Q ss_pred CCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcC
Q 003911 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (787)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~ 229 (787)
+++. +|.... ++|+.|++++|++++. + .+. .+++|++|+|++|++++. | .
T Consensus 96 ~l~~--l~~~~~--~~L~~L~L~~N~l~~~-~-~l~--~l~~L~~L~Ls~N~i~~~-~-~-------------------- 145 (263)
T 1xeu_A 96 RLKN--LNGIPS--ACLSRLFLDNNELRDT-D-SLI--HLKNLEILSIRNNKLKSI-V-M-------------------- 145 (263)
T ss_dssp CCSC--CTTCCC--SSCCEEECCSSCCSBS-G-GGT--TCTTCCEEECTTSCCCBC-G-G--------------------
T ss_pred ccCC--cCcccc--CcccEEEccCCccCCC-h-hhc--CcccccEEECCCCcCCCC-h-H--------------------
Confidence 9984 554333 8999999999999875 3 354 899999999999999854 2 2
Q ss_pred CCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCccccc
Q 003911 230 GGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGP 278 (787)
Q Consensus 230 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~ 278 (787)
+..+++|+.|+|++|++++. +.+..+++|+.|++++|++++.
T Consensus 146 ------l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 146 ------LGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ------GGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred ------HccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 34789999999999999987 7789999999999999999954
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=8.3e-20 Score=214.43 Aligned_cols=225 Identities=18% Similarity=0.126 Sum_probs=114.2
Q ss_pred CCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEec
Q 003911 92 TKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSA 171 (787)
Q Consensus 92 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l 171 (787)
+.++.|+|.+|.+..... ..|+.++|++|.|.++ +++.|++. ..|..+..++.|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~~~~-----~~l~~l~Ls~~~i~~~--------------~~~~n~~~--~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQ-----ALLQHKKLSQYSIDED--------------DDIENRMV--MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCcchh-----hHhhcCccCcccccCc--------------ccccccee--cChhhhccCCCCcEEEC
Confidence 557888888888876433 3356677777776543 45567766 56888999999999999
Q ss_pred cCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccc
Q 003911 172 NSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA 251 (787)
Q Consensus 172 ~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 251 (787)
++|.+. .+|..+. .+++|++|+|++|+|+ .+|..|. ++++|+.|+|++|+
T Consensus 232 s~n~l~-~l~~~~~--~l~~L~~L~Ls~N~l~-~lp~~~~--------------------------~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 232 SNLQIF-NISANIF--KYDFLTRLYLNGNSLT-ELPAEIK--------------------------NLSNLRVLDLSHNR 281 (727)
T ss_dssp TTSCCS-CCCGGGG--GCCSCSCCBCTTSCCS-CCCGGGG--------------------------GGTTCCEEECTTSC
T ss_pred CCCCCC-CCChhhc--CCCCCCEEEeeCCcCc-ccChhhh--------------------------CCCCCCEEeCcCCc
Confidence 999998 4555444 7999999999999999 7776654 89999999999999
Q ss_pred cccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCc
Q 003911 252 FSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDP 331 (787)
Q Consensus 252 l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~ 331 (787)
|+.++..|.++++|++|+|++|.|+ .+|..|..+++|++|+|++|+|++.+|.......+
T Consensus 282 l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~------------------- 341 (727)
T 4b8c_D 282 LTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV------------------- 341 (727)
T ss_dssp CSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH-------------------
T ss_pred CCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcch-------------------
Confidence 9976667999999999999999998 88989999999999999999999877752111100
Q ss_pred hhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEecccc-------
Q 003911 332 RLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADN------- 404 (787)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N------- 404 (787)
....|+|++|.++|.+|.. |+.|++++|
T Consensus 342 ---------------------------------------~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~ 376 (727)
T 4b8c_D 342 ---------------------------------------TGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREY 376 (727)
T ss_dssp ---------------------------------------HHHHHHHHHCCCCCCCCCC----------------------
T ss_pred ---------------------------------------hhhHHhhccCcccCcCccc------cceeEeeccccccccc
Confidence 1112556777777777754 345556655
Q ss_pred -cccccCCccCcCCCCCCeeeccCCcccc
Q 003911 405 -NLSGMIPEGLSVLGALKELDVSNNQLYG 432 (787)
Q Consensus 405 -~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 432 (787)
.|.+.++..+..+..+....+++|-+.+
T Consensus 377 ~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 377 DSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -------------------------CCCG
T ss_pred CCccccccchhhcccccceeeeecccccc
Confidence 4444455555666667777777777654
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=9.7e-18 Score=163.54 Aligned_cols=131 Identities=21% Similarity=0.285 Sum_probs=108.4
Q ss_pred EEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCC--CCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccC
Q 003911 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPS--LNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (787)
Q Consensus 71 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 148 (787)
+.+++++++++ .+|..+.. +|++|+|++|+|++.++. |.++++|++|+|++|+|+++++..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 35677777885 78877764 899999999999988773 88999999999999999999888899999999999999
Q ss_pred CCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCC
Q 003911 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (787)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p 207 (787)
|+|++ ..|..|..+++|++|++++|+|++.+|..|. .+++|++|+|++|.+++..+
T Consensus 88 N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKE-ISNKMFLGLHQLKTLNLYDNQISCVMPGSFE--HLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCE-ECSSSSTTCTTCCEEECCSSCCCEECTTSST--TCTTCCEEECTTCCBCCSGG
T ss_pred CcCCc-cCHHHhcCCCCCCEEECCCCcCCeeCHHHhh--cCCCCCEEEeCCCCccCcCc
Confidence 99986 4456688888888888888888888888776 78888888888888876544
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3.7e-17 Score=159.38 Aligned_cols=124 Identities=21% Similarity=0.403 Sum_probs=108.8
Q ss_pred CCcccEEEcCC----------CCEEEEEeCCCCccccCCC-CCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEccc
Q 003911 57 CKWNHVVCIED----------KRITRIQIGHQNLQGTLPS-NLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSN 124 (787)
Q Consensus 57 C~w~gv~C~~~----------~~v~~L~l~~~~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~ 124 (787)
|.|..+.|... .+++.|++++|++++..+. .|+.+++|++|+|++|+|++.+| .|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999643 3788999999999876664 48999999999999999999877 699999999999999
Q ss_pred ccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCC
Q 003911 125 NQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP 181 (787)
Q Consensus 125 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p 181 (787)
|+|+++++..|.++++|++|+|++|+|++ ..|..+..+++|++|++++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCe-eCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999999999999999999999999997 668889999999999999999987654
No 376
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.71 E-value=2e-20 Score=216.64 Aligned_cols=321 Identities=14% Similarity=0.133 Sum_probs=188.9
Q ss_pred CCEEEEEeCCC-Ccccc-CCCCCCCCCCCcEEEeecCCCCCCCC----C-CCCCCCCcEEEcccccCCcCCCcc----cc
Q 003911 68 KRITRIQIGHQ-NLQGT-LPSNLQNLTKLERLELQWNSISGPLP----S-LNGLASLEVVMLSNNQFTSVPSDF----FT 136 (787)
Q Consensus 68 ~~v~~L~l~~~-~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~----~-~~~l~~L~~L~L~~N~l~~~~~~~----~~ 136 (787)
.+++.|+|+++ .++.. ++..+.++++|++|+|++|.+++..+ . ...+++|++|+|++|. ..+.... +.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHH
Confidence 58999999998 55543 44445589999999999999877443 2 3367899999999997 3333333 34
Q ss_pred CCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCce-------eccc-----------------------CCCCCCC
Q 003911 137 GLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSAN-------ITGQ-----------------------IPSFFGP 186 (787)
Q Consensus 137 ~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~-------l~~~-----------------------~p~~~~~ 186 (787)
++++|++|+|++|.... .+|..+..+++|+.|++..+. +.+. ++..+.
T Consensus 209 ~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~- 286 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYS- 286 (594)
T ss_dssp HCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHH-
T ss_pred hCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHH-
Confidence 56999999999983222 467778888888888865442 2211 111111
Q ss_pred CCCCCCcEEeccccccccCCCcC-cc-cccccceeeccCCCCCcCCCCccccccCccCceEeccc---------cccccC
Q 003911 187 DEFPGLTILHLAFNQLIGGLPAS-FS-GSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHS---------NAFSGP 255 (787)
Q Consensus 187 ~~l~~L~~L~L~~N~l~~~~p~~-~~-~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~---------N~l~~~ 255 (787)
.+++|++|+|++|.+++..... +. ..+|+.|++.++. ...+.......+++|++|+|++ |.+++.
T Consensus 287 -~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~~---~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~ 362 (594)
T 2p1m_B 287 -VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYI---EDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362 (594)
T ss_dssp -HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGGG---HHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHH
T ss_pred -hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCcc---CHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHH
Confidence 3456666666666654322111 11 1345555554330 0001111122355666666522 233321
Q ss_pred CC-CC-CCCCCCCEEecCCCcccccCCcccc-CCCCCCEEEcc--C----CcccccCCC------CCCceeeeccccCCC
Q 003911 256 LP-DF-SGVKQLESLSLRDNFFTGPVPDSLV-KLESLKIVNMT--N----NLLQGPVPE------FDRSVSLDMAKGSNN 320 (787)
Q Consensus 256 ~~-~~-~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls--~----N~l~~~~p~------~~~~~~L~~l~~~~n 320 (787)
.. .+ .++++|+.|+++.|++++..+..+. .+++|+.|+|+ + |.+++.+.. +..+.+|+.++++++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~~ 442 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGL 442 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCSS
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecCc
Confidence 10 11 1255666666666666655444444 36666666666 3 344421110 112223333443331
Q ss_pred ccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCcccccc-CCCceEEEEccCCcccccCchhh-cCCCCCCE
Q 003911 321 FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTC-TKGNITVINFQKMNLTGTISPEF-ASFKSLQR 398 (787)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~ 398 (787)
. .. . ...... ..++|+.|+|++|.+++..+..+ ..+++|+.
T Consensus 443 l-~~---------~---------------------------~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~ 485 (594)
T 2p1m_B 443 L-TD---------K---------------------------VFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRK 485 (594)
T ss_dssp C-CH---------H---------------------------HHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCE
T ss_pred c-cH---------H---------------------------HHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCE
Confidence 0 00 0 000011 14589999999999988766666 77999999
Q ss_pred EecccccccccCCc-cCcCCCCCCeeeccCCcccc
Q 003911 399 LILADNNLSGMIPE-GLSVLGALKELDVSNNQLYG 432 (787)
Q Consensus 399 L~Ls~N~l~g~ip~-~l~~l~~L~~L~Ls~N~l~g 432 (787)
|+|++|++++..+. .+..+++|++|++++|+++.
T Consensus 486 L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 486 LEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp EEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred EECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 99999999765544 44568999999999999853
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=3.6e-17 Score=155.87 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=123.0
Q ss_pred CCEEEEEeCCCCcc-ccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQ-GTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.|++++|+++ +.+|..+..+++|++|+|++|.|++. +.+..+++|++|+|++|++++.++..+.++++|++|+|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 57999999999998 88999999999999999999999988 88999999999999999999988888888999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCC---CCCCCCCCCCCcEEeccccccccCCCc
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP---SFFGPDEFPGLTILHLAFNQLIGGLPA 208 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~~~l~~L~~L~L~~N~l~~~~p~ 208 (787)
++|+++++..+..+..+++|+.|++++|.+++..+ ..+. .+++|++|++++|.+. .+|.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~--~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFK--LLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHT--TCSSCCEETTEETTSC-BCCS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHH--hCccCcEecCCCCChh-hccc
Confidence 99999953333789999999999999999998766 4665 8999999999999987 4443
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1.6e-16 Score=152.78 Aligned_cols=134 Identities=21% Similarity=0.356 Sum_probs=115.2
Q ss_pred CCcccEEEcCCCCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccc
Q 003911 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFF 135 (787)
Q Consensus 57 C~w~gv~C~~~~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~ 135 (787)
|.|.+|.|.. ++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+|+++++..|
T Consensus 7 C~~~~l~~~~-----------~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (177)
T 2o6r_A 7 CSGTEIRCNS-----------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF 72 (177)
T ss_dssp EETTEEECCS-----------SCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred eCCCEEEecC-----------CCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc
Confidence 6787777753 4455 4565544 789999999999998877 57999999999999999999999999
Q ss_pred cCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCC
Q 003911 136 TGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (787)
Q Consensus 136 ~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p 207 (787)
.++++|++|+|++|+++. ..+..+..+++|++|++++|++++.++..+. .+++|++|+|++|.+.+..|
T Consensus 73 ~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 73 DKLTKLTILYLHENKLQS-LPNGVFDKLTQLKELALDTNQLKSVPDGIFD--RLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTT--TCTTCCEEECCSSCBCCCHH
T ss_pred cCCCccCEEECCCCCccc-cCHHHhhCCcccCEEECcCCcceEeCHHHhc--CCcccCEEEecCCCeeccCc
Confidence 999999999999999995 4455688999999999999999988777775 89999999999999997655
No 379
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=1.9e-17 Score=175.63 Aligned_cols=150 Identities=13% Similarity=0.122 Sum_probs=105.9
Q ss_pred HHHHhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeeccccc------------chhHH--------HHHHHHHHH
Q 003911 586 QVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS------------GKGLT--------EFKSEIAVL 645 (787)
Q Consensus 586 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~~--------~~~~E~~~l 645 (787)
..+..-..-|++.+.||+|++|.||+|...+|+.||||+++..... ..... ...+|...+
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 3333333449999999999999999999889999999987642111 00111 124566777
Q ss_pred HhcCCCccceEEeEEEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCC
Q 003911 646 TKVRHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDL 725 (787)
Q Consensus 646 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 725 (787)
.++.+.++....-+... ..++||||++|++|.++. ..+....++.|++.+|.|||. .|||||||
T Consensus 168 ~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~-----------~~~~~~~l~~qll~~l~~lH~---~gIVHrDL 231 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVS-----------SVPDPASLYADLIALILRLAK---HGLIHGDF 231 (397)
T ss_dssp HHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCC-----------CCSCHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred HHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhc-----------ccHHHHHHHHHHHHHHHHHHH---CCCcCCCC
Confidence 77754444322222222 247999999998885432 112345688999999999997 89999999
Q ss_pred CCCCEEECCCC----------cEEEeecccceecCC
Q 003911 726 KPSNILLGDDM----------RAKVADFGLVRLAPE 751 (787)
Q Consensus 726 kp~NIll~~~~----------~~kl~DFG~a~~~~~ 751 (787)
||.|||+++++ .+.|+||+-+.....
T Consensus 232 Kp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 232 NEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp STTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred CHHHEEEeCCCCcccccccccceEEEEeCCcccCCC
Confidence 99999998776 389999998765543
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=4e-16 Score=152.01 Aligned_cols=127 Identities=19% Similarity=0.315 Sum_probs=114.9
Q ss_pred EEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCC
Q 003911 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPF 151 (787)
Q Consensus 72 ~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 151 (787)
.+++++++++ .+|..+. ++|++|+|++|+|+.+++.|.++++|++|+|++|+|+++++..|.++++|++|+|++|+|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 5677788888 7787665 689999999999997666899999999999999999999999999999999999999999
Q ss_pred CCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEecccccccc
Q 003911 152 SSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIG 204 (787)
Q Consensus 152 ~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~ 204 (787)
+. ..|..|..+++|++|+|++|+|++..+..|. .+++|++|+|++|.+..
T Consensus 91 ~~-i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 91 RC-IPPRTFDGLKSLRLLSLHGNDISVVPEGAFN--DLSALSHLAIGANPLYC 140 (193)
T ss_dssp CB-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTT--TCTTCCEEECCSSCEEC
T ss_pred CE-eCHHHhCCCCCCCEEECCCCCCCeeChhhhh--cCccccEEEeCCCCeec
Confidence 96 4567899999999999999999988887886 89999999999999975
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.8e-16 Score=150.94 Aligned_cols=136 Identities=18% Similarity=0.178 Sum_probs=88.2
Q ss_pred CCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccce
Q 003911 139 SSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSL 218 (787)
Q Consensus 139 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L 218 (787)
++|++|+|++|+++...+|..+..+++|+.|++++|.+++. ..+. .+++|++|+|++|++++.+|..+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~--~l~~L~~L~Ls~N~l~~~~~~~~-------- 91 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLP--KLPKLKKLELSENRIFGGLDMLA-------- 91 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCC--CCSSCCEEEEESCCCCSCCCHHH--------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhc--cCCCCCEEECcCCcCchHHHHHH--------
Confidence 34444444444444223444445555555555555555544 3443 67777777777777776555443
Q ss_pred eeccCCCCCcCCCCccccccCccCceEeccccccccCC--CCCCCCCCCCEEecCCCcccccCC---ccccCCCCCCEEE
Q 003911 219 WVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL--PDFSGVKQLESLSLRDNFFTGPVP---DSLVKLESLKIVN 293 (787)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~ 293 (787)
.++++|+.|+|++|.+++.+ +.+..+++|+.|++++|++++..+ ..+..+++|++|+
T Consensus 92 ------------------~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 92 ------------------EKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp ------------------HHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEET
T ss_pred ------------------hhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEec
Confidence 25778888888888887754 467778888888888888885444 4788888888888
Q ss_pred ccCCcccccCC
Q 003911 294 MTNNLLQGPVP 304 (787)
Q Consensus 294 Ls~N~l~~~~p 304 (787)
+++|.+...+.
T Consensus 154 l~~n~~~~~~~ 164 (168)
T 2ell_A 154 GYDREDQEAPD 164 (168)
T ss_dssp TEETTSCBCCS
T ss_pred CCCCChhhccc
Confidence 88888775543
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=6.5e-17 Score=150.74 Aligned_cols=129 Identities=16% Similarity=0.204 Sum_probs=110.5
Q ss_pred CCEEEEEeCCCCcc-ccCCCCCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQ-GTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.|++++|+++ +.+|..+..+++|++|+|++|+|++. +.+.++++|++|+|++|++++..+..+.++++|++|+|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 46889999999998 88898889999999999999999887 77889999999999999999977777888999999999
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCC---CCCCCCCCCCCcEEeccc
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP---SFFGPDEFPGLTILHLAF 199 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~~~l~~L~~L~L~~ 199 (787)
++|++++...+..+..+++|++|++++|.+++..+ ..+. .+++|++|++++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~--~l~~L~~L~l~d 149 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFK--LLPQLTYLDGYD 149 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHH--HCTTCCEETTBC
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHH--HCCCcccccCCC
Confidence 99999853234788999999999999999987766 4564 788999998863
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.8e-15 Score=147.45 Aligned_cols=84 Identities=24% Similarity=0.327 Sum_probs=47.3
Q ss_pred cEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEec
Q 003911 118 EVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHL 197 (787)
Q Consensus 118 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L 197 (787)
+++++++|+++.+|...+ ++|++|+|++|+|+ .+|..|..+++|+.|++++|.|++..+..|. .+++|++|+|
T Consensus 13 ~~l~~~~~~l~~ip~~~~---~~l~~L~L~~n~i~--~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~--~l~~L~~L~L 85 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP---RDVTELYLDGNQFT--LVPKELSNYKHLTLIDLSNNRISTLSNQSFS--NMTQLLTLIL 85 (193)
T ss_dssp TEEECTTSCCSSCCSCCC---TTCCEEECCSSCCC--SCCGGGGGCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEEC
T ss_pred CEEEcCCCCCCcCCCCCC---CCCCEEECCCCcCc--hhHHHhhcccCCCEEECCCCcCCEeCHhHcc--CCCCCCEEEC
Confidence 455566666665554422 35666666666665 4555566565666666655555555555554 5555555555
Q ss_pred cccccccCCCc
Q 003911 198 AFNQLIGGLPA 208 (787)
Q Consensus 198 ~~N~l~~~~p~ 208 (787)
++|+|++..|.
T Consensus 86 s~N~l~~i~~~ 96 (193)
T 2wfh_A 86 SYNRLRCIPPR 96 (193)
T ss_dssp CSSCCCBCCTT
T ss_pred CCCccCEeCHH
Confidence 55555544443
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.9e-15 Score=145.25 Aligned_cols=133 Identities=21% Similarity=0.322 Sum_probs=111.0
Q ss_pred CcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccC
Q 003911 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (787)
Q Consensus 94 L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (787)
.+.+++++|+++..+..+. ++|++|+|++|+++++++..|.++++|++|+|++|+++. ..+..+..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE-eChhHccCCCccCEEECCC
Confidence 4789999999998765543 789999999999999999999999999999999999995 3445678999999999999
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccc
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (787)
|+|++.++..|. .+++|++|+|++|++++..+..+. .+++|++|+|++|.+.
T Consensus 86 N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~--------------------------~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 86 NKLQSLPNGVFD--KLTQLKELALDTNQLKSVPDGIFD--------------------------RLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTTT--------------------------TCTTCCEEECCSSCBC
T ss_pred CCccccCHHHhh--CCcccCEEECcCCcceEeCHHHhc--------------------------CCcccCEEEecCCCee
Confidence 999988888776 899999999999999865554433 6777777777777776
Q ss_pred cCCC
Q 003911 254 GPLP 257 (787)
Q Consensus 254 ~~~~ 257 (787)
+..+
T Consensus 138 ~~~~ 141 (177)
T 2o6r_A 138 CSCP 141 (177)
T ss_dssp CCHH
T ss_pred ccCc
Confidence 5443
No 385
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=2.4e-16 Score=167.81 Aligned_cols=229 Identities=11% Similarity=0.098 Sum_probs=122.6
Q ss_pred cCCCccccC--------CCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEecccc
Q 003911 129 SVPSDFFTG--------LSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFN 200 (787)
Q Consensus 129 ~~~~~~~~~--------l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N 200 (787)
.+++.+|.+ +++|++|+|.+ .++. .-+.+|.++++|+.|++.+|.++...+..|. ...++..+.+..+
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~-I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~--~~~~l~~l~~~~~ 158 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKN-IEDAAFKGCDNLKICQIRKKTAPNLLPEALA--DSVTAIFIPLGSS 158 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCE-ECTTTTTTCTTCCEEEBCCSSCCEECTTSSC--TTTCEEEECTTCT
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccc-hhHHHhhcCcccceEEcCCCCccccchhhhc--CCCceEEecCcch
Confidence 445556666 66666666666 5553 2234566666666666666666655555554 4555555554442
Q ss_pred cc----ccCCCcCccc-cccc-ceeeccCCCCCcCCCCc-cccccCccCceEeccccccccCCCCC-CCCCCCCEEecCC
Q 003911 201 QL----IGGLPASFSG-SQIQ-SLWVNGQNGNAKLGGGI-DVIQNMTSLKEIWLHSNAFSGPLPDF-SGVKQLESLSLRD 272 (787)
Q Consensus 201 ~l----~~~~p~~~~~-~~l~-~L~~~~~~~~~~~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~-~~l~~L~~L~L~~ 272 (787)
.. .......|.+ ..++ .+.+.. ...+.... ..--...+++.+.+.++-.......+ ..+++|+.|+|++
T Consensus 159 ~~~~~~~~i~~~~f~~~~~L~~~i~~~~---~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~ 235 (329)
T 3sb4_A 159 DAYRFKNRWEHFAFIEGEPLETTIQVGA---MGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISK 235 (329)
T ss_dssp HHHHTSTTTTTSCEEESCCCEEEEEECT---TCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTT
T ss_pred hhhhccccccccccccccccceeEEecC---CCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCC
Confidence 21 1111111211 0011 000000 00000000 00001233344444333111111111 1257788888888
Q ss_pred CcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcc
Q 003911 273 NFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAEN 352 (787)
Q Consensus 273 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 352 (787)
|+++...+..|.++++|+.|+|++| ++...+.
T Consensus 236 n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~----------------------------------------------- 267 (329)
T 3sb4_A 236 TNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQR----------------------------------------------- 267 (329)
T ss_dssp BCCCEECTTTTTTCTTCCEEECCTT-CCEECTT-----------------------------------------------
T ss_pred CCcceecHhhhhCCCCCCEEECCcc-cceehHH-----------------------------------------------
Confidence 8887555566788888888888777 5433322
Q ss_pred cCCCCCCCCccccccCCCceE-EEEccCCcccccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeec
Q 003911 353 WKGNDPCSDWIGVTCTKGNIT-VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDV 425 (787)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L 425 (787)
.+....+|+ .|++.+ +++..-+..|.++++|+.|+|+.|+++..-+..|.++++|+.++.
T Consensus 268 ------------aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 268 ------------VFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ------------TTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ------------HhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 122233666 777776 666666778888888888888888888666678888888888763
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=7.6e-16 Score=143.43 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=111.7
Q ss_pred CCCCCcEEEeecCCCC-CCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCC
Q 003911 90 NLTKLERLELQWNSIS-GPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQ 167 (787)
Q Consensus 90 ~l~~L~~L~L~~N~l~-~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 167 (787)
..++|++|++++|.++ +.+| .+..+++|++|+|++|+++++ ..|.++++|++|+|++|++++ .+|..+..+++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~ 91 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSG-GLEVLAEKCPNLT 91 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCS-CTHHHHHHCTTCC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccc-hHHHHhhhCCCCC
Confidence 3478999999999998 5555 689999999999999999998 669999999999999999996 4888888999999
Q ss_pred EEeccCceeccc-CCCCCCCCCCCCCcEEeccccccccCCC---cCcccccccceeeccCCCCCcCCCCccccccCccCc
Q 003911 168 NFSANSANITGQ-IPSFFGPDEFPGLTILHLAFNQLIGGLP---ASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLK 243 (787)
Q Consensus 168 ~L~l~~n~l~~~-~p~~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~ 243 (787)
+|++++|.+++. .+..+. .+++|++|++++|++++..+ .. +..+++|+
T Consensus 92 ~L~ls~N~i~~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~--------------------------~~~l~~L~ 143 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLK--KLENLKSLDLFNCEVTNLNDYRENV--------------------------FKLLPQLT 143 (149)
T ss_dssp EEECTTSCCCSHHHHGGGG--GCTTCCEEECTTCGGGGSTTHHHHH--------------------------HHHCTTCC
T ss_pred EEECCCCcCCChHHHHHHh--hCCCCCEEeCcCCcccchHHHHHHH--------------------------HHHCCCcc
Confidence 999999999985 346665 89999999999999997655 23 44788999
Q ss_pred eEeccc
Q 003911 244 EIWLHS 249 (787)
Q Consensus 244 ~L~L~~ 249 (787)
.|++++
T Consensus 144 ~L~l~d 149 (149)
T 2je0_A 144 YLDGYD 149 (149)
T ss_dssp EETTBC
T ss_pred cccCCC
Confidence 998864
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=2.8e-15 Score=143.91 Aligned_cols=130 Identities=15% Similarity=0.250 Sum_probs=113.8
Q ss_pred CCCEEEEEeCCCCccccCCCCCCCCC-CCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEE
Q 003911 67 DKRITRIQIGHQNLQGTLPSNLQNLT-KLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIE 145 (787)
Q Consensus 67 ~~~v~~L~l~~~~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 145 (787)
..+++.|++++|+++ .+|. +..+. +|++|+|++|+|++. +.|.++++|++|+|++|+|+++++..|..+++|++|+
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 357999999999999 4554 55555 999999999999987 7899999999999999999999988889999999999
Q ss_pred ccCCCCCCCCCCh--hhhcCCCCCEEeccCceecccCCCC----CCCCCCCCCcEEecccccccc
Q 003911 146 IDNNPFSSWEIPQ--SLRNASGLQNFSANSANITGQIPSF----FGPDEFPGLTILHLAFNQLIG 204 (787)
Q Consensus 146 L~~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~----~~~~~l~~L~~L~L~~N~l~~ 204 (787)
|++|+|. .+|. .+..+++|+.|++++|.++.. |.. +. .+++|++|+++.|.+..
T Consensus 95 L~~N~i~--~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~--~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 95 LTNNSLV--ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIY--KVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCSCCCC--CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHH--HCTTCSEETTEECCHHH
T ss_pred CCCCcCC--cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHH--HCCccceeCCCcCCHHH
Confidence 9999997 5676 899999999999999999854 543 54 79999999999998763
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=4.2e-15 Score=142.65 Aligned_cols=134 Identities=14% Similarity=0.134 Sum_probs=94.2
Q ss_pred ccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccccc
Q 003911 135 FTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQ 214 (787)
Q Consensus 135 ~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 214 (787)
+.++++|++|+|++|+++ .+|......++|++|++++|.|++. ..+. .+++|++|+|++|+|++..|..
T Consensus 15 ~~~~~~L~~L~l~~n~l~--~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~--~l~~L~~L~Ls~N~l~~~~~~~----- 83 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP--VIENLGATLDQFDAIDFSDNEIRKL--DGFP--LLRRLKTLLVNNNRICRIGEGL----- 83 (176)
T ss_dssp EECTTSCEEEECTTSCCC--SCCCGGGGTTCCSEEECCSSCCCEE--CCCC--CCSSCCEEECCSSCCCEECSCH-----
T ss_pred cCCcCCceEEEeeCCCCc--hhHHhhhcCCCCCEEECCCCCCCcc--cccc--cCCCCCEEECCCCcccccCcch-----
Confidence 445556666666666665 2343222223666666666666654 3444 7788888888888887543332
Q ss_pred ccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC--CCCCCCCCCEEecCCCcccccCCcc----ccCCCC
Q 003911 215 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLESLSLRDNFFTGPVPDS----LVKLES 288 (787)
Q Consensus 215 l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~ 288 (787)
+..+++|+.|+|++|+|+..++ .+..+++|+.|++++|+++ .+|.. +..+++
T Consensus 84 ---------------------~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~ 141 (176)
T 1a9n_A 84 ---------------------DQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQ 141 (176)
T ss_dssp ---------------------HHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTT
T ss_pred ---------------------hhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCc
Confidence 2378888888888888876555 5778899999999999998 56764 889999
Q ss_pred CCEEEccCCcccc
Q 003911 289 LKIVNMTNNLLQG 301 (787)
Q Consensus 289 L~~L~Ls~N~l~~ 301 (787)
|++||+++|.+..
T Consensus 142 L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 142 VRVLDFQKVKLKE 154 (176)
T ss_dssp CSEETTEECCHHH
T ss_pred cceeCCCcCCHHH
Confidence 9999999998764
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.54 E-value=2.6e-13 Score=147.54 Aligned_cols=169 Identities=17% Similarity=0.147 Sum_probs=82.3
Q ss_pred CCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEe
Q 003911 92 TKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFS 170 (787)
Q Consensus 92 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 170 (787)
..++.+.+.+ .++.+.+ +|.+. +|+.+.|.+| ++.+...+|.+. +|+.++|.+ .+.. .-+..|.++++|+.++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~-I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQ-LKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCE-ECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccE-ehHHHhhCcccCCeee
Confidence 4444555432 2333333 45543 4666665544 555555555553 466666554 3332 1234555566666666
Q ss_pred ccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEecccc
Q 003911 171 ANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSN 250 (787)
Q Consensus 171 l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N 250 (787)
+.+|+++......|. ..+|+.+.|..| ++......| .++++|+.++|..|
T Consensus 187 l~~n~l~~I~~~aF~---~~~L~~l~lp~~-l~~I~~~aF--------------------------~~~~~L~~l~l~~~ 236 (401)
T 4fdw_A 187 LSKTKITKLPASTFV---YAGIEEVLLPVT-LKEIGSQAF--------------------------LKTSQLKTIEIPEN 236 (401)
T ss_dssp CTTSCCSEECTTTTT---TCCCSEEECCTT-CCEECTTTT--------------------------TTCTTCCCEECCTT
T ss_pred cCCCcceEechhhEe---ecccCEEEeCCc-hheehhhHh--------------------------hCCCCCCEEecCCC
Confidence 665555555555552 355666655532 332223222 24555555555543
Q ss_pred ccccCCC-CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcc
Q 003911 251 AFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLL 299 (787)
Q Consensus 251 ~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 299 (787)
++.... .|.+ .+|+.+.| .|.++...+..|.++++|+.+++.+|.+
T Consensus 237 -l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 237 -VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp -CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred -ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccc
Confidence 332222 2444 45555555 3334434445555555555555555544
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=4.5e-17 Score=159.74 Aligned_cols=131 Identities=19% Similarity=0.302 Sum_probs=76.8
Q ss_pred cccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccc
Q 003911 134 FFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGS 213 (787)
Q Consensus 134 ~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 213 (787)
.|..+++|++|+|++|+++. +| .+..+++|++|++++|.++ .+|..+. .+++|++|+|++|++++ +| .
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~--l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~~~L~~L~L~~N~l~~-l~-~---- 110 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK--IS-SLSGMENLRILSLGRNLIK-KIENLDA--VADTLEELWISYNQIAS-LS-G---- 110 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC--CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH--HHHHCSEEEEEEEECCC-HH-H----
T ss_pred HHhcCCCCCEEECCCCCCcc--cc-ccccCCCCCEEECCCCCcc-cccchhh--cCCcCCEEECcCCcCCc-CC-c----
Confidence 34444445555555554442 33 4445555555555555554 2333332 34566666666666653 22 1
Q ss_pred cccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC--CCCCCCCCCEEecCCCcccccCCcc---------
Q 003911 214 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLESLSLRDNFFTGPVPDS--------- 282 (787)
Q Consensus 214 ~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~--------- 282 (787)
+..+++|+.|+|++|++++.++ .+..+++|++|++++|++++.+|..
T Consensus 111 ----------------------~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 111 ----------------------IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp ----------------------HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred ----------------------cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 2356777777777777775433 4667778888888888887665543
Q ss_pred -ccCCCCCCEEEccCCccc
Q 003911 283 -LVKLESLKIVNMTNNLLQ 300 (787)
Q Consensus 283 -l~~l~~L~~L~Ls~N~l~ 300 (787)
+..+++|+.|| +|.++
T Consensus 169 ~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHCSSCSEEC--CGGGT
T ss_pred HHHhCCCcEEEC--CcccC
Confidence 77788888876 66665
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=2.5e-14 Score=152.16 Aligned_cols=98 Identities=20% Similarity=0.186 Sum_probs=62.1
Q ss_pred CCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceEeccccccccCCC-CCCCCCCCC-
Q 003911 189 FPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLE- 266 (787)
Q Consensus 189 l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~- 266 (787)
+++|+.|+|++|+++...+..|. ++++|++|+|.+| ++.+.+ .|.++++|+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~--------------------------~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~ 277 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFA--------------------------QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAG 277 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTT--------------------------TCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred cCCCeEEECCCCCcceecHhhhh--------------------------CCCCCCEEECCcc-cceehHHHhhCChhccE
Confidence 56788888888777754444443 6667777777766 554444 366677777
Q ss_pred EEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC-CCCceeeec
Q 003911 267 SLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDM 314 (787)
Q Consensus 267 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~L~~ 314 (787)
.|++.+ +++...+.+|.++++|+.|++++|+++...+. |..+.+|+.
T Consensus 278 ~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 278 TLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp EEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCE
T ss_pred EEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhh
Confidence 777766 56645556677777777777777777665553 444444443
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=4.8e-17 Score=159.53 Aligned_cols=134 Identities=22% Similarity=0.286 Sum_probs=115.6
Q ss_pred CCEEEEEeCCCCccccCCC------CCCCCCCCcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCC
Q 003911 68 KRITRIQIGHQNLQGTLPS------NLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSL 141 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 141 (787)
.+++.++++.+++.|.+|. .|..+++|++|+|++|+|++. |.+.++++|++|+|++|+|+.++. .+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~~~~~l~~L~~L~l~~n~l~~l~~-~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-SSLSGMENLRILSLGRNLIKKIEN-LDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-CCHHHHTTCCEEEEEEEEECSCSS-HHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-cccccCCCCCEEECCCCCcccccc-hhhcCCcC
Confidence 4677778888888888776 899999999999999999985 489999999999999999998764 57788999
Q ss_pred cEEEccCCCCCCCCCChhhhcCCCCCEEeccCceecccCC-CCCCCCCCCCCcEEeccccccccCCCc
Q 003911 142 QSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQLIGGLPA 208 (787)
Q Consensus 142 ~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~L~~N~l~~~~p~ 208 (787)
++|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+. .+++|++|++++|.+++.+|.
T Consensus 96 ~~L~L~~N~l~~--l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~--~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 96 EELWISYNQIAS--LS-GIEKLVNLRVLYMSNNKITNWGEIDKLA--ALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEEEEEECCC--HH-HHHHHHHSSEEEESEEECCCHHHHHHHT--TTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECcCCcCCc--CC-ccccCCCCCEEECCCCcCCchhHHHHHh--cCCCCCEEEecCCcccccccc
Confidence 999999999995 55 68999999999999999987543 4554 899999999999999877664
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=7e-14 Score=133.07 Aligned_cols=105 Identities=23% Similarity=0.318 Sum_probs=81.5
Q ss_pred EEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCC
Q 003911 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (787)
Q Consensus 71 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 149 (787)
+.+++++++++ .+|..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 35677778887 5777664 788999999999998877 5888999999999999999988888888888888888888
Q ss_pred CCCCCCCChhhhcCCCCCEEeccCceeccc
Q 003911 150 PFSSWEIPQSLRNASGLQNFSANSANITGQ 179 (787)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 179 (787)
+|+. ..+..|..+++|++|++++|.++..
T Consensus 89 ~l~~-~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKS-IPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCC-CCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCE-eCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 8884 2234466666666666666666543
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=1.2e-13 Score=131.94 Aligned_cols=103 Identities=23% Similarity=0.426 Sum_probs=83.2
Q ss_pred EEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCC
Q 003911 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (787)
Q Consensus 71 ~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 149 (787)
+.+++++++++ .+|..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57888999886 7887775 889999999999998877 6888999999999999999998888888999999999998
Q ss_pred CCCCCCCCh-hhhcCCCCCEEeccCceecc
Q 003911 150 PFSSWEIPQ-SLRNASGLQNFSANSANITG 178 (787)
Q Consensus 150 ~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~ 178 (787)
+|+. +|. .|..+++|++|++++|.+..
T Consensus 92 ~l~~--l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKS--IPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCC--CCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccce--eCHHHhccccCCCEEEeCCCCccc
Confidence 8884 343 46666666666666666653
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=1.1e-13 Score=131.71 Aligned_cols=109 Identities=18% Similarity=0.239 Sum_probs=98.0
Q ss_pred CcEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccC
Q 003911 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (787)
Q Consensus 94 L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (787)
.+.|++++|+|+.++..+. ++|++|+|++|+|+++++..|.++++|++|+|++|+|+. ..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCc-cChhhccCCCCCCEEECCC
Confidence 5789999999998776664 899999999999999999999999999999999999995 4455679999999999999
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccCCC
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p 207 (787)
|+|++..+..|. .+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~--~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFD--NLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTT--TCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhc--CCCCCCEEEeCCCCCCCCch
Confidence 999998888886 89999999999999986544
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=3e-13 Score=129.14 Aligned_cols=105 Identities=19% Similarity=0.242 Sum_probs=95.2
Q ss_pred cEEEeecCCCCCCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCCh-hhhcCCCCCEEeccC
Q 003911 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQ-SLRNASGLQNFSANS 173 (787)
Q Consensus 95 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~-~~~~l~~L~~L~l~~ 173 (787)
+.+++++|+|+.+++.+. ++|++|+|++|+|+++++..|.++++|++|+|++|+|+. +|. .|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA--IPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc--cChhHhCCcchhhEEECCC
Confidence 789999999987776665 899999999999999999999999999999999999995 554 578999999999999
Q ss_pred ceecccCCCCCCCCCCCCCcEEeccccccccC
Q 003911 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGG 205 (787)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~ 205 (787)
|+|++.++..|. .+++|++|+|++|.+...
T Consensus 91 N~l~~l~~~~~~--~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFD--NLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTT--TCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhc--cccCCCEEEeCCCCcccc
Confidence 999988887786 899999999999999854
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.45 E-value=2.1e-12 Score=140.40 Aligned_cols=261 Identities=10% Similarity=0.121 Sum_probs=175.7
Q ss_pred EEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccC
Q 003911 70 ITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (787)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 148 (787)
++.+.+.+ +++..-..+|.+. +|+.++|..| ++.+.. +|.+ .+|+.+.|.+ .++.+...+|.++++|+.++|++
T Consensus 115 l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~ 189 (401)
T 4fdw_A 115 YNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSK 189 (401)
T ss_dssp CSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTT
T ss_pred ccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCC
Confidence 34444443 4553445677775 7999999877 776655 6888 4799999986 89999999999999999999999
Q ss_pred CCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCc
Q 003911 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAK 228 (787)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~ 228 (787)
|+++ .+|.......+|+.+.+..+ ++.+....|. ++++|+.+++..| ++.....+|.+
T Consensus 190 n~l~--~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~--~~~~L~~l~l~~~-l~~I~~~aF~~---------------- 247 (401)
T 4fdw_A 190 TKIT--KLPASTFVYAGIEEVLLPVT-LKEIGSQAFL--KTSQLKTIEIPEN-VSTIGQEAFRE---------------- 247 (401)
T ss_dssp SCCS--EECTTTTTTCCCSEEECCTT-CCEECTTTTT--TCTTCCCEECCTT-CCEECTTTTTT----------------
T ss_pred Ccce--EechhhEeecccCEEEeCCc-hheehhhHhh--CCCCCCEEecCCC-ccCcccccccc----------------
Confidence 9999 56665555799999999854 7777778886 8999999999875 55455555543
Q ss_pred CCCCccccccCccCceEeccccccccCCC-CCCCCCCCCEEecCCCccc-----ccCCccccCCCCCCEEEccCCccccc
Q 003911 229 LGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFT-----GPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 229 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
.+|+.+.| .|.++.... .|.++++|+.+++.+|.+. ...+..|.++++|+.++|.+ .++..
T Consensus 248 -----------~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I 314 (401)
T 4fdw_A 248 -----------SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRIL 314 (401)
T ss_dssp -----------CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEE
T ss_pred -----------CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEE
Confidence 45555555 333443333 3566666666666665553 24445566666666666653 23322
Q ss_pred CCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcc
Q 003911 303 VPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNL 382 (787)
Q Consensus 303 ~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l 382 (787)
... .+....+|+.|+|..| +
T Consensus 315 ~~~-----------------------------------------------------------aF~~c~~L~~l~lp~~-l 334 (401)
T 4fdw_A 315 GQG-----------------------------------------------------------LLGGNRKVTQLTIPAN-V 334 (401)
T ss_dssp CTT-----------------------------------------------------------TTTTCCSCCEEEECTT-C
T ss_pred hhh-----------------------------------------------------------hhcCCCCccEEEECcc-c
Confidence 211 1111224555555332 4
Q ss_pred cccCchhhcCCCCCCEEecccccccccCCccCcCCC-CCCeeeccCCccc
Q 003911 383 TGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLG-ALKELDVSNNQLY 431 (787)
Q Consensus 383 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~-~L~~L~Ls~N~l~ 431 (787)
+..-+..|.++ +|+.|++++|.+....+..|..++ .++.|++..|.+.
T Consensus 335 ~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 335 TQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 44455667788 888888888888755566677774 6788888777654
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=1e-12 Score=140.80 Aligned_cols=84 Identities=19% Similarity=0.256 Sum_probs=69.2
Q ss_pred CCcccEEEcCCCCEEEEEeCCC-CccccCCCCCCCCCCCcEEEeec-CCCCCCCC-CCCCCCCCcEEEcccccCCcCCCc
Q 003911 57 CKWNHVVCIEDKRITRIQIGHQ-NLQGTLPSNLQNLTKLERLELQW-NSISGPLP-SLNGLASLEVVMLSNNQFTSVPSD 133 (787)
Q Consensus 57 C~w~gv~C~~~~~v~~L~l~~~-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~ 133 (787)
|.|.+|.|. ++ +|+ .+|. |..+++|++|+|++ |+|+++++ .|.+|++|++|+|++|+|+++++.
T Consensus 8 C~~~~v~~~-----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT-----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC-----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC-----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 777777664 33 566 4788 99999999999986 99988876 688899999999999999998888
Q ss_pred cccCCCCCcEEEccCCCCCC
Q 003911 134 FFTGLSSLQSIEIDNNPFSS 153 (787)
Q Consensus 134 ~~~~l~~L~~L~L~~N~l~~ 153 (787)
.|.+|++|++|+|++|+|+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~ 94 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALES 94 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSC
T ss_pred HhcCCcCCCEEeCCCCccce
Confidence 88888888888888888874
No 399
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.33 E-value=5.8e-12 Score=129.18 Aligned_cols=148 Identities=15% Similarity=0.073 Sum_probs=116.0
Q ss_pred HhhcCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEeCCeeE
Q 003911 589 RNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKL 667 (787)
Q Consensus 589 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 667 (787)
......|++...++.|+.+.||++... ++.+++|+...... ....++.+|+++++.+. +..++++++++.+.+..|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 345567988899999999999999754 78999999875321 12346899999999994 677889999999988999
Q ss_pred EEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------
Q 003911 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA------------------------------- 716 (787)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------- 716 (787)
+||||++|.++.+.+. +......++.++++++..||+..
T Consensus 87 lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred EEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 9999999999876531 11223468889999999999721
Q ss_pred -------------------------CCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 717 -------------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 717 -------------------------~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
...++|+|++|.||+++++..+.|+||+.+...
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence 145899999999999987656679999987643
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=7.2e-12 Score=134.15 Aligned_cols=105 Identities=15% Similarity=0.168 Sum_probs=95.2
Q ss_pred cEEEeecC-CCCCCCCCCCCCCCCcEEEccc-ccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEecc
Q 003911 95 ERLELQWN-SISGPLPSLNGLASLEVVMLSN-NQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSAN 172 (787)
Q Consensus 95 ~~L~L~~N-~l~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~ 172 (787)
..++++++ +|+++++ |..+++|++|+|++ |+|+++++..|.+|++|++|+|++|+|++ ..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF-VAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCE-ECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccce-eCHHHhcCCcCCCEEeCC
Confidence 35799998 9998777 99999999999996 99999999999999999999999999997 567889999999999999
Q ss_pred CceecccCCCCCCCCCCCCCcEEecccccccc
Q 003911 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIG 204 (787)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~ 204 (787)
+|+|++.++..|. .++ |++|+|.+|.|..
T Consensus 89 ~N~l~~~~~~~~~--~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQ--GLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTC--SCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcc--cCC-ceEEEeeCCCccC
Confidence 9999988888775 455 9999999999984
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=4e-14 Score=152.42 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=46.1
Q ss_pred ccCccCceEeccccccccCC-----CCCCCCCCCCEEecCCCccccc----CCccccCCCCCCEEEccCCcccc
Q 003911 237 QNMTSLKEIWLHSNAFSGPL-----PDFSGVKQLESLSLRDNFFTGP----VPDSLVKLESLKIVNMTNNLLQG 301 (787)
Q Consensus 237 ~~l~~L~~L~L~~N~l~~~~-----~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 301 (787)
..+++|++|+|++|.|+... ..+...++|+.|+|++|.|+.. ++..+...++|++|+|++|.|+.
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 45677888888888776422 2355567888888888888743 34455567888888888888864
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.23 E-value=3.6e-14 Score=152.76 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=23.5
Q ss_pred CCCCCEEecCCCcccc----cCCccccCCCCCCEEEccCCccc
Q 003911 262 VKQLESLSLRDNFFTG----PVPDSLVKLESLKIVNMTNNLLQ 300 (787)
Q Consensus 262 l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 300 (787)
.++|+.|+|++|.|+. .++..+..+++|++|+|++|.|+
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 4556666666666653 23444456666777777777665
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.21 E-value=1.7e-11 Score=125.51 Aligned_cols=140 Identities=19% Similarity=0.162 Sum_probs=103.0
Q ss_pred cCCCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCc--cceEEeEEEeCCeeEEE
Q 003911 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALLGHCLDGNEKLLV 669 (787)
Q Consensus 592 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv 669 (787)
...|.+....+.|..+.||++...+|+.+++|+.... ....+.+|+++++.+.+.+ +++++++...++..++|
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 3455554444466679999998777888999987542 2246788999999985444 56788888888889999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA--------------------------------- 716 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------------------- 716 (787)
|||++|.++. . . ..+ ...++.++++.+..||+..
T Consensus 94 ~e~i~G~~l~--~-~-------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T 1nd4_A 94 LGEVPGQDLL--S-S-------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE 160 (264)
T ss_dssp EECCSSEETT--T-S-------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCG
T ss_pred EEecCCcccC--c-C-------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhh
Confidence 9999998873 2 0 111 1256777788888888632
Q ss_pred ----------------------CCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 717 ----------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 717 ----------------------~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
...++|+|++|.||++++++.+.|+|||.+...
T Consensus 161 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 161 EHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp GGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred hccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999987766779999998754
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.18 E-value=1e-09 Score=119.44 Aligned_cols=289 Identities=15% Similarity=0.096 Sum_probs=153.5
Q ss_pred CCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCC--------------
Q 003911 86 SNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP-------------- 150 (787)
Q Consensus 86 ~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------- 150 (787)
.+|.++++|+.+.|.. .++.+.. +|.++++|+.++|.++ ++.+...+|.++++|+.+.+..+-
T Consensus 65 ~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCS
T ss_pred HHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccc
Confidence 3455555555555542 2443333 4555555555555433 444555555555555544443221
Q ss_pred -------CCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeecc
Q 003911 151 -------FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNG 222 (787)
Q Consensus 151 -------l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~ 222 (787)
+.. .-...|.++++|+.+.+.++. .......|. .+.+|+.+++..| ++......|.+ ..|+.+.+..
T Consensus 143 ~~~~~~~~~~-i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~--~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 143 EITIPEGVTV-IGDEAFATCESLEYVSLPDSM-ETLHNGLFS--GCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp EEECCTTCCE-ECTTTTTTCTTCCEEECCTTC-CEECTTTTT--TCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred ccccCccccc-cchhhhcccCCCcEEecCCcc-ceecccccc--CCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 110 113457777888888886553 334445554 6777888877665 44333344433 2333333221
Q ss_pred CCCCCcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccccc
Q 003911 223 QNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (787)
Q Consensus 223 ~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 302 (787)
.. ....+......+|+.+.+..+.-.-....+.++..|+.+.+..+..+ .....|..+..|+.+.+..+.+..
T Consensus 218 ~~-----~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~- 290 (394)
T 4fs7_A 218 SL-----YYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE- 290 (394)
T ss_dssp TC-----CEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT-
T ss_pred Cc-----eEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc-
Confidence 10 00111223456677777754432211224667777888887777655 566677777777777776654321
Q ss_pred CCCCCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcc
Q 003911 303 VPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNL 382 (787)
Q Consensus 303 ~p~~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l 382 (787)
..+..+.+|+.+.+.++. ..+. ...+....+|+.++|..+ +
T Consensus 291 -~~F~~~~~L~~i~l~~~i-~~I~------------------------------------~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 291 -KTFYGCSSLTEVKLLDSV-KFIG------------------------------------EEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp -TTTTTCTTCCEEEECTTC-CEEC------------------------------------TTTTTTCTTCCEECCCTT-C
T ss_pred -cccccccccccccccccc-ceec------------------------------------hhhhcCCCCCCEEEeCCc-c
Confidence 113333333333332221 0000 011223346777777643 6
Q ss_pred cccCchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCC
Q 003911 383 TGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 428 (787)
Q Consensus 383 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N 428 (787)
+..-...|.++++|+.++|..| ++..-...|.++.+|+.+++..|
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 6555667888888888888776 66455667888888888888654
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.04 E-value=5.5e-10 Score=120.03 Aligned_cols=144 Identities=15% Similarity=0.226 Sum_probs=107.8
Q ss_pred ccceeccccceEEEEEEEeCCcEEEEEEee--cccccchhHHHHHHHHHHHHhcC--CCccceEEeEEEeC---CeeEEE
Q 003911 597 EENILGRGGFGTVYKGELHDGTKIAVKRME--AGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDG---NEKLLV 669 (787)
Q Consensus 597 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv 669 (787)
..+.++.|.++.||+++.. +..+++|+.. .... ......+.+|.++++.+. +..+++++.++.+. +..|+|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4577999999999998875 4678888775 3211 123457889999999996 45688899888776 458999
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA--------------------------------- 716 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------------------- 716 (787)
|||++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 120 MEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999998774311 234677888899999999999999731
Q ss_pred ----------------------CCCeEEcCCCCCCEEECCCCc--EEEeecccceec
Q 003911 717 ----------------------HQSFIHRDLKPSNILLGDDMR--AKVADFGLVRLA 749 (787)
Q Consensus 717 ----------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DFG~a~~~ 749 (787)
...++|+|++|.||+++.++. +.|+||+.+..-
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997653 689999998753
No 406
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.04 E-value=5.2e-09 Score=113.85 Aligned_cols=272 Identities=12% Similarity=0.027 Sum_probs=161.3
Q ss_pred CCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCce-------
Q 003911 104 ISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSAN------- 175 (787)
Q Consensus 104 l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n~------- 175 (787)
++.+.. +|.++++|+.+.|.. .++.+...+|.++++|+.++|.+| ++. .-...|.++.+|+.+.+..+-
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~-I~~~aF~~c~~L~~i~~p~~l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKM-IGRCTFSGCYALKSILLPLMLKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCE-ECTTTTTTCTTCCCCCCCTTCCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceE-ccchhhcccccchhhcccCceeeeccee
Confidence 343334 799999999999975 599999999999999999999866 542 224567778888777665431
Q ss_pred --------------ecccCCCCCCCCCCCCCcEEeccccccccCCCcCccc-ccccceeeccCCCCCcCCCCccccccCc
Q 003911 176 --------------ITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGNAKLGGGIDVIQNMT 240 (787)
Q Consensus 176 --------------l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~l~~L~~~~~~~~~~~~~~~~~~~~l~ 240 (787)
+.......|. .+++|+.+.+..+. .......|.+ .+|+.+.+... .......++.+++
T Consensus 136 F~~~~~~~~~~~~~~~~i~~~aF~--~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~----~~~I~~~~F~~~~ 208 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTVIGDEAFA--TCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN----LKIIRDYCFAECI 208 (394)
T ss_dssp TTTCCCSEEECCTTCCEECTTTTT--TCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT----CCEECTTTTTTCT
T ss_pred eecccccccccCccccccchhhhc--ccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC----ceEeCchhhcccc
Confidence 1111123343 77899999997654 3244444543 33444443211 1111123455666
Q ss_pred cCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCCCCceeeeccccCCC
Q 003911 241 SLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNN 320 (787)
Q Consensus 241 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~l~~~~n 320 (787)
.|+.+.+..+...- .........|+.+.+..+. +......+..+..|+.+.+..+..+-....+..+..+.......+
T Consensus 209 ~L~~i~~~~~~~~i-~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 209 LLENMEFPNSLYYL-GDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp TCCBCCCCTTCCEE-CTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSS
T ss_pred ccceeecCCCceEe-ehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcceeeccccccccccceeccCce
Confidence 66666665554331 1223334566666665433 324455666777777777766644322222333333222222111
Q ss_pred ccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhcCCCCCCEEe
Q 003911 321 FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLI 400 (787)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 400 (787)
.+. ...+....+|+.+.+..+ ++..-...|.++++|+.++
T Consensus 287 ~i~---------------------------------------~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~ 326 (394)
T 4fs7_A 287 IVP---------------------------------------EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSID 326 (394)
T ss_dssp EEC---------------------------------------TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEEC
T ss_pred eec---------------------------------------cccccccccccccccccc-cceechhhhcCCCCCCEEE
Confidence 100 011223357788888654 6655667788899999999
Q ss_pred cccccccccCCccCcCCCCCCeeeccCC
Q 003911 401 LADNNLSGMIPEGLSVLGALKELDVSNN 428 (787)
Q Consensus 401 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N 428 (787)
|.++ ++..-...|.++.+|+.+++..|
T Consensus 327 lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 327 LPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred eCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 9754 66445678888999999988766
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.97 E-value=3.3e-08 Score=107.53 Aligned_cols=36 Identities=14% Similarity=0.287 Sum_probs=23.9
Q ss_pred CCCCCCCCEEecCCCcccccCCccccCCCCCCEEEcc
Q 003911 259 FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMT 295 (787)
Q Consensus 259 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 295 (787)
|.++..|+.+.+.++..+ .....|.++++|+.+.+.
T Consensus 261 F~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~ 296 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS 296 (394)
T ss_dssp TTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC
T ss_pred eeecccccEEecccccce-ecCcccccccccccccCC
Confidence 666677777777665544 555667777777777764
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=9.3e-11 Score=125.02 Aligned_cols=102 Identities=16% Similarity=0.215 Sum_probs=59.1
Q ss_pred CCCEEEEEeCCCCccc-c-------CCCCCCCCCCCcEEEeecCCCCC---------CCC-CCCCCCCCcEEEcccccCC
Q 003911 67 DKRITRIQIGHQNLQG-T-------LPSNLQNLTKLERLELQWNSISG---------PLP-SLNGLASLEVVMLSNNQFT 128 (787)
Q Consensus 67 ~~~v~~L~l~~~~l~~-~-------~~~~~~~l~~L~~L~L~~N~l~~---------~~~-~~~~l~~L~~L~L~~N~l~ 128 (787)
..+|+.|.+...+..| . +.+++..+++|+.|.+..+.... .+. .+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3578888888666553 2 23446677899999887654321 111 2455677777777776311
Q ss_pred cCCCccccCCCCCcEEEccCCCCCCCCCChhhh--cCCCCCEEecc
Q 003911 129 SVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLR--NASGLQNFSAN 172 (787)
Q Consensus 129 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~--~l~~L~~L~l~ 172 (787)
.+++ +. +++|++|+|..+.+.. .....+. .+++|+.|+|+
T Consensus 186 ~l~~--~~-~~~L~~L~L~~~~l~~-~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 186 SIGK--KP-RPNLKSLEIISGGLPD-SVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp BCCS--CB-CTTCSEEEEECSBCCH-HHHHHHHHSBCTTCCEEEEE
T ss_pred eecc--cc-CCCCcEEEEecCCCCh-HHHHHHHHccCCCCcEEEEe
Confidence 2222 32 6777777777766542 1112232 46666666664
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.87 E-value=1.7e-07 Score=101.83 Aligned_cols=294 Identities=14% Similarity=0.168 Sum_probs=170.7
Q ss_pred CCCCCCC-CCcEEEeecCCCCCCCC-CCCCCCCCcEEEccccc---CCcCCCccccCCCCCcEEEccCCCCCCCCCChhh
Q 003911 86 SNLQNLT-KLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ---FTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSL 160 (787)
Q Consensus 86 ~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~ 160 (787)
.+|.+.. .|+.+.+..+ ++.+-. +|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++. .-...|
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~-I~~~aF 133 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE-IDSEAF 133 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE-ECTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce-ehhhhh
Confidence 4566663 5777777643 555444 67788888888887764 66677777888888877777655 331 223556
Q ss_pred hcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCc
Q 003911 161 RNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMT 240 (787)
Q Consensus 161 ~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~ 240 (787)
..+.+|+.+.+..+ ++......|. ....|+.+.+..+ ++......|.+..|+.+.+... .......++.++.
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~--~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~----~~~i~~~af~~c~ 205 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFS--YCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAK----VTRIGTNAFSECF 205 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTT--TCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTT----CCEECTTTTTTCT
T ss_pred hhhcccccccccce-eeeeccccee--cccccccccccce-eeEeccccccccceeEEEECCc----ccccccchhhhcc
Confidence 77777887777543 3334444554 6677777777654 4434455555555665555321 1111223455667
Q ss_pred cCceEeccccccccCCC--------------CCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCCC
Q 003911 241 SLKEIWLHSNAFSGPLP--------------DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (787)
Q Consensus 241 ~L~~L~L~~N~l~~~~~--------------~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 306 (787)
+|+......+....... .+.....+..+.+.+ .++.....+|.++.+|+.+.+.++..+-....+
T Consensus 206 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF 284 (394)
T 4gt6_A 206 ALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVSIGTGAF 284 (394)
T ss_dssp TCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCEECTTTT
T ss_pred ccceecccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccceecCccc
Confidence 77776665554432111 122233455555543 344355667888888888888766543222234
Q ss_pred CCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccC
Q 003911 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (787)
Q Consensus 307 ~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~ 386 (787)
..+..|+.+.+.++. ..++ ...+....+|+.++|..+ ++..-
T Consensus 285 ~~c~~L~~i~l~~~i-~~I~------------------------------------~~aF~~c~~L~~i~lp~~-v~~I~ 326 (394)
T 4gt6_A 285 MNCPALQDIEFSSRI-TELP------------------------------------ESVFAGCISLKSIDIPEG-ITQIL 326 (394)
T ss_dssp TTCTTCCEEECCTTC-CEEC------------------------------------TTTTTTCTTCCEEECCTT-CCEEC
T ss_pred ccccccccccCCCcc-cccC------------------------------------ceeecCCCCcCEEEeCCc-ccEeh
Confidence 444444444433221 1111 112223347777777653 55455
Q ss_pred chhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCCcc
Q 003911 387 SPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQL 430 (787)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l 430 (787)
...|.++++|+.+.|..+ ++..-...|.++++|+.+++.+|..
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 667888888888888654 5534456788888888888887754
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=5e-10 Score=119.33 Aligned_cols=57 Identities=23% Similarity=0.281 Sum_probs=28.9
Q ss_pred ceEEEEccCCccccc----CchhhcCCCCCCEEecccccccccCCccCcC-CCCCCeeeccCCc
Q 003911 371 NITVINFQKMNLTGT----ISPEFASFKSLQRLILADNNLSGMIPEGLSV-LGALKELDVSNNQ 429 (787)
Q Consensus 371 ~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~-l~~L~~L~Ls~N~ 429 (787)
+|+.|+|+.|.+.+. ++..+..+++|+.|+|++|.|+...-..+.. + ...+|+++|+
T Consensus 280 ~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 280 QLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp GCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 455555555555442 2233345567777777777665432222222 1 2446666665
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.71 E-value=1.3e-10 Score=117.39 Aligned_cols=23 Identities=17% Similarity=0.037 Sum_probs=16.0
Q ss_pred CCCCcccEEEcCC-CCEEEEEeCC
Q 003911 55 DPCKWNHVVCIED-KRITRIQIGH 77 (787)
Q Consensus 55 ~~C~w~gv~C~~~-~~v~~L~l~~ 77 (787)
..|+|.|+.|+.+ .+|+.+-..+
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHHhcCcEEECCCCCEEEEEEecC
Confidence 3589999999865 3666555544
No 412
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.71 E-value=7.2e-08 Score=101.50 Aligned_cols=137 Identities=16% Similarity=0.267 Sum_probs=102.6
Q ss_pred CCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCC----CccceEEeEEEeCCeeEEE
Q 003911 594 NFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH----RHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 594 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv 669 (787)
.+...+.++.|....||++ +..+++|+... ......+.+|.++++.+.+ ..+++++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4556788999999999998 67788887643 2224568999999999966 234556555 567899
Q ss_pred EEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCC--------------------------------
Q 003911 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAH-------------------------------- 717 (787)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-------------------------------- 717 (787)
|||++|.++.+... ..++..+...++.++++.+..||+...
T Consensus 106 me~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 106 MKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 99999998864321 235666677788888888888885321
Q ss_pred ----------------------------CCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 718 ----------------------------QSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 718 ----------------------------~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
..++|+|++|.||+++++..+.|+||+.+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998666799999998754
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.62 E-value=9.3e-08 Score=99.88 Aligned_cols=137 Identities=19% Similarity=0.273 Sum_probs=100.4
Q ss_pred cceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhc-CCCc--cceEEeEEEeCC---eeEEEEE
Q 003911 598 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRH--LVALLGHCLDGN---EKLLVFE 671 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~~~~~~~~~~---~~~lv~e 671 (787)
.+.++.|....||++. ..+++|+... ......+.+|.++++.+ .+.. +.+++......+ ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999863 5688898643 23457899999999988 3433 445555443333 3489999
Q ss_pred ecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 003911 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA----------------------------------- 716 (787)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~----------------------------------- 716 (787)
+++|.++.+... ..++.+++..++.+++..++.||+..
T Consensus 97 ~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 97 KIKGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CCCCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred ccCCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999988865432 24667777888888888888888521
Q ss_pred --------------------CCCeEEcCCCCCCEEECC--CCcEEEeecccceec
Q 003911 717 --------------------HQSFIHRDLKPSNILLGD--DMRAKVADFGLVRLA 749 (787)
Q Consensus 717 --------------------~~~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~~~ 749 (787)
...++|+|++|.||++++ ...+.|+||+.+...
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 135899999999999998 456789999998764
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.57 E-value=4e-07 Score=93.28 Aligned_cols=136 Identities=16% Similarity=0.154 Sum_probs=99.6
Q ss_pred eeccccce-EEEEEEEe-CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEeCCeeEEEEEecCCC
Q 003911 600 ILGRGGFG-TVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQG 676 (787)
Q Consensus 600 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g 676 (787)
.+..|..+ .||+.... ++..+++|+-.. ....++.+|.+.++.+. +--+.++++++.+.+..++|||+++|.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45556555 69988755 467799998654 23467889999999884 444778999999999999999999998
Q ss_pred CHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 003911 677 TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA---------------------------------------- 716 (787)
Q Consensus 677 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---------------------------------------- 716 (787)
++.+.... .......++.+++..|..||+..
T Consensus 106 ~~~~~~~~---------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 106 TAFQVLEE---------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp EHHHHHHH---------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred cccccccC---------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 88765422 11223456667777777777421
Q ss_pred ---------------CCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 717 ---------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 717 ---------------~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
...++|+|+.+.||++++++.+-|+||+.+...
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 113899999999999998777789999998754
No 415
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.57 E-value=3.8e-06 Score=90.52 Aligned_cols=296 Identities=11% Similarity=0.068 Sum_probs=145.0
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEc
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (787)
.+++.+.+.. +++..-..+|.++++|+.++|..+ ++.+.. +|.+. +|+.+.+.. +++.+...+|.+. +|+.+++
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~-~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGT-DLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTC-CCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccceeccC-CcccccC
Confidence 3566666653 455344456777888888888643 554444 57665 577776654 4667777777664 6788877
Q ss_pred cCCCCCCCCCChhhhcCCCCCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCC
Q 003911 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGN 226 (787)
Q Consensus 147 ~~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~ 226 (787)
..+-. .+......-.+|+.+.+..+ ++......|. ...+|+.+.+..+.........+.....
T Consensus 121 p~~~~---~i~~~~F~~~~l~~~~~~~~-v~~i~~~~f~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------- 183 (379)
T 4h09_A 121 PGATT---EIGNYIFYNSSVKRIVIPKS-VTTIKDGIGY--KAENLEKIEVSSNNKNYVAENYVLYNKN----------- 183 (379)
T ss_dssp CTTCC---EECTTTTTTCCCCEEEECTT-CCEECSCTTT--TCTTCCEEEECTTCSSEEEETTEEEETT-----------
T ss_pred CCccc---cccccccccceeeeeeccce-eeccccchhc--ccccccccccccccceeecccceecccc-----------
Confidence 66532 23333222335555555433 3333334443 5666776666554432111110000000
Q ss_pred CcCCCCccccccCccCceEeccccccccCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCCC-
Q 003911 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE- 305 (787)
Q Consensus 227 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~- 305 (787)
......+....++..+.+..+.-.-....+....+|+.+.+..+ ++......+.++..|+.+.+..+ ++.....
T Consensus 184 ---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~a 258 (379)
T 4h09_A 184 ---KTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFL 258 (379)
T ss_dssp ---SSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTT
T ss_pred ---cceeccccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccc
Confidence 00001122233333333332222212222344444444444433 22233344444455555544433 2211111
Q ss_pred CCCceeeeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCccccc
Q 003911 306 FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT 385 (787)
Q Consensus 306 ~~~~~~L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~ 385 (787)
+..+..|..+.+..+. ..+ ....+....+|+.+++.++.++..
T Consensus 259 F~~~~~l~~i~l~~~i-~~i------------------------------------~~~aF~~c~~L~~i~l~~~~i~~I 301 (379)
T 4h09_A 259 LQNCTALKTLNFYAKV-KTV------------------------------------PYLLCSGCSNLTKVVMDNSAIETL 301 (379)
T ss_dssp TTTCTTCCEEEECCCC-SEE------------------------------------CTTTTTTCTTCCEEEECCTTCCEE
T ss_pred cceeehhccccccccc-eec------------------------------------ccccccccccccccccccccccee
Confidence 1112222211111110 000 001222334788888888888766
Q ss_pred CchhhcCCCCCCEEecccccccccCCccCcCCCCCCeeeccCC
Q 003911 386 ISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 428 (787)
Q Consensus 386 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N 428 (787)
-...|.++.+|+.++|..+ ++-.-...|.++.+|+.+.+..+
T Consensus 302 ~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 302 EPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred hhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 6777888888988888754 65344567888888888877543
No 416
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.57 E-value=5.8e-07 Score=93.81 Aligned_cols=137 Identities=17% Similarity=0.180 Sum_probs=95.8
Q ss_pred cceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCC---ccceEEeEEE-eCCeeEEEEEec
Q 003911 598 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR---HLVALLGHCL-DGNEKLLVFEYM 673 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~ 673 (787)
.+.++.|....||+. +..+++|+... ......+.+|.++++.+.+. .+.+++.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456888998999988 56788887432 23456899999999999642 3667777775 445678999999
Q ss_pred CCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 003911 674 PQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL-------------------------------------- 715 (787)
Q Consensus 674 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------------------------------------- 715 (787)
+|..+.+... ..++..+...++.++++.|..||+.
T Consensus 96 ~G~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 96 QGQILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CSEECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred CCeECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9988865321 1233444444555555555555532
Q ss_pred -------------------CCCCeEEcCCCCCCEEECC---CCc-EEEeecccceec
Q 003911 716 -------------------AHQSFIHRDLKPSNILLGD---DMR-AKVADFGLVRLA 749 (787)
Q Consensus 716 -------------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~DFG~a~~~ 749 (787)
....++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1246799999999999987 455 489999988754
No 417
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.50 E-value=6.8e-07 Score=92.13 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=61.8
Q ss_pred CcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCC---ccceEEeEEEeCCeeEEEEE
Q 003911 595 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR---HLVALLGHCLDGNEKLLVFE 671 (787)
Q Consensus 595 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e 671 (787)
....+.|+.|.++.||+++..+|+.++||+..... ......+..|++.++.+++. .+++++++. ..++|||
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 34467899999999999998889999999865421 22346789999999999765 577888763 3689999
Q ss_pred ecCCCCH
Q 003911 672 YMPQGTL 678 (787)
Q Consensus 672 ~~~~gsL 678 (787)
|++++++
T Consensus 91 ~l~g~~~ 97 (288)
T 3d1u_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9999875
No 418
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.43 E-value=1.8e-06 Score=92.19 Aligned_cols=147 Identities=13% Similarity=0.135 Sum_probs=92.6
Q ss_pred CcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCc--cceEEeEEEeC-CeeEEEEE
Q 003911 595 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALLGHCLDG-NEKLLVFE 671 (787)
Q Consensus 595 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e 671 (787)
....+.++.|....+|+.+. ++..+++|+.... ..+..|..+++.+.... +.++++++... +..|+|||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 44567789999999999875 5888999987431 25889999999986533 56777777764 56899999
Q ss_pred ecCCCCHHH---------------HHHhhhhcCCC-----------C----CCHHHH---------------------HH
Q 003911 672 YMPQGTLSR---------------HIFNWAEEGLK-----------P----LEWNRR---------------------LT 700 (787)
Q Consensus 672 ~~~~gsL~~---------------~l~~~~~~~~~-----------~----l~~~~~---------------------~~ 700 (787)
|++|.++.+ .+......... . -.|... ..
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 999865531 11110000000 0 001111 01
Q ss_pred HHHHHHHHHHHHHhC-CCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 701 IALDVARGVEYLHGL-AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 701 i~~qi~~~L~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
....+...++++... ....++|+|++|.||++++++.+.|+||+.+..-
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 111122222233221 1256899999999999987777889999998764
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.28 E-value=7.3e-08 Score=92.50 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=42.5
Q ss_pred cCCCCCCCCCCCcEEEeecC-CCCCC-----CCCCCCCCCCcEEEcccccCCcCC----CccccCCCCCcEEEccCCCCC
Q 003911 83 TLPSNLQNLTKLERLELQWN-SISGP-----LPSLNGLASLEVVMLSNNQFTSVP----SDFFTGLSSLQSIEIDNNPFS 152 (787)
Q Consensus 83 ~~~~~~~~l~~L~~L~L~~N-~l~~~-----~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 152 (787)
.+...+...+.|++|+|++| .|... ...+...++|++|+|++|+|+... ...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34445666777888888887 77642 113555667777777777776421 223444556666666666665
No 420
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.26 E-value=1.5e-06 Score=92.88 Aligned_cols=82 Identities=10% Similarity=-0.013 Sum_probs=56.7
Q ss_pred ccee-ccccceEEEEEEEe-------CCcEEEEEEeecccc-cchhHHHHHHHHHHHHhcC-C--CccceEEeEEEeC--
Q 003911 598 ENIL-GRGGFGTVYKGELH-------DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVR-H--RHLVALLGHCLDG-- 663 (787)
Q Consensus 598 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~-- 663 (787)
.+.| +.|....+|+.+.. +++.+++|+...... .......+.+|.++++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4667 88989999998764 267889997654220 0001246788888888884 3 3577888887655
Q ss_pred -CeeEEEEEecCCCCHH
Q 003911 664 -NEKLLVFEYMPQGTLS 679 (787)
Q Consensus 664 -~~~~lv~e~~~~gsL~ 679 (787)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.23 E-value=7.1e-08 Score=92.57 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=45.8
Q ss_pred ccCccCceEeccccccccC-----CCCCCCCCCCCEEec--CCCccccc----CCccccCCCCCCEEEccCCccc
Q 003911 237 QNMTSLKEIWLHSNAFSGP-----LPDFSGVKQLESLSL--RDNFFTGP----VPDSLVKLESLKIVNMTNNLLQ 300 (787)
Q Consensus 237 ~~l~~L~~L~L~~N~l~~~-----~~~~~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 300 (787)
...++|++|+|++|.|... ...+...+.|++|+| ++|.|+.. +...+...+.|++|+|++|.+.
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3456777777777777652 223566678888888 78888754 3455666788999999999876
No 422
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.21 E-value=6.6e-07 Score=90.22 Aligned_cols=104 Identities=19% Similarity=0.243 Sum_probs=61.1
Q ss_pred CCCCCCCcE--EEeecCCCCCC---CC-CCCCCCCCcEEEcccccCCcCC--CccccCCCCCcEEEccCCCCCCCCCChh
Q 003911 88 LQNLTKLER--LELQWNSISGP---LP-SLNGLASLEVVMLSNNQFTSVP--SDFFTGLSSLQSIEIDNNPFSSWEIPQS 159 (787)
Q Consensus 88 ~~~l~~L~~--L~L~~N~l~~~---~~-~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~p~~ 159 (787)
|...+.|+. ++++.|+.... .+ ...++++|++|+|++|+|++++ +..+..+++|++|+|++|+|+++ ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~---~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE---RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG---GG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc---hh
Confidence 333444444 55566643221 11 1245677777777777777754 24556777777777777777752 33
Q ss_pred hhcCC--CCCEEeccCceecccCCC-------CCCCCCCCCCcEEe
Q 003911 160 LRNAS--GLQNFSANSANITGQIPS-------FFGPDEFPGLTILH 196 (787)
Q Consensus 160 ~~~l~--~L~~L~l~~n~l~~~~p~-------~~~~~~l~~L~~L~ 196 (787)
+..++ +|++|+|++|.+.+.+|. .+. .+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~--~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRE--RFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHH--HCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHH--HCcccCeEC
Confidence 34343 777777777777765552 122 577777776
No 423
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.09 E-value=0.00013 Score=78.41 Aligned_cols=265 Identities=12% Similarity=0.096 Sum_probs=151.3
Q ss_pred CCCCCCCCcEEEeecCCCCCCCC-CCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCC
Q 003911 87 NLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASG 165 (787)
Q Consensus 87 ~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~ 165 (787)
++....+|+.+.+.. .++.+.. +|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ +. .++.......+
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~--~I~~~aF~~~~ 114 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK--KFGDYVFQGTD 114 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC--EECTTTTTTCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee--EeccceeccCC
Confidence 345556777777753 3554444 6888888888888643 777777788776 5777776544 33 33333333346
Q ss_pred CCEEeccCceecccCCCCCCCCCCCCCcEEeccccccccCCCcCcccccccceeeccCCCCCcCCCCccccccCccCceE
Q 003911 166 LQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEI 245 (787)
Q Consensus 166 L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~l~~L~~L 245 (787)
|+.+.+..+ ++......|. -.+|+.+.+..+ ++.... ..+.++.+++.+
T Consensus 115 L~~i~lp~~-~~~i~~~~F~---~~~l~~~~~~~~-v~~i~~--------------------------~~f~~~~~l~~~ 163 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFY---NSSVKRIVIPKS-VTTIKD--------------------------GIGYKAENLEKI 163 (379)
T ss_dssp CSEEECCTT-CCEECTTTTT---TCCCCEEEECTT-CCEECS--------------------------CTTTTCTTCCEE
T ss_pred cccccCCCc-cccccccccc---cceeeeeeccce-eecccc--------------------------chhccccccccc
Confidence 777776544 2223233332 123444433322 111111 224456666666
Q ss_pred eccccccccC-------------CCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCcccccCC-CCCCcee
Q 003911 246 WLHSNAFSGP-------------LPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP-EFDRSVS 311 (787)
Q Consensus 246 ~L~~N~l~~~-------------~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~ 311 (787)
.+..+..... ...+.....+..+.+..+.-. .....+..+.+|+.+.+..+- +.... .+..+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~~-~~i~~~~f~~~~~ 241 (379)
T 4h09_A 164 EVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSGV-TTLGDGAFYGMKA 241 (379)
T ss_dssp EECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTTC-CEECTTTTTTCSS
T ss_pred ccccccceeecccceecccccceeccccccccccccccccceeE-Eeecccccccccceeeeccce-eEEccccccCCcc
Confidence 6655433211 112445566777776655444 566777888889988886652 22222 2344444
Q ss_pred eeccccCCCccCCCCCCCCchhhHHHHHHHHhCCChhhhcccCCCCCCCCccccccCCCceEEEEccCCcccccCchhhc
Q 003911 312 LDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFA 391 (787)
Q Consensus 312 L~~l~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~ 391 (787)
|+.+.+..+. ..+. ...+....+|+.+.+.. ++.......|.
T Consensus 242 L~~i~lp~~v-~~I~------------------------------------~~aF~~~~~l~~i~l~~-~i~~i~~~aF~ 283 (379)
T 4h09_A 242 LDEIAIPKNV-TSIG------------------------------------SFLLQNCTALKTLNFYA-KVKTVPYLLCS 283 (379)
T ss_dssp CCEEEECTTC-CEEC------------------------------------TTTTTTCTTCCEEEECC-CCSEECTTTTT
T ss_pred ceEEEcCCCc-cEeC------------------------------------ccccceeehhccccccc-cceeccccccc
Confidence 4443332221 0000 01122334677777754 35555566788
Q ss_pred CCCCCCEEecccccccccCCccCcCCCCCCeeeccCC
Q 003911 392 SFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 428 (787)
Q Consensus 392 ~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N 428 (787)
++++|+.+++.++.++..-...|.++.+|+.++|..+
T Consensus 284 ~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 284 GCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp TCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 9999999999998888555678899999999998654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.06 E-value=3.4e-05 Score=81.72 Aligned_cols=145 Identities=16% Similarity=0.194 Sum_probs=82.3
Q ss_pred cceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC--CCccceEEe------EEEeCCeeEEE
Q 003911 598 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--HRHLVALLG------HCLDGNEKLLV 669 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~------~~~~~~~~~lv 669 (787)
.+.|+.|..+.||++...+| .+++|+.... ..++..|.++++.+. .-.+++++. +....+..+++
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 34566677899999987644 5899988651 133445555555552 112333332 22346678999
Q ss_pred EEecCCCCHH-----------H---HHHhhhhcC--C-------CCCCHHHH----------------------------
Q 003911 670 FEYMPQGTLS-----------R---HIFNWAEEG--L-------KPLEWNRR---------------------------- 698 (787)
Q Consensus 670 ~e~~~~gsL~-----------~---~l~~~~~~~--~-------~~l~~~~~---------------------------- 698 (787)
|||++|..+. + .++...... . ....|...
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999986542 1 112111110 0 00122110
Q ss_pred ---HHHHHHHHHHHHHHHh----------CCCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 699 ---LTIALDVARGVEYLHG----------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 699 ---~~i~~qi~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
..+..++..++++|+. .....++|+|+++.||+++.++.+.|+||+.+..-
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g 253 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD 253 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence 1111234445666652 02478999999999999987888999999988643
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.94 E-value=2.8e-05 Score=84.33 Aligned_cols=77 Identities=12% Similarity=0.094 Sum_probs=50.9
Q ss_pred cceeccccceEEEEEEEe-CCcEEEEEEeecccc--c---chhHHHHHHHHHHHHhcCC--C-ccceEEeEEEeCCeeEE
Q 003911 598 ENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI--S---GKGLTEFKSEIAVLTKVRH--R-HLVALLGHCLDGNEKLL 668 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~---~~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~l 668 (787)
.+.+|.|.++.||+++.. +++.++||....... . ....+++..|.++++.+.. | .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999654 468899998653211 0 1123567789999988742 3 34456544 4455689
Q ss_pred EEEecCCC
Q 003911 669 VFEYMPQG 676 (787)
Q Consensus 669 v~e~~~~g 676 (787)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.86 E-value=8.6e-05 Score=76.99 Aligned_cols=141 Identities=15% Similarity=0.155 Sum_probs=93.7
Q ss_pred ccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC---CCccceEEeEEEeCCeeEEEEEec
Q 003911 597 EENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR---HRHLVALLGHCLDGNEKLLVFEYM 673 (787)
Q Consensus 597 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~ 673 (787)
..+.|+.|....+|+.+. ++..+++|+.... ....+..|.+.++.+. ...++++++++...+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 356789999999999876 4678899987542 3567899999998883 367889999988888899999999
Q ss_pred CCCCHH--------HH---HHhhhh-cCC----------------CCCCHHHHH---HHHH----------------HHH
Q 003911 674 PQGTLS--------RH---IFNWAE-EGL----------------KPLEWNRRL---TIAL----------------DVA 706 (787)
Q Consensus 674 ~~gsL~--------~~---l~~~~~-~~~----------------~~l~~~~~~---~i~~----------------qi~ 706 (787)
++..+. +. ++.... ... -.-+|.... ++.. +++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 987652 11 222111 000 012354322 1111 111
Q ss_pred HH-HHHHHh-CCCCCeEEcCCCCCCEEECCCCcEEEeecc
Q 003911 707 RG-VEYLHG-LAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (787)
Q Consensus 707 ~~-L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 744 (787)
.. ...|.. ..+..+||+|+.+.|++++.++ +.|+||.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 123321 1246899999999999999887 8999984
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.76 E-value=0.00016 Score=74.41 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=57.9
Q ss_pred CCcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-C--CccceEEeEEEeCCeeEEEE
Q 003911 594 NFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-H--RHLVALLGHCLDGNEKLLVF 670 (787)
Q Consensus 594 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~lv~ 670 (787)
...-.+.+|.|..+.||+.+..+|+.|++|+..... ......|+.|.+.|+.+. . -.+++++++. ..++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 455567899999999999999999999999865432 222346889999999884 2 2345555542 347899
Q ss_pred EecCCCCH
Q 003911 671 EYMPQGTL 678 (787)
Q Consensus 671 e~~~~gsL 678 (787)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987654
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.72 E-value=0.00019 Score=78.22 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=47.3
Q ss_pred cceeccccceEEEEEEEeCCcEEEEEEeecccc--cc-----hhHHHHHHHHHHHHh-cCCCccceEEeEEEeCCeeEEE
Q 003911 598 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVI--SG-----KGLTEFKSEIAVLTK-VRHRHLVALLGHCLDGNEKLLV 669 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~-----~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv 669 (787)
.+.+|.|....||++.. +++.++||....... .. .....++.|+..+.. .....+++++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 56789999999999964 467899995432110 11 123344444443332 2335667777665 5667999
Q ss_pred EEec-CC
Q 003911 670 FEYM-PQ 675 (787)
Q Consensus 670 ~e~~-~~ 675 (787)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 429
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.65 E-value=0.00033 Score=73.33 Aligned_cols=159 Identities=13% Similarity=0.148 Sum_probs=87.0
Q ss_pred HHHHHhhcCCCcc-----cceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCc--cceEE
Q 003911 585 IQVLRNVTNNFSE-----ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALL 657 (787)
Q Consensus 585 ~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~ 657 (787)
.+++..+...|.+ .+.|+.|....+|+....+| .+++|+.... ...+++..|.++++.+.... +++++
T Consensus 9 ~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~----~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 9 EDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR----VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp HHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred HHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC----CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 3444444444543 34567788899999987655 6889988652 12235667777777763212 33333
Q ss_pred eE------EEeCCeeEEEEEecCCCCHHH-----------H---HHhhhhc-CCC---CC---CHHHHHH----------
Q 003911 658 GH------CLDGNEKLLVFEYMPQGTLSR-----------H---IFNWAEE-GLK---PL---EWNRRLT---------- 700 (787)
Q Consensus 658 ~~------~~~~~~~~lv~e~~~~gsL~~-----------~---l~~~~~~-~~~---~l---~~~~~~~---------- 700 (787)
.. ....+..+++|+|++|..+.. . ++..... ... .. .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 223456789999998865321 1 1111100 000 00 1211100
Q ss_pred --HHHHHHHHHHHHHhC----CCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 701 --IALDVARGVEYLHGL----AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 701 --i~~qi~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
+...+...+++++.. .+.+++|+|+++.||+++++..+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234455555531 135799999999999998876568999998764
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.47 E-value=3e-05 Score=72.35 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=30.1
Q ss_pred CCCcEEEeecCCCCC-CCCCCCCCCCCcEEEcccc-cCCcCCCccccCC----CCCcEEEccCC
Q 003911 92 TKLERLELQWNSISG-PLPSLNGLASLEVVMLSNN-QFTSVPSDFFTGL----SSLQSIEIDNN 149 (787)
Q Consensus 92 ~~L~~L~L~~N~l~~-~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l----~~L~~L~L~~N 149 (787)
.+|++|||+++.|+. .+..+.++++|++|+|++| +|+.-.-..++.+ ++|++|+|+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C 124 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISC 124 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCC
Confidence 356666666666544 2224555666666666665 3544332333333 24666666655
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.42 E-value=0.00031 Score=73.92 Aligned_cols=144 Identities=15% Similarity=0.116 Sum_probs=74.9
Q ss_pred ceeccccceE-EEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-C-CccceEEeEEEeCCeeEEEEEecCC
Q 003911 599 NILGRGGFGT-VYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-H-RHLVALLGHCLDGNEKLLVFEYMPQ 675 (787)
Q Consensus 599 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~~~~~~~~~~~~~lv~e~~~~ 675 (787)
+.|+.|.... +|+....++..+++|...... ..++..|+++++.+. + -.+++++.+....+ +++||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~-----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE-----GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT-----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC-----CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 4566665554 667765446778887654321 123456677777663 2 23566776643333 789999977
Q ss_pred CCHHHHHHhhh------------------hc---CCCCCCHHHHH-------H-------------HHHHHHHHHHHHH-
Q 003911 676 GTLSRHIFNWA------------------EE---GLKPLEWNRRL-------T-------------IALDVARGVEYLH- 713 (787)
Q Consensus 676 gsL~~~l~~~~------------------~~---~~~~l~~~~~~-------~-------------i~~qi~~~L~~LH- 713 (787)
..+.+++.... .. ....++..... . ....+...++.+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 66654442110 00 01112211100 0 0011112222221
Q ss_pred --hCCCCCeEEcCCCCCCEEECCC----CcEEEeecccceec
Q 003911 714 --GLAHQSFIHRDLKPSNILLGDD----MRAKVADFGLVRLA 749 (787)
Q Consensus 714 --~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DFG~a~~~ 749 (787)
......++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1124689999999999999874 68999999988754
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.38 E-value=0.00026 Score=62.99 Aligned_cols=55 Identities=15% Similarity=0.376 Sum_probs=38.4
Q ss_pred EEEeecCCCC--CCCCCCCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEccCCCCC
Q 003911 96 RLELQWNSIS--GPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFS 152 (787)
Q Consensus 96 ~L~L~~N~l~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 152 (787)
.++.+++.++ .++..+. ++|++|+|++|+|+.++++.|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555 3332322 35778888888888888888888888888888888765
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.38 E-value=0.00087 Score=70.23 Aligned_cols=145 Identities=13% Similarity=0.049 Sum_probs=83.3
Q ss_pred ceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCC--ccceEEeE-----EEeCCeeEEEEE
Q 003911 599 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLGH-----CLDGNEKLLVFE 671 (787)
Q Consensus 599 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~-----~~~~~~~~lv~e 671 (787)
+.++ |....||++...+|+.+++|+...... ...++..|.++++.+... .+++++.. ....+..+++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 888899998776777899999864322 235677788888877421 24444443 223456688999
Q ss_pred ecCCCCHH----H-------H---HHhhhhcC----CCCCCHHHH----HH---------------HHHHHHHHHHHHHh
Q 003911 672 YMPQGTLS----R-------H---IFNWAEEG----LKPLEWNRR----LT---------------IALDVARGVEYLHG 714 (787)
Q Consensus 672 ~~~~gsL~----~-------~---l~~~~~~~----~~~l~~~~~----~~---------------i~~qi~~~L~~LH~ 714 (787)
|++|..+. + . ++...... ....++... .. +...+...++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99875432 1 1 11111100 011222111 00 11111122333321
Q ss_pred C----CCCCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 715 L----AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 715 ~----~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
. ....++|+|+++.||+++ + .+.|+||+.+..-
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 1 235689999999999998 4 8999999887643
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.36 E-value=0.0004 Score=71.87 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=76.8
Q ss_pred cceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCcc-ceEEeEEEeCCeeEEEEEec-CC
Q 003911 598 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL-VALLGHCLDGNEKLLVFEYM-PQ 675 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~ 675 (787)
.+.|+.|....+|+. ..+++|+...... ......+|.++++.+....+ .+++++ +.+.-++++||+ ++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~---~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE---EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc---ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCC
Confidence 678999999999998 5688888764211 11223567777777742222 455544 344457899999 66
Q ss_pred CCHHHH---------------HHhhhhcCC---CCCC-HHHHHHHHH--------------HHHHHHH----HHHh-CCC
Q 003911 676 GTLSRH---------------IFNWAEEGL---KPLE-WNRRLTIAL--------------DVARGVE----YLHG-LAH 717 (787)
Q Consensus 676 gsL~~~---------------l~~~~~~~~---~~l~-~~~~~~i~~--------------qi~~~L~----~LH~-~~~ 717 (787)
.++... +........ .... +.....+.. .+.+.+. .+.. ...
T Consensus 93 ~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~ 172 (301)
T 3dxq_A 93 QTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLP 172 (301)
T ss_dssp EECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCC
Confidence 544321 101000000 0011 111111110 0111111 1111 123
Q ss_pred CCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 718 QSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 718 ~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
..++|+|+.|.||+ .+++.+.++||..+..-
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 46899999999999 56667899999988754
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.34 E-value=3.8e-05 Score=71.71 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=66.2
Q ss_pred CCEEEEEeCCCCccccCCCCCCCCCCCcEEEeecCC-CCC-CCCCCCCC----CCCcEEEcccc-cCCcCCCccccCCCC
Q 003911 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNS-ISG-PLPSLNGL----ASLEVVMLSNN-QFTSVPSDFFTGLSS 140 (787)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~ 140 (787)
-+++.||++++.++..--..+..+++|++|+|+++. |+. .+..+..+ ++|++|+|++| +|+.---..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999886555668899999999999995 665 22345554 47999999998 588654456788999
Q ss_pred CcEEEccCCC
Q 003911 141 LQSIEIDNNP 150 (787)
Q Consensus 141 L~~L~L~~N~ 150 (787)
|++|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999885
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.20 E-value=0.00061 Score=74.24 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=49.8
Q ss_pred cceeccccceEEEEEEEeC--------CcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEeCCeeEE
Q 003911 598 ENILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 668 (787)
.+.|+.|-...||++...+ ++.+++|+..... ..+.+.+|..+++.+. +.-.+++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----TESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4678888899999998753 5789999874311 1145557999888884 3333667765432 38
Q ss_pred EEEecCCCCH
Q 003911 669 VFEYMPQGTL 678 (787)
Q Consensus 669 v~e~~~~gsL 678 (787)
|+||++|.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986443
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.13 E-value=0.00096 Score=71.03 Aligned_cols=144 Identities=15% Similarity=0.157 Sum_probs=84.2
Q ss_pred cceeccccceEEEEEEEe--------CCcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEeCCeeEE
Q 003911 598 ENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 668 (787)
.+.+..|-...+|++... +++.+++|+.... ......+.+|.++++.+. +.-..++++++.+ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 356777888899998764 2478999986331 123456678999998884 3334667666543 28
Q ss_pred EEEecCCCCHHH--------------HHHhhhhcC---CCCC--CHHHHHHHHHHHHH-------------------HHH
Q 003911 669 VFEYMPQGTLSR--------------HIFNWAEEG---LKPL--EWNRRLTIALDVAR-------------------GVE 710 (787)
Q Consensus 669 v~e~~~~gsL~~--------------~l~~~~~~~---~~~l--~~~~~~~i~~qi~~-------------------~L~ 710 (787)
||||++|.++.. .+...-... .+.. -+.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999999865531 111111110 1112 23455555544322 233
Q ss_pred HHH----h-CCCCCeEEcCCCCCCEEECCC----CcEEEeeccccee
Q 003911 711 YLH----G-LAHQSFIHRDLKPSNILLGDD----MRAKVADFGLVRL 748 (787)
Q Consensus 711 ~LH----~-~~~~~ivH~Dlkp~NIll~~~----~~~kl~DFG~a~~ 748 (787)
+|. . .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 332 1 123568999999999999876 7899999998864
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.00096 Score=59.21 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=47.6
Q ss_pred ceEeccccccc--cCCCCCCCCCCCCEEecCCCcccccCCccccCCCCCCEEEccCCccc
Q 003911 243 KEIWLHSNAFS--GPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQ 300 (787)
Q Consensus 243 ~~L~L~~N~l~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 300 (787)
..++.+++.++ .+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999998 6665554 67999999999999666677899999999999999875
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.99 E-value=0.0035 Score=68.55 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=48.4
Q ss_pred cceeccccceEEEEEEEeC-CcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCcc-ceEEeEEEeCCeeEEEEEecCC
Q 003911 598 ENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL-VALLGHCLDGNEKLLVFEYMPQ 675 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~ 675 (787)
.+.|+.|-...+|++...+ +..+++|+..... . ...+..+|..+++.+...++ +++++++. + .+||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--D-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--C-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--h-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4678888899999998764 4788999875421 1 11122688999999864444 56776662 2 359999987
Q ss_pred CCH
Q 003911 676 GTL 678 (787)
Q Consensus 676 gsL 678 (787)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.93 E-value=0.0012 Score=70.52 Aligned_cols=74 Identities=16% Similarity=0.138 Sum_probs=45.1
Q ss_pred cceeccccceEEEEEEEeC---------CcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCc-cceEEeEEEeCCeeE
Q 003911 598 ENILGRGGFGTVYKGELHD---------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH-LVALLGHCLDGNEKL 667 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~ 667 (787)
.+.++.|....+|++...+ +..+++|+..... ....+...|.++++.+...+ ++++++.. . -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 3567888888999998754 2688899875421 11123467888888874323 45666544 2 37
Q ss_pred EEEEecCCCCH
Q 003911 668 LVFEYMPQGTL 678 (787)
Q Consensus 668 lv~e~~~~gsL 678 (787)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.91 E-value=0.0049 Score=64.82 Aligned_cols=32 Identities=25% Similarity=0.446 Sum_probs=28.5
Q ss_pred CCeEEcCCCCCCEEECCCCcEEEeecccceec
Q 003911 718 QSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 718 ~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 749 (787)
..++|+|+.+.||++++++.+.|+||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 57999999999999998888999999887654
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.63 E-value=0.00024 Score=67.54 Aligned_cols=65 Identities=15% Similarity=0.138 Sum_probs=43.5
Q ss_pred cccCccCceEeccccccccCC-----CCCCCCCCCCEEecCCCc---ccc----cCCccccCCCCCCEEEccCCccc
Q 003911 236 IQNMTSLKEIWLHSNAFSGPL-----PDFSGVKQLESLSLRDNF---FTG----PVPDSLVKLESLKIVNMTNNLLQ 300 (787)
Q Consensus 236 ~~~l~~L~~L~L~~N~l~~~~-----~~~~~l~~L~~L~L~~N~---l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 300 (787)
+..-+.|++|+|++|.|...- ..+..-+.|+.|+|++|. +.. .+.+.+..-+.|+.|+++.|.+.
T Consensus 94 L~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 94 IETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 345567888888888886422 135556778899998653 332 24455666788999999887654
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.59 E-value=0.00036 Score=66.36 Aligned_cols=112 Identities=14% Similarity=0.213 Sum_probs=49.0
Q ss_pred CCCCCCcEEEeecC-CCCCC-----CCCCCCCCCCcEEEcccccCCcCC----CccccCCCCCcEEEccCCCCCCC---C
Q 003911 89 QNLTKLERLELQWN-SISGP-----LPSLNGLASLEVVMLSNNQFTSVP----SDFFTGLSSLQSIEIDNNPFSSW---E 155 (787)
Q Consensus 89 ~~l~~L~~L~L~~N-~l~~~-----~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~---~ 155 (787)
.+-+.|++|+|++| +|... -.++..-+.|+.|+|++|+|...- .+++..-+.|++|+|++|.|... .
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 33445555555553 44321 012333445555555555555321 22233445555555555555420 0
Q ss_pred CChhhhcCCCCCEEeccCc---eeccc----CCCCCCCCCCCCCcEEecccccc
Q 003911 156 IPQSLRNASGLQNFSANSA---NITGQ----IPSFFGPDEFPGLTILHLAFNQL 202 (787)
Q Consensus 156 ~p~~~~~l~~L~~L~l~~n---~l~~~----~p~~~~~~~l~~L~~L~L~~N~l 202 (787)
+-+.+..-+.|+.|+|++| .+... +...+. .-+.|+.|+++.|.+
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~--~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIE--ENESLLRVGISFASM 169 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHH--HCSSCCEEECCCCCH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHH--hCCCcCeEeccCCCc
Confidence 1122333344666666543 22211 111121 335667777766654
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.30 E-value=0.011 Score=63.24 Aligned_cols=147 Identities=16% Similarity=0.182 Sum_probs=84.0
Q ss_pred cceeccccceEEEEEEEeC--------CcEEEEEEeecccc------------cch----hHHHHHHHHHHHHhcC-CCc
Q 003911 598 ENILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVI------------SGK----GLTEFKSEIAVLTKVR-HRH 652 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~------------~~~----~~~~~~~E~~~l~~l~-h~n 652 (787)
.+.|..|-...+|++...+ +..|++++.-.... +.+ ..+....|.++++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3556668888999987653 36888988744211 000 0112335888888884 444
Q ss_pred cceEEeEEEeCCeeEEEEEecCCCCHHH--------------HHHhhhhcC---CCCCC--HHHHHHHHHHHH-------
Q 003911 653 LVALLGHCLDGNEKLLVFEYMPQGTLSR--------------HIFNWAEEG---LKPLE--WNRRLTIALDVA------- 706 (787)
Q Consensus 653 iv~~~~~~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~~---~~~l~--~~~~~~i~~qi~------- 706 (787)
..++++++.. .+|+||++|.+|.. .+...-... .+... +.+..++..++.
T Consensus 137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5677777642 28999999755421 111111110 11122 233333433321
Q ss_pred ---------------HHHH----HHHhC-CCCCeEEcCCCCCCEEECCC------CcEEEeeccccee
Q 003911 707 ---------------RGVE----YLHGL-AHQSFIHRDLKPSNILLGDD------MRAKVADFGLVRL 748 (787)
Q Consensus 707 ---------------~~L~----~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DFG~a~~ 748 (787)
.-+. +|... .+..++|+|+.+.||+++++ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 22221 23568999999999999876 7899999998764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.75 E-value=0.027 Score=60.64 Aligned_cols=143 Identities=13% Similarity=0.173 Sum_probs=85.2
Q ss_pred cceeccccceEEEEEEEeC--------CcEEEEEEeecccccchhHHHHHHHHHHHHhcC-CCccceEEeEEEeCCeeEE
Q 003911 598 ENILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLL 668 (787)
Q Consensus 598 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 668 (787)
.+.+..|-...+|+....+ ++.+++|+..... ....+.++|.++++.+. +.-..++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 4567778889999998753 5789999865421 11223467888888874 33345666533 2 278
Q ss_pred EEEecCCCCHHH--------------H---HHhhhh-----c---CCCCCCHHHHHHHHHHH------------------
Q 003911 669 VFEYMPQGTLSR--------------H---IFNWAE-----E---GLKPLEWNRRLTIALDV------------------ 705 (787)
Q Consensus 669 v~e~~~~gsL~~--------------~---l~~~~~-----~---~~~~l~~~~~~~i~~qi------------------ 705 (787)
||||++|..+.. . ++.... . ...+.-+.++.++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 999999865421 0 111111 0 11111244443333222
Q ss_pred -HHHHHHHHh---------------------CCCCCeEEcCCCCCCEEECCCCcEEEeeccccee
Q 003911 706 -ARGVEYLHG---------------------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (787)
Q Consensus 706 -~~~L~~LH~---------------------~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 748 (787)
...+++|.. ..+..++|+|+.+.||+ ++++.+.++||..|..
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 222333321 11346899999999999 7888999999998864
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.09 E-value=0.26 Score=52.81 Aligned_cols=30 Identities=30% Similarity=0.501 Sum_probs=25.4
Q ss_pred CeEEcCCCCCCEEE------CCCCcEEEeeccccee
Q 003911 719 SFIHRDLKPSNILL------GDDMRAKVADFGLVRL 748 (787)
Q Consensus 719 ~ivH~Dlkp~NIll------~~~~~~kl~DFG~a~~ 748 (787)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567799999998864
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.81 E-value=2 Score=41.00 Aligned_cols=86 Identities=10% Similarity=0.048 Sum_probs=63.0
Q ss_pred CCCccceEEeEEEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEEcCCCC
Q 003911 649 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE-YLHGLAHQSFIHRDLKP 727 (787)
Q Consensus 649 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~-~LH~~~~~~ivH~Dlkp 727 (787)
.||++ -..+-.+.+...+.++.-+++.=...+ ..++...+++++..|+...+ +++ .-+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i--------~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI--------RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH--------HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH--------HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeC
Confidence 57888 444556777777777765443222333 24778889999999888776 555 358889999
Q ss_pred CCEEECCCCcEEEeecccceec
Q 003911 728 SNILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 728 ~NIll~~~~~~kl~DFG~a~~~ 749 (787)
+||+++.++.+++.-.|+-..+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL 134 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB
T ss_pred ceEEEeCCCcEEEEEcCCcccC
Confidence 9999999999999998875444
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.71 E-value=0.14 Score=55.94 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=18.7
Q ss_pred cccceeccccceEEEEEEEeC-CcEEEE------EEeecccccchhHHHHHHHHHHHHhcCCCccceEEeEEEe
Q 003911 596 SEENILGRGGFGTVYKGELHD-GTKIAV------KRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (787)
Q Consensus 596 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 662 (787)
.+.+.+| ||.||+|.+.. ..+||| |..+...........+.+|..+++..+|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 3456676 99999998753 367888 7766544445555678889999999999999999887653
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.28 E-value=2 Score=40.88 Aligned_cols=87 Identities=11% Similarity=0.066 Sum_probs=63.2
Q ss_pred CCCccceEEeEEEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCC
Q 003911 649 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPS 728 (787)
Q Consensus 649 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 728 (787)
.||+.+.. .+-.+.+.+.+.++.-+. ...+- ..+..+...+++++.+|+...+++++ =+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~------~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFD------NIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGG------GGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCHH------HHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 58888876 566666666666655432 21111 12357788999999999998876664 478899999
Q ss_pred CEEECCCCcEEEeecccceec
Q 003911 729 NILLGDDMRAKVADFGLVRLA 749 (787)
Q Consensus 729 NIll~~~~~~kl~DFG~a~~~ 749 (787)
||+++.++.+++.-.|+...+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB
T ss_pred eEEEcCCCCEEEEEccCccCC
Confidence 999999999999999875444
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=70.22 E-value=1.1 Score=30.52 Aligned_cols=24 Identities=4% Similarity=0.227 Sum_probs=9.7
Q ss_pred eehhhHHHHHHHHHhhhheeeecc
Q 003911 494 FCVIGGAFVISLTGVLVFCLCKKK 517 (787)
Q Consensus 494 ~~~ig~~~~~~~~~~~~~~~~~~~ 517 (787)
..+++.+++++++++.+++++++|
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eehhHHHHHHHHHHHHHHHHhhhh
Confidence 334443434333334443444433
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=67.50 E-value=1.2 Score=30.19 Aligned_cols=24 Identities=29% Similarity=0.602 Sum_probs=9.8
Q ss_pred eehhhHHHHHHHHHhhhheeeecc
Q 003911 494 FCVIGGAFVISLTGVLVFCLCKKK 517 (787)
Q Consensus 494 ~~~ig~~~~~~~~~~~~~~~~~~~ 517 (787)
..++|.+++++++++.+++++++|
T Consensus 14 ~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 14 AGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeehHHHHHHHHHHHHHHHHhhhh
Confidence 334443434333444444444443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=49.65 E-value=20 Score=29.29 Aligned_cols=36 Identities=14% Similarity=0.346 Sum_probs=16.3
Q ss_pred CCCCCCCcEEEcccccCCcCCCccccCCCCCcEEEcc
Q 003911 111 LNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (787)
Q Consensus 111 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 147 (787)
|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+.
T Consensus 16 F~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 16 FAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp TTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred hcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 444444444444432 444444444444444444443
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=43.00 E-value=26 Score=28.64 Aligned_cols=49 Identities=10% Similarity=0.246 Sum_probs=35.8
Q ss_pred cccCCcCCCccccCCCCCcEEEccCCCCCCCCCChhhhcCCCCCEEeccCc
Q 003911 124 NNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSA 174 (787)
Q Consensus 124 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~l~~n 174 (787)
+..++.|...+|.++++|+.+.|-.+ ++. .-...|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~-Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGL-LYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSC-CCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hhe-EcHHHHhccCCccEEEEcCC
Confidence 34677888899999999999999876 332 22456777777777777554
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=42.72 E-value=1.9e+02 Score=31.99 Aligned_cols=86 Identities=15% Similarity=0.170 Sum_probs=51.1
Q ss_pred ceEEeEEEeCCeeEEEEEecCCCCHHHHHH----------hhhhcCCCC--CCHHHHHHHHHHHH--HHHHHHHhCCCCC
Q 003911 654 VALLGHCLDGNEKLLVFEYMPQGTLSRHIF----------NWAEEGLKP--LEWNRRLTIALDVA--RGVEYLHGLAHQS 719 (787)
Q Consensus 654 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~----------~~~~~~~~~--l~~~~~~~i~~qi~--~~L~~LH~~~~~~ 719 (787)
+..|.+........ ++|++++.++.+.+. ......... ..++.+..++..+| ..+.|+=.
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 34445554444444 457887655555442 211111111 22445556665544 34667654
Q ss_pred eEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 720 FIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 720 ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
| +|=.++|||++.+|++.=+|||.+-
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 2 5889999999999999999999874
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=42.12 E-value=99 Score=31.37 Aligned_cols=141 Identities=16% Similarity=0.147 Sum_probs=70.0
Q ss_pred CcccceeccccceEEEEEEEeCCcEEEEEEeecccccchhHHHHHHHHHHHHhcCCCccceEEeE---------------
Q 003911 595 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH--------------- 659 (787)
Q Consensus 595 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~--------------- 659 (787)
++.++..-.|..| ||.+.. ++..|+||-.. ....+-+-.++...-.+.-|+..-+.-.
T Consensus 71 v~~I~~s~~Gstg-vff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~ 143 (342)
T 1cja_A 71 FKGIERSEKGTEG-LFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAID 143 (342)
T ss_dssp EEEEEECCSTTSC-EEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHC
T ss_pred eeEEEeccCCCCC-eEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhh
Confidence 3344555666655 555544 58889999441 1223334444444444444442222110
Q ss_pred -------EEeCCeeEEEEEecCCCCHHHHHHhhhhcCCCCCCHHHHHHHHHHH--HHHHHHHH-hCCCCCeEE-cCCCCC
Q 003911 660 -------CLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV--ARGVEYLH-GLAHQSFIH-RDLKPS 728 (787)
Q Consensus 660 -------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi--~~~L~~LH-~~~~~~ivH-~Dlkp~ 728 (787)
.......+++|||.+|..|.+.-.....+ .+..+ .+.++ +-+++++. ...+.+.+. .--.+.
T Consensus 144 ~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~---~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~ 216 (342)
T 1cja_A 144 KSFRVITTLANQANILLMELVRGITLNKLTTTSAPE---VLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLD 216 (342)
T ss_dssp SSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHH---HSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGG
T ss_pred hhhHHHHHhhcccceehhhhcCCCccccchhhhhhh---hcCHH----HHHhhchhheehhhhcCCccCcccccCCCChh
Confidence 00122456999999876654321110000 12222 22232 22344444 322333322 124789
Q ss_pred CEEECCCC-cEEEeecccceec
Q 003911 729 NILLGDDM-RAKVADFGLVRLA 749 (787)
Q Consensus 729 NIll~~~~-~~kl~DFG~a~~~ 749 (787)
|||+++++ .+.++|-+.+..-
T Consensus 217 NIL~~~~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 217 NIMLSERGATVVPIDSKIIPLD 238 (342)
T ss_dssp GEEEESBTTCEEECSCCCCCCC
T ss_pred heEEeCCCCeEEEEcCCccccC
Confidence 99998654 4999999998754
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=41.76 E-value=5.8 Score=26.00 Aligned_cols=18 Identities=11% Similarity=0.030 Sum_probs=7.7
Q ss_pred eehhhHHHHHHHHHhhhh
Q 003911 494 FCVIGGAFVISLTGVLVF 511 (787)
Q Consensus 494 ~~~ig~~~~~~~~~~~~~ 511 (787)
.+++|.++.+++++.+.+
T Consensus 15 GiVvG~v~gv~li~~l~~ 32 (38)
T 2k1k_A 15 AVIFGLLLGAALLLGILV 32 (38)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred eeehHHHHHHHHHHHHHH
Confidence 444554443443333333
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=21.23 E-value=48 Score=37.45 Aligned_cols=45 Identities=27% Similarity=0.254 Sum_probs=32.5
Q ss_pred HHHHHHHHHHH--HHHHHHHhCCCCCeEEcCCCCCCEEECCCCcEEEeecccce
Q 003911 696 NRRLTIALDVA--RGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (787)
Q Consensus 696 ~~~~~i~~qi~--~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 747 (787)
..+..++..+| ..+.|+=. =+|-.++||||+++|++.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-------lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-------VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc-------CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 34445555544 33556643 26889999999999999999999874
Done!