BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003923
(786 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 167/311 (53%), Gaps = 28/311 (9%)
Query: 463 AYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMH 522
+YR L +LEEATNNFD +G G G++Y+G L++G VA++ + F
Sbjct: 26 SYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL-RSWISEGHAHQSLT 581
IE +S RH HLVS +G C E + + LI++Y+ NG L R S++
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDE-------RNEMILIYKYMENGNLKRHLYGSDLPTMSMS 137
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
W QR+ IG A+G+ +LHT + ++K +ILLD+N V KI+ + +++ +
Sbjct: 138 WEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFG---ISKKGTE 191
Query: 642 VGH------VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP--LKS--RKEVD 691
+G V G IDP +G+L EK D+Y FG++L E++ R ++S R+ V+
Sbjct: 192 LGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251
Query: 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLW 751
L + AV + + +VDP + ESL+ + V+CL + +RPS+ DVLW
Sbjct: 252 LAE---WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308
Query: 752 NLQFAAQVQDA 762
L++A ++Q++
Sbjct: 309 KLEYALRLQES 319
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 164/308 (53%), Gaps = 22/308 (7%)
Query: 463 AYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMH 522
+YR L +LEEATNNFD +G G G++Y+G L++G VA++ + F
Sbjct: 26 SYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL-RSWISEGHAHQSLT 581
IE +S RH HLVS +G C E + + LI++Y+ NG L R S++
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDE-------RNEMILIYKYMENGNLKRHLYGSDLPTMSMS 137
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
W QR+ IG A+G+ +LHT + ++K +ILLD+N V KI+ + + ++
Sbjct: 138 WEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 642 VGHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP--LKS--RKEVDLLK 694
G+ IDP +G+L EK D+Y FG++L E++ R ++S R+ V+L +
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
AV + + +VDP + ESL+ + V+CL + +RPS+ DVLW L+
Sbjct: 255 ---WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
Query: 755 FAAQVQDA 762
+A ++Q++
Sbjct: 312 YALRLQES 319
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 161/317 (50%), Gaps = 26/317 (8%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTR-NFMHH 523
+ FSL EL+ A++NF +G G G++Y+GRL +GT VA++ LK ++ F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 524 IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ-SLTW 582
+E+IS HR+L+ G C + + L++ Y+ NG++ S + E Q L W
Sbjct: 86 VEMISMAVHRNLLRLRGFCM-------TPTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV 642
+R A+G A+G+ +LH P + ++K +ILLD+ A + + L L + K
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY--KD 196
Query: 643 GHVIPYS----GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR------PLKSRKEVDL 692
HV G I P + GK EK D++ +G++LLE+I G+ L + +V L
Sbjct: 197 XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752
L + ++ ++ E ++VD + DE ++ +++V + C +P ERP + +V+
Sbjct: 257 L-DWVKGLLK--EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 753 LQFA--AQVQDAWHSQS 767
L+ A+ + W +
Sbjct: 314 LEGDGLAERWEEWQKEE 330
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 161/321 (50%), Gaps = 26/321 (8%)
Query: 461 LPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTR-N 519
L + FSL EL+ A++NF +G G G++Y+GRL +G VA++ LK ++
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 520 FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ- 578
F +E+IS HR+L+ G C + + L++ Y+ NG++ S + E Q
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCM-------TPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 579 SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN 638
L W +R A+G A+G+ +LH P + ++K +ILLD+ A + + L L +
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 639 AEKVGHVIPYS----GSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR------PLKSRK 688
K HV G I P + GK EK D++ +G++LLE+I G+ L +
Sbjct: 187 --KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVED 748
+V LL + ++ ++ E ++VD + DE ++ +++V + C +P ERP + +
Sbjct: 245 DVMLL-DWVKGLLK--EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSE 301
Query: 749 VLWNLQFA--AQVQDAWHSQS 767
V+ L+ A+ + W +
Sbjct: 302 VVRMLEGDGLAERWEEWQKEE 322
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 144/306 (47%), Gaps = 30/306 (9%)
Query: 464 YRTFSLEELEEATNNFDTSAF------MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS- 516
+ +FS EL+ TNNFD MGEG G +Y+G + N T + M +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 517 --TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG 574
+ F I++++K +H +LV LG F DD + L++ Y+PNG+L +S
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLG--FSSDGDD-----LCLVYVYMPNGSLLDRLSCL 124
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634
L+W R A G A GI FLH ++K +ILLD+ AKIS + L
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGL-- 179
Query: 635 LAENAEKVGHVIPYSGSIDPT-----NSARGKLEEKIDIYDFGLILLEIIVGRP-LKSRK 688
A +EK + S + T + RG++ K DIY FG++LLEII G P + +
Sbjct: 180 -ARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVED 748
E LL + + + E +D +N A S++ M V +CL + +RP ++
Sbjct: 239 EPQLLLDIKEEIEDE-EKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 749 VLWNLQ 754
V LQ
Sbjct: 297 VQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 143/306 (46%), Gaps = 30/306 (9%)
Query: 464 YRTFSLEELEEATNNFDTSAF------MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS- 516
+ +FS EL+ TNNFD MGEG G +Y+G + N T + M +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 517 --TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG 574
+ F I++++K +H +LV LG F DD + L++ Y+PNG+L +S
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLG--FSSDGDD-----LCLVYVYMPNGSLLDRLSCL 124
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634
L+W R A G A GI FLH ++K +ILLD+ AKIS + L
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGL-- 179
Query: 635 LAENAEKVGHVIPYSGSIDPT-----NSARGKLEEKIDIYDFGLILLEIIVGRP-LKSRK 688
A +EK + + T + RG++ K DIY FG++LLEII G P + +
Sbjct: 180 -ARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVED 748
E LL + + + E +D +N A S++ M V +CL + +RP ++
Sbjct: 239 EPQLLLDIKEEIEDE-EKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 749 VLWNLQ 754
V LQ
Sbjct: 297 VQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 150/305 (49%), Gaps = 28/305 (9%)
Query: 464 YRTFSLEELEEATNNFDTSAF------MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST 517
+ +FS EL+ TNNFD MGEG G +Y+G + N T VA++ L +T
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 64
Query: 518 ----RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE 573
+ F I++++K +H +LV LG F DD + L++ Y+PNG+L +S
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLG--FSSDGDD-----LCLVYVYMPNGSLLDRLSC 117
Query: 574 GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633
L+W R A G A GI FLH ++K +ILLD+ AKIS + L
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 634 LLAEN-AEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP-LKSRKE 689
+E A+ V ++ + + P + RG++ K DIY FG++LLEII G P + +E
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAP-EALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
Query: 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
LL + + + E +D +N A S++ M V +CL + +RP ++ V
Sbjct: 234 PQLLLDIKEEIEDE-EKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 750 LWNLQ 754
LQ
Sbjct: 292 QQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 139/306 (45%), Gaps = 30/306 (9%)
Query: 464 YRTFSLEELEEATNNFDTSAF------MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS- 516
+ +FS EL+ TNNFD GEG G +Y+G + N T + M +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 517 --TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG 574
+ F I++ +K +H +LV LG F DD + L++ Y PNG+L +S
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLG--FSSDGDD-----LCLVYVYXPNGSLLDRLSCL 115
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634
L+W R A G A GI FLH ++K +ILLD+ AKIS + L
Sbjct: 116 DGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGL-- 170
Query: 635 LAENAEKVGHVIPYSGSIDPT-----NSARGKLEEKIDIYDFGLILLEIIVGRP-LKSRK 688
A +EK + S + T + RG++ K DIY FG++LLEII G P + +
Sbjct: 171 -ARASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
Query: 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVED 748
E LL + + + E +D N A S++ V +CL + +RP ++
Sbjct: 230 EPQLLLDIKEEIEDE-EKTIEDYIDKKXNDAD-STSVEAXYSVASQCLHEKKNKRPDIKK 287
Query: 749 VLWNLQ 754
V LQ
Sbjct: 288 VQQLLQ 293
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 79 --YAVVSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 134 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 191
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 192 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 237
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ------- 77
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 78 -LYAVVSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 134 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTA-PEAALYGR 191
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 192 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 237
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 131/312 (41%), Gaps = 54/312 (17%)
Query: 26 EQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGN- 84
E Q LL+I+ L NP LSSW TT+ CN + L V+C ++ TQ + V N
Sbjct: 1 ELCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNR---TWLGVLC--DTDTQTYRVNNL 55
Query: 85 --------KRAPM------LP-LSFSMDSFVTTLV--------KLPDLKVLRLVSLGLWG 121
K P+ LP L+F + LV KL L L + + G
Sbjct: 56 DLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG 115
Query: 122 PLSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLP-I 180
+ +S++ +L L+ S N L+G +P D N ++G +PD GS +
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALG 239
+++ N G +P +F+ L NL + LS N G+ F Q + L N+L
Sbjct: 176 FTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
Query: 240 PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITY 299
KVG LSKN L LDL +NR G PQ L L +
Sbjct: 235 FDLGKVG-------LSKN---------------LNGLDLRNNRIYGTLPQGLTQLKFLHS 272
Query: 300 LNIADNKLTGKL 311
LN++ N L G++
Sbjct: 273 LNVSFNNLCGEI 284
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 67
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 68 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 122
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 123 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 180
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 181 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 226
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 227 PECPESLHDLMCQCWRKDPEERPTFE 252
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G L ++ +G + L Q + A +A G+ ++
Sbjct: 79 --YAVVSEEPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 134 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 191
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 192 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 237
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 69
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 70 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 124
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 125 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 182
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 183 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 228
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 229 PECPESLHDLMCQCWRKDPEERPTFE 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 79 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 134 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 191
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 192 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 237
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 79 --YAVVSEEPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 134 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 191
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 192 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 237
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 71
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 72 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVERM-- 126
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 127 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 184
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 185 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 230
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K P ERP+ E
Sbjct: 231 PECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G L ++ +G + L Q + A +A G+ ++
Sbjct: 79 --YAVVSEEPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 134 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 191
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 192 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 237
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 244
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 245 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVERM-- 299
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 300 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 357
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L E+ GR P ++L V+
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----------------DQVERGYRMP 401
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C E +++ ++ +C K P ERP+ E
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ------- 326
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 327 -LYAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVERM-- 382
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 383 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 440
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L E+ GR P ++L V+
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----------------DQVERGYRMP 484
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C E +++ ++ +C K P ERP+ E
Sbjct: 485 CPPECPESLHDLMCQCWRKEPEERPTFE 512
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 244
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 245 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVERM-- 299
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 300 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 357
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L E+ GR P ++L V+
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----------------DQVERGYRMP 401
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C E +++ ++ +C K P ERP+ E
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 123/284 (43%), Gaps = 37/284 (13%)
Query: 93 SFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLS-SLEILNMSSNFLNGAI--PX 149
+FS + + TL+K+ LKVL L G L ++ LS SL L++SSN +G I
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 385
Query: 150 XXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209
N G++P L + L L L N +GT+P S L LR L
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSS 269
L N GE+P L Y++ L+ T+IL N IP+ +S+
Sbjct: 446 LWLNMLEGEIPQ--ELMYVKTLE------------------TLILDFNDLTGEIPSGLSN 485
Query: 270 YYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329
L + LS+NR G P+ + L ++ L +++N +G + +L L ++DL++N
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 330 LLTGQLPNCLLAGS--------KNRVVLYARN------CLAAGN 359
L G +P + S + +Y +N C AGN
Sbjct: 546 LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 589
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 131/305 (42%), Gaps = 62/305 (20%)
Query: 92 LSFSMDSFVTTLVKLPDLKVLRLVSLG---LWGPLSGKISRLSSLEILNMSSNFLNGAIP 148
L S ++F T + L D L+ + + L G S IS + L++LN+SSN G IP
Sbjct: 202 LDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Query: 149 XXXXXXXXXXXXXXDENMLAGRVPDWL-GSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207
EN G +PD+L G+ L L L N F G +P F L
Sbjct: 262 PLPLKSLQYLSLA--ENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 319
Query: 208 LALSNNHFYGEVP------------------DFSG-----LTYLQ----VLDL-ENNALG 239
LALS+N+F GE+P +FSG LT L LDL NN G
Sbjct: 320 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 379
Query: 240 PQFPKV-------------------GK---------KLVTMILSKNKFRSAIPAEVSSYY 271
P P + GK +LV++ LS N IP+ + S
Sbjct: 380 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 439
Query: 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLL 331
+L+ L L N G PQ L+ + ++ L + N LTG++ LS L ++ LS+N L
Sbjct: 440 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 499
Query: 332 TGQLP 336
TG++P
Sbjct: 500 TGEIP 504
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 109/290 (37%), Gaps = 50/290 (17%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXX 161
TL +L L L L G + + LS L L + N L G IP
Sbjct: 410 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 469
Query: 162 XDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP- 220
D N L G +P L + L +SL NN G +P LENL +L LSNN F G +P
Sbjct: 470 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 529
Query: 221 DFSGLTYLQVLDLENNALGPQFP-----KVGKKLVTMILSK------------------- 256
+ L LDL N P + GK I K
Sbjct: 530 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 589
Query: 257 ------------NKFRSAIPAEVSSYY-------------QLQRLDLSSNRFVGPFPQAL 291
N+ + P ++S + LD+S N G P+ +
Sbjct: 590 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 649
Query: 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341
S+P + LN+ N ++G + D++ L +DLSSN L G++P + A
Sbjct: 650 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 55/249 (22%)
Query: 95 SMDSFVTTLVKLPDLKVLRLV-----SLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPX 149
S+ VTTL L L+ + +L G +SG + +L+SLE+L++S+N ++GA
Sbjct: 108 SLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGA--- 163
Query: 150 XXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209
N++ + D G L LA+ N +G + S NL L
Sbjct: 164 ---------------NVVGWVLSDGCGELKHLAI---SGNKISGDV--DVSRCVNLEFLD 203
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSS 269
+S+N+F +P + LQ LD+ N L F + +S+
Sbjct: 204 VSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRA---------------------IST 242
Query: 270 YYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLS--CNPELGFVDLS 327
+L+ L++SSN+FVGP P L L S+ YL++A+NK TG++ D LS C+ G +DLS
Sbjct: 243 CTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTG-LDLS 299
Query: 328 SNLLTGQLP 336
N G +P
Sbjct: 300 GNHFYGAVP 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 124/296 (41%), Gaps = 55/296 (18%)
Query: 92 LSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXX 151
LS ++ S + +L KL DLK+ + L G + ++ + +LE L + N L G IP
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNM---LEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 152 XXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNN---------------------- 189
N L G +P W+G L LA+L L NN
Sbjct: 484 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 543
Query: 190 --MFNGTLPDSF---------SYLENLRVLALSNN------HFYGEVPDFSGLTYLQV-- 230
+FNGT+P + +++ R + + N+ H G + +F G+ Q+
Sbjct: 544 TNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR 603
Query: 231 ------LDLENNALG----PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
++ + G P F G ++ + +S N IP E+ S L L+L
Sbjct: 604 LSTRNPCNITSRVYGGHTSPTFDNNGS-MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH 662
Query: 281 NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336
N G P + L + L+++ NKL G++ +S L +DLS+N L+G +P
Sbjct: 663 NDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 132 SLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMF 191
S+ L+MS N L+G IP N ++G +PD +G L L +L L +N
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 689
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
+G +P + S L L + LSNN+ G +P+
Sbjct: 690 DGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDE 164
+L +L +L+L + G + ++ SL L++++N NG IP
Sbjct: 509 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA---- 564
Query: 165 NMLAGRVPDWL------------GSL--------PILAVLSLRN------NMFNGTLPDS 198
N +AG+ ++ G+L L LS RN ++ G +
Sbjct: 565 NFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 624
Query: 199 FSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFP-KVG--KKLVTMIL 254
F ++ L +S N G +P + + YL +L+L +N + P +VG + L + L
Sbjct: 625 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 684
Query: 255 SKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA--LLSLPSITYLN 301
S NK IP +S+ L +DLS+N GP P+ + P +LN
Sbjct: 685 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLN 733
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLENNAL-GP--QFPKVGKKLVTMILSKNKFRSAIPAE 266
LSN+H G V F L LDL N+L GP +G L+ + P +
Sbjct: 81 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGK 140
Query: 267 VSSYYQ---LQRLDLSSNRFVGPFPQALL---SLPSITYLNIADNKLTGKLFDDLSCNPE 320
VS + L+ LDLS+N G + + +L I+ NK++G + D+S
Sbjct: 141 VSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVN 198
Query: 321 LGFVDLSSNLLTGQLP 336
L F+D+SSN + +P
Sbjct: 199 LEFLDVSSNNFSTGIP 214
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ K+RH LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQL------ 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 79 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 134 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 191
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 192 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 237
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 244
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 245 --YAVVSEEPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVER--- 298
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 357
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L E+ GR P ++L V+
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----------------DQVERGYRMP 401
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C E +++ ++ +C K P ERP+ E
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 79 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERM-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 134 -NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 191
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 192 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 237
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K+P ERP+ E
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNM-SPEAFLQEAQVMKKLRHEKLVQL------ 245
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 246 --YAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVER--- 299
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTA-PEAALYGR 358
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L E+ GR P ++L V+
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----------------DQVERGYRMP 402
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C E +++ ++ +C K+P ERP+ E
Sbjct: 403 CPPECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 123/284 (43%), Gaps = 37/284 (13%)
Query: 93 SFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLS-SLEILNMSSNFLNGAI--PX 149
+FS + + TL+K+ LKVL L G L ++ LS SL L++SSN +G I
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388
Query: 150 XXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209
N G++P L + L L L N +GT+P S L LR L
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSS 269
L N GE+P L Y++ L+ T+IL N IP+ +S+
Sbjct: 449 LWLNMLEGEIPQ--ELMYVKTLE------------------TLILDFNDLTGEIPSGLSN 488
Query: 270 YYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329
L + LS+NR G P+ + L ++ L +++N +G + +L L ++DL++N
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 330 LLTGQLPNCLLAGS--------KNRVVLYARN------CLAAGN 359
L G +P + S + +Y +N C AGN
Sbjct: 549 LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 131/305 (42%), Gaps = 62/305 (20%)
Query: 92 LSFSMDSFVTTLVKLPDLKVLRLVSLG---LWGPLSGKISRLSSLEILNMSSNFLNGAIP 148
L S ++F T + L D L+ + + L G S IS + L++LN+SSN G IP
Sbjct: 205 LDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Query: 149 XXXXXXXXXXXXXXDENMLAGRVPDWL-GSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207
EN G +PD+L G+ L L L N F G +P F L
Sbjct: 265 PLPLKSLQYLSLA--ENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 322
Query: 208 LALSNNHFYGEVP------------------DFSG-----LTYLQ----VLDL-ENNALG 239
LALS+N+F GE+P +FSG LT L LDL NN G
Sbjct: 323 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382
Query: 240 PQFPKV-------------------GK---------KLVTMILSKNKFRSAIPAEVSSYY 271
P P + GK +LV++ LS N IP+ + S
Sbjct: 383 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 442
Query: 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLL 331
+L+ L L N G PQ L+ + ++ L + N LTG++ LS L ++ LS+N L
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 502
Query: 332 TGQLP 336
TG++P
Sbjct: 503 TGEIP 507
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 109/290 (37%), Gaps = 50/290 (17%)
Query: 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXX 161
TL +L L L L G + + LS L L + N L G IP
Sbjct: 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472
Query: 162 XDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP- 220
D N L G +P L + L +SL NN G +P LENL +L LSNN F G +P
Sbjct: 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532
Query: 221 DFSGLTYLQVLDLENNALGPQFP-----KVGKKLVTMILSK------------------- 256
+ L LDL N P + GK I K
Sbjct: 533 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592
Query: 257 ------------NKFRSAIPAEVSSYY-------------QLQRLDLSSNRFVGPFPQAL 291
N+ + P ++S + LD+S N G P+ +
Sbjct: 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652
Query: 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341
S+P + LN+ N ++G + D++ L +DLSSN L G++P + A
Sbjct: 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 55/249 (22%)
Query: 95 SMDSFVTTLVKLPDLKVLRLV-----SLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPX 149
S+ VTTL L L+ + +L G +SG + +L+SLE+L++S+N ++GA
Sbjct: 111 SLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGA--- 166
Query: 150 XXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209
N++ + D G L LA+ N +G + S NL L
Sbjct: 167 ---------------NVVGWVLSDGCGELKHLAI---SGNKISGDV--DVSRCVNLEFLD 206
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSS 269
+S+N+F +P + LQ LD+ N L F + +S+
Sbjct: 207 VSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRA---------------------IST 245
Query: 270 YYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLS--CNPELGFVDLS 327
+L+ L++SSN+FVGP P L L S+ YL++A+NK TG++ D LS C+ G +DLS
Sbjct: 246 CTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTG-LDLS 302
Query: 328 SNLLTGQLP 336
N G +P
Sbjct: 303 GNHFYGAVP 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 124/296 (41%), Gaps = 55/296 (18%)
Query: 92 LSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXX 151
LS ++ S + +L KL DLK+ + L G + ++ + +LE L + N L G IP
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNM---LEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 152 XXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNN---------------------- 189
N L G +P W+G L LA+L L NN
Sbjct: 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546
Query: 190 --MFNGTLPDSF---------SYLENLRVLALSNN------HFYGEVPDFSGLTYLQV-- 230
+FNGT+P + +++ R + + N+ H G + +F G+ Q+
Sbjct: 547 TNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR 606
Query: 231 ------LDLENNALG----PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSS 280
++ + G P F G ++ + +S N IP E+ S L L+L
Sbjct: 607 LSTRNPCNITSRVYGGHTSPTFDNNGS-MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH 665
Query: 281 NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336
N G P + L + L+++ NKL G++ +S L +DLS+N L+G +P
Sbjct: 666 NDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 132 SLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMF 191
S+ L+MS N L+G IP N ++G +PD +G L L +L L +N
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692
Query: 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPD 221
+G +P + S L L + LSNN+ G +P+
Sbjct: 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDE 164
+L +L +L+L + G + ++ SL L++++N NG IP
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA---- 567
Query: 165 NMLAGRVPDWL------------GSL--------PILAVLSLRN------NMFNGTLPDS 198
N +AG+ ++ G+L L LS RN ++ G +
Sbjct: 568 NFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627
Query: 199 FSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFP-KVG--KKLVTMIL 254
F ++ L +S N G +P + + YL +L+L +N + P +VG + L + L
Sbjct: 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 687
Query: 255 SKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA--LLSLPSITYLN 301
S NK IP +S+ L +DLS+N GP P+ + P +LN
Sbjct: 688 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLN 736
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 210 LSNNHFYGEVPDFSGLTYLQVLDLENNAL-GP--QFPKVGKKLVTMILSKNKFRSAIPAE 266
LSN+H G V F L LDL N+L GP +G L+ + P +
Sbjct: 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGK 143
Query: 267 VSSYYQ---LQRLDLSSNRFVGPFPQALL---SLPSITYLNIADNKLTGKLFDDLSCNPE 320
VS + L+ LDLS+N G + + +L I+ NK++G + D+S
Sbjct: 144 VSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVN 201
Query: 321 LGFVDLSSNLLTGQLP 336
L F+D+SSN + +P
Sbjct: 202 LEFLDVSSNNFSTGIP 217
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 75
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + + +A G+ ++
Sbjct: 76 --YAVVSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVERM-- 130
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 131 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTA-PEAALYGR 188
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 189 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 234
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K P ERP+ E
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL------ 75
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G + L Q + + +A G+ ++
Sbjct: 76 --YAVVSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVERM-- 130
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 131 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGR 188
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 189 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 234
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K P ERP+ E
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G T VAI+ LK S F+ +++ KLRH LV
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ------- 67
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I ++ EY+ G+L ++ +G + L Q + A +A G+ ++
Sbjct: 68 -LYAVVSEEPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVERM-- 123
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ +NLV K++ + L L E+ E + G P + P + G+
Sbjct: 124 -NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTA-PEAALYGR 181
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E+ K R + N+ V+ E R C
Sbjct: 182 FTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------PCP 227
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
E +++ ++ +C K P ERP+ E
Sbjct: 228 PECPESLHDLMCQCWRKEPEERPTFE 253
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 31/266 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VAI+ LK S +F+ +++ KL+H LV
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQ------- 68
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ S I+++ EY+ G+L ++ +G ++L + A VA G+ ++
Sbjct: 69 -LYAVVSEEPIYIVTEYMNKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM-- 124
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L+ KI+ + L L E+ E + G P + P + G+
Sbjct: 125 -NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTA-PEAALYGR 182
Query: 662 LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACL 721
K D++ FG++L E++ K R + N+ E R P C
Sbjct: 183 FTIKSDVWSFGILLTELVT----KGRVPYPGMNNR-----EVLEQVERGYRMP-----CP 228
Query: 722 DESLKTMMEVCVRCLLKNPAERPSVE 747
+ ++ E+ + C K+P ERP+ E
Sbjct: 229 QDCPISLHELMIHCWKKDPEERPTFE 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R KN F+ A++ L +++K +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF DS+ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 66 RHPNILRLYG-----YFHDST--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 119 NALSYCHSKKVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRAA---- 165
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A D
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQD 213
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 214 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTR--NFMHHIELISKLRHRHLVSALGHC 542
+G GS G ++R +G+ VA++ L + H+ R F+ + ++ +LRH ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
+ + ++ EY+ G+L + + A + L +R+S A VAKG+ +LH
Sbjct: 104 -------TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN--------AEKVGHVIPYSGSIDP 654
P + NLK ++L+D+ K+ + L L + A + P +P
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 655 TNSARGKLEEKIDIYDFGLILLEI 678
+N EK D+Y FG+IL E+
Sbjct: 216 SN-------EKSDVYSFGVILWEL 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTR--NFMHHIELISKLRHRHLVSALGHC 542
+G GS G ++R +G+ VA++ L + H+ R F+ + ++ +LRH ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
+ + ++ EY+ G+L + + A + L +R+S A VAKG+ +LH
Sbjct: 104 -------TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN--------AEKVGHVIPYSGSIDP 654
P + +LK ++L+D+ K+ + L L + A + P +P
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 655 TNSARGKLEEKIDIYDFGLILLEI 678
+N EK D+Y FG+IL E+
Sbjct: 216 SN-------EKSDVYSFGVILWEL 232
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 46/307 (14%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 67 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + A ++ +
Sbjct: 120 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSCHAPSSRRTT---- 166
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
SG++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 214
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH 764
R S V+ D + ++ R L NP++RP + +VL + A +
Sbjct: 215 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
Query: 765 SQSSEGS 771
SQ+ E +
Sbjct: 271 SQNKESA 277
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 69 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 122 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRAA---- 168
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 216
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 217 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 66 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 119 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRAA---- 165
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 213
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 214 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 92 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 145 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 191
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 239
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 240 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 66 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 119 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTD---- 165
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 213
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 214 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 66 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 119 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 165
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 213
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 214 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 68 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+++ + A ++ +
Sbjct: 121 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIANFGWSVHAPSSRRTT---- 167
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 215
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 216 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 69 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+++ + A ++ +
Sbjct: 122 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIANFGWSVHAPSSRRTT---- 168
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 216
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 217 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 66 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 119 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRT----E 165
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 213
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 214 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 67 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 120 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTD---- 166
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 214
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 215 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 66 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 119 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTD---- 165
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 213
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 214 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 69 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 122 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 168
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 216
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 217 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 65 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 117
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 118 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 164
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 212
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 213 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 55/304 (18%)
Query: 457 GALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMK 512
GA+G + R ++LE +F+ +G+G G +Y R K F+ A++ L +++
Sbjct: 1 GAMG--SKRQWALE-------DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE 51
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---S 569
K +E+ S LRH +++ G YF D++ R++LI EY P GT+
Sbjct: 52 KAGVEHQLRREVEIQSHLRHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQ 104
Query: 570 WISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629
+S+ ++ T+ ++ A+ + +H I P ++LL KI+
Sbjct: 105 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIAD 155
Query: 630 YNLPLLAENAEKVGHVIPYSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKS 686
+ + A ++ + G++D P G++ +EK+D++ G++ E +VG+P
Sbjct: 156 FGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP--- 208
Query: 687 RKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV 746
+A + R S V+ D + ++ R L NP++RP +
Sbjct: 209 ---------PFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 255
Query: 747 EDVL 750
+VL
Sbjct: 256 REVL 259
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 83 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 135
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 136 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 182
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 230
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 231 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 71 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 124 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTD---- 170
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 218
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 219 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 66 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 119 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTX---- 165
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 213
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 214 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 71 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 124 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 170
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 218
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 219 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 69 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 122 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 168
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 216
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 217 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 66 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 119 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRXX---- 165
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 213
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 214 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 68 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 121 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRXX---- 167
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 215
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 216 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 71 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 124 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 170
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G+ +EK+D++ G++ E +VG+P +A +
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 218
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 219 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 92 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 145 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRDD---- 191
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 239
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 240 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 69 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 122 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRXX---- 168
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 216
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 217 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 125/286 (43%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI---SEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P G + + S+ ++ T+ ++
Sbjct: 71 RHPNILRLYG-----YFHDAT--RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELA 123
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 124 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 170
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 218
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 219 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 69 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 122 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRDD---- 168
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 216
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 217 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 125/286 (43%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI---SEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P G + + S+ ++ T+ ++
Sbjct: 71 RHPNILRLYG-----YFHDAT--RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELA 123
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 124 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRXX---- 170
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 218
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 219 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 63 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 115
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 116 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRTT---- 162
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 210
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 211 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKL 530
A +F+ +G+G G +Y R K F+ A++ L +++K +E+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRIS 587
RH +++ G YF D++ R++LI EY P GT+ +S+ ++ T+ ++
Sbjct: 67 RHPNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
A+ + +H I P ++LL KI+ + + A ++ +
Sbjct: 120 NALSYCHSKRVIHRDIKP---------ENLLLGSAGELKIADFGWSVHAPSSRRDT---- 166
Query: 648 YSGSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704
G++D P G++ +EK+D++ G++ E +VG+P +A +
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQE 214
Query: 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
R S V+ D + ++ R L NP++RP + +VL
Sbjct: 215 TYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKLRH 532
+FD +G+G G +Y R + F+ A++ L +++K +E+ S LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRISAA 589
+++ G YF D++ R++LI EY P GT+ +S ++ T+ ++ A
Sbjct: 72 PNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
+ + +H I P ++LL N KI+ + + A ++ +
Sbjct: 125 LSYCHSKRVIHRDIKP---------ENLLLGSNGELKIADFGWSVHAPSSRRT----TLC 171
Query: 650 GSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRP 683
G++D P G++ +EK+D++ G++ E +VG P
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RTF ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+ NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGFVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RTF ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+ NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RTF ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+ NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RTF ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+ NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 78 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 128
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+AE + G P + P G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTA-PEAINYGT 186
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 234
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 235 CPEE-LYQLMRLCWK---ERPEDRPTFD 258
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RTF ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+ NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKLRH 532
+FD +G+G G +Y R + F+ A++ L +++K +E+ S LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLR---SWISEGHAHQSLTWTQRISAA 589
+++ G YF D++ R++LI EY P GT+ +S ++ T+ ++ A
Sbjct: 72 PNILRLYG-----YFHDAT--RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
+ + +H I P ++LL N KI+ + + A ++ +
Sbjct: 125 LSYCHSKRVIHRDIKP---------ENLLLGSNGELKIADFGWSVHAPSSRR----DTLC 171
Query: 650 GSID--PTNSARGKL-EEKIDIYDFGLILLEIIVGRP 683
G++D P G++ +EK+D++ G++ E +VG P
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RT+ ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+ NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RT+ ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+ NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 132/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RT+ ++ E E N +G G G++ GRLK
Sbjct: 10 GHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 69
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 70 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 122
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EY+ NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 123 TEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNIL 177
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 178 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 236
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 237 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 283
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 284 ---CWQKDRNNRPKFEQIV 299
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL------ 69
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ + I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 70 --YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 124
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
NL+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 125 -NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINYGT 182
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 230
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 231 CPEE-LYQLMRLCWK---ERPEDRPTFD 254
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 41/290 (14%)
Query: 473 EEATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELI 527
E N +G G G++ GRLK VAI+ LK+ R +F+ ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 528 SKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRIS 587
+ H +++ G + + ++ EY+ NG+L S++ + A T Q +
Sbjct: 72 GQFDHPNIIRLEGVV-------TKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVG 122
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV----- 642
G+A G+++L G +L +IL++ NLV K+S + L + E+ +
Sbjct: 123 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAV 700
G IP + P A K D++ +G++L E++ RP D++K
Sbjct: 180 GGKIPIRWT-SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK------ 232
Query: 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
DE R + P ++ C + M++ C K+ RP E ++
Sbjct: 233 -AVDEGYR---LPPPMD--CPAALYQLMLD----CWQKDRNNRPKFEQIV 272
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 41/290 (14%)
Query: 473 EEATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELI 527
E N +G G G++ GRLK VAI+ LK+ R +F+ ++
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 528 SKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRIS 587
+ H +++ G + + ++ EY+ NG+L S++ + A T Q +
Sbjct: 89 GQFDHPNIIRLEGVV-------TKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVG 139
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV----- 642
G+A G+++L G +L +IL++ NLV K+S + L + E+ +
Sbjct: 140 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAV 700
G IP + P A K D++ +G++L E++ RP D++K
Sbjct: 197 GGKIPIRWT-SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK------ 249
Query: 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
DE R + P ++ C + M++ C K+ RP E ++
Sbjct: 250 -AVDEGYR---LPPPMD--CPAALYQLMLD----CWQKDRNNRPKFEQIV 289
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RTF ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
E + NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEXMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGAVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 86
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 87 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 137
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 138 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA-PEAINYGT 195
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 243
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 244 CPEE-LYQLMRLCWK---ERPEDRPTFD 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 83
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 84 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 134
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA-PEAINYGT 192
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 240
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 241 CPEE-LYQLMRLCWK---ERPEDRPTFD 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 79
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 80 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 130
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 131 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA-PEAINYGT 188
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 236
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 237 CPEE-LYQLMRLCWK---ERPEDRPTFD 260
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 85
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 86 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 136
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 137 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA-PEAINYGT 194
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 242
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 243 CPEE-LYQLMRLCWK---ERPEDRPTFD 266
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 78 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 128
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA-PEAINYGT 186
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 234
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 235 CPEE-LYQLMRLCWK---ERPEDRPTFD 258
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 130/276 (47%), Gaps = 41/276 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHC 542
+ E G++++GR + G + ++ LK++ + +R+F + H +++ LG C
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
LI ++P G+L + + EG + + +Q + A+ +A+G+ FLHT
Sbjct: 77 -----QSPPAPHPTLITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT- 129
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSAR 659
+ P + + L +++D+++ A+IS ++ ++ ++ V P + P ++ R
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNR 189
Query: 660 GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL--LKNQLQAVVTADESARRSM---VDP 714
D++ F ++L E++ +EV L N + A E R ++ + P
Sbjct: 190 ----RSADMWSFAVLLWELVT-------REVPFADLSNMEIGMKVALEGLRPTIPPGISP 238
Query: 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
V+K +M++C+ ++PA+RP + ++
Sbjct: 239 HVSK---------LMKICMN---EDPAKRPKFDMIV 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 82
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 83 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 133
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 134 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINYGT 191
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 239
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 240 CPEE-LYQLMRLCWK---ERPEDRPTFD 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 83
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 84 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 134
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINYGT 192
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 240
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 241 CPEE-LYQLMRLCWK---ERPEDRPTFD 264
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 79 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 129
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 130 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA-PEAINYGT 187
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 235
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 236 CPEE-LYQLMRLCWK---ERPEDRPTFD 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 78 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 128
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINYGT 186
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 234
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 235 CPEE-LYQLMRLCWK---ERPEDRPTFD 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 87
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 88 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 138
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 139 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINYGT 196
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 244
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 245 CPEE-LYQLMRLCWK---ERPEDRPTFD 268
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G N T VA++ LK S + F+ L+ L+H LV
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLV-------R 72
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
Y + I++I EY+ G+L ++ + L + I + +A+G+ ++
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIER--- 128
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ ++L+ ++L+ KI+ + L + E+ E + G P + P G
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAINFGC 187
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ G+ P R D V+TA R P V
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD--------VMTALSQGYRM---PRVEN- 235
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C DE L +M++C + + ERP+ +
Sbjct: 236 CPDE-LYDIMKMCWK---EKAEERPTFD 259
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 78 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 128
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA-PEAINYGT 186
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 234
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 235 CPEE-LYQLMRLCWK---ERPEDRPTFD 258
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G T VA++ LK + S F+ L+ +L+H+ LV
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 72
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
+ I++I EY+ NG+L ++ + LT + + A +A+G+ F+
Sbjct: 73 ------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER-- 123
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ +IL+ L KI+ + L L E+ E + G P + P G
Sbjct: 124 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINYGT 181
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L EI+ GR P ++++N E R MV P
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYR-MVRP---DN 229
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E L +M +C + + P +RP+ +
Sbjct: 230 CPEE-LYQLMRLCWK---ERPEDRPTFD 253
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 131/319 (41%), Gaps = 54/319 (16%)
Query: 457 GALGLPAYRTF-----------SLEEL--EEATNNFDTSAFMGEGSQGQMYRGRLK---- 499
G L LP RT+ ++ E E N +G G G++ GRLK
Sbjct: 12 GHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 500 NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
VAI+ LK+ R +F+ ++ + H +++ G + + ++
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-------TKSKPVMIV 124
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
E + NG+L S++ + A T Q + G+A G+++L G +L +IL
Sbjct: 125 TEXMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNIL 179
Query: 619 LDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGL 673
++ NLV K+S + L + E+ + G IP + P A K D++ +G+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT-SPEAIAYRKFTSASDVWSYGI 238
Query: 674 ILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
+L E++ RP D++K DE R + P ++ C + M++
Sbjct: 239 VLWEVMSYGERPYWEMSNQDVIK-------AVDEGYR---LPPPMD--CPAALYQLMLD- 285
Query: 732 CVRCLLKNPAERPSVEDVL 750
C K+ RP E ++
Sbjct: 286 ---CWQKDRNNRPKFEQIV 301
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 47/297 (15%)
Query: 485 MGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG+ G+++ N VA++ LK + ++F EL++ L+H+H+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------------SEGHAHQSLTWTQRI 586
G C E + ++FEY+ +G L ++ E A L Q +
Sbjct: 109 FGVCTEG-------RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAENAEKVGH 644
+ A VA G+ +L G+ +L + L+ Q LV KI + + + + + +VG
Sbjct: 162 AVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 218
Query: 645 --VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702
++P + P + K + D++ FG++L EI + L + +T
Sbjct: 219 RTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT---YGKQPWYQLSNTEAIDCIT 274
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759
R +AC E M C + P +R S++DV LQ AQ
Sbjct: 275 QGRELERP-------RACPPEVYAIMRG----CWQREPQQRHSIKDVHARLQALAQA 320
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 55/293 (18%)
Query: 474 EATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLK---MKKCHSTRNFMHHIELISK 529
E +F +G+GS +YR + G VAI+ + M K + + +++ +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-------SEGHA----HQ 578
L+H ++ YF+DS+ ++L+ E NG + ++ SE A HQ
Sbjct: 68 LKHPSILELYN-----YFEDSNY--VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
Query: 579 SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL-LAE 637
+T G+ +LH+ G+ +L ++++LL +N+ KI+ + L L
Sbjct: 121 IIT-------------GMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQL 697
EK + I P + R + D++ G + +++GRP + D +KN L
Sbjct: 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP---PFDTDTVKNTL 221
Query: 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
VV AD P+ L K ++ +R +NPA+R S+ VL
Sbjct: 222 NKVVLADYEM------PSF----LSIEAKDLIHQLLR---RNPADRLSLSSVL 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 485 MGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG+ G+++ N VA++ LK ++ ++F EL++ L+H H+V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI----------SEGHAHQSLTWTQRISA 588
G C E + ++FEY+ +G L ++ +EG+ LT +Q +
Sbjct: 81 YGVCVEG-------DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL--PLLAENAEKV-GHV 645
A +A G+ +L + +L + L+ +NL+ KI + + + + + +V GH
Sbjct: 134 AQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
Query: 646 IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII 679
+ + P + K + D++ G++L EI
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 485 MGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG+ G+++ N VA++ LK + ++F EL++ L+H+H+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------------SEGHAHQSLTWTQRI 586
G C E + ++FEY+ +G L ++ E A L Q +
Sbjct: 80 FGVCTEG-------RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAENAEKVGH 644
+ A VA G+ +L G+ +L + L+ Q LV KI + + + + + +VG
Sbjct: 133 AVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 189
Query: 645 --VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702
++P + P + K + D++ FG++L EI + L + +T
Sbjct: 190 RTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT---YGKQPWYQLSNTEAIDCIT 245
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
R +AC E M C + P +R S++DV LQ AQ
Sbjct: 246 QGRELERP-------RACPPEVYAIMRG----CWQREPQQRHSIKDVHARLQALAQ 290
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 485 MGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG+ G+++ N VA++ LK + ++F EL++ L+H+H+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI------------SEGHAHQSLTWTQRI 586
G C E + ++FEY+ +G L ++ E A L Q +
Sbjct: 86 FGVCTEG-------RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLAENAEKVGH 644
+ A VA G+ +L G+ +L + L+ Q LV KI + + + + + +VG
Sbjct: 139 AVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 195
Query: 645 --VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702
++P + P + K + D++ FG++L EI + L + +T
Sbjct: 196 RTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT---YGKQPWYQLSNTEAIDCIT 251
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
R +AC E M C + P +R S++DV LQ AQ
Sbjct: 252 QGRELERP-------RACPPEVYAIMRG----CWQREPQQRHSIKDVHARLQALAQ 296
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTF-----VAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSA 538
+G G G++Y+G LK + VAI+ LK R +F+ ++ + H +++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G S + +I EY+ NG L ++ E S+ Q + G+A G+++
Sbjct: 112 EGVI-------SKYKPMMIITEYMENGALDKFLREKDGEFSVL--QLVGMLRGIAAGMKY 162
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSID 653
L +L +IL++ NLV K+S + L + E+ + G IP +
Sbjct: 163 LAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII 679
S R K D++ FG+++ E++
Sbjct: 220 EAISYR-KFTSASDVWSFGIVMWEVM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 473 EEATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELI 527
E N +G G G++ GRLK VAI+ LK+ R +F+ ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 528 SKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRIS 587
+ H +++ G + + ++ E + NG+L S++ + A T Q +
Sbjct: 72 GQFDHPNIIRLEGVV-------TKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQLVG 122
Query: 588 AAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV----- 642
G+A G+++L G +L +IL++ NLV K+S + L + E+ +
Sbjct: 123 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAV 700
G IP + P A K D++ +G++L E++ RP D++K
Sbjct: 180 GGKIPIRWT-SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK------ 232
Query: 701 VTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
DE R + P ++ C + M++ C K+ RP E ++
Sbjct: 233 -AVDEGYR---LPPPMD--CPAALYQLMLD----CWQKDRNNRPKFEQIV 272
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST----RNFMHHIELISKLRH 532
N+ +GEG+ GQ+ + R+K +K K +++ R+F +E++ KL H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 533 R-HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ------------- 578
++++ LG C ++L EY P+G L ++ + +
Sbjct: 82 HPNIINLLGAC-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 579 SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE- 637
+L+ Q + A VA+G+ +L NL +IL+ +N VAKI+ + L E
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSRGQEV 191
Query: 638 NAEKVGHVIPY--------SGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSR 687
+K +P + S+ TNS D++ +G++L EI+ G P
Sbjct: 192 YVKKTMGRLPVRWMAIESLNYSVYTTNS---------DVWSYGVLLWEIVSLGGTPYCGM 242
Query: 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+L + Q ++ +N C DE M + C + P ERPS
Sbjct: 243 TCAELYEKLPQGY----------RLEKPLN--CDDEVYDLMRQ----CWREKPYERPSFA 286
Query: 748 DVLWNL 753
+L +L
Sbjct: 287 QILVSL 292
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 41/271 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ T VA++ +K S F+ ++ L+H LV H
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKL--HAV- 78
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ I++I E++ G+L ++ S+ + Q L + I + +A+G+ F+
Sbjct: 79 -----VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR- 130
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARG 660
+L+ +IL+ +LV KI+ + L + E+ E + G P + P G
Sbjct: 131 --NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAINFG 187
Query: 661 KLEEKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716
K D++ FG++L+EI+ GR P S E V+ A E R M P
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----------VIRALERGYR-MPRP-- 234
Query: 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+ C +E MM RC P ERP+ E
Sbjct: 235 -ENCPEELYNIMM----RCWKNRPEERPTFE 260
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 120/287 (41%), Gaps = 46/287 (16%)
Query: 485 MGEGSQGQMYRGRL------KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEG+ G+++ K+ VA++ LK + ++F EL++ L+H H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----------EGHAHQS---LTWTQR 585
G C + ++FEY+ +G L ++ +G Q+ L +Q
Sbjct: 83 YGVC-------GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL--PLLAENAEKV- 642
+ A +A G+ +L + +L + L+ NL+ KI + + + + + +V
Sbjct: 136 LHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 192
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702
GH + + P + K + D++ FG+IL EI + L ++ +T
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT---YGKQPWFQLSNTEVIECIT 249
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
R V P K + +V + C + P +R +++++
Sbjct: 250 QGRVLERPRVCP-----------KEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 467 FSLEELEEATNNF----DTSAF-----MGEGSQGQMYRGRLK----NGTFVAIRCLKMKK 513
F+ E+ +A F D S +G G G++ GRLK VAI+ LK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 514 CHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
R +F+ ++ + H +++ G +C + +I EY+ NG+L +++
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKC-------KPVMIITEYMENGSLDAFLR 122
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
+ T Q + G+ G+++L +L +IL++ NLV K+S + +
Sbjct: 123 KNDGR--FTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGM 177
Query: 633 PLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLK 685
+ E+ + G IP + P A K D++ +G+++ E++ RP
Sbjct: 178 SRVLEDDPEAAYTTRGGKIPIRWTA-PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 236
Query: 686 SRKEVDLLK 694
D++K
Sbjct: 237 DMSNQDVIK 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 116/285 (40%), Gaps = 57/285 (20%)
Query: 485 MGEGSQGQMYR-GRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G GQ + + G + ++ L + R F+ ++++ L H +++ +G +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ R+ I EY+ GTLR I W+QR+S A +A G+ +LH+
Sbjct: 78 K-------DKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHSM- 127
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLL---------------AENAEKVGHVI-- 646
+ +L + L+ +N ++ + L L + +K V+
Sbjct: 128 --NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706
PY + + N +EK+D++ FG++L EII GR V AD
Sbjct: 186 PYWMAPEMINGR--SYDEKVDVFSFGIVLCEII-GR------------------VNADPD 224
Query: 707 ARRSMVDPAVN------KACLDESLKTMMEVCVRCLLKNPAERPS 745
+D +N + C + + VRC +P +RPS
Sbjct: 225 YLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPS 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 84 ------TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 138 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 187
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 243
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 244 -------EKVYELMRACWQW---NPSDRPSFAEI 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 460 GLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTR 518
G P Y + +E + +G G G++Y G K + VA++ LK +
Sbjct: 1 GSPNYDKWEMER-----TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVE 54
Query: 519 NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ 578
F+ ++ +++H +LV LG C + ++I E++ G L ++ E + +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVC-------TREPPFYIIIEFMTYGNLLDYLRECNRQE 107
Query: 579 S-----LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633
L +IS+A+ + F+H +L + L+ +N + K++ + L
Sbjct: 108 VSAVVLLYMATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHLVKVADFGLS 158
Query: 634 LLAENAEKVGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690
L H P + P + A K K D++ FG++L EI + +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 216
Query: 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
DL +Q+ ++ D R P E + +M C + NP++RPS ++
Sbjct: 217 DL--SQVYELLEKDYRMERPEGCP--------EKVYELMRACWQW---NPSDRPSFAEI 262
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 49/282 (17%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
+G G G++ GRLK VAI+ LK+ R +F+ ++ + H ++V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 540 GHCFECYFDDSSVSR---IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
G V+R + ++ E++ NG L +++ + H Q T Q + G+A G+
Sbjct: 111 G----------VVTRGKPVMIVIEFMENGALDAFLRK-HDGQ-FTVIQLVGMLRGIAAGM 158
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGS 651
++L G +L +IL++ NLV K+S + L + E+ + G IP +
Sbjct: 159 RYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 652 IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR-- 709
P K D++ +G+++ E++ S E Q V+ A E R
Sbjct: 216 A-PEAIQYRKFTSASDVWSYGIVMWEVM------SYGERPYWDMSNQDVIKAIEEGYRLP 268
Query: 710 -SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
M PA + ++ + C K AERP E ++
Sbjct: 269 APMDCPA-----------GLHQLMLDCWQKERAERPKFEQIV 299
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 285
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 286 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H NL + L+ +N + K++ + L L H P + P
Sbjct: 340 IH---------RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 389
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 445
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 446 -------EKVYELMRACWQW---NPSDRPSFAEI 469
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 79
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 80 ------TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 134 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA-PE 183
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 239
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 240 -------EKVYELMRACWQW---NPSDRPSFAEI 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 457 GALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS 516
G+L + Y+ +EE+ +G G+ G + + + + VAI+ ++ +
Sbjct: 1 GSLHMIDYKEIEVEEV------------VGRGAFGVVCKAKWR-AKDVAIKQIESES--E 45
Query: 517 TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA 576
+ F+ + +S++ H ++V G C ++ + L+ EY G+L + +
Sbjct: 46 RKAFIVELRQLSRVNHPNIVKLYGAC---------LNPVCLVMEYAEGGSLYNVLHGAEP 96
Query: 577 HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL-DQNLVAKISSYNLPLL 635
T +S + ++G+ +LH+ + +LK ++LL V KI +
Sbjct: 97 LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 156
Query: 636 AENAEKVGHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ H+ GS + P EK D++ +G+IL E+I RK D
Sbjct: 157 IQT-----HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-----RRKPFDE 206
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ ++ A + R P + L + ++++M RC K+P++RPS+E+++
Sbjct: 207 IGGPAFRIMWAVHNGTRP---PLIKN--LPKPIESLM---TRCWSKDPSQRPSMEEIV 256
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 460 GLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTR 518
G P Y + +E + +G G G++Y G K + VA++ LK +
Sbjct: 1 GSPNYDKWEMER-----TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVE 54
Query: 519 NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ 578
F+ ++ +++H +LV LG C + ++I E++ G L ++ E + +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVC-------TREPPFYIIIEFMTYGNLLDYLRECNRQE 107
Query: 579 S-----LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633
L +IS+A+ + F+H +L + L+ +N + K++ + L
Sbjct: 108 VSAVVLLYMATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHLVKVADFGLS 158
Query: 634 LLAENAEKVGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690
L H P + P + A K K D++ FG++L EI + +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 216
Query: 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
DL +Q+ ++ D R P E + +M C + NP++RPS ++
Sbjct: 217 DL--SQVYELLEKDYRMERPEGCP--------EKVYELMRACWQW---NPSDRPSFAEI 262
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST----RNFMHHIELISKLRH 532
N+ +GEG+ GQ+ + R+K +K K +++ R+F +E++ KL H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 533 R-HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ------------- 578
++++ LG C ++L EY P+G L ++ + +
Sbjct: 85 HPNIINLLGAC-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 579 SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE- 637
+L+ Q + A VA+G+ +L +L +IL+ +N VAKI+ + L E
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 194
Query: 638 NAEKVGHVIPY--------SGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSR 687
+K +P + S+ TNS D++ +G++L EI+ G P
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNS---------DVWSYGVLLWEIVSLGGTPYCGM 245
Query: 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+L + Q ++ +N C DE M + C + P ERPS
Sbjct: 246 TCAELYEKLPQGY----------RLEKPLN--CDDEVYDLMRQ----CWREKPYERPSFA 289
Query: 748 DVLWNL 753
+L +L
Sbjct: 290 QILVSL 295
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST----RNFMHHIELISKLRH 532
N+ +GEG+ GQ+ + R+K +K K +++ R+F +E++ KL H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 533 R-HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ------------- 578
++++ LG C ++L EY P+G L ++ + +
Sbjct: 75 HPNIINLLGAC-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 579 SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE- 637
+L+ Q + A VA+G+ +L +L +IL+ +N VAKI+ + L E
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 184
Query: 638 NAEKVGHVIPY--------SGSIDPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSR 687
+K +P + S+ TNS D++ +G++L EI+ G P
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNS---------DVWSYGVLLWEIVSLGGTPYCGM 235
Query: 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+L + Q ++ +N C DE M + C + P ERPS
Sbjct: 236 TCAELYEKLPQGY----------RLEKPLN--CDDEVYDLMRQ----CWREKPYERPSFA 279
Query: 748 DVLWNL 753
+L +L
Sbjct: 280 QILVSL 285
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 84 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 138 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA-PE 187
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 243
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 244 -------EKVYELMRACWQW---NPSDRPSFAEI 267
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 24/225 (10%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+F+ +G+GS G+++ K F AI+ LK M + + R L
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLS 73
Query: 537 SALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
A H F C F + +F + EY+ G L I H ++ A +
Sbjct: 74 LAWEHPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEI 128
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
G+QFLH+ G+ +LK+ +ILLD++ KI+ + + EN + G+
Sbjct: 129 ILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGM--CKENMLGDAKTNEFCGTP 183
Query: 653 D---PTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLL 693
D P K +D + FG++L E+++G+ P + E +L
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 282
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 283 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H NL + L+ +N + K++ + L L H P + P
Sbjct: 337 IH---------RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 386
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 387 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 442
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 443 -------EKVYELMRACWQW---NPSDRPSFAEI 466
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 84 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 138 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 187
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 243
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 244 -------EKVYELMRACWQW---NPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 460 GLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTR 518
G P Y + +E + +G G G++Y G K + VA++ LK +
Sbjct: 14 GSPNYDKWEMER-----TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVE 67
Query: 519 NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ 578
F+ ++ +++H +LV LG C + ++I E++ G L ++ E + +
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQE 120
Query: 579 S-----LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633
L +IS+A+ + F+H +L + L+ +N + K++ + L
Sbjct: 121 VNAVVLLYMATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHLVKVADFGLS 171
Query: 634 LLAENAEKVGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690
L H P + P + A K K D++ FG++L EI + +
Sbjct: 172 RLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 229
Query: 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
DL +Q+ ++ D R P E + +M C + NP++RPS ++
Sbjct: 230 DL--SQVYELLEKDYRMERPEGCP--------EKVYELMRACWQW---NPSDRPSFAEI 275
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 82
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 83 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 137 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 186
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 242
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 243 -------EKVYELMRACWQW---NPSDRPSFAEI 266
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 324
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 325 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H NL + L+ +N + K++ + L L H P + P
Sbjct: 379 IH---------RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 428
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 429 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 484
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 485 -------EKVYELMRACWQW---NPSDRPSFAEI 508
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 41/271 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ T VA++ +K S F+ ++ L+H LV H
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKL--HAV- 251
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ I++I E++ G+L ++ S+ + Q L + I + +A+G+ F+
Sbjct: 252 -----VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR- 303
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARG 660
+L+ +IL+ +LV KI+ + L + E+ E + G P + P G
Sbjct: 304 --NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAINFG 360
Query: 661 KLEEKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAV 716
K D++ FG++L+EI+ GR P S E V+ A E R M P
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----------VIRALERGYR-MPRP-- 407
Query: 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+ C +E MM RC P ERP+ E
Sbjct: 408 -ENCPEELYNIMM----RCWKNRPEERPTFE 433
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 129/312 (41%), Gaps = 45/312 (14%)
Query: 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIEL 526
SL++ E + +G G G++Y G K + VA++ LK + F+ +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 60
Query: 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LT 581
+ +++H +LV LG C + ++I E++ G L ++ E + + L
Sbjct: 61 MKEIKHPNLVQLLGVC-------TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
+IS+A+ + F+H +L + L+ +N + K++ + L L
Sbjct: 114 MATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTX 164
Query: 642 VGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698
H P + P + A K K D++ FG++L EI + +D +Q+
Sbjct: 165 TAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID--PSQVY 220
Query: 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++ D R P E + +M C + NP++RPS ++ + F
Sbjct: 221 ELLEKDYRMERPEGCP--------EKVYELMRACWQW---NPSDRPSFAEI--HQAFETM 267
Query: 759 VQDAWHSQSSEG 770
Q++ S S EG
Sbjct: 268 FQES--SISDEG 277
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 78
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 79 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 133 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 182
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 238
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 239 -------EKVYELMRACWQW---NPSDRPSFAEI 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 96
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + HA + + + + + KG+++L T +L +IL++
Sbjct: 97 YLPYGSLRDYL-QAHA-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 151
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 677 EIIV 680
E+
Sbjct: 212 ELFT 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ + VAI+ +K + S F+ +++ L H LV G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-- 88
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEG----HAHQSLTWTQRISAAIGVAKGIQFLH 600
+ IF+I EY+ NG L +++ E Q L + + A+ + QFLH
Sbjct: 89 -----TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 143
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNS 657
+L + L++ V K+S + L L E VG P S P
Sbjct: 144 ---------RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWS-PPEVL 193
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
K K DI+ FG+++ EI
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEI 214
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 460 GLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTR 518
G P Y + +E + +G G G++Y G K + VA++ LK +
Sbjct: 1 GSPNYDKWEMER-----TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVE 54
Query: 519 NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ 578
F+ ++ +++H +LV LG C + ++I E++ G L ++ E + +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 579 S-----LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633
L +IS+A+ + F+H +L + L+ +N + K++ + L
Sbjct: 108 VSAVVLLYMATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHLVKVADFGLS 158
Query: 634 LLAENAEKVGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690
L H P + P + A K K D++ FG++L EI + +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 216
Query: 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
DL +Q+ ++ D R P E + +M C + NP++RPS ++
Sbjct: 217 DL--SQVYELLEKDYRMERPEGCP--------EKVYELMRACWQW---NPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 460 GLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTR 518
G P Y + +E + +G G G++Y G K + VA++ LK +
Sbjct: 1 GSPNYDKWEMER-----TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVE 54
Query: 519 NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ 578
F+ ++ +++H +LV LG C + ++I E++ G L ++ E + +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 579 S-----LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633
L +IS+A+ + F+H +L + L+ +N + K++ + L
Sbjct: 108 VSAVVLLYMATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHLVKVADFGLS 158
Query: 634 LLAENAEKVGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690
L H P + P + A K K D++ FG++L EI + +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 216
Query: 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
DL +Q+ ++ D R P E + +M C + NP++RPS ++
Sbjct: 217 DL--SQVYELLEKDYRMERPEGCP--------EKVYELMRACWQW---NPSDRPSFAEI 262
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ G N T VA++ LK S + F+ L+ L+H LV
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLV-------R 71
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
Y + I++I E++ G+L ++ + L + I + +A+G+ ++
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIER--- 127
Query: 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGK 661
+L+ ++L+ ++L+ KI+ + L + E+ E + G P + P G
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAINFGC 186
Query: 662 LEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLL 693
K +++ FG++L EI+ G+ P R D++
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G + G + G VA++C+K + + F+ ++++LRH +LV LG E
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQS----LTWTQRISAAIGVAKGIQFL 599
++++ EY+ G+L ++ S G + L ++ + A+ +G F+
Sbjct: 86 ------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR 659
H +L ++L+ ++ VAK+S + L A + + G +P + P
Sbjct: 140 H---------RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVKWTA-PEALRE 188
Query: 660 GKLEEKIDIYDFGLILLEI 678
K K D++ FG++L EI
Sbjct: 189 KKFSTKSDVWSFGILLWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G + G + G VA++C+K + + F+ ++++LRH +LV LG E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQS----LTWTQRISAAIGVAKGIQFL 599
++++ EY+ G+L ++ S G + L ++ + A+ +G F+
Sbjct: 71 ------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 124
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR 659
H +L ++L+ ++ VAK+S + L A + + G +P + P
Sbjct: 125 H---------RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVKWTA-PEALRE 173
Query: 660 GKLEEKIDIYDFGLILLEI 678
K K D++ FG++L EI
Sbjct: 174 KKFSTKSDVWSFGILLWEI 192
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 78
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 79 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 133 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 182
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 238
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 239 -------EKVYELMRACWQW---NPSDRPSFAEI 262
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 25/222 (11%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
+G G G++ GRLK VAI+ LK+ R +F+ ++ + H +++
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G + + ++ EY+ NG+L +++ + T Q + G++ G+++L
Sbjct: 90 GVV-------TKSKPVMIVTEYMENGSLDTFLKKNDGQ--FTVIQLVGMLRGISAGMKYL 140
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDP 654
G +L +IL++ NLV K+S + L + E+ + G IP + P
Sbjct: 141 SDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA-P 196
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLK 694
A K D++ +G+++ E++ RP D++K
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIK 238
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 84 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 138 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 187
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 243
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 244 -------EKVYELMRACWQW---NPSDRPSFAEI 267
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 94
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T NL +IL++
Sbjct: 95 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRNLATRNILVE 149
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 150 NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 209
Query: 677 EIIV 680
E+
Sbjct: 210 ELFT 213
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 80
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 81 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 135 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 184
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 240
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 241 -------EKVYELMRACWQW---NPSDRPSFAEI 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 84 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 138 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 187
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 243
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 244 -------EKVYELMRACWQW---NPSDRPSFAEI 267
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G + G + G VA++C+K + + F+ ++++LRH +LV LG E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQS----LTWTQRISAAIGVAKGIQFL 599
++++ EY+ G+L ++ S G + L ++ + A+ +G F+
Sbjct: 258 ------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR 659
H +L ++L+ ++ VAK+S + L A + + G +P + P
Sbjct: 312 H---------RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVKWTA-PEALRE 360
Query: 660 GKLEEKIDIYDFGLILLEI 678
K K D++ FG++L EI
Sbjct: 361 KKFSTKSDVWSFGILLWEI 379
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ + VAI+ +K + S F+ +++ L H LV G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-- 68
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEG----HAHQSLTWTQRISAAIGVAKGIQFLH 600
+ IF+I EY+ NG L +++ E Q L + + A+ + QFLH
Sbjct: 69 -----TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNS 657
+L + L++ V K+S + L L E VG P S P
Sbjct: 124 ---------RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-PPEVL 173
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
K K DI+ FG+++ EI
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEI 194
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 17/186 (9%)
Query: 500 NGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
G VA++ LK R+ + I+++ L H H++ G C +D+ + + L+
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCC-----EDAGAASLQLV 113
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EYVP G+LR ++ S+ Q + A + +G+ +LH +L ++L
Sbjct: 114 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVL 166
Query: 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS----IDPTNSARGKLEEKIDIYDFGLI 674
LD + + KI + L + V S P K D++ FG+
Sbjct: 167 LDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 226
Query: 675 LLEIIV 680
L E++
Sbjct: 227 LYELLT 232
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 120/278 (43%), Gaps = 34/278 (12%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+ +G G+ G + + + + VAI+ ++ + + F+ + +S++ H ++V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQIESES--ERKAFIVELRQLSRVNHPNIV 64
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
G C ++ + L+ EY G+L + + T +S + ++G+
Sbjct: 65 KLYGAC---------LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 597 QFLHTGIVPGVFSNNLKITDILL-DQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---I 652
+LH+ + +LK ++LL V KI + + H+ GS +
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT-----HMTNNKGSAAWM 170
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712
P EK D++ +G+IL E+I RK D + ++ A + R
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVIT-----RRKPFDEIGGPAFRIMWAVHNGTRP-- 223
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
P + L + ++++M RC K+P++RPS+E+++
Sbjct: 224 -PLIKN--LPKPIESLM---TRCWSKDPSQRPSMEEIV 255
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ + VAI+ +K + S F+ +++ L H LV G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-- 72
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEG----HAHQSLTWTQRISAAIGVAKGIQFLH 600
+ IF+I EY+ NG L +++ E Q L + + A+ + QFLH
Sbjct: 73 -----TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 127
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNS 657
+L + L++ V K+S + L L E VG P S P
Sbjct: 128 ---------RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-PPEVL 177
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
K K DI+ FG+++ EI
Sbjct: 178 MYSKFSSKSDIWAFGVLMWEI 198
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ + VAI+ +K + S F+ +++ L H LV G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-- 88
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEG----HAHQSLTWTQRISAAIGVAKGIQFLH 600
+ IF+I EY+ NG L +++ E Q L + + A+ + QFLH
Sbjct: 89 -----TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 143
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNS 657
+L + L++ V K+S + L L E VG P S P
Sbjct: 144 ---------RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-PPEVL 193
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
K K DI+ FG+++ EI
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEI 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ + VAI+ +K + S F+ +++ L H LV G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-- 73
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEG----HAHQSLTWTQRISAAIGVAKGIQFLH 600
+ IF+I EY+ NG L +++ E Q L + + A+ + QFLH
Sbjct: 74 -----TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 128
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNS 657
+L + L++ V K+S + L L E VG P S P
Sbjct: 129 ---------RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-PPEVL 178
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
K K DI+ FG+++ EI
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEI 199
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 80
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 81 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHV---IPYSGSIDPT 655
+H +L + L+ +N + K++ + L L H P + P
Sbjct: 135 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PE 184
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 240
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 241 -------EKVYELMRACWQW---NPSDRPSFAEI 264
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 467 FSLEELEEATNNF----DTSAF-----MGEGSQGQMYRGRLK----NGTFVAIRCLKMKK 513
F+ E+ EA F D S +G G G++ G LK FVAI+ LK
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 514 CHSTR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
R +F+ ++ + H +++ G + + + +I E++ NG+L S++
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVV-------TKSTPVMIITEFMENGSLDSFLR 126
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
+ T Q + G+A G+++L +L +IL++ NLV K+S + L
Sbjct: 127 QNDGQ--FTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGL 181
Query: 633 PLLAEN-------AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII 679
E+ +G IP + P K D++ +G+++ E++
Sbjct: 182 SRFLEDDTSDPTYTSALGGKIPIRWTA-PEAIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 33/270 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ K VA++ +K + S F + + KL H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC-- 72
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
S I+++ EY+ NG L +++ S G + L +Q + V +G+ FL +
Sbjct: 73 -----SKEYPIYIVTEYISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH- 123
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNSARG 660
+L + L+D++L K+S + + L + VG P S P
Sbjct: 124 --QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA-PEVFHYF 180
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
K K D++ FG+++ E+ + DL N + V+ + R + P +
Sbjct: 181 KYSSKSDVWAFGILMWEVFS----LGKMPYDLYTNS-EVVLKVSQGHR--LYRPHL---- 229
Query: 721 LDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ T+ ++ C + P +RP+ + +L
Sbjct: 230 ---ASDTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ + VAI+ +K + S F+ +++ L H LV G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-- 79
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEG----HAHQSLTWTQRISAAIGVAKGIQFLH 600
+ IF+I EY+ NG L +++ E Q L + + A+ + QFLH
Sbjct: 80 -----TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 134
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNS 657
+L + L++ V K+S + L L E VG P S P
Sbjct: 135 ---------RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-PPEVL 184
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
K K DI+ FG+++ EI
Sbjct: 185 MYSKFSSKSDIWAFGVLMWEI 205
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 45/268 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G+++ T VA++ +K S F+ ++ L+H LV H
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKL--HAV- 245
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
+ I++I E++ G+L ++ S+ + Q L + I + +A+G+ F+
Sbjct: 246 -----VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR- 297
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLE 663
+L+ +IL+ +LV KI+ + L +VG P + P G
Sbjct: 298 --NYIHRDLRAANILVSASLVCKIADFGLA-------RVGAKFPIKWTA-PEAINFGSFT 347
Query: 664 EKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKA 719
K D++ FG++L+EI+ GR P S E V+ A E R M P +
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGMSNPE----------VIRALERGYR-MPRP---EN 393
Query: 720 CLDESLKTMMEVCVRCLLKNPAERPSVE 747
C +E MM RC P ERP+ E
Sbjct: 394 CPEELYNIMM----RCWKNRPEERPTFE 417
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
+G G G++ GRLK VAI+ LK R +F+ ++ + H +++
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G +C + +I EY+ NG+L +++ + T Q + G+ G+++L
Sbjct: 82 GVVTKC-------KPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSGMKYL 132
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDP 654
+L +IL++ NLV K+S + + + E+ + G IP + P
Sbjct: 133 SD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA-P 188
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLK 694
A K D++ +G+++ E++ RP D++K
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 230
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKLRH 532
++FD +G+G G +Y R K F+ A++ L +++K IE+ S LRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
+++ YF D RI+L+ E+ P G L E H + + +
Sbjct: 74 PNILRMYN-----YFHDRK--RIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEEL 123
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
A + + H V ++K ++L+ KI+ + + A + + G++
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----MCGTL 176
Query: 653 D--PTNSARGKL-EEKIDIYDFGLILLEIIVGRP 683
D P GK +EK+D++ G++ E +VG P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
+G G G++ GRLK VAI+ LK R +F+ ++ + H +++
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G +C + +I EY+ NG+L +++ + T Q + G+ G+++L
Sbjct: 76 GVVTKC-------KPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSGMKYL 126
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV-----GHVIPYSGSIDP 654
+L +IL++ NLV K+S + + + E+ + G IP + P
Sbjct: 127 SD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA-P 182
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLK 694
A K D++ +G+++ E++ RP D++K
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 224
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKLRH 532
++FD +G+G G +Y R K F+ A++ L +++K IE+ S LRH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
+++ YF D RI+L+ E+ P G L E H + + +
Sbjct: 75 PNILRMYN-----YFHDRK--RIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEEL 124
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
A + + H V ++K ++L+ KI+ + + A + + G++
Sbjct: 125 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----MCGTL 177
Query: 653 D--PTNSARGKL-EEKIDIYDFGLILLEIIVGRP 683
D P GK +EK+D++ G++ E +VG P
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 17/186 (9%)
Query: 500 NGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
G VA++ LK R+ + I+++ L H H++ G C +D + L+
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCC-----EDQGEKSLQLV 96
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EYVP G+LR ++ S+ Q + A + +G+ +LH+ NL ++L
Sbjct: 97 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVL 149
Query: 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS----IDPTNSARGKLEEKIDIYDFGLI 674
LD + + KI + L + V S P K D++ FG+
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 675 LLEIIV 680
L E++
Sbjct: 210 LYELLT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 124
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 125 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 179
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 180 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 239
Query: 677 EIIV 680
E+
Sbjct: 240 ELFT 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 97
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 98 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 152
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 153 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 212
Query: 677 EIIV 680
E+
Sbjct: 213 ELFT 216
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 25/199 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G + G + G VA++C+K + + F+ ++++LRH +LV LG E
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQS----LTWTQRISAAIGVAKGIQFL 599
++++ EY+ G+L ++ S G + L ++ + A+ +G F+
Sbjct: 77 ------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 130
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR 659
H +L ++L+ ++ VAK+S + L A + + G +P + P
Sbjct: 131 H---------RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVKWTA-PEALRE 179
Query: 660 GKLEEKIDIYDFGLILLEI 678
K D++ FG++L EI
Sbjct: 180 AAFSTKSDVWSFGILLWEI 198
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 96
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 97 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 151
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 677 EIIV 680
E+
Sbjct: 212 ELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 100
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 101 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 155
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 156 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 215
Query: 677 EIIV 680
E+
Sbjct: 216 ELFT 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 92
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 93 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 147
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 148 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 207
Query: 677 EIIV 680
E+
Sbjct: 208 ELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 93
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 94 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 148
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 677 EIIV 680
E+
Sbjct: 209 ELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 93
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 94 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 148
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 677 EIIV 680
E+
Sbjct: 209 ELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 91
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 92 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 146
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 147 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 206
Query: 677 EIIV 680
E+
Sbjct: 207 ELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 98
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 99 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 153
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 154 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 213
Query: 677 EIIV 680
E+
Sbjct: 214 ELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 99
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 100 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 154
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 155 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 214
Query: 677 EIIV 680
E+
Sbjct: 215 ELFT 218
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 79
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 80 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN---AEKVGHVIPYSGSIDPT 655
+H +L + L+ +N + K++ + L L G P + P
Sbjct: 134 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA-PE 183
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 239
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 240 -------EKVYELMRACWQW---NPSDRPSFAEI 263
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCL---KMKKCHSTRNFMHHIELISKLRH 532
++FD +G+G G +Y R K F+ A++ L +++K IE+ S LRH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
+++ YF D RI+L+ E+ P G L E H + + +
Sbjct: 74 PNILRMYN-----YFHDRK--RIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEEL 123
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
A + + H V ++K ++L+ KI+ + + A + + G++
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX----MCGTL 176
Query: 653 D--PTNSARGKL-EEKIDIYDFGLILLEIIVGRP 683
D P GK +EK+D++ G++ E +VG P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 24/225 (10%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+F +G+GS G+++ K F AI+ LK M + + R L
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLS 72
Query: 537 SALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
A H F C F + +F + EY+ G L I H ++ A +
Sbjct: 73 LAWEHPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEI 127
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
G+QFLH+ G+ +LK+ +ILLD++ KI+ + + EN + G+
Sbjct: 128 ILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM--CKENMLGDAKTNXFCGTP 182
Query: 653 D---PTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLL 693
D P K +D + FG++L E+++G+ P + E +L
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 111
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 112 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 166
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 677 EIIV 680
E+
Sbjct: 227 ELFT 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 504 VAIRCLKM---KKCHSTRNFMHHIELISKLRHRHLVSALGHCFE--CYFDDSSVSRIFLI 558
VAI+ + + +K + + F + S+L H+++VS + E CY+ L+
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY---------LV 89
Query: 559 FEYVPNGTLRSWISEGHA----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614
EY+ TL +I E H ++ +T +I I A ++ +H I P
Sbjct: 90 MEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKP--------- 139
Query: 615 TDILLDQNLVAKISSYNLP-LLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFG 672
+IL+D N KI + + L+E + + HV+ P + +E DIY G
Sbjct: 140 QNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIG 199
Query: 673 LILLEIIVGRP 683
++L E++VG P
Sbjct: 200 IVLYEMLVGEP 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 111
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 112 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 166
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 167 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 677 EIIV 680
E+
Sbjct: 227 ELFT 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 17/186 (9%)
Query: 500 NGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
G VA++ LK R+ + I+++ L H H++ G C +D + L+
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCC-----EDQGEKSLQLV 96
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EYVP G+LR ++ S+ Q + A + +G+ +LH NL ++L
Sbjct: 97 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVL 149
Query: 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS----IDPTNSARGKLEEKIDIYDFGLI 674
LD + + KI + L + V S P K D++ FG+
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 675 LLEIIV 680
L E++
Sbjct: 210 LYELLT 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 485 MGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G G G++Y G K + VA++ LK + F+ ++ +++H +LV LG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC- 80
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LTWTQRISAAIGVAKGIQF 598
+ ++I E++ G L ++ E + + L +IS+A+ + F
Sbjct: 81 ------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN---AEKVGHVIPYSGSIDPT 655
+H +L + L+ +N + K++ + L L G P + P
Sbjct: 135 IH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA-PE 184
Query: 656 NSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+ A K K D++ FG++L EI + +DL +Q+ ++ D R P
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDL--SQVYELLEKDYRMERPEGCP- 240
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
E + +M C + NP++RPS ++
Sbjct: 241 -------EKVYELMRACWQW---NPSDRPSFAEI 264
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIEL 526
S+++ E + +G G G++Y G K + VA++ LK + F+ +
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 81
Query: 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LT 581
+ +++H +LV LG C + +++ EY+P G L ++ E + + L
Sbjct: 82 MKEIKHPNLVQLLGVC-------TLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLY 134
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
+IS+A+ + F+H +L + L+ +N V K++ + L L
Sbjct: 135 MATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHVVKVADFGLSRLMTGDTY 185
Query: 642 VGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI 678
H P + P + A K D++ FG++L EI
Sbjct: 186 TAHAGAKFPIKWTA-PESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 120/291 (41%), Gaps = 41/291 (14%)
Query: 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIEL 526
SL++ E + +G G G++Y G K + VA++ LK + F+ +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 60
Query: 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LT 581
+ +++H +LV LG C + ++I E++ G L ++ E + + L
Sbjct: 61 MKEIKHPNLVQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
+IS+A+ + F+H +L + L+ +N + K++ + L L
Sbjct: 114 MATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTF 164
Query: 642 VGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698
H P + P + A K K D++ FG++L EI + +D +Q+
Sbjct: 165 TAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID--PSQVY 220
Query: 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
++ D R P E + +M C + NP++RPS ++
Sbjct: 221 ELLEKDYRMERPEGCP--------EKVYELMRACWQW---NPSDRPSFAEI 260
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 72
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLTWTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H + I A A+G+ +LH
Sbjct: 73 -----STAPQLAIVTQWCEGSSLYH-----HLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++L KI + L + SGSI +
Sbjct: 123 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 662 LEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++K D+Y FG++L E++ G+ S + N+ Q + R + P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPD 230
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERP +L +++ A+
Sbjct: 231 LSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 120/291 (41%), Gaps = 41/291 (14%)
Query: 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCLKMKKCHSTRNFMHHIEL 526
SL++ E + +G G G++Y G K + VA++ LK + F+ +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 60
Query: 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-----LT 581
+ +++H +LV LG C + ++I E++ G L ++ E + + L
Sbjct: 61 MKEIKHPNLVQLLGVC-------TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
+IS+A+ + F+H +L + L+ +N + K++ + L L
Sbjct: 114 MATQISSAMEYLEKKNFIH---------RDLAARNCLVGENHLVKVADFGLSRLMTGDTX 164
Query: 642 VGHV---IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698
H P + P + A K K D++ FG++L EI + +D +Q+
Sbjct: 165 TAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID--PSQVY 220
Query: 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
++ D R P E + +M C + NP++RPS ++
Sbjct: 221 ELLEKDYRMERPEGCP--------EKVYELMRACWQW---NPSDRPSFAEI 260
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 93
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
Y+P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 94 YLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 148
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 149 NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 677 EIIV 680
E+
Sbjct: 209 ELFT 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 32/230 (13%)
Query: 463 AYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-ST 517
A R+F+ E+E + +G G G++ GRL+ VAI+ LK
Sbjct: 38 AGRSFT-REIE--ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR 94
Query: 518 RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR---IFLIFEYVPNGTLRSWISEG 574
R+F+ ++ + H +++ G V+R ++ EY+ NG+L +++
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEG----------VVTRGRLAMIVTEYMENGSLDTFLRT- 143
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634
H Q T Q + GV G+++L G +L ++L+D NLV K+S + L
Sbjct: 144 HDGQ-FTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 635 LAEN-----AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII 679
+ E+ G IP + P A D++ FG+++ E++
Sbjct: 200 VLEDDPDAAXTTTGGKIPIRWTA-PEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 119/274 (43%), Gaps = 37/274 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHC 542
+ E G++++GR + G + ++ LK++ +R+F + H +++ LG C
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
LI + P G+L + + EG + + +Q + A+ A+G FLHT
Sbjct: 77 -----QSPPAPHPTLITHWXPYGSLYNVLHEG-TNFVVDQSQAVKFALDXARGXAFLHT- 129
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSAR 659
+ P + + L + +D++ A+IS ++ ++ + V P + P ++ R
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNR 189
Query: 660 GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV---DLLKNQLQAVVTADESARRSMVDPAV 716
D + F ++L E++ +EV DL ++ V + R + P +
Sbjct: 190 ----RSADXWSFAVLLWELVT-------REVPFADLSNXEIGXKVALE--GLRPTIPPGI 236
Query: 717 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ + + ++C ++PA+RP + ++
Sbjct: 237 SP-----HVSKLXKICXN---EDPAKRPKFDXIV 262
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 77
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLTWTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H + I A A+G+ +LH
Sbjct: 78 -----STKPQLAIVTQWCEGSSLYH-----HLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++L KI + L + SGSI +
Sbjct: 128 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 662 LEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++K D+Y FG++L E++ G+ S + N+ Q + R + P
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPD 235
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERP +L +++ A+
Sbjct: 236 LSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 72
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLTWTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H + I A A+G+ +LH
Sbjct: 73 -----STKPQLAIVTQWCEGSSLYH-----HLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++L KI + L + SGSI +
Sbjct: 123 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 662 LEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++K D+Y FG++L E++ G+ S + N+ Q + R + P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPD 230
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERP +L +++ A+
Sbjct: 231 LSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSAL 539
+G G G++ RGRLK + VAI+ LK R F+ ++ + H +++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G ++ + ++ E++ NG L S++ T Q + G+A G+++L
Sbjct: 82 GVV-------TNSMPVMILTEFMENGALDSFLRLNDGQ--FTVIQLVGMLRGIASGMRYL 132
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSID----- 653
+L +IL++ NLV K+S + L L EN+ + G I
Sbjct: 133 AEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII 679
P A K D + +G+++ E++
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 74
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLTWTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H + I A A+G+ +LH
Sbjct: 75 -----STKPQLAIVTQWCEGSSLYH-----HLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++L KI + L + SGSI +
Sbjct: 125 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 662 LEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++K D+Y FG++L E++ G+ S + N+ Q + R + P
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPD 232
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERP +L +++ A+
Sbjct: 233 LSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 274
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 120/303 (39%), Gaps = 35/303 (11%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHI 524
R S ++ E +G GS G +Y+G+ V + + + F + +
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 82
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLT 581
++ K RH +++ +G+ S+ ++ ++ ++ +L H H
Sbjct: 83 GVLRKTRHVNILLFMGY--------STKPQLAIVTQWCEGSSLYH-----HLHIIETKFE 129
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
+ I A A+G+ +LH + +LK +I L ++L KI + L +
Sbjct: 130 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 642 VGHVIPYSGSIDPTNSARGKLEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKN 695
SGSI ++++K D+Y FG++L E++ G+ S + N
Sbjct: 187 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INN 241
Query: 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755
+ Q + R + P ++K K M + CL K ERP +L +++
Sbjct: 242 RDQIIFMVG----RGYLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 296
Query: 756 AAQ 758
A+
Sbjct: 297 LAR 299
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 120/303 (39%), Gaps = 35/303 (11%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHI 524
R S ++ E +G GS G +Y+G+ V + + + F + +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLT 581
++ K RH +++ +G+ S+ ++ ++ ++ +L H H
Sbjct: 84 GVLRKTRHVNILLFMGY--------STKPQLAIVTQWCEGSSLYH-----HLHIIETKFE 130
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
+ I A A+G+ +LH + +LK +I L ++L KI + L +
Sbjct: 131 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 642 VGHVIPYSGSIDPTNSARGKLEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKN 695
SGSI ++++K D+Y FG++L E++ G+ S + N
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INN 242
Query: 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755
+ Q + R + P ++K K M + CL K ERP +L +++
Sbjct: 243 RDQIIFMVG----RGYLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 297
Query: 756 AAQ 758
A+
Sbjct: 298 LAR 300
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 32/230 (13%)
Query: 463 AYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-ST 517
A R+F+ E+E + +G G G++ GRL+ VAI+ LK
Sbjct: 38 AGRSFT-REIE--ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR 94
Query: 518 RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR---IFLIFEYVPNGTLRSWISEG 574
R+F+ ++ + H +++ G V+R ++ EY+ NG+L +++
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEG----------VVTRGRLAMIVTEYMENGSLDTFLRT- 143
Query: 575 HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634
H Q T Q + GV G+++L G +L ++L+D NLV K+S + L
Sbjct: 144 HDGQ-FTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 635 LAENAEKV-----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII 679
+ E+ G IP + P A D++ FG+++ E++
Sbjct: 200 VLEDDPDAAYTTTGGKIPIRWTA-PEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 501 GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFE 560
G VA++ L+ R+F IE++ L+H ++V G C+ + + LI E
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCY-----SAGRRNLKLIME 96
Query: 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620
++P G+LR ++ + + + + + + KG+++L T +L +IL++
Sbjct: 97 FLPYGSLREYLQK--HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVE 151
Query: 621 QNLVAKISSYNL-PLLAENAEKVGHVIPYSGSI---DPTNSARGKLEEKIDIYDFGLILL 676
KI + L +L ++ E P I P + K D++ FG++L
Sbjct: 152 NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 677 EIIV 680
E+
Sbjct: 212 ELFT 215
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 77
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLTWTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H + I A A+G+ +LH
Sbjct: 78 -----STKPQLAIVTQWCEGSSLYH-----HLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++L KI + L + SGSI +
Sbjct: 128 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 662 LEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++K D+Y FG++L E++ G+ S + N+ Q + R + P
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPD 235
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERP +L +++ A+
Sbjct: 236 LSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G + G+ + VAI+ +K + S F+ +++ L H LV G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-- 73
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEG----HAHQSLTWTQRISAAIGVAKGIQFLH 600
+ IF+I EY+ NG L +++ E Q L + + A+ + QFLH
Sbjct: 74 -----TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 128
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSIDPTNS 657
+L + L++ V K+S + L L E G P S P
Sbjct: 129 ---------RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS-PPEVL 178
Query: 658 ARGKLEEKIDIYDFGLILLEI 678
K K DI+ FG+++ EI
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEI 199
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 470 EELEEATNNFDTS-----AFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-STRN 519
E + E D S +G G G++ RGRLK + VAI+ LK R
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 520 FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS 579
F+ ++ + H +++ G ++ + ++ E++ NG L S++
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVV-------TNSMPVMILTEFMENGALDSFLRLNDGQ-- 114
Query: 580 LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAEN 638
T Q + G+A G+++L +L +IL++ NLV K+S + L L EN
Sbjct: 115 FTVIQLVGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 171
Query: 639 AEKVGHVIPYSGSID-----PTNSARGKLEEKIDIYDFGLILLEII 679
+ G I P A K D + +G+++ E++
Sbjct: 172 SSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 117/283 (41%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 76
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT---WTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H S T + I A A+G+ +LH
Sbjct: 77 -----STKPQLAIVTQWCEGSSLYH-----HLHASETKFEMKKLIDIARQTARGMDYLH- 125
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++ KI + L + SGSI +
Sbjct: 126 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 662 LEE------KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++ + D+Y FG++L E++ G+ S + N+ Q + E R + P
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQII----EMVGRGSLSPD 234
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERPS +L ++ A+
Sbjct: 235 LSK-VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+F +G G GQ+++ + + +G I+ +K + R ++ ++KL H ++V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 537 SALGHCFECY-FDDSSVSR---------IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI 586
G C++ + +D + S+ +F+ E+ GTL WI E + L +
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLAL 125
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI 646
+ KG+ ++H+ + + +LK ++I L KI + L +N K
Sbjct: 126 ELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK 182
Query: 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706
+ P + +++D+Y GLIL E+ L TA E+
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAEL------------------LHVCDTAFET 224
Query: 707 AR--RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL 753
++ + D ++ D+ KT+++ + L K P +RP+ ++L L
Sbjct: 225 SKFFTDLRDGIIS-DIFDKKEKTLLQ---KLLSKKPEDRPNTSEILRTL 269
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 470 EELEEATNNFDTSAF--------MGEGSQGQ-MYRGRLKNGTFVAIRCLKMK---KCHST 517
E+ ++ +NN D +G+GS G+ M R AI+ LK +
Sbjct: 4 EDRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDV 63
Query: 518 RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH 577
M +++ L ++ L CF+ +V R++ + EYV G L I +
Sbjct: 64 ECTMVEKRVLALLDKPPFLTQLHSCFQ------TVDRLYFVMEYVNGGDLMYHIQQVGKF 117
Query: 578 QSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
+ Q + A ++ G+ FLH G+ +LK+ +++LD KI+ + + E
Sbjct: 118 KE---PQAVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFG--MCKE 169
Query: 638 NAEKVGHVIPYSGSID---PTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694
+ + G+ D P A + +D + +G++L E++ G+P ++ D L
Sbjct: 170 HMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL- 228
Query: 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
Q+++ + S +S+ AV+ +C + K+PA+R
Sbjct: 229 --FQSIMEHNVSYPKSLSKEAVS-------------ICKGLMTKHPAKR 262
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 17/186 (9%)
Query: 500 NGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
G VA++ LK R+ + IE++ L H H+V G C +D + L+
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCC-----EDQGEKSVQLV 91
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EYVP G+LR ++ + Q + A + +G+ +LH L ++L
Sbjct: 92 MEYVPLGSLRDYLPR----HCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVL 144
Query: 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS----IDPTNSARGKLEEKIDIYDFGLI 674
LD + + KI + L + V S P K D++ FG+
Sbjct: 145 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 204
Query: 675 LLEIIV 680
L E++
Sbjct: 205 LYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 17/186 (9%)
Query: 500 NGTFVAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558
G VA++ LK R+ + IE++ L H H+V G C +D + L+
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCC-----EDQGEKSVQLV 90
Query: 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618
EYVP G+LR ++ + Q + A + +G+ +LH L ++L
Sbjct: 91 MEYVPLGSLRDYLPR----HCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVL 143
Query: 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS----IDPTNSARGKLEEKIDIYDFGLI 674
LD + + KI + L + V S P K D++ FG+
Sbjct: 144 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 203
Query: 675 LLEIIV 680
L E++
Sbjct: 204 LYELLT 209
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 35/224 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G N VAI+ ++ + S +F+ E++ KL H LV G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR--------ISAAIGVAKGI 596
+ I L+FE++ +G L ++ TQR + + V +G+
Sbjct: 74 -------QAPICLVFEFMEHGCLSDYLR----------TQRGLFAAETLLGMCLDVCEGM 116
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSID 653
+L V +L + L+ +N V K+S + + L + G P +
Sbjct: 117 AYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA-S 172
Query: 654 PTNSARGKLEEKIDIYDFGLILLEIIV-GR-PLKSRKEVDLLKN 695
P + + K D++ FG+++ E+ G+ P ++R +++++
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 216
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH 534
++F+ A +G+G+ GQ+ + R + + AI+ ++ + + + L++ L H++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 535 LVSALGHCFEC------YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT--WT--Q 584
+V E S +F+ EY NGTL I + +Q W +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 585 RISAAIGVAKGIQFLHTGIVP-GVF---SNNLKITDILLDQNL-----VAKISSYNLPLL 635
+I A+ +H + P +F S N+KI D L +N+ + K+ S NLP
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 636 AENAEKVGHVIPYSGS--IDPTNSARGKLEEKIDIYDFGLILLEII 679
++N Y + +D T G EKID+Y G+I E+I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGT----GHYNEKIDMYSLGIIFFEMI 225
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 33/206 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G N VAI+ ++ + S +F+ E++ KL H LV G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR--------ISAAIGVAKGI 596
+ I L+FE++ +G L ++ TQR + + V +G+
Sbjct: 74 -------QAPICLVFEFMEHGCLSDYLR----------TQRGLFAAETLLGMCLDVCEGM 116
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSID 653
+L V +L + L+ +N V K+S + + L + G P +
Sbjct: 117 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA-S 172
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII 679
P + + K D++ FG+++ E+
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 33/206 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G N VAI+ ++ + S +F+ E++ KL H LV G C E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR--------ISAAIGVAKGI 596
+ I L+FE++ +G L ++ TQR + + V +G+
Sbjct: 72 -------QAPICLVFEFMEHGCLSDYLR----------TQRGLFAAETLLGMCLDVCEGM 114
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSID 653
+L V +L + L+ +N V K+S + + L + G P +
Sbjct: 115 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA-S 170
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII 679
P + + K D++ FG+++ E+
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVLMWEVF 196
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 48/320 (15%)
Query: 463 AYRTFSLEELEEAT-NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCL-KMKKC 514
A +T S+ +L+E N +G G+ G++Y G++ + VA++ L ++
Sbjct: 16 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 75
Query: 515 HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG 574
+F+ +ISKL H+++V +G + S+ R F++ E + G L+S++ E
Sbjct: 76 QDELDFLMEALIISKLNHQNIVRCIGVSLQ------SLPR-FILLELMAGGDLKSFLRET 128
Query: 575 HAH----QSLTWTQRISAAIGVAKGIQFLHTG--IVPGVFSNNLKITDILLDQNLVAKIS 628
SL + A +A G Q+L I + + N +T VAKI
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT--CPGPGRVAKIG 186
Query: 629 SYNLP---LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII----VG 681
+ + A K G + + P G K D + FG++L EI +
Sbjct: 187 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
Query: 682 RPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA 741
P KS +EV L+ V + +DP N C + M +C P
Sbjct: 247 YPSKSNQEV------LEFVTSG------GRMDPPKN--CPGPVYRIM----TQCWQHQPE 288
Query: 742 ERPSVEDVLWNLQFAAQVQD 761
+RP+ +L +++ Q D
Sbjct: 289 DRPNFAIILERIEYCTQDPD 308
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 114/283 (40%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 72
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLTWTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H + I A A+G+ +LH
Sbjct: 73 -----STKPQLAIVTQWCEGSSLYH-----HLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++L KI + L SGSI +
Sbjct: 123 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 662 LEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++K D+Y FG++L E++ G+ S + N+ Q + R + P
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPD 230
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERP +L +++ A+
Sbjct: 231 LSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 485 MGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHLVSAL 539
+G G G++ G LK FVAI+ LK R +F+ ++ + H +++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G + + + +I E++ NG+L S++ + T Q + G+A G+++L
Sbjct: 75 GVV-------TKSTPVMIITEFMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYL 125
Query: 600 HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAEN-------AEKVGHVIPYSGSI 652
L +IL++ NLV K+S + L E+ +G IP +
Sbjct: 126 AD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEII 679
P K D++ +G+++ E++
Sbjct: 183 -PEAIQYRKFTSASDVWSYGIVMWEVM 208
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 33/206 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G N VAI+ +K + S +F+ E++ KL H LV G C E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR--------ISAAIGVAKGI 596
+ I L+FE++ +G L ++ TQR + + V +G+
Sbjct: 94 -------QAPICLVFEFMEHGCLSDYLR----------TQRGLFAAETLLGMCLDVCEGM 136
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSID 653
+L V +L + L+ +N V K+S + + L + G P +
Sbjct: 137 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA-S 192
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII 679
P + + K D++ FG+++ E+
Sbjct: 193 PEVFSFSRYSSKSDVWSFGVLMWEVF 218
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 35/303 (11%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHI 524
R S ++ E +G GS G +Y+G+ V + + + F + +
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 75
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLT 581
++ K RH +++ +G+ S+ ++ ++ ++ +L H H
Sbjct: 76 GVLRKTRHVNILLFMGY--------STKPQLAIVTQWCEGSSLYH-----HLHIIETKFE 122
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
+ I A A+G+ +LH + +LK +I L ++L KI + L
Sbjct: 123 MIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 179
Query: 642 VGHVIPYSGSIDPTNSARGKLEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKN 695
SGSI ++++K D+Y FG++L E++ G+ S + N
Sbjct: 180 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INN 234
Query: 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755
+ Q + R + P ++K K M + CL K ERP +L +++
Sbjct: 235 RDQIIFMVG----RGYLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 289
Query: 756 AAQ 758
A+
Sbjct: 290 LAR 292
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 33/206 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G N VAI+ ++ + S +F+ E++ KL H LV G C E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR--------ISAAIGVAKGI 596
+ I L+FE++ +G L ++ TQR + + V +G+
Sbjct: 77 -------QAPICLVFEFMEHGCLSDYLR----------TQRGLFAAETLLGMCLDVCEGM 119
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSID 653
+L V +L + L+ +N V K+S + + L + G P +
Sbjct: 120 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA-S 175
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII 679
P + + K D++ FG+++ E+
Sbjct: 176 PEVFSFSRYSSKSDVWSFGVLMWEVF 201
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 48/320 (15%)
Query: 463 AYRTFSLEELEEAT-NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCL-KMKKC 514
A +T S+ +L+E N +G G+ G++Y G++ + VA++ L ++
Sbjct: 30 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 89
Query: 515 HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG 574
+F+ +ISKL H+++V +G + S+ R F++ E + G L+S++ E
Sbjct: 90 QDELDFLMEALIISKLNHQNIVRCIGVSLQ------SLPR-FILLELMAGGDLKSFLRET 142
Query: 575 HAH----QSLTWTQRISAAIGVAKGIQFLHTG--IVPGVFSNNLKITDILLDQNLVAKIS 628
SL + A +A G Q+L I + + N +T VAKI
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT--CPGPGRVAKIG 200
Query: 629 SYNLP---LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII----VG 681
+ + A K G + + P G K D + FG++L EI +
Sbjct: 201 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
Query: 682 RPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA 741
P KS +EV L+ V + +DP N C + M +C P
Sbjct: 261 YPSKSNQEV------LEFVTSG------GRMDPPKN--CPGPVYRIM----TQCWQHQPE 302
Query: 742 ERPSVEDVLWNLQFAAQVQD 761
+RP+ +L +++ Q D
Sbjct: 303 DRPNFAIILERIEYCTQDPD 322
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 35/303 (11%)
Query: 465 RTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHI 524
R S ++ E +G GS G +Y+G+ V + + + F + +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAH---QSLT 581
++ K RH +++ +G+ S+ ++ ++ ++ +L H H
Sbjct: 84 GVLRKTRHVNILLFMGY--------STKPQLAIVTQWCEGSSLYH-----HLHIIETKFE 130
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK 641
+ I A A+G+ +LH + +LK +I L ++L KI + L
Sbjct: 131 MIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 642 VGHVIPYSGSIDPTNSARGKLEEK------IDIYDFGLILLEIIVGRPLKSRKEVDLLKN 695
SGSI ++++K D+Y FG++L E++ G+ S + N
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INN 242
Query: 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755
+ Q + R + P ++K K M + CL K ERP +L +++
Sbjct: 243 RDQIIFMVG----RGYLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 297
Query: 756 AAQ 758
A+
Sbjct: 298 LAR 300
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 88
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT---WTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H S T + I A A+G+ +LH
Sbjct: 89 -----STAPQLAIVTQWCEGSSLYH-----HLHASETKFEMKKLIDIARQTARGMDYLH- 137
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++ KI + L SGSI +
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 662 LEE------KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++ + D+Y FG++L E++ G+ S + N+ Q + E R + P
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQII----EMVGRGSLSPD 246
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERPS +L ++ A+
Sbjct: 247 LSK-VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFS 609
S S +FL+F+ + G L +++E A L+ + S + + + FLH +
Sbjct: 170 ESSSFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEAVSFLHAN---NIVH 223
Query: 610 NNLKITDILLDQNLVAKISSYNLPLLAENAEKV-------GHVIP--YSGSIDPTNSARG 660
+LK +ILLD N+ ++S + E EK+ G++ P S+D T+ G
Sbjct: 224 RDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYG 283
Query: 661 KLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLK 694
K ++D++ G+IL ++ G P R+++ +L+
Sbjct: 284 K---EVDLWACGVILFTLLAGSPPFWHRRQILMLR 315
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 35/283 (12%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G GS G +Y+G+ V + + + F + + ++ K RH +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 88
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT---WTQRISAAIGVAKGIQFLHT 601
S+ ++ ++ ++ +L H H S T + I A A+G+ +LH
Sbjct: 89 -----STKPQLAIVTQWCEGSSLYH-----HLHASETKFEMKKLIDIARQTARGMDYLH- 137
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGK 661
+ +LK +I L ++ KI + L SGSI +
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 662 LEE------KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715
+++ + D+Y FG++L E++ G+ S + N+ Q + E R + P
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQII----EMVGRGSLSPD 246
Query: 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758
++K K M + CL K ERPS +L ++ A+
Sbjct: 247 LSK-VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 28/216 (12%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTF-VAIRCL---KMKKCHSTRNFMHHIELISKLRH 532
++F+ +G+G G +Y R K F VA++ L +++K IE+ + L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI-- 590
+++ YF D RI+LI EY P G L + +S T+ ++ +A I
Sbjct: 83 PNILRLYN-----YFYDRR--RIYLILEYAPRGELYKELQ-----KSCTFDEQRTATIME 130
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSG 650
+A + + H V ++K ++LL KI+ + + A + + G
Sbjct: 131 ELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT----MCG 183
Query: 651 SID--PTNSARGKLE-EKIDIYDFGLILLEIIVGRP 683
++D P G++ EK+D++ G++ E++VG P
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNP 219
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G +Y + G VAIR + +++ ++ I ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 544 ECYFDDSSV-SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
Y D V ++++ EY+ G+L ++E + Q + + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 135
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNL-----PLLAENAEKVGHVIPYSGSIDPTNS 657
V ++K +ILL + K++ + P ++ +E VG PY + P
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVG--TPYW--MAPEVV 188
Query: 658 ARGKLEEKIDIYDFGLILLEIIVGRP 683
R K+DI+ G++ +E+I G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 45/288 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++RG + G VA++ + +++ EL + + RH + LG
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSR---DEKSWFRETELYNTVMLRH-ENILGFIAS 99
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
S ++++LI Y G+L ++ +L + + +A G+ LH I
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 605 -----PGVFSNNLKITDILLDQNLVAKISSYNLPLLAE---------NAEKVG------- 643
P + +LK +IL+ +N I+ L ++ N +VG
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 644 HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703
V+ + +D +S + ++DI+ FGL+L E V R + S V+ K VV
Sbjct: 216 EVLDETIQVDCFDSYK-----RVDIWAFGLVLWE--VARRMVSNGIVEDYKPPFYDVVPN 268
Query: 704 D---ESARRSM-VD---PAV-NKACLDESLKTMMEVCVRCLLKNPAER 743
D E R+ + VD P + N+ D +L ++ ++ C +NP+ R
Sbjct: 269 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH 534
++F+ A +G+G+ GQ+ + R + + AI+ ++ + + + L++ L H++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 535 LVSALGHCFEC------YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT--WT--Q 584
+V E S +F+ EY N TL I + +Q W +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 585 RISAAIGVAKGIQFLHTGIVP-GVF---SNNLKITDILLDQNL-----VAKISSYNLPLL 635
+I A+ +H + P +F S N+KI D L +N+ + K+ S NLP
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 636 AENAEKVGHVIPYSGS--IDPTNSARGKLEEKIDIYDFGLILLEII 679
++N Y + +D T G EKID+Y G+I E+I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGT----GHYNEKIDMYSLGIIFFEMI 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 45/288 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++RG + G VA++ + +++ EL + + RH + LG
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSR---DEKSWFRETELYNTVMLRH-ENILGFIAS 70
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
S ++++LI Y G+L ++ +L + + +A G+ LH I
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 605 -----PGVFSNNLKITDILLDQNLVAKISSYNLPLLAE---------NAEKVG------- 643
P + +LK +IL+ +N I+ L ++ N +VG
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 644 HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703
V+ + +D +S + ++DI+ FGL+L E V R + S V+ K VV
Sbjct: 187 EVLDETIQVDCFDSYK-----RVDIWAFGLVLWE--VARRMVSNGIVEDYKPPFYDVVPN 239
Query: 704 D---ESARRSM-VD---PAV-NKACLDESLKTMMEVCVRCLLKNPAER 743
D E R+ + VD P + N+ D +L ++ ++ C +NP+ R
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 131/336 (38%), Gaps = 71/336 (21%)
Query: 458 ALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYR-------GRLKNGTFVAIRCLK 510
+L + A++ + E N +GEG G++ + GR T VA++ LK
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLK 62
Query: 511 MKKCHST-RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRS 569
S R+ + ++ ++ H H++ G C S + LI EY G+LR
Sbjct: 63 ENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-------SQDGPLLLIVEYAKYGSLRG 115
Query: 570 WISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608
++ E ++LT IS A +++G+Q+L +
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172
Query: 609 SNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKI-- 666
+L +IL+ + KIS + L + E+ +V G I A L + I
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 667 ---DIYDFGLILLEIIV--GRP---LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718
D++ FG++L EI+ G P + + +LLK M P
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG------------HRMERP---D 275
Query: 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
C +E + M++ C + P +RP D+ +L+
Sbjct: 276 NCSEEMYRLMLQ----CWKQEPDKRPVFADISKDLE 307
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 26/238 (10%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMK---KCHSTRNFMHHIELISKL 530
+NF+ +G+GS G++ R+K G A++ LK + M ++S
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI 590
R+ ++ L CF+ + R+F + E+V G L I + R AA
Sbjct: 81 RNHPFLTQLFCCFQ------TPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR--ARFYAA- 131
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSG 650
+ + FLH G+ +LK+ ++LLD K++ + + E + G
Sbjct: 132 EIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFG--MCKEGICNGVTTATFCG 186
Query: 651 SIDPTNSARGKLEE-----KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVT 702
+ P A L+E +D + G++L E++ G P ++ E DL + L V
Sbjct: 187 T--PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV 242
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 33/206 (16%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G G G ++ G N VAI+ ++ + S +F+ E++ KL H LV G C E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR--------ISAAIGVAKGI 596
+ I L+ E++ +G L ++ TQR + + V +G+
Sbjct: 75 -------QAPICLVTEFMEHGCLSDYLR----------TQRGLFAAETLLGMCLDVCEGM 117
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP---LLAENAEKVGHVIPYSGSID 653
+L V +L + L+ +N V K+S + + L + G P +
Sbjct: 118 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA-S 173
Query: 654 PTNSARGKLEEKIDIYDFGLILLEII 679
P + + K D++ FG+++ E+
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVLMWEVF 199
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
D+ +GEGS G + R K+ G VA++ + ++K + + ++ +H ++V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVV- 105
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
E Y ++++ E++ G L +S+ ++ Q + V + +
Sbjct: 106 ------EMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE----QIATVCEAVLQALA 155
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYSGSIDPTN 656
+LH GV ++K ILL + K+S + ++++ K ++ + P
Sbjct: 156 YLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEV 212
Query: 657 SARGKLEEKIDIYDFGLILLEIIVGRP 683
+R ++DI+ G++++E++ G P
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEP 239
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 45/288 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++RG + G VA++ + +++ EL + + RH + LG
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSR---DEKSWFRETELYNTVMLRH-ENILGFIAS 70
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
S ++++LI Y G+L ++ +L + + +A G+ LH I
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 605 -----PGVFSNNLKITDILLDQNLVAKISSYNLPLLAE---------NAEKVG------- 643
P + +LK +IL+ +N I+ L ++ N +VG
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 644 HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703
V+ + +D +S + ++DI+ FGL+L E V R + S V+ K VV
Sbjct: 187 EVLDETIQVDCFDSYK-----RVDIWAFGLVLWE--VARRMVSNGIVEDYKPPFYDVVPN 239
Query: 704 D---ESARRSM-VD---PAV-NKACLDESLKTMMEVCVRCLLKNPAER 743
D E R+ + VD P + N+ D +L ++ ++ C +NP+ R
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G +Y + G VAIR + +++ ++ I ++ + ++ ++V+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 82
Query: 544 ECYFDDSSV-SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
Y D V ++++ EY+ G+L ++E + Q + + ++FLH+
Sbjct: 83 --YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 136
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNL-----PLLAENAEKVGHVIPYSGSIDPTNS 657
V N+K +ILL + K++ + P ++ + VG PY + P
Sbjct: 137 ---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG--TPYW--MAPEVV 189
Query: 658 ARGKLEEKIDIYDFGLILLEIIVGRP 683
R K+DI+ G++ +E+I G P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEP 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 119/302 (39%), Gaps = 57/302 (18%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+F +G G GQ+++ + + +G IR +K + R ++ ++KL H ++V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 537 SALGHCFECYFDDSSVSR-----------------------IFLIFEYVPNGTLRSWISE 573
G C++ + D S +F+ E+ GTL WI E
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-E 126
Query: 574 GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633
+ L + + KG+ ++H+ + +LK ++I L KI + L
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL 693
+N K + P + +++D+Y GLIL E+
Sbjct: 184 TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL--------------- 228
Query: 694 KNQLQAVVTADESAR--RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLW 751
L TA E+++ + D ++ D+ KT+++ + L K P +RP+ ++L
Sbjct: 229 ---LHVCDTAFETSKFFTDLRDGIIS-DIFDKKEKTLLQ---KLLSKKPEDRPNTSEILR 281
Query: 752 NL 753
L
Sbjct: 282 TL 283
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH 534
++F+ A +G+G+ GQ+ + R + + AI+ ++ + + + L++ L H++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNHQY 63
Query: 535 LVSALGHCFE--CYFDDSSV----SRIFLIFEYVPNGTLRSWISEGHAHQSLT--WT--Q 584
+V E + + S +F+ EY N TL I + +Q W +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 585 RISAAIGVAKGIQFLHTGIVP-GVF---SNNLKITDILLDQNL-----VAKISSYNLPLL 635
+I A+ +H + P +F S N+KI D L +N+ + K+ S NLP
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 636 AENAEKVGHVIPYSGS--IDPTNSARGKLEEKIDIYDFGLILLEII 679
++N Y + +D T G EKID Y G+I E I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGT----GHYNEKIDXYSLGIIFFEXI 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 42/228 (18%)
Query: 474 EATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCL------KMKKCHSTRNFMHHIEL 526
++ ++ +GEGS G + + R K+ G VAI+ KM K + M I+L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK----KIAMREIKL 77
Query: 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW--ISEGHAHQSLTWTQ 584
+ +LRH +LV+ L C R +L+FE+V + L G +Q +
Sbjct: 78 LKQLRHENLVNLLEVC-------KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ--- 127
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGH 644
+ GI F H+ + ++K +IL+ Q+ V K+ + A G
Sbjct: 128 --KYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF---ARTLAAPGE 179
Query: 645 VIPYSGSIDPTNSARG--------KLEEKIDIYDFGLILLEIIVGRPL 684
V Y + T R K + +D++ G ++ E+ +G PL
Sbjct: 180 V--YDDEV-ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 129/336 (38%), Gaps = 71/336 (21%)
Query: 458 ALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYR-------GRLKNGTFVAIRCLK 510
+L + A++ + E N +GEG G++ + GR T VA++ LK
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLK 62
Query: 511 MKKCHST-RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRS 569
S R+ + ++ ++ H H++ G C S + LI EY G+LR
Sbjct: 63 ENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-------SQDGPLLLIVEYAKYGSLRG 115
Query: 570 WISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608
++ E ++LT IS A +++G+Q+L +
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSLV 172
Query: 609 SNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKI-- 666
+L +IL+ + KIS + L + E+ V G I A L + I
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 667 ---DIYDFGLILLEIIV--GRP---LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718
D++ FG++L EI+ G P + + +LLK M P
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG------------HRMERP---- 274
Query: 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
D + M + ++C + P +RP D+ +L+
Sbjct: 275 ---DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 108/277 (38%), Gaps = 31/277 (11%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR---NFMHHIELISKLR 531
++ ++ +G G +++ R L++ VA++ L+ F + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 532 HRHLVSALGHCFECYFDDSSVSRI-FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI 590
H +V+ ++ ++ + +++ EYV TLR + H +T + I
Sbjct: 71 HPAIVA----VYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIA 123
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKV---GHVI 646
+ + F H G+ ++K +I++ K+ + + +A++ V VI
Sbjct: 124 DACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706
+ + P + ++ + D+Y G +L E++ G P + D + Q
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQ---------H 231
Query: 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
R + P+ L L V ++ L KNP R
Sbjct: 232 VREDPIPPSARHEGLSADLDA---VVLKALAKNPENR 265
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
D +GEGS G + +++ G VA++ + ++K + + ++ +H ++V
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV- 91
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
E Y ++++ E++ G L ++ H + Q + + V + +
Sbjct: 92 ------EMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIAAVCLAVLQALS 141
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDP 654
LH GV ++K ILL + K+S + A+ +++V G+ + P
Sbjct: 142 VLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAP 196
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRP 683
+R ++DI+ G++++E++ G P
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDGEP 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
D +GEGS G + +++ G VA++ + ++K + + ++ +H ++V
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV- 89
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
E Y ++++ E++ G L ++ H + Q + + V + +
Sbjct: 90 ------EMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIAAVCLAVLQALS 139
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDP 654
LH GV ++K ILL + K+S + A+ +++V G+ + P
Sbjct: 140 VLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAP 194
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRP 683
+R ++DI+ G++++E++ G P
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDGEP 223
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 130/336 (38%), Gaps = 71/336 (21%)
Query: 458 ALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYR-------GRLKNGTFVAIRCLK 510
+L + A++ + E N +GEG G++ + GR T VA++ LK
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLK 62
Query: 511 MKKCHST-RNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRS 569
S R+ + ++ ++ H H++ G C S + LI EY G+LR
Sbjct: 63 ENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-------SQDGPLLLIVEYAKYGSLRG 115
Query: 570 WISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608
++ E ++LT IS A +++G+Q+L +
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172
Query: 609 SNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKI-- 666
+L +IL+ + KIS + L + E+ V G I A L + I
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 667 ---DIYDFGLILLEIIV--GRP---LKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718
D++ FG++L EI+ G P + + +LLK M P
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG------------HRMERP---D 275
Query: 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754
C +E + M++ C + P +RP D+ +L+
Sbjct: 276 NCSEEMYRLMLQ----CWKQEPDKRPVFADISKDLE 307
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G +Y + G VAIR + +++ ++ I ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 544 ECYFDDSSV-SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
Y D V ++++ EY+ G+L ++E + Q + + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 135
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNL-----PLLAENAEKVGHVIPYSGSIDPTNS 657
V ++K +ILL + K++ + P ++ + VG PY + P
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVG--TPYW--MAPEVV 188
Query: 658 ARGKLEEKIDIYDFGLILLEIIVGRP 683
R K+DI+ G++ +E+I G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
D +GEGS G + +++ G VA++ + ++K + + ++ +H ++V
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV- 80
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
E Y ++++ E++ G L ++ H + Q + + V + +
Sbjct: 81 ------EMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIAAVCLAVLQALS 130
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDP 654
LH GV ++K ILL + K+S + A+ +++V G+ + P
Sbjct: 131 VLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAP 185
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRP 683
+R ++DI+ G++++E++ G P
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEP 214
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 125/301 (41%), Gaps = 35/301 (11%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++ G+ + G VA++ + S + E+ + RH + LG
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEAS---WFRETEIYQTVLMRH-ENILGFIAA 99
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIV 604
S ++++LI +Y NG+L ++ +L + A G+ LHT I
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 605 -----PGVFSNNLKITDILLDQNLVAKISSYNLPL--LAENAE-------KVGHVIPYSG 650
P + +LK +IL+ +N I+ L + +++ E +VG
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 651 SIDPTNSARGKLEEKI--DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708
+ + R + I D+Y FGLIL E V R S V+ + +V +D S
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWE--VARRCVSGGIVEEYQLPYHDLVPSDPSYE 273
Query: 709 --RSMV-----DPAV-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760
R +V P+ N+ DE L+ M ++ C NPA R + V L ++ Q
Sbjct: 274 DMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333
Query: 761 D 761
D
Sbjct: 334 D 334
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G +Y + G VAIR + +++ ++ I ++ + ++ ++V+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 82
Query: 544 ECYFDDSSV-SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
Y D V ++++ EY+ G+L ++E + Q + + ++FLH+
Sbjct: 83 --YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 136
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNL-----PLLAENAEKVGHVIPYSGSIDPTNS 657
V ++K +ILL + K++ + P ++ + VG PY + P
Sbjct: 137 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVG--TPYW--MAPEVV 189
Query: 658 ARGKLEEKIDIYDFGLILLEIIVGRP 683
R K+DI+ G++ +E+I G P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G +Y + G VAIR + +++ ++ I ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 544 ECYFDDSSV-SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG 602
Y D V ++++ EY+ G+L ++E + Q + + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAVCRECLQALEFLHSN 135
Query: 603 IVPGVFSNNLKITDILLDQNLVAKISSYNL-----PLLAENAEKVGHVIPYSGSIDPTNS 657
V ++K +ILL + K++ + P ++ + VG PY + P
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG--TPYW--MAPEVV 188
Query: 658 ARGKLEEKIDIYDFGLILLEIIVGRP 683
R K+DI+ G++ +E+I G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
D +GEGS G + +++ G VA++ + ++K + + ++ +H ++V
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV- 134
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
E Y ++++ E++ G L ++ H + Q + + V + +
Sbjct: 135 ------EMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIAAVCLAVLQALS 184
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDP 654
LH GV ++K ILL + K+S + A+ +++V G+ + P
Sbjct: 185 VLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAP 239
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRP 683
+R ++DI+ G++++E++ G P
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGEP 268
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
D +GEGS G + +++ G VA++ + ++K + + ++ +H ++V
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV- 84
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
E Y ++++ E++ G L ++ H + Q + + V + +
Sbjct: 85 ------EMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIAAVCLAVLQALS 134
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDP 654
LH GV ++K ILL + K+S + A+ +++V G+ + P
Sbjct: 135 VLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAP 189
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRP 683
+R ++DI+ G++++E++ G P
Sbjct: 190 ELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
D +GEGS G + +++ G VA++ + ++K + + ++ +H ++V
Sbjct: 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVV- 211
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
E Y ++++ E++ G L ++ H + Q + + V + +
Sbjct: 212 ------EMYNSYLVGDELWVVMEFLEGGALTDIVT----HTRMNEEQIAAVCLAVLQALS 261
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDP 654
LH GV ++K ILL + K+S + A+ +++V G+ + P
Sbjct: 262 VLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAP 316
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRP 683
+R ++DI+ G++++E++ G P
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGEP 345
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 108/277 (38%), Gaps = 31/277 (11%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR---NFMHHIELISKLR 531
++ ++ +G G +++ R L++ VA++ L+ F + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 532 HRHLVSALGHCFECYFDDSSVSRI-FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI 590
H +V+ ++ ++ + +++ EYV TLR + H +T + I
Sbjct: 71 HPAIVA----VYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIA 123
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGH---VI 646
+ + F H G+ ++K +IL+ K+ + + +A++ V VI
Sbjct: 124 DACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706
+ + P + ++ + D+Y G +L E++ G P + V A +
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD---------SPVSVAYQH 231
Query: 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
R + P+ L L V ++ L KNP R
Sbjct: 232 VREDPIPPSARHEGLSADLDA---VVLKALAKNPENR 265
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 53/292 (18%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFE 544
+G+G G+++RG L +G VA++ + +++ E+ + + RH + LG
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSR---DEQSWFRETEIYNTVLLRH-DNILGFIAS 70
Query: 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK-GIQFLHTGI 603
+S ++++LI Y +G+L ++ L +SAA G+A ++ T
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR---- 659
P + + K ++L+ NL I+ L ++ S +D N+ R
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQG---------SDYLDIGNNPRVGTK 181
Query: 660 -----GKLEEKI-----------DIYDFGLILLEI----IVGRPLKSRKE--VDLLKN-- 695
L+E+I DI+ FGL+L EI IV ++ + D++ N
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDP 241
Query: 696 ---QLQAVVTADESARRSMVDPAV-NKACLDESLKTMMEVCVRCLLKNPAER 743
++ VV D+ P + N+ D L + ++ C NP+ R
Sbjct: 242 SFEDMKKVVCVDQQT------PTIPNRLAADPVLSGLAQMMRECWYPNPSAR 287
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + V + L+ +YVP R A Q+L + + +
Sbjct: 77 R-LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 193 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 704 DESARRSM 711
R M
Sbjct: 243 TREQIREM 250
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 108/277 (38%), Gaps = 31/277 (11%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTR---NFMHHIELISKLR 531
++ ++ +G G +++ R L++ VA++ L+ F + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 532 HRHLVSALGHCFECYFDDSSVSRI-FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI 590
H +V+ ++ ++ + +++ EYV TLR + H +T + I
Sbjct: 71 HPAIVA----VYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIA 123
Query: 591 GVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKV---GHVI 646
+ + F H G+ ++K +I++ K+ + + +A++ V VI
Sbjct: 124 DACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706
+ + P + ++ + D+Y G +L E++ G P + V A +
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD---------SPVSVAYQH 231
Query: 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
R + P+ L L V ++ L KNP R
Sbjct: 232 VREDPIPPSARHEGLSADLDA---VVLKALAKNPENR 265
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALG 540
+G G+ G++ G+ + G VA++ L +K S I+ + RH H++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII---- 79
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
+ Y S+ S IF++ EYV G L +I + ++R+ I G+ + H
Sbjct: 80 ---KLYQVISTPSDIFMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQI--LSGVDYCH 133
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDP-TNSAR 659
+ V +LK ++LLD ++ AKI+ + L + + E + P S R
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGR 190
Query: 660 GKLEEKIDIYDFGLILLEIIVG 681
++DI+ G+IL ++ G
Sbjct: 191 LYAGPEVDIWSSGVILYALLCG 212
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
++ L CF+ ++ R++ + EYV G L I + + + A +A
Sbjct: 82 FLTQLHSCFQ------TMDRLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAI 132
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSID- 653
G+ FL + G+ +LK+ +++LD KI+ + + EN + G+ D
Sbjct: 133 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFG--MCKENIWDGVTTKXFCGTPDY 187
Query: 654 --PTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRS 710
P A + +D + FG++L E++ G+ P + E +L Q+++ + + +S
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEHNVAYPKS 243
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAER 743
M AV +C + K+P +R
Sbjct: 244 MSKEAV-------------AICKGLMTKHPGKR 263
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 22/192 (11%)
Query: 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT 615
+++ EYV TLR + H +T + I + + F H G+ ++K
Sbjct: 109 YIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 162
Query: 616 DILLDQNLVAKISSYNLP-LLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDF 671
+I++ K+ + + +A++ V VI + + P + ++ + D+Y
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 672 GLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
G +L E++ G P + V A + R + P+ L L V
Sbjct: 223 GCVLYEVLTGEPPFTGD---------SPVSVAYQHVREDPIPPSARHEGLSADLDA---V 270
Query: 732 CVRCLLKNPAER 743
++ L KNP R
Sbjct: 271 VLKALAKNPENR 282
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 22/192 (11%)
Query: 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT 615
+++ EYV TLR + H +T + I + + F H G+ ++K
Sbjct: 92 YIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 616 DILLDQNLVAKISSYNLP-LLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDF 671
+I++ K+ + + +A++ V VI + + P + ++ + D+Y
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 672 GLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
G +L E++ G P + V A + R + P+ L L V
Sbjct: 206 GCVLYEVLTGEPPFTGD---------SPVSVAYQHVREDPIPPSARHEGLSADLDA---V 253
Query: 732 CVRCLLKNPAER 743
++ L KNP R
Sbjct: 254 VLKALAKNPENR 265
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
K H I + L H+H+V F +F+D+ +F++ E RS +
Sbjct: 57 KPHQREKMSMEISIHRSLAHQHVVG-----FHGFFEDNDF--VFVVLELC---RRRSLLE 106
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
++LT + + G Q+LH V +LK+ ++ L+++L KI + L
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
E + E+ + I P ++ ++D++ G I+ ++VG+P
Sbjct: 164 ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 113/278 (40%), Gaps = 35/278 (12%)
Query: 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKM--KKCHSTRNFMHHIELISKLRHRHLVSAL 539
S +G GS G +Y+G+ VA++ LK+ + F + + ++ K RH +++ +
Sbjct: 41 STRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQS-LTWTQRISAAIGVAKGIQF 598
G+ + + ++ ++ +L + H ++ Q I A A+G+ +
Sbjct: 99 GYM--------TKDNLAIVTQWCEGSSLYKHL---HVQETKFQMFQLIDIARQTAQGMDY 147
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA 658
LH + ++K +I L + L KI + L + V +GS+
Sbjct: 148 LHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
Query: 659 RGKLEE------KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712
++++ + D+Y +G++L E++ G S + N+ Q + R
Sbjct: 205 VIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH-----INNRDQIIFMVG----RGYA 255
Query: 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
P ++K K M + C+ K ERP +L
Sbjct: 256 SPDLSK-LYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 22/192 (11%)
Query: 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT 615
+++ EYV TLR + H +T + I + + F H G+ ++K
Sbjct: 92 YIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 616 DILLDQNLVAKISSYNLP-LLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDF 671
+I++ K+ + + +A++ V VI + + P + ++ + D+Y
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 672 GLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEV 731
G +L E++ G P + V A + R + P+ L L V
Sbjct: 206 GCVLYEVLTGEPPFTGD---------SPVSVAYQHVREDPIPPSARHEGLSADLDA---V 253
Query: 732 CVRCLLKNPAER 743
++ L KNP R
Sbjct: 254 VLKALAKNPENR 265
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
K H I + L H+H+V F +F+D+ +F++ E RS +
Sbjct: 61 KPHQREKMSMEISIHRSLAHQHVVG-----FHGFFEDNDF--VFVVLELC---RRRSLLE 110
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
++LT + + G Q+LH V +LK+ ++ L+++L KI + L
Sbjct: 111 LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 167
Query: 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
E + E+ + I P ++ ++D++ G I+ ++VG+P
Sbjct: 168 ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
K H I + L H+H+V F +F+D+ +F++ E RS +
Sbjct: 57 KPHQREKMSMEISIHRSLAHQHVVG-----FHGFFEDNDF--VFVVLELC---RRRSLLE 106
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
++LT + + G Q+LH V +LK+ ++ L+++L KI + L
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
E + E+ + I P ++ ++D++ G I+ ++VG+P
Sbjct: 164 ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG++F
Sbjct: 157 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 207
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 208 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 265 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 314
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 315 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
++ L CF+ ++ R++ + EYV G L I + + + A +A
Sbjct: 403 FLTQLHSCFQ------TMDRLYFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAI 453
Query: 595 GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSID- 653
G+ FL + G+ +LK+ +++LD KI+ + + EN + G+ D
Sbjct: 454 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFG--MCKENIWDGVTTKXFCGTPDY 508
Query: 654 --PTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRS 710
P A + +D + FG++L E++ G+ P + E +L ++ ++ V +S +
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKE 568
Query: 711 MV 712
V
Sbjct: 569 AV 570
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 111/280 (39%), Gaps = 41/280 (14%)
Query: 484 FMGEGSQGQMYRGRLKNGTFVAIRCLKMKK----CHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G++YR G VA++ + + N +L + L+H ++++
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL 599
G C + + L+ E+ G L +S + ++ A+ +A+G+ +L
Sbjct: 73 GVCLK-------EPNLCLVMEFARGGPLNRVLSGKRIPPDIL----VNWAVQIARGMNYL 121
Query: 600 HTGIVPGVFSNNLKITDILLDQ--------NLVAKISSYNLPLLAENAEKVGHVIPYSGS 651
H + + +LK ++IL+ Q N + KI+ + L K+ Y+
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAW- 180
Query: 652 IDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRS 710
+ P + D++ +G++L E++ G P + + + A A
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG----------IDGLAVAYGVAMNK 230
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ P + C E +ME C +P RPS ++L
Sbjct: 231 LALP-IPSTC-PEPFAKLMEDCWN---PDPHSRPSFTNIL 265
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG++F
Sbjct: 98 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 148
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 149 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 206 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 255
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 256 LLQP---EYCPDP----LYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
K H I + L H+H+V F +F+D+ +F++ E RS +
Sbjct: 81 KPHQREKMSMEISIHRSLAHQHVVG-----FHGFFEDNDF--VFVVLELC---RRRSLLE 130
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
++LT + + G Q+LH V +LK+ ++ L+++L KI + L
Sbjct: 131 LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 187
Query: 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
E + E+ + I P ++ ++D++ G I+ ++VG+P
Sbjct: 188 ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 485 MGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+G+G+ G +Y GR L N +AI+ + + ++ I L L+H+++V LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS-- 87
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRS-----WISEGHAHQSLTWTQRISAAIGVAKGIQF 598
F ++ +IF+ E VP G+L + W Q++ + + + +G+++
Sbjct: 88 ---FSENGFIKIFM--EQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKY 137
Query: 599 LHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYN----LPLLAENAEKVGHVIPYSGS-- 651
LH + ++K ++L++ + V KIS + L + E + Y
Sbjct: 138 LHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI 194
Query: 652 IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
ID GK DI+ G ++E+ G+P
Sbjct: 195 IDKGPRGYGKA---ADIWSLGCTIIEMATGKP 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
K H I + L H+H+V F +F+D+ +F++ E RS +
Sbjct: 79 KPHQREKMSMEISIHRSLAHQHVVG-----FHGFFEDNDF--VFVVLELC---RRRSLLE 128
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
++LT + + G Q+LH V +LK+ ++ L+++L KI + L
Sbjct: 129 LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 185
Query: 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
E + E+ + I P ++ ++D++ G I+ ++VG+P
Sbjct: 186 ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG++F
Sbjct: 96 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 146
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 147 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 204 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 253
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 254 LLQP---EYCPDP----LYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG++F
Sbjct: 99 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 149
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 150 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 207 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 256
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 257 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG++F
Sbjct: 98 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 148
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 149 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 206 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 255
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 256 LLQP---EYCPDP----LYEVMLKCWHPKAEMRPSFSELV 288
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 41/303 (13%)
Query: 456 LGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC 514
LGA+ P ++ + E+ + +D +G G+ ++ K VAI+C+ +
Sbjct: 2 LGAVEGPRWK-----QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL 56
Query: 515 HSTRNFMHH-IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE 573
M + I ++ K++H ++V AL +E S ++LI + V G L I E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIV-ALDDIYE------SGGHLYLIMQLVSGGELFDRIVE 109
Query: 574 GHAHQSLTWTQRISAAI--GVAKGIQFLHTGIVPGVFSNNLKITDIL---LDQNLVAKIS 628
+T+R ++ + V +++LH G+ +LK ++L LD++ IS
Sbjct: 110 -----KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSR 687
+ L + + + G + P A+ + +D + G+I ++ G P
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+ L + L+A D + D A + ++ +ME K+P +R + E
Sbjct: 222 NDAKLFEQILKAEYEFDSPYWDDISDSAKD------FIRHLME-------KDPEKRFTCE 268
Query: 748 DVL 750
L
Sbjct: 269 QAL 271
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG++F
Sbjct: 103 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 153
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 154 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 211 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 260
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 261 LLQP---EYCPDP----LYEVMLKCWHPKAEMRPSFSELV 293
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 32/228 (14%)
Query: 469 LEELEEATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIELI 527
LE E N D +G+G+ G +Y GR L N +AI+ + + ++ I L
Sbjct: 1 LEYDYEYDENGD-RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALH 59
Query: 528 SKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRS-----WISEGHAHQSLTW 582
L+H+++V LG F ++ +IF+ E VP G+L + W Q++ +
Sbjct: 60 KHLKHKNIVQYLGS-----FSENGFIKIFM--EQVPGGSLSALLRSKWGPLKDNEQTIGF 112
Query: 583 TQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYN----LPLLAE 637
+ + +G+++LH + ++K ++L++ + V KIS + L +
Sbjct: 113 YTK-----QILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 164
Query: 638 NAEKVGHVIPYSGS--IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
E + Y ID GK DI+ G ++E+ G+P
Sbjct: 165 CTETFTGTLQYMAPEIIDKGPRGYGK---AADIWSLGCTIIEMATGKP 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 485 MGEGSQGQMYRGRLK-----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSA 538
+GEG G++ R G VA++ LK + + + IE++ L H ++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C E + I LI E++P+G+L+ ++ + + Q++ A+ + KG+ +
Sbjct: 89 KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDY 141
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS----IDP 654
L + +L ++L++ KI + L E ++ V S P
Sbjct: 142 LGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIV 680
+ K D++ FG+ L E++
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 485 MGEGSQGQMYRGRLK-----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSA 538
+GEG G++ R G VA++ LK + + + IE++ L H ++V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C E + I LI E++P+G+L+ ++ + + Q++ A+ + KG+ +
Sbjct: 77 KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDY 129
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS----IDP 654
L + +L ++L++ KI + L E ++ V S P
Sbjct: 130 LGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIV 680
+ K D++ FG+ L E++
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 41/303 (13%)
Query: 456 LGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC 514
LGA+ P ++ + E+ + +D +G G+ ++ K VAI+C+ +
Sbjct: 2 LGAVEGPRWK-----QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL 56
Query: 515 HSTRNFMHH-IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE 573
M + I ++ K++H ++V AL +E S ++LI + V G L I E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIV-ALDDIYE------SGGHLYLIMQLVSGGELFDRIVE 109
Query: 574 GHAHQSLTWTQRISAAI--GVAKGIQFLHTGIVPGVFSNNLKITDIL---LDQNLVAKIS 628
+T+R ++ + V +++LH G+ +LK ++L LD++ IS
Sbjct: 110 -----KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSR 687
+ L + + + G + P A+ + +D + G+I ++ G P
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+ L + L+A D + D A + ++ +ME K+P +R + E
Sbjct: 222 NDAKLFEQILKAEYEFDSPYWDDISDSA------KDFIRHLME-------KDPEKRFTCE 268
Query: 748 DVL 750
L
Sbjct: 269 QAL 271
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
K H I + L H+H+V F +F+D+ +F++ E RS +
Sbjct: 55 KPHQREKMSMEISIHRSLAHQHVVG-----FHGFFEDNDF--VFVVLELCRR---RSLLE 104
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
++LT + + G Q+LH V +LK+ ++ L+++L KI + L
Sbjct: 105 LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 161
Query: 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
E + E+ + I P ++ ++D++ G I+ ++VG+P
Sbjct: 162 ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 125/302 (41%), Gaps = 41/302 (13%)
Query: 457 GALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH 515
GA+ P ++ + E+ + +D +G G+ ++ K VAI+C+ K
Sbjct: 3 GAVEGPRWK-----QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE 57
Query: 516 STRNFMHH-IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEG 574
M + I ++ K++H ++V AL +E S ++LI + V G L I E
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIV-ALDDIYE------SGGHLYLIMQLVSGGELFDRIVE- 109
Query: 575 HAHQSLTWTQRISAAI--GVAKGIQFLHTGIVPGVFSNNLKITDIL---LDQNLVAKISS 629
+T+R ++ + V +++LH G+ +LK ++L LD++ IS
Sbjct: 110 ----KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRK 688
+ L + + + G + P A+ + +D + G+I ++ G P
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
Query: 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVED 748
+ L + L+A D + D A + ++ +ME K+P +R + E
Sbjct: 223 DAKLFEQILKAEYEFDSPYWDDISDSA------KDFIRHLME-------KDPEKRFTCEQ 269
Query: 749 VL 750
L
Sbjct: 270 AL 271
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 41/303 (13%)
Query: 456 LGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC 514
LGA+ P ++ + E+ + +D +G G+ ++ K VAI+C+ +
Sbjct: 2 LGAVEGPRWK-----QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL 56
Query: 515 HSTRNFMHH-IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE 573
M + I ++ K++H ++V AL +E S ++LI + V G L I E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIV-ALDDIYE------SGGHLYLIMQLVSGGELFDRIVE 109
Query: 574 GHAHQSLTWTQRISAAI--GVAKGIQFLHTGIVPGVFSNNLKITDIL---LDQNLVAKIS 628
+T+R ++ + V +++LH G+ +LK ++L LD++ IS
Sbjct: 110 -----KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSR 687
+ L + + + G + P A+ + +D + G+I ++ G P
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE 747
+ L + L+A D + D A + ++ +ME K+P +R + E
Sbjct: 222 NDAKLFEQILKAEYEFDSPYWDDISDSA------KDFIRHLME-------KDPEKRFTCE 268
Query: 748 DVL 750
L
Sbjct: 269 QAL 271
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 116 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 166
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 167 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 224 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 273
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 274 LLQP---EYCPDP----LYEVMLKCWHPKAEMRPSFSELV 306
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 77 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 193 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 704 DESARRSM 711
R M
Sbjct: 243 TREQIREM 250
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG++F
Sbjct: 99 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 149
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 150 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 207 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 256
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 257 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 121/263 (46%), Gaps = 35/263 (13%)
Query: 504 VAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGHCFECYFDDSSV-SRIFLIFEY 561
VAI+ + ++KC ++ + + I+ +S+ H ++VS Y+ V ++L+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS--------YYTSFVVKDELWLVMKL 89
Query: 562 VPNGT----LRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFLHTGIVPGVFSNNLKIT 615
+ G+ ++ +++G H+S + A I V +G+++LH G ++K
Sbjct: 90 LSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAG 145
Query: 616 DILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYSGSIDPTNSARGKLEE------KIDI 668
+ILL ++ +I+ + + LA + + + + P A +E+ K DI
Sbjct: 146 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 205
Query: 669 YDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKT 727
+ FG+ +E+ G P + +L LQ + E+ + +K L + K+
Sbjct: 206 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-------DKEMLKKYGKS 258
Query: 728 MMEVCVRCLLKNPAERPSVEDVL 750
++ CL K+P +RP+ ++L
Sbjct: 259 FRKMISLCLQKDPEKRPTAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 121/263 (46%), Gaps = 35/263 (13%)
Query: 504 VAIRCLKMKKCHSTRN-FMHHIELISKLRHRHLVSALGHCFECYFDDSSV-SRIFLIFEY 561
VAI+ + ++KC ++ + + I+ +S+ H ++VS Y+ V ++L+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS--------YYTSFVVKDELWLVMKL 94
Query: 562 VPNGT----LRSWISEGHAHQSLTWTQRISAAI--GVAKGIQFLHTGIVPGVFSNNLKIT 615
+ G+ ++ +++G H+S + A I V +G+++LH G ++K
Sbjct: 95 LSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAG 150
Query: 616 DILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYSGSIDPTNSARGKLEE------KIDI 668
+ILL ++ +I+ + + LA + + + + P A +E+ K DI
Sbjct: 151 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210
Query: 669 YDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKT 727
+ FG+ +E+ G P + +L LQ + E+ + +K L + K+
Sbjct: 211 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-------DKEMLKKYGKS 263
Query: 728 MMEVCVRCLLKNPAERPSVEDVL 750
++ CL K+P +RP+ ++L
Sbjct: 264 FRKMISLCLQKDPEKRPTAAELL 286
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 90 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 140
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 141 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 198 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 247
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 248 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 77 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 193 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 704 DESARRSM 711
R M
Sbjct: 243 TREQIREM 250
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 117 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 167
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 168 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 225 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 274
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 275 LLQP---EYCPDP----LYEVMLKCWHPKAEMRPSFSELV 307
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 97 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 147
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 148 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 205 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 254
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 255 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKM-----KKCHSTRNFMHHI 524
+++ ++ F+GEG +Y+ R KN VAI+ +K+ K R + I
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 525 ELISKLRHRHLV---SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLT 581
+L+ +L H +++ A GH S I L+F+++ L I + LT
Sbjct: 64 KLLQELSHPNIIGLLDAFGH----------KSNISLVFDFMET-DLEVIIKDNSL--VLT 110
Query: 582 WTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
+ + + +G+++LH + +LK ++LLD+N V K++ + L
Sbjct: 111 PSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGL 158
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 98 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 148
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 149 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 206 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 255
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 256 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 97 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 147
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 148 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 205 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 254
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 255 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 95 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 145
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 146 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 203 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 252
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 253 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 96 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 146
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 147 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 204 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 253
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 254 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 93 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 143
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 144 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 201 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 250
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 251 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCL-----KMKKCHSTRNFMHHIELISKLRHRHLVSAL 539
+G G G +Y G L + I C ++ F+ ++ H +++S L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWI-SEGHAHQSLTWTQRISAAIGVAKGIQF 598
G C S ++ Y+ +G LR++I +E H + T I + VAKG+++
Sbjct: 98 GICLR------SEGSPLVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 148
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE------KVGHVIPYSGSI 652
L + +L + +LD+ K++ + L + E K G +P
Sbjct: 149 LAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVVTADESARRS 710
+ + K K D++ FG++L E++ P D+ LQ R
Sbjct: 206 LESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RR 255
Query: 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ P + C D + EV ++C RPS +++
Sbjct: 256 LLQP---EYCPD----PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 112/281 (39%), Gaps = 48/281 (17%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRC----LKMKKCHSTRNFMHHIELISKLRHRHLVSALG 540
+G GS +Y+G T C K+ K R F E + L+H ++V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR-FKEEAEXLKGLQHPNIVR--- 89
Query: 541 HCFECYFD--DSSVSR---IFLIFEYVPNGTLRSWISEGHAHQS---LTWTQRISAAIGV 592
++D +S+V I L+ E +GTL++++ + +W ++I
Sbjct: 90 -----FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------ 138
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI 652
KG+QFLHT P + +LK +I + + +L L + +
Sbjct: 139 LKGLQFLHTR-TPPIIHRDLKCDNIFI-TGPTGSVKIGDLGLATLKRASFAKAVIGTPEF 196
Query: 653 DPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR--S 710
K +E +D+Y FG LE S A + RR S
Sbjct: 197 XAPEXYEEKYDESVDVYAFGXCXLEXATSEYPYSE------------CQNAAQIYRRVTS 244
Query: 711 MVDPA-VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
V PA +K + E +K ++E C+R +N ER S++D+L
Sbjct: 245 GVKPASFDKVAIPE-VKEIIEGCIR---QNKDERYSIKDLL 281
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 485 MGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCF 543
+GEGS G + K+ G VA++ + ++K + + ++ H ++V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVD----MY 108
Query: 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI 603
Y ++++ E++ G L ++ H + Q + + V + + +LH
Sbjct: 109 SSYLVGDE---LWVVMEFLEGGALTDIVT----HTRMNEEQIATVCLSVLRALSYLHNQ- 160
Query: 604 VPGVFSNNLKITDILLDQNLVAKISSYNL-PLLAENAEKVGHVIPYSGSIDPTNSARGKL 662
GV ++K ILL + K+S + +++ K ++ + P +R
Sbjct: 161 --GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPY 218
Query: 663 EEKIDIYDFGLILLEIIVGRP 683
++DI+ G++++E+I G P
Sbjct: 219 GTEVDIWSLGIMVIEMIDGEP 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 77
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 78 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 137 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 193
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 194 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 243
Query: 704 DESARRSM 711
R M
Sbjct: 244 TREQIREM 251
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 77 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 193 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 704 DESARRSM 711
R M
Sbjct: 243 TREQIREM 250
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 77 R-LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 193 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 704 DESARRSM 711
R M
Sbjct: 243 TREQIREM 250
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 77 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 193 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 704 DESARRSM 711
R M
Sbjct: 243 TREQIREM 250
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 89
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 90 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 149 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 205
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 206 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 235
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 77 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 193 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 704 DESARRSM 711
R M
Sbjct: 243 TREQIREM 250
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 95
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 96 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 155 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 211
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 212 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 241
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 84
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 85 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 144 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 200
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 201 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 230
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 80
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 81 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 140 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 196
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 197 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 246
Query: 704 DESARRSM 711
R M
Sbjct: 247 TREQIREM 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 81
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 82 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 141 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 197
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 198 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 247
Query: 704 DESARRSM 711
R M
Sbjct: 248 TREQIREM 255
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 88
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 89 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 148 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 205 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 234
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 485 MGEGSQGQMYRG-RLKNGTFV----AIRCL-KMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+G G+ G +Y+G + G V AI+ L + + FM +++ + H HLV
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ-RISAAIGVAKGIQ 597
LG C I L+ + +P+G L ++ H H+ +Q ++ + +AKG+
Sbjct: 83 LGVCLS--------PTIQLVTQLMPHGCLLEYV---HEHKDNIGSQLLLNWCVQIAKGMM 131
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV----GHVIPYSGSID 653
+L + +L ++L+ KI+ + L L E EK G +P
Sbjct: 132 YLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 654 PTNSARGKLEEKIDIYDFGLILLEIIV--GRP---LKSRKEVDLLKN 695
R K + D++ +G+ + E++ G+P + +R+ DLL+
Sbjct: 189 ECIHYR-KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 88
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 89 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 148 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 205 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 234
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 104
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 105 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 164 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 220
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 221 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 250
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 112
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 113 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 172 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 228
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 229 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 258
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 110
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 111 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 170 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 226
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 227 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 256
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 78/186 (41%), Gaps = 16/186 (8%)
Query: 500 NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559
G VA++ L+ R+F I+++ L +V G + + L+
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY-----GPGRPELRLVM 89
Query: 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL 619
EY+P+G LR ++ A L ++ + + + KG+++L + +L +IL+
Sbjct: 90 EYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILV 144
Query: 620 DQNLVAKISSYNLPLLAENAEKVGHVIPYSGS-----IDPTNSARGKLEEKIDIYDFGLI 674
+ KI+ + L L +K V+ G P + + + D++ FG++
Sbjct: 145 ESEAHVKIADFGLAKLLP-LDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 675 LLEIIV 680
L E+
Sbjct: 204 LYELFT 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 110
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 111 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 170 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 226
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 227 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 256
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 485 MGEGSQGQMYRG-RLKNGTFV----AIRCL-KMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+G G+ G +Y+G + G V AI+ L + + FM +++ + H HLV
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ-RISAAIGVAKGIQ 597
LG C I L+ + +P+G L ++ H H+ +Q ++ + +AKG+
Sbjct: 106 LGVCLS--------PTIQLVTQLMPHGCLLEYV---HEHKDNIGSQLLLNWCVQIAKGMM 154
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKV----GHVIPYSGSID 653
+L + +L ++L+ KI+ + L L E EK G +P
Sbjct: 155 YLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 654 PTNSARGKLEEKIDIYDFGLILLEIIV--GRP---LKSRKEVDLLKN 695
R K + D++ +G+ + E++ G+P + +R+ DLL+
Sbjct: 212 ECIHYR-KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK 257
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 41/291 (14%)
Query: 479 FDTSAFMGEGSQGQMYR--GRLKNGTFVAIRCLKMK--KCHSTRNFMHHIELISKLRHRH 534
++ +G+GS G++ + R+ + A++ + K T + +EL+ KL H +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWTQRISA 588
++ FE D SS +++ E G L R SE A + +
Sbjct: 83 IMK----LFEILEDSSS---FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ------ 129
Query: 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHV 645
V GI ++H + +LK +ILL+ ++ KI + L + K+
Sbjct: 130 ---VFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 646 IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTAD 704
I + I P RG +EK D++ G+IL ++ G P + E D+LK D
Sbjct: 184 IGTAYYIAP-EVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 705 ESARRSMVDPAVN----KACLDESLKTMMEVCVR--CLLKNPAERPSVEDV 749
R++ D A + SL+ C+ + K +E P++ D+
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDL 293
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 114
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 115 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 174 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 230
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+I G+ D T+S ID++ G +L E+++G+P+
Sbjct: 231 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPI 260
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 479 FDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS 537
FD +GEGS G +Y+ K G VAI+ + ++ + + I ++ + H+V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
G YF ++ ++++ EY G++ I +++LT + + KG++
Sbjct: 89 YYG----SYFKNTD---LWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQSTLKGLE 139
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTN 656
+LH ++K +ILL+ AK++ + + L + K VI + P
Sbjct: 140 YLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEV 196
Query: 657 SARGKLEEKIDIYDFGLILLEIIVGRP 683
DI+ G+ +E+ G+P
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKP 223
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 35/251 (13%)
Query: 479 FDTSAFMGEGSQGQMYR--GRLKNGTFVAIRCLKMK--KCHSTRNFMHHIELISKLRHRH 534
++ +G+GS G++ + R+ + A++ + K T + +EL+ KL H +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWTQRISA 588
++ FE D SS +++ E G L R SE A + +
Sbjct: 83 IMK----LFEILEDSSS---FYIVGELYTGGELFDEIIKRKRFSEHDAARIIK------- 128
Query: 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHV 645
V GI ++H + +LK +ILL+ ++ KI + L + K+
Sbjct: 129 --QVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 646 IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTAD 704
I + I P RG +EK D++ G+IL ++ G P + E D+LK D
Sbjct: 184 IGTAYYIAP-EVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 705 ESARRSMVDPA 715
R++ D A
Sbjct: 243 LPQWRTISDDA 253
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
++ + +G GS G +Y+ +L +G VAI+ + K R ++++ KL H ++V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 155
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
L + F + + L+ +YVP R A Q+L + + +
Sbjct: 156 R-LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSY-----------NLPLLAENAEKVGH 644
++H+ G+ ++K ++LLD + V K+ + N+ + +
Sbjct: 215 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 271
Query: 645 VIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVTA 703
+I G+ D T+S ID++ G +L E+++G+P+ VD L ++ + T
Sbjct: 272 LI--FGATDYTSS--------IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 321
Query: 704 DESARRSM 711
R M
Sbjct: 322 TREQIREM 329
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 35/251 (13%)
Query: 479 FDTSAFMGEGSQGQMYR--GRLKNGTFVAIRCLKMK--KCHSTRNFMHHIELISKLRHRH 534
++ +G+GS G++ + R+ + A++ + K T + +EL+ KL H +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWTQRISA 588
++ FE D SS +++ E G L R SE A + +
Sbjct: 83 IMK----LFEILEDSSS---FYIVGELYTGGELFDEIIKRKRFSEHDAARIIK------- 128
Query: 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHV 645
V GI ++H + +LK +ILL+ ++ KI + L + K+
Sbjct: 129 --QVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 646 IPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTAD 704
I + I P RG +EK D++ G+IL ++ G P + E D+LK D
Sbjct: 184 IGTAYYIAP-EVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 705 ESARRSMVDPA 715
R++ D A
Sbjct: 243 LPQWRTISDDA 253
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 16/186 (8%)
Query: 500 NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559
G VA++ L+ R+F I+++ L +V G + + L+
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY-----GPGRQSLRLVM 92
Query: 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL 619
EY+P+G LR ++ A L ++ + + + KG+++L + +L +IL+
Sbjct: 93 EYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILV 147
Query: 620 DQNLVAKISSYNLPLLAENAEKVGHVIPYSGS-----IDPTNSARGKLEEKIDIYDFGLI 674
+ KI+ + L L +K +V+ G P + + + D++ FG++
Sbjct: 148 ESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 675 LLEIIV 680
L E+
Sbjct: 207 LYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 16/186 (8%)
Query: 500 NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559
G VA++ L+ R+F I+++ L +V G + + L+
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY-----GPGRQSLRLVM 93
Query: 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL 619
EY+P+G LR ++ A L ++ + + + KG+++L + +L +IL+
Sbjct: 94 EYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILV 148
Query: 620 DQNLVAKISSYNLPLLAENAEKVGHVIPYSGS-----IDPTNSARGKLEEKIDIYDFGLI 674
+ KI+ + L L +K +V+ G P + + + D++ FG++
Sbjct: 149 ESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 675 LLEIIV 680
L E+
Sbjct: 208 LYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 16/186 (8%)
Query: 500 NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559
G VA++ L+ R+F I+++ L +V G + + L+
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY-----GPGRQSLRLVM 105
Query: 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL 619
EY+P+G LR ++ A L ++ + + + KG+++L + +L +IL+
Sbjct: 106 EYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILV 160
Query: 620 DQNLVAKISSYNLPLLAENAEKVGHVIPYSGS-----IDPTNSARGKLEEKIDIYDFGLI 674
+ KI+ + L L +K +V+ G P + + + D++ FG++
Sbjct: 161 ESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 675 LLEIIV 680
L E+
Sbjct: 220 LYELFT 225
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 45/240 (18%)
Query: 473 EEATNNFDTSAFMGEGSQGQMYRGR------LKNGTFVAIRCLKMKKCHSTR-NFMHHIE 525
E NN + +GEG+ G++++ R + T VA++ LK + + +F
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 526 LISKLRHRHLVSALGHCFECYFDDSSVSR-IFLIFEYVPNGTLRSWISEGHAHQ------ 578
L+++ + ++V LG C +V + + L+FEY+ G L ++ H
Sbjct: 103 LMAEFDNPNIVKLLGVC--------AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 154
Query: 579 ---------------SLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623
L+ +++ A VA G+ +L +L + L+ +N+
Sbjct: 155 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENM 211
Query: 624 VAKISSYNLPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEII 679
V KI+ + L +A+ IP + P + + + D++ +G++L EI
Sbjct: 212 VVKIADFGLSRNIYSADYYKADGNDAIPIRW-MPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 36/271 (13%)
Query: 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALG 540
+G G+ G++ G + G VA++ L +K S I+ + RH H++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII---- 74
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
+ Y S+ + F++ EYV G L +I + H +R+ I A + + H
Sbjct: 75 ---KLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEMEARRLFQQILSA--VDYCH 128
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDP-TNSAR 659
+V +LK ++LLD ++ AKI+ + L + + E + P S R
Sbjct: 129 RHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGR 185
Query: 660 GKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718
++DI+ G+IL ++ G P L K V E RS+
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV------- 238
Query: 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
A L L M++V +P +R +++D+
Sbjct: 239 ATL---LMHMLQV-------DPLKRATIKDI 259
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 44/233 (18%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMH--HIELISKLRHRH 534
+N +G G G +Y+G L VA++ + +NF++ +I + + H +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERP-VAVKVFSFA---NRQNFINEKNIYRVPLMEHDN 68
Query: 535 LVSALGHCFECYFDDSSVS-----RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
+ + D V+ L+ EY PNG+L ++S H S W A
Sbjct: 69 IARFI-------VGDERVTADGRMEYLLVMEYYPNGSLXKYLS---LHTS-DWVSSCRLA 117
Query: 590 IGVAKGIQFLHTGI------VPGVFSNNLKITDILLDQNLVAKISSYNLPL------LAE 637
V +G+ +LHT + P + +L ++L+ + IS + L + L
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177
Query: 638 NAEKVGHVIPYSGSID--PTNSARGKLE--------EKIDIYDFGLILLEIIV 680
E+ I G+I G + +++D+Y GLI EI +
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 45/288 (15%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFM---HHIELISKLR 531
++N+D +G+G+ + R K G A + + KK S R+F + KL+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ 63
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWTQR 585
H ++V E F +L+F+ V G L R + SE A +
Sbjct: 64 HPNIVRLHDSIQEESFH-------YLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 112
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKV 642
+ + I + H+ G+ NLK ++LL + K++ + L + ++E
Sbjct: 113 -----QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702
G + P + + +DI+ G+IL ++VG P ++ L Q++A
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 224
Query: 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
S V P K+ +D +M+ V NP +R + + L
Sbjct: 225 DYPSPEWDTVTPEA-KSLID----SMLTV-------NPKKRITADQAL 260
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 36/271 (13%)
Query: 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALG 540
+G G+ G++ G + G VA++ L +K S I+ + RH H++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII---- 74
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
+ Y S+ + F++ EYV G L +I + H +R+ I A + + H
Sbjct: 75 ---KLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEMEARRLFQQILSA--VDYCH 128
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDP-TNSAR 659
+V +LK ++LLD ++ AKI+ + L + + E + P S R
Sbjct: 129 RHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 185
Query: 660 GKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNK 718
++DI+ G+IL ++ G P L K V E RS+
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV------- 238
Query: 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
A L L M++V +P +R +++D+
Sbjct: 239 ATL---LMHMLQV-------DPLKRATIKDI 259
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLK----MKKCHSTRNFMHHIELIS 528
NF+ +G G+ G+++ R G A++ LK ++K +T + +++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH---AHQSLTWTQR 585
+R + L + F+ + +++ LI +Y+ G L + +S+ H+ +
Sbjct: 114 HIRQSPFLVTLHYAFQ------TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE 167
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL--PLLAENAEKVG 643
I A+ + LH G+ ++K+ +ILLD N ++ + L +A+ E+
Sbjct: 168 IVLAL------EHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER-- 216
Query: 644 HVIPYSGSI-----DPTNSARGKLEEKIDIYDFGLILLEIIVG 681
+ G+I D ++ +D + G+++ E++ G
Sbjct: 217 -AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 33/237 (13%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFM---HHIELISKLR 531
++N+D +G+G+ + R K G A + + KK S R+F + KL+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ 63
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWTQR 585
H ++V E F +L+F+ V G L R + SE A +
Sbjct: 64 HPNIVRLHDSIQEESFH-------YLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 112
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKV 642
+ + I + H+ G+ NLK ++LL + K++ + L + ++E
Sbjct: 113 -----QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699
G + P + + +DI+ G+IL ++VG P ++ L Q++A
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 221
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNALGPQ 241
+L+L N +SF +L +L +L LS NH E+ F+GL L L+L +N L
Sbjct: 68 LLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-T 126
Query: 242 FPKVG----KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ-ALLSLPS 296
P KL + L N S + L+RLDL + + + A L +
Sbjct: 127 IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSN 186
Query: 297 ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336
+ YLN+A L + +L+ +L +DLS N L+ P
Sbjct: 187 LRYLNLAMCNL--REIPNLTPLIKLDELDLSGNHLSAIRP 224
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 33/237 (13%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFM---HHIELISKLR 531
++N+D +G+G+ + R K G A + + KK S R+F + KL+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ 62
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWTQR 585
H ++V E F +L+F+ V G L R + SE A +
Sbjct: 63 HPNIVRLHDSIQEESFH-------YLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 111
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKV 642
+ + I + H+ G+ NLK ++LL + K++ + L + ++E
Sbjct: 112 -----QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 163
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699
G + P + + +DI+ G+IL ++VG P ++ L Q++A
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 33/221 (14%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFM---HHIELISKLR 531
++N+D +G+G+ + R K G A + + KK S R+F + KL+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ 86
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWTQR 585
H ++V E F +L+F+ V G L R + SE A +
Sbjct: 87 HPNIVRLHDSIQEESFH-------YLVFDLVTGGELFEDIVAREFYSEADASHCIQ---- 135
Query: 586 ISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKV 642
+ + I + H+ G+ NLK ++LL + K++ + L + ++E
Sbjct: 136 -----QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
G + P + + +DI+ G+IL ++VG P
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 228
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 27/140 (19%)
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNALG 239
L L L +N N ++F + NLR L LS+NH + + FS L L+VL L NN +
Sbjct: 66 LHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHI- 124
Query: 240 PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL----SLP 295
+++ +N F QLQ+L LS N+ + FP L+ LP
Sbjct: 125 ------------VVVDRNAFEDMA--------QLQKLYLSQNQ-ISRFPVELIKDGNKLP 163
Query: 296 SITYLNIADNKLTGKLFDDL 315
+ L+++ NKL DL
Sbjct: 164 KLMLLDLSSNKLKKLPLTDL 183
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 60/234 (25%)
Query: 485 MGEGSQGQMYRG-RLKNGTF-------VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+G+G+ ++++G R + G + V ++ L + + +F ++SKL H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
G CF C D ++ L+ E+V G+L +++ + ++ W ++ A +A +
Sbjct: 76 LNYGVCF-C--GDENI----LVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAM 126
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTN 656
FL + L+ N+ AK N+ L+ E K G+ P+ DP
Sbjct: 127 HFLE--------------ENTLIHGNVCAK----NILLIREEDRKTGNP-PFIKLSDPGI 167
Query: 657 S----ARGKLEEKI------------------DIYDFGLILLEIIVG--RPLKS 686
S + L+E+I D + FG L EI G +PL +
Sbjct: 168 SITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMXGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 65 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 102
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 160 RERLLNKMXGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 17/166 (10%)
Query: 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIEL 526
L+E + + +G+G GQ+Y GR VAIR + +++ + + F +
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMA 82
Query: 527 ISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRI 586
+ RH ++V +G C S + +I TL S + + + T++I
Sbjct: 83 YRQTRHENVVLFMGACM-------SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQI 135
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
+ I KG+ +LH G+ +LK ++ D V I+ + L
Sbjct: 136 AQEI--VKGMGYLHA---KGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 114/294 (38%), Gaps = 32/294 (10%)
Query: 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKCHSTRNFMHHIE 525
L L + F+ +G G+ GQ+Y+GR +K G AI+ + + I
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEIN 72
Query: 526 LISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ-SLTWTQ 584
++ K H ++ F +++L+ E+ G++ I + W
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGH 644
I I +G+ LH V ++K ++LL +N K+ + + A+ VG
Sbjct: 133 YICREI--LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGR 185
Query: 645 VIPYSGS--------IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ 696
+ G+ I + + K D++ G+ +E+ G P D+ +
Sbjct: 186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP----PLCDMHPMR 241
Query: 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
++ + + P + + ++ +E CL+KN ++RP+ E ++
Sbjct: 242 ALFLIPRNPA-------PRLKSKKWSKKFQSFIE---SCLVKNHSQRPATEQLM 285
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 110/249 (44%), Gaps = 28/249 (11%)
Query: 463 AYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMK-KCHSTRNF 520
Y T + + N+ + MG G+ GQ+++ R K G +A++ ++ +
Sbjct: 11 GYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRI 70
Query: 521 MHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSL 580
+ ++++ K H + CF + ++ V F+ E + GT + +
Sbjct: 71 LMDLDVVLK---SHDCPYIVQCFGTFITNTDV---FIAMELM--GTCAEKLKK---RMQG 119
Query: 581 TWTQRISAAIGVA--KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLA 636
+RI + VA K + +L GV ++K ++ILLD+ K+ + + L+
Sbjct: 120 PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177
Query: 637 ENAEK-----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRK-E 689
+ A+ ++ P IDP + + + + D++ G+ L+E+ G+ P K+ K +
Sbjct: 178 DKAKDRSAGCAAYMAPER--IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
Query: 690 VDLLKNQLQ 698
++L LQ
Sbjct: 236 FEVLTKVLQ 244
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 98/252 (38%), Gaps = 42/252 (16%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL----- 567
K H I + L + H+V F +F+D ++++ E +L
Sbjct: 82 KPHQKEKMSTEIAIHKSLDNPHVVG-----FHGFFEDDDF--VYVVLEICRRRSLLELHK 134
Query: 568 -RSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626
R ++E A + T +G+Q+LH V +LK+ ++ L+ ++ K
Sbjct: 135 RRKAVTEPEARYFMRQT---------IQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 627 ISSYNLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLK 685
I + L E + E+ + I P + ++DI+ G IL ++VG+P
Sbjct: 183 IGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP-- 240
Query: 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
E LK + + S R ++P + + R L +P RPS
Sbjct: 241 -PFETSCLKETYIRIKKNEYSVPRH-INPVAS------------ALIRRMLHADPTLRPS 286
Query: 746 VEDVLWNLQFAA 757
V ++L + F +
Sbjct: 287 VAELLTDEFFTS 298
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 30/246 (12%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS 572
K H I + L + H+V F +F+D ++++ E RS +
Sbjct: 66 KPHQKEKMSTEIAIHKSLDNPHVVG-----FHGFFEDDDF--VYVVLEIC---RRRSLLE 115
Query: 573 EGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
+++T + +G+Q+LH V +LK+ ++ L+ ++ KI + L
Sbjct: 116 LHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGL 172
Query: 633 PLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD 691
E + E+ + I P + ++DI+ G IL ++VG+P E
Sbjct: 173 ATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP---PFETS 229
Query: 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLW 751
LK + + S R ++P + + R L +P RPSV ++L
Sbjct: 230 CLKETYIRIKKNEYSVPRH-INPVAS------------ALIRRMLHADPTLRPSVAELLT 276
Query: 752 NLQFAA 757
+ F +
Sbjct: 277 DEFFTS 282
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 98/252 (38%), Gaps = 42/252 (16%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL----- 567
K H I + L + H+V F +F+D ++++ E +L
Sbjct: 82 KPHQKEKMSTEIAIHKSLDNPHVVG-----FHGFFEDDDF--VYVVLEICRRRSLLELHK 134
Query: 568 -RSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626
R ++E A + T +G+Q+LH V +LK+ ++ L+ ++ K
Sbjct: 135 RRKAVTEPEARYFMRQT---------IQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 627 ISSYNLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLK 685
I + L E + E+ + I P + ++DI+ G IL ++VG+P
Sbjct: 183 IGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP-- 240
Query: 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
E LK + + S R ++P + + R L +P RPS
Sbjct: 241 -PFETSCLKETYIRIKKNEYSVPRH-INPVAS------------ALIRRMLHADPTLRPS 286
Query: 746 VEDVLWNLQFAA 757
V ++L + F +
Sbjct: 287 VAELLTDEFFTS 298
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Query: 474 EATNNFDTSAFM---GEGSQGQMY--RGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELIS 528
+ TN T FM G G+ +++ + RL G A++C+K + + I ++
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLK 61
Query: 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ----SLTWTQ 584
K++H ++V+ L +E S + +L+ + V G L I E + SL Q
Sbjct: 62 KIKHENIVT-LEDIYE------STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYNLPLLAENAEK 641
+SA +++LH G+ +LK ++L ++N I+ + L + +N
Sbjct: 115 VLSA-------VKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-I 163
Query: 642 VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
+ G + P A+ + +D + G+I ++ G P
Sbjct: 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYP 205
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 98/252 (38%), Gaps = 42/252 (16%)
Query: 513 KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL----- 567
K H I + L + H+V F +F+D ++++ E +L
Sbjct: 82 KPHQKEKMSTEIAIHKSLDNPHVVG-----FHGFFEDDDF--VYVVLEICRRRSLLELHK 134
Query: 568 -RSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626
R ++E A + T +G+Q+LH V +LK+ ++ L+ ++ K
Sbjct: 135 RRKAVTEPEARYFMRQT---------IQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 627 ISSYNLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLK 685
I + L E + E+ + I P + ++DI+ G IL ++VG+P
Sbjct: 183 IGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP-- 240
Query: 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
E LK + + S R ++P + + R L +P RPS
Sbjct: 241 -PFETSCLKETYIRIKKNEYSVPRH-INPVAS------------ALIRRMLHADPTLRPS 286
Query: 746 VEDVLWNLQFAA 757
V ++L + F +
Sbjct: 287 VAELLTDEFFTS 298
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 117/271 (43%), Gaps = 36/271 (13%)
Query: 485 MGEGSQGQMYRGRLKNGT--FVAIRCLKMKKCHSTRNFMHH-IELISKLRHRHLVSALGH 541
+G+GS G++++G + N T VAI+ + +++ + I ++S+ ++ G
Sbjct: 30 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG- 87
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
Y D+ ++++I EY+ G+ + G L TQ + + KG+ +LH+
Sbjct: 88 ---SYLKDT---KLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHS 137
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARG 660
++K ++LL ++ K++ + + L + K + + P +
Sbjct: 138 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+ K DI+ G+ +E+ G P S +L + + + P N
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHS---------ELHPM-------KVLFLIPKNNPPT 238
Query: 721 LDESL-KTMMEVCVRCLLKNPAERPSVEDVL 750
L+ + K + E CL K P+ RP+ +++L
Sbjct: 239 LEGNYSKPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 65 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 102
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 160 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 117/271 (43%), Gaps = 36/271 (13%)
Query: 485 MGEGSQGQMYRGRLKNGT--FVAIRCLKMKKCHSTRNFMHH-IELISKLRHRHLVSALGH 541
+G+GS G++++G + N T VAI+ + +++ + I ++S+ ++ G
Sbjct: 35 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG- 92
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
Y D+ ++++I EY+ G+ + G L TQ + + KG+ +LH+
Sbjct: 93 ---SYLKDT---KLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHS 142
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARG 660
++K ++LL ++ K++ + + L + K + + P +
Sbjct: 143 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 199
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+ K DI+ G+ +E+ G P S +L + + + P N
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHS---------ELHPM-------KVLFLIPKNNPPT 243
Query: 721 LDESL-KTMMEVCVRCLLKNPAERPSVEDVL 750
L+ + K + E CL K P+ RP+ +++L
Sbjct: 244 LEGNYSKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 51/226 (22%)
Query: 478 NFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRH 534
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
+V GH E +L EY G L RI IG+ +
Sbjct: 67 VVKFYGHRREGNIQ-------YLFLEYCSGGEL---------------FDRIEPDIGMPE 104
Query: 595 ------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AENAE 640
G+ +LH GI G+ ++K ++LLD+ KIS + L + N E
Sbjct: 105 PDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 641 ----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 162 RLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMXGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMXGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMXGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 51/226 (22%)
Query: 478 NFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRH 534
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAK 594
+V GH E +L EY G L RI IG+ +
Sbjct: 66 VVKFYGHRREGNIQ-------YLFLEYCSGGEL---------------FDRIEPDIGMPE 103
Query: 595 ------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AENAE 640
G+ +LH GI G+ ++K ++LLD+ KIS + L + N E
Sbjct: 104 PDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 641 ----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 161 RLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 117/271 (43%), Gaps = 36/271 (13%)
Query: 485 MGEGSQGQMYRGRLKNGT--FVAIRCLKMKKCHSTRNFMHH-IELISKLRHRHLVSALGH 541
+G+GS G++++G + N T VAI+ + +++ + I ++S+ ++ G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG- 72
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
Y D+ ++++I EY+ G+ + G L TQ + + KG+ +LH+
Sbjct: 73 ---SYLKDT---KLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHS 122
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARG 660
++K ++LL ++ K++ + + L + K + + P +
Sbjct: 123 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+ K DI+ G+ +E+ G P S +L + + + P N
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHS---------ELHPM-------KVLFLIPKNNPPT 223
Query: 721 LDESL-KTMMEVCVRCLLKNPAERPSVEDVL 750
L+ + K + E CL K P+ RP+ +++L
Sbjct: 224 LEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/226 (17%), Positives = 93/226 (41%), Gaps = 31/226 (13%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTR-NFMHHIELISKLRHRHL 535
+F+ +G G G ++ + K + AI+ +++ R M ++ ++KL H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 536 VSALGHCFECYFDDSSVSRI---------FLIFEYVPNGTLRSWISEGHAHQSLTWTQRI 586
V F + + ++ ++ ++ + L+ W++ + + +
Sbjct: 66 VRY----FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVI 646
+ +A+ ++FLH+ G+ +LK ++I + V K+ + L + E+ V+
Sbjct: 122 HIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 647 P-------YSGSI------DPTNSARGKLEEKIDIYDFGLILLEII 679
++G + P K+DI+ GLIL E++
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNA 237
P +L L+NN + D F L++L L L NN FS L LQ L + N
Sbjct: 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113
Query: 238 LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF--VGPFPQALLSLP 295
L P + LV + + N+ R S + +++ N G P A L
Sbjct: 114 LVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL- 172
Query: 296 SITYLNIADNKLTG 309
+ YL I++ KLTG
Sbjct: 173 KLNYLRISEAKLTG 186
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 63 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 100
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 101 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 158 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 117/271 (43%), Gaps = 36/271 (13%)
Query: 485 MGEGSQGQMYRGRLKNGT--FVAIRCLKMKKCHSTRNFMHH-IELISKLRHRHLVSALGH 541
+G+GS G++++G + N T VAI+ + +++ + I ++S+ ++ G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG- 72
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
Y D+ ++++I EY+ G+ + G L TQ + + KG+ +LH+
Sbjct: 73 ---SYLKDT---KLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHS 122
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARG 660
++K ++LL ++ K++ + + L + K + + P +
Sbjct: 123 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+ K DI+ G+ +E+ G P S +L + + + P N
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHS---------ELHPM-------KVLFLIPKNNPPT 223
Query: 721 LDESL-KTMMEVCVRCLLKNPAERPSVEDVL 750
L+ + K + E CL K P+ RP+ +++L
Sbjct: 224 LEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 20/218 (9%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHST-RNFMHHIELISKLRH 532
+++ F +G G+ +Y+G K G +VA++ +K+ T + I L+ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE---GHAHQSLTWTQRISAA 589
++V Y + +++ L+FE++ N L+ ++ G+ + L
Sbjct: 63 ENIV-------RLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL---LAENAEKVGHVI 646
+ +G+ F H + +LK ++L+++ K+ + L + N V
Sbjct: 115 WQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVT 171
Query: 647 PYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + D +R IDI+ G IL E+I G+PL
Sbjct: 172 LWYRAPDVLMGSR-TYSTSIDIWSCGCILAEMITGKPL 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 65 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 102
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 160 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 65 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 102
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 160 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 65 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 102
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 160 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 65 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 102
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 160 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 65 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 102
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 103 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 160 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 476 TNNFDTSAFMGEGSQG--QMYRGRLKNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRH 532
++D +GEG+ G Q+ R+ VA++ + MK+ N I + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V GH E ++ +FL EY G L RI IG+
Sbjct: 64 ENVVKFYGHRRE-----GNIQYLFL--EYCSGGEL---------------FDRIEPDIGM 101
Query: 593 AK------------GIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL--AEN 638
+ G+ +LH GI G+ ++K ++LLD+ KIS + L + N
Sbjct: 102 PEPDAQRFFHQLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 639 AE----KVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVG 681
E K+ +PY + P R + E +D++ G++L ++ G
Sbjct: 159 RERLLNKMCGTLPY---VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 222 FSGLTYLQVLDLENNALGPQFPKVGKKLVTMI-LSKNKFRSAIPAEVSSYYQLQRLDLSS 280
F GL++LQVL L +N L P V L + LS N R + + L+ LD+S
Sbjct: 476 FEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISR 535
Query: 281 NRFVGPFPQALLSLPSITYLNIADNKL 307
N+ + P P +SL + L+I NK
Sbjct: 536 NQLLAPNPDVFVSL---SVLDITHNKF 559
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 101/255 (39%), Gaps = 45/255 (17%)
Query: 15 LAYILLQVNHSEQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEE 74
+AYI LQ NH +Q + L ++Q L ++LT + +
Sbjct: 340 VAYIDLQKNHIAIIQDQTFKFLEKLQTL------------------DLRDNALTTIHFIP 381
Query: 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLE 134
SI + + GNK + ++ + + + +L +L +L + R+ L+
Sbjct: 382 SIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYF------------LLRVPHLQ 429
Query: 135 ILNMSSN-FLNGAIPXXXXXXXXXXXXXXDENML-----AGRVPDWLGSLPILAVLSLRN 188
IL ++ N F + + ENML D L L VL L +
Sbjct: 430 ILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNH 489
Query: 189 NMFNGTLPDSFSYLENLRVLALSNNHF----YGEVPDFSGLTYLQVLDLENNALGPQFPK 244
N N P FS+L LR L+L++N + ++P L++LD+ N L P
Sbjct: 490 NYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-----ANLEILDISRNQLLAPNPD 544
Query: 245 VGKKLVTMILSKNKF 259
V L + ++ NKF
Sbjct: 545 VFVSLSVLDITHNKF 559
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 197 DSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVG-----KKLV 250
++F L NLR+L L ++ Y PD F GL +L L L L K G K L
Sbjct: 67 EAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126
Query: 251 TMILSKNKFRS-AIPAEVSSYYQLQRLDLSSNRFVGPFPQAL--LSLPSITYLNIADNKL 307
+ LSKN+ RS + L+ +D SSN+ L L ++++ ++A N L
Sbjct: 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186
Query: 308 TGKLFDDLS-C-----NPELGFVDLSSN----LLTGQLPNCLLAGSKNRVVLYARNCLAA 357
++ D C N L +D+S N +TG N ++ S+ ++ A + + A
Sbjct: 187 YSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNA-ISKSQAFSLILAHHIMGA 245
Query: 358 G 358
G
Sbjct: 246 G 246
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 94/264 (35%), Gaps = 52/264 (19%)
Query: 130 LSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNN 189
L L++LN++ N +N N+L LP +A + L+ N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 190 MFNGTLPDSFSYLENLRVLALSNN-----HFYGEVPD--FSG------------------ 224
+F +LE L+ L L +N HF +PD SG
Sbjct: 349 HIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHL 408
Query: 225 ----------------LTYLQVLDLENNAL----GPQFPKVGKKLVTMILSKNKFRSAIP 264
+ +LQ+L L N G Q P L + L +N + A
Sbjct: 409 SENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWE 468
Query: 265 AEV-----SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP 319
E+ LQ L L+ N P L ++ L++ N+LT +DL N
Sbjct: 469 TELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANL 528
Query: 320 ELGFVDLSSNLLTGQLPNCLLAGS 343
E+ +D+S N L P+ ++ S
Sbjct: 529 EI--LDISRNQLLAPNPDVFVSLS 550
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 524 IELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWT 583
IE + LRH+H + L H E + ++IF++ EY P G L +I + L+
Sbjct: 59 IEALKNLRHQH-ICQLYHVLE------TANKIFMVLEYCPGGELFDYII---SQDRLSEE 108
Query: 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643
+ + + ++H+ G +LK ++L D+ K+ + L K
Sbjct: 109 ETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGL-CAKPKGNKDY 164
Query: 644 HVIPYSGSIDPTN----SARGKLEEKIDIYDFGLILLEIIVG 681
H+ GS+ + L + D++ G++L ++ G
Sbjct: 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 60/234 (25%)
Query: 485 MGEGSQGQMYRG-RLKNGTF-------VAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV 536
+G+G+ ++++G R + G + V ++ L + + +F ++SKL H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596
G C C D ++ L+ E+V G+L +++ + ++ W ++ A +A +
Sbjct: 76 LNYGVCV-C--GDENI----LVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAM 126
Query: 597 QFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTN 656
FL + L+ N+ AK N+ L+ E K G+ P+ DP
Sbjct: 127 HFLE--------------ENTLIHGNVCAK----NILLIREEDRKTGNP-PFIKLSDPGI 167
Query: 657 S----ARGKLEEKI------------------DIYDFGLILLEIIVG--RPLKS 686
S + L+E+I D + FG L EI G +PL +
Sbjct: 168 SITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCLKMKKCHSTRNFMHHIELISKLRH---- 532
+FD +G GS ++ RLK + A+R +K + + + I+ + +H
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDED----IDWVQTEKHVFEQ 108
Query: 533 ---RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWT 583
+ L CF+ + SR+F + EYV G L + + E HA
Sbjct: 109 ASNHPFLVGLHSCFQ------TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA------- 155
Query: 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643
+ SA I +A + +LH G+ +LK+ ++LLD K++ Y + E
Sbjct: 156 RFYSAEISLA--LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLRPGD 208
Query: 644 HVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682
+ G+ I P +D + G+++ E++ GR
Sbjct: 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 95 SMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXXXXX 154
S+ S +T VK DL R+ + + + R +L+ L ++SN +N
Sbjct: 45 SIPSGLTEAVKSLDLSNNRITYIS-----NSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99
Query: 155 XXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDS--FSYLENLRVLALSN 212
N L+ W L L L+L N + TL ++ FS+L L++L + N
Sbjct: 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGN 158
Query: 213 NHFYGEV--PDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
+ ++ DF+GLT+L+ L+++ + L PK K +
Sbjct: 159 MDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI 197
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIR-CLKMKKCHSTRN----FMHHIELISKLRHRHLVSA 538
+G G G +++G + G + I C+K+ + S R H+ I L H H+V
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ-RISAAIGVAKGIQ 597
LG C S + L+ +Y+P G+L + + H+ Q ++ + +AKG+
Sbjct: 99 LGLC--------PGSSLQLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMY 147
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657
+L G+ NL ++LL +++ + + L +K + YS + P
Sbjct: 148 YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK---QLLYSEAKTPIKW 201
Query: 658 AR------GKLEEKIDIYDFGLILLEII 679
GK + D++ +G+ + E++
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 46/230 (20%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIRCLKMKKCHST---RNFMHHIELISKLRHRHLVSALG 540
+G+G+ G +++ + G VA++ + +ST R F + L H ++V+ L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 541 HCFECYFDDSSVSRIFLIFEYVP---NGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ 597
+ ++L+F+Y+ + +R+ I E Q + + + K I+
Sbjct: 77 -----VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQ--------LIKVIK 123
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSY--------------NLPL-LAENAEKV 642
+LH+G G+ ++K ++ILL+ K++ + N+PL + EN E
Sbjct: 124 YLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 643 GHVIPYSGSIDPTNSARG--------KLEEKIDIYDFGLILLEIIVGRPL 684
P T R K + ID++ G IL EI+ G+P+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 95 SMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXXXXXX 154
S+ S +T VK DL R+ + + + R +L+ L ++SN +N
Sbjct: 19 SIPSGLTEAVKSLDLSNNRITYIS-----NSDLQRCVNLQALVLTSNGINTIEEDSFSSL 73
Query: 155 XXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDS--FSYLENLRVLALSN 212
N L+ W L L L+L N + TL ++ FS+L L++L + N
Sbjct: 74 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGN 132
Query: 213 NHFYGEV--PDFSGLTYLQVLDLENNALGPQFPKVGKKL 249
+ ++ DF+GLT+L+ L+++ + L PK K +
Sbjct: 133 MDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI 171
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 485 MGEGSQGQMYRG-RLKNGTFVAIR-CLKMKKCHSTRN----FMHHIELISKLRHRHLVSA 538
+G G G +++G + G + I C+K+ + S R H+ I L H H+V
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ-RISAAIGVAKGIQ 597
LG C S + L+ +Y+P G+L + + H+ Q ++ + +AKG+
Sbjct: 81 LGLC--------PGSSLQLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMY 129
Query: 598 FLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657
+L G+ NL ++LL +++ + + L +K + YS + P
Sbjct: 130 YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK---QLLYSEAKTPIKW 183
Query: 658 AR------GKLEEKIDIYDFGLILLEII 679
GK + D++ +G+ + E++
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPY 648
V G+ +LH + +LK ++LL+ ++ + KI + L + EN +K+ +
Sbjct: 145 VLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
+ I P R K +EK D++ G+IL ++ G P
Sbjct: 202 AYYIAP-EVLRKKYDEKCDVWSIGVILFILLAGYP 235
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE H HQ L SA G
Sbjct: 60 HPNIVKLLDVI-------HTENKLYLVFE--------------HVHQDLKTFMDASALTG 98
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 149
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 150 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 EIDQLFRIFRTLGTPDE 224
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Query: 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNA 237
P A+L L+NN F L+NL L L NN P F+ L L+ L L N
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 238 LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN--RFVGPFPQALLSLP 295
L K+ K L + + +N+ + + Q+ ++L +N + G A +
Sbjct: 112 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 171
Query: 296 SITYLNIADNKLT 308
++Y+ IAD +T
Sbjct: 172 KLSYIRIADTNIT 184
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Query: 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNA 237
P A+L L+NN F L+NL L L NN P F+ L L+ L L N
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 238 LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN--RFVGPFPQALLSLP 295
L K+ K L + + +N+ + + Q+ ++L +N + G A +
Sbjct: 112 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 171
Query: 296 SITYLNIADNKLT 308
++Y+ IAD +T
Sbjct: 172 KLSYIRIADTNIT 184
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCLKMKKCHSTRNFMHHIELISKLRH---- 532
+FD +G GS ++ RLK + A++ +K + + + I+ + +H
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED----IDWVQTEKHVFEQ 65
Query: 533 ---RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWT 583
+ L CF+ + SR+F + EYV G L + + E HA
Sbjct: 66 ASNHPFLVGLHSCFQ------TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA------- 112
Query: 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643
+ SA I +A + +LH G+ +LK+ ++LLD K++ Y + E
Sbjct: 113 RFYSAEISLA--LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLRPGD 165
Query: 644 HVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682
+ G+ I P +D + G+++ E++ GR
Sbjct: 166 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 485 MGEGSQGQM-----YRGRLKNG-TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSA 538
+GEGS G++ Y+ + K F++ + LK H I + LRH H++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHM--RVEREISYLKLLRHPHII-- 72
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH---AHQSLTWTQRISAAIGVAKG 595
+ Y ++ + I ++ EY G L +I E + + Q+I AI
Sbjct: 73 -----KLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 596 IQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS-GSIDP 654
+ +H +LK ++LLD NL KI+ + L N G+ + S GS P
Sbjct: 127 HKIVH---------RDLKPENLLLDDNLNVKIADFGL----SNIMTDGNFLKTSCGS--P 171
Query: 655 TNSA----RGKLEE--KIDIYDFGLILLEIIVGR 682
+A GKL ++D++ G++L ++VGR
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 30/155 (19%)
Query: 123 LSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILA 182
+G + LSSLE+L M+ N EN L PD L L
Sbjct: 142 FNGIFNGLSSLEVLKMAGN-------------------SFQENFL----PDIFTELRNLT 178
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNAL--- 238
L L P +F+ L +L+VL +S+N+F+ + + L LQVLD N +
Sbjct: 179 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 238
Query: 239 -GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272
+ L + L++N F A E S+ Q
Sbjct: 239 KKQELQHFPSSLAFLNLTQNDF--ACTCEHQSFLQ 271
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 54/146 (36%), Gaps = 32/146 (21%)
Query: 178 LPILAVLSLRNNMFNGT-LPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLEN 235
L L VL + N F LPD F+ L NL L LS P F+ L+ LQVL++
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM-- 206
Query: 236 NALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLP 295
S N F S LQ LD S N + Q L P
Sbjct: 207 -------------------SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP 247
Query: 296 -SITYLNIADNKLTGKLFDDLSCNPE 320
S+ +LN+ N D +C E
Sbjct: 248 SSLAFLNLTQN--------DFACTCE 265
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCLKMKKCHSTRNFMHHIELISKLRH---- 532
+FD +G GS ++ RLK + A++ +K + + + I+ + +H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED----IDWVQTEKHVFEQ 61
Query: 533 ---RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWT 583
+ L CF+ + SR+F + EYV G L + + E HA
Sbjct: 62 ASNHPFLVGLHSCFQ------TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA------- 108
Query: 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643
+ SA I +A + +LH G+ +LK+ ++LLD K++ Y + E
Sbjct: 109 RFYSAEISLA--LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLRPGD 161
Query: 644 HVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682
+ G+ I P +D + G+++ E++ GR
Sbjct: 162 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 62/260 (23%)
Query: 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELIS 528
E NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLK 64
Query: 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISA 588
+L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 65 ELNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASA 103
Query: 589 AIGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 104 LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL---- 156
Query: 637 ENAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-K 685
A G +P + + E +DI+ G I E++ R L
Sbjct: 157 --ARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 212
Query: 686 SRKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 213 GDSEIDQLFRIFRTLGTPDE 232
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 478 NFDTSAFMGEGSQGQMYRGRLKNGTFV-AIRCLKMKKCHSTRNF------MHHIELISKL 530
+FD +G GS ++ RLK + A++ +K + + + H E S
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN- 79
Query: 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTL------RSWISEGHAHQSLTWTQ 584
H LV L CF+ + SR+F + EYV G L + + E HA +
Sbjct: 80 -HPFLV-GLHSCFQ------TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA-------R 124
Query: 585 RISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGH 644
SA I +A + +LH G+ +LK+ ++LLD K++ Y + E
Sbjct: 125 FYSAEISLA--LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLRPGDT 177
Query: 645 VIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682
+ G+ I P +D + G+++ E++ GR
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 113/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 63 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 115
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 116 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 172
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 173 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 220
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D ++E+ C NP RPS +++
Sbjct: 221 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 62/260 (23%)
Query: 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELIS 528
E NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLK 64
Query: 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISA 588
+L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 65 ELNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASA 103
Query: 589 AIGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 104 LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL---- 156
Query: 637 ENAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-K 685
A G +P + + E +DI+ G I E++ R L
Sbjct: 157 --ARAFG--VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFP 212
Query: 686 SRKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 213 GDSEIDQLFRIFRTLGTPDE 232
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 114/305 (37%), Gaps = 41/305 (13%)
Query: 463 AYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHS 516
A F +E E A S +G+GS G +Y G K T VAI+ +
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 517 TR-NFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS--- 572
R F++ ++ + H+V LG S +I E + G L+S++
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLR 114
Query: 573 -EGHAHQSL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628
E + L + ++ I A +A G+ +L+ +L + ++ ++ KI
Sbjct: 115 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 171
Query: 629 SYNLP---LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLK 685
+ + + K G + + P + G D++ FG++L EI
Sbjct: 172 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----- 226
Query: 686 SRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS 745
L Q ++ ++ R M ++K D + E+ C NP RPS
Sbjct: 227 -------LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPS 277
Query: 746 VEDVL 750
+++
Sbjct: 278 FLEII 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 38/294 (12%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRN---FMHHIELISKLR 531
++ + +G G+ G++ + K G AI+ +K +T N + + ++ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H +++ +E +F+D +L+ E G L E Q +
Sbjct: 80 HPNIMK----LYE-FFEDKR--NYYLVMEVYRGGEL---FDEIILRQKFSEVDAAVIMKQ 129
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPY 648
V G +LH + +LK ++LL+ ++ + KI + L E K+ +
Sbjct: 130 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 186
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESA 707
+ I P R K +EK D++ G+IL ++ G P + + ++LK + + D
Sbjct: 187 AYYIAP-EVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPD 245
Query: 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL---WNLQFAAQ 758
+ D A + L +M L P++R S E+ L W ++F +Q
Sbjct: 246 WTQVSDEA-------KQLVKLM------LTYEPSKRISAEEALNHPWIVKFCSQ 286
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 225 LTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV 284
L+ LQ+ ++ N F L + L+ N + +PAE+ + L+ LDLS NR
Sbjct: 231 LSNLQIFNISANIFKYDF------LTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLT 283
Query: 285 GPFPQALLSLPSITYLNIADNKLTG--KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342
P L S + Y DN +T F +L CN L F+ + N L Q L
Sbjct: 284 S-LPAELGSCFQLKYFYFFDNMVTTLPWEFGNL-CN--LQFLGVEGNPLEKQFLKILTEK 339
Query: 343 SKNRVVLYARN 353
S ++ Y R+
Sbjct: 340 SVTGLIFYLRD 350
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 113/271 (41%), Gaps = 36/271 (13%)
Query: 485 MGEGSQGQMYRGRLKNGT--FVAIRCLKMKKCHSTRNFMHH-IELISKLRHRHLVSALGH 541
+G+GS G++++G + N T VAI+ + +++ + I ++S+ ++ G
Sbjct: 31 IGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+ S++++I EY+ G+ + G + Q + + KG+ +LH+
Sbjct: 90 YLKG-------SKLWIIMEYLGGGSALDLLRAGPFDE----FQIATMLKEILKGLDYLHS 138
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARG 660
++K ++LL + K++ + + L + K + + P +
Sbjct: 139 ---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+ K DI+ G+ +E+ G P S D+ R + P N
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNS----DM------------HPMRVLFLIPKNNPPT 239
Query: 721 L-DESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L + K+ E CL K+P+ RP+ +++L
Sbjct: 240 LVGDFTKSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP-- 647
I +A+ ++FLH+ G+ +LK ++I + V K+ + L + E+ V+
Sbjct: 171 IQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 648 -----YSGSI------DPTNSARGKLEEKIDIYDFGLILLEII 679
+ G + P K+DI+ GLIL E++
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 48/184 (26%)
Query: 205 LRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNK------ 258
L L +SNN ++P+ ++L+++D++NN+L + P + L + N+
Sbjct: 133 LEYLGVSNNQL-EKLPELQNSSFLKIIDVDNNSLK-KLPDLPPSLEFIAAGNNQLEELPE 190
Query: 259 -----FRSAIPAEVSSYYQLQRLDLSSNRFVG--------------PFPQALLS------ 293
F +AI A+ +S +L L LS V PF + +
Sbjct: 191 LQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLK 250
Query: 294 -----LPSITYLNIADNKLTGKLFDDLSCNPE-LGFVDLSSNLLTG--QLPNCL--LAGS 343
PS+ LN+ DN LT DL P+ L F+D+S N+ +G +LP L L S
Sbjct: 251 TLPDLPPSLEALNVRDNYLT-----DLPELPQSLTFLDVSENIFSGLSELPPNLYYLNAS 305
Query: 344 KNRV 347
N +
Sbjct: 306 SNEI 309
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ K++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 72 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 229
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 230 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE---GHAHQS 579
++ + H+V LG S +I E + G L+S++ A+
Sbjct: 78 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 580 L----TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
+ + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 235
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 236 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISE---GHAHQS 579
++ + H+V LG S +I E + G L+S++ A+
Sbjct: 68 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 580 L----TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
+ + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 178 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 225
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 226 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 61 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 99
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 100 IPLPLIKSYLFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 150
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 151 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 209 EIDQLFRIFRTLGTPDE 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 62 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKTFMDASAL 100
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 101 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 152
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 153 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 210 DSEIDQLFRIFRTLGTPDE 228
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 61/159 (38%), Gaps = 7/159 (4%)
Query: 177 SLPILAVLSLRNN-MFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLE 234
L +L L L +N P +F L L L L P F GL LQ L L+
Sbjct: 77 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 136
Query: 235 NNAL----GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA 290
+NAL F +G L + L N+ S + L RL L NR P A
Sbjct: 137 DNALQALPDDTFRDLGN-LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHA 195
Query: 291 LLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329
L + L + N L+ + L+ L ++ L+ N
Sbjct: 196 FRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 62 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 100
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 101 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 152
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 153 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 210 DSEIDQLFRIFRTLGTPDE 228
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 61 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 99
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 100 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 151
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 152 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 209 DSEIDQLFRIFRTLGTPDE 227
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 100 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 210 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 257
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 258 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 60 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 98
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 149
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 150 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 EIDQLFRIFRTLGTPDE 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 78 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 235
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 236 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 59 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 97
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 98 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 149
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 150 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 207 DSEIDQLFRIFRTLGTPDE 225
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 61 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 99
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 100 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL----- 151
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 152 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 209 DSEIDQLFRIFRTLGTPDE 227
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 64
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 65 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 103
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 104 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 154
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 155 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 212
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 213 EIDQLFRIFRTLGTPDE 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALG-- 540
+GEG+ G +Y+ + G VA++ +++ + I L+ +L H ++VS +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
H C + L+FE++ L+ + E L +Q + +G+ H
Sbjct: 89 HSERC---------LTLVFEFM-EKDLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCH 136
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNL------PLLAENAEKVGHVIPYSGSIDP 654
+ +LK ++L++ + K++ + L P+ + E V + Y
Sbjct: 137 QH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVL 191
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
S K +DI+ G I E+I G+PL
Sbjct: 192 MGSK--KYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 61 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 99
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 150
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 151 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 209 EIDQLFRIFRTLGTPDE 225
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 60 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 98
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 149
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 150 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 EIDQLFRIFRTLGTPDE 224
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 61 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 99
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 100 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 151
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 152 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 208
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 209 DSEIDQLFRIFRTLGTPDE 227
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 198 SFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNA----LGPQFPKVGKKLVTM 252
SF NL +L L +N G + F+GLT L+ LDL +NA + P + L T+
Sbjct: 50 SFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTL 109
Query: 253 ILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307
L + + P LQ L L N L ++T+L + N++
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRI 164
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 76/204 (37%), Gaps = 31/204 (15%)
Query: 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF-LNGAIPXXXXXXXXXXXXXXDENM 166
+L +L L S L G + + L+ LE L++S N L P D
Sbjct: 56 NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCG 115
Query: 167 LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSG 224
L P L L L L++N ++F L NL L L N VP+ F G
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRI-PSVPEHAFRG 174
Query: 225 LTYLQVLDLENNALGPQFPKVGK---KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281
L L L L N + P + +L+T+ L N S +PAEV
Sbjct: 175 LHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL-SMLPAEV-------------- 219
Query: 282 RFVGPFPQALLSLPSITYLNIADN 305
L+ L S+ YL + DN
Sbjct: 220 ---------LVPLRSLQYLRLNDN 234
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 60 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 98
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 99 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 150
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 151 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 DSEIDQLFRIFRTLGTPDE 226
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 61 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 99
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 150
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 151 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 209 EIDQLFRIFRTLGTPDE 225
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 60 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 98
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 99 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 150
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 151 -ARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 DSEIDQLFRIFRTLGTPDE 226
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 61/159 (38%), Gaps = 7/159 (4%)
Query: 177 SLPILAVLSLRNN-MFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLE 234
L +L L L +N P +F L L L L P F GL LQ L L+
Sbjct: 78 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137
Query: 235 NNAL----GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA 290
+NAL F +G L + L N+ S + L RL L NR P A
Sbjct: 138 DNALQALPDDTFRDLGN-LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHA 196
Query: 291 LLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329
L + L + N L+ + L+ L ++ L+ N
Sbjct: 197 FRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 61 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 99
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 150
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 151 RAFG--VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 209 EIDQLFRIFRTLGTPDE 225
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 59 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 97
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 98 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 149
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 150 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 207 DSEIDQLFRIFRTLGTPDE 225
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 62 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 100
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 101 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 152
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 153 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 209
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 210 DSEIDQLFRIFRTLGTPDE 228
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 60 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 98
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 149
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 150 RAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 EIDQLFRIFRTLGTPDE 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 65 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 174
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 222
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 223 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 59 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 97
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 98 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 149
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 150 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 207 DSEIDQLFRIFRTLGTPDE 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 71 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 228
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 229 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 62
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 63 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 101
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 102 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 153
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 154 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 210
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 211 DSEIDQLFRIFRTLGTPDE 229
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 173 DWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQV 230
D S P L L L N+ + P +F+ L NLR L L +N +P F+GL+ L
Sbjct: 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL-KLIPLGVFTGLSNLTK 108
Query: 231 LDLENNAL 238
LD+ N +
Sbjct: 109 LDISENKI 116
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 94/221 (42%), Gaps = 22/221 (9%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHH-IELI 527
++ E+ F+ +G G+ ++ K G A++C+ K + + + I ++
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 528 SKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRIS 587
K++H ++V AL +E S + ++L+ + V G L I E +T++ +
Sbjct: 75 RKIKHENIV-ALEDIYE------SPNHLYLVMQLVSGGELFDRIVEKG-----FYTEKDA 122
Query: 588 AAI--GVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYNLPLLAENAEKV 642
+ + V + +LH G+ +LK ++L D+ IS + L + + +
Sbjct: 123 STLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM 179
Query: 643 GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
G + P A+ + +D + G+I ++ G P
Sbjct: 180 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 220
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 60 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 98
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 149
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 150 RAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 EIDQLFRIFRTLGTPDE 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 30/155 (19%)
Query: 123 LSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILA 182
+G + LSSLE+L M+ N EN L PD L L
Sbjct: 437 FNGIFNGLSSLEVLKMAGN-------------------SFQENFL----PDIFTELRNLT 473
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNAL--- 238
L L P +F+ L +L+VL +S+N+F+ + + L LQVLD N +
Sbjct: 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 533
Query: 239 -GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272
+ L + L++N F A E S+ Q
Sbjct: 534 KKQELQHFPSSLAFLNLTQNDF--ACTCEHQSFLQ 566
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 54/149 (36%), Gaps = 32/149 (21%)
Query: 175 LGSLPILAVLSLRNNMFNGT-LPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLD 232
L L VL + N F LPD F+ L NL L LS P F+ L+ LQVL+
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 233 LENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL 292
+ S N F S LQ LD S N + Q L
Sbjct: 501 M---------------------SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 539
Query: 293 SLP-SITYLNIADNKLTGKLFDDLSCNPE 320
P S+ +LN+ N D +C E
Sbjct: 540 HFPSSLAFLNLTQN--------DFACTCE 560
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 72 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 182 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 229
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 230 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 59 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKDFMDASAL 97
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 98 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL----- 149
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 150 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 207 DSEIDQLFRIFRTLGTPDE 225
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 30/155 (19%)
Query: 123 LSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILA 182
+G + LSSLE+L M+ N EN L PD L L
Sbjct: 461 FNGIFNGLSSLEVLKMAGN-------------------SFQENFL----PDIFTELRNLT 497
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQVLDLENNAL--- 238
L L P +F+ L +L+VL +S+N+F+ + + L LQVLD N +
Sbjct: 498 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 557
Query: 239 -GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQ 272
+ L + L++N F A E S+ Q
Sbjct: 558 KKQELQHFPSSLAFLNLTQNDF--ACTCEHQSFLQ 590
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 54/149 (36%), Gaps = 32/149 (21%)
Query: 175 LGSLPILAVLSLRNNMFNGT-LPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLD 232
L L VL + N F LPD F+ L NL L LS P F+ L+ LQVL+
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524
Query: 233 LENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL 292
+ S N F S LQ LD S N + Q L
Sbjct: 525 M---------------------SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 563
Query: 293 SLP-SITYLNIADNKLTGKLFDDLSCNPE 320
P S+ +LN+ N D +C E
Sbjct: 564 HFPSSLAFLNLTQN--------DFACTCE 584
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 71 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + ++ ++ KI + +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 228
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D + E+ C NP RPS +++
Sbjct: 229 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 45/117 (38%), Gaps = 3/117 (2%)
Query: 124 SGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILAV 183
+G L +LE L ++ N L D N L P SL L
Sbjct: 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY 137
Query: 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNAL 238
LSL N F L +L+ L L NN VP+ F LT L+ L L+NN L
Sbjct: 138 LSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQL 193
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 60 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 98
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 99 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL----- 150
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 151 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 207
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 DSEIDQLFRIFRTLGTPDE 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 62/259 (23%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ HQ L SA
Sbjct: 59 LNHPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASAL 97
Query: 590 IGVA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637
G+ +G+ F H+ V +LK ++L++ K++ + L
Sbjct: 98 TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL----- 149
Query: 638 NAEKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KS 686
A G +P + + E +DI+ G I E++ R L
Sbjct: 150 -ARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 206
Query: 687 RKEVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 207 DSEIDQLFRIFRTLGTPDE 225
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALG-- 540
+GEG+ G +Y+ + G VA++ +++ + I L+ +L H ++VS +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH 600
H C + L+FE++ L+ + E L +Q + +G+ H
Sbjct: 89 HSERC---------LTLVFEFM-EKDLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCH 136
Query: 601 TGIVPGVFSNNLKITDILLDQNLVAKISSYNL------PLLAENAEKVGHVIPYSGSIDP 654
+ +LK ++L++ + K++ + L P+ + E V + Y
Sbjct: 137 QH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVL 191
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
S K +DI+ G I E+I G+PL
Sbjct: 192 MGSK--KYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 19 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 71
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 72 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 123
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 124 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 171
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 172 GF------AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 222
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 254 LSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308
L +N + P S Y +L+R+DLS+N+ P A L S+ L + NK+T
Sbjct: 39 LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQF 242
+ L N P +FS + LR + LSNN PD F GL L L L N + +
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-EL 95
Query: 243 PK 244
PK
Sbjct: 96 PK 97
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 230 VLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ 289
++D L + + + + L +N + P S Y +L+R+DLS+N+ P
Sbjct: 15 IVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPD 74
Query: 290 ALLSLPSITYLNIADNKLT 308
A L S+ L + NK+T
Sbjct: 75 AFQGLRSLNSLVLYGNKIT 93
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQF 242
+ L N P +FS + LR + LSNN PD F GL L L L N + +
Sbjct: 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-EL 95
Query: 243 PK 244
PK
Sbjct: 96 PK 97
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 61
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 62 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 100
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 101 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 151
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 152 RAFG--VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 210 EIDQLFRIFRTLGTPDE 226
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 22/142 (15%)
Query: 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH--------TGIVPG 606
++LI + G+L ++ +TW + A +++G+ +LH G P
Sbjct: 88 LWLITAFHDKGSLTDYLK----GNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS---IDPT------NS 657
+ + K ++LL +L A ++ + L + E + G G+ + P N
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINF 203
Query: 658 ARGKLEEKIDIYDFGLILLEII 679
R +ID+Y GL+L E++
Sbjct: 204 QRDAF-LRIDMYAMGLVLWELV 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 127/298 (42%), Gaps = 55/298 (18%)
Query: 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRN-FMHHI 524
+L EL++ ++F+ + +G G+ G +++ K +G +A + + ++ + RN + +
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 525 ELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQ 584
+++ + ++V G ++ D +S + E++ G+L Q L
Sbjct: 59 QVLHECNSPYIVGFYG----AFYSDGEIS---ICMEHMDGGSL---------DQVLKKAG 102
Query: 585 RI------SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP--LLA 636
RI +I V KG+ +L + ++K ++IL++ K+ + + L+
Sbjct: 103 RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 160
Query: 637 ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR----PLKSRKEVDL 692
E A + Y + P + DI+ GL L+E+ VGR P+ + +D
Sbjct: 161 EMANEFVGTRSY---MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDY 217
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
+ N+ P + A + + +CL+KNPAER ++ ++
Sbjct: 218 IVNE---------------PPPKLPSAVFSLEFQDFVN---KCLIKNPAERADLKQLM 257
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 38/247 (15%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE+V + L+ ++ + A + S
Sbjct: 62 LNHPNIVKLLDVI-------HTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYL 112
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
+ +G+ F H+ V +LK ++L++ K++ + L A G +P
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------ARAFG--VPVR 161
Query: 650 GSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQ 698
+ + E +DI+ G I E++ R L E+D L +
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 699 AVVTADE 705
+ T DE
Sbjct: 222 TLGTPDE 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++++DQ K++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
L A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GL------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 113/271 (41%), Gaps = 36/271 (13%)
Query: 485 MGEGSQGQMYRGRLKNGT--FVAIRCLKMKKCHSTRNFMHH-IELISKLRHRHLVSALGH 541
+G+GS G++Y+G + N T VAI+ + +++ + I ++S+ ++ G
Sbjct: 27 IGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+ +++++I EY+ G+ + G + T+ I I KG+ +LH+
Sbjct: 86 YLKS-------TKLWIIMEYLGGGSALDLLKPGPLEE--TYIATILREI--LKGLDYLHS 134
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGHVIPYSGSIDPTNSARG 660
++K ++LL + K++ + + L + K + + P +
Sbjct: 135 ---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 661 KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKAC 720
+ K DI+ G+ +E+ G P S DL R + P +
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNS----DL------------HPMRVLFLIPKNSPPT 235
Query: 721 LD-ESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L+ + K E CL K+P RP+ +++L
Sbjct: 236 LEGQHSKPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 41/298 (13%)
Query: 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCHSTR-NFMH 522
+E E A S +G+GS G +Y G K T VAI+ + R F++
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 523 HIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWIS----EGHAHQ 578
++ + H+V LG S +I E + G L+S++ E +
Sbjct: 65 EASVMKEFNCHHVVRLLGVV-------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 579 SL---TWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP-- 633
L + ++ I A +A G+ +L+ +L + + ++ KI + +
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRD 174
Query: 634 -LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692
+ K G + + P + G D++ FG++L EI
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 222
Query: 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
L Q ++ ++ R M ++K D ++E+ C NP RPS +++
Sbjct: 223 LAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 44/288 (15%)
Query: 485 MGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRN---FMHHIELISKLRHRHLVSALG 540
+G G+ G++ + K G AI+ +K +T N + + ++ +L H +++
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK--- 68
Query: 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAI---GVAKGIQ 597
+E +F+D +L+ E G L E Q + + AA+ V G
Sbjct: 69 -LYE-FFEDKR--NYYLVMEVYRGGEL---FDEIILRQKFS---EVDAAVIMKQVLSGTT 118
Query: 598 FLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDP 654
+LH + +LK ++LL+ ++ + KI + L E K+ + + I P
Sbjct: 119 YLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAP 175
Query: 655 TNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVD 713
R K +EK D++ G+IL ++ G P + + ++LK + + D + D
Sbjct: 176 -EVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD 234
Query: 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL---WNLQFAAQ 758
A + L +M L P++R S E+ L W ++F +Q
Sbjct: 235 EA-------KQLVKLM------LTYEPSKRISAEEALNHPWIVKFCSQ 269
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 68/180 (37%), Gaps = 10/180 (5%)
Query: 91 PLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPXX 150
P +F+ + VK DL ++ +L L S + LE L ++ N +N
Sbjct: 264 PDNFTFKGLEASGVKTCDLSKSKIFAL-----LKSVFSHFTDLEQLTLAQNEINKIDDNA 318
Query: 151 XXXXXXXXXXXXDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210
+N L +L L VL L N SF L NL+ LAL
Sbjct: 319 FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378
Query: 211 SNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268
N VPD F LT LQ + L N P++ ++ L+KN + A+ S
Sbjct: 379 DTNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI--DYLSRWLNKNSQKEQGSAKCS 435
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY+P G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYMPGGDMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ K++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 44/233 (18%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM--KKCHSTRNFMHHIELISKLRH 532
+++F + +GEG+ G + K G VAI+ ++ K + R + I+++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 533 RHLVSALGHCFECYFDDS--SVSRIFLIFEYVPNGTLR----SWISEGHAHQSLTWTQRI 586
++++ F DS + + +++I E + R +S+ H + T R
Sbjct: 69 ENIIT----IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL-----AENAEK 641
A+ V G +H +LK +++L++ N K+ + L + A+N+E
Sbjct: 124 --AVKVLHGSNVIH---------RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 642 VGHVIPYSGSIDPTNS----------ARGKLEEKIDIYDFGLILLEIIVGRPL 684
G SG ++ + K +D++ G IL E+ + RP+
Sbjct: 173 TGQ---QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY+P G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYMPGGDMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ K++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 194 TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV--GK-KLV 250
+LP S + L+NL+ L + N+ P L L+ LDL +P + G+ L
Sbjct: 197 SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256
Query: 251 TMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS 296
+IL +P ++ QL++LDL + P + LP+
Sbjct: 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA+ +++ + ST + I L+ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 61 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 99
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 100 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 150
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 151 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 209 EIDQLFRIFRTLGTPDE 225
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 62/257 (24%)
Query: 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISKLR 531
NF +GEG+ G +Y+ R K G VA+ +++ + ST + I L+ +L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++V L + ++++L+FE++ HQ L SA G
Sbjct: 60 HPNIVKLLDVI-------HTENKLYLVFEFL--------------HQDLKKFMDASALTG 98
Query: 592 VA------------KGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639
+ +G+ F H+ V +LK ++L++ K++ + L A
Sbjct: 99 IPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------A 149
Query: 640 EKVGHVIPYSGSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRK 688
G +P + + E +DI+ G I E++ R L
Sbjct: 150 RAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 689 EVDLLKNQLQAVVTADE 705
E+D L + + T DE
Sbjct: 208 EIDQLFRIFRTLGTPDE 224
>pdb|3NF1|A Chain A, Crystal Structure Of The Tpr Domain Of Kinesin Light Chain
1
Length = 311
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 166 MLAGRVPDWLGSLPILA-VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSG 224
+L G+ + + P+ L +R + PD L NL +L N Y EV +
Sbjct: 119 VLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLC-QNQGKYEEVEYY-- 175
Query: 225 LTYLQVLDLENNALGPQFPKVGK---KLVTMILSKNKFRSA 262
Y + L++ LGP P V K L + L + KF+ A
Sbjct: 176 --YQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 214
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 26/212 (12%)
Query: 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614
FL+F+ + G L +++E + + A + V + L+ + +LK
Sbjct: 99 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKP 152
Query: 615 TDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPT------NSARGKLEEKIDI 668
+ILLD ++ K++ + + EK+ V + P N +++D+
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 669 YDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKT 727
+ G+I+ ++ G P RK++ +L+ + S P D+ T
Sbjct: 213 WSTGVIMYTLLAGSPPFWHRKQMLMLRMIM--------SGNYQFGSPE-----WDDYSDT 259
Query: 728 MMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759
+ ++ R L+ P +R + E+ L + F V
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 38/247 (15%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ + L+ ++ + A + S
Sbjct: 62 LNHPNIVKLLDVI-------HTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYL 112
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
+ +G+ F H+ V +LK ++L++ K++ + L A G +P
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------ARAFG--VPVR 161
Query: 650 GSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQ 698
+ + E +DI+ G I E++ R L E+D L +
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 699 AVVTADE 705
+ T DE
Sbjct: 222 TLGTPDE 228
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 44/233 (18%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM--KKCHSTRNFMHHIELISKLRH 532
+++F + +GEG+ G + K G VAI+ ++ K + R + I+++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 533 RHLVSALGHCFECYFDDS--SVSRIFLIFEYVPNGTLR----SWISEGHAHQSLTWTQRI 586
++++ F DS + + +++I E + R +S+ H + T R
Sbjct: 69 ENIIT----IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL-----AENAEK 641
A+ V G +H +LK +++L++ N K+ + L + A+N+E
Sbjct: 124 --AVKVLHGSNVIH---------RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 642 VGHVIPYSGSIDPTNS----------ARGKLEEKIDIYDFGLILLEIIVGRPL 684
G SG + + K +D++ G IL E+ + RP+
Sbjct: 173 TGQ---QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614
FL+F+ + G L +++E + + A + V + L+ + +LK
Sbjct: 86 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKP 139
Query: 615 TDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPT------NSARGKLEEKIDI 668
+ILLD ++ K++ + + EK+ V + P N +++D+
Sbjct: 140 ENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 199
Query: 669 YDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKT 727
+ G+I+ ++ G P RK++ +L+ + S P D+ T
Sbjct: 200 WSTGVIMYTLLAGSPPFWHRKQMLMLRMIM--------SGNYQFGSPE-----WDDYSDT 246
Query: 728 MMEVCVRCLLKNPAERPSVEDVL 750
+ ++ R L+ P +R + E+ L
Sbjct: 247 VKDLVSRFLVVQPQKRYTAEEAL 269
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++++DQ K++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 38/247 (15%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ + L+ ++ + A + S
Sbjct: 62 LNHPNIVKLLDVI-------HTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYL 112
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
+ +G+ F H+ V +LK ++L++ K++ + L A G +P
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL------ARAFG--VPVR 161
Query: 650 GSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQ 698
+ + E +DI+ G I E++ R L E+D L +
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 699 AVVTADE 705
+ T DE
Sbjct: 222 TLGTPDE 228
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++++DQ K++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++++DQ K++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++++DQ +++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
L A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GL------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 38/247 (15%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ + L+ ++ + A + S
Sbjct: 61 LNHPNIVKLLDVI-------HTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYL 111
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
+ +G+ F H+ V +LK ++L++ K++ + L A G +P
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL------ARAFG--VPVR 160
Query: 650 GSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQ 698
+ + E +DI+ G I E++ R L E+D L +
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 699 AVVTADE 705
+ T DE
Sbjct: 221 TLGTPDE 227
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCL---KMKKCHSTRNFMHHIELISKLR 531
++ + +G+GS G++ + K G A++ + ++K+ + + ++L+ +L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H +++ +E +F+D +L+ E G L I + + I
Sbjct: 91 HPNIMK----LYE-FFEDKGY--FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--- 140
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPY 648
V GI ++H + +LK ++LL+ ++ +I + L E ++K+ I
Sbjct: 141 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 197
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKN 695
+ I P G +EK D++ G+IL ++ G P E D+LK
Sbjct: 198 AYYIAP-EVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 244
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 38/247 (15%)
Query: 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM----KKCHSTRNFMHHIELISK 529
+ NF +GEG+ G +Y+ R K G VA++ +++ + ST + I L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAA 589
L H ++V L + ++++L+FE++ + L+ ++ + A + S
Sbjct: 60 LNHPNIVKLLDVI-------HTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYL 110
Query: 590 IGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYS 649
+ +G+ F H+ V +LK ++L++ K++ + L A G +P
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL------ARAFG--VPVR 159
Query: 650 GSIDPTNSARGKLEE----------KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQ 698
+ + E +DI+ G I E++ R L E+D L +
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 699 AVVTADE 705
+ T DE
Sbjct: 220 TLGTPDE 226
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHC 542
+GEG+ G +Y+ + G A++ ++++K + I ++ +L+H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV------ 63
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSW-ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+ Y + R+ L+FE++ + + EG L S + + GI + H
Sbjct: 64 -KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHD 118
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGH--VIPYSGSIDPTNSA 658
V +LK ++L+++ KI+ + L K H V + + D +
Sbjct: 119 ---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 659 RGKLEEKIDIYDFGLILLEIIVGRPL 684
+ K IDI+ G I E++ G PL
Sbjct: 176 K-KYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 26/212 (12%)
Query: 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614
FL+F+ + G L +++E + + A + V + L+ + +LK
Sbjct: 99 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKP 152
Query: 615 TDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPT------NSARGKLEEKIDI 668
+ILLD ++ K++ + + EK+ V + P N +++D+
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 669 YDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKT 727
+ G+I+ ++ G P RK++ +L+ + S P D+ T
Sbjct: 213 WSTGVIMYTLLAGSPPFWHRKQMLMLRMIM--------SGNYQFGSPE-----WDDYSDT 259
Query: 728 MMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759
+ ++ R L+ P +R + E+ L + F V
Sbjct: 260 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 208 LALSNNHFYGEVPDFSGLTYLQVLDLENN---ALGPQFPKVGKKLVTMILSKNKFRSAIP 264
L L N F + S +L ++DL NN L Q +L+T+ILS N+ R P
Sbjct: 36 LYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 95
Query: 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307
L+ L L N A L ++++L I N L
Sbjct: 96 RTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 242 FPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL 300
PK + + + + L N+F + +P E+S+Y L +DLS+NR Q+ ++ + L
Sbjct: 25 LPKGIPRDVTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 83
Query: 301 NIADNKLTG---KLFD-------------DLSCNPELGFVDLS--SNLLTGQLP 336
++ N+L + FD D+S PE F DLS S+L G P
Sbjct: 84 ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 137
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 254 LSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS--LPSITYLNIADNKLTGKL 311
++N F ++ S+ +LQ L L N F AL++ + S+ L+++ N L
Sbjct: 360 FTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHA 419
Query: 312 FDDLSCNPELGFV-DLSSNLLTGQLPNCL 339
+D E V +LSSN+LTG + CL
Sbjct: 420 YDRTCAWAESILVLNLSSNMLTGSVFRCL 448
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 186 LRNNMFNGTLPDSFSYLENLRV-LALSNNHFYGEVPDFSGLTYLQVLDLENNAL-GPQFP 243
L+N + + S LE L V L N+H Y ++ + VL+L +N L G F
Sbjct: 389 LKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWA--ESILVLNLSSNMLTGSVFR 446
Query: 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303
+ K+ + L N+ S IP +V+ LQ L+++SN+ L S+ Y+ +
Sbjct: 447 CLPPKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLH 505
Query: 304 DN 305
DN
Sbjct: 506 DN 507
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
Query: 174 WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN-----HFYGEVPDFSGLTYL 228
WL + P L + L N + F ++ L L +SNN + YG+ + L
Sbjct: 249 WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQ-----PIPTL 303
Query: 229 QVLDLENNAL------GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281
+VLDL +N L PQF +L + L N S + ++S+++ L+ L LS N
Sbjct: 304 KVLDLSHNHLLHVERNQPQF----DRLENLYLDHN---SIVTLKLSTHHTLKNLTLSHN 355
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCL---KMKKCHSTRNFMHHIELISKLR 531
++ + +G+GS G++ + K G A++ + ++K+ + + ++L+ +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H +++ +E +F+D +L+ E G L I + + I
Sbjct: 85 HPNIMK----LYE-FFEDKGY--FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--- 134
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPY 648
V GI ++H + +LK ++LL+ ++ +I + L E ++K+ I
Sbjct: 135 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 191
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKN 695
+ I P G +EK D++ G+IL ++ G P E D+LK
Sbjct: 192 AYYIAP-EVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 238
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCL---KMKKCHSTRNFMHHIELISKLR 531
++ + +G+GS G++ + K G A++ + ++K+ + + ++L+ +L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H +++ +E +F+D +L+ E G L I + + I
Sbjct: 108 HPNIMK----LYE-FFEDKGY--FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--- 157
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPY 648
V GI ++H + +LK ++LL+ ++ +I + L E ++K+ I
Sbjct: 158 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 214
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKN 695
+ I P G +EK D++ G+IL ++ G P E D+LK
Sbjct: 215 AYYIAP-EVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 261
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHC 542
+GEG+ G +Y+ + G A++ ++++K + I ++ +L+H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV------ 63
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSW-ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+ Y + R+ L+FE++ + + EG +S+T S + + GI + H
Sbjct: 64 -KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAK---SFLLQLLNGIAYCHD 118
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGH--VIPYSGSIDPTNSA 658
V +LK ++L+++ KI+ + L K H V + + D +
Sbjct: 119 ---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 659 RGKLEEKIDIYDFGLILLEIIVGRPL 684
+ K IDI+ G I E++ G PL
Sbjct: 176 K-KYSTTIDIWSVGCIFAEMVNGAPL 200
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 485 MGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST--RNFMHHIELISKLRHRHLVSALGHC 542
+GEG+ G +Y+ + G A++ ++++K + I ++ +L+H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV------ 63
Query: 543 FECYFDDSSVSRIFLIFEYVPNGTLRSW-ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT 601
+ Y + R+ L+FE++ + + EG L S + + GI + H
Sbjct: 64 -KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHD 118
Query: 602 GIVPGVFSNNLKITDILLDQNLVAKISSYNLP-LLAENAEKVGH--VIPYSGSIDPTNSA 658
V +LK ++L+++ KI+ + L K H V + + D +
Sbjct: 119 ---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 659 RGKLEEKIDIYDFGLILLEIIVGRPL 684
+ K IDI+ G I E++ G PL
Sbjct: 176 K-KYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCL---KMKKCHSTRNFMHHIELISKLR 531
++ + +G+GS G++ + K G A++ + ++K+ + + ++L+ +L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H +++ +E +F+D +L+ E G L I + + I
Sbjct: 109 HPNIMK----LYE-FFEDKGY--FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--- 158
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPY 648
V GI ++H + +LK ++LL+ ++ +I + L E ++K+ I
Sbjct: 159 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 215
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKN 695
+ I P G +EK D++ G+IL ++ G P E D+LK
Sbjct: 216 AYYIAP-EVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 262
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 23/187 (12%)
Query: 572 SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631
S+G + +T IS + VA+G++FL + +L +ILL +N V KI +
Sbjct: 188 SDGFYKEPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFG 244
Query: 632 LPL-LAENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEI--IVGRPLKS 686
L + +N + V G + P + K D++ +G++L EI + G P
Sbjct: 245 LARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPG 304
Query: 687 RKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV 746
V DE S + + + S + ++ + C ++P ERP
Sbjct: 305 --------------VQMDEDF-CSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRF 349
Query: 747 EDVLWNL 753
+++ L
Sbjct: 350 AELVEKL 356
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 26 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI 78
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 79 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 130
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 131 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 178
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 179 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 44/233 (18%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKM--KKCHSTRNFMHHIELISKLRH 532
+++F + +GEG+ G + K G VAI+ ++ K + R + I+++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 533 RHLVSALGHCFECYFDDS--SVSRIFLIFEYVPNGTLR----SWISEGHAHQSLTWTQRI 586
++++ F DS + + +++I E + R +S+ H + T R
Sbjct: 69 ENIIT----IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 587 SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL-----AENAEK 641
A+ V G +H +LK +++L++ N K+ + L + A+N+E
Sbjct: 124 --AVKVLHGSNVIH---------RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 642 VGHVIPYSGSIDPTNS----------ARGKLEEKIDIYDFGLILLEIIVGRPL 684
G SG + + K +D++ G IL E+ + RP+
Sbjct: 173 TGQ---QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
E HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 138 FXEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 127 ISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDW--LGSLPILAVL 184
+S L+SL+ LN SSN + P ++ + +V D L L L L
Sbjct: 147 LSGLTSLQQLNFSSNQVTDLKPLANLTTLERL------DISSNKVSDISVLAKLTNLESL 200
Query: 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPK 244
NN + P L NL L+L+ N ++ + LT L LDL NN + P
Sbjct: 201 IATNNQISDITP--LGILTNLDELSLNGNQLK-DIGTLASLTNLTDLDLANNQISNLAPL 257
Query: 245 VG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYL--- 300
G KL + L N+ + P ++ L L+L+ N+ P + +L ++TYL
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 313
Query: 301 --NIAD 304
NI+D
Sbjct: 314 FNNISD 319
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
E HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 139 FXEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
E HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 138 FXEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1VL2|A Chain A, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
From Thermotoga Maritima At 1.65 A Resolution
pdb|1VL2|B Chain B, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
From Thermotoga Maritima At 1.65 A Resolution
pdb|1VL2|C Chain C, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
From Thermotoga Maritima At 1.65 A Resolution
pdb|1VL2|D Chain D, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
From Thermotoga Maritima At 1.65 A Resolution
Length = 421
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313
EV + + RLD+ NRF+G + + P T L IA L G D
Sbjct: 266 EVGAKNGVGRLDMVENRFIGIKSRGVYETPGATILWIAHRDLEGITMD 313
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 556 FLIFEYVPNGTL------RSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFS 609
+LIF+ V G L R + SE A + Q+I A+ LH + GV
Sbjct: 86 YLIFDLVTGGELFEDIVAREYYSEADASHCI---QQILEAV--------LHCHQM-GVVH 133
Query: 610 NNLKITDILLDQNL---VAKISSYNLPLLAENAEKVGHVIPYS-GSIDPTNSARGKLEEK 665
NLK ++LL L K++ + L + E ++ + G + P + +
Sbjct: 134 RNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKP 193
Query: 666 IDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699
+D++ G+IL ++VG P ++ L Q++A
Sbjct: 194 VDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 54 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI 106
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 107 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 158
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 159 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 206
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 207 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 26/125 (20%)
Query: 123 LSGKISRLSSLEILNMSSNFLNGAIPXXXXXXXXXXXXXXDENMLAGRVPDWLGSLPILA 182
+G + LSSLE+L M+ N EN L PD L L
Sbjct: 437 FNGIFNGLSSLEVLKMAGN-------------------SFQENFL----PDIFTELRNLT 473
Query: 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGP 240
L L P +F+ L +L+VL +++N VPD F LT LQ + L N
Sbjct: 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDC 532
Query: 241 QFPKV 245
P++
Sbjct: 533 SCPRI 537
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
Query: 174 WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN-----HFYGEVPDFSGLTYL 228
WL + P L + L N + F ++ L L +SNN + YG+ + L
Sbjct: 243 WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQ-----PIPTL 297
Query: 229 QVLDLENNAL------GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281
+VLDL +N L PQF +L + L N S + ++S+++ L+ L LS N
Sbjct: 298 KVLDLSHNHLLHVERNQPQF----DRLENLYLDHN---SIVTLKLSTHHTLKNLTLSHN 349
>pdb|3BZ5|A Chain A, Functional Domain Of Inlj From Listeria Monocytogenes
Includes A Cysteine Ladder
Length = 457
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 204 NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263
NL LA +N D + LT L L+ + N L L + ++N
Sbjct: 86 NLTYLACDSNKLTN--LDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEI- 142
Query: 264 PAEVSSYYQLQRLDLSSNRFVGPF---PQALL-----SLPSITYLNIADNKLTGKL-FD- 313
+VS QL LD N+ + PQ L S IT L+++ NKL +L D
Sbjct: 143 --DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDT 200
Query: 314 ------DLSCNPELGFVDLSSNLLT 332
DL+ N +L F+D SSN LT
Sbjct: 201 NNITKLDLNQNIQLTFLDCSSNKLT 225
>pdb|2Z2E|A Chain A, Crystal Structure Of Canine Milk Lysozyme Stabilized
Against Non-Enzymatic Deamidation
pdb|2Z2E|B Chain B, Crystal Structure Of Canine Milk Lysozyme Stabilized
Against Non-Enzymatic Deamidation
Length = 129
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 455 KLGALGLPAYRTFSLEE---LEEATNNFDTSAFMGEGSQG 491
KL ++G+ + +SL + E +NF+T AF G SQG
Sbjct: 11 KLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFQGRQSQG 50
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++++DQ +++ +
Sbjct: 138 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 111/292 (38%), Gaps = 52/292 (17%)
Query: 485 MGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSA 538
+GEG G++Y G N VA++ K K C + FM ++ L H H+V
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
+G E ++I E P G L ++ SL + ++ + K + +
Sbjct: 91 IGIIEE--------EPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAY 140
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI------ 652
L + ++ + +IL+ K+ + L E+ + Y S+
Sbjct: 141 LES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY------YKASVTRLPIK 191
Query: 653 --DPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ--LQAVVTADESAR 708
P + + D++ F + + EI+ ++ L+N+ + + D +
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSF----GKQPFFWLENKDVIGVLEKGDRLPK 247
Query: 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760
+ P L T+M RC +P++RP +++ +L Q++
Sbjct: 248 PDLCPPV---------LYTLM---TRCWDYDPSDRPRFTELVCSLSDVYQME 287
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 16/160 (10%)
Query: 175 LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN-------HFYGEVPDFSGLTY 227
LP L L L +N +F YL LR L L NN + + VP L
Sbjct: 79 FNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL 138
Query: 228 LQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF---- 283
++ LE + V + + + + K IP +++ +L+ L+LS NR
Sbjct: 139 GELKRLEYISEAAFEGLVNLRYLNLGMCNLK---DIP-NLTALVRLEELELSGNRLDLIR 194
Query: 284 VGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323
G F Q L SL + ++ + FDDL EL
Sbjct: 195 PGSF-QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNL 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 111/292 (38%), Gaps = 52/292 (17%)
Query: 485 MGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSA 538
+GEG G++Y G N VA++ K K C + FM ++ L H H+V
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
+G E ++I E P G L ++ SL + ++ + K + +
Sbjct: 79 IGIIEE--------EPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAY 128
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI------ 652
L + ++ + +IL+ K+ + L E+ + Y S+
Sbjct: 129 LES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY------YKASVTRLPIK 179
Query: 653 --DPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ--LQAVVTADESAR 708
P + + D++ F + + EI+ ++ L+N+ + + D +
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSF----GKQPFFWLENKDVIGVLEKGDRLPK 235
Query: 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760
+ P L T+M RC +P++RP +++ +L Q++
Sbjct: 236 PDLCPPV---------LYTLM---TRCWDYDPSDRPRFTELVCSLSDVYQME 275
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++++DQ K++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 195 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 139 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 196 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 130 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 187 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 224
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 87 EH------TLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
E HA R AA + ++LH+ + +LK ++++DQ K++ +
Sbjct: 139 FXEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 188 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 225
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M ++ G A++ L +K +
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI 85
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EY P G + S +
Sbjct: 86 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGR 137
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
E HA R AA + ++LH+ + +LK ++++DQ K++ +
Sbjct: 138 FXEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 186 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 111/292 (38%), Gaps = 52/292 (17%)
Query: 485 MGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSA 538
+GEG G++Y G N VA++ K K C + FM ++ L H H+V
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQF 598
+G E ++I E P G L ++ SL + ++ + K + +
Sbjct: 75 IGIIEE--------EPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAY 124
Query: 599 LHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSI------ 652
L + ++ + +IL+ K+ + L E+ + Y S+
Sbjct: 125 LES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY------YKASVTRLPIK 175
Query: 653 --DPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ--LQAVVTADESAR 708
P + + D++ F + + EI+ ++ L+N+ + + D +
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSF----GKQPFFWLENKDVIGVLEKGDRLPK 231
Query: 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760
+ P L T+M RC +P++RP +++ +L Q++
Sbjct: 232 PDLCPPV---------LYTLM---TRCWDYDPSDRPRFTELVCSLSDVYQME 271
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 16/157 (10%)
Query: 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN-------HFYGEVPDFSGLTYLQV 230
LP L L L +N +F YL LR L L NN + + VP L ++
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL 141
Query: 231 LDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF----VGP 286
LE + V + + + + K IP +++ +L+ L+LS NR G
Sbjct: 142 KRLEYISEAAFEGLVNLRYLNLGMCNLK---DIP-NLTALVRLEELELSGNRLDLIRPGS 197
Query: 287 FPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323
F Q L SL + ++ + FDDL EL
Sbjct: 198 F-QGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNL 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 188 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 592 VAKGIQFLHTGIVPGVF----SNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP 647
+ + ++ +H I P S N+K+ D + LV I+ +A ++ P
Sbjct: 141 LKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK------TRDAGCRPYMAP 194
Query: 648 YSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVVTADES 706
IDP+ S +G + + D++ G+ L E+ GR P V +QL VV D
Sbjct: 195 --ERIDPSASRQG-YDVRSDVWSLGITLYELATGRFPYPKWNSV---FDQLTQVVKGDP- 247
Query: 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750
P ++ + E + + CL K+ ++RP +++L
Sbjct: 248 -------PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 141 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 198 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY---------GEVPDFSGLTYLQVL 231
L +L L NN D LENL +L +N+ G V GL++L +L
Sbjct: 482 LTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHIL 541
Query: 232 DLENNAL 238
+LE+N L
Sbjct: 542 NLESNGL 548
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 195 LPDSFSYLENLRVLALSNNHFYG----EVPDFSGLTYLQVL-DLENNALGPQFPKVGKKL 249
LP L L+ L LS NHF +F LT+L + +++ LG + L
Sbjct: 290 LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNL 349
Query: 250 VTMILSKNKFRSA--IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKL 307
T+ LS N ++ ++ + LQ L+LS N +G QA P + L++A +L
Sbjct: 350 QTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRL 409
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 247
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 10/214 (4%)
Query: 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRH 532
E+ + +G GS G +++ +L VAI+ + K R ++++ ++H
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKH 91
Query: 533 RHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGV 592
++V L F D + L+ EYVP R+ Q++ +
Sbjct: 92 PNVVD-LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 593 AKGIQFLHTGIVPGVFSNNLKITDILLD--QNLVAKISSYNLPLLAENAEKVGHVIPYSG 650
+ + ++H+ G+ ++K ++LLD ++ I + +L V +
Sbjct: 151 LRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYY 207
Query: 651 SIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
IDI+ G ++ E++ G+PL
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL 241
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 218 EVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
EV D S L QV D + + + L+ N+ R A + Y QL LD
Sbjct: 7 EVADCSHLKLTQVPD-----------DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLD 55
Query: 278 LSSNRFVGPFPQALLSLPSITYLNIADNKLT 308
+ N P+ LP + LN+ N+L+
Sbjct: 56 VGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 175 LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLE 234
L L L L NN + P L NL L+L+ N ++ + LT L LDL
Sbjct: 191 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGTLASLTNLTDLDLA 247
Query: 235 NNALGPQFPKVG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
NN + P G KL + L N+ + P ++ L L+L+ N+ P + +
Sbjct: 248 NNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 303
Query: 294 LPSITYL-----NIAD 304
L ++TYL NI+D
Sbjct: 304 LKNLTYLTLYFNNISD 319
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 175 LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLE 234
L L L L NN + P L NL L+L+ N ++ + LT L LDL
Sbjct: 190 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGTLASLTNLTDLDLA 246
Query: 235 NNALGPQFPKVG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
NN + P G KL + L N+ + P ++ L L+L+ N+ P + +
Sbjct: 247 NNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 302
Query: 294 LPSITYL-----NIAD 304
L ++TYL NI+D
Sbjct: 303 LKNLTYLTLYFNNISD 318
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 222 FSGLTYLQVLDLENNALG---PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278
F L +L L+L+ N L P + + + L +NK + +QL+ L+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 279 SSNRFVGPFPQALLSLPSITYLNIADN 305
N+ P + L S+T LN+A N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 54/138 (39%), Gaps = 32/138 (23%)
Query: 199 FSYLENLRVLALSNN--HFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSK 256
YL N+R LAL N H + + + LTYL IL+
Sbjct: 59 IQYLPNVRYLALGGNKLHDISALKELTNLTYL------------------------ILTG 94
Query: 257 NKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG---KLFD 313
N+ +S L+ L L N+ L ++TYLN+A N+L +FD
Sbjct: 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD 154
Query: 314 DLSCNPELGFVDLSSNLL 331
L+ EL DLS N L
Sbjct: 155 KLTNLTEL---DLSYNQL 169
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 175 LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLE 234
L L L L NN + P L NL L+L+ N ++ + LT L LDL
Sbjct: 194 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGTLASLTNLTDLDLA 250
Query: 235 NNALGPQFPKVG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
NN + P G KL + L N+ + P ++ L L+L+ N+ P + +
Sbjct: 251 NNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 306
Query: 294 LPSITYL-----NIAD 304
L ++TYL NI+D
Sbjct: 307 LKNLTYLTLYFNNISD 322
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 175 LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLE 234
L L L L NN + P L NL L+L+ N ++ + LT L LDL
Sbjct: 191 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGTLASLTNLTDLDLA 247
Query: 235 NNALGPQFPKVG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
NN + P G KL + L N+ + P ++ L L+L+ N+ P + +
Sbjct: 248 NNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 303
Query: 294 LPSITYL-----NIAD 304
L ++TYL NI+D
Sbjct: 304 LKNLTYLTLYFNNISD 319
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 218 EVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
EV D S L QV D + + + L+ N+ R A + Y QL LD
Sbjct: 17 EVADCSHLKLTQVPD-----------DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLD 65
Query: 278 LSSNRFVGPFPQALLSLPSITYLNIADNKLT 308
+ N P+ LP + LN+ N+L+
Sbjct: 66 VGFNTISKLEPELCQKLPMLKVLNLQHNELS 96
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 218 EVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLD 277
EV D S L QV D + + + L+ N+ R A + Y QL LD
Sbjct: 12 EVADCSHLKLTQVPD-----------DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLD 60
Query: 278 LSSNRFVGPFPQALLSLPSITYLNIADNKLT 308
+ N P+ LP + LN+ N+L+
Sbjct: 61 VGFNTISKLEPELCQKLPMLKVLNLQHNELS 91
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 26 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI 78
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + ++ A+ F E F D+S ++++ EYVP G + S +
Sbjct: 79 EH------TLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGR 130
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
E HA R AA + ++LH+ + +LK ++L+DQ +++ +
Sbjct: 131 FXEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 178
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 179 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 175 LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLD 232
L +L L L+L N G +F L +L ++ H + + P F L L+VL+
Sbjct: 371 LKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLN 430
Query: 233 LENNALGP--QFPKVG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRLD---LSSNRFVGP 286
L + L Q G + L + L N F+ ++ + + L+ LSS +
Sbjct: 431 LSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSI 490
Query: 287 FPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNR 346
QA L ++ +L+++ N LTG D LS L +++++SN + P+ L A S+
Sbjct: 491 DQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPALSQQS 549
Query: 347 VVLYARNCLAAGNENQHPLSF 367
++ + N L N H +++
Sbjct: 550 IINLSHNPLDCTCSNIHFITW 570
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 175 LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLE 234
L L L L NN + P L NL L+L+ N ++ + LT L LDL
Sbjct: 195 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGTLASLTNLTDLDLA 251
Query: 235 NNALGPQFPKVG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
NN + P G KL + L N+ + P ++ L L+L+ N+ P + +
Sbjct: 252 NNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 307
Query: 294 LPSITYL-----NIAD 304
L ++TYL NI+D
Sbjct: 308 LKNLTYLTLYFNNISD 323
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 175 LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLE 234
L L L L NN + P L NL L+L+ N ++ + LT L LDL
Sbjct: 190 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIGTLASLTNLTDLDLA 246
Query: 235 NNALGPQFPKVG-KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
NN + P G KL + L N+ + P ++ L L+L+ N+ P + +
Sbjct: 247 NNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 302
Query: 294 LPSITYL-----NIAD 304
L ++TYL NI+D
Sbjct: 303 LKNLTYLTLYFNNISD 318
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 48/237 (20%)
Query: 462 PAYRTFSLEELEEATNNFDTSAFMGEGSQGQ-MYRGRLKNGTFVAIRCLKMKKCHSTRNF 520
PA T L++ E +G GS G+ M + G A++ L +K +
Sbjct: 34 PAQNTAHLDQFERIRT-------LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI 86
Query: 521 MHHIELISKLRHRHLVSALGHCF----ECYFDDSSVSRIFLIFEYVPNGTLRSWI----- 571
H L + + A+ F E F D+S ++++ EY P G + S +
Sbjct: 87 EH------TLNEKRIQQAVNFPFLVKLEFSFKDNS--NLYMVLEYAPGGEMFSHLRRIGR 138
Query: 572 -SEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630
SE HA R AA + ++LH+ + +LK ++L+DQ K++ +
Sbjct: 139 FSEPHA--------RFYAA-QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 186
Query: 631 NLPLLAENAEKV-GHVIPYSGS---IDPTNSARGKLEEKIDIYDFGLILLEIIVGRP 683
A++V G G+ + P + +D + G+++ E+ G P
Sbjct: 187 GF------AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 133/328 (40%), Gaps = 59/328 (17%)
Query: 461 LPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRN 519
L A+ T + E ++F+ + +G G+ G +++ K +G +A + + ++ + RN
Sbjct: 17 LEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN 76
Query: 520 -FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ 578
+ ++++ + ++V G ++ D +S + E++ G+L Q
Sbjct: 77 QIIRELQVLHECNSPYIVGFYG----AFYSDGEIS---ICMEHMDGGSL---------DQ 120
Query: 579 SLTWTQRI------SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
L RI +I V KG+ +L + ++K ++IL++ K+ + +
Sbjct: 121 VLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGV 178
Query: 633 P--LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR---PLKSR 687
L+ A Y + P + DI+ GL L+E+ VGR P
Sbjct: 179 SGQLIDSMANSFVGTRSY---MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 235
Query: 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDE----SLKTMMEVCV---------- 733
KE++L+ A+ R +NK +D ++ +++ V
Sbjct: 236 KELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSG 295
Query: 734 -----------RCLLKNPAERPSVEDVL 750
+CL+KNPAER ++ ++
Sbjct: 296 VFSLEFQDFVNKCLIKNPAERADLKQLM 323
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 123/301 (40%), Gaps = 43/301 (14%)
Query: 461 LPAYRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRN 519
L A+ T + E ++F+ + +G G+ G +++ K +G +A + + ++ + RN
Sbjct: 9 LEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN 68
Query: 520 -FMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQ 578
+ ++++ + ++V G ++ D +S + E++ G+L Q
Sbjct: 69 QIIRELQVLHECNSPYIVGFYG----AFYSDGEIS---ICMEHMDGGSL---------DQ 112
Query: 579 SLTWTQRI------SAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632
L RI +I V KG+ +L + ++K ++IL++ K+ + +
Sbjct: 113 VLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGV 170
Query: 633 P--LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR-PLKSRKE 689
L+ A Y + P + DI+ GL L+E+ VGR P+ S
Sbjct: 171 SGQLIDSMANSFVGTRSY---MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSG 227
Query: 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 749
+ L +V P + + + +CL+KNPAER ++ +
Sbjct: 228 SMAIFELLDYIVNEPP--------PKLPSGVFSLEFQDFVN---KCLIKNPAERADLKQL 276
Query: 750 L 750
+
Sbjct: 277 M 277
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE-NAEKVGHVIPYSG 650
+ +G++++H+ V +LK +++LL+ KI + L +A+ + + G + Y
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 651 S-----IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL 684
+ + +++G + IDI+ G IL E++ RP+
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGS 651
+ +G++++H+ + +LK +++ ++++ KI Y L ++ E G+V
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDD-EMTGYVATRWYR 189
Query: 652 IDPTNSARGKLEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVT 702
+ +DI+ G I+ E++ GR L +D LK L+ V T
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 199 FSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVG-KKLVTMILSKN 257
+ L NL+VL L N P +GLT LQ L + NN + P KL T+ N
Sbjct: 131 LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDN 189
Query: 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLS 293
K P ++S L + L N+ P A LS
Sbjct: 190 KISDISP--LASLPNLIEVHLKDNQISDVSPLANLS 223
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 22/228 (9%)
Query: 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCL---KMKKCHSTRNFMHHIELISKLR 531
++ + +G+GS G++ + K G A++ + ++K+ + + ++L+ +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 532 HRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIG 591
H ++ +E +F+D +L+ E G L I + + I
Sbjct: 85 HPNIXK----LYE-FFEDKGY--FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--- 134
Query: 592 VAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISSYNLPLLAENAEKVGHVIPY 648
V GI + H + +LK ++LL+ ++ +I + L E ++K I
Sbjct: 135 VLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGT 191
Query: 649 SGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKN 695
+ I P G +EK D++ G+IL ++ G P E D+LK
Sbjct: 192 AYYIAP-EVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 238
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 177 SLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVPDFSGLTYLQ-VLDLE 234
S P L VL L ++ L +L L L+ N + FSGL+ LQ ++ LE
Sbjct: 52 SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALE 111
Query: 235 NNALGPQFPKVG--KKLVTMILSKNKFRS-AIPAEVSSYYQLQRLDLSSNR 282
N + +G K L + ++ N +S +P S+ L+ LDLSSN+
Sbjct: 112 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 162
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 9/42 (21%)
Query: 734 RCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISP 775
RCL P+ RPS+E++L D W +E P++P
Sbjct: 266 RCLAPKPSSRPSLEEIL---------LDPWMQTPAEDVPLNP 298
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,957,140
Number of Sequences: 62578
Number of extensions: 823947
Number of successful extensions: 2973
Number of sequences better than 100.0: 638
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 608
Number of HSP's that attempted gapping in prelim test: 2365
Number of HSP's gapped (non-prelim): 818
length of query: 786
length of database: 14,973,337
effective HSP length: 107
effective length of query: 679
effective length of database: 8,277,491
effective search space: 5620416389
effective search space used: 5620416389
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)