Query 003926
Match_columns 786
No_of_seqs 740 out of 4891
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 08:29:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 8.3E-54 2.8E-58 457.4 18.2 257 477-758 41-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 6.2E-54 2.1E-58 452.2 16.0 254 477-755 13-286 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 1.3E-53 4.5E-58 451.6 18.0 252 478-754 27-302 (308)
4 3omv_A RAF proto-oncogene seri 100.0 7.4E-53 2.5E-57 443.9 20.1 256 476-757 35-299 (307)
5 4fih_A Serine/threonine-protei 100.0 5.6E-52 1.9E-56 442.5 15.9 254 477-757 74-329 (346)
6 4b9d_A Serine/threonine-protei 100.0 5.7E-52 1.9E-56 443.2 15.2 257 477-759 24-284 (350)
7 3fpq_A Serine/threonine-protei 100.0 3.6E-51 1.2E-55 427.9 14.9 255 480-757 29-288 (290)
8 4fie_A Serine/threonine-protei 100.0 1E-50 3.6E-55 443.3 16.7 255 476-757 150-406 (423)
9 3hyh_A Carbon catabolite-derep 100.0 2.1E-50 7.3E-55 418.3 18.0 252 477-758 13-269 (275)
10 4ase_A Vascular endothelial gr 100.0 7E-51 2.4E-55 438.3 14.0 265 468-756 55-345 (353)
11 3hmm_A TGF-beta receptor type- 100.0 2.8E-50 9.4E-55 427.1 17.5 263 478-757 4-296 (303)
12 4g3f_A NF-kappa-beta-inducing 100.0 2.5E-50 8.4E-55 428.7 16.0 251 477-758 58-316 (336)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.6E-50 8.8E-55 423.3 14.7 249 477-754 32-287 (311)
14 3ubd_A Ribosomal protein S6 ki 100.0 3E-50 1E-54 422.9 9.8 253 477-758 24-288 (304)
15 4g31_A Eukaryotic translation 100.0 3.4E-48 1.2E-52 409.1 16.2 260 477-756 5-284 (299)
16 4b99_A Mitogen-activated prote 100.0 2.3E-46 8E-51 410.1 17.1 274 477-758 54-351 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.3E-45 7.8E-50 398.0 16.1 266 474-757 18-358 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 4.3E-45 1.5E-49 419.7 14.2 257 476-756 156-415 (573)
19 3v5w_A G-protein coupled recep 100.0 1.1E-44 3.9E-49 412.6 16.5 256 476-758 188-456 (689)
20 2qkw_B Protein kinase; three-h 100.0 4.6E-44 1.6E-48 384.4 17.7 285 466-762 28-319 (321)
21 3uim_A Brassinosteroid insensi 100.0 2.1E-43 7.1E-48 380.1 17.9 283 464-755 17-308 (326)
22 1ogq_A PGIP-2, polygalacturona 100.0 5.7E-43 2E-47 374.1 17.4 290 27-354 2-302 (313)
23 2c30_A Serine/threonine-protei 100.0 4E-42 1.4E-46 369.1 20.0 266 465-757 23-300 (321)
24 3fxz_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46 365.6 17.7 255 476-757 19-275 (297)
25 3fe3_A MAP/microtubule affinit 100.0 3.5E-42 1.2E-46 370.1 15.7 253 476-757 14-270 (328)
26 3zgw_A Maternal embryonic leuc 100.0 9.8E-42 3.4E-46 368.8 17.5 254 476-758 9-267 (347)
27 2nru_A Interleukin-1 receptor- 100.0 3.3E-41 1.1E-45 359.7 20.9 277 465-755 13-303 (307)
28 2yab_A Death-associated protei 100.0 1.5E-41 5.1E-46 369.7 17.7 256 476-756 11-277 (361)
29 1o6l_A RAC-beta serine/threoni 100.0 2.6E-41 9E-46 364.4 19.5 253 476-757 4-266 (337)
30 1tki_A Titin; serine kinase, m 100.0 1.5E-41 5E-46 364.5 16.3 258 476-758 4-264 (321)
31 3p86_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46 362.5 15.1 258 472-754 32-294 (309)
32 2y0a_A Death-associated protei 100.0 3.5E-41 1.2E-45 362.6 17.4 255 477-756 11-276 (326)
33 2bdw_A Hypothetical protein K1 100.0 6.2E-41 2.1E-45 365.7 18.9 256 476-756 28-289 (362)
34 4fr4_A YANK1, serine/threonine 100.0 6.1E-41 2.1E-45 367.0 18.4 258 477-760 15-280 (384)
35 2psq_A Fibroblast growth facto 100.0 6.9E-41 2.4E-45 366.6 18.8 257 476-757 80-363 (370)
36 4euu_A Serine/threonine-protei 100.0 1.5E-40 5.3E-45 356.6 21.1 273 477-757 9-308 (319)
37 3s95_A LIMK-1, LIM domain kina 100.0 3.8E-41 1.3E-45 359.7 16.2 254 477-757 10-281 (310)
38 3niz_A Rhodanese family protei 100.0 3.1E-41 1E-45 360.6 15.3 269 476-757 20-306 (311)
39 2qol_A Ephrin receptor; recept 100.0 6.3E-41 2.1E-45 367.2 17.4 255 477-758 45-309 (373)
40 2x4f_A Myosin light chain kina 100.0 5.5E-41 1.9E-45 367.5 16.8 254 481-758 93-349 (373)
41 3uc3_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45 363.1 18.9 260 476-760 19-283 (361)
42 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-41 1.1E-45 366.1 13.7 254 476-758 22-287 (353)
43 2zv2_A Calcium/calmodulin-depe 100.0 9E-41 3.1E-45 354.7 16.9 255 476-756 12-297 (298)
44 3rgz_A Protein brassinosteroid 100.0 9.6E-41 3.3E-45 400.3 18.7 325 26-357 7-382 (768)
45 1kob_A Twitchin; kinase, intra 100.0 6.3E-41 2.1E-45 368.1 15.4 258 476-757 50-310 (387)
46 4aw2_A Serine/threonine-protei 100.0 5.1E-41 1.7E-45 373.7 14.2 267 469-758 66-345 (437)
47 3c0i_A Peripheral plasma membr 100.0 6.9E-41 2.4E-45 364.0 14.8 259 477-758 24-293 (351)
48 4hcu_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 344.6 19.6 253 477-757 10-265 (269)
49 3poz_A Epidermal growth factor 100.0 1.1E-40 3.8E-45 359.0 16.0 259 477-763 15-283 (327)
50 3qd2_B Eukaryotic translation 100.0 1.1E-40 3.6E-45 359.5 15.9 261 476-756 5-330 (332)
51 1fot_A TPK1 delta, CAMP-depend 100.0 1.8E-40 6.3E-45 355.1 17.6 251 476-757 5-264 (318)
52 3kul_A Ephrin type-A receptor 100.0 1.2E-40 4.2E-45 358.2 16.3 254 477-757 49-312 (325)
53 3tki_A Serine/threonine-protei 100.0 4.8E-41 1.6E-45 361.0 13.0 258 476-759 6-269 (323)
54 4dc2_A Protein kinase C IOTA t 100.0 1.4E-40 4.7E-45 365.4 16.8 258 476-758 51-325 (396)
55 1ob3_A PFPK5, cell division co 100.0 1.9E-40 6.5E-45 350.4 16.8 267 477-756 2-285 (288)
56 2pmi_A Negative RE, cyclin-dep 100.0 2.3E-40 7.9E-45 354.8 17.7 272 476-758 4-300 (317)
57 3g33_A Cell division protein k 100.0 2.9E-40 9.8E-45 352.6 18.2 277 475-758 7-303 (308)
58 3v8s_A RHO-associated protein 100.0 8.6E-41 3E-45 369.1 14.6 262 470-757 62-335 (410)
59 1qcf_A Haematopoetic cell kina 100.0 1E-40 3.5E-45 375.5 15.5 254 473-754 184-440 (454)
60 3soa_A Calcium/calmodulin-depe 100.0 1.9E-40 6.7E-45 370.4 17.5 258 476-758 10-274 (444)
61 3f3z_A Calcium/calmodulin-depe 100.0 2.7E-40 9.4E-45 347.0 17.6 258 477-760 9-270 (277)
62 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.8E-41 3.3E-45 359.6 14.5 255 476-760 8-267 (336)
63 2y94_A 5'-AMP-activated protei 100.0 3.4E-40 1.2E-44 370.9 19.3 253 477-758 16-273 (476)
64 3l9p_A Anaplastic lymphoma kin 100.0 2.2E-40 7.7E-45 362.2 17.2 262 476-762 70-349 (367)
65 3cbl_A C-FES, proto-oncogene t 100.0 5.8E-41 2E-45 368.4 12.4 255 476-757 113-373 (377)
66 2eue_A Carbon catabolite derep 100.0 3.1E-40 1E-44 346.3 17.3 253 477-759 13-270 (275)
67 3q4u_A Activin receptor type-1 100.0 2.6E-40 8.7E-45 351.5 16.8 263 476-755 7-299 (301)
68 3soc_A Activin receptor type-2 100.0 2.2E-40 7.6E-45 355.8 16.4 267 476-758 23-318 (322)
69 1xjd_A Protein kinase C, theta 100.0 8.3E-41 2.8E-45 361.5 12.6 255 474-757 14-275 (345)
70 3p1a_A MYT1 kinase, membrane-a 100.0 4.1E-41 1.4E-45 359.6 9.5 249 477-756 57-309 (311)
71 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.4E-40 1.5E-44 356.9 17.7 250 477-757 41-299 (350)
72 4ejn_A RAC-alpha serine/threon 100.0 1.4E-40 5E-45 373.6 14.3 254 476-758 147-411 (446)
73 2i0e_A Protein kinase C-beta I 100.0 3.8E-40 1.3E-44 357.4 17.1 253 476-757 19-282 (353)
74 1k9a_A Carboxyl-terminal SRC k 100.0 4.9E-40 1.7E-44 369.4 18.4 252 476-757 192-444 (450)
75 3kex_A Receptor tyrosine-prote 100.0 2.6E-40 9.1E-45 355.7 15.4 256 477-760 13-278 (325)
76 2w4o_A Calcium/calmodulin-depe 100.0 2.2E-40 7.5E-45 359.7 14.8 257 475-757 51-311 (349)
77 3ugc_A Tyrosine-protein kinase 100.0 6.2E-41 2.1E-45 355.4 10.1 259 477-756 10-289 (295)
78 3a62_A Ribosomal protein S6 ki 100.0 3E-40 1E-44 355.5 15.5 253 476-757 16-282 (327)
79 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-39 3.7E-44 347.9 19.8 254 477-757 8-262 (307)
80 2acx_A G protein-coupled recep 100.0 2.4E-40 8.1E-45 377.0 15.5 260 476-758 183-451 (576)
81 3vhe_A Vascular endothelial gr 100.0 1.6E-40 5.4E-45 362.6 13.2 267 467-757 12-354 (359)
82 3gen_A Tyrosine-protein kinase 100.0 5.5E-40 1.9E-44 345.9 16.6 253 476-756 23-278 (283)
83 2izr_A Casein kinase I isoform 100.0 1.1E-39 3.9E-44 351.5 19.3 256 477-756 9-279 (330)
84 3o0g_A Cell division protein k 100.0 7E-40 2.4E-44 346.8 17.1 268 477-757 2-288 (292)
85 3fdn_A Serine/threonine-protei 100.0 6.4E-40 2.2E-44 344.6 16.7 255 476-760 8-266 (279)
86 3gni_B Strad alpha; kinase fol 100.0 1.9E-40 6.6E-45 366.1 13.2 273 476-759 24-341 (389)
87 3oz6_A Mitogen-activated prote 100.0 2.6E-40 8.9E-45 364.8 14.2 278 475-765 7-342 (388)
88 1opk_A P150, C-ABL, proto-onco 100.0 4.4E-40 1.5E-44 373.9 16.5 253 475-754 218-474 (495)
89 3is5_A Calcium-dependent prote 100.0 3.5E-40 1.2E-44 347.9 14.5 256 477-756 22-283 (285)
90 1luf_A Muscle-specific tyrosin 100.0 4.8E-40 1.7E-44 356.3 15.7 258 472-754 42-331 (343)
91 3kk8_A Calcium/calmodulin depe 100.0 1.1E-39 3.8E-44 343.6 17.9 258 476-758 5-268 (284)
92 3ttj_A Mitogen-activated prote 100.0 5.9E-40 2E-44 369.4 16.9 271 476-756 61-360 (464)
93 2a2a_A Death-associated protei 100.0 6.9E-40 2.4E-44 351.8 16.3 255 477-756 12-277 (321)
94 3a8x_A Protein kinase C IOTA t 100.0 9.9E-40 3.4E-44 353.6 17.5 256 477-757 9-281 (345)
95 3bhy_A Death-associated protei 100.0 1.1E-39 3.7E-44 343.5 17.4 259 477-760 5-274 (283)
96 1nxk_A MAP kinase-activated pr 100.0 5.2E-40 1.8E-44 363.2 15.5 257 477-757 61-327 (400)
97 2vd5_A DMPK protein; serine/th 100.0 1.3E-40 4.3E-45 368.0 10.5 267 468-758 52-334 (412)
98 3lxl_A Tyrosine-protein kinase 100.0 7.8E-41 2.7E-45 360.2 8.3 270 477-756 23-301 (327)
99 3tt0_A Basic fibroblast growth 100.0 1.2E-39 4.1E-44 358.6 17.6 258 476-758 68-352 (382)
100 3hko_A Calcium/calmodulin-depe 100.0 6.7E-40 2.3E-44 355.6 15.3 265 472-758 21-337 (345)
101 3lb7_A RAF proto-oncogene seri 100.0 1.7E-39 5.7E-44 346.4 17.8 256 476-757 35-299 (307)
102 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.2E-40 3.2E-44 341.3 15.4 251 476-754 7-260 (268)
103 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.3E-40 1.1E-44 370.9 12.9 252 475-754 182-436 (452)
104 4agu_A Cyclin-dependent kinase 100.0 8.5E-40 2.9E-44 349.4 15.4 268 477-757 3-290 (311)
105 3pg1_A Mitogen-activated prote 100.0 1.3E-39 4.3E-44 355.9 16.9 282 469-758 14-323 (362)
106 3e3p_A Protein kinase, putativ 100.0 1.4E-39 4.7E-44 355.3 16.9 284 470-758 16-321 (360)
107 3qup_A Tyrosine-protein kinase 100.0 4.2E-40 1.5E-44 353.7 12.6 274 473-767 19-305 (323)
108 4eqm_A Protein kinase; transfe 100.0 1.9E-39 6.4E-44 343.9 17.3 254 477-754 11-271 (294)
109 3llt_A Serine/threonine kinase 100.0 3E-40 1E-44 360.6 11.3 274 467-755 25-359 (360)
110 3ork_A Serine/threonine protei 100.0 1.1E-39 3.7E-44 348.7 15.3 262 476-758 11-280 (311)
111 3dbq_A Dual specificity protei 100.0 6.7E-40 2.3E-44 355.3 13.4 253 477-757 9-279 (343)
112 3dls_A PAS domain-containing s 100.0 3.6E-40 1.2E-44 355.9 11.2 247 476-757 23-280 (335)
113 3lij_A Calcium/calmodulin depe 100.0 3E-39 1E-43 367.7 19.4 259 476-760 36-300 (494)
114 3mtl_A Cell division protein k 100.0 4E-40 1.4E-44 354.1 11.5 269 477-758 2-288 (324)
115 2h6d_A 5'-AMP-activated protei 100.0 2.6E-39 8.8E-44 339.4 17.3 254 477-759 11-269 (276)
116 1u5q_A Serine/threonine protei 100.0 1.3E-39 4.3E-44 353.3 15.2 251 477-757 54-311 (348)
117 2r5t_A Serine/threonine-protei 100.0 1.4E-39 4.6E-44 355.6 15.4 253 476-757 37-299 (373)
118 3dtc_A Mitogen-activated prote 100.0 1.9E-39 6.6E-44 339.3 15.9 251 477-754 7-269 (271)
119 3nyv_A Calmodulin-domain prote 100.0 2.6E-39 9E-44 367.5 17.9 257 477-759 26-289 (484)
120 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.5E-39 8.5E-44 367.9 17.6 259 477-758 185-455 (543)
121 3eb0_A Putative uncharacterize 100.0 1.4E-39 5E-44 358.2 15.2 278 473-758 3-328 (383)
122 4f0f_A Serine/threonine-protei 100.0 1E-38 3.6E-43 336.8 21.0 250 477-754 19-285 (287)
123 3i6u_A CDS1, serine/threonine- 100.0 2E-39 6.8E-44 361.0 16.3 257 475-757 133-405 (419)
124 2y7j_A Phosphorylase B kinase 100.0 3.8E-39 1.3E-43 352.2 18.2 261 471-756 88-364 (365)
125 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.2E-40 3.2E-44 352.1 12.9 269 475-757 32-324 (329)
126 3mwu_A Calmodulin-domain prote 100.0 5.5E-39 1.9E-43 364.9 19.8 257 476-758 21-283 (486)
127 2qr7_A Ribosomal protein S6 ki 100.0 8.2E-40 2.8E-44 353.8 12.4 256 476-757 21-283 (342)
128 2jam_A Calcium/calmodulin-depe 100.0 4.2E-39 1.5E-43 342.9 17.5 255 477-757 9-267 (304)
129 2ac3_A MAP kinase-interacting 100.0 2E-39 6.8E-44 347.3 15.0 259 477-757 12-301 (316)
130 2zmd_A Dual specificity protei 100.0 1.5E-39 5E-44 358.5 14.3 253 477-757 56-326 (390)
131 3rp9_A Mitogen-activated prote 100.0 2.3E-39 7.8E-44 365.4 16.1 273 477-758 53-403 (458)
132 2clq_A Mitogen-activated prote 100.0 3.8E-39 1.3E-43 341.5 16.5 256 478-756 23-283 (295)
133 3lm5_A Serine/threonine-protei 100.0 9.6E-40 3.3E-44 351.6 12.1 264 471-757 22-293 (327)
134 3q5i_A Protein kinase; CDPK, m 100.0 5.2E-39 1.8E-43 366.6 18.9 257 476-758 35-308 (504)
135 3t9t_A Tyrosine-protein kinase 100.0 7E-39 2.4E-43 334.2 18.3 252 477-756 8-262 (267)
136 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-39 4.6E-44 348.2 13.1 257 475-756 21-309 (314)
137 4aaa_A Cyclin-dependent kinase 100.0 2.1E-39 7.1E-44 349.7 14.7 269 476-757 24-312 (331)
138 1rjb_A FL cytokine receptor; k 100.0 2.8E-39 9.4E-44 350.6 15.6 257 475-756 43-332 (344)
139 3eqc_A Dual specificity mitoge 100.0 4.1E-39 1.4E-43 351.6 16.8 268 477-760 33-333 (360)
140 4eut_A Serine/threonine-protei 100.0 2.8E-39 9.5E-44 357.4 15.6 272 477-756 9-307 (396)
141 1mp8_A Focal adhesion kinase 1 100.0 4.1E-39 1.4E-43 338.9 15.9 254 476-757 14-275 (281)
142 1mqb_A Ephrin type-A receptor 100.0 1.2E-38 4.1E-43 343.9 19.9 259 477-762 44-313 (333)
143 3kmu_A ILK, integrin-linked ki 100.0 5.3E-39 1.8E-43 335.7 16.7 253 477-755 10-267 (271)
144 3nsz_A CK II alpha, casein kin 100.0 2.4E-39 8.2E-44 349.0 14.3 265 477-758 36-326 (330)
145 2ozo_A Tyrosine-protein kinase 100.0 5.9E-39 2E-43 373.3 18.6 244 484-755 343-595 (613)
146 3kn6_A Ribosomal protein S6 ki 100.0 1.4E-39 4.8E-44 349.8 12.4 250 482-756 16-275 (325)
147 2h8h_A Proto-oncogene tyrosine 100.0 1E-39 3.4E-44 374.4 11.8 252 475-754 265-519 (535)
148 3op5_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 352.3 16.0 266 476-757 34-328 (364)
149 2xrw_A Mitogen-activated prote 100.0 8E-39 2.7E-43 350.6 18.0 272 476-757 24-324 (371)
150 1j1b_A Glycogen synthase kinas 100.0 2.5E-39 8.6E-44 360.2 14.1 272 478-758 55-343 (420)
151 2vgo_A Serine/threonine-protei 100.0 6.9E-39 2.4E-43 337.7 16.6 252 477-758 14-269 (284)
152 1vzo_A Ribosomal protein S6 ki 100.0 3.2E-39 1.1E-43 351.5 14.4 257 476-758 53-328 (355)
153 4e7w_A Glycogen synthase kinas 100.0 1.8E-39 6.1E-44 358.5 12.6 274 477-758 40-328 (394)
154 2owb_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 348.8 14.1 254 476-758 40-298 (335)
155 3c1x_A Hepatocyte growth facto 100.0 3.7E-39 1.3E-43 352.8 14.8 253 478-756 90-353 (373)
156 3a7i_A MST3 kinase, serine/thr 100.0 9.8E-39 3.4E-43 339.9 17.7 253 477-758 22-277 (303)
157 1t46_A HOMO sapiens V-KIT hard 100.0 4.4E-39 1.5E-43 344.0 14.8 256 476-756 22-305 (313)
158 1csn_A Casein kinase-1; phosph 100.0 1.5E-38 5.1E-43 337.4 18.8 257 477-756 10-281 (298)
159 1ua2_A CAK, cell division prot 100.0 5.3E-39 1.8E-43 348.7 15.5 270 475-757 8-297 (346)
160 2wtk_C Serine/threonine-protei 100.0 1.9E-38 6.5E-43 337.8 19.5 257 476-758 4-270 (305)
161 3mi9_A Cell division protein k 100.0 1.1E-38 3.7E-43 347.0 17.8 275 477-757 17-317 (351)
162 1qpc_A LCK kinase; alpha beta 100.0 2.6E-39 8.9E-44 339.9 12.4 253 475-755 11-266 (279)
163 3lxp_A Non-receptor tyrosine-p 100.0 2.5E-39 8.4E-44 347.0 12.4 255 479-756 33-308 (318)
164 2pvf_A Fibroblast growth facto 100.0 5.8E-39 2E-43 346.7 15.3 258 476-758 34-318 (334)
165 2rku_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 341.1 13.9 252 477-757 15-271 (294)
166 4fvq_A Tyrosine-protein kinase 100.0 4.3E-39 1.5E-43 340.1 13.8 246 477-754 8-271 (289)
167 2j7t_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 341.5 14.6 257 476-757 18-281 (302)
168 1p4o_A Insulin-like growth fac 100.0 1.8E-39 6E-44 348.7 10.8 260 470-754 18-295 (322)
169 2w5a_A Serine/threonine-protei 100.0 9.2E-40 3.2E-44 343.3 8.4 259 476-757 5-273 (279)
170 3byv_A Rhoptry kinase; malaria 100.0 2.7E-40 9.3E-45 363.2 4.3 257 476-759 72-367 (377)
171 3lzb_A Epidermal growth factor 100.0 1E-38 3.6E-43 343.4 16.6 256 477-760 15-280 (327)
172 3cc6_A Protein tyrosine kinase 100.0 5.8E-39 2E-43 337.7 14.2 257 476-760 11-275 (281)
173 1cm8_A Phosphorylated MAP kina 100.0 8.7E-39 3E-43 349.5 16.1 270 476-757 24-313 (367)
174 3cok_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 339.0 12.1 254 476-757 10-268 (278)
175 4e5w_A Tyrosine-protein kinase 100.0 1.9E-39 6.4E-44 345.1 10.3 257 478-755 22-299 (302)
176 3pfq_A PKC-B, PKC-beta, protei 100.0 8.1E-39 2.8E-43 375.6 16.7 255 475-758 339-604 (674)
177 1fvr_A Tyrosine-protein kinase 100.0 1.4E-38 4.7E-43 342.6 17.1 259 477-760 25-302 (327)
178 3kfa_A Tyrosine-protein kinase 100.0 5E-39 1.7E-43 339.4 13.4 255 475-756 11-269 (288)
179 1t4h_A Serine/threonine-protei 100.0 9.5E-39 3.2E-43 337.7 15.4 256 479-757 28-288 (290)
180 3fme_A Dual specificity mitoge 100.0 3.3E-39 1.1E-43 341.0 11.6 259 476-759 6-274 (290)
181 2yfx_A Tyrosine-protein kinase 100.0 2E-38 6.9E-43 341.4 17.7 262 476-762 29-308 (327)
182 3gxj_A TGF-beta receptor type- 100.0 1.4E-39 4.6E-44 346.2 8.4 260 477-754 3-293 (303)
183 1blx_A Cyclin-dependent kinase 100.0 1.1E-38 3.9E-43 343.0 15.6 276 475-757 9-302 (326)
184 3n9x_A Phosphotransferase; mal 100.0 4.2E-39 1.4E-43 359.9 12.7 274 476-758 25-368 (432)
185 3kvw_A DYRK2, dual specificity 100.0 4.2E-39 1.4E-43 359.3 12.5 269 476-759 96-416 (429)
186 4fl3_A Tyrosine-protein kinase 100.0 1.4E-38 4.7E-43 371.1 17.1 243 483-754 375-627 (635)
187 3og7_A AKAP9-BRAF fusion prote 100.0 1.6E-38 5.4E-43 335.9 15.9 254 476-755 23-285 (289)
188 3com_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 337.1 18.8 256 475-757 27-284 (314)
189 2ycf_A Serine/threonine-protei 100.0 1E-38 3.6E-43 342.8 14.5 255 476-756 9-279 (322)
190 1phk_A Phosphorylase kinase; g 100.0 7.6E-39 2.6E-43 339.7 12.9 258 476-758 16-290 (298)
191 2yex_A Serine/threonine-protei 100.0 9.1E-39 3.1E-43 335.1 13.3 256 476-757 6-267 (276)
192 3brb_A Proto-oncogene tyrosine 100.0 1.8E-38 6.3E-43 339.4 15.9 264 473-756 30-306 (313)
193 3rgf_A Cyclin-dependent kinase 100.0 1.4E-38 4.8E-43 353.0 15.4 265 482-757 26-339 (405)
194 2r3i_A Cell division protein k 100.0 3.3E-38 1.1E-42 335.0 17.6 268 477-756 3-288 (299)
195 2vwi_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 340.1 13.0 267 475-758 13-294 (303)
196 3mdy_A Bone morphogenetic prot 100.0 6.5E-38 2.2E-42 338.6 20.1 267 475-758 35-331 (337)
197 1u59_A Tyrosine-protein kinase 100.0 2E-38 7E-43 334.7 15.7 251 478-756 10-270 (287)
198 3an0_A Dual specificity mitoge 100.0 5.5E-39 1.9E-43 347.7 11.6 261 475-760 49-319 (340)
199 1x8b_A WEE1HU, WEE1-like prote 100.0 6.3E-39 2.2E-43 338.2 11.5 252 476-758 10-286 (289)
200 2xir_A Vascular endothelial gr 100.0 1.4E-38 4.9E-43 340.5 14.4 266 468-757 18-309 (316)
201 2v62_A Serine/threonine-protei 100.0 2.4E-38 8.1E-43 343.4 16.2 261 477-754 37-324 (345)
202 2pml_X PFPK7, Ser/Thr protein 100.0 6.9E-39 2.3E-43 348.1 11.9 269 476-757 30-328 (348)
203 2i6l_A Mitogen-activated prote 100.0 1.4E-38 4.7E-43 341.1 13.8 273 477-757 11-311 (320)
204 2wei_A Calmodulin-domain prote 100.0 5E-38 1.7E-42 331.7 17.8 257 476-758 21-283 (287)
205 3qyz_A Mitogen-activated prote 100.0 1.7E-38 5.7E-43 347.3 14.5 273 476-758 26-320 (364)
206 2wqm_A Serine/threonine-protei 100.0 8.4E-38 2.9E-42 333.8 19.4 264 477-765 32-301 (310)
207 2a19_B Interferon-induced, dou 100.0 1.6E-38 5.4E-43 334.6 13.6 254 476-757 10-273 (284)
208 2h34_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 334.2 18.8 253 476-754 33-292 (309)
209 2i1m_A Macrophage colony-stimu 100.0 1.1E-38 3.9E-43 344.2 12.7 259 474-757 43-325 (333)
210 1byg_A CSK, protein (C-termina 100.0 1.5E-38 5E-43 334.1 13.0 252 476-757 20-272 (278)
211 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-38 4.2E-43 342.8 12.6 270 468-757 15-292 (326)
212 3q60_A ROP5B; pseudokinase, tr 100.0 2.6E-39 8.8E-44 354.7 7.2 268 477-760 62-361 (371)
213 4exu_A Mitogen-activated prote 100.0 4E-38 1.4E-42 345.1 16.5 271 476-758 41-330 (371)
214 3ll6_A Cyclin G-associated kin 100.0 1.6E-38 5.6E-43 343.1 13.2 261 476-758 27-308 (337)
215 2fst_X Mitogen-activated prote 100.0 8.8E-39 3E-43 349.2 11.0 270 477-757 29-317 (367)
216 2w1i_A JAK2; chromosomal rearr 100.0 8.7E-39 3E-43 344.1 10.7 260 477-757 41-321 (326)
217 3uzp_A CKI-delta, CKID, casein 100.0 7.1E-38 2.4E-42 331.8 17.4 256 476-757 8-279 (296)
218 3f66_A Hepatocyte growth facto 100.0 7.3E-38 2.5E-42 332.2 17.4 254 477-756 25-289 (298)
219 1xbb_A Tyrosine-protein kinase 100.0 2.2E-38 7.6E-43 335.1 13.3 250 476-754 15-275 (291)
220 4hgt_A Casein kinase I isoform 100.0 5.8E-38 2E-42 332.4 16.2 257 475-757 7-279 (296)
221 2buj_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42 337.8 14.0 258 476-754 28-302 (317)
222 4eco_A Uncharacterized protein 100.0 1.1E-37 3.7E-42 365.5 19.2 312 30-357 29-471 (636)
223 1b6c_B TGF-B superfamily recep 100.0 1.4E-37 4.7E-42 336.9 18.2 264 473-757 38-335 (342)
224 3g2f_A Bone morphogenetic prot 100.0 4.5E-38 1.5E-42 339.9 14.2 271 476-765 12-322 (336)
225 2jii_A Serine/threonine-protei 100.0 8.6E-38 3E-42 340.0 16.3 258 477-757 42-335 (352)
226 3pls_A Macrophage-stimulating 100.0 1.6E-37 5.6E-42 329.4 18.0 252 479-756 23-285 (298)
227 2b9h_A MAP kinase FUS3, mitoge 100.0 4E-38 1.4E-42 342.7 13.3 272 476-757 10-311 (353)
228 2vx3_A Dual specificity tyrosi 100.0 9.7E-38 3.3E-42 343.5 16.0 270 475-757 52-378 (382)
229 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-37 4.8E-42 340.1 17.1 247 475-754 63-335 (365)
230 3coi_A Mitogen-activated prote 100.0 1.3E-37 4.3E-42 338.8 16.3 269 477-758 24-312 (353)
231 1z57_A Dual specificity protei 100.0 9.3E-38 3.2E-42 337.4 14.9 266 477-757 14-334 (339)
232 3sv0_A Casein kinase I-like; t 100.0 4.9E-37 1.7E-41 345.8 20.6 259 476-756 6-276 (483)
233 1wak_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 346.7 12.8 271 476-756 36-396 (397)
234 4ecn_A Leucine-rich repeat pro 100.0 3.1E-37 1.1E-41 368.0 19.4 312 28-357 266-711 (876)
235 1zy4_A Serine/threonine-protei 100.0 8.6E-38 2.9E-42 332.0 12.7 261 476-757 5-289 (303)
236 3aln_A Dual specificity mitoge 100.0 8.3E-38 2.8E-42 336.5 12.6 265 476-760 21-294 (327)
237 3cek_A Dual specificity protei 100.0 3.8E-38 1.3E-42 337.0 9.2 259 471-757 22-298 (313)
238 1u46_A ACK-1, activated CDC42 100.0 8.9E-38 3E-42 330.2 11.9 253 477-756 18-282 (291)
239 3fhr_A MAP kinase-activated pr 100.0 2.2E-37 7.4E-42 334.5 15.0 263 476-758 27-294 (336)
240 2rio_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41 344.9 15.1 253 479-756 17-300 (434)
241 2eu9_A Dual specificity protei 100.0 3.2E-37 1.1E-41 335.5 14.4 268 477-759 19-341 (355)
242 2j0j_A Focal adhesion kinase 1 100.0 4.4E-37 1.5E-41 359.7 15.7 255 474-756 387-649 (656)
243 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.3E-37 1.1E-41 330.5 12.0 254 472-754 28-298 (319)
244 2dyl_A Dual specificity mitoge 100.0 1.5E-36 5.1E-41 325.1 16.7 259 476-758 24-290 (318)
245 3p23_A Serine/threonine-protei 100.0 3.2E-37 1.1E-41 343.9 10.2 251 477-756 24-288 (432)
246 3qa8_A MGC80376 protein; kinas 100.0 2E-37 7E-42 356.0 8.7 276 477-758 14-304 (676)
247 1q8y_A SR protein kinase; tran 100.0 1E-36 3.4E-41 334.2 13.7 272 477-758 19-340 (373)
248 3a99_A Proto-oncogene serine/t 100.0 2.1E-37 7.3E-42 332.2 7.9 249 474-758 40-300 (320)
249 3rgz_A Protein brassinosteroid 100.0 1.3E-35 4.3E-40 355.9 21.6 261 100-360 411-721 (768)
250 2iwi_A Serine/threonine-protei 100.0 9.1E-37 3.1E-41 326.1 9.9 249 473-757 27-289 (312)
251 3m2w_A MAP kinase-activated pr 100.0 8E-36 2.7E-40 316.8 14.5 241 477-758 17-263 (299)
252 3uqc_A Probable conserved tran 100.0 1.8E-35 6.2E-40 311.6 15.7 230 477-758 31-265 (286)
253 3dzo_A Rhoptry kinase domain; 100.0 3E-36 1E-40 334.6 5.3 256 476-758 77-370 (413)
254 2pzi_A Probable serine/threoni 100.0 6.3E-35 2.1E-39 344.7 15.1 243 477-756 80-325 (681)
255 1ogq_A PGIP-2, polygalacturona 100.0 2.7E-34 9.3E-39 306.8 11.4 231 107-360 50-285 (313)
256 4fcg_A Uncharacterized protein 100.0 8E-34 2.7E-38 305.1 13.9 265 28-331 24-313 (328)
257 3v47_A TOLL-like receptor 5B a 100.0 1.8E-32 6.1E-37 308.9 24.1 274 75-357 31-385 (455)
258 2vuw_A Serine/threonine-protei 100.0 1.3E-33 4.3E-38 305.1 12.9 253 477-755 20-335 (336)
259 2id5_A Lingo-1, leucine rich r 100.0 2.2E-31 7.4E-36 301.9 22.8 274 75-357 33-310 (477)
260 3oja_B Anopheles plasmodium-re 100.0 9.8E-31 3.3E-35 304.6 24.0 249 103-357 71-338 (597)
261 3v47_A TOLL-like receptor 5B a 100.0 2.6E-30 8.8E-35 291.2 21.4 252 107-358 30-362 (455)
262 3o6n_A APL1; leucine-rich repe 100.0 3.8E-30 1.3E-34 283.7 22.0 249 103-357 65-332 (390)
263 4eco_A Uncharacterized protein 100.0 8.6E-31 2.9E-35 306.9 17.6 280 73-357 205-527 (636)
264 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-29 4E-34 296.5 24.2 282 75-357 33-511 (606)
265 3t6q_A CD180 antigen; protein- 100.0 1.2E-29 4.2E-34 296.4 23.8 272 75-357 255-537 (606)
266 4g8a_A TOLL-like receptor 4; l 100.0 3.2E-29 1.1E-33 294.2 25.2 302 48-359 12-558 (635)
267 3j0a_A TOLL-like receptor 5; m 100.0 3.3E-29 1.1E-33 303.3 24.6 285 73-357 23-376 (844)
268 3t6q_A CD180 antigen; protein- 100.0 2.1E-29 7.3E-34 294.4 21.9 273 75-357 34-364 (606)
269 1xku_A Decorin; proteoglycan, 100.0 1.6E-28 5.4E-33 264.4 26.0 246 107-356 52-306 (330)
270 2ft3_A Biglycan; proteoglycan, 100.0 1.3E-28 4.5E-33 265.2 25.2 245 107-356 54-307 (332)
271 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-28 4.1E-33 265.5 24.8 264 75-354 55-331 (332)
272 4fcg_A Uncharacterized protein 100.0 4.8E-29 1.6E-33 267.8 20.1 228 105-357 79-315 (328)
273 4ecn_A Leucine-rich repeat pro 100.0 3.7E-29 1.3E-33 298.5 21.0 262 74-352 491-785 (876)
274 1xku_A Decorin; proteoglycan, 100.0 2.2E-28 7.6E-33 263.2 25.1 265 75-354 53-330 (330)
275 2id5_A Lingo-1, leucine rich r 100.0 1.4E-28 4.8E-33 278.8 24.4 252 107-358 32-287 (477)
276 2z81_A CD282 antigen, TOLL-lik 100.0 1.8E-29 6.1E-34 291.4 16.2 157 75-240 27-210 (549)
277 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-28 4.6E-33 291.6 23.9 275 74-357 25-343 (680)
278 2z7x_B TOLL-like receptor 1, v 100.0 6.7E-29 2.3E-33 284.6 20.3 109 246-356 323-434 (520)
279 3j0a_A TOLL-like receptor 5; m 100.0 1.1E-28 3.9E-33 298.6 22.1 247 107-358 266-562 (844)
280 3vq2_A TLR4, TOLL-like recepto 100.0 2.4E-28 8.2E-33 285.4 23.9 284 74-357 56-535 (606)
281 3zyi_A Leucine-rich repeat-con 100.0 3.2E-28 1.1E-32 273.7 23.1 226 107-333 75-304 (452)
282 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.6E-28 1.2E-32 281.2 23.6 265 75-356 53-463 (562)
283 3zyj_A Leucine-rich repeat-con 100.0 4.9E-28 1.7E-32 271.3 23.3 225 107-332 64-292 (440)
284 2z7x_B TOLL-like receptor 1, v 100.0 1E-28 3.4E-33 283.1 18.0 267 74-357 21-388 (520)
285 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.5E-28 8.6E-33 282.5 21.2 150 77-243 34-188 (562)
286 3oja_A Leucine-rich immune mol 100.0 3.4E-31 1.2E-35 300.0 -3.4 216 105-355 32-249 (487)
287 2z80_A TOLL-like receptor 2, v 100.0 2.1E-28 7.2E-33 266.0 18.2 250 107-357 52-315 (353)
288 2z63_A TOLL-like receptor 4, v 100.0 6.5E-28 2.2E-32 279.6 23.2 284 75-358 29-509 (570)
289 3oja_B Anopheles plasmodium-re 100.0 4.1E-28 1.4E-32 282.5 21.5 246 101-357 93-359 (597)
290 2z66_A Variable lymphocyte rec 100.0 1.7E-28 5.7E-33 261.2 16.3 227 107-334 28-263 (306)
291 1ziw_A TOLL-like receptor 3; i 100.0 1.8E-27 6.1E-32 282.0 23.5 275 74-357 49-367 (680)
292 3o6n_A APL1; leucine-rich repe 100.0 2.2E-27 7.6E-32 261.6 21.6 248 101-357 87-353 (390)
293 1wwl_A Monocyte differentiatio 100.0 4.8E-30 1.6E-34 273.9 0.0 263 49-333 21-310 (312)
294 1ozn_A Reticulon 4 receptor; N 99.9 5.6E-27 1.9E-31 246.7 22.7 234 68-334 5-240 (285)
295 2z80_A TOLL-like receptor 2, v 99.9 1.5E-27 5.3E-32 259.1 15.0 274 51-337 22-319 (353)
296 2z66_A Variable lymphocyte rec 99.9 3.3E-27 1.1E-31 251.1 17.2 243 111-357 11-262 (306)
297 3bz5_A Internalin-J, INLJ; leu 99.9 2.3E-26 7.8E-31 258.1 24.4 252 74-357 42-300 (457)
298 2z81_A CD282 antigen, TOLL-lik 99.9 4.2E-27 1.4E-31 271.5 18.5 139 107-245 26-167 (549)
299 3zyi_A Leucine-rich repeat-con 99.9 1.8E-26 6.3E-31 259.4 23.0 242 111-357 58-304 (452)
300 1wwl_A Monocyte differentiatio 99.9 6.9E-29 2.3E-33 264.9 2.7 245 103-357 39-310 (312)
301 3bz5_A Internalin-J, INLJ; leu 99.9 5.5E-26 1.9E-30 255.0 24.3 233 74-336 64-303 (457)
302 3zyj_A Leucine-rich repeat-con 99.9 4.4E-26 1.5E-30 255.4 22.9 241 112-357 48-293 (440)
303 4fmz_A Internalin; leucine ric 99.9 1E-25 3.5E-30 244.1 24.7 259 74-357 66-325 (347)
304 4g8a_A TOLL-like receptor 4; l 99.9 4.5E-26 1.6E-30 267.3 23.5 252 107-358 52-533 (635)
305 4fmz_A Internalin; leucine ric 99.9 6.8E-26 2.3E-30 245.5 22.1 258 74-356 88-346 (347)
306 1o6v_A Internalin A; bacterial 99.9 1.8E-25 6.1E-30 252.4 23.6 256 74-357 68-345 (466)
307 1ozn_A Reticulon 4 receptor; N 99.9 2.8E-25 9.6E-30 233.7 22.9 224 110-357 14-239 (285)
308 4azs_A Methyltransferase WBDD; 99.9 1.6E-27 5.4E-32 273.8 5.3 182 484-682 241-435 (569)
309 1o6v_A Internalin A; bacterial 99.9 3.5E-25 1.2E-29 250.0 23.9 256 74-357 46-323 (466)
310 2o6q_A Variable lymphocyte rec 99.9 3.8E-25 1.3E-29 230.7 21.3 215 56-307 2-217 (270)
311 1jl5_A Outer protein YOPM; leu 99.9 6E-25 2.1E-29 246.3 23.3 225 107-357 131-371 (454)
312 3g06_A SSPH2 (leucine-rich rep 99.9 1.8E-25 6.2E-30 258.3 19.1 272 49-357 12-298 (622)
313 1jl5_A Outer protein YOPM; leu 99.9 2E-24 6.8E-29 242.1 26.3 223 107-357 111-351 (454)
314 2z62_A TOLL-like receptor 4, v 99.9 6.7E-25 2.3E-29 229.7 19.7 208 107-336 28-241 (276)
315 3o53_A Protein LRIM1, AGAP0063 99.9 6.1E-27 2.1E-31 250.4 3.4 241 103-357 30-277 (317)
316 3rfs_A Internalin B, repeat mo 99.9 8.8E-25 3E-29 228.2 16.2 207 103-341 37-244 (272)
317 2z63_A TOLL-like receptor 4, v 99.9 2.4E-24 8.1E-29 249.6 21.5 244 108-357 29-339 (570)
318 3o53_A Protein LRIM1, AGAP0063 99.9 1.2E-25 4E-30 240.4 8.6 236 108-356 11-250 (317)
319 2o6q_A Variable lymphocyte rec 99.9 1.5E-23 5E-28 218.7 24.3 203 108-334 17-220 (270)
320 3oja_A Leucine-rich immune mol 99.9 2.2E-25 7.6E-30 252.3 11.1 195 130-357 33-228 (487)
321 2z62_A TOLL-like receptor 4, v 99.9 1.2E-23 4.1E-28 220.1 20.6 221 113-357 13-238 (276)
322 1p9a_G Platelet glycoprotein I 99.9 2.7E-23 9.3E-28 218.8 21.1 203 102-332 5-208 (290)
323 3en9_A Glycoprotease, O-sialog 99.9 2.6E-25 8.9E-30 253.9 5.9 181 481-685 340-538 (540)
324 3rfs_A Internalin B, repeat mo 99.9 2.4E-23 8.2E-28 217.3 18.1 205 74-319 41-246 (272)
325 1p9a_G Platelet glycoprotein I 99.9 8.6E-23 3E-27 215.0 21.0 205 126-357 5-209 (290)
326 3g06_A SSPH2 (leucine-rich rep 99.9 8E-23 2.7E-27 236.2 22.1 209 105-342 99-307 (622)
327 4glp_A Monocyte differentiatio 99.9 5.6E-24 1.9E-28 226.6 10.6 222 106-332 63-307 (310)
328 2xwt_C Thyrotropin receptor; s 99.9 6.8E-23 2.3E-27 209.5 16.2 195 108-329 32-236 (239)
329 4glp_A Monocyte differentiatio 99.9 1.3E-23 4.6E-28 223.7 10.7 200 105-309 89-308 (310)
330 2ca6_A RAN GTPase-activating p 99.9 4.9E-25 1.7E-29 242.5 -1.8 243 99-357 24-317 (386)
331 3m19_A Variable lymphocyte rec 99.9 8.4E-22 2.9E-26 203.0 20.2 109 108-216 36-144 (251)
332 3m19_A Variable lymphocyte rec 99.9 1.1E-21 3.8E-26 202.1 20.5 179 107-309 14-193 (251)
333 2xwt_C Thyrotropin receptor; s 99.9 4.1E-22 1.4E-26 203.7 16.9 197 131-353 31-236 (239)
334 1h6u_A Internalin H; cell adhe 99.9 2.7E-22 9.3E-27 213.2 15.7 194 104-333 38-231 (308)
335 2o6s_A Variable lymphocyte rec 99.9 7.6E-22 2.6E-26 197.1 16.5 162 106-271 27-189 (208)
336 3goz_A Leucine-rich repeat-con 99.9 7.6E-24 2.6E-28 230.7 1.6 245 112-356 3-297 (362)
337 3cvr_A Invasion plasmid antige 99.9 1.2E-22 4.1E-27 231.9 10.6 219 49-317 33-252 (571)
338 1z7x_W Ribonuclease inhibitor; 99.9 1.6E-24 5.5E-29 244.2 -6.2 278 75-357 86-412 (461)
339 2ast_B S-phase kinase-associat 99.9 3.7E-24 1.3E-28 230.7 -3.2 225 68-305 41-282 (336)
340 3goz_A Leucine-rich repeat-con 99.9 2.2E-23 7.5E-28 227.1 2.0 252 79-339 3-304 (362)
341 3cvr_A Invasion plasmid antige 99.9 1.4E-21 4.8E-26 223.1 16.9 187 108-342 60-253 (571)
342 2ca6_A RAN GTPase-activating p 99.9 1.2E-23 4.1E-28 231.4 -0.5 216 122-357 23-288 (386)
343 1zar_A RIO2 kinase; serine kin 99.9 1.5E-22 5.1E-27 211.9 6.1 142 469-635 82-241 (282)
344 1h6u_A Internalin H; cell adhe 99.8 8.5E-21 2.9E-25 201.6 17.5 208 112-357 24-231 (308)
345 1z7x_W Ribonuclease inhibitor; 99.8 7.4E-24 2.5E-28 238.7 -7.4 275 75-357 4-327 (461)
346 4ay9_X Follicle-stimulating ho 99.8 7.9E-21 2.7E-25 205.8 16.3 219 107-329 30-256 (350)
347 2o6s_A Variable lymphocyte rec 99.8 2.1E-20 7.1E-25 186.7 16.8 177 111-318 11-188 (208)
348 2ast_B S-phase kinase-associat 99.8 1.3E-22 4.3E-27 218.7 0.3 244 108-358 48-308 (336)
349 4b8c_D Glucose-repressible alc 99.8 2.8E-21 9.5E-26 228.6 6.7 266 28-334 129-406 (727)
350 3e6j_A Variable lymphocyte rec 99.8 1.4E-19 4.7E-24 183.5 17.6 166 50-243 10-176 (229)
351 4ay9_X Follicle-stimulating ho 99.8 1.8E-19 6.1E-24 195.2 18.0 235 111-353 13-256 (350)
352 1h6t_A Internalin B; cell adhe 99.8 2.3E-19 7.9E-24 188.9 15.5 171 105-309 44-214 (291)
353 1m9s_A Internalin B; cell inva 99.8 1.5E-19 5.1E-24 208.6 14.1 172 105-310 41-212 (605)
354 1h6t_A Internalin B; cell adhe 99.8 2.1E-19 7.2E-24 189.2 12.9 189 109-333 26-214 (291)
355 2xot_A Amphoterin-induced prot 99.8 4.2E-19 1.4E-23 193.0 14.4 156 68-238 15-175 (361)
356 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4E-24 209.5 10.4 193 106-334 20-212 (605)
357 2v9t_B SLIT homolog 2 protein 99.8 1.8E-18 6E-23 174.2 17.0 133 107-239 32-165 (220)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-18 7.3E-23 173.6 16.6 160 68-242 8-169 (220)
359 2v9t_B SLIT homolog 2 protein 99.8 1.7E-18 5.9E-23 174.3 15.8 61 156-216 33-93 (220)
360 2xot_A Amphoterin-induced prot 99.8 5.9E-19 2E-23 191.9 13.1 175 110-308 21-202 (361)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-18 7.3E-23 173.6 15.9 153 110-309 14-167 (220)
362 3e6j_A Variable lymphocyte rec 99.8 3.9E-18 1.3E-22 172.9 17.1 85 131-215 40-124 (229)
363 4b8c_D Glucose-repressible alc 99.8 1.1E-19 3.6E-24 215.1 5.3 215 107-357 173-405 (727)
364 1dce_A Protein (RAB geranylger 99.8 1.6E-21 5.4E-26 223.8 -11.5 176 129-336 347-550 (567)
365 4ezg_A Putative uncharacterize 99.8 2E-18 6.7E-23 170.7 11.8 128 105-236 42-169 (197)
366 1xeu_A Internalin C; cellular 99.8 8.8E-19 3E-23 181.5 8.5 171 105-310 17-187 (263)
367 1zth_A RIO1 serine protein kin 99.7 9.7E-19 3.3E-23 180.6 8.2 136 479-636 49-219 (258)
368 1xeu_A Internalin C; cellular 99.7 1.7E-18 5.9E-23 179.3 8.6 171 129-334 17-187 (263)
369 4ezg_A Putative uncharacterize 99.7 7.4E-18 2.5E-22 166.6 12.3 152 128-308 41-194 (197)
370 1w8a_A SLIT protein; signaling 99.7 9.8E-18 3.3E-22 164.9 10.2 111 108-218 30-141 (192)
371 3ogk_B Coronatine-insensitive 99.7 1.2E-19 4.2E-24 211.0 -4.3 254 103-357 216-527 (592)
372 1w8a_A SLIT protein; signaling 99.7 4E-17 1.4E-21 160.6 14.4 131 110-243 11-143 (192)
373 2ell_A Acidic leucine-rich nuc 99.7 6.5E-17 2.2E-21 155.3 10.7 134 105-240 22-161 (168)
374 1dce_A Protein (RAB geranylger 99.7 6.6E-20 2.3E-24 210.3 -13.5 188 152-358 346-548 (567)
375 2je0_A Acidic leucine-rich nuc 99.7 6.5E-17 2.2E-21 152.0 7.6 129 105-235 15-149 (149)
376 3ogk_B Coronatine-insensitive 99.6 6.2E-18 2.1E-22 196.5 -1.8 248 108-357 139-421 (592)
377 2ell_A Acidic leucine-rich nuc 99.6 4E-16 1.4E-20 149.8 10.3 106 130-237 23-131 (168)
378 2o6r_A Variable lymphocyte rec 99.6 1.9E-15 6.6E-20 146.3 13.7 112 107-218 28-139 (177)
379 2o6r_A Variable lymphocyte rec 99.6 3.8E-15 1.3E-19 144.2 14.7 132 109-243 9-141 (177)
380 2wfh_A SLIT homolog 2 protein 99.6 4.6E-15 1.6E-19 145.8 14.6 106 132-238 32-138 (193)
381 2je0_A Acidic leucine-rich nuc 99.6 1.1E-15 3.6E-20 143.6 8.8 126 180-327 18-148 (149)
382 2wfh_A SLIT homolog 2 protein 99.6 6.3E-15 2.1E-19 144.8 14.1 110 107-217 31-140 (193)
383 4gyi_A RIO2 kinase; protein ki 99.6 5.6E-16 1.9E-20 166.1 5.0 152 471-635 89-264 (397)
384 1ds9_A Outer arm dynein; leuci 99.6 3.3E-17 1.1E-21 162.0 -6.0 82 132-216 19-106 (198)
385 1a9n_A U2A', U2A'; complex (nu 99.6 3E-15 1E-19 144.9 7.5 132 102-238 14-152 (176)
386 1ds9_A Outer arm dynein; leuci 99.5 8.5E-17 2.9E-21 159.0 -5.6 155 151-332 14-185 (198)
387 2p1m_B Transport inhibitor res 99.5 7.8E-17 2.7E-21 187.3 -7.8 275 74-355 156-493 (594)
388 1a9n_A U2A', U2A'; complex (nu 99.5 1.5E-14 5.2E-19 139.8 9.0 40 267-307 109-152 (176)
389 2p1m_B Transport inhibitor res 99.5 2.9E-16 1E-20 182.4 -4.1 244 74-327 105-405 (594)
390 3sb4_A Hypothetical leucine ri 99.5 1.7E-14 5.8E-19 154.5 9.1 235 106-349 48-327 (329)
391 3g39_A Variable lymphocyte rec 99.5 1.2E-13 3.9E-18 132.8 12.6 106 110-218 12-117 (170)
392 2r9u_A Variable lymphocyte rec 99.5 2.4E-13 8.1E-18 131.1 12.7 104 111-217 16-119 (174)
393 2r9u_A Variable lymphocyte rec 99.4 5.3E-13 1.8E-17 128.6 12.4 106 133-241 14-120 (174)
394 3g39_A Variable lymphocyte rec 99.4 3.3E-13 1.1E-17 129.6 10.6 108 229-336 12-119 (170)
395 3sb4_A Hypothetical leucine ri 99.4 4.2E-13 1.4E-17 143.6 10.3 100 225-326 225-328 (329)
396 4fdw_A Leucine rich hypothetic 99.4 1E-11 3.5E-16 136.0 19.5 214 108-332 136-358 (401)
397 4fdw_A Leucine rich hypothetic 99.3 3.6E-11 1.2E-15 131.7 18.1 219 103-331 154-382 (401)
398 2ifg_A High affinity nerve gro 99.3 4.9E-12 1.7E-16 136.4 10.8 88 127-215 27-115 (347)
399 2ifg_A High affinity nerve gro 99.3 1.3E-11 4.4E-16 133.0 11.5 105 134-240 11-117 (347)
400 3un9_A NLR family member X1; l 99.2 8.8E-14 3E-18 151.0 -9.2 68 266-333 206-284 (372)
401 3un9_A NLR family member X1; l 99.2 9.1E-14 3.1E-18 150.9 -10.5 78 264-341 176-261 (372)
402 3tm0_A Aminoglycoside 3'-phosp 99.1 1.6E-10 5.4E-15 119.2 10.9 146 472-633 9-211 (263)
403 1nd4_A Aminoglycoside 3'-phosp 99.0 4.5E-10 1.5E-14 115.4 7.4 136 478-634 21-213 (264)
404 2ra8_A Uncharacterized protein 98.9 5E-10 1.7E-14 120.5 2.6 14 103-116 135-148 (362)
405 2ra8_A Uncharacterized protein 98.8 1.6E-09 5.3E-14 116.6 3.1 182 126-330 134-341 (362)
406 4fs7_A Uncharacterized protein 98.8 4.6E-08 1.6E-12 107.1 14.7 218 124-351 155-374 (394)
407 3dxp_A Putative acyl-COA dehyd 98.8 1.5E-08 5.2E-13 109.4 9.6 147 481-637 42-250 (359)
408 4fs7_A Uncharacterized protein 98.7 9.4E-08 3.2E-12 104.6 15.2 243 102-353 66-353 (394)
409 3rw6_A Nuclear RNA export fact 98.6 1E-10 3.6E-15 119.3 -10.7 79 152-232 167-257 (267)
410 3sg8_A APH(2'')-ID; antibiotic 98.6 9.1E-09 3.1E-13 108.4 3.6 187 482-685 25-287 (304)
411 4gt6_A Cell surface protein; l 98.5 1.7E-06 5.8E-11 94.5 17.5 245 102-354 82-368 (394)
412 3rw6_A Nuclear RNA export fact 98.5 1E-08 3.5E-13 104.6 -2.0 103 105-209 139-257 (267)
413 1io0_A Tropomodulin; LRR prote 98.4 4E-08 1.4E-12 95.2 -0.5 67 102-168 31-106 (185)
414 4gt6_A Cell surface protein; l 98.3 1.7E-05 5.7E-10 86.6 19.8 245 102-353 58-344 (394)
415 3d1u_A Putative fructosamine-3 98.3 3.6E-06 1.2E-10 87.4 12.2 76 482-568 20-98 (288)
416 1io0_A Tropomodulin; LRR prote 98.2 9.5E-08 3.2E-12 92.6 -1.2 118 122-239 27-164 (185)
417 3r70_A Aminoglycoside phosphot 98.2 4.9E-06 1.7E-10 88.0 10.6 138 478-637 38-239 (320)
418 4h09_A Hypothetical leucine ri 98.1 9E-05 3.1E-09 80.2 18.8 239 102-350 64-340 (379)
419 3tdw_A Gentamicin resistance p 97.9 2.6E-05 8.8E-10 81.8 10.1 137 482-635 24-224 (306)
420 4h09_A Hypothetical leucine ri 97.9 0.00055 1.9E-08 73.9 19.7 240 103-352 42-319 (379)
421 4gkh_A Aminoglycoside 3'-phosp 97.8 7.2E-05 2.5E-09 76.7 10.1 134 484-634 31-222 (272)
422 3ats_A Putative uncharacterize 97.7 6.1E-05 2.1E-09 80.8 8.2 82 483-568 26-121 (357)
423 3ovc_A Hygromycin-B 4-O-kinase 97.7 8.4E-05 2.9E-09 79.8 9.2 145 481-637 45-245 (362)
424 2olc_A MTR kinase, methylthior 97.5 0.00046 1.6E-08 75.1 11.5 75 482-565 35-120 (397)
425 3f7w_A Putative fructosamine-3 97.5 0.00031 1.1E-08 72.7 9.5 76 481-567 19-97 (288)
426 3e4g_A ATP synthase subunit S, 97.3 6.2E-05 2.1E-09 71.1 1.5 33 133-165 63-95 (176)
427 2q83_A YTAA protein; 2635576, 97.2 0.00075 2.6E-08 71.5 9.7 140 483-633 38-250 (346)
428 3e4g_A ATP synthase subunit S, 97.2 7.2E-05 2.4E-09 70.7 1.5 83 107-189 61-149 (176)
429 3jr1_A Putative fructosamine-3 97.0 0.0058 2E-07 63.8 12.9 138 482-631 41-232 (312)
430 2ppq_A HSK, HK, homoserine kin 96.6 0.0042 1.4E-07 65.2 8.5 165 466-634 6-216 (322)
431 2pyw_A Uncharacterized protein 96.5 0.0077 2.6E-07 65.9 10.1 76 605-681 232-312 (420)
432 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00061 2.1E-08 65.5 0.9 66 103-168 37-111 (197)
433 1zyl_A Hypothetical protein YI 96.3 0.036 1.2E-06 58.0 13.7 81 483-567 32-114 (328)
434 1pgv_A TMD-1, tropomodulin TMD 96.3 0.00075 2.6E-08 64.9 0.2 114 125-238 35-169 (197)
435 3rfe_A Platelet glycoprotein I 96.3 0.0071 2.4E-07 54.1 6.7 35 181-215 33-67 (130)
436 3rfe_A Platelet glycoprotein I 96.1 0.0045 1.5E-07 55.5 4.7 37 272-308 32-68 (130)
437 1nw1_A Choline kinase (49.2 KD 95.9 0.011 3.9E-07 64.6 7.5 72 483-567 79-159 (429)
438 3dxq_A Choline/ethanolamine ki 95.7 0.018 6.1E-07 59.7 7.6 71 482-567 23-95 (301)
439 3csv_A Aminoglycoside phosphot 95.5 0.075 2.6E-06 55.7 11.8 33 604-636 182-218 (333)
440 2qg7_A Ethanolamine kinase PV0 95.1 0.057 1.9E-06 59.4 9.4 74 482-567 113-188 (458)
441 2l2t_A Receptor tyrosine-prote 94.8 0.034 1.2E-06 38.4 4.2 33 388-420 8-40 (44)
442 2ks1_B Epidermal growth factor 94.6 0.03 1E-06 38.8 3.5 32 388-419 9-40 (44)
443 3feg_A Choline/ethanolamine ki 94.5 0.1 3.4E-06 55.9 9.2 140 483-634 56-253 (379)
444 3c5i_A Choline kinase; choline 94.4 0.039 1.3E-06 58.9 6.0 73 483-567 39-121 (369)
445 3i1a_A Spectinomycin phosphotr 93.9 0.093 3.2E-06 55.3 7.5 32 605-636 206-237 (339)
446 2yle_A Protein spire homolog 1 90.8 0.47 1.6E-05 45.8 7.0 98 565-680 33-131 (229)
447 2jwa_A Receptor tyrosine-prote 90.6 0.35 1.2E-05 33.4 4.3 27 391-418 13-39 (44)
448 3f2s_A CK, chetk-alpha, cholin 89.0 0.73 2.5E-05 49.4 7.7 29 605-633 244-278 (401)
449 3mes_A Choline kinase; malaria 88.4 0.56 1.9E-05 50.8 6.4 73 483-567 76-157 (424)
450 3cxl_A N-chimerin; SH2, RHO-GA 87.8 0.077 2.6E-06 58.5 -1.0 60 482-544 147-215 (463)
451 2k1k_A Ephrin type-A receptor 83.7 1.4 4.7E-05 29.5 3.9 26 391-416 11-37 (38)
452 1iij_A ERBB-2 receptor protein 80.7 0.54 1.9E-05 30.6 1.0 26 391-417 9-34 (35)
453 2k9y_A Ephrin type-A receptor 76.8 1.5 5.2E-05 29.8 2.5 13 390-402 13-25 (41)
454 4ann_A ESSB; membrane protein, 58.4 25 0.00086 33.6 7.6 116 530-686 42-158 (215)
455 4ano_A ESSB; membrane protein, 51.0 27 0.00093 33.5 6.5 70 552-632 60-130 (219)
456 2l9u_A Receptor tyrosine-prote 48.4 22 0.00075 22.7 3.5 25 394-418 10-34 (40)
457 2knc_B Integrin beta-3; transm 45.7 16 0.00054 28.9 3.2 8 392-399 13-20 (79)
458 2l34_A TYRO protein tyrosine k 42.3 26 0.0009 22.5 3.3 24 392-415 8-31 (33)
459 2lz0_A Uncharacterized protein 40.0 55 0.0019 26.9 6.0 45 119-164 8-52 (100)
460 2k9j_B Integrin beta-3; transm 39.2 31 0.0011 23.6 3.5 15 397-411 13-27 (43)
461 2klu_A T-cell surface glycopro 36.3 45 0.0016 24.9 4.1 17 396-412 13-29 (70)
462 2knc_A Integrin alpha-IIB; tra 35.2 71 0.0024 23.0 4.9 12 390-401 13-24 (54)
463 2lz0_A Uncharacterized protein 32.7 1E+02 0.0035 25.3 6.5 45 143-188 8-52 (100)
464 3g15_A CK, chetk-alpha, cholin 30.5 19 0.00063 38.4 1.9 30 606-635 245-280 (401)
465 2l8s_A Integrin alpha-1; trans 24.8 1.4E+02 0.0047 21.5 4.9 13 389-401 9-21 (54)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.3e-54 Score=457.44 Aligned_cols=257 Identities=23% Similarity=0.378 Sum_probs=203.7
Q ss_pred cCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------ 114 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE------ 114 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE------
Confidence 45667789999999999999864 478999999986654556789999999999999999999999975
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCC------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHA------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..|||||||++|+|.++|+.... ...++|.+++.|+.|||+||+|||+. +||||||||+|||
T Consensus 115 -~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NIL 190 (329)
T 4aoj_A 115 -GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 190 (329)
T ss_dssp -SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEE
Confidence 4568999999999999999975321 24699999999999999999999997 9999999999999
Q ss_pred ecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLK 694 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~ 694 (786)
+|+++.+||+|||+++...... ......++..|||||.+....|+.++|||||||++|||+| |++||.......+.
T Consensus 191 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~ 270 (329)
T 4aoj_A 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 270 (329)
T ss_dssp EETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH
T ss_pred ECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999999999999997653322 1233467889999999999999999999999999999999 89999876544433
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..+.. .. .+..+..++ .++.+++.+||+.||++||||+||+++|+...+
T Consensus 271 ~~i~~---g~--------~~~~p~~~~----~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 271 DCITQ---GR--------ELERPRACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHH---TC--------CCCCCTTCC----HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHc---CC--------CCCCccccc----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 32221 11 111122333 356788899999999999999999999975543
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6.2e-54 Score=452.16 Aligned_cols=254 Identities=21% Similarity=0.387 Sum_probs=206.0
Q ss_pred cCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------ 86 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE------ 86 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee------
Confidence 45677899999999999999864 478999999986654556789999999999999999999999975
Q ss_pred CCceEEEEEecCCCCChhHHhhcCC----------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGH----------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
.+..|||||||++|||.++|+... ....++|.+++.|+.|||+||+|||+. +||||||||+|||+|
T Consensus 87 -~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~ 162 (299)
T 4asz_A 87 -GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG 162 (299)
T ss_dssp -SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEEC
Confidence 456899999999999999997532 234699999999999999999999997 999999999999999
Q ss_pred CCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHH
Q 003926 621 QNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~ 696 (786)
+++.+||+|||+++....... .....++..|||||.+..+.|+.|+|||||||++|||+| |++||.......+...
T Consensus 163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 242 (299)
T 4asz_A 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 242 (299)
T ss_dssp GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999999976543322 123457788999999999999999999999999999999 8999987655444333
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.. .. . +..+..++ .++.+++.+||+.||++||||+||++.|+-
T Consensus 243 i~~---~~---~-----~~~p~~~~----~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 243 ITQ---GR---V-----LQRPRTCP----QEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHH---TC---C-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHc---CC---C-----CCCCccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 221 10 0 11122233 356788899999999999999999887763
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.3e-53 Score=451.62 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=204.5
Q ss_pred CCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
+++..+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------ 100 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK------ 100 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE------
Confidence 3455788999999999999863 468999999975543 345789999999999999999999999975
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCce
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDI 617 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NI 617 (786)
.+..+||||||++|||.++|+.... ...++|.+++.|+.|||+||+|||+. +||||||||+||
T Consensus 101 -~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NI 176 (308)
T 4gt4_A 101 -DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNV 176 (308)
T ss_dssp -SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccce
Confidence 3568999999999999999975321 23589999999999999999999997 999999999999
Q ss_pred eecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHH
Q 003926 618 LLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLL 693 (786)
Q Consensus 618 Lld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~ 693 (786)
|+|+++++||+|||+++...... ......++..|||||.+..+.|+.|+|||||||++|||+| |++||.......+
T Consensus 177 Ll~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~ 256 (308)
T 4gt4_A 177 LVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256 (308)
T ss_dssp EECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH
T ss_pred EECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999997654322 2234567889999999999999999999999999999999 8999987655444
Q ss_pred HHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 694 KNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+. .. .. +..+..++ ..+.+++.+||+.||++||||+||+++|+
T Consensus 257 ~~~i~----~~--~~-----~~~p~~~~----~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 257 VEMIR----NR--QV-----LPCPDDCP----AWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp HHHHH----TT--CC-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHH----cC--CC-----CCCcccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 33221 11 11 11122333 35678889999999999999999999985
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.4e-53 Score=443.86 Aligned_cols=256 Identities=20% Similarity=0.340 Sum_probs=200.2
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.+++...+.||+|+||+||+|++++ .||||+++..... ..++|.+|+++|++++|||||+++|+|.+ +
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--------~ 104 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--------D 104 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------S
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--------C
Confidence 4567778999999999999999763 5999999754432 34679999999999999999999998853 3
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..+||||||++|+|.++|+... ..++|.+++.|+.|||+||+|||+. +||||||||+|||+|+++.+||+|||+|
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla 179 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred eEEEEEEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCc
Confidence 4799999999999999997642 4699999999999999999999997 9999999999999999999999999999
Q ss_pred cccccc---cccccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccc
Q 003926 634 LLAENA---EKVGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADES 706 (786)
Q Consensus 634 ~~~~~~---~~~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 706 (786)
+..... .......||..|||||.+.. +.|+.|+|||||||++|||+||++||..... ..+...+. ..
T Consensus 180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~----~~-- 253 (307)
T 3omv_A 180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG----RG-- 253 (307)
T ss_dssp BC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH----TT--
T ss_pred eecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHh----cC--
Confidence 765432 22334578999999999853 4599999999999999999999999976432 22222111 11
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...+. -+.....++ ..+.+++.+||+.||++||||.||+++++..+
T Consensus 254 ~~~p~-~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 254 YASPD-LSKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCCCC-STTSCTTSC----HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCCCC-cccccccch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 00000 011222233 45678889999999999999999999997553
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.6e-52 Score=442.52 Aligned_cols=254 Identities=17% Similarity=0.338 Sum_probs=212.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
..|+..+.||+|+||+||+|+.+ +|+.||||+++.......+.+.+|+++|++++|||||++++++.+ .+..
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-------~~~~ 146 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDEL 146 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-------TTEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------CCEE
Confidence 45888899999999999999965 799999999987766667789999999999999999999999876 4679
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
|||||||++|+|.+++.+. .+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++.
T Consensus 147 ~ivmEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 219 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 219 (346)
T ss_dssp EEEECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCcee
Confidence 9999999999999999752 589999999999999999999998 999999999999999999999999999976
Q ss_pred cccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
.... ......+||..|||||.+....|+.++||||+||++|||++|++||...........+.. .. .+
T Consensus 220 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~---~~--------~~ 288 (346)
T 4fih_A 220 VSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD---NL--------PP 288 (346)
T ss_dssp CCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SS--------CC
T ss_pred cCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc---CC--------CC
Confidence 5433 334566899999999999888999999999999999999999999977654433322211 11 01
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... .......++.+++.+||++||++|||+.|+++|+||.+
T Consensus 289 ~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~ 329 (346)
T 4fih_A 289 RLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329 (346)
T ss_dssp CCS--CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred CCC--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence 000 01112235678888999999999999999999998764
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.7e-52 Score=443.19 Aligned_cols=257 Identities=15% Similarity=0.269 Sum_probs=206.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.|.+|+++|++++|||||++++++.+ .+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-------~~ 96 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-------NG 96 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TT
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-------CC
Confidence 5788999999999999999996 46999999999765432 24679999999999999999999999875 46
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|||||||++|+|.++|...+ ...+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||++
T Consensus 97 ~~yiVmEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla 172 (350)
T 4b9d_A 97 SLYIVMDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIA 172 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEE
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccc
Confidence 7999999999999999997532 34578999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+...... .....+||..|||||.+.+..|+.++||||+||++|||+||++||.......+...+ .... .
T Consensus 173 ~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i---~~~~---~---- 242 (350)
T 4b9d_A 173 RVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI---ISGS---F---- 242 (350)
T ss_dssp SCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHTC---C----
T ss_pred eeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HcCC---C----
Confidence 7664432 234457899999999999889999999999999999999999999876544333222 1111 0
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
+.....+ ..++.+++.+||++||++|||+.|+++|+|+.+..
T Consensus 243 -~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 243 -PPVSLHY----SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp -CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred -CCCCccC----CHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence 1111112 23566888899999999999999999999997643
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-51 Score=427.92 Aligned_cols=255 Identities=23% Similarity=0.336 Sum_probs=200.5
Q ss_pred CccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 480 DTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 480 ~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+..+.||+|+||+||+|+.. ++..||||++...... ..+.|.+|+++|++++|||||++++++.... ...+.+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~---~~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV---KGKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE---TTEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc---CCCcEEE
Confidence 34567999999999999965 6899999999765432 2467999999999999999999999886421 1234689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DfGl~~~ 635 (786)
||||||++|+|.+++.+. ..+++.....++.|++.||+|||+. .++||||||||+|||++. ++.+||+|||+|+.
T Consensus 106 lvmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 999999999999999763 3689999999999999999999986 234999999999999984 79999999999976
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
.... .....+||+.|||||.+. ++|+.++|||||||++|||+||++||.... ...+...+ ... .. .+
T Consensus 182 ~~~~-~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i----~~~--~~----~~ 249 (290)
T 3fpq_A 182 KRAS-FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV----TSG--VK----PA 249 (290)
T ss_dssp CCTT-SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH----TTT--CC----CG
T ss_pred CCCC-ccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHH----HcC--CC----CC
Confidence 5432 334567899999999875 579999999999999999999999996532 22222211 111 00 11
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+. .++.+++.+||++||++|||+.|+++|+||.+
T Consensus 250 ~~~~~~~----~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 250 SFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp GGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CCCccCC----HHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 1111122 24667888999999999999999999998754
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-50 Score=443.29 Aligned_cols=255 Identities=17% Similarity=0.336 Sum_probs=212.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.+.|+..+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.. .+.
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-------~~~ 222 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-------GDE 222 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-------CCE
Confidence 356888999999999999999965 699999999987766667789999999999999999999999875 467
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
+|||||||++|+|.+++... .+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 223 ~~iVmEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 223 LWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEEEEECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 99999999999999999753 589999999999999999999998 99999999999999999999999999997
Q ss_pred ccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
..... ......+||..|||||.+....|+.++|||||||++|||++|++||...........+.. ...
T Consensus 296 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~---~~~-------- 364 (423)
T 4fie_A 296 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD---NLP-------- 364 (423)
T ss_dssp ECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCC--------
T ss_pred ECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc---CCC--------
Confidence 65432 334566799999999999888999999999999999999999999977654433322211 110
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+... ........+.+++.+||++||++|||+.|+++|+||.+
T Consensus 365 ~~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~ 406 (423)
T 4fie_A 365 PRLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 406 (423)
T ss_dssp CCCS--CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred CCCc--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence 0000 00111235668888999999999999999999998764
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-50 Score=418.30 Aligned_cols=252 Identities=18% Similarity=0.284 Sum_probs=195.1
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++.... ...+.|.+|+++|++++|||||++++++.+ .
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------~ 85 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-------K 85 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-------C
Confidence 5799999999999999999995 4799999999975432 335679999999999999999999998765 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||| +|+|.+++.+. ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 86 ~~~~ivmEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGl 158 (275)
T 3hyh_A 86 DEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp SEEEEEEECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSC
T ss_pred CEEEEEEeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCC
Confidence 6799999999 68999999763 3699999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
|+............||..|+|||.+.+..| +.++||||+||++|||+||++||.......+...+.. ..
T Consensus 159 a~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~---~~------- 228 (275)
T 3hyh_A 159 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN---GV------- 228 (275)
T ss_dssp C---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TC-------
T ss_pred CeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CC-------
Confidence 977655555556789999999999887765 5799999999999999999999987655443332221 11
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+..+... ..++.+++.+||++||++|||+.|+++|+||...
T Consensus 229 --~~~p~~~----s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 229 --YTLPKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp --CCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred --CCCCCCC----CHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 0111111 2345678889999999999999999999998643
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7e-51 Score=438.27 Aligned_cols=265 Identities=20% Similarity=0.327 Sum_probs=211.4
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEecC------CcEEEEEEecccCCC-ChHHHHHHHHHHhcCCC-CCcceee
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCH-STRNFMHHIELISKLRH-RHLVSAL 539 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H-~NIv~l~ 539 (786)
..++++...++|+..+.||+|+||+||+|++.. ++.||||+++..... ..++|.+|+++|++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 445667777889999999999999999998642 468999999765432 34679999999999965 8999999
Q ss_pred eeeeeccccCCCCceEEEEEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 540 g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
|+|.+. .+..+||||||++|+|.++|+... ....++|.+++.++.|||+||+|||+. +
T Consensus 135 g~~~~~------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~ 205 (353)
T 4ase_A 135 GACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---K 205 (353)
T ss_dssp EEECCT------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred EEEEec------CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---C
Confidence 998641 345899999999999999997532 124589999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
||||||||+|||+++++.+||+|||+|+...... ......++..|||||.+..+.|+.|+|||||||++|||+| |+
T Consensus 206 iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred eecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 9999999999999999999999999997653322 2234467788999999999999999999999999999998 99
Q ss_pred CCCCCchh-HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 683 PLKSRKEV-DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 683 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+||..... +.+...+.. .. .+..+..++ .++.+++.+||+.||++||||.||++||...
T Consensus 286 ~Pf~~~~~~~~~~~~i~~----g~-------~~~~p~~~~----~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 286 SPYPGVKIDEEFCRRLKE----GT-------RMRAPDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CSSTTCCCSHHHHHHHHH----TC-------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHc----CC-------CCCCCccCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 99976442 222222211 10 111122233 3567888899999999999999999998643
No 11
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-50 Score=427.15 Aligned_cols=263 Identities=21% Similarity=0.334 Sum_probs=197.2
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHH--HHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFM--HHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~--~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+|...+.||+|+||+||+|++ +|+.||||+++... .+++. +|+..+.+++|||||+++|+|.+.. .....+
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~---~~~~~~ 76 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDN---GTWTQL 76 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC---SSSEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC---CCceEE
Confidence 455678999999999999998 48999999997543 33444 4555667899999999999997621 123468
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-----CCCccccCCCCCceeecCCCcccccCC
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
|||||||++|+|.++|+.. .++|..+++++.|+|+||+|||+.+ .++||||||||+|||+|.++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999863 5899999999999999999999862 468999999999999999999999999
Q ss_pred Ccccccccccc-----cccccccccccCccccccC------CCCcccceeehhHHHHHHHhCCCCCCCchhH--------
Q 003926 631 NLPLLAENAEK-----VGHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-------- 691 (786)
Q Consensus 631 Gl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-------- 691 (786)
|+++....... .....||..|||||.+.+. .|+.|+|||||||++|||+||++|+......
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 99976543322 1234688999999988653 3678999999999999999998776432110
Q ss_pred ---HHHHHHHHHHHhccccccccccccccccC-cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 692 ---LLKNQLQAVVTADESARRSMVDPAVNKAC-LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 692 ---~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+..... ....+|.++... ..+....+.+++.+||+.||++||||.||+++|....
T Consensus 233 ~~~~~~~~~~~~~~------~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 233 PSDPSVEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp CSSCCHHHHHHHHT------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHh------cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 00011111111 111223332221 2345667889999999999999999999999987443
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.5e-50 Score=428.65 Aligned_cols=251 Identities=16% Similarity=0.212 Sum_probs=201.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
+.|...+.||+|+||+||+|+.+ +|+.||||+++.... +.+|+++|++++|||||++++++.+ .+..
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~-------~~~~ 125 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVRE-------GPWV 125 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEE-------TTEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEE-------CCEE
Confidence 45777889999999999999964 699999999976432 2479999999999999999999875 4578
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCCccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLPL 634 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfGl~~ 634 (786)
|||||||++|+|.++|++. ..+++.....++.|++.||+|||+. +||||||||+|||++.++ .+||+|||+++
T Consensus 126 ~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~ 199 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHAL 199 (336)
T ss_dssp EEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred EEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCe
Confidence 9999999999999999763 3699999999999999999999998 999999999999999987 69999999997
Q ss_pred cccccc------ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 635 LAENAE------KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 635 ~~~~~~------~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
...... .....+||..|||||.+.+..|+.++|||||||++|||+||++||.......+...+. .... ..
T Consensus 200 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~---~~~~-~~ 275 (336)
T 4g3f_A 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA---SEPP-PI 275 (336)
T ss_dssp EC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH---HSCC-GG
T ss_pred EccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH---cCCC-Cc
Confidence 654321 1123468999999999998899999999999999999999999997654332222211 1110 00
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.++..+ ...+.+++.+||++||++|||+.|+++++....+
T Consensus 276 -----~~~~~~~----s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 276 -----REIPPSC----APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp -----GGSCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----hhcCccC----CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 1111122 2356678889999999999999999999976543
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.6e-50 Score=423.31 Aligned_cols=249 Identities=16% Similarity=0.262 Sum_probs=205.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+ .
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-------~ 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-------D 104 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 5689999999999999999995 479999999997542 3446789999999999999999999998765 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|||||||++|+|.++|.+. ..+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGl 178 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGT 178 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCC
Confidence 6799999999999999999763 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc---cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENA---EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+..... ......+||+.|||||.+.+..|+.++||||+||++|||+||++||...+...+...+. ...
T Consensus 179 a~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~---~~~----- 250 (311)
T 4aw0_A 179 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII---KLE----- 250 (311)
T ss_dssp CEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HTC-----
T ss_pred ceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---cCC-----
Confidence 9765422 22345679999999999998899999999999999999999999998765544433222 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+... ..++.+++.+||++||++|||+.|++.+.|
T Consensus 251 ----~~~p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~~~~~ 287 (311)
T 4aw0_A 251 ----YDFPEKF----FPKARDLVEKLLVLDATKRLGCEEMEGYGP 287 (311)
T ss_dssp ----CCCCTTC----CHHHHHHHHHHSCSSGGGSTTSGGGTCHHH
T ss_pred ----CCCCccc----CHHHHHHHHHHccCCHhHCcChHHHcCCHH
Confidence 0111111 234668888999999999999998654444
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3e-50 Score=422.90 Aligned_cols=253 Identities=18% Similarity=0.252 Sum_probs=201.9
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||+||+|+.. +++.||||+++.... .....+.+|+++|++++|||||++++++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------ 97 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT------ 97 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE------
Confidence 46889999999999999999852 478999999975432 234568899999999999999999999875
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+|||||++|+|.++|.+. ..+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+||
T Consensus 98 -~~~~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 170 (304)
T 3ubd_A 98 -EGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 170 (304)
T ss_dssp -TTEEEEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESS
T ss_pred -CCEEEEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccc
Confidence 46799999999999999999763 3689999999999999999999998 9999999999999999999999999
Q ss_pred Cccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+|+.... .......+||..|||||.+....|+.++||||+||++|||+||++||...+...+...+. ...
T Consensus 171 Gla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~---~~~----- 242 (304)
T 3ubd_A 171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL---KAK----- 242 (304)
T ss_dssp EEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC-----
T ss_pred ccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHH---cCC-----
Confidence 99975433 233445678999999999998899999999999999999999999998765544333221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~ 758 (786)
+..+... ..++.+++.+||++||++||| ++|+++|+||...
T Consensus 243 ----~~~p~~~----s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 243 ----LGMPQFL----SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp ----CCCCTTS----CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred ----CCCCCcC----CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 0111112 234668888999999999998 5899999998753
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.4e-48 Score=409.06 Aligned_cols=260 Identities=18% Similarity=0.353 Sum_probs=193.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc-----C
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD-----D 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~-----~ 549 (786)
++|+..+.||+|+||+||+|+.+ +|+.||||+++..... ..+.|.+|+++|++++|||||++++++.+.... .
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999964 7999999999765432 246799999999999999999999998653210 0
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
......|+|||||++|+|.+++.........++...+.++.|++.||+|||+. +||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 11235799999999999999998654334567788889999999999999998 999999999999999999999999
Q ss_pred CCcccccccccc-------------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHH
Q 003926 630 YNLPLLAENAEK-------------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 630 fGl~~~~~~~~~-------------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~ 696 (786)
||+++....... ....+||..|||||.+.+..|+.++|||||||++|||++ ||.... +.. ..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~~-~~ 236 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERV-RT 236 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHH-HH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HHH-HH
Confidence 999976543211 123468999999999998899999999999999999997 664321 111 11
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+...... . . |. ...+......+++.+||++||++|||+.|+++|.||.
T Consensus 237 ~~~~~~~---~----~-p~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~ 284 (299)
T 4g31_A 237 LTDVRNL---K----F-PP----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284 (299)
T ss_dssp HHHHHTT---C----C-CH----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHhcC---C----C-CC----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence 1111100 0 0 11 1122233456788999999999999999999988864
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-46 Score=410.09 Aligned_cols=274 Identities=15% Similarity=0.223 Sum_probs=207.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||++++++...... ...+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~-~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY-GEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT-TTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc-ccCC
Confidence 4688899999999999999996 47999999999755432 245789999999999999999999987642111 1235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|||||||+ |+|.+++... ..+++.....++.|++.||.|||+. +||||||||+|||++.++.+||+|||++
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 6899999996 7899999753 4699999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-----cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hccc
Q 003926 634 LLAENA-----EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADES 706 (786)
Q Consensus 634 ~~~~~~-----~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~ 706 (786)
+..... ......+||..|+|||.+.+. .|+.++||||+||++|||++|++||.+.+.......+..... ....
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 754321 123356789999999987664 579999999999999999999999987654333322222211 1111
Q ss_pred ccccc-----------ccccccc---cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 ARRSM-----------VDPAVNK---ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 ~~~~~-----------~d~~~~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..... ..+.... ........++.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence 00000 0000000 0000112456788999999999999999999999998753
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.3e-45 Score=398.03 Aligned_cols=266 Identities=15% Similarity=0.246 Sum_probs=199.8
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeecccc
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~ 548 (786)
...+.|+..+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|+++ +|||||++++++.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---- 91 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---- 91 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----
Confidence 34578999999999999999999853 47899999986543 456789999999998 69999999998765
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-Ccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKI 627 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl 627 (786)
.+..|+|||||++|+|.+++. .+++.+...++.|++.||+|||+. +||||||||+|||++.+ +.+||
T Consensus 92 ---~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 92 ---NDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp ---TTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred ---CCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 467999999999999999984 388999999999999999999998 99999999999999977 79999
Q ss_pred cCCCccccccccc-----------------------------ccccccccccccCccccccC-CCCcccceeehhHHHHH
Q 003926 628 SSYNLPLLAENAE-----------------------------KVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLE 677 (786)
Q Consensus 628 ~DfGl~~~~~~~~-----------------------------~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~E 677 (786)
+|||+|+...... .....+||+.|+|||.+.+. .|+.++||||+||++||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e 239 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence 9999996442211 11234688999999988765 58999999999999999
Q ss_pred HHhCCCCCCCch--hHHHHHHHHHHHHhc---------cccc--ccc--------------cc---cccc---------c
Q 003926 678 IIVGRPLKSRKE--VDLLKNQLQAVVTAD---------ESAR--RSM--------------VD---PAVN---------K 718 (786)
Q Consensus 678 lltG~~p~~~~~--~~~~~~~~~~~~~~~---------~~~~--~~~--------------~d---~~~~---------~ 718 (786)
|+||++||.... .+.+........... .... ... .+ |... .
T Consensus 240 ll~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 319 (361)
T 4f9c_A 240 LLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNL 319 (361)
T ss_dssp HHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC--------------------
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccc
Confidence 999999985432 222222221110000 0000 000 00 0000 0
Q ss_pred cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 719 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........++.+++.+||+.||++|||++|+++|+||..
T Consensus 320 ~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 320 EGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp --CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred cccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 001112345678999999999999999999999999753
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.3e-45 Score=419.66 Aligned_cols=257 Identities=16% Similarity=0.233 Sum_probs=212.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.+ .+.
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-------~~~ 228 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-------DNE 228 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-------SSE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------CCE
Confidence 367999999999999999999965 799999999976554456779999999999999999999998865 467
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC--CcccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN--LVAKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~--~~~kl~DfGl 632 (786)
+|||||||++|+|.++|.+. ...+++.+...++.|++.||.|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 229 ~~iv~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~ 303 (573)
T 3uto_A 229 MVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGL 303 (573)
T ss_dssp EEEEEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSS
T ss_pred EEEEEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccc
Confidence 99999999999999999753 23689999999999999999999998 99999999999999854 7899999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++...........+||..|+|||.+.+..|+.++||||+||++|||++|++||...........+.. ... . +
T Consensus 304 a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~---~~~----~-~ 375 (573)
T 3uto_A 304 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS---CDW----N-M 375 (573)
T ss_dssp CEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT---TCC----C-C
T ss_pred eeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHh---CCC----C-C
Confidence 9877665555667889999999999998999999999999999999999999987655443322211 100 0 1
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
++.... .....+.+++.+||+.||++|||+.|+++|+||.
T Consensus 376 ~~~~~~----~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~ 415 (573)
T 3uto_A 376 DDSAFS----GISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415 (573)
T ss_dssp CSGGGT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTS
T ss_pred Cccccc----CCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcC
Confidence 111111 1223566888899999999999999999999865
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.1e-44 Score=412.65 Aligned_cols=256 Identities=17% Similarity=0.233 Sum_probs=204.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHH---HHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFM---HHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~---~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|+..++||+|+||+||+|+.+ +|+.||||++++.. ......+. .++++++.++|||||++++++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~---- 263 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT---- 263 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE----
Confidence 467999999999999999999965 69999999997542 12233333 34677888999999999998765
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+.+|+|||||++|+|.++|.+. ..+++.....++.||+.||+|||+. +||||||||+|||+|.++++||+
T Consensus 264 ---~~~lylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~ 334 (689)
T 3v5w_A 264 ---PDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRIS 334 (689)
T ss_dssp ---SSEEEEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred ---CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEec
Confidence 46799999999999999999763 3589999999999999999999998 99999999999999999999999
Q ss_pred CCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 629 SYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 629 DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|||+|+...... ....+||+.|||||.+.. ..|+.++||||+||++|||++|++||...................
T Consensus 335 DFGlA~~~~~~~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~--- 410 (689)
T 3v5w_A 335 DLGLACDFSKKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA--- 410 (689)
T ss_dssp CCTTCEECSSCC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCC---
T ss_pred ccceeeecCCCC-CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC---
Confidence 999997664432 345679999999999865 469999999999999999999999997643322222222221111
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~~ 758 (786)
...+.. ...++.+++.+||++||++|++ +.||++|+||...
T Consensus 411 ------~~~p~~----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 411 ------VELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp ------CCCCTT----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred ------CCCCcc----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 111111 1235668888999999999998 7999999998864
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.6e-44 Score=384.40 Aligned_cols=285 Identities=33% Similarity=0.598 Sum_probs=230.5
Q ss_pred ccCHHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 466 TFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 466 ~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
.+++.++...+++|+..+.||+|+||.||+|+.++|+.||||++........+.|.+|++++++++||||++++++|..
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 106 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE- 106 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-
Confidence 3455566678899999999999999999999988899999999887655556789999999999999999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
.+..++||||+++|+|.+++..... ...++|..++.++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 107 ------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 107 ------RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp ------TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred ------CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 3568999999999999999975432 23689999999999999999999997 9999999999999999999
Q ss_pred ccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH---HHHHHHH
Q 003926 625 AKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD---LLKNQLQ 698 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~---~~~~~~~ 698 (786)
+||+|||+++...... ......++..|+|||....+.++.++|||||||++|||+||+.||...... ....+..
T Consensus 178 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 9999999986543211 122334678899999988888999999999999999999999998643221 1222211
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
.. .........+++........+....+.+++.+||+.||++|||+.||+++++.....++.
T Consensus 258 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~~ 319 (321)
T 2qkw_B 258 ES--HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319 (321)
T ss_dssp HH--HTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSCC
T ss_pred hc--cccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcccC
Confidence 11 112234455566665566677888899999999999999999999999999977665544
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.1e-43 Score=380.10 Aligned_cols=283 Identities=29% Similarity=0.559 Sum_probs=230.9
Q ss_pred ccccCHHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeee
Q 003926 464 YRTFSLEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHC 542 (786)
Q Consensus 464 ~~~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~ 542 (786)
.+.+++.++...+++|+..+.||+|+||.||+|+.++|+.||||++...... ....|.+|++++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 4578899999999999999999999999999999888999999999865432 334799999999999999999999998
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
.. .+..++||||+++|+|.+++.... ....++|..+..++.|++.||+|||+.+.++|+||||||+||+++.
T Consensus 97 ~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 97 MT-------PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CC-------SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred ec-------CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 65 355799999999999999998643 2345999999999999999999999987779999999999999999
Q ss_pred CCcccccCCCccccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch-----hHHHH
Q 003926 622 NLVAKISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-----VDLLK 694 (786)
Q Consensus 622 ~~~~kl~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-----~~~~~ 694 (786)
++.+||+|||++....... ......++..|+|||.+....++.++|||||||++|||+||++||+... .....
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 9999999999997653222 2233447888999999988889999999999999999999999996321 11122
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
.++... ..........+.........+....+.+++.+||+.||++|||+.||+++|+.
T Consensus 250 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 250 DWVKGL--LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp HHHTTT--TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHHHH--hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 222111 11223344555555566677888899999999999999999999999999974
No 22
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.7e-43 Score=374.11 Aligned_cols=290 Identities=29% Similarity=0.434 Sum_probs=229.0
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC--CCCCCCccEEeCC----CCEEEEEeCCCCCCC--CCCCCCcCCc
Q 003926 27 QLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCN--TEPTSSLTVVCYE----ESITQLHIVGNKRAP--MLPLSFSMDS 98 (786)
Q Consensus 27 ~~~~~~~~~ll~~k~~~~~~~~l~~W~~~~~~C~--w~~~~~~~v~c~~----~~v~~l~l~~~~~~~--~l~~~~~~~~ 98 (786)
.|.++|++||++||+++.+|..+++|+.+++||. |. ||.|.. ++|+.|+++++.+.+ .+|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~-----gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~------- 69 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKPYPIP------- 69 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSCEECC-------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCc-----ceEeCCCCCCceEEEEECCCCCccCCcccC-------
Confidence 5999999999999999988878899988889998 87 599964 789999999998876 554
Q ss_pred cccccCCCCCCCEEEccC-CCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 99 FVTTLVKLPDLKVLRLVS-LGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~-n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
..+.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..|..
T Consensus 70 --~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 147 (313)
T 1ogq_A 70 --SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp --GGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred --hhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhc
Confidence 4677899999999995 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEccCCcCcccCCccccCCC-CCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhcc
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLE-NLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILS 255 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls 255 (786)
+++|++|+|++|.+++.+|..|..++ +|+.|+|++|++++.+|. +..++ |++|+|++|.++
T Consensus 148 l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~---------------- 210 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE---------------- 210 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE----------------
T ss_pred CCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc----------------
Confidence 99999999999999999999999998 899999999999987775 66665 888887777665
Q ss_pred CCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccC
Q 003926 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL 335 (786)
Q Consensus 256 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~ 335 (786)
+.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+
T Consensus 211 -----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 211 -----GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp -----ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred -----CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 44455555556666666666666554444 555566666666666666666666666666666666666666666
Q ss_pred ChhhhcCCCCcEEEcCCcc
Q 003926 336 PNCLLAGSKNRVVLYARNC 354 (786)
Q Consensus 336 p~~~~~~~~~~~~~~~~N~ 354 (786)
|.. .....+..+.+.+|.
T Consensus 285 p~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 285 PQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCS-TTGGGSCGGGTCSSS
T ss_pred CCC-ccccccChHHhcCCC
Confidence 554 344445555555554
No 23
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4e-42 Score=369.10 Aligned_cols=266 Identities=19% Similarity=0.338 Sum_probs=215.5
Q ss_pred cccCHHHHHHHhcC----------CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC
Q 003926 465 RTFSLEELEEATNN----------FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR 533 (786)
Q Consensus 465 ~~~~~~~l~~~~~~----------f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ 533 (786)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.|.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 35778888888765 566778999999999999976 7999999999876666678899999999999999
Q ss_pred CcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCC
Q 003926 534 HLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLK 613 (786)
Q Consensus 534 NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk 613 (786)
|||++++++.. .+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+|||||
T Consensus 103 niv~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlk 168 (321)
T 2c30_A 103 NVVEMYKSYLV-------GEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIK 168 (321)
T ss_dssp TBCCEEEEEEE-------TTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred CcceEEEEEEE-------CCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCC
Confidence 99999999875 4568999999999999999874 2589999999999999999999997 99999999
Q ss_pred CCceeecCCCcccccCCCcccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH
Q 003926 614 ITDILLDQNLVAKISSYNLPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692 (786)
Q Consensus 614 ~~NILld~~~~~kl~DfGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~ 692 (786)
|+||+++.++.+||+|||++...... .......++..|+|||......++.++|||||||++|||++|++||.......
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~ 248 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ 248 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999999998655332 22234567888999999988889999999999999999999999997654433
Q ss_pred HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+. ... .+.... .......+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 249 ~~~~~~---~~~--------~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 300 (321)
T 2c30_A 249 AMKRLR---DSP--------PPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300 (321)
T ss_dssp HHHHHH---HSS--------CCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred HHHHHh---cCC--------CCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence 222211 111 010000 0111234667888999999999999999999998764
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.2e-42 Score=365.62 Aligned_cols=255 Identities=18% Similarity=0.321 Sum_probs=208.9
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|...+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++|||||++++++.. .+.
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 91 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-------GDE 91 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-------CCE
Confidence 45688899999999999999995 5799999999987766667889999999999999999999998875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.+. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (297)
T ss_dssp EEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCce
Confidence 89999999999999999763 589999999999999999999998 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ......++..|+|||.+....++.++|||||||++|||+||+.||...........+. ... ......
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~---~~~~~~ 238 (297)
T 3fxz_A 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNG---TPELQN 238 (297)
T ss_dssp ECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHC---SCCCSC
T ss_pred ecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC---CCCCCC
Confidence 554322 2334567888999999988899999999999999999999999997654332221111 111 001111
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+ ......+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 239 ~-------~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 275 (297)
T 3fxz_A 239 P-------EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275 (297)
T ss_dssp G-------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred c-------cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcc
Confidence 1 112235668888999999999999999999988754
No 25
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.5e-42 Score=370.10 Aligned_cols=253 Identities=17% Similarity=0.284 Sum_probs=209.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++++++||||+++++++.. .
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-------~ 86 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-------E 86 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------C
Confidence 45788899999999999999996 57999999999765432 24568899999999999999999999864 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 160 (328)
T 3fe3_A 87 KTLYLIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF 160 (328)
T ss_dssp SEEEEEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTC
T ss_pred CEEEEEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccC
Confidence 5789999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCC-cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t-~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.............++..|+|||.+....++ .++||||+||++|||++|++||.......+...+.. ..
T Consensus 161 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~---~~------- 230 (328)
T 3fe3_A 161 SNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR---GK------- 230 (328)
T ss_dssp CGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC-------
T ss_pred ceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CC-------
Confidence 9766554445556788899999998877765 799999999999999999999987665444332211 10
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||.+|||+.|+++|+|+..
T Consensus 231 --~~~p~~~----s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 231 --YRIPFYM----STDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp --CCCCTTS----CHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred --CCCCCCC----CHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence 0011111 234667888999999999999999999998754
No 26
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.8e-42 Score=368.83 Aligned_cols=254 Identities=17% Similarity=0.261 Sum_probs=200.8
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|++++++++|||||++++++.. .+
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-------~~ 81 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-------AN 81 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-------SS
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-------CC
Confidence 46788899999999999999995 5799999999976543 234678999999999999999999999865 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++|||||++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 82 ~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a 155 (347)
T 3zgw_A 82 KIFMVLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLC 155 (347)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCc
Confidence 789999999999999999753 3589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccc--ccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 634 LLAENAE--KVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
....... ......++..|+|||.+....+ +.++||||+||++|||++|+.||...........+.. ..
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~---~~------ 226 (347)
T 3zgw_A 156 AKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR---GK------ 226 (347)
T ss_dssp BC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TC------
T ss_pred ccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CC------
Confidence 6543222 2234567889999999887765 8999999999999999999999987655443322211 11
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+... ...+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 227 ---~~~p~~~----s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~ 267 (347)
T 3zgw_A 227 ---YDVPKWL----SPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267 (347)
T ss_dssp ---CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred ---CCCCCCC----CHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence 0011111 1345678889999999999999999999998764
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.3e-41 Score=359.67 Aligned_cols=277 Identities=31% Similarity=0.518 Sum_probs=219.3
Q ss_pred cccCHHHHHHHhcCCCcc------CccCCCCCceeEEEEecCCcEEEEEEecccCC----CChHHHHHHHHHHhcCCCCC
Q 003926 465 RTFSLEELEEATNNFDTS------AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRH 534 (786)
Q Consensus 465 ~~~~~~~l~~~~~~f~~~------~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~N 534 (786)
..|+++++..++++|+.. +.||+|+||.||+|+. +++.||||++..... ...+.|.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 568999999999999888 8999999999999987 578999999875421 22467999999999999999
Q ss_pred cceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCC
Q 003926 535 LVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614 (786)
Q Consensus 535 Iv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~ 614 (786)
|+++++++.. .+..++||||+++|+|.+++........++|..+..++.|+++||.|||+. +|+||||||
T Consensus 92 i~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp 161 (307)
T 2nru_A 92 LVELLGFSSD-------GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKS 161 (307)
T ss_dssp BCCEEEEECS-------SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred eEEEEEEEec-------CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCH
Confidence 9999998864 356899999999999999997543345699999999999999999999997 999999999
Q ss_pred CceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH
Q 003926 615 TDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD 691 (786)
Q Consensus 615 ~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~ 691 (786)
+||+++.++.+||+|||++........ .....++..|+|||... +.++.++||||||+++|||++|++||......
T Consensus 162 ~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 162 ANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred HHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 999999999999999999865433211 22345678899999775 46899999999999999999999998754322
Q ss_pred H-HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 692 L-LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 692 ~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
. ...+... .........+.+++.. ..........+.+++.+||+.||++|||+.||+++|..
T Consensus 241 ~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 241 QLLLDIKEE-IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp SBTTHHHHH-HHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 1 1111111 1111111222233322 22345667788899999999999999999999999974
No 28
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.5e-41 Score=369.72 Aligned_cols=256 Identities=16% Similarity=0.243 Sum_probs=208.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.+.|+..+.||+|+||.||+|+.+ +|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN---- 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe----
Confidence 456888999999999999999965 6999999999765432 24679999999999999999999998864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----c
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----V 624 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~ 624 (786)
.+..++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++ .
T Consensus 87 ---~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~ 157 (361)
T 2yab_A 87 ---RTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157 (361)
T ss_dssp ---SSEEEEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCC
T ss_pred ---CCEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccC
Confidence 45789999999999999999753 3689999999999999999999997 999999999999998877 7
Q ss_pred ccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
+||+|||++.............++..|+|||.+....|+.++|||||||++|||++|++||...........+.. ..
T Consensus 158 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~---~~ 234 (361)
T 2yab_A 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA---VS 234 (361)
T ss_dssp EEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT---TC
T ss_pred EEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cC
Confidence 999999999766554444556788899999999888899999999999999999999999976554433222211 10
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..+++.... .....+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 235 -----~~~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 277 (361)
T 2yab_A 235 -----YDFDEEFFS----QTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (361)
T ss_dssp -----CCCCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred -----CCCCchhcc----CCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence 001111111 1123566888899999999999999999999875
No 29
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.6e-41 Score=364.38 Aligned_cols=253 Identities=17% Similarity=0.283 Sum_probs=208.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEeccc---CCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMK---KCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||+||+|+.+ +|+.||||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 76 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT------- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-------
Confidence 357888999999999999999965 6999999999754 23446779999999999999999999998865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 77 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 77 HDRLCFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeecc
Confidence 45789999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+++... .........++..|+|||.+....++.++|||||||++|||++|++||...+...+...+. ...
T Consensus 151 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~~------ 221 (337)
T 1o6l_A 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL---MEE------ 221 (337)
T ss_dssp TCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC------
T ss_pred chhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH---cCC------
Confidence 986532 2233345567889999999988889999999999999999999999997665443322221 111
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||++|| ++.||++|+||..
T Consensus 222 ---~~~p~~~----s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 222 ---IRFPRTL----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp ---CCCCTTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred ---CCCCCCC----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence 0111111 23466788899999999999 9999999999864
No 30
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=364.52 Aligned_cols=258 Identities=15% Similarity=0.204 Sum_probs=209.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|...+.||+|+||.||+|+.. +|+.||+|.++... .....+.+|++++++++|||||++++++.. .+.
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~~ 75 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFES-------MEE 75 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------TTE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEec-------CCE
Confidence 357888999999999999999965 68999999987542 334668999999999999999999999865 457
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC--CCcccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--NLVAKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--~~~~kl~DfGl 632 (786)
.++|||||++|+|.+++... ...+++.....++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~ 150 (321)
T 1tki_A 76 LVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQ 150 (321)
T ss_dssp EEEEECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred EEEEEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCC
Confidence 89999999999999999753 23689999999999999999999998 9999999999999997 78999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+.............++..|+|||......++.++|||||||++|||++|++||...........+. .... ..
T Consensus 151 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~~~-----~~ 222 (321)
T 1tki_A 151 ARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM---NAEY-----TF 222 (321)
T ss_dssp CEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HTCC-----CC
T ss_pred CeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH---cCCC-----CC
Confidence 976655444445567889999999988888999999999999999999999997655433322221 1110 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
++.... .....+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 223 ~~~~~~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 223 DEEAFK----EISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp CHHHHT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred Chhhhc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence 111111 112356788899999999999999999999998754
No 31
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.5e-41 Score=362.54 Aligned_cols=258 Identities=21% Similarity=0.362 Sum_probs=198.9
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+....++|+..+.||+|+||+||+|+. +|+.||||++...... ..++|.+|++++++++|||||++++++..
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 105 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ----- 105 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----
Confidence 334456788899999999999999987 5889999999765432 23579999999999999999999998864
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC--ccccCCCCCceeecCCCcccc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~--ivHrdlk~~NILld~~~~~kl 627 (786)
.+..++||||+++|+|.+++........+++..++.++.|+++||+|||+. + |+||||||+||+++.++.+||
T Consensus 106 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL 180 (309)
T 3p86_A 106 --PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKV 180 (309)
T ss_dssp --TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEE
T ss_pred --CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEE
Confidence 345899999999999999998643223489999999999999999999997 6 999999999999999999999
Q ss_pred cCCCccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 628 SSYNLPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 628 ~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
+|||+++...... ......++..|+|||.+....++.++|||||||++|||+||+.||...........+.. ..
T Consensus 181 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~---~~-- 255 (309)
T 3p86_A 181 CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF---KC-- 255 (309)
T ss_dssp CCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH---SC--
T ss_pred CCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cC--
Confidence 9999986543321 22344677889999999888899999999999999999999999987554433222111 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. .......++ ..+.+++.+||+.||++|||+.||++.+.
T Consensus 256 -~----~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 256 -K----RLEIPRNLN----PQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp -C----CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -C----CCCCCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0 011111222 35678888999999999999999999886
No 32
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=362.61 Aligned_cols=255 Identities=18% Similarity=0.260 Sum_probs=206.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+.|+..+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 85 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN----- 85 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 45788899999999999999965 6899999999754322 35779999999999999999999998865
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----cc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~~ 625 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+
T Consensus 86 --~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 157 (326)
T 2y0a_A 86 --KTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRI 157 (326)
T ss_dssp --SSEEEEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCE
T ss_pred --CCEEEEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCE
Confidence 45689999999999999999753 4689999999999999999999997 999999999999999887 79
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||+++............++..|+|||.+....++.++|||||||++|||++|++||...........+.. ...
T Consensus 158 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~ 234 (326)
T 2y0a_A 158 KIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA---VNY 234 (326)
T ss_dssp EECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH---TCC
T ss_pred EEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh---cCC
Confidence 99999999766544444455678899999999888899999999999999999999999976544332222211 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ..+..... ....+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 235 ----~-~~~~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 276 (326)
T 2y0a_A 235 ----E-FEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276 (326)
T ss_dssp ----C-CCHHHHTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred ----C-cCcccccc----CCHHHHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence 0 00111111 123566888899999999999999999999875
No 33
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.2e-41 Score=365.67 Aligned_cols=256 Identities=21% Similarity=0.293 Sum_probs=207.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||++...... ..+.+.+|++++++++|||||++++++.+ .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~ 100 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-------E 100 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 457889999999999999999965 6899999999765432 23578999999999999999999998875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC---cccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL---VAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl~D 629 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.+. .+||+|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEee
Confidence 5689999999999999999753 3689999999999999999999998 999999999999998654 599999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||.+....|+.++|||||||++|||++|++||...+...+...+... . .
T Consensus 175 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~---~----~ 247 (362)
T 2bdw_A 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG---A----Y 247 (362)
T ss_dssp CTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT---C----C
T ss_pred cCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC---C----C
Confidence 99997665444444556888999999998888999999999999999999999999766544333222211 0 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
....+. .......+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 248 ~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 289 (362)
T 2bdw_A 248 DYPSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 289 (362)
T ss_dssp CCCTTG-----GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred CCCccc-----ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence 000010 011223567888899999999999999999999875
No 34
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=367.03 Aligned_cols=258 Identities=16% Similarity=0.247 Sum_probs=208.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++.. .
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-------~ 87 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-------E 87 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------C
Confidence 56788899999999999999965 68999999987543 2345789999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~ 161 (384)
T 4fr4_A 88 EDMFMVVDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNI 161 (384)
T ss_dssp SEEEEEECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccce
Confidence 5789999999999999999863 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc---CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR---GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++............++..|+|||.+.. ..|+.++|||||||++|||++|++||...................
T Consensus 162 a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~----- 236 (384)
T 4fr4_A 162 AAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV----- 236 (384)
T ss_dssp CEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-----
T ss_pred eeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-----
Confidence 977655555556678899999998863 358999999999999999999999997543322222222211111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHHHHhh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-VEDVLWNLQFAAQVQ 760 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-~~evl~~l~~~~~~~ 760 (786)
...+..+ ...+.+++.+||+.||++||+ +.+|..|+||.....
T Consensus 237 ----~~~p~~~----s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w 280 (384)
T 4fr4_A 237 ----VTYPSAW----SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINW 280 (384)
T ss_dssp ----CCCCTTS----CHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred ----cCCCCcC----CHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCH
Confidence 0011111 235678888999999999998 899999999876433
No 35
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.9e-41 Score=366.57 Aligned_cols=257 Identities=19% Similarity=0.378 Sum_probs=204.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||||+++.... ...+.|.+|+++++++ +|||||+++++|..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-
Confidence 456788899999999999999852 356899999976532 2346799999999999 89999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..|+||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +|+||||
T Consensus 159 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl 229 (370)
T 2psq_A 159 ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDL 229 (370)
T ss_dssp ------SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred ------CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence 3568999999999999999976431 23589999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+|||++.++.+||+|||+++....... .....++..|+|||.+....++.++|||||||++|||+| |+.||...
T Consensus 230 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp CGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999875433221 122334567999999988889999999999999999999 99999876
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+...+.. . . .+.....++ ..+.+++.+||+.||++|||+.|++++|....
T Consensus 310 ~~~~~~~~~~~----~---~----~~~~~~~~~----~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 310 PVEELFKLLKE----G---H----RMDKPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp CGGGHHHHHHT----T---C----CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhc----C---C----CCCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 55444332211 0 0 011111222 35677888999999999999999999997543
No 36
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=356.57 Aligned_cols=273 Identities=18% Similarity=0.243 Sum_probs=211.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++... ....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 83 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET-----TTRH 83 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-----TTCC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC-----CCce
Confidence 45778899999999999999965 589999999986542 3467789999999999999999999987642 2346
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee----cCCCcccccCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKISSY 630 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~Df 630 (786)
.++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Df 160 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccC
Confidence 899999999999999998654334599999999999999999999998 99999999999999 88889999999
Q ss_pred CcccccccccccccccccccccCccccc--------cCCCCcccceeehhHHHHHHHhCCCCCCCch-hHHHHHHHHHHH
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSA--------RGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVV 701 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~--------~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-~~~~~~~~~~~~ 701 (786)
|+++............++..|+|||.+. ...++.++|||||||++|||+||+.||.... .......+....
T Consensus 161 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred CCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 9997665544444556788999999875 4678999999999999999999999986322 111122222222
Q ss_pred Hhcccc-cc---cc----c--cccc--cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 702 TADESA-RR---SM----V--DPAV--NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 702 ~~~~~~-~~---~~----~--d~~~--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... .. .. . ++.. ...........+.+++.+||+.||++|||++|+++|+.-..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 211100 00 00 0 0011 11234566677888999999999999999999999997443
No 37
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=359.72 Aligned_cols=254 Identities=22% Similarity=0.385 Sum_probs=201.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|...+.||+|+||+||+|+.. +++.||+|++........+.|.+|++++++++|||||++++++.+ .+..
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~~ 82 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-------DKRL 82 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TTEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-------CCee
Confidence 45777899999999999999965 699999999876544456789999999999999999999999875 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.... ..++|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 157 (310)
T 3s95_A 83 NFITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARL 157 (310)
T ss_dssp EEEEECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeeccccee
Confidence 99999999999999998632 4699999999999999999999997 999999999999999999999999999865
Q ss_pred ccccccc---------------ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH--HHHHH
Q 003926 636 AENAEKV---------------GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL--KNQLQ 698 (786)
Q Consensus 636 ~~~~~~~---------------~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~--~~~~~ 698 (786)
....... ....++..|+|||.+....++.++|||||||++|||++|..|+........ .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~ 237 (310)
T 3s95_A 158 MVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVR 237 (310)
T ss_dssp CC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHH
T ss_pred cccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhh
Confidence 4322111 134577889999999888999999999999999999999988754211100 00000
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. .+......+ ...+.+++.+||+.||++|||+.|+++.+....
T Consensus 238 ~~-----------~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 238 GF-----------LDRYCPPNC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp HH-----------HHHTCCTTC----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cc-----------ccccCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 000011111 124667888999999999999999999887544
No 38
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.1e-41 Score=360.60 Aligned_cols=269 Identities=17% Similarity=0.278 Sum_probs=202.9
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+.++|+.||||++...... ..+.+.+|++++++++|||||++++++.. .+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~ 92 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-------ER 92 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-------SS
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-------CC
Confidence 4568889999999999999999988999999999755332 24678999999999999999999998864 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 166 (311)
T 3niz_A 93 CLTLVFEFME-KDLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA 166 (311)
T ss_dssp CEEEEEECCS-EEHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCC-CCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCc
Confidence 6899999998 58888887532 3589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hccccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-ADESARRS 710 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~ 710 (786)
+..... .......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+..... .....+..
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 167 RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp EETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGG
T ss_pred eecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhh
Confidence 755322 22334456788999998765 5689999999999999999999999976543332222222111 11111100
Q ss_pred cc-------------cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MV-------------DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~-------------d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. +.............++.+++.+||+.||++|||+.|+++|+||..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 306 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence 00 000000000112245678899999999999999999999998764
No 39
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.3e-41 Score=367.16 Aligned_cols=255 Identities=22% Similarity=0.388 Sum_probs=194.6
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|+.. ++..||||+++.... ...++|.+|++++++++|||||+++|+|..
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 117 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK------- 117 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-------
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-------
Confidence 57888999999999999999864 577899999976532 234679999999999999999999999864
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.++++.. ...+++.+++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 118 ~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 192 (373)
T 2qol_A 118 SKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFG 192 (373)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred CCceEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCc
Confidence 35689999999999999999863 23689999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 632 LPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 632 l~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
+++........ ....++..|+|||.+....++.++|||||||++|||++ |+.||.......+...+.. .
T Consensus 193 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~----~-- 266 (373)
T 2qol_A 193 LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE----G-- 266 (373)
T ss_dssp ---------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT----T--
T ss_pred cccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C--
Confidence 98765432211 11223457999999988899999999999999999998 9999976554333222211 0
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.. ......+ ...+.+++.+||+.||++||++.||++.+.....
T Consensus 267 -~~----~~~~~~~----~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 267 -YR----LPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp -EE----CCCCTTC----BHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CC----CCCCccc----cHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 00 0001112 2356788899999999999999999999975543
No 40
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=367.48 Aligned_cols=254 Identities=18% Similarity=0.220 Sum_probs=200.9
Q ss_pred ccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 481 TSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
..+.||+|+||.||+|+. .+|+.||||+++.......+.|.+|++++++++|||||++++++.. .+..++||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~~~~lv~ 165 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-------KNDIVLVM 165 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------SSEEEEEE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------CCEEEEEE
Confidence 356899999999999996 4699999999986554456789999999999999999999999875 45689999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee--cCCCcccccCCCcccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL--DQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl--d~~~~~kl~DfGl~~~~~ 637 (786)
||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 166 E~~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 166 EYVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp ECCTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 999999999998753 23589999999999999999999997 99999999999999 677899999999997665
Q ss_pred cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccccc
Q 003926 638 NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVN 717 (786)
Q Consensus 638 ~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 717 (786)
.........++..|+|||.+....++.++|||||||++|||++|++||...........+ ..... .. .+...
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i---~~~~~----~~-~~~~~ 312 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI---LACRW----DL-EDEEF 312 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHTCC----CS-CSGGG
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhccC----CC-Chhhh
Confidence 444444556788999999998888999999999999999999999999765443322211 11110 00 11111
Q ss_pred ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 718 KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 718 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .....+.+++.+||+.||++|||+.|+++|+||...
T Consensus 313 ~----~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 313 Q----DISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred c----cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 1 112356788889999999999999999999998864
No 41
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-40 Score=363.07 Aligned_cols=260 Identities=18% Similarity=0.248 Sum_probs=197.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.++++++|||||++++++.. .+.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~~~ 90 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILT-------PTH 90 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------SSE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEee-------CCE
Confidence 456888999999999999999965 79999999997543 334678999999999999999999999875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--ccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--AKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--~kl~DfGl 632 (786)
.++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 91 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~ 164 (361)
T 3uc3_A 91 LAIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGY 164 (361)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCc
Confidence 89999999999999999753 3589999999999999999999997 9999999999999988776 99999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcc-cceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEK-IDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~k-sDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 710 (786)
++............++..|+|||.+....++.+ +|||||||++|||++|++||..... ......+........ .
T Consensus 165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~----~ 240 (361)
T 3uc3_A 165 SKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY----S 240 (361)
T ss_dssp C---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC----C
T ss_pred cccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC----C
Confidence 865433333344567889999999888777665 8999999999999999999975432 222222222221110 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
..+. ... ...+.+++.+||+.||++|||+.|+++|+||.+...
T Consensus 241 ~~~~---~~~----s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~ 283 (361)
T 3uc3_A 241 IPDD---IRI----SPECCHLISRIFVADPATRISIPEIKTHSWFLKNLP 283 (361)
T ss_dssp CCTT---SCC----CHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCC
T ss_pred CCCc---CCC----CHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCCc
Confidence 0000 011 235668888999999999999999999999976543
No 42
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=366.14 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=203.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|.++++.+ +|||||++++++..
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~------ 95 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT------ 95 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC------
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe------
Confidence 467899999999999999999965 68999999997542 23456788999999988 79999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DF 168 (353)
T 3txo_A 96 -PDRLFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADF 168 (353)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccc
Confidence 45789999999999999999763 3589999999999999999999998 9999999999999999999999999
Q ss_pred Ccccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++... .........++..|+|||.+....|+.++|||||||++|||++|++||.......+...+. ...
T Consensus 169 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~~~----- 240 (353)
T 3txo_A 169 GMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---NDE----- 240 (353)
T ss_dssp TTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC-----
T ss_pred cceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH---cCC-----
Confidence 9987532 2223344568889999999988889999999999999999999999998765544332221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV------EDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~------~evl~~l~~~~~ 758 (786)
. ..+.. ....+.+++.+||++||++||++ .|+++|+||...
T Consensus 241 -~---~~p~~----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 241 -V---VYPTW----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp -C---CCCTT----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred -C---CCCCC----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 0 01111 12346678889999999999998 899999998753
No 43
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9e-41 Score=354.73 Aligned_cols=255 Identities=17% Similarity=0.302 Sum_probs=198.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--------------------------ChHHHHHHHHHHh
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--------------------------STRNFMHHIELIS 528 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--------------------------~~~~f~~E~~~l~ 528 (786)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.|.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 356888999999999999999864 6899999998754311 1356899999999
Q ss_pred cCCCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCcc
Q 003926 529 KLRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVF 608 (786)
Q Consensus 529 ~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~iv 608 (786)
+++||||+++++++.. ...+..++||||+++|+|.+++.. ..+++.....++.|+++||+|||+. +|+
T Consensus 92 ~l~h~~iv~~~~~~~~-----~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iv 159 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD-----PNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KII 159 (298)
T ss_dssp TCCCTTBCCEEEEEEC-----SSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred hCCCCCCCeEEEEEEc-----CCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence 9999999999998864 224578999999999999887543 3689999999999999999999998 999
Q ss_pred ccCCCCCceeecCCCcccccCCCccccccccc-ccccccccccccCccccccCC---CCcccceeehhHHHHHHHhCCCC
Q 003926 609 SNNLKITDILLDQNLVAKISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSARGK---LEEKIDIYDFGLILLEIIVGRPL 684 (786)
Q Consensus 609 Hrdlk~~NILld~~~~~kl~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~---~t~ksDVwSfGvvl~ElltG~~p 684 (786)
||||||+||+++.++.+||+|||++....... ......++..|+|||...... ++.++|||||||++|||++|+.|
T Consensus 160 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 239 (298)
T 2zv2_A 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239 (298)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 99999999999999999999999986554322 223456788999999887654 47889999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 685 KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
|...........+. ... ... +. .... ...+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 240 f~~~~~~~~~~~~~---~~~----~~~--~~-~~~~----~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 240 FMDERIMCLHSKIK---SQA----LEF--PD-QPDI----AEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp SCCSSHHHHHHHHH---HCC----CCC--CS-SSCC----CHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred CCCccHHHHHHHHh---ccc----CCC--CC-cccc----CHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 97655433222211 110 000 00 0111 23466788899999999999999999999975
No 44
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.6e-41 Score=400.28 Aligned_cols=325 Identities=27% Similarity=0.329 Sum_probs=222.9
Q ss_pred ccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCC---CCCCCc-------
Q 003926 26 EQLQSSQAQTLLRIQGLLNNPAVLSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPM---LPLSFS------- 95 (786)
Q Consensus 26 ~~~~~~~~~~ll~~k~~~~~~~~l~~W~~~~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~---l~~~~~------- 95 (786)
.++.++|++||++||+++.||..+++|+.+++||.|. ||+|+.++|++|+|+++.+.|. +|..+.
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~-----gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFD-----GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGST-----TEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCc-----ceEECCCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 3456789999999999998887889999888999998 5999988999999999988875 443111
Q ss_pred ----C---CccccccCCCCCCCEEEccCCCCccCCCc--cCCCCCCCCEEeccCCCCCCCCCccc-cCCCCCcEEEcccc
Q 003926 96 ----M---DSFVTTLVKLPDLKVLRLVSLGLWGPLSG--KISRLSSLEILNMSSNFLNGAIPQEL-SILTSLQTLILDEN 165 (786)
Q Consensus 96 ----~---~~~~~~l~~l~~L~~L~L~~n~l~g~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N 165 (786)
. ..++..++++++|++|+|++|.+.|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 1 12346788899999999999999988888 88999999999999999988888766 78888888888888
Q ss_pred cCCCCCCcc---cCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCC
Q 003926 166 MLAGRVPDW---LGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQF 242 (786)
Q Consensus 166 ~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 242 (786)
++++..|.. +.++++|++|++++|.+++.+|. .++++|++|+|++|.+++.+|.++.+++|++|+|++|.+++.+
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCH
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcc
Confidence 888777765 66666666666666666654442 5556666666666666655555555556666666665555544
Q ss_pred Ccc-------------------------ccchhhhhccCCccCCcChhhhcCc-cccceeeccCccccCCCchhhCCCCC
Q 003926 243 PKV-------------------------GKKLVTMILSKNKFRSAIPAEVSSY-YQLQRLDLSSNRFVGPFPQALLSLPS 296 (786)
Q Consensus 243 p~~-------------------------~~~L~~L~ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~ 296 (786)
|.. .++|++|++++|.+++.+|..+... ++|+.|+|++|++++.+|..|+++++
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred cHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 432 2345555555555555555555443 55666666666665555666666666
Q ss_pred CcEEEeecCCCCcccCcc-CCCCCCCCEEeCcCCcCCccCChhhhcCC-CCcEEEcCCcccCC
Q 003926 297 ITYLNIADNKLTGKLFDD-LSCNPELGFVDLSSNLLTGQLPNCLLAGS-KNRVVLYARNCLAA 357 (786)
Q Consensus 297 L~~L~l~~N~l~g~~~~~-~~~~~~L~~l~ls~N~l~g~~p~~~~~~~-~~~~~~~~~N~l~~ 357 (786)
|+.|++++|+++|.+|.. +..+++|+.|++++|.++|.+|..+.... .++.+++++|.+++
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~ 382 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEE
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCC
Confidence 666666666665555544 55556666666666666656665555544 55666666665554
No 45
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-41 Score=368.07 Aligned_cols=258 Identities=16% Similarity=0.201 Sum_probs=208.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++|||||++++++.. ...
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~~~ 122 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-------KYE 122 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-------SSE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-------CCE
Confidence 457889999999999999999965 689999999976543345679999999999999999999998865 457
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC--CCcccccCCCc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--NLVAKISSYNL 632 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--~~~~kl~DfGl 632 (786)
.++||||+++|+|.+++... ...+++.....++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~ 197 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGL 197 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccc
Confidence 89999999999999999753 23689999999999999999999997 9999999999999974 47799999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++............++..|+|||.+....++.++|||||||++|||++|++||...........+. .... ..
T Consensus 198 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~---~~~~-----~~ 269 (387)
T 1kob_A 198 ATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK---RCDW-----EF 269 (387)
T ss_dssp CEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---HCCC-----CC
T ss_pred ceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCC-----CC
Confidence 976654444444567889999999988889999999999999999999999997655433222211 1110 01
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
++.... .....+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 270 ~~~~~~----~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (387)
T 1kob_A 270 DEDAFS----SVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG 310 (387)
T ss_dssp CSSTTT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred Cccccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence 111111 12235678888999999999999999999998753
No 46
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.1e-41 Score=373.72 Aligned_cols=267 Identities=13% Similarity=0.176 Sum_probs=211.3
Q ss_pred HHHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeee
Q 003926 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFE 544 (786)
Q Consensus 469 ~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~ 544 (786)
+.++...+++|+..++||+|+||+||+|+.+ +++.||||+++... ....+.+.+|+.++++++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4556666789999999999999999999976 58899999997532 2233458999999999999999999998875
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
.+..|+|||||++|+|.+++.+. ...+++.....++.|++.||+|||+. +||||||||+|||+|.++.
T Consensus 146 -------~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~ 213 (437)
T 4aw2_A 146 -------DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGH 213 (437)
T ss_dssp -------SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred -------CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCC
Confidence 46789999999999999999863 23689999999999999999999997 9999999999999999999
Q ss_pred ccccCCCcccccccccc--cccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHH
Q 003926 625 AKISSYNLPLLAENAEK--VGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~--~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~ 697 (786)
+||+|||+++....... .....++..|+|||.+. .+.|+.++|||||||++|||++|++||...+.......+
T Consensus 214 vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i 293 (437)
T 4aw2_A 214 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293 (437)
T ss_dssp EEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred EEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh
Confidence 99999999865533222 23356889999999986 456899999999999999999999999876544332222
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE--RPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~l~~~~~ 758 (786)
....... .-|...... ...+.+++.+|++.+|++ ||++.|+++|+||...
T Consensus 294 ~~~~~~~-------~~p~~~~~~----s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 294 MNHKERF-------QFPTQVTDV----SENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HTHHHHC-------CCCSSCCCS----CHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred hhccccc-------cCCcccccC----CHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 1110000 001110111 234567888999888888 9999999999998753
No 47
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.9e-41 Score=364.05 Aligned_cols=259 Identities=16% Similarity=0.254 Sum_probs=205.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC-----CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-----CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
+.|+..+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|++++++++|||||++++++..
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------ 97 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS------ 97 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe------
Confidence 45888999999999999999864 69999999986432 1246789999999999999999999998875
Q ss_pred CCceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---cc
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AK 626 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~k 626 (786)
.+..|+|||||++|+|.+++... .....+++.....++.|++.||+|||+. +|+||||||+|||++.++. +|
T Consensus 98 -~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vk 173 (351)
T 3c0i_A 98 -DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVK 173 (351)
T ss_dssp -TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEE
T ss_pred -CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEE
Confidence 45789999999999999887642 1223589999999999999999999997 9999999999999987654 99
Q ss_pred ccCCCccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 627 ISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 627 l~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|+|||++....... ......++..|+|||.+....++.++|||||||++|||++|++||............ ....
T Consensus 174 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~----~~~~ 249 (351)
T 3c0i_A 174 LGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII----KGKY 249 (351)
T ss_dssp ECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHH----HTCC
T ss_pred EecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHH----cCCC
Confidence 99999986654322 223456788999999998888999999999999999999999999765432221111 1100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..++..... ....+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 250 -----~~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 250 -----KMNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp -----CCCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred -----CCCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 011111111 12356788889999999999999999999998753
No 48
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.6e-40 Score=344.59 Aligned_cols=253 Identities=20% Similarity=0.365 Sum_probs=204.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|+..++..||||++.... ...++|.+|++++++++||||+++++++.+ .+..+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 81 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPIC 81 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEec-------CCceE
Confidence 4677889999999999999998888999999997654 345789999999999999999999998864 35689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 156 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV 156 (269)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred EEEEeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccc
Confidence 9999999999999997632 3689999999999999999999997 9999999999999999999999999998755
Q ss_pred cccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.... ......++..|+|||......++.++||||+|+++|||++ |++||...........+.. .. ....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~---~~-----~~~~ 228 (269)
T 4hcu_A 157 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST---GF-----RLYK 228 (269)
T ss_dssp CCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT---TC-----CCCC
T ss_pred cccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhc---Cc-----cCCC
Confidence 3322 1122334557999999988899999999999999999999 9999987654433222211 10 0111
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+ ... ...+.+++.+||+.||++|||+.|+++++....
T Consensus 229 ~---~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 229 P---RLA----STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp C---TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---CcC----CHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 1 111 234667888999999999999999999997543
No 49
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-40 Score=358.99 Aligned_cols=259 Identities=18% Similarity=0.343 Sum_probs=200.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCc----EEEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGT----FVAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||+||+|+.. +|+ .||+|.++... ....++|.+|++++++++|||||+++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence 45778899999999999999954 444 36888876443 2346789999999999999999999999874
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 89 --~~~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Df 161 (327)
T 3poz_A 89 --STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp --SSEEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred --CCeEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccC
Confidence 23789999999999999998642 3689999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++........ ....++..|+|||.+....++.++|||||||++|||+| |+.||.......+...+.. ..
T Consensus 162 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~~- 236 (327)
T 3poz_A 162 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK----GE- 236 (327)
T ss_dssp THHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT----TC-
T ss_pred cceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc----CC-
Confidence 999765432221 12234567999999998999999999999999999999 9999987655444333221 10
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW 763 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~ 763 (786)
.. .....+ ...+.+++.+||+.||++||++.||++++.........+
T Consensus 237 ---~~---~~~~~~----~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~~~ 283 (327)
T 3poz_A 237 ---RL---PQPPIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283 (327)
T ss_dssp ---CC---CCCTTB----CHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHHHH
T ss_pred ---CC---CCCccC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhhhh
Confidence 00 001112 235678888999999999999999999998665544333
No 50
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-40 Score=359.48 Aligned_cols=261 Identities=19% Similarity=0.348 Sum_probs=201.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc-----
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD----- 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~----- 548 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++..... ..+.|.+|++++++++|||||++++++.+....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 456888999999999999999976 7999999999755433 357799999999999999999999998652110
Q ss_pred ---------------------------------------------CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHH
Q 003926 549 ---------------------------------------------DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWT 583 (786)
Q Consensus 549 ---------------------------------------------~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~ 583 (786)
.......++|||||++|+|.+++.........++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 01122479999999999999999876544567888
Q ss_pred HHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccccccc-------------cccccccccc
Q 003926 584 QRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE-------------KVGHVIPYSG 650 (786)
Q Consensus 584 ~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~-------------~~~~~~~~~~ 650 (786)
.++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ......++..
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 8999999999999999997 99999999999999999999999999986654321 1123457788
Q ss_pred ccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHH
Q 003926 651 SIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMME 730 (786)
Q Consensus 651 ~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 730 (786)
|+|||.+....++.++|||||||++|||++|..|+.... ......... ..+. ........+.+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-----~~~~~~~~~--------~~~~----~~~~~~~~~~~ 304 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-----RIITDVRNL--------KFPL----LFTQKYPQEHM 304 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-----HHHHHHHTT--------CCCH----HHHHHCHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-----HHHHHhhcc--------CCCc----ccccCChhHHH
Confidence 999999988899999999999999999999977642111 111111000 0011 11223345678
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 731 VCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 731 l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
++.+||+.||++|||+.|+++|+||.
T Consensus 305 li~~~l~~~p~~Rps~~~~l~~~~f~ 330 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIENAIFE 330 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHHSTTCC
T ss_pred HHHHHccCCCCcCCCHHHHhhchhhh
Confidence 88999999999999999999988753
No 51
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=355.12 Aligned_cols=251 Identities=20% Similarity=0.310 Sum_probs=206.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+.+|+.+++.++|||||++++++.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------- 77 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD------- 77 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-------
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-------
Confidence 356888999999999999999965 69999999997542 2345778899999999999999999998864
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 78 ~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 78 AQQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred CCEEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecC
Confidence 45789999999999999999863 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+++..... .....++..|+|||.+....++.++|||||||++|||++|++||...........+ ....
T Consensus 152 ~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i---~~~~------- 219 (318)
T 1fot_A 152 FAKYVPDV--TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI---LNAE------- 219 (318)
T ss_dssp SCEECSSC--BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHCC-------
T ss_pred cceecCCc--cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCC-------
Confidence 98765432 23456788999999998888999999999999999999999999765443322211 1111
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||++|| ++.||++|+||..
T Consensus 220 --~~~p~~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 220 --LRFPPFF----NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp --CCCCTTS----CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred --CCCCCCC----CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence 0011111 23466788899999999999 9999999999874
No 52
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=358.21 Aligned_cols=254 Identities=20% Similarity=0.364 Sum_probs=201.0
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|...+.||+|+||.||+|+.. .+..||||+++.... ...+.|.+|++++++++|||||++++++..
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 121 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR------- 121 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-------
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------
Confidence 46778899999999999999974 355799999976532 234679999999999999999999999865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 196 (325)
T 3kul_A 122 GRLAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFG 196 (325)
T ss_dssp GGCCEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCS
T ss_pred CCccEEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCC
Confidence 356899999999999999997532 3699999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
+++....... .....++..|+|||.+....++.++|||||||++|||++ |+.||...........+.. ..
T Consensus 197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~---~~-- 271 (325)
T 3kul_A 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE---GY-- 271 (325)
T ss_dssp SCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT---TC--
T ss_pred cccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc---CC--
Confidence 9876533221 112233457999999988889999999999999999999 9999976554433222211 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.......++ ..+.+++.+||+.||++|||+.||++.|....
T Consensus 272 ------~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 272 ------RLPAPMGCP----HALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp ------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCCCCcC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 011111222 35678888999999999999999999997554
No 53
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.8e-41 Score=360.98 Aligned_cols=258 Identities=19% Similarity=0.303 Sum_probs=202.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++|||||++++++.+ .+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-------~~ 78 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GN 78 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-------SS
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-------CC
Confidence 357888999999999999999965 799999999875543 234668999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a 152 (323)
T 3tki_A 79 IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA 152 (323)
T ss_dssp EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeecc
Confidence 689999999999999999753 3589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccc---ccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAE---KVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
+...... ......++..|+|||.+....+ +.++|||||||++|||++|+.||.......... ...... .
T Consensus 153 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~~~~~~-----~ 225 (323)
T 3tki_A 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--SDWKEK-----K 225 (323)
T ss_dssp EECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH--HHHHTT-----C
T ss_pred ceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHHhcc-----c
Confidence 6543221 2234567888999999877665 779999999999999999999997543321110 000000 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
...++ .......+.+++.+||+.||++|||+.|+++|+|+.+..
T Consensus 226 ~~~~~------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 226 TYLNP------WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp TTSTT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred ccCCc------cccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 00011 011123456788899999999999999999999987543
No 54
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.4e-40 Score=365.44 Aligned_cols=258 Identities=19% Similarity=0.275 Sum_probs=204.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||+||+|+.+ +++.||||+++..... ..+.+.+|..++.++ +|||||++++++..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~------ 124 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------ 124 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC------
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE------
Confidence 457888999999999999999965 6889999999865332 235688999999887 89999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 125 -~~~~~lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 197 (396)
T 4dc2_A 125 -ESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 197 (396)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeec
Confidence 46789999999999999999753 3589999999999999999999998 9999999999999999999999999
Q ss_pred Cccccc-ccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH-----HHHHHHHHHHhc
Q 003926 631 NLPLLA-ENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-----LKNQLQAVVTAD 704 (786)
Q Consensus 631 Gl~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-----~~~~~~~~~~~~ 704 (786)
|+++.. ..........++..|+|||.+....|+.++|||||||++|||++|++||....... ....+.......
T Consensus 198 Gla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~ 277 (396)
T 4dc2_A 198 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 277 (396)
T ss_dssp TTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC
T ss_pred ceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc
Confidence 999753 23333445678899999999998899999999999999999999999996321100 001111111111
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV------EDVLWNLQFAAQ 758 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~------~evl~~l~~~~~ 758 (786)
. ...+.. ....+.+++.+||+.||++||++ .||++|+||...
T Consensus 278 ~--------~~~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 278 Q--------IRIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp C--------CCCCTT----SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred c--------cCCCCc----CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 0 111111 12356688889999999999984 899999998753
No 55
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.9e-40 Score=350.44 Aligned_cols=267 Identities=19% Similarity=0.293 Sum_probs=201.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||+||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 74 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------KKR 74 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-------SSC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-------CCe
Confidence 46788899999999999999988899999999975432 234778999999999999999999999865 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++ +|.+++.... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 75 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (288)
T 1ob3_A 75 LVLVFEHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148 (288)
T ss_dssp EEEEEECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred EEEEEEecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccc
Confidence 8999999985 9999987532 3589999999999999999999997 99999999999999999999999999986
Q ss_pred ccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-ccccccc-
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESARRS- 710 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~- 710 (786)
..... .......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+...... ....+..
T Consensus 149 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T 1ob3_A 149 AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228 (288)
T ss_dssp HHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhh
Confidence 54322 22233456788999998865 45899999999999999999999999765433222222111111 1000000
Q ss_pred ----ccccccc-------ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 ----MVDPAVN-------KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ----~~d~~~~-------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..++... ..........+.+++.+||+.||++|||+.|+++|+||.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~ 285 (288)
T 1ob3_A 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285 (288)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence 0111100 001111234567888999999999999999999998875
No 56
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.3e-40 Score=354.82 Aligned_cols=272 Identities=19% Similarity=0.319 Sum_probs=194.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++.... ...+.+.+|++++++++|||||++++++.. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~ 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-------EN 76 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-------TT
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-------CC
Confidence 457888999999999999999964 689999999975543 335779999999999999999999998864 45
Q ss_pred eEEEEEecCCCCChhHHhhcC---CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEG---HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
..++||||++ |+|.+++... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcC
Confidence 7899999998 6999988642 1223589999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-cccc
Q 003926 631 NLPLLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESA 707 (786)
Q Consensus 631 Gl~~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~ 707 (786)
|+++..... .......++..|+|||.+.. ..++.++|||||||++|||+||++||...........+...... ....
T Consensus 153 g~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 153 GLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232 (317)
T ss_dssp SSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTT
T ss_pred ccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhH
Confidence 998655322 22234456788999998865 46899999999999999999999999775544333322222111 1000
Q ss_pred cccc-----cccccc------------ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSM-----VDPAVN------------KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~-----~d~~~~------------~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+... ..+... ..........+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 300 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcc
Confidence 0000 000000 00000122357788899999999999999999999998754
No 57
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=352.61 Aligned_cols=277 Identities=18% Similarity=0.284 Sum_probs=206.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-----CChHHHHHHHHHHhcCC---CCCcceeeeeeeec
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-----HSTRNFMHHIELISKLR---HRHLVSALGHCFEC 545 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~~ 545 (786)
..++|+..+.||+|+||+||+|+. .+|+.||||++..... .....+.+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999995 5799999999875432 12357788888887775 99999999998752
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
.. ......++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 87 ~~--~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RT--DREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CS--SSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred CC--CCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 11 11225799999998 69999998643 23599999999999999999999998 99999999999999999999
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH-hc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT-AD 704 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~-~~ 704 (786)
||+|||+++............++..|+|||.+....++.++|||||||++|||++|++||...........+..... ..
T Consensus 160 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 160 KLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp EECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred EEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999999766544444556678899999999888999999999999999999999999977554333222222211 11
Q ss_pred ccccccc-------cccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 705 ESARRSM-------VDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 705 ~~~~~~~-------~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+... +.+... .....+....+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence 1111100 000000 00001123456788899999999999999999999987753
No 58
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.6e-41 Score=369.06 Aligned_cols=262 Identities=15% Similarity=0.235 Sum_probs=209.4
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
.++....++|+..+.||+|+||+||+|+.+ +++.||+|+++... ....+.+.+|+.+++.++|||||++++++.+
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~- 140 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 140 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-
Confidence 445556788999999999999999999975 58999999997532 2334568899999999999999999998865
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
.+..|+|||||++|+|.+++... .+++.....++.|++.||+|||+. +|+||||||+|||+|.++.+
T Consensus 141 ------~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 207 (410)
T 3v8s_A 141 ------DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHL 207 (410)
T ss_dssp ------SSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred ------CCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCE
Confidence 46789999999999999999753 488999999999999999999997 99999999999999999999
Q ss_pred cccCCCccccccccc--ccccccccccccCccccccCC----CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 626 KISSYNLPLLAENAE--KVGHVIPYSGSIDPTNSARGK----LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 626 kl~DfGl~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~----~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
||+|||+++...... ......++..|+|||.+.... |+.++|||||||++|||+||++||...+.......+..
T Consensus 208 kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~ 287 (410)
T 3v8s_A 208 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287 (410)
T ss_dssp EECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred EEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHh
Confidence 999999997654332 223456889999999987654 78999999999999999999999987654433322211
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE--RPSVEDVLWNLQFAA 757 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPt~~evl~~l~~~~ 757 (786)
..... .. |. ... ....+.+++.+||+.+|++ ||++.||++|+||..
T Consensus 288 ~~~~~-----~~--p~-~~~----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~ 335 (410)
T 3v8s_A 288 HKNSL-----TF--PD-DND----ISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335 (410)
T ss_dssp HHHHC-----CC--CT-TCC----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred ccccc-----cC--CC-ccc----ccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence 11000 00 00 001 1234667888999999988 999999999999875
No 59
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1e-40 Score=375.51 Aligned_cols=254 Identities=22% Similarity=0.374 Sum_probs=205.7
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+...++|+..+.||+|+||.||+|+.+++..||||+++... ...++|.+|+++|++++|||||++++++..
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-------- 254 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-------- 254 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC--------
Confidence 34456788889999999999999999888999999998643 457889999999999999999999998752
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++|||||++|+|.++++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 255 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~ 330 (454)
T 1qcf_A 255 EPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGL 330 (454)
T ss_dssp SSCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred CccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCC
Confidence 35799999999999999997531 23588999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++....... .....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......+...+.. ..
T Consensus 331 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~---~~----- 402 (454)
T 1qcf_A 331 ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER---GY----- 402 (454)
T ss_dssp GGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH---TC-----
T ss_pred ceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc---CC-----
Confidence 976543221 112234567999999988899999999999999999999 9999976554443332221 10
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+. .+..++ ..+.+++.+||+.||++|||+.+|++.|+
T Consensus 403 ~~~---~~~~~~----~~l~~li~~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 403 RMP---RPENCP----EELYNIMMRCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp CCC---CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC---CCCCCC----HHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 000 111222 35678888999999999999999999886
No 60
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=370.40 Aligned_cols=258 Identities=19% Similarity=0.261 Sum_probs=206.5
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||+||+|+. .+|+.||+|++...... ..+.+.+|++++++++|||||++++++.+ .
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-------~ 82 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-------E 82 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-------S
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-------C
Confidence 45688899999999999999985 47999999999765432 24568999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec---CCCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl~D 629 (786)
+..|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++ .++.+||+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~D 156 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLAD 156 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred CEEEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEcc
Confidence 6789999999999999999763 3589999999999999999999998 999999999999998 467899999
Q ss_pred CCccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 630 YNLPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 630 fGl~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
||++....... ......++..|+|||.+....|+.++||||+||++|||++|++||...........+.. ..
T Consensus 157 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~---~~---- 229 (444)
T 3soa_A 157 FGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA---GA---- 229 (444)
T ss_dssp CSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---TC----
T ss_pred CceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh---CC----
Confidence 99996554322 22345678899999999888899999999999999999999999977654443332221 10
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.....+. .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 230 ~~~~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 230 YDFPSPE-----WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp CCCCTTT-----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred CCCCccc-----cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence 0111111 01112356688889999999999999999999998654
No 61
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.7e-40 Score=347.03 Aligned_cols=258 Identities=15% Similarity=0.188 Sum_probs=209.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|...+.||+|+||.||+|+.. ++..||+|++........+.|.+|++++++++||||+++++++.. .+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~ 81 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-------NTDI 81 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------SSEE
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-------CCeE
Confidence 45788899999999999999965 578999999987666667889999999999999999999999865 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCCCc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYNL 632 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DfGl 632 (786)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 82 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~ 155 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGL 155 (277)
T ss_dssp EEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccc
Confidence 9999999999999998753 3589999999999999999999997 99999999999999 8889999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+.............++..|+|||... +.++.++||||||+++|||++|+.||...........+.. .. ...
T Consensus 156 ~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~----~~~- 226 (277)
T 3f3z_A 156 AARFKPGKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIRE---GT----FTF- 226 (277)
T ss_dssp CEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC----CCC-
T ss_pred ceeccCccchhccCCCCCccChHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh---CC----CCC-
Confidence 87655444444556788899999875 4589999999999999999999999976554333222211 00 000
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
...... .....+.+++.+||+.||++|||+.|+++|.||.+...
T Consensus 227 ~~~~~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 227 PEKDWL----NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp CHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred Cchhhh----cCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence 000000 11235678888999999999999999999999987544
No 62
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.8e-41 Score=359.57 Aligned_cols=255 Identities=18% Similarity=0.266 Sum_probs=205.9
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++|||||++++++..
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------- 80 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT------- 80 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------
Confidence 35688899999999999999996 579999999987532 2334679999999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+ +|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||+++++.+||+|||
T Consensus 81 ~~~~~lv~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG 153 (336)
T 3h4j_B 81 PTDIVMVIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFG 153 (336)
T ss_dssp SSEEEEEECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSS
T ss_pred CCEEEEEEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEec
Confidence 45689999999 68999988753 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++.............++..|+|||.+.+..+ +.++|||||||++|||++|+.||.......+.. ....
T Consensus 154 ~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-----------~i~~ 222 (336)
T 3h4j_B 154 LSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-----------KVNS 222 (336)
T ss_dssp CTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-----------CCCS
T ss_pred cceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-----------HHHc
Confidence 9976655544455678889999999877665 789999999999999999999997543211100 0000
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
. ....+ ......+.+++.+||+.||.+|||+.|+++|+||....+
T Consensus 223 ~-~~~~p----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~ 267 (336)
T 3h4j_B 223 C-VYVMP----DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267 (336)
T ss_dssp S-CCCCC----TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred C-CCCCc----ccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCc
Confidence 0 00111 112235668888999999999999999999999976433
No 63
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.4e-40 Score=370.86 Aligned_cols=253 Identities=20% Similarity=0.320 Sum_probs=208.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.. .
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-------~ 88 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-------P 88 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-------C
Confidence 56788899999999999999965 79999999997542 2345679999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~ 162 (476)
T 2y94_A 89 SDIFMVMEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGL 162 (476)
T ss_dssp SEEEEEEECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSS
T ss_pred CEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccc
Confidence 5789999999999999999753 3689999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.............++..|+|||.+....+ +.++|||||||++|||++|+.||.......+...+.. .. .
T Consensus 163 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~----~~-----~ 233 (476)
T 2y94_A 163 SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD----GI-----F 233 (476)
T ss_dssp CEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT----TC-----C
T ss_pred hhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc----CC-----c
Confidence 976655444455678889999999877665 6899999999999999999999987654333222111 00 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..| ... ...+.+++.+||+.||++|||+.||++|+|+.+.
T Consensus 234 ~~p---~~~----s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 234 YTP---QYL----NPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp CCC---TTC----CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred CCC---ccC----CHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 001 111 1346678889999999999999999999998764
No 64
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=362.20 Aligned_cols=262 Identities=22% Similarity=0.363 Sum_probs=205.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|...+.||+|+||+||+|++. ++..||||+++.... .....|.+|+.++++++|||||++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 356778899999999999999853 467899999975432 234579999999999999999999999864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCC----CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGH----AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL- 623 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~- 623 (786)
....++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+. +|+||||||+|||++.++
T Consensus 146 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 219 (367)
T 3l9p_A 146 ---SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 219 (367)
T ss_dssp ---SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred ---CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCC
Confidence 345799999999999999997532 124589999999999999999999998 999999999999999554
Q ss_pred --cccccCCCcccccccc---cccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHH
Q 003926 624 --VAKISSYNLPLLAENA---EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 624 --~~kl~DfGl~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 697 (786)
.+||+|||+++..... .......++..|+|||.+....++.++|||||||++|||+| |++||.......+...+
T Consensus 220 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i 299 (367)
T 3l9p_A 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 299 (367)
T ss_dssp TCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred CceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 5999999998644222 12223445678999999988899999999999999999998 99999876554433322
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
.. .. .+.....++ ..+.+++.+||+.||++|||+.||+++++...+....
T Consensus 300 ~~---~~--------~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~ 349 (367)
T 3l9p_A 300 TS---GG--------RMDPPKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349 (367)
T ss_dssp HT---TC--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred Hc---CC--------CCCCCccCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence 11 10 011111222 3467888899999999999999999999987664433
No 65
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.8e-41 Score=368.38 Aligned_cols=255 Identities=18% Similarity=0.354 Sum_probs=203.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||.||+|+.. +++.||||+++..... ..++|.+|+++|++++|||||+++|+|.. .+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~~ 185 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-------KQ 185 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-------SS
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-------CC
Confidence 456778899999999999999976 7899999998754321 23568999999999999999999999864 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 186 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s 260 (377)
T 3cbl_A 186 PIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMS 260 (377)
T ss_dssp SCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred CcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCc
Confidence 689999999999999999753 23589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
+........ ....++..|+|||.+..+.++.++|||||||++|||+| |+.|+...........+.. . .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~----~--~-- 332 (377)
T 3cbl_A 261 REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK----G--G-- 332 (377)
T ss_dssp EECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT----T--C--
T ss_pred eecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C--C--
Confidence 654322111 11123456999999988889999999999999999999 9999977654443322211 0 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. ...+..++ ..+.+++.+||+.||++|||+.||++.|....
T Consensus 333 ~---~~~~~~~~----~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 333 R---LPCPELCP----DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp C---CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---CCCCCCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 0 01111222 35667888999999999999999999997543
No 66
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.1e-40 Score=346.34 Aligned_cols=253 Identities=17% Similarity=0.279 Sum_probs=185.4
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.. .
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 85 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-------K 85 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-------C
Confidence 5688899999999999999985 4789999999975432 235678999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+ +|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+
T Consensus 86 ~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 158 (275)
T 2eue_A 86 DEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp SCEEEEEECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSC
T ss_pred CeEEEEehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeeccc
Confidence 5689999999 67888888753 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.............++..|+|||......+ +.++|||||||++|||++|+.||...........+.. .. .
T Consensus 159 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~----~-- 229 (275)
T 2eue_A 159 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN---GV----Y-- 229 (275)
T ss_dssp C---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TC----C--
T ss_pred ceeccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CC----C--
Confidence 876554444444567788999999876655 7899999999999999999999987654433322211 10 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
...... ...+.+++.+||+.||++|||+.|+++|.||....
T Consensus 230 ---~~~~~~----~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~~ 270 (275)
T 2eue_A 230 ---TLPKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDL 270 (275)
T ss_dssp ---CCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred ---CCCccC----CHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecccc
Confidence 011111 23466788899999999999999999999987643
No 67
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.6e-40 Score=351.54 Aligned_cols=263 Identities=21% Similarity=0.369 Sum_probs=198.3
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhc--CCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||+||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++..... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~---~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH---SST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET---TEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC---CCc
Confidence 45788899999999999999988 5899999998653 34567777777766 899999999999865322 235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-----CCCccccCCCCCceeecCCCccccc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
..++||||+++|+|.++++. ..+++..++.++.|++.||+|||... ..+|+||||||+|||++.++.+||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred eeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence 68999999999999999964 35899999999999999999999211 2399999999999999999999999
Q ss_pred CCCcccccccccc-----cccccccccccCccccccC------CCCcccceeehhHHHHHHHhC----------CCCCCC
Q 003926 629 SYNLPLLAENAEK-----VGHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVG----------RPLKSR 687 (786)
Q Consensus 629 DfGl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG----------~~p~~~ 687 (786)
|||+++....... .....++..|+|||.+... .++.++|||||||++|||+|| ++||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 9999865533221 1223578889999998765 455799999999999999999 778754
Q ss_pred chh-HHHHHHHHHHHHhccccccccccccccc-cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 688 KEV-DLLKNQLQAVVTADESARRSMVDPAVNK-ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 688 ~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
... ......+....... ...+.... .........+.+++.+||+.||++|||+.||++.|..
T Consensus 236 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 236 VVPNDPSFEDMRKVVCVD------QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TSCSSCCHHHHHHHHTTS------CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cCCCCcchhhhhHHHhcc------CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 211 10111111111111 01111111 1223456678899999999999999999999999863
No 68
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.2e-40 Score=355.80 Aligned_cols=267 Identities=17% Similarity=0.290 Sum_probs=202.9
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.... ......
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT---SVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC---SSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCC---CCCceE
Confidence 456888999999999999999876 7899999997543 22345677999999999999999999987532 113457
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-------CCCccccCCCCCceeecCCCccccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-------VPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-------~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
++||||+++|+|.+++... .++|..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999763 4899999999999999999999852 3489999999999999999999999
Q ss_pred CCCcccccccccc---cccccccccccCccccccC-----CCCcccceeehhHHHHHHHhCCCCCCCchhH---------
Q 003926 629 SYNLPLLAENAEK---VGHVIPYSGSIDPTNSARG-----KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD--------- 691 (786)
Q Consensus 629 DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~-----~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~--------- 691 (786)
|||+++....... .....++..|+|||.+... .++.++|||||||++|||+||++||......
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999965543221 2234578889999988652 4567899999999999999999998643210
Q ss_pred ----HHHHHHHHHHHhcccccccccccccccc-CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 692 ----LLKNQLQAVVTADESARRSMVDPAVNKA-CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 692 ----~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
......... . .....+..... ........+.+++.+||+.||++|||+.||++.|+..+.
T Consensus 254 ~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 254 GQHPSLEDMQEVV-V------HKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CSSCCHHHHHHHH-T------TSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCchhhhhhhh-h------cccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 001111100 0 00111111111 112345568889999999999999999999999985543
No 69
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.3e-41 Score=361.48 Aligned_cols=255 Identities=22% Similarity=0.350 Sum_probs=207.8
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeecccc
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~ 548 (786)
...++|...+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|.++++++ +|||||++++++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~---- 89 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT---- 89 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe----
Confidence 34578889999999999999999975 68999999997542 23456788999999886 99999999998864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 90 ---~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~ 160 (345)
T 1xjd_A 90 ---KENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIA 160 (345)
T ss_dssp ---SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred ---CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEe
Confidence 45789999999999999999753 3589999999999999999999998 99999999999999999999999
Q ss_pred CCCccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 629 SYNLPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 629 DfGl~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|||+++.... ........++..|+|||.+....++.++|||||||++|||++|++||...+...+...+. ...
T Consensus 161 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~~--- 234 (345)
T 1xjd_A 161 DFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR---MDN--- 234 (345)
T ss_dssp CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC---
T ss_pred EChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---hCC---
Confidence 9999865422 223344567889999999988889999999999999999999999998765443332221 111
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVE-DVLWNLQFAA 757 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~-evl~~l~~~~ 757 (786)
+..+... ...+.+++.+||+.||++||++. ||++|+||..
T Consensus 235 ------~~~p~~~----s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~ 275 (345)
T 1xjd_A 235 ------PFYPRWL----EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275 (345)
T ss_dssp ------CCCCTTS----CHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred ------CCCCccc----CHHHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence 1111111 23566788899999999999998 9999999865
No 70
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=359.62 Aligned_cols=249 Identities=18% Similarity=0.175 Sum_probs=193.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ....+.+|+..+.++ +|||||+++++|.+ .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-------~ 129 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-------G 129 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-------C
Confidence 56888999999999999999976 7999999998754332 234566677666665 99999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+ +|+|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~ 203 (311)
T 3p1a_A 130 GILYLQTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL 203 (311)
T ss_dssp TEEEEEEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred CEEEEEEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEcccee
Confidence 6789999999 679999887532 4699999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+.............++..|+|||.+.+ .++.++|||||||++|||++|..|+...... . .... ...
T Consensus 204 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~----~~~~-------~~~ 269 (311)
T 3p1a_A 204 LVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW--Q----QLRQ-------GYL 269 (311)
T ss_dssp CEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH--H----HHTT-------TCC
T ss_pred eeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH--H----HHhc-------cCC
Confidence 876544433444567889999998764 7999999999999999999997665433211 0 0000 011
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+..... ....+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 270 ~~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~ 309 (311)
T 3p1a_A 270 PPEFTAG----LSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309 (311)
T ss_dssp CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred CcccccC----CCHHHHHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence 1111111 224567888899999999999999999998864
No 71
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.4e-40 Score=356.89 Aligned_cols=250 Identities=16% Similarity=0.242 Sum_probs=206.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.. .
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~ 113 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-------N 113 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-------C
Confidence 56888899999999999999965 69999999997542 2445789999999999999999999998864 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 114 ~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~ 187 (350)
T 1rdq_E 114 SNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187 (350)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccccc
Confidence 5789999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++..... .....++..|+|||.+....++.++|||||||++|||++|++||...........+. ...
T Consensus 188 a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~~-------- 254 (350)
T 1rdq_E 188 AKRVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV---SGK-------- 254 (350)
T ss_dssp CEECSSC--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC--------
T ss_pred ceeccCC--cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHH---cCC--------
Confidence 8755432 234567889999999988889999999999999999999999997655443322221 110
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||++||+ +.||++|+||..
T Consensus 255 -~~~p~~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 255 -VRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp -CCCCTTC----CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred -CCCCCCC----CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence 0111111 235668888999999999998 999999999875
No 72
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.4e-40 Score=373.65 Aligned_cols=254 Identities=17% Similarity=0.272 Sum_probs=198.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||+++... ......+.+|++++++++|||||++++++..
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------- 219 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT------- 219 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-------
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-------
Confidence 467888999999999999999954 69999999997542 2334668899999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccCCCCCceeecCCCcccccCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++|||||++|+|.+++... ..+++.....++.|++.||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 220 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 220 HDRLCFVMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp TTEEEEEECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCC
T ss_pred CCEEEEEEeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccC
Confidence 45689999999999999999753 368999999999999999999997 6 8999999999999999999999999
Q ss_pred Ccccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++... .........++..|+|||.+....|+.++|||||||++|||++|+.||...........+. ...
T Consensus 294 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~~----- 365 (446)
T 4ejn_A 294 GLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---MEE----- 365 (446)
T ss_dssp CCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC-----
T ss_pred CCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH---hCC-----
Confidence 9986532 2223345568889999999988899999999999999999999999997765443332221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~ 758 (786)
...+... ...+.+++.+||+.||++|| ++.|+++|+||...
T Consensus 366 ----~~~p~~~----~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 366 ----IRFPRTL----GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp ----CCCCTTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred ----CCCCccC----CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 0011111 23566888899999999999 99999999998754
No 73
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.8e-40 Score=357.43 Aligned_cols=253 Identities=20% Similarity=0.297 Sum_probs=207.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|..+++.+ +||||+++++++..
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~------ 92 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT------ 92 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC------
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc------
Confidence 467889999999999999999976 48899999997542 24457789999999998 89999999998764
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 93 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 165 (353)
T 2i0e_A 93 -MDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADF 165 (353)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeC
Confidence 45789999999999999999753 3589999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++... .........++..|+|||.+....++.++|||||||++|||++|++||.......+...+. ...
T Consensus 166 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~~~----- 237 (353)
T 2i0e_A 166 GMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM---EHN----- 237 (353)
T ss_dssp TTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC-----
T ss_pred CcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH---hCC-----
Confidence 9987532 2223345568889999999988889999999999999999999999998765443332221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPS-----VEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt-----~~evl~~l~~~~ 757 (786)
...+.. ....+.+++.+||+.||++||+ +.||++|+||..
T Consensus 238 ----~~~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 238 ----VAYPKS----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp ----CCCCTT----SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred ----CCCCCC----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 011111 1235668888999999999995 699999999864
No 74
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.9e-40 Score=369.36 Aligned_cols=252 Identities=21% Similarity=0.379 Sum_probs=202.8
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|... |+.||||+++... ..+.|.+|+++|++++|||||+++|+|.+. ....
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~ 262 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------KGGL 262 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT------TSCE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC------CCce
Confidence 456778899999999999999986 7899999997643 467899999999999999999999998651 2358
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++|||||++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 338 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccc
Confidence 99999999999999998632 23479999999999999999999998 999999999999999999999999999875
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ....++..|+|||.+....++.++|||||||++|||+| |+.||.......+...+.. . . .+
T Consensus 339 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~----~---~----~~ 405 (450)
T 1k9a_A 339 ASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----G---Y----KM 405 (450)
T ss_dssp CC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT----T---C----CC
T ss_pred ccccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C---C----CC
Confidence 43222 12244567999999988899999999999999999999 9999976544433322211 0 0 01
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+..++ ..+.+++.+||+.||++|||+.|+++.|+...
T Consensus 406 ~~p~~~~----~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 406 DAPDGCP----PAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp CCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCcCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1112222 35678888999999999999999999887443
No 75
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.6e-40 Score=355.71 Aligned_cols=256 Identities=20% Similarity=0.359 Sum_probs=199.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcE----EEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF----VAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||+||+|+.. +++. ||+|.+..... ...+.+.+|+.++++++|||||+++++|..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 45778899999999999999964 4543 88888764432 334678899999999999999999998753
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 87 --~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 159 (325)
T 3kex_A 87 --SSLQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADF 159 (325)
T ss_dssp --SSEEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSC
T ss_pred --CccEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCC
Confidence 4589999999999999999763 23688999999999999999999998 9999999999999999999999999
Q ss_pred Ccccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++....... .....++..|+|||.+..+.++.++|||||||++|||+| |+.||...........+.. ..
T Consensus 160 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~-- 234 (325)
T 3kex_A 160 GVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK---GE-- 234 (325)
T ss_dssp SGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT---TC--
T ss_pred CcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc---CC--
Confidence 99976543221 223345568999999988899999999999999999999 9999976554433322211 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
....+. .++ ..+.+++.+||+.||++|||+.|+++++.......
T Consensus 235 ---~~~~~~---~~~----~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 235 ---RLAQPQ---ICT----IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp ---BCCCCT---TBC----TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred ---CCCCCC---cCc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 000111 111 23557888999999999999999999997654433
No 76
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=359.70 Aligned_cols=257 Identities=18% Similarity=0.277 Sum_probs=190.4
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..+.|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++|||||++++++.. .+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~ 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET-------PT 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC-------SS
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec-------CC
Confidence 3567888999999999999999976 58899999997543 34678899999999999999999999865 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~Df 630 (786)
..++||||+++|+|.+++... ..+++.....++.|+++||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 122 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 122 EISLVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp EEEEEECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccC
Confidence 689999999999999999753 3589999999999999999999997 9999999999999975 889999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|+++............++..|+|||.+....++.++|||||||++|||++|+.||........ ......... ..
T Consensus 196 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~~i~~~~----~~ 269 (349)
T 2w4o_A 196 GLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--MFRRILNCE----YY 269 (349)
T ss_dssp C----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--HHHHHHTTC----CC
T ss_pred ccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--HHHHHHhCC----Cc
Confidence 998766544333445678899999999888899999999999999999999999865433221 111111110 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...+ ........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 270 ~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 311 (349)
T 2w4o_A 270 FISP-----WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311 (349)
T ss_dssp CCTT-----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred cCCc-----hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 0111 11122235678888999999999999999999988653
No 77
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.2e-41 Score=355.40 Aligned_cols=259 Identities=19% Similarity=0.354 Sum_probs=199.1
Q ss_pred cCCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||+||+|++ .+++.||||++........+.|.+|++++++++||||++++++|....
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 84 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG----- 84 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH-----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----
Confidence 4577889999999999999985 268999999998655444578999999999999999999999886421
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CCceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 235799999999999999997642 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHH------------
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKN------------ 695 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~------------ 695 (786)
++........ .....++..|+|||.+....++.++||||||+++|||+||..|+..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 9876533221 112234456999999988899999999999999999999999886533221110
Q ss_pred HHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 696 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+...... .........+ ...+.+++.+||+.||++|||+.|+++++...
T Consensus 240 ~~~~~~~~-------~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 240 HLIELLKN-------NGRLPRPDGC----PDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HHHHHHHT-------TCCCCCCTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHhc-------cCcCCCCcCc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 00000000 0001111122 24577888999999999999999999999744
No 78
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3e-40 Score=355.50 Aligned_cols=253 Identities=15% Similarity=0.252 Sum_probs=196.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe----cCCcEEEEEEecccCC----CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|++++++++|||||++++++..
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 92 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT--- 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC---
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc---
Confidence 35688899999999999999986 4789999999976532 234568899999999999999999998865
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 93 ----~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl 162 (327)
T 3a62_A 93 ----GGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKL 162 (327)
T ss_dssp ----SSCEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEE
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEE
Confidence 45689999999999999999753 3588999999999999999999997 9999999999999999999999
Q ss_pred cCCCccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 628 SSYNLPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 628 ~DfGl~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
+|||+++.... ........++..|+|||.+....++.++|||||||++|||++|++||...........+. ...
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~---~~~-- 237 (327)
T 3a62_A 163 TDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL---KCK-- 237 (327)
T ss_dssp CCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---HTC--
T ss_pred EeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hCC--
Confidence 99999864322 222234467889999999988889999999999999999999999998655433322211 111
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~ 757 (786)
...+... ...+.+++.+||+.||++|| ++.|+++|+||..
T Consensus 238 -------~~~p~~~----~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 238 -------LNLPPYL----TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp -------CCCCTTS----CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred -------CCCCCCC----CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence 0011111 23566788899999999999 8899999999864
No 79
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=347.93 Aligned_cols=254 Identities=20% Similarity=0.370 Sum_probs=194.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||+||+|+.. ++.||||++... ...+.|.+|++++++++|||||+++|++.+ ..+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---------~~~ 75 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN---------PVC 75 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT---------TTE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---------CcE
Confidence 45777899999999999999975 788999998643 345789999999999999999999998752 368
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc-ccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-AKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-~kl~DfGl~~~ 635 (786)
+||||+++|+|.+++........+++...+.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 99999999999999986543345789999999999999999999943348999999999999998876 79999999865
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPA 715 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 715 (786)
.... .....++..|+|||......++.++|||||||++|||+||+.||......... .... .... . .+.
T Consensus 156 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~-~~~~--~-----~~~ 224 (307)
T 2eva_A 156 IQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-IMWA-VHNG--T-----RPP 224 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH-HHHH-HHTT--C-----CCC
T ss_pred cccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH-HHHH-HhcC--C-----CCC
Confidence 4322 12335678899999998888999999999999999999999999753322111 1111 1110 0 111
Q ss_pred ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 716 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 716 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....++ ..+.+++.+||+.||++|||+.|+++++....
T Consensus 225 ~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 225 LIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp CBTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred cccccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 111222 35667888999999999999999999997543
No 80
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.4e-40 Score=377.00 Aligned_cols=260 Identities=19% Similarity=0.286 Sum_probs=209.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+++|++++|||||++++++..
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~------- 255 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET------- 255 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-------
Confidence 466888999999999999999975 79999999997542 2345678999999999999999999998764
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+|||||++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 256 ~~~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFG 331 (576)
T 2acx_A 256 KDALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLG 331 (576)
T ss_dssp SSEEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecc
Confidence 457899999999999999997642 23589999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+++............++..|+|||.+....|+.++|||||||++|||++|++||...........+........
T Consensus 332 la~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~------ 405 (576)
T 2acx_A 332 LAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP------ 405 (576)
T ss_dssp TCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC------
T ss_pred cceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc------
Confidence 99766544444455788999999999888899999999999999999999999976432111111111111111
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~ 758 (786)
..... .....+.+++.+||+.||++|| ++.||++|+||...
T Consensus 406 --~~~p~----~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 406 --EEYSE----RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp --CCCCT----TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred --ccCCc----cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 01111 1123567888899999999999 78999999998753
No 81
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-40 Score=362.62 Aligned_cols=267 Identities=21% Similarity=0.341 Sum_probs=208.5
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCccee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSA 538 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l 538 (786)
+...+++...++|+..+.||+|+||.||+|++ .+++.||||+++..... ..+.|.+|+++++++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44556666788899999999999999999974 24689999999764332 246799999999999 89999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCC------------------------------------------
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA------------------------------------------ 576 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~------------------------------------------ 576 (786)
+++|.+. ....++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3vhe_A 92 LGACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS 165 (359)
T ss_dssp EEEECST------TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------
T ss_pred eeeeecC------CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccc
Confidence 9998641 3457999999999999999976432
Q ss_pred ---------------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 577 ---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 577 ---------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 242 (359)
T 3vhe_A 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARD 242 (359)
T ss_dssp ------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred ccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceee
Confidence 11289999999999999999999998 999999999999999999999999999965
Q ss_pred ccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhH-HHHHHHHHHHHhccccccc
Q 003926 636 AENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVVTADESARRS 710 (786)
Q Consensus 636 ~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 710 (786)
..... ......++..|+|||.+....++.++|||||||++|||+| |++||...... .....+. ...
T Consensus 243 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~---~~~------ 313 (359)
T 3vhe_A 243 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK---EGT------ 313 (359)
T ss_dssp TTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH---HTC------
T ss_pred ecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH---cCC------
Confidence 43221 1223445678999999988899999999999999999999 99999764422 2211111 110
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.....++ ..+.+++.+||+.||++|||+.||++++....
T Consensus 314 --~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 314 --RMRAPDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp --CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 001111122 35678888999999999999999999997543
No 82
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.5e-40 Score=345.88 Aligned_cols=253 Identities=21% Similarity=0.325 Sum_probs=202.0
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|...++..||||+++... ...++|.+|++++++++||||+++++++.. .+..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~ 94 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-------QRPI 94 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEec-------CCCe
Confidence 45678889999999999999999888899999998654 345789999999999999999999998864 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++... ...+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 95 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 169 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRY 169 (283)
T ss_dssp EEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred EEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccc
Confidence 9999999999999999753 23589999999999999999999997 999999999999999999999999999865
Q ss_pred cccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
...... .....++..|+|||......++.++||||||+++|||+| |+.||...........+.. .. . ..
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~---~~----~-~~ 241 (283)
T 3gen_A 170 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ---GL----R-LY 241 (283)
T ss_dssp BCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT---TC----C-CC
T ss_pred ccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhc---cc----C-CC
Confidence 533221 122234557999999988889999999999999999999 9999976554333222211 10 0 00
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+ ... ...+.+++.+||+.||++|||+.|+++++...
T Consensus 242 ~~---~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 242 RP---HLA----SEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp CC---TTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC---CcC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 11 111 13566788899999999999999999999744
No 83
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.1e-39 Score=351.55 Aligned_cols=256 Identities=13% Similarity=0.125 Sum_probs=202.0
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++++ +||||+++++++.. .+.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-------~~~ 79 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-------GKY 79 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-------TTE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEec-------CCc
Confidence 5688889999999999999995 579999999987543 234688999999999 99999999998875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc-----ccccC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-----AKISS 629 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-----~kl~D 629 (786)
.++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~D 153 (330)
T 2izr_A 80 NAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIID 153 (330)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECC
T ss_pred cEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEE
Confidence 89999999 99999999863 24699999999999999999999997 9999999999999999887 99999
Q ss_pred CCcccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 630 YNLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 630 fGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
||+++....... .....++..|+|||......++.++|||||||++|||++|+.||...........+....
T Consensus 154 Fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~ 233 (330)
T 2izr_A 154 FALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG 233 (330)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHH
T ss_pred cccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHH
Confidence 999975433221 134567889999999988889999999999999999999999997643333222222221
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...... ..+.....+ + .+.+++..||+.||.+||++.+|++.+...
T Consensus 234 ~~~~~~----~~~~~~~~~----p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 234 DTKRAT----PIEVLCENF----P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHHHS----CHHHHTTTC----H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hhhccC----CHHHHhccC----h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 111000 000001111 1 577888899999999999999999988744
No 84
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7e-40 Score=346.79 Aligned_cols=268 Identities=19% Similarity=0.274 Sum_probs=201.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++.. .+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------DK 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TT
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-------CC
Confidence 46788899999999999999965 6899999999755432 24678999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++ ++.+++... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 75 ~~~lv~e~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 148 (292)
T 3o0g_A 75 KLTLVFEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA 148 (292)
T ss_dssp EEEEEEECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 78999999986 666665542 23689999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc-cccccccccccccCccccccCC-CCcccceeehhHHHHHHHhCCCC-CCCchhHHHHHHHHHHHH-hcccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVVT-ADESARR 709 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~ElltG~~p-~~~~~~~~~~~~~~~~~~-~~~~~~~ 709 (786)
+..... .......++..|+|||.+.... ++.++|||||||++|||++|..| +...........+..... .....+.
T Consensus 149 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~ 228 (292)
T 3o0g_A 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228 (292)
T ss_dssp EECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT
T ss_pred eecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhh
Confidence 655322 2223445678899999887655 89999999999999999998766 444433332222222111 1111111
Q ss_pred ccc---c----c-----cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMV---D----P-----AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~---d----~-----~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... + + .............+.+++.+||+.||++|||++|+++|+||..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 288 (292)
T 3o0g_A 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp TGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred hhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence 000 0 0 0000011122345678888999999999999999999998753
No 85
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.4e-40 Score=344.64 Aligned_cols=255 Identities=20% Similarity=0.342 Sum_probs=205.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.. ++..||||++.... ......+.+|++++++++||||+++++++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 80 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD------- 80 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-------
Confidence 467888999999999999999865 57899999986532 2335679999999999999999999999865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg 154 (279)
T 3fdn_A 81 ATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154 (279)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCC
T ss_pred CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecc
Confidence 45689999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
++....... .....++..|+|||......++.++||||||+++|||++|+.||...........+.. ..
T Consensus 155 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~------- 223 (279)
T 3fdn_A 155 WSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR---VE------- 223 (279)
T ss_dssp EESCC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TC-------
T ss_pred ccccCCccc-ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh---CC-------
Confidence 985443322 2334567889999999888899999999999999999999999987654433222211 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
...+... ...+.+++.+||+.||++|||+.||++|+|+.....
T Consensus 224 --~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 224 --FTFPDFV----TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp --CCCCTTS----CHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred --CCCCCcC----CHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 0111111 234567888999999999999999999999887543
No 86
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.9e-40 Score=366.08 Aligned_cols=273 Identities=16% Similarity=0.245 Sum_probs=203.5
Q ss_pred hcCCCccCccCCC--CCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEG--SQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+| +||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 97 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA------ 97 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE------
Confidence 3568889999999 99999999975 6999999999765432 23568889999999999999999999875
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++|||||++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~df 172 (389)
T 3gni_B 98 -DNELWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGL 172 (389)
T ss_dssp -TTEEEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCG
T ss_pred -CCEEEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccc
Confidence 457899999999999999997642 24589999999999999999999998 9999999999999999999999999
Q ss_pred Cccccccccc--------ccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHH
Q 003926 631 NLPLLAENAE--------KVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQA 699 (786)
Q Consensus 631 Gl~~~~~~~~--------~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~ 699 (786)
|.+....... ......++..|+|||.+.. ..++.++|||||||++|||++|++||....... ....+..
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 252 (389)
T 3gni_B 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG 252 (389)
T ss_dssp GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---
T ss_pred ccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence 9975432111 1112356677999999876 579999999999999999999999997543221 1111110
Q ss_pred HHHhc--------cc------------cccccc---ccc------ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 003926 700 VVTAD--------ES------------ARRSMV---DPA------VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 750 (786)
Q Consensus 700 ~~~~~--------~~------------~~~~~~---d~~------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl 750 (786)
..... +. ...+.. .+. ............+.+++.+||+.||++|||+.|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell 332 (389)
T 3gni_B 253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL 332 (389)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 00000 00 000000 000 00001122234678899999999999999999999
Q ss_pred HHHHHHHHh
Q 003926 751 WNLQFAAQV 759 (786)
Q Consensus 751 ~~l~~~~~~ 759 (786)
+|+||.+..
T Consensus 333 ~hp~f~~~~ 341 (389)
T 3gni_B 333 NHSFFKQIK 341 (389)
T ss_dssp TSGGGGGC-
T ss_pred cCHHHHHHh
Confidence 999987543
No 87
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-40 Score=364.84 Aligned_cols=278 Identities=18% Similarity=0.286 Sum_probs=199.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~ 550 (786)
..++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.++++++ |||||++++++...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~----- 81 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD----- 81 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT-----
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC-----
Confidence 356788999999999999999985 4699999999865432 23456889999999997 99999999988641
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.....|+|||||+ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 153 (388)
T 3oz6_A 82 NDRDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADF 153 (388)
T ss_dssp TSSCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred CCCEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCC
Confidence 2346899999998 6999999752 589999999999999999999998 9999999999999999999999999
Q ss_pred Ccccccccc----------------------cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCC
Q 003926 631 NLPLLAENA----------------------EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSR 687 (786)
Q Consensus 631 Gl~~~~~~~----------------------~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~ 687 (786)
|+++..... .......++..|+|||.+.. ..|+.++|||||||++|||++|++||..
T Consensus 154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 998654221 11223467888999998865 5799999999999999999999999976
Q ss_pred chhHHHHHHHHHHHHhc-cccccccccc-----------------cccccCcH-------------HHHHHHHHHHHHhc
Q 003926 688 KEVDLLKNQLQAVVTAD-ESARRSMVDP-----------------AVNKACLD-------------ESLKTMMEVCVRCL 736 (786)
Q Consensus 688 ~~~~~~~~~~~~~~~~~-~~~~~~~~d~-----------------~~~~~~~~-------------~~~~~~~~l~~~Cl 736 (786)
.+.......+....... ......+..+ ........ .....+.+++.+||
T Consensus 234 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 234 SSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 54433222222211110 0000000000 00000000 11235778999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 003926 737 LKNPAERPSVEDVLWNLQFAAQVQDAWHS 765 (786)
Q Consensus 737 ~~dP~~RPt~~evl~~l~~~~~~~~~~~~ 765 (786)
+.||++|||+.|+++|+|+.......|++
T Consensus 314 ~~dP~~R~t~~e~l~Hp~~~~~~~~~~~~ 342 (388)
T 3oz6_A 314 QFNPNKRISANDALKHPFVSIFHNPNEEP 342 (388)
T ss_dssp CSSGGGSCCHHHHTTSTTTTTTCCGGGCC
T ss_pred ccCcccCCCHHHHhCCHHHHHhcCCccCC
Confidence 99999999999999999987654455544
No 88
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.4e-40 Score=373.91 Aligned_cols=253 Identities=21% Similarity=0.380 Sum_probs=205.3
Q ss_pred HhcCCCccCccCCCCCceeEEEEecC-CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..++|...+.||+|+||.||+|+.+. +..||||+++... ...++|.+|+++|++++|||||+++|+|.. .+
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------~~ 289 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------EP 289 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SS
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEec-------CC
Confidence 34567888999999999999999764 8899999997643 346889999999999999999999999865 35
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++|||||++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred cEEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 6899999999999999997632 34689999999999999999999997 9999999999999999999999999999
Q ss_pred cccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 634 LLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
+....... .....++..|+|||.+....++.++|||||||++|||+| |+.||.......+...+.. . .
T Consensus 366 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~---~-- 436 (495)
T 1opk_A 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----D---Y-- 436 (495)
T ss_dssp ECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT----T---C--
T ss_pred eeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C---C--
Confidence 76543221 112233457999999988889999999999999999999 9999977655444332211 0 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.......++ ..+.+++.+||+.||++|||+.||++.++
T Consensus 437 --~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 437 --RMERPEGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp --CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCCCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 011111222 35678888999999999999999999886
No 89
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.5e-40 Score=347.87 Aligned_cols=256 Identities=16% Similarity=0.238 Sum_probs=199.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|...+.||+|+||.||+|+.. ++..||||++..... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 94 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-------YHN 94 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------SSE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-------CCe
Confidence 45778899999999999999964 689999999976543 346789999999999999999999999864 456
Q ss_pred EEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCC
Q 003926 555 IFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSY 630 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~Df 630 (786)
.++||||+++|+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 89999999999999988542 1124689999999999999999999997 99999999999999 45678999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|++.............++..|+|||.+. +.++.++||||||+++|||++|+.||.............. ... ..
T Consensus 172 g~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~-~~-- 244 (285)
T 3is5_A 172 GLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY---KEP-NY-- 244 (285)
T ss_dssp CCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCC-CC--
T ss_pred ecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc---CCc-cc--
Confidence 9997655444444556788899999875 5789999999999999999999999987654443322111 100 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
... .... ...+.+++.+||+.||++|||+.||++|+||.
T Consensus 245 --~~~-~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~ 283 (285)
T 3is5_A 245 --AVE-CRPL----TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283 (285)
T ss_dssp --CC---CCC----CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGG
T ss_pred --ccc-cCcC----CHHHHHHHHHHccCChhhCcCHHHHhcCHHhh
Confidence 000 0011 23566788899999999999999999998865
No 90
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-40 Score=356.33 Aligned_cols=258 Identities=23% Similarity=0.358 Sum_probs=204.9
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeee
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFE 544 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~ 544 (786)
+....++|+..+.||+|+||.||+|+.. +++.||||+++..... ..+.|.+|++++++++||||++++++|..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999964 3589999999765332 24679999999999999999999999864
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCC---------------------CCCCCHHHHHHHHHHHHHHhhhhhcCC
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTGI 603 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~ 603 (786)
.+..++||||+++|+|.+++..... ...+++.+++.++.|+++||.|||+.
T Consensus 122 -------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~- 193 (343)
T 1luf_A 122 -------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER- 193 (343)
T ss_dssp -------SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred -------CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3568999999999999999975321 14689999999999999999999997
Q ss_pred CCCccccCCCCCceeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh
Q 003926 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV 680 (786)
Q Consensus 604 ~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt 680 (786)
+|+||||||+||+++.++.+||+|||+++...... ......++..|+|||.+....++.++|||||||++|||+|
T Consensus 194 --~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 271 (343)
T 1luf_A 194 --KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271 (343)
T ss_dssp --TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred --CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHh
Confidence 99999999999999999999999999986543221 1223345677999999888889999999999999999999
Q ss_pred -CCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 681 -GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 681 -G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
|+.||...........+. .. .. +.....++ ..+.+++.+||+.||++||++.||++++.
T Consensus 272 ~g~~p~~~~~~~~~~~~~~----~~--~~-----~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 272 YGLQPYYGMAHEEVIYYVR----DG--NI-----LACPENCP----LELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TTCCTTTTSCHHHHHHHHH----TT--CC-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCcCCCCChHHHHHHHh----CC--Cc-----CCCCCCCC----HHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 999987655443322211 11 00 01111222 35678888999999999999999999986
No 91
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.1e-39 Score=343.62 Aligned_cols=258 Identities=20% Similarity=0.286 Sum_probs=208.3
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.. .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 77 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-------E 77 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-------C
Confidence 467888999999999999999965 6899999999765432 23678899999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---ccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~D 629 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 78 ~~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~D 151 (284)
T 3kk8_A 78 SFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLAD 151 (284)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEee
Confidence 5689999999999999988753 3589999999999999999999997 9999999999999987655 99999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||......++.++||||||+++|||++|+.||...........+.. .. .
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~~----~ 224 (284)
T 3kk8_A 152 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA---GA----Y 224 (284)
T ss_dssp CTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TC----C
T ss_pred ceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHh---cc----c
Confidence 9998766544444445678889999999888899999999999999999999999976654433322211 10 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+. .. .....+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 225 ~~~~~~-~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (284)
T 3kk8_A 225 DYPSPE-WD----TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 268 (284)
T ss_dssp CCCTTT-TT----TSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred cCCchh-hc----ccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence 000111 01 112356688889999999999999999999998764
No 92
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.9e-40 Score=369.35 Aligned_cols=271 Identities=17% Similarity=0.194 Sum_probs=201.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++|||||++++++...... ...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST-TTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc-ccC
Confidence 457888999999999999999854 689999999975422 2346789999999999999999999988642110 123
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+|||||++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 568999999986 57666643 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhccccccc-
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRS- 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~- 710 (786)
++............++..|+|||.+.+..|+.++||||+||++|||++|++||.+.+... +...+.............
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 976654444445677889999999988899999999999999999999999998755332 222222111100000000
Q ss_pred ---------------------ccccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 ---------------------MVDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ---------------------~~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+..... ..........+.+++.+||+.||++|||+.|+++|+||.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~ 360 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence 0000000 000112245678999999999999999999999999976
No 93
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.9e-40 Score=351.81 Aligned_cols=255 Identities=16% Similarity=0.240 Sum_probs=206.8
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+.|+..+.||+|+||.||+|+.. +|+.||||+++..... ..++|.+|++++++++||||+++++++..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 86 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN----- 86 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 45788899999999999999965 6899999999765322 35679999999999999999999998865
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----cc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~~ 625 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 87 --~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~ 158 (321)
T 2a2a_A 87 --RTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158 (321)
T ss_dssp --SSEEEEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCE
T ss_pred --CCEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCE
Confidence 45689999999999999999753 3689999999999999999999997 999999999999999887 79
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||++.............++..|+|||......++.++|||||||++|||++|+.||...........+. ...
T Consensus 159 kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~---~~~- 234 (321)
T 2a2a_A 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT---SVS- 234 (321)
T ss_dssp EECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---TTC-
T ss_pred EEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hcc-
Confidence 9999999876654444444567889999999988889999999999999999999999997654433222111 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...++...... ...+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 235 ----~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~ 277 (321)
T 2a2a_A 235 ----YDFDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (321)
T ss_dssp ----CCCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTS
T ss_pred ----cccChhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence 00111111111 23567888899999999999999999999864
No 94
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.9e-40 Score=353.59 Aligned_cols=256 Identities=19% Similarity=0.275 Sum_probs=202.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|+.+ +|+.||||+++...... .+.+.+|+.+++++ +|||||++++++..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~------- 81 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------- 81 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-------
Confidence 46788899999999999999975 68999999998654332 34588999999987 89999999998864
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 82 ~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG 155 (345)
T 3a8x_A 82 ESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 155 (345)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGG
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecc
Confidence 45789999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-----HHHHHHHHHHHhcc
Q 003926 632 LPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-----LLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-----~~~~~~~~~~~~~~ 705 (786)
+++... .........++..|+|||.+....++.++|||||||++|||++|++||...... .....+........
T Consensus 156 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~ 235 (345)
T 3a8x_A 156 MCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 235 (345)
T ss_dssp GCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC
T ss_pred ccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC
Confidence 987532 222334556888999999998888999999999999999999999999642110 00011111111110
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH------HHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV------EDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~------~evl~~l~~~~ 757 (786)
...+.. ....+.+++.+||+.||++||++ .|+++|+||..
T Consensus 236 --------~~~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 236 --------IRIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp --------CCCCTT----SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred --------CCCCCC----CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 011111 12356678889999999999995 89999999864
No 95
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-39 Score=343.51 Aligned_cols=259 Identities=17% Similarity=0.259 Sum_probs=205.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC------ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH------STRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.|.+|++++++++||||+++++++..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN----- 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-----
Confidence 45778899999999999999976 6999999998754321 35789999999999999999999999865
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC----cc
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL----VA 625 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~~ 625 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+
T Consensus 80 --~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~ 151 (283)
T 3bhy_A 80 --KTDVVLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRI 151 (283)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCE
T ss_pred --CCeEEEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCce
Confidence 45689999999999999999753 3589999999999999999999997 999999999999999877 79
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||++.............++..|+|||......++.++||||||+++|||++|+.||...........+. ...
T Consensus 152 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~- 227 (283)
T 3bhy_A 152 KLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS---AVN- 227 (283)
T ss_dssp EECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---TTC-
T ss_pred EEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhH---hcc-
Confidence 9999999876544333344557788999999988889999999999999999999999997654433222111 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
...++..... ....+.+++.+||+.||++|||+.|+++|+|+....+
T Consensus 228 ----~~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 228 ----YDFDEEYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp ----CCCCHHHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred ----cCCcchhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 0011111111 1235678888999999999999999999999887544
No 96
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5.2e-40 Score=363.20 Aligned_cols=257 Identities=15% Similarity=0.251 Sum_probs=194.1
Q ss_pred cCCCcc-CccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHh-cCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELIS-KLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~-~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|... +.||+|+||+||+|+.. +|+.||||+++. ...+.+|++++. ..+|||||++++++.... ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~---~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY---AGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE---TTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecc---cCCc
Confidence 455554 68999999999999965 689999999863 346788998874 458999999999876421 1235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~Df 630 (786)
..|+|||||++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 6899999999999999998632 24699999999999999999999997 9999999999999998 788999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHH----HHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL----LKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~----~~~~~~~~~~~~~~ 706 (786)
|+++............++..|+|||.+....|+.++|||||||++|||++|++||....... ....+. ...
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~- 283 (400)
T 1nxk_A 209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQ- 283 (400)
T ss_dssp TTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTC-
T ss_pred ccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCc-
Confidence 99976554434445567889999999988899999999999999999999999996543211 111111 000
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+. .......+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 284 --~~~~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 327 (400)
T 1nxk_A 284 --YEFPNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327 (400)
T ss_dssp --CCCCTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred --ccCCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence 0000110 0112235678888999999999999999999999875
No 97
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=368.01 Aligned_cols=267 Identities=15% Similarity=0.178 Sum_probs=209.9
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeee
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCF 543 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~ 543 (786)
+++++....++|+..+.||+|+||+||+|+.+ +|+.||||+++.... ...+.+.+|..++.+++|||||++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555666789999999999999999999975 699999999975321 22345889999999999999999999886
Q ss_pred eccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 544 ECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 544 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
+ .+..|+|||||++|+|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+|||+|.++
T Consensus 132 ~-------~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 132 D-------ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp C-------SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred e-------CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCC
Confidence 5 467899999999999999997532 3689999999999999999999997 999999999999999999
Q ss_pred cccccCCCcccccccccc--cccccccccccCccccc-------cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 624 VAKISSYNLPLLAENAEK--VGHVIPYSGSIDPTNSA-------RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~--~~~~~~~~~~~aPe~~~-------~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
++||+|||+++....... .....++..|+|||.+. ...|+.++|||||||++|||++|++||.........
T Consensus 200 ~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~ 279 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY 279 (412)
T ss_dssp CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999976543322 22356888999999886 356899999999999999999999999776544332
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCC---CCHHHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER---PSVEDVLWNLQFAAQ 758 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R---Pt~~evl~~l~~~~~ 758 (786)
..+....... .-|...... ...+.+++.+||+ +|++| |+++||++|+||...
T Consensus 280 ~~i~~~~~~~-------~~p~~~~~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 280 GKIVHYKEHL-------SLPLVDEGV----PEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp HHHHTHHHHC-------CCC----CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred HHHHhcccCc-------CCCccccCC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 2221110000 001111111 2356678889999 99998 699999999998753
No 98
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7.8e-41 Score=360.18 Aligned_cols=270 Identities=17% Similarity=0.285 Sum_probs=202.8
Q ss_pred cCCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|++ .+++.||||++........+.|.+|++++++++||||+++++++.. ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~ 97 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG-----PG 97 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec-----CC
Confidence 4677889999999999999984 3688999999986654455679999999999999999999998763 22
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred CceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccc
Confidence 456899999999999999997532 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
++........ .....++..|+|||.+....++.++||||||+++|||++|+.|+......................
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH
T ss_pred cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH
Confidence 9875533221 122335566999999988889999999999999999999999986543321111000000000000
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.............+......+.+++.+||+.||++|||+.|++++++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred HHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0000000000001112234567888899999999999999999999633
No 99
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=358.63 Aligned_cols=258 Identities=20% Similarity=0.372 Sum_probs=205.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+++++++ +|||||+++++|..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-
Confidence 456788899999999999999852 2468999999765332 246799999999999 99999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||
T Consensus 147 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl 217 (382)
T 3tt0_A 147 ------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDL 217 (382)
T ss_dssp ------SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ------CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 3568999999999999999976431 23589999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+|||++.++.+||+|||+++...... ......++..|+|||.+....++.++|||||||++|||+| |+.||...
T Consensus 218 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp CGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999987554322 1222344567999999988899999999999999999999 99999876
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+...+.. .. .+.....++ ..+.+++.+||+.||++|||+.||+++++....
T Consensus 298 ~~~~~~~~~~~---~~--------~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 298 PVEELFKLLKE---GH--------RMDKPSNCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp CHHHHHHHHHT---TC--------CCCCCSSCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHc---CC--------CCCCCccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 55443332211 10 011111222 356788889999999999999999999975543
No 100
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.7e-40 Score=355.57 Aligned_cols=265 Identities=15% Similarity=0.138 Sum_probs=202.2
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC-----CCChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK-----CHSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
+....++|...+.||+|+||.||+|+.. ++..||||++.... ....+.|.+|++++++++|||||++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 3455677999999999999999999964 68899999987542 2335679999999999999999999999865
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCC-------------------------------------CCCCCCHHHHHHH
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------------------------------------AHQSLTWTQRISA 588 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i 588 (786)
.+..++|||||++|+|.+++.... ....+++.....+
T Consensus 100 ------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 173 (345)
T 3hko_A 100 ------EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI 173 (345)
T ss_dssp ------SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHH
T ss_pred ------CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHH
Confidence 457899999999999999985210 0112356677889
Q ss_pred HHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC--cccccCCCccccccccc-----ccccccccccccCcccccc--
Q 003926 589 AIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL--VAKISSYNLPLLAENAE-----KVGHVIPYSGSIDPTNSAR-- 659 (786)
Q Consensus 589 a~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~--~~kl~DfGl~~~~~~~~-----~~~~~~~~~~~~aPe~~~~-- 659 (786)
+.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++....... ......++..|+|||.+..
T Consensus 174 ~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 250 (345)
T 3hko_A 174 MRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250 (345)
T ss_dssp HHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred HHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence 99999999999998 999999999999998776 89999999986543211 1234457788999998864
Q ss_pred CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCC
Q 003926 660 GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN 739 (786)
Q Consensus 660 ~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~d 739 (786)
..++.++|||||||++|||++|+.||...........+. ... .....+.. ......+.+++.+||+.|
T Consensus 251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~---~~~----~~~~~~~~-----~~~~~~~~~li~~~l~~~ 318 (345)
T 3hko_A 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVL---NKK----LCFENPNY-----NVLSPLARDLLSNLLNRN 318 (345)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCC----CCTTSGGG-----GGSCHHHHHHHHHHSCSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH---hcc----cccCCccc-----ccCCHHHHHHHHHHcCCC
Confidence 678999999999999999999999997654433222111 110 00111110 111235668888999999
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 003926 740 PAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 740 P~~RPt~~evl~~l~~~~~ 758 (786)
|++|||+.|+++|+|+.+.
T Consensus 319 p~~Rps~~~~l~hp~~~~~ 337 (345)
T 3hko_A 319 VDERFDAMRALQHPWISQF 337 (345)
T ss_dssp TTTSCCHHHHHHSHHHHTT
T ss_pred hhHCCCHHHHhcChhhccC
Confidence 9999999999999998754
No 101
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.7e-39 Score=346.43 Aligned_cols=256 Identities=20% Similarity=0.340 Sum_probs=198.1
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||.||+|+.. ..+|||+++..... ..+.|.+|++++++++||||+++++++.. +
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------~ 104 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--------D 104 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------S
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc--------C
Confidence 356888899999999999999865 36899988764432 24679999999999999999999998642 3
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a 179 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSS
T ss_pred cEEEEEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCc
Confidence 479999999999999999753 24689999999999999999999997 9999999999999999999999999998
Q ss_pred ccccc---ccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhccc
Q 003926 634 LLAEN---AEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADES 706 (786)
Q Consensus 634 ~~~~~---~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~ 706 (786)
..... ........++..|+|||.+. ...++.++|||||||++|||+||+.||...... .....+.. ..
T Consensus 180 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~---~~-- 254 (307)
T 3lb7_A 180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR---GY-- 254 (307)
T ss_dssp CC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH---TC--
T ss_pred eecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc---CC--
Confidence 65432 11223346788899999875 566899999999999999999999999764332 22211111 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... .+.....++ ..+.+++.+||+.||++||++.||+++++..+
T Consensus 255 -~~~~-~~~~~~~~~----~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 255 -ASPD-LSKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp -CCCC-STTSCSSSC----HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred -CCcc-hhhhhcCCc----HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 0000 011112233 35678888999999999999999999998654
No 102
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.2e-40 Score=341.25 Aligned_cols=251 Identities=20% Similarity=0.338 Sum_probs=202.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|+.+++..||||+++... ...+++.+|++++++++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~~~ 78 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-------EYPI 78 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SSSE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CCce
Confidence 35677889999999999999999888899999997654 345789999999999999999999998864 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 153 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRY 153 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEE
T ss_pred EEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCcccee
Confidence 9999999999999999753 23589999999999999999999997 999999999999999999999999999865
Q ss_pred ccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
....... ....++..|+|||......++.++||||||+++|||+| |+.||...........+. ... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~---~~~-----~~~ 225 (268)
T 3sxs_A 154 VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS---QGH-----RLY 225 (268)
T ss_dssp CCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH---TTC-----CCC
T ss_pred cchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH---cCC-----CCC
Confidence 5332211 22233456999999988889999999999999999999 999997654433222111 110 111
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+. ..+ ..+.+++.+||+.||++|||+.|++++++
T Consensus 226 ~~~---~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 226 RPH---LAS----DTIYQIMYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp CCT---TSC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred CCC---cCh----HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 111 34667888999999999999999999986
No 103
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.3e-40 Score=370.93 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=199.7
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..++|...+.||+|+||.||+|+.+++..||||+++... ...++|.+|+++|++++|||||+++|++.+ +.
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--------~~ 252 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EP 252 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--------Cc
Confidence 456678889999999999999999888889999998654 346789999999999999999999998753 34
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++|||||++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 253 ~~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 328 (452)
T 1fmk_A 253 IYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 328 (452)
T ss_dssp CEEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred eEEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccce
Confidence 799999999999999997421 23589999999999999999999997 99999999999999999999999999997
Q ss_pred ccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
....... .....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......+...+.. . .+
T Consensus 329 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~----~---~~-- 399 (452)
T 1fmk_A 329 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER----G---YR-- 399 (452)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----T---CC--
T ss_pred ecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C---CC--
Confidence 6543221 122234567999999988899999999999999999999 9999976554333222211 0 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
...+..+ ...+.+++.+||+.||++|||+.+|++.+.
T Consensus 400 --~~~~~~~----~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 400 --MPCPPEC----PESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp --CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0111122 235678888999999999999999998885
No 104
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=349.37 Aligned_cols=268 Identities=18% Similarity=0.276 Sum_probs=201.7
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+.. +|+.||||++....... .+.+.+|++++++++||||+++++++.. .+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~ 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-------KR 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TT
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-------CC
Confidence 56888899999999999999975 59999999987554322 4568899999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 149 (311)
T 4agu_A 76 RLHLVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFA 149 (311)
T ss_dssp EEEEEEECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCc
Confidence 689999999999999988753 3589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc------
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE------ 705 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~------ 705 (786)
...... .......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+........
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (311)
T 4agu_A 150 RLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229 (311)
T ss_dssp EECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred hhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccc
Confidence 655422 22234456778999998865 5689999999999999999999999976554333222222111100
Q ss_pred ----cc--cccccccccccc---CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 ----SA--RRSMVDPAVNKA---CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ----~~--~~~~~d~~~~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. .....++..... ........+.+++.+||+.||++|||++|+++|+||..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 290 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence 00 001111110000 00112345778899999999999999999999998765
No 105
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.3e-39 Score=355.93 Aligned_cols=282 Identities=18% Similarity=0.251 Sum_probs=208.0
Q ss_pred HHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC-----------hHHHHHHHHHHhcCCCCCcce
Q 003926 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS-----------TRNFMHHIELISKLRHRHLVS 537 (786)
Q Consensus 469 ~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~NIv~ 537 (786)
.+++....++|...+.||+|+||.||+|+..+|..||||++....... .+.|.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 567888899999999999999999999998889999999997543221 267999999999999999999
Q ss_pred eeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCce
Q 003926 538 ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDI 617 (786)
Q Consensus 538 l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NI 617 (786)
+++++.... .......++||||++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||
T Consensus 94 ~~~~~~~~~--~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 94 LRDIFVHFE--EPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CSEEEEECC--TTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred eeeeEEecc--CCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999986521 223457899999998 6999988753 34689999999999999999999998 999999999999
Q ss_pred eecCCCcccccCCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHH
Q 003926 618 LLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQ 696 (786)
Q Consensus 618 Lld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~ 696 (786)
+++.++.+||+|||++.............++..|+|||.+.. ..++.++|||||||++|||++|++||...........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp EECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999999975544433444567778999998766 6789999999999999999999999976544332222
Q ss_pred HHHHHHhcc-cc------------cccccc---ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 697 LQAVVTADE-SA------------RRSMVD---PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 697 ~~~~~~~~~-~~------------~~~~~d---~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+........ .. ...... ..............+.+++.+||+.||++|||+.|+++|+||...
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence 211111000 00 000000 000000011123457788999999999999999999999998753
No 106
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.4e-39 Score=355.31 Aligned_cols=284 Identities=17% Similarity=0.193 Sum_probs=199.6
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.+.....++|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++|||||++++++......
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345667789999999999999999999964 68999999986543 3345678889999999999999999998763322
Q ss_pred CCCCceEEEEEecCCCCChhHHhhc-CCCCCCCCHHHHHHHHHHHHHHhhhhh--cCCCCCccccCCCCCceeecC-CCc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISE-GHAHQSLTWTQRISAAIGVAKGIQFLH--TGIVPGVFSNNLKITDILLDQ-NLV 624 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~ia~~ia~gL~yLH--~~~~~~ivHrdlk~~NILld~-~~~ 624 (786)
+......++||||+++ +|.+.+.. ......+++.....++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 2233457899999986 55444332 112346889999999999999999999 65 9999999999999997 899
Q ss_pred ccccCCCcccccccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
+||+|||+++............++..|+|||.+... .++.++|||||||++|||+||++||...........+......
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 250 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250 (360)
T ss_dssp EEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC
Confidence 999999999766544444455678889999987554 4899999999999999999999999875543332222211111
Q ss_pred cccccccccccc----------------ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 704 DESARRSMVDPA----------------VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 704 ~~~~~~~~~d~~----------------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.........++. ............+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence 000000000000 0000011134567889999999999999999999999998754
No 107
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.2e-40 Score=353.75 Aligned_cols=274 Identities=15% Similarity=0.284 Sum_probs=192.7
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEecC-C---cEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLKN-G---TFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~~-g---~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
....++|+..+.||+|+||.||+|+... + ..||||+++.... ...+.|.+|++++++++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3445678999999999999999999653 3 2899999976532 23577999999999999999999999987522
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCC---CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGH---AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
.. ......++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 99 ~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 99 AK-GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred cc-cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 11 01123489999999999999986421 123589999999999999999999998 999999999999999999
Q ss_pred cccccCCCccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHH
Q 003926 624 VAKISSYNLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 699 (786)
.+||+|||+++........ ....++..|+|||.+....++.++|||||||++|||++ |++||...........+..
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~ 254 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc
Confidence 9999999998655332211 12234557999999988889999999999999999999 8999976554433222211
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhhccCC
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQS 767 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~~~~~ 767 (786)
.. . +.....+ ...+.+++.+||+.||++|||+.|+++.++.. ..+.|....
T Consensus 255 ---~~----~----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~--l~~~~~~~~ 305 (323)
T 3qup_A 255 ---GN----R----LKQPPEC----MEEVYDLMYQCWSADPKQRPSFTCLRMELENI--LGHLSVLST 305 (323)
T ss_dssp ---TC----C----CCCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH--HHC------
T ss_pred ---CC----C----CCCCCcc----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH--HHHhhhcCC
Confidence 00 0 0111112 23567888999999999999999999888743 344454443
No 108
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.9e-39 Score=343.88 Aligned_cols=254 Identities=21% Similarity=0.328 Sum_probs=197.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +++.||||++....... .+.|.+|+.++++++||||+++++++.. .
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-------~ 83 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-------D 83 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-------S
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-------C
Confidence 46788899999999999999954 68999999986544322 3578999999999999999999998864 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 157 (294)
T 4eqm_A 84 DCYYLVMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGI 157 (294)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSS
T ss_pred CeEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCC
Confidence 5789999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred cccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 633 PLLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 633 ~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++...... ......++..|+|||......++.++|||||||++|||+||++||.......... ...... ...
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~---~~~~~~---~~~ 231 (294)
T 4eqm_A 158 AKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI---KHIQDS---VPN 231 (294)
T ss_dssp STTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH---HHHSSC---CCC
T ss_pred ccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHhhcc---CCC
Confidence 86553322 1223457889999999988889999999999999999999999998654332211 111110 000
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQ 754 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~l~ 754 (786)
..+.... .....+.+++.+||++||++|| +++++.+.+.
T Consensus 232 -~~~~~~~----~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 232 -VTTDVRK----DIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp -HHHHSCT----TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred -cchhccc----CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 0011111 1224567788899999999999 7777776664
No 109
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3e-40 Score=360.56 Aligned_cols=274 Identities=19% Similarity=0.239 Sum_probs=208.8
Q ss_pred cCHHHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-----CCCcceeee
Q 003926 467 FSLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----HRHLVSALG 540 (786)
Q Consensus 467 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H~NIv~l~g 540 (786)
+++++.....++|...+.||+|+||+||+|+. .+++.||||+++... ...+.+..|++++++++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 44444445567899999999999999999996 468999999987432 23456888999999986 999999999
Q ss_pred eeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 541 ~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
++.. .+..++||||+ +|+|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+|||++
T Consensus 104 ~~~~-------~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 171 (360)
T 3llt_A 104 KFMY-------YDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLD 171 (360)
T ss_dssp EEEE-------TTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred eeeE-------CCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEc
Confidence 9875 45689999999 899999998643 23589999999999999999999997 999999999999998
Q ss_pred C-------------------------CCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHH
Q 003926 621 Q-------------------------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLIL 675 (786)
Q Consensus 621 ~-------------------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl 675 (786)
. ++.+||+|||+++..... .....++..|+|||.+....++.++|||||||++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred cccccccccchhcccccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 6 788999999998754332 2344577889999999888999999999999999
Q ss_pred HHHHhCCCCCCCchhHHHHHHHHHHHHhcccc---------ccccccc-----cccccC-cH---------------HHH
Q 003926 676 LEIIVGRPLKSRKEVDLLKNQLQAVVTADESA---------RRSMVDP-----AVNKAC-LD---------------ESL 725 (786)
Q Consensus 676 ~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~-----~~~~~~-~~---------------~~~ 725 (786)
|||+||++||...........+.......... ....++. ..+... .. ...
T Consensus 250 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (360)
T 3llt_A 250 AELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329 (360)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence 99999999997655443333322221110000 0000000 000000 00 001
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 726 KTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 726 ~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+.+++.+||+.||++|||+.|+++|+||
T Consensus 330 ~~l~~li~~~L~~dP~~Rpta~elL~hp~f 359 (360)
T 3llt_A 330 ELFCDFLYSILQIDPTLRPSPAELLKHKFL 359 (360)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhcCccc
Confidence 456789999999999999999999999875
No 110
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.1e-39 Score=348.69 Aligned_cols=262 Identities=17% Similarity=0.288 Sum_probs=200.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+. .+++.||||+++...... ...|.+|++++++++|||||++++++.... ..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---~~ 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET---PA 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE---TT
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC---CC
Confidence 35688889999999999999995 579999999998654333 356899999999999999999999886521 11
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred CcccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 23459999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc----ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 632 LPLLAENAE----KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 632 l~~~~~~~~----~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+++...... ......++..|+|||.+....++.++|||||||++|||+||+.||............ .....
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~---~~~~~-- 236 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH---VREDP-- 236 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHCCC--
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---hcCCC--
Confidence 986543221 122345688999999998889999999999999999999999999765543322111 11100
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
........ .....+.+++.+||+.||++||++.+++.+.++...
T Consensus 237 ---~~~~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 237 ---IPPSARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp ---CCHHHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ---CCcccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 00000011 112356688889999999999999999998887653
No 111
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=355.29 Aligned_cols=253 Identities=16% Similarity=0.296 Sum_probs=195.1
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCC--CCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRH--RHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H--~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|+..+.||+|+||.||+|..++++.||||++...... ..+.|.+|++++++++| +||+++++++.. .
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-------~ 81 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-------D 81 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------S
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-------C
Confidence 457888999999999999999888999999998755432 23678999999999987 999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||| +.+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~ 153 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGI 153 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred CEEEEEEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccc
Confidence 57899999 5678999999863 3689999999999999999999997 999999999999997 56799999999
Q ss_pred ccccccccc---cccccccccccCcccccc-----------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 633 PLLAENAEK---VGHVIPYSGSIDPTNSAR-----------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 633 ~~~~~~~~~---~~~~~~~~~~~aPe~~~~-----------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
++....... .....++..|+|||.+.. ..++.++|||||||++|||++|++||....... . .+.
T Consensus 154 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~-~~~ 231 (343)
T 3dbq_A 154 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-S-KLH 231 (343)
T ss_dssp SCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-H-HHH
T ss_pred ccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-H-HHH
Confidence 975533221 223467889999998754 678999999999999999999999997532211 1 111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... . ....+... ...+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 232 ~~~~~~---~----~~~~~~~~----~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 232 AIIDPN---H----EIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp HHHCTT---S----CCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred HHhcCC---c----ccCCcccC----CHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 111100 0 00111111 134668888999999999999999999999874
No 112
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=355.88 Aligned_cols=247 Identities=13% Similarity=0.212 Sum_probs=203.6
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--------ChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--------STRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--------~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-- 100 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-- 100 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC--
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee--
Confidence 46788899999999999999985 46899999999765321 23467889999999999999999999865
Q ss_pred ccCCCCceEEEEEecCCCC-ChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 547 FDDSSVSRIFLIFEYVPNG-TLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
.+..++||||+.+| +|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+
T Consensus 101 -----~~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 169 (335)
T 3dls_A 101 -----QGFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTI 169 (335)
T ss_dssp -----SSEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCE
T ss_pred -----CCEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcE
Confidence 45789999999877 999999763 3589999999999999999999998 99999999999999999999
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||+|||++.............++..|+|||.+....+ +.++|||||||++|||++|+.||......
T Consensus 170 kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------- 236 (335)
T 3dls_A 170 KLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------- 236 (335)
T ss_dssp EECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------
T ss_pred EEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------
Confidence 9999999976655444445567889999999887776 78999999999999999999999653210
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
......+ +... ...+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 237 ---~~~~~~~--~~~~----~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~ 280 (335)
T 3dls_A 237 ---VEAAIHP--PYLV----SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280 (335)
T ss_dssp ---TTTCCCC--SSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred ---HhhccCC--Cccc----CHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence 0000000 0111 234668888999999999999999999999865
No 113
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3e-39 Score=367.66 Aligned_cols=259 Identities=18% Similarity=0.266 Sum_probs=205.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|+..+.||+|+||+||+|+.+ ++..||||++.... ......+.+|++++++++|||||+++++|.. .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 108 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-------K 108 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-------C
Confidence 345888999999999999999965 68999999997653 2345789999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---CcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~D 629 (786)
...|+|||||++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++.. +.+||+|
T Consensus 109 ~~~~lv~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 109 RNYYLVMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred CEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEE
Confidence 5689999999999999988753 3589999999999999999999997 99999999999999764 4599999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||.+. +.|+.++||||+||++|||++|++||.......+...+... . .
T Consensus 183 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~---~----~ 254 (494)
T 3lij_A 183 FGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG---K----Y 254 (494)
T ss_dssp CTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT---C----C
T ss_pred CCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---C----C
Confidence 99997665544445567888999999875 57999999999999999999999999876554433322211 0 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
....+. .. .....+.+++.+||+.||.+|||+.|+++|+|+.+...
T Consensus 255 ~~~~~~-~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~ 300 (494)
T 3lij_A 255 TFDSPE-WK----NVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300 (494)
T ss_dssp CCCSGG-GT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHH
T ss_pred CCCchh-cc----cCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcc
Confidence 000111 11 11235668888999999999999999999999987543
No 114
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=354.13 Aligned_cols=269 Identities=16% Similarity=0.270 Sum_probs=199.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC-hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS-TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~-~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||+||+|+.. +++.||||+++...... ...+.+|++++++++|||||++++++.. .+.
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 74 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-------EKS 74 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-------SSC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-------CCE
Confidence 46788899999999999999965 78999999997544222 2346689999999999999999999865 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||++ |+|.+++.... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 75 LTLVFEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp EEEEEECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred EEEEecccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccc
Confidence 899999998 59999987642 3589999999999999999999997 99999999999999999999999999986
Q ss_pred ccccc-cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh-cccccccc
Q 003926 635 LAENA-EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA-DESARRSM 711 (786)
Q Consensus 635 ~~~~~-~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 711 (786)
..... .......++..|+|||.+.. ..++.++|||||||++|||++|++||...........+...... ....+...
T Consensus 149 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 149 AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 228 (324)
T ss_dssp CC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred cccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhh
Confidence 54322 22233456788999998765 56899999999999999999999999876554433333222211 11111111
Q ss_pred ccc---------cccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 VDP---------AVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~d~---------~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+. .... .........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 288 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence 100 0000 0001122456788899999999999999999999998754
No 115
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.6e-39 Score=339.36 Aligned_cols=254 Identities=18% Similarity=0.299 Sum_probs=199.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 83 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-------P 83 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-------C
Confidence 56788899999999999999975 79999999987542 2345689999999999999999999998865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~ 157 (276)
T 2h6d_A 84 TDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGL 157 (276)
T ss_dssp SEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCG
T ss_pred CeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccc
Confidence 5689999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+.............++..|+|||......+ +.++||||||+++|||++|+.||...........+.. .. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~---~-- 228 (276)
T 2h6d_A 158 SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG----GV---F-- 228 (276)
T ss_dssp GGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----CC---C--
T ss_pred ccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc----Cc---c--
Confidence 876544333334456778999999877655 6899999999999999999999976554433222211 10 0
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
..+... ...+.+++.+||+.||++|||+.|+++|+|+.+..
T Consensus 229 ---~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 229 ---YIPEYL----NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp ---CCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred ---cCchhc----CHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 011111 23466788899999999999999999999987543
No 116
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.3e-39 Score=353.33 Aligned_cols=251 Identities=18% Similarity=0.320 Sum_probs=199.8
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|+..+.||+|+||.||+|+. .+|+.||||++...... ..+.|.+|++++++++|||||++++++.. .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 126 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------E 126 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------C
Confidence 4477889999999999999995 57999999999754332 23578999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 127 ~~~~lv~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 200 (348)
T 1u5q_A 127 HTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGS 200 (348)
T ss_dssp TEEEEEEECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTT
T ss_pred CeEEEEEecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccC
Confidence 57899999998 6888888642 24689999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
+...... ....++..|+|||.+. .+.++.++|||||||++|||++|++||.......... ...... ..
T Consensus 201 a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~---~~~~~~---~~ 271 (348)
T 1u5q_A 201 ASIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIAQNE---SP 271 (348)
T ss_dssp CBSSSSB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHHHSC---CC
T ss_pred ceecCCC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHhcC---CC
Confidence 8655432 2345778899999874 5678999999999999999999999987644322111 111111 01
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ...++ ..+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 272 ~~~----~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 272 ALQ----SGHWS----EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp CCC----CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred CCC----CCCCC----HHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 110 11122 34567888999999999999999999999754
No 117
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.4e-39 Score=355.64 Aligned_cols=253 Identities=16% Similarity=0.268 Sum_probs=197.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---CChHHHHHHHHH-HhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---HSTRNFMHHIEL-ISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~-l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||+||+|+.+ +++.||||+++.... ...+.+.+|..+ ++.++|||||++++++..
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~------ 110 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT------ 110 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC------
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe------
Confidence 357888999999999999999975 589999999976542 223557778776 577899999999998865
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..|+||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 111 -~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DF 183 (373)
T 2r5t_A 111 -ADKLYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDF 183 (373)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeC
Confidence 45789999999999999999753 3588899999999999999999997 9999999999999999999999999
Q ss_pred Ccccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 631 NLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 631 Gl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
|+++... .........++..|+|||.+....|+.++|||||||++|||++|++||...+.......+. ...
T Consensus 184 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~~~----- 255 (373)
T 2r5t_A 184 GLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL---NKP----- 255 (373)
T ss_dssp CBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHH---HSC-----
T ss_pred ccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---hcc-----
Confidence 9987532 2233345678889999999988889999999999999999999999997765443322221 111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH----HHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV----EDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~----~evl~~l~~~~ 757 (786)
........ ..+.+++.+||+.||++||++ .|+.+|.||..
T Consensus 256 ----~~~~~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 256 ----LQLKPNIT----NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp ----CCCCSSSC----HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred ----cCCCCCCC----HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence 00111111 346678889999999999997 68888988764
No 118
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.9e-39 Score=339.34 Aligned_cols=251 Identities=19% Similarity=0.359 Sum_probs=191.2
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC----CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC----HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. |..||||+++.... ...+.+.+|++++++++||||+++++++.. .
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 78 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-------E 78 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-------C
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-------C
Confidence 56778899999999999999975 88999999875432 234679999999999999999999999865 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC--------CCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--------NLV 624 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--------~~~ 624 (786)
+..++||||+++|+|.+++.. ..+++.....++.|+++||.|||+....+|+||||||+||+++. ++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~ 154 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred CceEEEEEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcc
Confidence 468999999999999999964 36899999999999999999999973233999999999999986 678
Q ss_pred ccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
+||+|||++........ ....++..|+|||......++.++||||||+++|||++|+.||............. ..
T Consensus 155 ~kl~Dfg~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~- 229 (271)
T 3dtc_A 155 LKITDFGLAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA---MN- 229 (271)
T ss_dssp EEECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH---TS-
T ss_pred eEEccCCcccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh---cC-
Confidence 99999999865543222 23456788999999988889999999999999999999999997654332221111 00
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. ........++ ..+.+++.+||+.||++|||+.|+++++.
T Consensus 230 --~----~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 230 --K----LALPIPSTCP----EPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp --C----CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --C----CCCCCCcccC----HHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 0 0111111222 35678888999999999999999999985
No 119
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.6e-39 Score=367.49 Aligned_cols=257 Identities=18% Similarity=0.268 Sum_probs=209.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.. .
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 98 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-------K 98 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-------C
Confidence 45788899999999999999965 79999999996543 2346789999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~D 629 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 172 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIID 172 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEe
Confidence 5789999999999999999753 3589999999999999999999998 99999999999999 5678899999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||.+.. .|+.++||||+||++|||++|++||...........+.. .. .
T Consensus 173 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~---~- 244 (484)
T 3nyv_A 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK---GK---Y- 244 (484)
T ss_dssp TTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC---C-
T ss_pred eeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CC---C-
Confidence 999976655444445568889999998754 799999999999999999999999987655443332221 10 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
....+. .......+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 245 ~~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~ 289 (484)
T 3nyv_A 245 TFELPQ-----WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 289 (484)
T ss_dssp CCCSGG-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred CCCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence 000011 111223567888899999999999999999999987643
No 120
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.5e-39 Score=367.87 Aligned_cols=259 Identities=18% Similarity=0.258 Sum_probs=207.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|++++++++|||||++++++.. .
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-------~ 257 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-------K 257 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-------C
Confidence 67888899999999999999975 69999999997542 2345779999999999999999999998764 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCC-CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHA-HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..|+||||+++|+|.+++..... ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFG 334 (543)
T 3c4z_A 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334 (543)
T ss_dssp SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecc
Confidence 568999999999999999975422 34689999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhcccccc
Q 003926 632 LPLLAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESARR 709 (786)
Q Consensus 632 l~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 709 (786)
+++....... .....++..|+|||.+....|+.++|||||||++|||+||++||...... .............
T Consensus 335 la~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~----- 409 (543)
T 3c4z_A 335 LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA----- 409 (543)
T ss_dssp TCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC-----
T ss_pred eeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc-----
Confidence 9976543322 23347889999999998888999999999999999999999999754211 1111111111111
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV-----EDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~~~~~ 758 (786)
...+. .....+.+++.+||+.||++||++ .||++|+||...
T Consensus 410 ----~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 410 ----VTYPD----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp ----CCCCT----TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred ----cCCCc----ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 00111 112356678889999999999964 899999998753
No 121
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-39 Score=358.18 Aligned_cols=278 Identities=16% Similarity=0.212 Sum_probs=203.2
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc---
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD--- 548 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~--- 548 (786)
+...++|...+.||+|+||+||+|+. .+|+.||||++..... .+.+|++++++++|||||++++++......
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999985 5799999999865432 234799999999999999999998642210
Q ss_pred ----------------------------CCCCceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhh
Q 003926 549 ----------------------------DSSVSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFL 599 (786)
Q Consensus 549 ----------------------------~~~~~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yL 599 (786)
.......++||||++ |+|.+.+... .....+++.....++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 022345889999998 5888777531 1234689999999999999999999
Q ss_pred hcCCCCCccccCCCCCceeec-CCCcccccCCCcccccccccccccccccccccCccccccC-CCCcccceeehhHHHHH
Q 003926 600 HTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLE 677 (786)
Q Consensus 600 H~~~~~~ivHrdlk~~NILld-~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~E 677 (786)
|+. +|+||||||+||+++ .++.+||+|||+++............++..|+|||.+.+. .++.++||||+||++||
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 997 999999999999998 6889999999999766544444455677889999987654 48999999999999999
Q ss_pred HHhCCCCCCCchh-HHHHHHHHHHHHhcccc-------ccccccccccc-----cCcHHHHHHHHHHHHHhccCCCCCCC
Q 003926 678 IIVGRPLKSRKEV-DLLKNQLQAVVTADESA-------RRSMVDPAVNK-----ACLDESLKTMMEVCVRCLLKNPAERP 744 (786)
Q Consensus 678 lltG~~p~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~d~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RP 744 (786)
|++|++||..... +.+...+.......... .....-+.... ..+......+.+++.+||+.||++||
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999999986543 33333322211110000 00000011000 01111234577889999999999999
Q ss_pred CHHHHHHHHHHHHH
Q 003926 745 SVEDVLWNLQFAAQ 758 (786)
Q Consensus 745 t~~evl~~l~~~~~ 758 (786)
|+.|+++|+||...
T Consensus 315 t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 315 NPYEAMAHPFFDHL 328 (383)
T ss_dssp CHHHHHTSGGGHHH
T ss_pred CHHHHhcCHHHHHH
Confidence 99999999998764
No 122
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1e-38 Score=336.81 Aligned_cols=250 Identities=21% Similarity=0.415 Sum_probs=196.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC-------hHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS-------TRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~-------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
++|+..+.||+|+||.||+|+. .+++.||||++....... .+.|.+|++++++++||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 94 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---- 94 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT----
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC----
Confidence 5678889999999999999996 478999999987544322 1679999999999999999999998753
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC--ccccCCCCCceeecCCCc--
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLV-- 624 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~--ivHrdlk~~NILld~~~~-- 624 (786)
..++||||+++|+|.+++.+. ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 95 -----~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~ 164 (287)
T 4f0f_A 95 -----PPRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENA 164 (287)
T ss_dssp -----TTEEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTC
T ss_pred -----CCeEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCC
Confidence 237999999999999998753 24699999999999999999999997 6 999999999999988776
Q ss_pred ---ccccCCCcccccccccccccccccccccCcccc--ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 625 ---AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS--ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 625 ---~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~--~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
+||+|||+++.... ......++..|+|||.+ ....++.++|||||||++|||++|+.||........... ..
T Consensus 165 ~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~ 241 (287)
T 4f0f_A 165 PVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-NM 241 (287)
T ss_dssp SCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH-HH
T ss_pred ceeEEeCCCCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH-HH
Confidence 99999999864432 22334577889999987 345578999999999999999999999976443222111 11
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..... ..+.....++ ..+.+++.+||+.||++|||+.||++.+.
T Consensus 242 ~~~~~-------~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 242 IREEG-------LRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp HHHSC-------CCCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhccC-------CCCCCCcccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11110 1111222222 35678888999999999999999999885
No 123
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2e-39 Score=360.96 Aligned_cols=257 Identities=19% Similarity=0.287 Sum_probs=195.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--------CChHHHHHHHHHHhcCCCCCcceeeeeeeec
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLRHRHLVSALGHCFEC 545 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~ 545 (786)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....|.+|++++++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4578999999999999999999864 689999999875431 112358899999999999999999998742
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN--- 622 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~--- 622 (786)
+..++|||||++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.+
T Consensus 212 -------~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~ 278 (419)
T 3i6u_A 212 -------EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEED 278 (419)
T ss_dssp -------SEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSS
T ss_pred -------CceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCc
Confidence 4579999999999999998753 3689999999999999999999997 99999999999999754
Q ss_pred CcccccCCCcccccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHH
Q 003926 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQ 698 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~ 698 (786)
..+||+|||+++............++..|+|||.+. ...|+.++|||||||++|||+||++||..... ..+...+.
T Consensus 279 ~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~ 358 (419)
T 3i6u_A 279 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 358 (419)
T ss_dssp CCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHH
T ss_pred ceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHh
Confidence 459999999997765444444566788999999875 35688999999999999999999999975322 12222111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .. .. ..+.... .....+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 359 ~----~~---~~-~~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 359 S----GK---YN-FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp T----TC---CC-CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred c----CC---CC-CCchhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 1 00 00 0111111 12235678889999999999999999999999754
No 124
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.8e-39 Score=352.19 Aligned_cols=261 Identities=19% Similarity=0.344 Sum_probs=207.1
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--------hHHHHHHHHHHhcC-CCCCcceeee
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--------TRNFMHHIELISKL-RHRHLVSALG 540 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--------~~~f~~E~~~l~~l-~H~NIv~l~g 540 (786)
......++|+..+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+++++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33445567999999999999999999975 79999999987543211 34688999999999 7999999999
Q ss_pred eeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 541 HCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 541 ~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
++.. .+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++
T Consensus 168 ~~~~-------~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 168 SYES-------SSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD 234 (365)
T ss_dssp EEEB-------SSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred EEee-------CCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 8865 45789999999999999999753 3589999999999999999999997 999999999999999
Q ss_pred CCCcccccCCCcccccccccccccccccccccCcccccc------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 621 QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 621 ~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
.++.+||+|||++.............++..|+|||.+.. ..++.++|||||||++|||++|++||.........
T Consensus 235 ~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 314 (365)
T 2y7j_A 235 DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML 314 (365)
T ss_dssp TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred CCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 999999999999876654444455667889999998753 35889999999999999999999999765433322
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..+.. .. .....+.. .. ....+.+++.+||+.||++|||+.|+++|+||.
T Consensus 315 ~~i~~---~~----~~~~~~~~-~~----~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 315 RMIME---GQ----YQFSSPEW-DD----RSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHHHH---TC----CCCCHHHH-SS----SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred HHHHh---CC----CCCCCccc-cc----CCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 22111 00 00000100 11 123567888899999999999999999999863
No 125
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=9.2e-40 Score=352.07 Aligned_cols=269 Identities=19% Similarity=0.286 Sum_probs=196.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..++|...+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 104 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH------- 104 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-------
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-------
Confidence 456788999999999999999985 47999999999755432 24568899999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee-----cCCCccc
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL-----DQNLVAK 626 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl-----d~~~~~k 626 (786)
.+..++||||++ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+|
T Consensus 105 ~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~k 177 (329)
T 3gbz_A 105 NHRLHLIFEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLK 177 (329)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEE
T ss_pred CCEEEEEEecCC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEE
Confidence 457899999998 5999999763 3589999999999999999999997 99999999999999 5556699
Q ss_pred ccCCCcccccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHh
Q 003926 627 ISSYNLPLLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTA 703 (786)
Q Consensus 627 l~DfGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~ 703 (786)
|+|||+++..... .......++..|+|||.+... .++.++|||||||++|||++|++||....... +..........
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 257 (329)
T 3gbz_A 178 IGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLP 257 (329)
T ss_dssp ECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred ECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 9999998655322 222334567889999998764 48999999999999999999999997654433 22222211111
Q ss_pred ccccccccc--------cccccccCcH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 704 DESARRSMV--------DPAVNKACLD-----ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 704 ~~~~~~~~~--------d~~~~~~~~~-----~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+.... .+........ .....+.+++.+||+.||++|||+.|+++|+||..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 324 (329)
T 3gbz_A 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH 324 (329)
T ss_dssp CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence 100000000 0000000001 12245678889999999999999999999998753
No 126
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.5e-39 Score=364.86 Aligned_cols=257 Identities=18% Similarity=0.264 Sum_probs=205.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC--CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK--CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++|||||++++++.. .
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------~ 93 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-------S 93 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------S
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-------C
Confidence 345888999999999999999965 79999999986542 3446789999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec---CCCcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---QNLVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl~D 629 (786)
...++|||||++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+|||++ .++.+||+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 167 (486)
T 3mwu_A 94 SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIID 167 (486)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECS
T ss_pred CEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEE
Confidence 5789999999999999988753 3589999999999999999999998 999999999999995 456799999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||+++............++..|+|||.+.. .|+.++||||+||++|||++|++||...........+.. ...
T Consensus 168 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~---- 239 (486)
T 3mwu_A 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET---GKY---- 239 (486)
T ss_dssp CSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCC----
T ss_pred CCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCC----
Confidence 999976654444445568889999998764 699999999999999999999999977654433322221 100
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+. .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 240 ~~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 240 AFDLPQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp CSCSGG-----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred CCCCcc-----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 000011 11122356688889999999999999999999998753
No 127
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=8.2e-40 Score=353.78 Aligned_cols=256 Identities=16% Similarity=0.225 Sum_probs=199.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++.... .+.+|++++.++ +|||||++++++.+ .+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~-------~~ 89 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDD-------GK 89 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEEC-------SS
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEc-------CC
Confidence 456888999999999999999965 689999999976543 245788888887 79999999998864 46
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC----CcccccC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN----LVAKISS 629 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~----~~~kl~D 629 (786)
..|+|||||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+..+ +.+||+|
T Consensus 90 ~~~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~D 163 (342)
T 2qr7_A 90 YVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICD 163 (342)
T ss_dssp EEEEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECC
T ss_pred EEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEE
Confidence 789999999999999999763 3589999999999999999999998 99999999999998433 3599999
Q ss_pred CCcccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 630 YNLPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 630 fGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
||+++..... .......++..|+|||.+....|+.++|||||||++|||++|++||.....+..............
T Consensus 164 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~--- 240 (342)
T 2qr7_A 164 FGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF--- 240 (342)
T ss_dssp CTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC---
T ss_pred CCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc---
Confidence 9998755332 223345678899999998877789999999999999999999999975332222222222211110
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .... ........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 241 -~-~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 241 -S-LSGG----YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp -C-CCST----TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred -c-cCcc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 0 0000 11112235668888999999999999999999999853
No 128
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.2e-39 Score=342.87 Aligned_cols=255 Identities=18% Similarity=0.323 Sum_probs=203.1
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
++|...+.||+|+||.||+|+.. +|+.||||+++.......+.+.+|++++++++||||+++++++.. .+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~ 81 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-------TTHY 81 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-------SSEE
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-------CCEE
Confidence 45778899999999999999965 799999999986554445679999999999999999999998865 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCCCc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYNL 632 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DfGl 632 (786)
++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 82 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~ 155 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGL 155 (304)
T ss_dssp EEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCST
T ss_pred EEEEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCc
Confidence 9999999999999998753 3589999999999999999999997 99999999999999 7889999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+...... ......++..|+|||......++.++|||||||++|||++|++||...........+.. .. ...
T Consensus 156 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~---~~----~~~- 226 (304)
T 2jam_A 156 SKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE---GY----YEF- 226 (304)
T ss_dssp TCCCCCB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---CC----CCC-
T ss_pred ceecCCC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CC----CCC-
Confidence 8654332 22234567889999999888899999999999999999999999976544333222211 10 000
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..... ......+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 227 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 227 ESPFW----DDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp CTTTT----TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred Ccccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 11111 112235678888999999999999999999999864
No 129
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2e-39 Score=347.33 Aligned_cols=259 Identities=16% Similarity=0.247 Sum_probs=195.9
Q ss_pred cCCCc-cCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDT-SAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~-~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
+.|.. .+.||+|+||.||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++.. .+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-------~~ 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-------ED 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-------CC
Confidence 34666 37899999999999995 47999999999876555678899999999985 79999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---ccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~Df 630 (786)
..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Df 158 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDF 158 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCT
T ss_pred EEEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEc
Confidence 789999999999999999763 3589999999999999999999998 9999999999999998776 899999
Q ss_pred Cccccccccc--------ccccccccccccCcccccc-----CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-----
Q 003926 631 NLPLLAENAE--------KVGHVIPYSGSIDPTNSAR-----GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL----- 692 (786)
Q Consensus 631 Gl~~~~~~~~--------~~~~~~~~~~~~aPe~~~~-----~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~----- 692 (786)
|++....... ......++..|+|||.+.. ..++.++|||||||++|||++|++||.......
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~ 238 (316)
T 2ac3_A 159 DLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238 (316)
T ss_dssp TCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC--
T ss_pred cCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc
Confidence 9986442111 1122347788999998764 458899999999999999999999986532110
Q ss_pred -------HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 693 -------LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 693 -------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........ .... ....++ ... .....+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 239 ~~~~~~~~~~~~~~i-~~~~---~~~~~~-~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 301 (316)
T 2ac3_A 239 GEACPACQNMLFESI-QEGK---YEFPDK-DWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301 (316)
T ss_dssp --CCHHHHHHHHHHH-HHCC---CCCCHH-HHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-
T ss_pred cccchhHHHHHHHHH-hccC---cccCch-hcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcC
Confidence 00011111 1100 000000 000 11235678889999999999999999999998654
No 130
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.5e-39 Score=358.50 Aligned_cols=253 Identities=16% Similarity=0.294 Sum_probs=195.9
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCC--CCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLR--HRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..|+..+.||+|+||.||+|...+++.||||++...... ..+.|.+|++++++++ |||||++++++.. .
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-------~ 128 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-------D 128 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------S
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-------C
Confidence 358888999999999999999888999999999765432 3467999999999996 5999999998875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||| +.+|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+
T Consensus 129 ~~~~lv~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~ 200 (390)
T 2zmd_A 129 QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGI 200 (390)
T ss_dssp SEEEEEEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSS
T ss_pred CEEEEEEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCc
Confidence 56899999 5688999999864 3689999999999999999999997 999999999999996 57899999999
Q ss_pred ccccccccc---cccccccccccCcccccc-----------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 633 PLLAENAEK---VGHVIPYSGSIDPTNSAR-----------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 633 ~~~~~~~~~---~~~~~~~~~~~aPe~~~~-----------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
++....... .....++..|+|||.+.. ..++.++|||||||++|||++|++||....... ..+.
T Consensus 201 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~~~~ 278 (390)
T 2zmd_A 201 ANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLH 278 (390)
T ss_dssp SCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHH
T ss_pred cccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--HHHH
Confidence 976543221 233467889999998754 368999999999999999999999997532111 1111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... . ....+... ...+.+++.+||+.||++|||+.||++|+|+..
T Consensus 279 ~~~~~~---~----~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~ 326 (390)
T 2zmd_A 279 AIIDPN---H----EIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326 (390)
T ss_dssp HHHCTT---S----CCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred HHhCcc---c----cCCCCccc----hHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence 111110 0 00011111 235668888999999999999999999999864
No 131
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-39 Score=365.39 Aligned_cols=273 Identities=18% Similarity=0.289 Sum_probs=190.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+++|++++|||||++++++..... ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~~~ 130 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV--EKFD 130 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT--TTCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCc--ccCc
Confidence 57889999999999999999854 6899999999754322 24679999999999999999999999864221 2235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+||||+. |+|.+++... ..+++.....++.|++.||.|||+. +||||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 6899999985 7999999753 3699999999999999999999997 9999999999999999999999999999
Q ss_pred ccccccc----------------------------ccccccccccccCcccc-ccCCCCcccceeehhHHHHHHHh----
Q 003926 634 LLAENAE----------------------------KVGHVIPYSGSIDPTNS-ARGKLEEKIDIYDFGLILLEIIV---- 680 (786)
Q Consensus 634 ~~~~~~~----------------------------~~~~~~~~~~~~aPe~~-~~~~~t~ksDVwSfGvvl~Ellt---- 680 (786)
+...... ......++..|+|||.+ ....|+.++|||||||++|||+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 7653211 12234567889999975 45669999999999999999999
Q ss_pred -------CCCCCCCchh---------------------HHHHHHHHHHHHhccccccc-----------cccc---cccc
Q 003926 681 -------GRPLKSRKEV---------------------DLLKNQLQAVVTADESARRS-----------MVDP---AVNK 718 (786)
Q Consensus 681 -------G~~p~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~-----------~~d~---~~~~ 718 (786)
|+++|.+... +.+..+.............. .... ....
T Consensus 284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 6666644321 11111111100000000000 0000 0000
Q ss_pred cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 719 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 719 ~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 0111123457789999999999999999999999998764
No 132
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=341.47 Aligned_cols=256 Identities=18% Similarity=0.288 Sum_probs=198.7
Q ss_pred CCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
+|.....||+|+||.||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++.. .+..+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~ 95 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-------NGFIK 95 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-------TTEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-------CCcEE
Confidence 345566899999999999995 4689999999987655556789999999999999999999999875 45689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-CCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-NLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DfGl~~~ 635 (786)
+||||+++|+|.+++........+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++..
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~ 172 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKR 172 (295)
T ss_dssp EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEE
T ss_pred EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccc
Confidence 9999999999999998654444678899999999999999999997 9999999999999997 89999999999865
Q ss_pred ccccc-ccccccccccccCccccccC--CCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 636 AENAE-KVGHVIPYSGSIDPTNSARG--KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~aPe~~~~~--~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
..... ......++..|+|||..... .++.++||||||+++|||++|+.||........... ...... .
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~--------~ 243 (295)
T 2clq_A 173 LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KVGMFK--------V 243 (295)
T ss_dssp SCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH-HHHHHC--------C
T ss_pred cCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH-hhcccc--------c
Confidence 43321 12234567789999987654 388999999999999999999999865322211111 110000 1
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.+.+....+ ..+.+++.+||+.||++|||+.|+++|.|+.
T Consensus 244 ~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~ 283 (295)
T 2clq_A 244 HPEIPESMS----AEAKAFILKCFEPDPDKRACANDLLVDEFLK 283 (295)
T ss_dssp CCCCCTTSC----HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred cccccccCC----HHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 111222222 3566788899999999999999999888764
No 133
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.6e-40 Score=351.64 Aligned_cols=264 Identities=16% Similarity=0.221 Sum_probs=204.9
Q ss_pred HHHHHhcCCCcc-CccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCC-CCCcceeeeeeeec
Q 003926 471 ELEEATNNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLR-HRHLVSALGHCFEC 545 (786)
Q Consensus 471 ~l~~~~~~f~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~ 545 (786)
..+...+.|... +.||+|+||.||+|+.. +|+.||||+++.... ....++.+|+.++++++ ||||+++++++..
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~- 100 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN- 100 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-
Confidence 334445556665 88999999999999965 699999999976543 23578999999999994 6999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---C
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---N 622 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~ 622 (786)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. +
T Consensus 101 ------~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~ 170 (327)
T 3lm5_A 101 ------TSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPL 170 (327)
T ss_dssp ------SSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTB
T ss_pred ------CCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCC
Confidence 456899999999999999986532 34689999999999999999999997 9999999999999998 7
Q ss_pred CcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH
Q 003926 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (786)
+.+||+|||+++............++..|+|||.+....++.++|||||||++|||++|+.||...........+..
T Consensus 171 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~--- 247 (327)
T 3lm5_A 171 GDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ--- 247 (327)
T ss_dssp CCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---
T ss_pred CcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh---
Confidence 89999999999766544444445678899999999888999999999999999999999999976554333222111
Q ss_pred hccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 703 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... . ..+.. .......+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 248 ~~~----~-~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~ 293 (327)
T 3lm5_A 248 VNV----D-YSEET----FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293 (327)
T ss_dssp TCC----C-CCTTT----TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred ccc----c-cCchh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence 100 0 00111 1112235668888999999999999999999999754
No 134
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.2e-39 Score=366.61 Aligned_cols=257 Identities=18% Similarity=0.226 Sum_probs=205.7
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-------------CChHHHHHHHHHHhcCCCCCcceeeee
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-------------HSTRNFMHHIELISKLRHRHLVSALGH 541 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~NIv~l~g~ 541 (786)
.++|...+.||+|+||+||+|+.+ +++.||||++..... ...+.+.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999965 689999999975432 234679999999999999999999999
Q ss_pred eeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
+.. ....++|||||++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 115 ~~~-------~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 181 (504)
T 3q5i_A 115 FED-------KKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLEN 181 (504)
T ss_dssp EEC-------SSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESS
T ss_pred EEc-------CCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEec
Confidence 865 45789999999999999998753 3589999999999999999999997 9999999999999997
Q ss_pred CC---cccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 622 NL---VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 622 ~~---~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
++ .+||+|||++.............++..|+|||.+. +.|+.++||||+||++|||++|++||.......+...+.
T Consensus 182 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~ 260 (504)
T 3q5i_A 182 KNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260 (504)
T ss_dssp TTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 75 69999999997665544445567888999999875 579999999999999999999999998765544333222
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.. . . ..+..... .....+.+++.+||+.||.+|||+.|+++|+|+.+.
T Consensus 261 ~~---~---~--~~~~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 261 KG---K---Y--YFDFNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308 (504)
T ss_dssp HC---C---C--CCCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred cC---C---C--CCCccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence 11 0 0 00100001 112356788889999999999999999999998764
No 135
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7e-39 Score=334.22 Aligned_cols=252 Identities=20% Similarity=0.360 Sum_probs=203.5
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
++|+..+.||+|+||.||+|+..++..||||++.... ...+++.+|++++++++||||+++++++.. .+..+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~~~ 79 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-------QAPIC 79 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-------SSSCE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CCCeE
Confidence 4677789999999999999998888999999997654 345789999999999999999999998864 34689
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 80 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 154 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFV 154 (267)
T ss_dssp EEECCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred EEEeCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccc
Confidence 9999999999999997642 3589999999999999999999997 9999999999999999999999999998655
Q ss_pred cccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 637 ENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 637 ~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
.... ......++..|+|||......++.++||||||+++|||++ |++||...........+. ... . ...
T Consensus 155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~---~~~----~-~~~ 226 (267)
T 3t9t_A 155 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS---TGF----R-LYK 226 (267)
T ss_dssp CCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH---TTC----C-CCC
T ss_pred ccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh---cCC----c-CCC
Confidence 3221 1122334567999999988889999999999999999999 899997655433322211 110 0 001
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
+ ... ...+.+++.+||+.||++|||+.|+++++...
T Consensus 227 ~---~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 227 P---RLA----STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp C---TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---ccC----cHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 111 23566788899999999999999999999744
No 136
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.3e-39 Score=348.17 Aligned_cols=257 Identities=22% Similarity=0.360 Sum_probs=203.5
Q ss_pred HhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~ 547 (786)
..++|...+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|++++++++|||||++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 356788889999999999999985 2458999999975432 234678999999999999999999998864
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC---------------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +
T Consensus 98 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ 170 (314)
T 2ivs_A 98 ----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---K 170 (314)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ----CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---C
Confidence 3568999999999999999976422 12489999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
|+||||||+||+++.++.+||+|||++........ .....++..|+|||......++.++|||||||++|||+| |+
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 250 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999865533221 122234567999999888889999999999999999999 99
Q ss_pred CCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 683 PLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 683 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.||.......+...+.. .. .+.....+ ...+.+++.+||+.||++||++.||++++...
T Consensus 251 ~p~~~~~~~~~~~~~~~---~~--------~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 251 NPYPGIPPERLFNLLKT---GH--------RMERPDNC----SEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp CSSTTCCGGGHHHHHHT---TC--------CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhhc---CC--------cCCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99976655443332211 00 01111112 23567888899999999999999999998744
No 137
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-39 Score=349.66 Aligned_cols=269 Identities=21% Similarity=0.344 Sum_probs=202.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|++++++++||||+++++++.. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~ 96 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-------K 96 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------T
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-------C
Confidence 356788899999999999999965 58999999986554322 3568899999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 97 KRWYLVFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp TEEEEEEECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCC
Confidence 5689999999999999887643 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHh------
Q 003926 633 PLLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTA------ 703 (786)
Q Consensus 633 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~------ 703 (786)
+...... .......++..|+|||.+... .++.++|||||||++|||++|++||....... ...........
T Consensus 171 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (331)
T 4aaa_A 171 ARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQE 250 (331)
T ss_dssp C------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred ceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhh
Confidence 8654322 222344577889999988765 68999999999999999999999997654332 22221111000
Q ss_pred ---ccccccccccccccccC-----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 704 ---DESARRSMVDPAVNKAC-----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 704 ---~~~~~~~~~d~~~~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..........+...... .......+.+++.+||+.||++|||+.|+++|+||..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 312 (331)
T 4aaa_A 251 LFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312 (331)
T ss_dssp HHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred HhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence 00000001111111100 1122346778899999999999999999999999875
No 138
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=350.63 Aligned_cols=257 Identities=22% Similarity=0.350 Sum_probs=201.0
Q ss_pred HhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
..++|...+.||+|+||.||+|+. .++..||||++..... ...+.+.+|+++++++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 456788899999999999999985 2467899999975432 3457899999999999 89999999998864
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCC--------------------CCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAH--------------------QSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~--------------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
.+..++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +
T Consensus 121 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 192 (344)
T 1rjb_A 121 -----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---S 192 (344)
T ss_dssp -----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred -----CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 35689999999999999999764321 2489999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
|+||||||+||+++.++.+||+|||++........ .....++..|+|||.+....++.++|||||||++|||+| |+
T Consensus 193 ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 272 (344)
T 1rjb_A 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 272 (344)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred cccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999865533221 122344567999999988889999999999999999998 99
Q ss_pred CCCCCchhHH-HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 683 PLKSRKEVDL-LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 683 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.||....... ....+. .. ..+.....+ ...+.+++.+||+.||.+|||+.||+++++..
T Consensus 273 ~p~~~~~~~~~~~~~~~----~~-------~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 273 NPYPGIPVDANFYKLIQ----NG-------FKMDQPFYA----TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp CSSTTCCCSHHHHHHHH----TT-------CCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccCCcHHHHHHHHh----cC-------CCCCCCCCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 9997644322 211111 10 001111112 23567788899999999999999999999744
No 139
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.1e-39 Score=351.63 Aligned_cols=268 Identities=16% Similarity=0.285 Sum_probs=206.0
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+.. +|..||+|++..... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~ 105 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------DGE 105 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-------TTE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-------CCE
Confidence 46788899999999999999965 689999999976532 224679999999999999999999999875 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++... ..+++.....++.+++.||.|||+. .+|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 180 (360)
T 3eqc_A 106 ISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG 180 (360)
T ss_dssp EEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred EEEEEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCc
Confidence 89999999999999999763 3589999999999999999999973 179999999999999999999999999986
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc-------
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA------- 707 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------- 707 (786)
..... ......++..|+|||.+....++.++|||||||++|||+||+.||......................
T Consensus 181 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3eqc_A 181 QLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 259 (360)
T ss_dssp HHHHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------
T ss_pred ccccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCccc
Confidence 44322 1223457788999999988889999999999999999999999997655433322211000000000
Q ss_pred ------------------------ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 708 ------------------------RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 708 ------------------------~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
......+.... ......+.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 333 (360)
T 3eqc_A 260 PGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 333 (360)
T ss_dssp --------------CCCHHHHHHHHHHSCCCCCCT---TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred CCCcccccccCCCCcccchhhhhHHhccCCCCCCc---ccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence 00000000000 111235778888999999999999999999999987544
No 140
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=357.39 Aligned_cols=272 Identities=18% Similarity=0.245 Sum_probs=209.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|...+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++... ....
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~ 83 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET-----TTRH 83 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT-----TTCC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC-----CCCe
Confidence 45778899999999999999965 599999999986543 3467789999999999999999999988642 2346
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee----cCCCcccccCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKISSY 630 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~Df 630 (786)
.++|||||++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DF 160 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (396)
T ss_dssp EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecC
Confidence 899999999999999998643334599999999999999999999998 99999999999999 88889999999
Q ss_pred CcccccccccccccccccccccCcccccc--------CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHH
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSAR--------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVV 701 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~--------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~ 701 (786)
|+++............++..|+|||.+.. ..++.++|||||||++|||+||+.||..... ......+....
T Consensus 161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 99976655444445567889999998754 4578899999999999999999999853221 11112222222
Q ss_pred Hhccccc----cccc------cccc--cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 702 TADESAR----RSMV------DPAV--NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 702 ~~~~~~~----~~~~------d~~~--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
....... .... +... ...........+.+++.+||+.||++||++.|+++++...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 2111000 0000 0011 1123355667788899999999999999999999887643
No 141
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.1e-39 Score=338.94 Aligned_cols=254 Identities=18% Similarity=0.318 Sum_probs=192.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|+..+.||+|+||.||+|+.. .+..||||+++.... ...+.|.+|+.++++++||||+++++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 456778899999999999999864 256799999875432 224679999999999999999999998742
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++||||+++|+|.+++.... ..+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 160 (281)
T 1mp8_A 88 --NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF 160 (281)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-
T ss_pred --CccEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcc
Confidence 35799999999999999997542 3689999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 631 NLPLLAENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 631 Gl~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|+++........ ....++..|+|||......++.++||||||+++|||++ |++||...........+. ...
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~---~~~--- 234 (281)
T 1mp8_A 161 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE---NGE--- 234 (281)
T ss_dssp ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH---TTC---
T ss_pred ccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH---cCC---
Confidence 998665432211 22234557999999988889999999999999999997 999997654433322221 100
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. +.....+ ...+.+++.+||+.||++|||+.|+++++....
T Consensus 235 ~-----~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 235 R-----LPMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp C-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C-----CCCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 0111122 235667888999999999999999999997543
No 142
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=343.95 Aligned_cols=259 Identities=20% Similarity=0.368 Sum_probs=197.8
Q ss_pred cCCCccCccCCCCCceeEEEEecC-----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN-----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|...+.||+|+||.||+|+... +..||||+++.... .....|.+|++++++++||||+++++++..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 117 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK------ 117 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec------
Confidence 345667899999999999998642 34699999975432 234579999999999999999999998864
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++||||+++|+|.+++... ...+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 118 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 191 (333)
T 1mqb_A 118 -YKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDF 191 (333)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred -CCCcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCC
Confidence 45689999999999999999763 24689999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 631 NLPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 631 Gl~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|+++....... .....++..|+|||......++.++|||||||++|||++ |+.||.......+...+. ...
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~---~~~- 267 (333)
T 1mqb_A 192 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN---DGF- 267 (333)
T ss_dssp CC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH---TTC-
T ss_pred CcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH---CCC-
Confidence 99865533211 111223457999999988889999999999999999999 999997654433322211 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
. +.....++ ..+.+++.+||+.||++||++.||++++.........
T Consensus 268 ---~----~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 268 ---R----LPTPMDCP----SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp ---C----CCCCTTCB----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred ---c----CCCcccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 0 00111122 3567888899999999999999999999765543333
No 143
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.3e-39 Score=335.67 Aligned_cols=253 Identities=18% Similarity=0.356 Sum_probs=198.3
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+.+ |+.||||+++..... ..+.|.+|++++++++||||+++++++... ..+.
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 83 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP-----PAPH 83 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT-----TSSS
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC-----CCCC
Confidence 46778899999999999999986 889999999865432 246799999999999999999999988641 2356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. .++|+||||||+||+++.++.+|++|||++.
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eEeeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEecccee
Confidence 899999999999999998642 23689999999999999999999986 1239999999999999999999999888764
Q ss_pred ccccccccccccccccccCccccccCCCC---cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLE---EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t---~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
.... ....++..|+|||.+....++ .++|||||||++|||++|+.||...........+ ....
T Consensus 162 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~------- 227 (271)
T 3kmu_A 162 SFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV---ALEG------- 227 (271)
T ss_dssp TTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH---HHSC-------
T ss_pred eecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH---HhcC-------
Confidence 3322 223457789999998765444 3899999999999999999999765443322111 1111
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+.....++ ..+.+++.+||+.||++|||+.|+++.+..
T Consensus 228 ~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 228 LRPTIPPGIS----PHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111112222 356788889999999999999999998864
No 144
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.4e-39 Score=348.96 Aligned_cols=265 Identities=14% Similarity=0.200 Sum_probs=202.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. .....
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~-----~~~~~ 107 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKD-----PVSRT 107 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----TTTCC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeecc-----CCCCc
Confidence 5688899999999999999985 57899999998743 3678999999999997 9999999998864 22456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC-cccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL-VAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DfGl~ 633 (786)
.++||||+++|+|.+++.. +++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 108 ~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 8999999999999999853 78899999999999999999997 999999999999999776 8999999999
Q ss_pred cccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCc--hhHHHHHHHHHHHHhcc----c
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRK--EVDLLKNQLQAVVTADE----S 706 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~--~~~~~~~~~~~~~~~~~----~ 706 (786)
+............++..|+|||.... ..++.++|||||||++|||++|+.||... ..+.+............ .
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 179 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp EECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred eEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 76654444445567788999998866 66899999999999999999999998432 22222221111100000 0
Q ss_pred cccccccc----------------cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 ARRSMVDP----------------AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 ~~~~~~d~----------------~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
......++ .............+.+++.+||+.||++|||++|+++|+||...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence 00000000 00000111123467788899999999999999999999998754
No 145
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=373.31 Aligned_cols=244 Identities=18% Similarity=0.280 Sum_probs=194.7
Q ss_pred ccCCCCCceeEEEEec---CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 484 FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.||+|+||.||+|.++ ++..||||+++.... ...++|.+|+++|++++|||||+++|+|.. +..++||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--------~~~~lv~ 414 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--------EALMLVM 414 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--------SSEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--------CCeEEEE
Confidence 7999999999999864 467899999986543 346789999999999999999999999853 3489999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENA 639 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~ 639 (786)
|||++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 415 E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp ECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred EeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 999999999999753 34699999999999999999999997 9999999999999999999999999999765322
Q ss_pred ccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 640 EKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 640 ~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
... ....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......+...+.. . . + .
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~----~--~-~----~ 558 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ----G--K-R----M 558 (613)
T ss_dssp ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT----T--C-C----C
T ss_pred CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc----C--C-C----C
Confidence 211 11223457999999988899999999999999999998 9999976554433322211 0 0 0 1
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..+..++ ..+.+++.+||+.||++||++.+|++.|..
T Consensus 559 ~~p~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 559 ECPPECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp CCCTTCC----HHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCcCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111222 456788899999999999999999988863
No 146
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.4e-39 Score=349.80 Aligned_cols=250 Identities=15% Similarity=0.207 Sum_probs=180.1
Q ss_pred cCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceEEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.+.||+|+||.||+|+.+ +|+.||||++... ....+.+|++++++++ |||||++++++.. ....|+||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-------~~~~~lv~ 85 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHD-------QLHTFLVM 85 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------SSEEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-------CCEEEEEE
Confidence 478999999999999975 6899999998643 3567889999999997 9999999999865 45689999
Q ss_pred ecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC---cccccCCCccccc
Q 003926 560 EYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL---VAKISSYNLPLLA 636 (786)
Q Consensus 560 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl~DfGl~~~~ 636 (786)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++..
T Consensus 86 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 86 ELLNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp CCCCSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred EccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 999999999999863 3689999999999999999999997 999999999999997665 8999999998654
Q ss_pred ccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH----HHHHHHHHHHHhcccccccc
Q 003926 637 ENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD----LLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 637 ~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 711 (786)
... .......++..|+|||.+....++.++|||||||++|||++|++||...... .............
T Consensus 160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~------- 232 (325)
T 3kn6_A 160 PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD------- 232 (325)
T ss_dssp CC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC-------
T ss_pred CCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC-------
Confidence 332 2223445678899999998888999999999999999999999999754321 1111111111100
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..............+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 233 --~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~ 275 (325)
T 3kn6_A 233 --FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275 (325)
T ss_dssp --CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGC
T ss_pred --CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhc
Confidence 0000011112234577888999999999999999999888764
No 147
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1e-39 Score=374.40 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=203.4
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..++|...+.||+|+||.||+|+++++..||||+++... ...++|.+|+++|++++|||||+++++|.+ +.
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--------~~ 335 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--------EP 335 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee--------cc
Confidence 455677889999999999999999888889999998654 346789999999999999999999998753 34
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++|||||++|+|.+++.... ...+++.+++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 336 ~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 411 (535)
T 2h8h_A 336 IYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 411 (535)
T ss_dssp CEEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred ceEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccce
Confidence 799999999999999997421 23589999999999999999999997 99999999999999999999999999997
Q ss_pred ccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
....... .....++..|+|||.+..+.++.++|||||||++|||+| |+.||.......+...+.. . .+
T Consensus 412 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~----~---~~-- 482 (535)
T 2h8h_A 412 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER----G---YR-- 482 (535)
T ss_dssp TCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT----T---CC--
T ss_pred ecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C---CC--
Confidence 6543211 112234567999999988899999999999999999999 9999976554333322211 0 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
......++ ..+.+++.+||+.||++|||+.+|++.|.
T Consensus 483 --~~~~~~~~----~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 483 --MPCPPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp --CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 01111222 35678888999999999999999998885
No 148
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.9e-39 Score=352.26 Aligned_cols=266 Identities=10% Similarity=0.085 Sum_probs=199.8
Q ss_pred hcCCCccCccCCCCCceeEEEEecC------CcEEEEEEecccCCC-----------ChHHHHHHHHHHhcCCCCCccee
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN------GTFVAIRCLKMKKCH-----------STRNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~NIv~l 538 (786)
.++|...+.||+|+||.||+|+.+. ++.||||++...... ....+.+|+..++.++|||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578889999999999999998754 478999998654311 11235567778888999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
++++.... ......++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||
T Consensus 114 ~~~~~~~~---~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nil 184 (364)
T 3op5_A 114 WGSGLHDK---NGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEE---TTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred Eeeeeecc---CCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEE
Confidence 99987521 1235689999999 99999999763 24699999999999999999999998 9999999999999
Q ss_pred ec--CCCcccccCCCccccccccccc--------ccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCc
Q 003926 619 LD--QNLVAKISSYNLPLLAENAEKV--------GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRK 688 (786)
Q Consensus 619 ld--~~~~~kl~DfGl~~~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~ 688 (786)
++ .++.+||+|||+++........ ....++..|+|||.+....++.++|||||||++|||+||+.||...
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99 8899999999999655332211 2234788999999998888999999999999999999999999753
Q ss_pred hh-HHHHHHHHHHHHhcccccccccccccc-ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 689 EV-DLLKNQLQAVVTADESARRSMVDPAVN-KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 689 ~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. ............. ....+.++.+. ..+ +..+.+++..||+.||++||++.+|++.+....
T Consensus 265 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 265 LKDPKYVRDSKIRYRE---NIASLMDKCFPAANA----PGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp TTCHHHHHHHHHHHHH---CHHHHHHHHSCTTCC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhhh---hHHHHHHHhcccccC----HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 22 1111111111111 11122222211 112 235667888999999999999999999886443
No 149
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=8e-39 Score=350.61 Aligned_cols=272 Identities=16% Similarity=0.183 Sum_probs=197.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS-LEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCS-TTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccc-cccc
Confidence 356888999999999999999854 6899999999754322 24578999999999999999999998864211 0112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||++ |+|.+++.. .+++.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCC-CCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 46899999998 478888863 488999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-ccc----
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESA---- 707 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~---- 707 (786)
++............++..|+|||.+....++.++|||||||++|||++|+.||...+.......+....... ...
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 976544333344567788999999988889999999999999999999999997654322211111000000 000
Q ss_pred ----------ccc--------cccccc-c--ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 708 ----------RRS--------MVDPAV-N--KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 708 ----------~~~--------~~d~~~-~--~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ...... + ..........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 000 000000 0 0011223457889999999999999999999999999874
No 150
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.5e-39 Score=360.24 Aligned_cols=272 Identities=19% Similarity=0.261 Sum_probs=200.9
Q ss_pred CCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.|+..+.||+|+||+||+|+.. +|+.||||++..... .+.+|+++|++++|||||++++++..... .......+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~-~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGE-KKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEET-TTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCC-CCcceeEE
Confidence 5777899999999999999975 699999999865432 23479999999999999999999865321 11233467
Q ss_pred EEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-CcccccCCCccc
Q 003926 557 LIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN-LVAKISSYNLPL 634 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DfGl~~ 634 (786)
+||||+++ +|.+.+... .....+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 666655421 1234689999999999999999999997 99999999999999965 678999999997
Q ss_pred ccccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccc------
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADES------ 706 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~------ 706 (786)
............++..|+|||.+... .|+.++|||||||++|||++|++||..... +.+...+.........
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 65444333445678889999988654 699999999999999999999999976543 3333333221111000
Q ss_pred -cccccccccccccC-----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 707 -ARRSMVDPAVNKAC-----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 707 -~~~~~~d~~~~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+..-+.+.... .......+.+++.+||+.||++|||+.|+++|+||...
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 00111111111110 11123467789999999999999999999999998653
No 151
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.9e-39 Score=337.70 Aligned_cols=252 Identities=19% Similarity=0.287 Sum_probs=205.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 86 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-------R 86 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-------C
Confidence 56888899999999999999965 68899999986532 2345779999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 160 (284)
T 2vgo_A 87 KRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGW 160 (284)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccc
Confidence 5689999999999999999753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
+....... .....++..|+|||......++.++||||||+++|||++|+.||...........+. ..
T Consensus 161 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~--------- 227 (284)
T 2vgo_A 161 SVHAPSLR-RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV---NV--------- 227 (284)
T ss_dssp CEECSSSC-BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---TT---------
T ss_pred cccCcccc-cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh---cc---------
Confidence 86543322 233456788999999988889999999999999999999999997654433221111 10
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+...+... ...+.+++.+||+.||.+|||+.|+++|+|+...
T Consensus 228 ~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 228 DLKFPPFL----SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp CCCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred ccCCCCcC----CHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 01111111 2346678889999999999999999999998764
No 152
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-39 Score=351.55 Aligned_cols=257 Identities=17% Similarity=0.295 Sum_probs=201.4
Q ss_pred hcCCCccCccCCCCCceeEEEEe----cCCcEEEEEEecccC----CCChHHHHHHHHHHhcC-CCCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL----KNGTFVAIRCLKMKK----CHSTRNFMHHIELISKL-RHRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~ 546 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 130 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-- 130 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence 35788899999999999999986 368999999997542 23356688899999999 69999999998865
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccc
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 626 (786)
.+..++||||+++|+|.+++... ..+++.....++.|+++||.|||+. +|+||||||+|||++.++.+|
T Consensus 131 -----~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~k 199 (355)
T 1vzo_A 131 -----ETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVV 199 (355)
T ss_dssp -----TTEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred -----CceEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEE
Confidence 45689999999999999999753 3589999999999999999999997 999999999999999999999
Q ss_pred ccCCCcccccccc--cccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHH
Q 003926 627 ISSYNLPLLAENA--EKVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVV 701 (786)
Q Consensus 627 l~DfGl~~~~~~~--~~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~ 701 (786)
|+|||+++..... .......++..|+|||.+.. ..++.++|||||||++|||+||+.||..... ...........
T Consensus 200 l~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 279 (355)
T 1vzo_A 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279 (355)
T ss_dssp ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred EeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHh
Confidence 9999998654322 12233467889999999875 3478999999999999999999999864321 11111221111
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-----SVEDVLWNLQFAAQ 758 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----t~~evl~~l~~~~~ 758 (786)
... +..... ....+.+++.+||+.||++|| ++.|+++|+||...
T Consensus 280 ~~~---------~~~~~~----~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 280 KSE---------PPYPQE----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HCC---------CCCCTT----SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred ccC---------CCCCcc----cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 111 111111 123466788899999999999 99999999998753
No 153
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.8e-39 Score=358.48 Aligned_cols=274 Identities=17% Similarity=0.220 Sum_probs=200.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIF 556 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~ 556 (786)
.+|...+.||+|+||+||+|+...+..||||++...... ..+|++++++++|||||++++++..... .......+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~-~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGD-KKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESS-SSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCC-CCCceEEE
Confidence 357788999999999999999877677999988644321 2379999999999999999999875321 12234578
Q ss_pred EEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccccCCCcccc
Q 003926 557 LIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPLL 635 (786)
Q Consensus 557 LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DfGl~~~ 635 (786)
+||||++++.+............+++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999999754444332211234689999999999999999999997 999999999999999 799999999999976
Q ss_pred cccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHHHHHhcccc------
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVVTADESA------ 707 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~------ 707 (786)
...........++..|+|||.+.+. .|+.++|||||||++|||++|++||...... .+...+..........
T Consensus 192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 6444444445677889999987654 5899999999999999999999999875433 3333322211110000
Q ss_pred -ccccccccccc-----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 -RRSMVDPAVNK-----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 -~~~~~d~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.....-+.... .........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 00000000000 0111123467789999999999999999999999998653
No 154
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.2e-39 Score=348.81 Aligned_cols=254 Identities=17% Similarity=0.283 Sum_probs=206.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 112 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED------- 112 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-------
Confidence 356778899999999999999965 5889999998765322 34678999999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 186 (335)
T 2owb_A 113 NDFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 186 (335)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeecc
Confidence 45689999999999999998753 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccc-ccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAEN-AEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++..... ........++..|+|||.+....++.++|||||||++|||++|+.||...........+. ...
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~------ 257 (335)
T 2owb_A 187 LATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK---KNE------ 257 (335)
T ss_dssp TCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HTC------
T ss_pred CceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh---cCC------
Confidence 9865532 222334457788999999988889999999999999999999999997654433221111 110
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
........ ..+.+++.+||+.||++|||+.|+++|.|+...
T Consensus 258 ---~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 258 ---YSIPKHIN----PVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp ---CCCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred ---CCCCccCC----HHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 01111111 245678889999999999999999999998753
No 155
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-39 Score=352.78 Aligned_cols=253 Identities=21% Similarity=0.370 Sum_probs=190.5
Q ss_pred CCCccCccCCCCCceeEEEEec--C--CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLK--N--GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~--~--g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.|...+.||+|+||+||+|+.. + +..||||.++.... ...++|.+|+.++++++|||||+++++|.+. .
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------~ 163 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS------E 163 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC------S
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Confidence 3556789999999999999863 2 24689999875432 2356799999999999999999999987641 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 164 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~ 238 (373)
T 3c1x_A 164 GSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGL 238 (373)
T ss_dssp SCCEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--
T ss_pred CCeEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccc
Confidence 4579999999999999999753 23588999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc-----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 633 PLLAENAEK-----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 633 ~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
++....... .....++..|+|||......++.++|||||||++|||+| |.+||...........+. ..
T Consensus 239 a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~----~~-- 312 (373)
T 3c1x_A 239 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL----QG-- 312 (373)
T ss_dssp -------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH----TT--
T ss_pred cccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH----cC--
Confidence 865432211 122334567999999988899999999999999999999 678876544333222111 11
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.....| ..++ ..+.+++.+||+.||++|||+.|+++++...
T Consensus 313 --~~~~~p---~~~~----~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 313 --RRLLQP---EYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp --CCCCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCCCCC---CCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 011111 1222 3567888899999999999999999999744
No 156
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=9.8e-39 Score=339.85 Aligned_cols=253 Identities=19% Similarity=0.345 Sum_probs=206.7
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
+.|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 94 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-------DTK 94 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------TTE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-------CCe
Confidence 4578889999999999999985 4689999999976543 345789999999999999999999999875 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 95 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 167 (303)
T 3a7i_A 95 LWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 167 (303)
T ss_dssp EEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccce
Confidence 8999999999999999964 3589999999999999999999997 99999999999999999999999999986
Q ss_pred cccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... ......++..|+|||......++.++||||||+++|||++|++|+...........+. ... .
T Consensus 168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~--------~ 236 (303)
T 3a7i_A 168 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP---KNN--------P 236 (303)
T ss_dssp ECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HSC--------C
T ss_pred ecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh---cCC--------C
Confidence 543322 2233456778999999988889999999999999999999999997654433222111 110 0
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.....++ ..+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 237 ~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 237 PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp CCCCSSCC----HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred CCCccccC----HHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 11111222 346678889999999999999999999998764
No 157
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.4e-39 Score=344.01 Aligned_cols=256 Identities=20% Similarity=0.336 Sum_probs=202.2
Q ss_pred hcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFECYF 547 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~ 547 (786)
.++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.|.+|+++++++ +||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI--- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec---
Confidence 45678889999999999999985 2478999999975543 2346799999999999 99999999999864
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCC---------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHA---------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~---------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +|+||||
T Consensus 99 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl 171 (313)
T 1t46_A 99 ----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDL 171 (313)
T ss_dssp ----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ----CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence 3567999999999999999976432 12489999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+||+++.++.+||+|||++........ .....++..|+|||......++.++||||||+++|||+| |+.||...
T Consensus 172 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999999865543322 122334567999999888899999999999999999999 99998764
Q ss_pred hhHH-HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 689 EVDL-LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 689 ~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.... ....+.. . .... ..... ...+.+++.+||+.||.+|||+.|+++++...
T Consensus 252 ~~~~~~~~~~~~----~---~~~~----~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 252 PVDSKFYKMIKE----G---FRML----SPEHA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp CSSHHHHHHHHH----T---CCCC----CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhHHHHHhcc----C---CCCC----CcccC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 4322 2111111 1 0110 11111 23567888899999999999999999998743
No 158
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.5e-38 Score=337.37 Aligned_cols=257 Identities=10% Similarity=0.081 Sum_probs=200.4
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++++ +|+|++++++++.. ...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-------~~~ 80 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-------GLH 80 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-------TTE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-------Cce
Confidence 4688889999999999999995 579999999986443 345688999999999 89999999998765 456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc-----ccccC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-----AKISS 629 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-----~kl~D 629 (786)
.++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~D 154 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVD 154 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECC
T ss_pred eEEEEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEE
Confidence 89999999 999999998642 3589999999999999999999997 9999999999999988776 99999
Q ss_pred CCcccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 630 YNLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 630 fGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
||++........ .....++..|+|||......++.++|||||||++|||++|+.||................
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (298)
T 1csn_A 155 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG 234 (298)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH
T ss_pred CccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH
Confidence 999865543221 233457788999999988889999999999999999999999997632211111111111
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..... ...+.....+ ...+.+++.+||+.||++||++++|++.+...
T Consensus 235 ~~~~~----~~~~~~~~~~----~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 235 EKKQS----TPLRELCAGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHH----SCHHHHTTTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hhccC----ccHHHHHhhC----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 10000 0001111112 23567888899999999999999999998744
No 159
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-39 Score=348.71 Aligned_cols=270 Identities=21% Similarity=0.306 Sum_probs=199.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-----ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-----STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
..++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 83 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH---- 83 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC----
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee----
Confidence 3567889999999999999999965 6899999999754321 13578899999999999999999998864
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
.+..++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ---~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 154 (346)
T 1ua2_A 84 ---KSNISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLA 154 (346)
T ss_dssp ---TTCCEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred ---CCceEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEE
Confidence 3568999999986 899988753 24588889999999999999999998 99999999999999999999999
Q ss_pred CCCcccccccc-cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhcc
Q 003926 629 SYNLPLLAENA-EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADE 705 (786)
Q Consensus 629 DfGl~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~ 705 (786)
|||+++..... .......++..|+|||.+... .++.++|||||||++|||++|++||....... +............
T Consensus 155 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~ 234 (346)
T 1ua2_A 155 DFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 234 (346)
T ss_dssp CCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCT
T ss_pred ecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 99998755322 223345677889999988654 58999999999999999999999987654433 2222222111111
Q ss_pred cccccc---ccc----cccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSM---VDP----AVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~---~d~----~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..+... .+. .... .........+.+++.+||+.||++|||+.|+++|+||..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~ 297 (346)
T 1ua2_A 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297 (346)
T ss_dssp TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence 111111 000 0000 000112346778899999999999999999999999764
No 160
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=337.82 Aligned_cols=257 Identities=18% Similarity=0.266 Sum_probs=201.3
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccC----CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKK----CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|...+.||+|+||.||+|... +++.||||+++... ....+.|.+|++++++++||||+++++++.. .
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~ 78 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN-----E 78 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----C
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc-----C
Confidence 467899999999999999999964 68999999997543 2335679999999999999999999998753 1
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.....++||||+++| |.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 79 ~~~~~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~df 153 (305)
T 2wtk_C 79 EKQKMYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISAL 153 (305)
T ss_dssp ---CEEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCCeEEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecc
Confidence 235689999999986 777776532 34689999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccc---cccccccccccccCccccccCC--CCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 631 NLPLLAENA---EKVGHVIPYSGSIDPTNSARGK--LEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 631 Gl~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~--~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|++...... .......++..|+|||...... ++.++||||||+++|||++|+.||...........+.. ..
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~---~~- 229 (305)
T 2wtk_C 154 GVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK---GS- 229 (305)
T ss_dssp TTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---CC-
T ss_pred ccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhc---CC-
Confidence 998654321 1222345678899999876543 47899999999999999999999987554333222211 10
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
......++ ..+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 230 --------~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 270 (305)
T 2wtk_C 230 --------YAIPGDCG----PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270 (305)
T ss_dssp --------CCCCSSSC----HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred --------CCCCCccC----HHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence 01111222 346678889999999999999999999998753
No 161
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-38 Score=347.04 Aligned_cols=275 Identities=16% Similarity=0.264 Sum_probs=205.1
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccc-cCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYF-DDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~-~~~~~ 552 (786)
++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++..... .....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688899999999999999996 5799999999875543 234678999999999999999999999875221 01113
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 568999999985 8888876532 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc-----cccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 633 PLLAENA-----EKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 633 ~~~~~~~-----~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
++..... .......++..|+|||.+.. ..++.++|||||||++|||+||++||...........+.........
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 8654321 12233456788999998765 45899999999999999999999999876554433333322221111
Q ss_pred c-ccccccccc---------cccCcHHH------HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 A-RRSMVDPAV---------NKACLDES------LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~-~~~~~d~~~---------~~~~~~~~------~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .....+... ......+. ...+.+++.+||+.||++|||+.|+++|+||..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 317 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence 1 111000000 00001111 234778999999999999999999999998753
No 162
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.6e-39 Score=339.95 Aligned_cols=253 Identities=23% Similarity=0.380 Sum_probs=202.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
..++|+..+.||+|+||.||+|+.+++..||||+++... ...+.|.+|++++++++||||+++++++.. +.
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~ 81 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------EP 81 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--------SS
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC--------CC
Confidence 345678889999999999999998888899999997543 346789999999999999999999998753 34
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 799999999999999997421 12589999999999999999999997 99999999999999999999999999986
Q ss_pred cccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 635 LAENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 635 ~~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
........ ....++..|+|||....+.++.++||||||+++|||++ |+.||...........+. .. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~----~~-- 228 (279)
T 1qpc_A 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE---RG----YR-- 228 (279)
T ss_dssp ECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---TT----CC--
T ss_pred cccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHh---cc----cC--
Confidence 55432211 22234567999999988889999999999999999999 899987654433322211 10 00
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+.....+ ...+.+++.+||+.||++|||+.|+++.+..
T Consensus 229 --~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 229 --MVRPDNC----PEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp --CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCcccc----cHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 1111112 2356788889999999999999999998863
No 163
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.5e-39 Score=347.03 Aligned_cols=255 Identities=20% Similarity=0.332 Sum_probs=198.7
Q ss_pred CCccCccCCCCCceeEEEEec-----CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-----NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
|+..+.||+|+||+||+|.++ +|+.||||+++.... ...+.|.+|++++++++||||+++++++... ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 107 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA-----GA 107 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TT
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC-----CC
Confidence 467899999999999998753 688999999986532 2246799999999999999999999998752 23
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 180 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred ceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccc
Confidence 5689999999999999999753 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHH-----------HH
Q 003926 633 PLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKN-----------QL 697 (786)
Q Consensus 633 ~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~-----------~~ 697 (786)
+........ .....++..|+|||.+....++.++||||||+++|||+||+.|+.......... .+
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL 260 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHH
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHH
Confidence 876543221 122345566999999988889999999999999999999999986533211100 00
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...... ....... ......+.+++.+||+.||++|||+.|+++.+...
T Consensus 261 ~~~~~~-------~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 261 TELLER-------GERLPRP----DKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp HHHHHT-------TCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhc-------ccCCCCC----ccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 000000 0011111 12224577888899999999999999999988744
No 164
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.8e-39 Score=346.66 Aligned_cols=258 Identities=19% Similarity=0.384 Sum_probs=203.3
Q ss_pred hcCCCccCccCCCCCceeEEEEec--------CCcEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
.++|...+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +||||++++++|..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-
Confidence 467888899999999999999863 477899999975532 2346789999999999 89999999998864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|+++||.|||+. +|+||||
T Consensus 113 ------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl 183 (334)
T 2pvf_A 113 ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDL 183 (334)
T ss_dssp ------SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred ------CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence 3568999999999999999986431 13489999999999999999999997 9999999
Q ss_pred CCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCc
Q 003926 613 KITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRK 688 (786)
Q Consensus 613 k~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~ 688 (786)
||+||+++.++.+||+|||++........ .....++..|+|||......++.++|||||||++|||+| |+.||...
T Consensus 184 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 99999999999999999999865543221 122234567999999888889999999999999999999 99999776
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 689 EVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
....+...+.. .. . +.....++ ..+.+++.+||+.||++|||+.|+++++.....
T Consensus 264 ~~~~~~~~~~~---~~----~----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 264 PVEELFKLLKE---GH----R----MDKPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp CHHHHHHHHHH---TC----C----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhc---CC----C----CCCCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 55443332221 10 0 11111222 356778889999999999999999999975543
No 165
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.2e-39 Score=341.13 Aligned_cols=252 Identities=18% Similarity=0.286 Sum_probs=204.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.. .
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~ 87 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-------N 87 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-------C
Confidence 45778899999999999999965 5889999998765332 24678999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 161 (294)
T 2rku_A 88 DFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 161 (294)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccC
Confidence 5689999999999999998753 3589999999999999999999997 999999999999999999999999999
Q ss_pred ccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccc
Q 003926 633 PLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSM 711 (786)
Q Consensus 633 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (786)
+...... .......++..|+|||......++.++||||||+++|||++|+.||...........+ .. ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~-~~------ 231 (294)
T 2rku_A 162 ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI---KK-NE------ 231 (294)
T ss_dssp CEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HT-TC------
T ss_pred ceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hh-cc------
Confidence 8654322 2223345678899999998888999999999999999999999999765443322111 11 10
Q ss_pred ccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
........ ..+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 232 --~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 232 --YSIPKHIN----PVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp --CCCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred --CCCccccC----HHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 01111111 34667888999999999999999999999864
No 166
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.3e-39 Score=340.05 Aligned_cols=246 Identities=20% Similarity=0.315 Sum_probs=195.5
Q ss_pred cCCCccCccCCCCCceeEEEEec-CC-------cEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NG-------TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g-------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
++|...+.||+|+||.||+|+.. ++ ..||+|++........+.|.+|++++++++||||+++++++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 83 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC---- 83 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC----
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe----
Confidence 46778899999999999999854 34 5799999987665667889999999999999999999999865
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc----
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---- 624 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---- 624 (786)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 84 ---~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 155 (289)
T 4fvq_A 84 ---GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTG 155 (289)
T ss_dssp ---TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGT
T ss_pred ---CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccc
Confidence 345799999999999999998632 3489999999999999999999998 9999999999999998887
Q ss_pred ----ccccCCCcccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhC-CCCCCCchhHHHHHHHH
Q 003926 625 ----AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 625 ----~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG-~~p~~~~~~~~~~~~~~ 698 (786)
+||+|||++...... ....++..|+|||.+.. ..++.++|||||||++|||++| .+|+.............
T Consensus 156 ~~~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~ 232 (289)
T 4fvq_A 156 NPPFIKLSDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE 232 (289)
T ss_dssp BCCEEEECCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred ccceeeeccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh
Confidence 999999998544322 22345677999998876 6699999999999999999995 45555443322221111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.. .. ..+. . ...+.+++.+||+.||++|||+.|+++++.
T Consensus 233 ----~~-~~----~~~~----~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 233 ----DR-HQ----LPAP----K----AAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp ----TT-CC----CCCC----S----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ----cc-CC----CCCC----C----CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 10 00 0111 1 123567888999999999999999999996
No 167
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.5e-39 Score=341.52 Aligned_cols=257 Identities=18% Similarity=0.334 Sum_probs=199.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.+.|+..+.||+|+||.||+|+.. +|+.||+|++........+.|.+|++++++++||||+++++++.. .+.
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~~ 90 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-------DGK 90 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------C-C
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-------CCe
Confidence 456888899999999999999975 589999999987666667889999999999999999999999875 356
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.++||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 165 (302)
T 2j7t_A 91 LWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA 165 (302)
T ss_dssp EEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence 89999999999999998753 23589999999999999999999997 99999999999999999999999999974
Q ss_pred cccc-ccccccccccccccCcccc-----ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 635 LAEN-AEKVGHVIPYSGSIDPTNS-----ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 635 ~~~~-~~~~~~~~~~~~~~aPe~~-----~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
.... ........++..|+|||.. ....++.++||||||+++|||++|++|+...........+ .... .
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~---~ 239 (302)
T 2j7t_A 166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI---AKSD---P 239 (302)
T ss_dssp HHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSC---C
T ss_pred cccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH---hccC---C
Confidence 3321 1122234567889999987 3567899999999999999999999999765433221111 1111 0
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+ ..+ ...+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 240 ~~~~~~---~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 281 (302)
T 2j7t_A 240 PTLLTP---SKW----SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281 (302)
T ss_dssp CCCSSG---GGS----CHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred cccCCc---ccc----CHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence 111111 111 235668888999999999999999999888653
No 168
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.8e-39 Score=348.73 Aligned_cols=260 Identities=19% Similarity=0.325 Sum_probs=204.7
Q ss_pred HHHHHHhcCCCccCccCCCCCceeEEEEec------CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeee
Q 003926 470 EELEEATNNFDTSAFMGEGSQGQMYRGRLK------NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHC 542 (786)
Q Consensus 470 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~ 542 (786)
++++...++|...+.||+|+||.||+|+.. +++.||||++..... .....|.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678889999999999999999854 378899999975432 2245699999999999999999999988
Q ss_pred eeccccCCCCceEEEEEecCCCCChhHHhhcCC-------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCC
Q 003926 543 FECYFDDSSVSRIFLIFEYVPNGTLRSWISEGH-------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKIT 615 (786)
Q Consensus 543 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~ 615 (786)
.. .+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 98 ~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~ 167 (322)
T 1p4o_A 98 SQ-------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAAR 167 (322)
T ss_dssp CS-------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGG
T ss_pred cc-------CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccc
Confidence 64 346899999999999999987421 123578999999999999999999998 9999999999
Q ss_pred ceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhH
Q 003926 616 DILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVD 691 (786)
Q Consensus 616 NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~ 691 (786)
||+++.++.+||+|||+++....... .....++..|+|||......++.++||||||+++|||+| |++|+......
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 247 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH
Confidence 99999999999999999865433221 122234567999999988889999999999999999999 88998765544
Q ss_pred HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.....+. ... .. .....+ ...+.+++.+||+.||++|||+.|+++++.
T Consensus 248 ~~~~~~~---~~~---~~-----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 248 QVLRFVM---EGG---LL-----DKPDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp HHHHHHH---TTC---CC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred HHHHHHH---cCC---cC-----CCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 3322211 110 00 011112 235667888999999999999999999986
No 169
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.2e-40 Score=343.31 Aligned_cols=259 Identities=19% Similarity=0.309 Sum_probs=203.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+.|.+|++++++++||||+++++++... ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR-----TN 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG-----GG
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC-----CC
Confidence 356888899999999999999965 6899999999765432 246799999999999999999999987642 23
Q ss_pred ceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC-----ccccCCCCCceeecCCCccc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPG-----VFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~-----ivHrdlk~~NILld~~~~~k 626 (786)
...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 56899999999999999997531 224589999999999999999999997 5 99999999999999999999
Q ss_pred ccCCCcccccccccc-cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 627 ISSYNLPLLAENAEK-VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 627 l~DfGl~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|+|||++........ .....++..|+|||......++.++||||||+++|||++|++||.......+...+.. ..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~---~~- 232 (279)
T 2w5a_A 157 LGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE---GK- 232 (279)
T ss_dssp ECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TC-
T ss_pred EecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh---cc-
Confidence 999999865543221 2234567789999999888899999999999999999999999987654333222211 10
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. +.+...+ ...+.+++.+||+.||++|||+.||++++|+.+
T Consensus 233 --~-----~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 233 --F-----RRIPYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp --C-----CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred --c-----ccCCccc----CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 0 0111112 235667888999999999999999999887543
No 170
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.7e-40 Score=363.17 Aligned_cols=257 Identities=12% Similarity=0.154 Sum_probs=193.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHH---HHHhcCCCCCcceeeeeeeecc--
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHI---ELISKLRHRHLVSALGHCFECY-- 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~---~~l~~l~H~NIv~l~g~~~~~~-- 546 (786)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ....+.|.+|+ +++++++|||||++++.+....
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45688889999999999999995 579999999997542 22347799999 5666678999999995443200
Q ss_pred ccCCC----------Cc-----eEEEEEecCCCCChhHHhhcCCC----CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCc
Q 003926 547 FDDSS----------VS-----RIFLIFEYVPNGTLRSWISEGHA----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGV 607 (786)
Q Consensus 547 ~~~~~----------~~-----~~~LV~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~i 607 (786)
+.+.+ .+ ..|+||||+ +|+|.+++..... ...++|..++.++.|+++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 00000 00 378999999 6899999975211 12355788899999999999999998 99
Q ss_pred cccCCCCCceeecCCCcccccCCCcccccccccccccccccccccCccccccC-----------CCCcccceeehhHHHH
Q 003926 608 FSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-----------KLEEKIDIYDFGLILL 676 (786)
Q Consensus 608 vHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----------~~t~ksDVwSfGvvl~ 676 (786)
+||||||+|||++.++.+||+|||+++.... ......+ ..|+|||.+... .++.++|||||||++|
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 9999999999999999999999999875432 2233455 889999998877 7999999999999999
Q ss_pred HHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 677 EIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 677 ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
||+||+.||........ ...+.. . ...++ ..+.+++.+||+.||++|||+.|+++|+||.
T Consensus 305 elltg~~Pf~~~~~~~~--------------~~~~~~-~-~~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 305 WIWCADLPITKDAALGG--------------SEWIFR-S-CKNIP----QPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp HHHHSSCCC------CC--------------SGGGGS-S-CCCCC----HHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred HHHHCCCCCcccccccc--------------hhhhhh-h-ccCCC----HHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence 99999999864322110 000000 0 01122 3566888899999999999999999999988
Q ss_pred HHh
Q 003926 757 AQV 759 (786)
Q Consensus 757 ~~~ 759 (786)
...
T Consensus 365 ~~~ 367 (377)
T 3byv_A 365 QLR 367 (377)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 171
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=343.42 Aligned_cols=256 Identities=18% Similarity=0.330 Sum_probs=198.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcE----EEEEEecccC-CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF----VAIRCLKMKK-CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
++|+..+.||+|+||.||+|+.. +++. ||+|.+.... ....+.|.+|++++++++||||++++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 88 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES------
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec------
Confidence 56888899999999999999954 4543 5778776443 3456789999999999999999999999874
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++|+||+++|+|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 89 --~~~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~Df 161 (327)
T 3lzb_A 89 --STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp --SSEEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCT
T ss_pred --CCceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccC
Confidence 23789999999999999997642 3589999999999999999999997 9999999999999999999999999
Q ss_pred Cccccccccccc---ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKV---GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~---~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++........ ....++..|+|||.+....++.++|||||||++|||++ |++||.......+...+... .
T Consensus 162 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~---~-- 236 (327)
T 3lzb_A 162 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---E-- 236 (327)
T ss_dssp TC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---C--
T ss_pred cceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC---C--
Confidence 999765332211 12234557999999988899999999999999999999 99999876555443332210 0
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
. ......+ ...+.+++.+||+.||++||++.|+++.+.......
T Consensus 237 --~----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 237 --R----LPQPPIC----TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp --C----CCCCTTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred --C----CCCCccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 0 0011112 234667888999999999999999999998665443
No 172
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.8e-39 Score=337.72 Aligned_cols=257 Identities=19% Similarity=0.335 Sum_probs=200.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecC----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~ 550 (786)
.++|...+.||+|+||.||+|+... +..||||.+..... ...+.|.+|++++++++||||+++++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE------ 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC------
Confidence 4567888999999999999998542 34699999876532 235679999999999999999999998753
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 --~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 157 (281)
T 3cc6_A 85 --EPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDF 157 (281)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCC
T ss_pred --CCCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCcc
Confidence 3468999999999999999753 23589999999999999999999997 9999999999999999999999999
Q ss_pred Ccccccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 631 NLPLLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 631 Gl~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
|++........ .....++..|+|||......++.++||||||+++|||+| |+.||...........+.. ...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~---~~~-- 232 (281)
T 3cc6_A 158 GLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDR-- 232 (281)
T ss_dssp CGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH---TCC--
T ss_pred CCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc---CCC--
Confidence 99865543221 122334567999999988889999999999999999998 9999875444333222211 100
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
+.....+ ...+.+++.+||+.||++|||+.|+++++....+..
T Consensus 233 ------~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 233 ------LPKPDLC----PPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp ------CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCC----CHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 0011112 234668888999999999999999999998665443
No 173
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-39 Score=349.48 Aligned_cols=270 Identities=16% Similarity=0.238 Sum_probs=198.9
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.+.|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++++++|||||++++++...... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-DDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST-TTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc-ccC
Confidence 35688889999999999999996 47999999998654322 246789999999999999999999988642110 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+||||+ +++|.+++.. ..+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 4579999999 7899999975 2589999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRS 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 710 (786)
++..... .....++..|+|||.+.. ..++.++||||+||++|||++|++||...+... +.................
T Consensus 175 a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 175 ARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred ccccccc--cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 8765432 233456788999998876 679999999999999999999999997654332 222222111110000000
Q ss_pred ---------------cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 ---------------MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ---------------~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... ..........+.+++.+||+.||++|||+.|+++|+||..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~ 313 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred hhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence 000000 0111122345778889999999999999999999999864
No 174
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=338.97 Aligned_cols=254 Identities=20% Similarity=0.349 Sum_probs=184.5
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccC---CCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 82 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED------- 82 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-------
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-------
Confidence 35688889999999999999996 579999999997542 2335779999999999999999999999865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg 157 (278)
T 3cok_A 83 SNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFG 157 (278)
T ss_dssp SSEEEEEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeec
Confidence 45689999999999999999863 24689999999999999999999998 99999999999999999999999999
Q ss_pred cccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++...... .......++..|+|||......++.++||||||+++|||++|++||.......... .. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~------~~-- 226 (278)
T 3cok_A 158 LATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---KV------VL-- 226 (278)
T ss_dssp TCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------C------CS--
T ss_pred ceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH---HH------hh--
Confidence 98654322 12223456778999999988889999999999999999999999997543221110 00 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+...+... ...+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 227 -~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 268 (278)
T 3cok_A 227 -ADYEMPSFL----SIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR 268 (278)
T ss_dssp -SCCCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred -cccCCcccc----CHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence 011111111 235668888999999999999999999988654
No 175
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.9e-39 Score=345.12 Aligned_cols=257 Identities=19% Similarity=0.317 Sum_probs=196.7
Q ss_pred CCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 478 NFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.|+..+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++++++||||+++++++... .
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~ 96 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED-----G 96 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----C
Confidence 467789999999999999984 3689999999985543 3457899999999999999999999998752 2
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccc
Confidence 355899999999999999996532 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH-----------HHH
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL-----------KNQ 696 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~-----------~~~ 696 (786)
++........ .....++..|+|||......++.++||||||+++|||+||+.|+........ ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 9866543321 1223455669999999888899999999999999999999988643211100 000
Q ss_pred HHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 697 LQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 697 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
+...... ...... +......+.+++.+||+.||++|||+.|+++.+..
T Consensus 252 ~~~~~~~-------~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 252 LVNTLKE-------GKRLPC----PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHHHHHT-------TCCCCC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhc-------cCCCCC----CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 0000000 000111 11222457788899999999999999999998863
No 176
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.1e-39 Score=375.57 Aligned_cols=255 Identities=20% Similarity=0.298 Sum_probs=208.7
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEeccc---CCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMK---KCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~ 549 (786)
..++|+..+.||+|+||.||+|+.+ +++.||||+++.. .....+.+..|..++..+ +||||+++++++..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~----- 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----- 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-----
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-----
Confidence 3567899999999999999999965 6899999999754 233456789999999988 79999999987754
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
.+..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +||||||||+|||+|.++.+||+|
T Consensus 414 --~~~~~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~D 485 (674)
T 3pfq_A 414 --MDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIAD 485 (674)
T ss_dssp --SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECC
T ss_pred --CCEEEEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEee
Confidence 46789999999999999999863 3589999999999999999999997 999999999999999999999999
Q ss_pred CCcccccc-cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc
Q 003926 630 YNLPLLAE-NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR 708 (786)
Q Consensus 630 fGl~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (786)
||+++... .........++..|+|||.+....|+.++|||||||++|||++|++||...+...+...+. ...
T Consensus 486 FGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~---~~~---- 558 (674)
T 3pfq_A 486 FGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM---EHN---- 558 (674)
T ss_dssp CTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---SSC----
T ss_pred cceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH---hCC----
Confidence 99987532 2233445678899999999988899999999999999999999999998765544332221 110
Q ss_pred cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHHHHHHHHH
Q 003926 709 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSV-----EDVLWNLQFAAQ 758 (786)
Q Consensus 709 ~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~-----~evl~~l~~~~~ 758 (786)
...+. ....++.+++.+||++||++||++ +||++|+||...
T Consensus 559 -----~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 559 -----VAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp -----CCCCT----TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred -----CCCCc----cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 01111 122356788889999999999998 999999998753
No 177
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.4e-38 Score=342.62 Aligned_cols=259 Identities=24% Similarity=0.392 Sum_probs=201.4
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcE--EEEEEecccC-CCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTF--VAIRCLKMKK-CHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~--vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|+.. +|.. ||||+++... ....+.|.+|+++++++ +||||+++++++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------- 97 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------- 97 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-------
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-------
Confidence 56788899999999999999964 5664 4999887532 23456799999999999 99999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCcee
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGH-------------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDIL 618 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 618 (786)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+. +|+||||||+||+
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl 174 (327)
T 1fvr_A 98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 174 (327)
T ss_dssp TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEE
Confidence 456899999999999999997642 123689999999999999999999997 9999999999999
Q ss_pred ecCCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHH
Q 003926 619 LDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 619 ld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 697 (786)
++.++.+||+|||+++............++..|+|||......++.++|||||||++|||+| |+.||...........+
T Consensus 175 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~ 254 (327)
T 1fvr_A 175 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254 (327)
T ss_dssp ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG
T ss_pred EcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHh
Confidence 99999999999999864433222233345567999999888889999999999999999998 99999765543322211
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
... ..+.....++ ..+.+++.+||+.||++|||+.|+++++......+
T Consensus 255 ----~~~-------~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 255 ----PQG-------YRLEKPLNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp ----GGT-------CCCCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ----hcC-------CCCCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 100 0011111122 35678888999999999999999999998655433
No 178
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5e-39 Score=339.35 Aligned_cols=255 Identities=20% Similarity=0.362 Sum_probs=205.9
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..++|+..+.||+|+||.||+|+.. ++..||||++.... ...+.|.+|++++++++||||+++++++.. .+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~~ 82 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------EP 82 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECS-------SS
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-------CC
Confidence 4567888899999999999999976 58899999997543 345789999999999999999999998864 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 158 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred CEEEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccc
Confidence 6899999999999999997642 34689999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccc--cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 634 LLAENAEK--VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
........ .....++..|+|||......++.++||||||+++|||++ |++||...........+.. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~---~------- 228 (288)
T 3kfa_A 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---D------- 228 (288)
T ss_dssp GTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT---T-------
T ss_pred eeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc---c-------
Confidence 76543221 122334567999999988899999999999999999999 9999977655443332211 0
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..+.....+ ...+.+++.+||+.||++|||+.|+++.+...
T Consensus 229 -~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 229 -YRMERPEGC----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp -CCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCCCCCCCC----CHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 001111112 23567888899999999999999999888643
No 179
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=9.5e-39 Score=337.71 Aligned_cols=256 Identities=23% Similarity=0.329 Sum_probs=198.7
Q ss_pred CCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
|...+.||+|+||.||+|... ++..||+|++...... ..+.|.+|++++++++||||+++++++.... ......
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV---KGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES---SSCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc---CCCceE
Confidence 556778999999999999864 6889999998765432 3467999999999999999999999886421 224568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccccCCCccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKISSYNLPL 634 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DfGl~~ 634 (786)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. .++|+||||||+||+++ .++.+||+|||++.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 9999999999999999753 3589999999999999999999997 12399999999999998 78999999999986
Q ss_pred ccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhcccccccccc
Q 003926 635 LAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
...... .....++..|+|||.+. +.++.++|||||||++|||++|+.||..... ......+ ... ...
T Consensus 181 ~~~~~~-~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---~~~-------~~~ 248 (290)
T 1t4h_A 181 LKRASF-AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TSG-------VKP 248 (290)
T ss_dssp GCCTTS-BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TTT-------CCC
T ss_pred cccccc-cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHH---hcc-------CCc
Confidence 543322 23345778899999775 5699999999999999999999999975332 2211111 000 001
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.......+ ..+.+++.+||+.||++|||+.|+++|+||.+
T Consensus 249 ~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 249 ASFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp GGGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred cccCCCCC----HHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 11111111 34678888999999999999999999998754
No 180
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.3e-39 Score=341.04 Aligned_cols=259 Identities=16% Similarity=0.248 Sum_probs=188.1
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||+++...... .+.+.++...++.++||||+++++++.. .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-------~ 78 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-------E 78 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------S
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-------c
Confidence 45688899999999999999996 479999999997653221 2334555566888999999999999875 3
Q ss_pred ceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||++ |+|.+++... .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 79 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 79 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp SSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred CCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecC
Confidence 56899999998 5888877531 1234699999999999999999999984 289999999999999999999999999
Q ss_pred cccccccccccccccccccccCcccc----ccCCCCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHHHHHHhcc
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNS----ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~----~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~ 705 (786)
++.............++..|+|||.+ ....++.++|||||||++|||+||+.||..... ...... ....
T Consensus 156 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~- 230 (290)
T 3fme_A 156 ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV----VEEP- 230 (290)
T ss_dssp --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH----HHSC-
T ss_pred CcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH----hccC-
Confidence 98765444333444677889999985 456789999999999999999999999975322 111111 1111
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~ 759 (786)
... ... ......+.+++.+||+.||++|||+.|+++|+||....
T Consensus 231 --~~~-----~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 231 --SPQ-----LPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp --CCC-----CCT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred --CCC-----ccc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 000 000 11123567888899999999999999999999998653
No 181
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2e-38 Score=341.36 Aligned_cols=262 Identities=23% Similarity=0.373 Sum_probs=201.9
Q ss_pred hcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
.++|...+.||+|+||.||+|+. .++..||||++..... ....+|.+|+.++++++||||+++++++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC----
Confidence 35688899999999999999984 2477999999974432 234679999999999999999999999865
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCC----CCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHA----HQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--- 621 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--- 621 (786)
....++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.
T Consensus 105 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~ 178 (327)
T 2yfx_A 105 ---SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 178 (327)
T ss_dssp ---SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSST
T ss_pred ---CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCC
Confidence 3457999999999999999986431 13589999999999999999999997 9999999999999994
Q ss_pred CCcccccCCCccccccccc---ccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHH
Q 003926 622 NLVAKISSYNLPLLAENAE---KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL 697 (786)
Q Consensus 622 ~~~~kl~DfGl~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~ 697 (786)
+..+||+|||++....... ......++..|+|||.+....++.++||||||+++|||+| |+.||...........+
T Consensus 179 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 258 (327)
T 2yfx_A 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258 (327)
T ss_dssp TCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred cceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH
Confidence 4569999999986443221 1223345678999999988889999999999999999998 99999765544332222
Q ss_pred HHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 003926 698 QAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 762 (786)
Q Consensus 698 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~ 762 (786)
.. .. . +.....++ ..+.+++.+||+.||++||++.||+++++.....+..
T Consensus 259 ~~---~~----~----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~ 308 (327)
T 2yfx_A 259 TS---GG----R----MDPPKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308 (327)
T ss_dssp HT---TC----C----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred hc---CC----C----CCCCCCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHH
Confidence 11 10 0 01111122 3566788899999999999999999999987664433
No 182
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-39 Score=346.18 Aligned_cols=260 Identities=20% Similarity=0.342 Sum_probs=182.9
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhc--CCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++.... .....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~---~~~~~ 75 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN---GTWTQ 75 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC---SSSEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC---Cccce
Confidence 56888999999999999999875 889999998643 35678889999988 79999999999987521 11236
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-----CCCccccCCCCCceeecCCCcccccC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||... ..+|+||||||+|||++.++.+||+|
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence 89999999999999999753 5788889999999999999999211 23999999999999999999999999
Q ss_pred CCccccccccccc-----ccccccccccCccccccC------CCCcccceeehhHHHHHHHhC----------CCCCCCc
Q 003926 630 YNLPLLAENAEKV-----GHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVG----------RPLKSRK 688 (786)
Q Consensus 630 fGl~~~~~~~~~~-----~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG----------~~p~~~~ 688 (786)
||+++........ ....++..|+|||.+... .++.++|||||||++|||+|| +.||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 9998655432221 223578899999988665 344689999999999999999 5555321
Q ss_pred hhH--HHHHHHHHHHHhccccccccccccccccC-cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 689 EVD--LLKNQLQAVVTADESARRSMVDPAVNKAC-LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 689 ~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
... ......... . .....+.....+ ..+....+.+++.+||+.||++|||+.||++.+.
T Consensus 232 ~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 293 (303)
T 3gxj_A 232 VPSDPSVEEMRKVV-C------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp CC-CCCCC-CHHHH-T------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred CCCCccHHHHHHHH-H------HhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 100 000000000 0 011112111111 2255667889999999999999999999999986
No 183
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.1e-38 Score=342.99 Aligned_cols=276 Identities=18% Similarity=0.286 Sum_probs=207.8
Q ss_pred HhcCCCccCccCCCCCceeEEEEe--cCCcEEEEEEecccCC--CChHHHHHHHHHHhcC---CCCCcceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL--KNGTFVAIRCLKMKKC--HSTRNFMHHIELISKL---RHRHLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l---~H~NIv~l~g~~~~~~~ 547 (786)
+.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+++++++ +||||++++++|.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456788999999999999999997 3688999999875432 2234677888887766 89999999999863211
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
......++||||++ |+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 89 --~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 --DRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp --SSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred --CCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 12456899999998 69999997642 23589999999999999999999997 9999999999999999999999
Q ss_pred cCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHH-HHHHHHHHHhccc
Q 003926 628 SSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVVTADES 706 (786)
Q Consensus 628 ~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~ 706 (786)
+|||++.............++..|+|||......++.++|||||||++|||++|++||........ ...+.........
T Consensus 162 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred ecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 999998765443334445677889999999888899999999999999999999999976544332 2222211111111
Q ss_pred cccccc-------c---ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 707 ARRSMV-------D---PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 707 ~~~~~~-------d---~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+.... . ..............+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 302 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence 110000 0 00000111122345668888999999999999999999998764
No 184
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.2e-39 Score=359.95 Aligned_cols=274 Identities=17% Similarity=0.230 Sum_probs=198.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++..... ...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDL--LKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT--TTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCC--CcC
Confidence 357888999999999999999964 6899999999754322 24679999999999999999999998865221 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...|+||||++ |+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 56899999997 5999999753 3589999999999999999999998 999999999999999999999999999
Q ss_pred cccccccc-----------------------ccccccccccccCcccc-ccCCCCcccceeehhHHHHHHHhCC------
Q 003926 633 PLLAENAE-----------------------KVGHVIPYSGSIDPTNS-ARGKLEEKIDIYDFGLILLEIIVGR------ 682 (786)
Q Consensus 633 ~~~~~~~~-----------------------~~~~~~~~~~~~aPe~~-~~~~~t~ksDVwSfGvvl~ElltG~------ 682 (786)
++...... ......++..|+|||.+ ....|+.++||||+||++|||++|.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~ 255 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSS
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccc
Confidence 97653221 12345678889999985 4566999999999999999999853
Q ss_pred -----CCCCCch------------------hHHHHHHHHHHHHhcccccccccc-----------cccc---ccCcHHHH
Q 003926 683 -----PLKSRKE------------------VDLLKNQLQAVVTADESARRSMVD-----------PAVN---KACLDESL 725 (786)
Q Consensus 683 -----~p~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~d-----------~~~~---~~~~~~~~ 725 (786)
++|.+.. .+.+...+.............+.. .... ........
T Consensus 256 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 335 (432)
T 3n9x_A 256 PTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSIS 335 (432)
T ss_dssp GGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSC
T ss_pred cccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCC
Confidence 4443221 111111111111100000000000 0000 00001123
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 726 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 726 ~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..+.+++.+||+.||++|||+.|+++|+||...
T Consensus 336 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 368 (432)
T 3n9x_A 336 DDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368 (432)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence 456788899999999999999999999998764
No 185
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.2e-39 Score=359.29 Aligned_cols=269 Identities=18% Similarity=0.244 Sum_probs=202.0
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcC------CCCCcceeeeeeeecccc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKL------RHRHLVSALGHCFECYFD 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l------~H~NIv~l~g~~~~~~~~ 548 (786)
..+|+..+.||+|+||+||+|+.. +++.||||+++... ...+++.+|+++++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~---- 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF---- 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc----
Confidence 346888999999999999999865 68999999997532 2245678888888876 57799999998875
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--cc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV--AK 626 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--~k 626 (786)
.+..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +|
T Consensus 171 ---~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vk 242 (429)
T 3kvw_A 171 ---RNHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242 (429)
T ss_dssp ---TTEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEE
T ss_pred ---CCeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceE
Confidence 457899999997 69999987643 24589999999999999999999997 9999999999999999887 99
Q ss_pred ccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 627 ISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 627 l~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+|||+++.... ......++..|+|||.+....|+.++|||||||++|||+||++||...........+.........
T Consensus 243 L~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~ 320 (429)
T 3kvw_A 243 VIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320 (429)
T ss_dssp ECCCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred EeecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 999999865432 223446778899999998888999999999999999999999999765543322222211111000
Q ss_pred cc-------ccccc--------------------------------ccccccC----cHHHHHHHHHHHHHhccCCCCCC
Q 003926 707 AR-------RSMVD--------------------------------PAVNKAC----LDESLKTMMEVCVRCLLKNPAER 743 (786)
Q Consensus 707 ~~-------~~~~d--------------------------------~~~~~~~----~~~~~~~~~~l~~~Cl~~dP~~R 743 (786)
.. ...++ +...... .......+.+++.+||+.||++|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~R 400 (429)
T 3kvw_A 321 KLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR 400 (429)
T ss_dssp HHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhC
Confidence 00 00000 0000000 00012457789999999999999
Q ss_pred CCHHHHHHHHHHHHHh
Q 003926 744 PSVEDVLWNLQFAAQV 759 (786)
Q Consensus 744 Pt~~evl~~l~~~~~~ 759 (786)
||+.|+++|+|+.+..
T Consensus 401 pta~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 401 MTPGQALRHPWLRRRL 416 (429)
T ss_dssp CCHHHHHTSTTTC---
T ss_pred CCHHHHhCChhhccCC
Confidence 9999999999987643
No 186
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.4e-38 Score=371.13 Aligned_cols=243 Identities=19% Similarity=0.292 Sum_probs=194.5
Q ss_pred CccCCCCCceeEEEEec---CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEE
Q 003926 483 AFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
+.||+|+||.||+|.+. +++.||||+++.... ...++|.+|+++|++++|||||+++|+|.. +..++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--------~~~~l 446 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--------ESWML 446 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--------SSEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--------CCEEE
Confidence 47999999999999753 468899999986543 235789999999999999999999998853 34789
Q ss_pred EEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 558 IFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
|||||++|+|.+++... ..+++..++.++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++...
T Consensus 447 v~E~~~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~ 520 (635)
T 4fl3_A 447 VMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520 (635)
T ss_dssp EEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred EEEccCCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence 99999999999999753 3589999999999999999999997 99999999999999999999999999997654
Q ss_pred cccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 638 NAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 638 ~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
.... .....++..|+|||.+....++.++|||||||++|||+| |+.||.......+...+.. . .
T Consensus 521 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~----~--~----- 589 (635)
T 4fl3_A 521 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----G--E----- 589 (635)
T ss_dssp C-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----T--C-----
T ss_pred cCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C--C-----
Confidence 3221 112234567999999988899999999999999999998 9999987655443332221 1 0
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
.+.....++ ..+.+++.+||+.||++||++.+|++.|.
T Consensus 590 ~~~~p~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 590 RMGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp CCCCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCCCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 011111222 45678888999999999999999999886
No 187
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.6e-38 Score=335.89 Aligned_cols=254 Identities=20% Similarity=0.355 Sum_probs=190.4
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||+||+|+... .||||+++..... ..+.|.+|++++++++||||+++++++.. +
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------~ 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--------P 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------S
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC--------C
Confidence 4568888999999999999998653 5999999765432 24679999999999999999999997642 4
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 167 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA 167 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--
T ss_pred ccEEEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceec
Confidence 579999999999999999753 24689999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc---cccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHhccc
Q 003926 634 LLAENA---EKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVVTADES 706 (786)
Q Consensus 634 ~~~~~~---~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 706 (786)
...... .......++..|+|||.+. ...++.++||||||+++|||++|+.||..... +.+...+.. ..
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~-- 242 (289)
T 3og7_A 168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR---GS-- 242 (289)
T ss_dssp ----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH---TS--
T ss_pred cccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc---cc--
Confidence 654321 1223345778899999875 56688999999999999999999999976432 222222211 10
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
..... +.....+ ...+.+++.+||+.||++|||+.|+++.++.
T Consensus 243 -~~~~~-~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 243 -LSPDL-SKVRSNC----PKRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp -CCCCT-TSSCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -cCcch-hhccccC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 00000 0111122 2457788889999999999999999999863
No 188
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=337.09 Aligned_cols=256 Identities=20% Similarity=0.336 Sum_probs=200.8
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..+.|+..+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|++++++++||||+++++++.. .+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK-------NT 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe-------CC
Confidence 3567888999999999999999975 58999999987543 45789999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ...+++..+..++.+++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 172 (314)
T 3com_A 98 DLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVA 172 (314)
T ss_dssp EEEEEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccc
Confidence 689999999999999998732 23689999999999999999999997 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
...... .......++..|+|||......++.++||||||+++|||++|+.||...........+ .... .....
T Consensus 173 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~---~~~~~ 246 (314)
T 3com_A 173 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI---PTNP---PPTFR 246 (314)
T ss_dssp EECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSC---CCCCS
T ss_pred hhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---hcCC---CcccC
Confidence 654332 1223345677899999998888999999999999999999999999765432221111 1110 00000
Q ss_pred cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 713 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 713 d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+ ..+ ...+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 247 ~~---~~~----~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~ 284 (314)
T 3com_A 247 KP---ELW----SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284 (314)
T ss_dssp SG---GGS----CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred Cc---ccC----CHHHHHHHHHHccCChhhCcCHHHHHhCHHHhc
Confidence 11 111 235678888999999999999999999999875
No 189
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-38 Score=342.79 Aligned_cols=255 Identities=18% Similarity=0.287 Sum_probs=197.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--------CChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
.++|...+.||+|+||.||+|+.. +++.||||++..... .....|.+|++++++++||||+++++++..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 86 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 86 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--
Confidence 356888999999999999999965 689999999875432 122458899999999999999999998753
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc--
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV-- 624 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-- 624 (786)
+..++||||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 87 ------~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~ 154 (322)
T 2ycf_A 87 ------EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDC 154 (322)
T ss_dssp ------SSEEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSC
T ss_pred ------CceEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCC
Confidence 2379999999999999998753 3689999999999999999999997 9999999999999987654
Q ss_pred -ccccCCCcccccccccccccccccccccCccccc---cCCCCcccceeehhHHHHHHHhCCCCCCCchhH-HHHHHHHH
Q 003926 625 -AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQA 699 (786)
Q Consensus 625 -~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~-~~~~~~~~ 699 (786)
+||+|||++.............++..|+|||.+. ...++.++|||||||++|||++|++||...... .+...+..
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 234 (322)
T 2ycf_A 155 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234 (322)
T ss_dssp CEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH
T ss_pred eEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh
Confidence 9999999987654433333445788899999863 466899999999999999999999999754321 22222111
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. . . ..+.... .....+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 235 ----~~--~-~-~~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~ 279 (322)
T 2ycf_A 235 ----GK--Y-N-FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279 (322)
T ss_dssp ----TC--C-C-CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC
T ss_pred ----Cc--c-c-cCchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcC
Confidence 00 0 0 0111111 1123567888999999999999999999998864
No 190
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.6e-39 Score=339.74 Aligned_cols=258 Identities=17% Similarity=0.312 Sum_probs=205.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC---------CChHHHHHHHHHHhcCC-CCCcceeeeeeee
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC---------HSTRNFMHHIELISKLR-HRHLVSALGHCFE 544 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---------~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~ 544 (786)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888999999999999999975 689999999975431 11356889999999996 9999999998864
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV 624 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 624 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 96 -------~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~ 162 (298)
T 1phk_A 96 -------NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMN 162 (298)
T ss_dssp -------SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred -------CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCc
Confidence 45789999999999999999753 3589999999999999999999997 9999999999999999999
Q ss_pred ccccCCCcccccccccccccccccccccCccccc------cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 625 AKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSA------RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 625 ~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~------~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
+||+|||++.............++..|+|||.+. ...++.++||||||+++|||++|+.||...........+.
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 242 (298)
T 1phk_A 163 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242 (298)
T ss_dssp EEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred EEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHh
Confidence 9999999987655444444456778899999874 4568899999999999999999999997654433222211
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .. .....+. .......+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 243 ~---~~----~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (298)
T 1phk_A 243 S---GN----YQFGSPE-----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290 (298)
T ss_dssp H---TC----CCCCTTT-----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred c---CC----cccCccc-----ccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence 1 11 0000111 11122356788889999999999999999999987643
No 191
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.1e-39 Score=335.08 Aligned_cols=256 Identities=19% Similarity=0.302 Sum_probs=201.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+ .+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-------GN 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------TT
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------CC
Confidence 356888899999999999999965 689999999975543 335679999999999999999999998875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+++|+|.+++... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 152 (276)
T 2yex_A 79 IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA 152 (276)
T ss_dssp EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCc
Confidence 689999999999999998753 3589999999999999999999997 9999999999999999999999999998
Q ss_pred ccccccc---ccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 634 LLAENAE---KVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 634 ~~~~~~~---~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
....... ......++..|+|||......+ +.++||||||+++|||++|+.||......... ........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~----- 225 (276)
T 2yex_A 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE--YSDWKEKK----- 225 (276)
T ss_dssp EECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH--HHHHHTTC-----
T ss_pred cccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH--HHHhhhcc-----
Confidence 6543221 1233456778999999876664 77999999999999999999999754322110 01110000
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
....+ .. .....+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 226 ~~~~~--~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (276)
T 2yex_A 226 TYLNP--WK----KIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267 (276)
T ss_dssp TTSTT--GG----GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred cccCc--hh----hcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccC
Confidence 00000 01 11234667888999999999999999998887543
No 192
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.8e-38 Score=339.38 Aligned_cols=264 Identities=17% Similarity=0.319 Sum_probs=195.8
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeecc
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECY 546 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~ 546 (786)
....++|...+.||+|+||.||+|+.. ++..||||+++..... ..+.|.+|++++++++||||+++++++....
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 334567888899999999999999854 3558999999765432 2367999999999999999999999987522
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcC---CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEG---HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL 623 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 623 (786)
. ......++||||+++|+|.+++... .....+++..++.++.|+++||.|||+. +|+||||||+||+++.++
T Consensus 110 ~--~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 110 S--QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTS
T ss_pred c--cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence 1 1123469999999999999998532 1234699999999999999999999997 999999999999999999
Q ss_pred cccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHH
Q 003926 624 VAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 624 ~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~ 699 (786)
.+||+|||++........ .....++..|+|||......++.++||||||+++|||++ |++||...........+.
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~- 263 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL- 263 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH-
Confidence 999999999865433211 122334567999999988889999999999999999999 889987654443322211
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
... . +.....+ ...+.+++.+||+.||++|||+.|+++++...
T Consensus 264 --~~~----~----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 264 --HGH----R----LKQPEDC----LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp --TTC----C----CCCBTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --cCC----C----CCCCccc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 100 0 1111112 23567888899999999999999999999744
No 193
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=353.05 Aligned_cols=265 Identities=18% Similarity=0.270 Sum_probs=185.8
Q ss_pred cCccCCCCCceeEEEEec---CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
+++||+|+||+||+|+.+ +++.||||++.... ....+.+|++++++++|||||++++++... .....++|
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~~~~lv 98 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH-----ADRKVWLL 98 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEET-----TTTEEEEE
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecC-----CCCeEEEE
Confidence 568999999999999965 57899999997543 346789999999999999999999998641 24578999
Q ss_pred EecCCCCChhHHhhcC------CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee----cCCCccccc
Q 003926 559 FEYVPNGTLRSWISEG------HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL----DQNLVAKIS 628 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~------~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~ 628 (786)
|||++ |+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99997 5888877521 1123589999999999999999999998 99999999999999 778999999
Q ss_pred CCCcccccccc----cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh----------HHH
Q 003926 629 SYNLPLLAENA----EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV----------DLL 693 (786)
Q Consensus 629 DfGl~~~~~~~----~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~----------~~~ 693 (786)
|||+++..... .......++..|+|||.+... .++.++|||||||++|||+||++||..... +.+
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 99999765432 122334678889999988764 589999999999999999999999965332 222
Q ss_pred HHHHHHHHHhcccccccccc------------ccccccCcH---------HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 003926 694 KNQLQAVVTADESARRSMVD------------PAVNKACLD---------ESLKTMMEVCVRCLLKNPAERPSVEDVLWN 752 (786)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~d------------~~~~~~~~~---------~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~ 752 (786)
...+..........+..+.. ......+.. .....+.+++.+||+.||++|||+.|+++|
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 22222211111111111000 000000000 002356788999999999999999999999
Q ss_pred HHHHH
Q 003926 753 LQFAA 757 (786)
Q Consensus 753 l~~~~ 757 (786)
+||..
T Consensus 335 p~f~~ 339 (405)
T 3rgf_A 335 PYFLE 339 (405)
T ss_dssp GGGTS
T ss_pred hhhcc
Confidence 99865
No 194
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.3e-38 Score=334.99 Aligned_cols=268 Identities=20% Similarity=0.303 Sum_probs=201.3
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|+..+.||+|+||.||+|+.+ +|+.||||+++.... ...+.+.+|++++++++||||+++++++.. .+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~~ 75 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------EN 75 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-------TT
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-------CC
Confidence 56888899999999999999965 689999999875432 234679999999999999999999999875 45
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~ 150 (299)
T 2r3i_A 76 KLYLVFEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150 (299)
T ss_dssp EEEEEEECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHH
T ss_pred ceEEEEEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhh
Confidence 6899999998 69999997642 24589999999999999999999998 9999999999999999999999999998
Q ss_pred cccccc-cccccccccccccCccccccCC-CCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhccccccc
Q 003926 634 LLAENA-EKVGHVIPYSGSIDPTNSARGK-LEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRS 710 (786)
Q Consensus 634 ~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 710 (786)
...... .......++..|+|||...... ++.++|||||||++|||+||+.||....... ...............+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 151 RAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230 (299)
T ss_dssp HHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred hhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhH
Confidence 654322 2223345677899999887654 7999999999999999999999997654432 222222111111000000
Q ss_pred -----cccccccc---cC----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 711 -----MVDPAVNK---AC----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 711 -----~~d~~~~~---~~----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
...+.... .. .......+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~ 288 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhh
Confidence 00011000 00 011224567888999999999999999999988865
No 195
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.4e-39 Score=340.06 Aligned_cols=267 Identities=18% Similarity=0.317 Sum_probs=186.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..++|...+.||+|+||.||+|+. .+++.||||++..... ...+++.+|++++++++||||+++++++.. .
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 85 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-------K 85 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-------S
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-------c
Confidence 356788999999999999999985 4689999999875542 335678999999999999999999998865 3
Q ss_pred ceEEEEEecCCCCChhHHhhcC-----CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-----HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-----~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 627 (786)
+..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEE
Confidence 5689999999999999998631 1234589999999999999999999997 9999999999999999999999
Q ss_pred cCCCccccccccc------ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHH
Q 003926 628 SSYNLPLLAENAE------KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV 700 (786)
Q Consensus 628 ~DfGl~~~~~~~~------~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~ 700 (786)
+|||++....... ......++..|+|||.... ..++.++||||||+++|||++|+.||........... .
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~ 239 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML---T 239 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH---H
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH---H
Confidence 9999986543221 1123356778999998765 4689999999999999999999999976543322111 1
Q ss_pred HHhccccc-cccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 701 VTADESAR-RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 701 ~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
........ ....++......+ ..+.+++.+||+.||++|||+.|+++|+||.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 240 LQNDPPSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp HTSSCCCTTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred hccCCCccccccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 11110000 0111111112222 356678889999999999999999999987653
No 196
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-38 Score=338.60 Aligned_cols=267 Identities=21% Similarity=0.335 Sum_probs=199.0
Q ss_pred HhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcC--CCCCcceeeeeeeeccccCCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL--RHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l--~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..++|+..+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++.... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~---~~~ 107 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT---GSW 107 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC---GGG
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC---CCC
Confidence 3467999999999999999999976 899999998643 245566777777665 9999999999987521 112
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC-----CCCccccCCCCCceeecCCCcccc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-----VPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~kl 627 (786)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 5789999999999999999753 5899999999999999999999852 348999999999999999999999
Q ss_pred cCCCccccccccccc-----ccccccccccCccccccCCCCcc------cceeehhHHHHHHHhC----------CCCCC
Q 003926 628 SSYNLPLLAENAEKV-----GHVIPYSGSIDPTNSARGKLEEK------IDIYDFGLILLEIIVG----------RPLKS 686 (786)
Q Consensus 628 ~DfGl~~~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~t~k------sDVwSfGvvl~ElltG----------~~p~~ 686 (786)
+|||+++........ ....++..|+|||.+....++.+ +|||||||++|||+|| +.|+.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 999998654322211 23457788999999877666655 9999999999999999 55654
Q ss_pred Cchh-HHHHHHHHHHHHhcccccccccccccccc-CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 687 RKEV-DLLKNQLQAVVTADESARRSMVDPAVNKA-CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 687 ~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.... .............. ...+..... ...+....+.+++.+||+.||++|||+.||+++|.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIK------KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTS------CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCCCchhhhHHHHhhh------ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 3211 00001111111110 111111111 123556678899999999999999999999999975543
No 197
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=334.67 Aligned_cols=251 Identities=17% Similarity=0.274 Sum_probs=199.2
Q ss_pred CCCccC-ccCCCCCceeEEEEec---CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 478 NFDTSA-FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 478 ~f~~~~-~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+|...+ .||+|+||.||+|+.. ++..||||+++.... ...+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 81 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-------- 81 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--------
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC--------
Confidence 344444 8999999999999853 578899999986532 235679999999999999999999998842
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~ 156 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGL 156 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTT
T ss_pred CCcEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccc
Confidence 3589999999999999999753 24689999999999999999999997 999999999999999999999999999
Q ss_pred ccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 633 PLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 633 ~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+........ .....++..|+|||......++.++||||||+++|||+| |+.||...........+.. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~---~~--- 230 (287)
T 1u59_A 157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ---GK--- 230 (287)
T ss_dssp CEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT---TC---
T ss_pred eeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc---CC---
Confidence 865532221 112234567999999888889999999999999999999 9999976554333222211 00
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. +.....+ ...+.+++.+||+.||++||++.|++++++..
T Consensus 231 -~----~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 231 -R----MECPPEC----PPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp -C----CCCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred -c----CCCCCCc----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 1111122 23567888899999999999999999999744
No 198
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.5e-39 Score=347.71 Aligned_cols=261 Identities=16% Similarity=0.287 Sum_probs=201.3
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC-ChHHHHHHHHH-HhcCCCCCcceeeeeeeeccccCCC
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH-STRNFMHHIEL-ISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-~~~~f~~E~~~-l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..++|+..+.||+|+||.||+|+. .+|+.||||+++..... ...++..|+.+ ++.++||||+++++++..
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~------- 121 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR------- 121 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-------
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-------
Confidence 456788889999999999999996 57999999999765332 23456666665 788999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+..++||||+++ +|.+++... .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+||
T Consensus 122 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Df 198 (340)
T 3an0_A 122 EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDF 198 (340)
T ss_dssp SSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCC
T ss_pred CCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeC
Confidence 3568999999985 999888631 1234699999999999999999999973 28999999999999999999999999
Q ss_pred CcccccccccccccccccccccCccccc----cCCCCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHHHHHHhc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSA----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVVTAD 704 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~~~~~~~ 704 (786)
|++.............++..|+|||.+. ...++.++|||||||++|||+||+.||..... ..+.. .....
T Consensus 199 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~----~~~~~ 274 (340)
T 3an0_A 199 GISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ----VVEEP 274 (340)
T ss_dssp SHHHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH----HHHSC
T ss_pred CCceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHH----HhcCC
Confidence 9987654333333346788899999864 34689999999999999999999999975321 11111 11111
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
. +.... ......+.+++.+||+.||++|||+.||++|+||.....
T Consensus 275 ---~-----~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 319 (340)
T 3an0_A 275 ---S-----PQLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 319 (340)
T ss_dssp ---C-----CCCCG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTT
T ss_pred ---C-----CCCCc---ccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccccc
Confidence 0 11110 111235678888999999999999999999999986533
No 199
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.3e-39 Score=338.17 Aligned_cols=252 Identities=17% Similarity=0.239 Sum_probs=197.6
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|+..+.||+|+||.||+|+.. +++.||||+++..... ...++.+|+..+.++ +||||+++++++.+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~------- 82 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE------- 82 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-------
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-------
Confidence 466888999999999999999975 7999999999865332 346789999999999 99999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCC-CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---------
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGH-AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ--------- 621 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--------- 621 (786)
.+..++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~ 159 (289)
T 1x8b_A 83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASE 159 (289)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------
T ss_pred CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccc
Confidence 457899999999999999997531 114589999999999999999999997 9999999999999984
Q ss_pred ----------CCcccccCCCcccccccccccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCchh
Q 003926 622 ----------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRKEV 690 (786)
Q Consensus 622 ----------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~~~ 690 (786)
...+||+|||.+....... ...++..|+|||.+... .++.++|||||||++|||++|++++.....
T Consensus 160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 236 (289)
T 1x8b_A 160 EGDEDDWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236 (289)
T ss_dssp ----------CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH
T ss_pred ccccccccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH
Confidence 4478999999986554322 23467889999988665 567899999999999999999987654322
Q ss_pred HHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 691 DLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .. .... .. +.....++ ..+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 237 ~--~~----~~~~---~~-----~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 237 W--HE----IRQG---RL-----PRIPQVLS----QEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp H--HH----HHTT---CC-----CCCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred H--HH----HHcC---CC-----CCCCcccC----HHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 1 11 1110 01 11111222 356678889999999999999999999987653
No 200
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.4e-38 Score=340.54 Aligned_cols=266 Identities=21% Similarity=0.339 Sum_probs=206.6
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEe------cCCcEEEEEEecccCCC-ChHHHHHHHHHHhcC-CCCCcceee
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRL------KNGTFVAIRCLKMKKCH-STRNFMHHIELISKL-RHRHLVSAL 539 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l-~H~NIv~l~ 539 (786)
...++....++|...+.||+|+||.||+|+. .+++.||||+++..... ..+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3445555567899999999999999999984 24689999999765432 245799999999999 799999999
Q ss_pred eeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHhhhhhcCCCCC
Q 003926 540 GHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHA-------------HQSLTWTQRISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 540 g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ 606 (786)
+++... ....++||||+++|+|.+++..... ...+++..+..++.|+++||.|||+. +
T Consensus 98 ~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ 168 (316)
T 2xir_A 98 GACTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---K 168 (316)
T ss_dssp EEECCT------TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred EEEecC------CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 988641 3458999999999999999986432 12388999999999999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GR 682 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~ 682 (786)
|+||||||+||+++.++.+||+|||+++....... .....++..|+|||.+....++.++|||||||++|||+| |+
T Consensus 169 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred cccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999865432221 123345667999999988889999999999999999998 99
Q ss_pred CCCCCchhH-HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 683 PLKSRKEVD-LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 683 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.||...... .....+. ... . +...... ...+.+++.+||+.||++|||+.||++++....
T Consensus 249 ~p~~~~~~~~~~~~~~~---~~~---~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 249 SPYPGVKIDEEFCRRLK---EGT---R-----MRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CSSTTCCCSHHHHHHHH---HTC---C-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccchhHHHHHHhc---cCc---c-----CCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 998764322 2211111 110 0 0111111 235677888999999999999999999997543
No 201
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=343.41 Aligned_cols=261 Identities=11% Similarity=0.088 Sum_probs=193.3
Q ss_pred cCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCC-----------ChHHHHHHHHHHhcCCCCCcceeeee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-----------STRNFMHHIELISKLRHRHLVSALGH 541 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~NIv~l~g~ 541 (786)
++|...+.||+|+||.||+|+.. ++..||||++...... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999975 5789999998754321 12357789999999999999999999
Q ss_pred eeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC
Q 003926 542 CFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ 621 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 621 (786)
+.... ......++||||+ +|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 117 ~~~~~---~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 117 GLTEF---KGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEES---SSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEES
T ss_pred ccccc---CCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEcc
Confidence 87522 2245789999999 999999997532 689999999999999999999997 9999999999999998
Q ss_pred CC--cccccCCCcccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch--
Q 003926 622 NL--VAKISSYNLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE-- 689 (786)
Q Consensus 622 ~~--~~kl~DfGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~-- 689 (786)
++ .+||+|||+++....... .....++..|+|||......++.++|||||||++|||+||+.||....
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 87 999999999965532211 123457788999999988889999999999999999999999995422
Q ss_pred hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
................ ......... ......+.+++.+||+.||++||++.||++.++
T Consensus 267 ~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 267 PVAVQTAKTNLLDELP----QSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHHHHHHHHHHHTTT----HHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred cHHHHHHHHhhccccc----HHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 1111111111111110 000000000 012235678888999999999999999999885
No 202
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.9e-39 Score=348.06 Aligned_cols=269 Identities=17% Similarity=0.233 Sum_probs=204.6
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCCh-----------------HHHHHHHHHHhcCCCCCccee
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHST-----------------RNFMHHIELISKLRHRHLVSA 538 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~-----------------~~f~~E~~~l~~l~H~NIv~l 538 (786)
.++|...+.||+|+||.||+|+. +|+.||||++........ +.|.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788899999999999999999 899999999975432211 789999999999999999999
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhHH------hhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc-CCCCCccccC
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRSW------ISEGHAHQSLTWTQRISAAIGVAKGIQFLHT-GIVPGVFSNN 611 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~------l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~~ivHrd 611 (786)
++++.. .+..++||||+++|+|.++ +... ....+++..+..++.|++.||.|||+ . +|+|||
T Consensus 109 ~~~~~~-------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~d 177 (348)
T 2pml_X 109 EGIITN-------YDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRD 177 (348)
T ss_dssp SEEEES-------SSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCC
T ss_pred EEEEee-------CCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecC
Confidence 999875 4578999999999999999 5432 13579999999999999999999998 6 999999
Q ss_pred CCCCceeecCCCcccccCCCcccccccccccccccccccccCccccccC-CCCc-ccceeehhHHHHHHHhCCCCCCCch
Q 003926 612 LKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARG-KLEE-KIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 612 lk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~t~-ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
|||+||+++.++.+||+|||++...... ......++..|+|||..... .++. ++||||||+++|||++|++||....
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CChHhEEEcCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999998655332 23344577889999998776 5666 9999999999999999999997644
Q ss_pred h-HHHHHHHHHHHHhcccccccccccccc---ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 690 V-DLLKNQLQAVVTADESARRSMVDPAVN---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 690 ~-~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. ......+................+... ..........+.+++.+||+.||.+|||+.|+++|+||..
T Consensus 257 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 328 (348)
T 2pml_X 257 SLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328 (348)
T ss_dssp CSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred cHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence 3 222221110000000000000000000 0000122345678889999999999999999999998765
No 203
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=341.10 Aligned_cols=273 Identities=16% Similarity=0.265 Sum_probs=196.6
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccc-------c
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYF-------D 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~-------~ 548 (786)
++|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++..... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 46778899999999999999976 589999999876554445789999999999999999999998743210 0
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CCCcccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QNLVAKI 627 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl 627 (786)
.......++||||++ |+|.+++.. ..+++.....++.|+++||+|||+. +|+||||||+||+++ +++.+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEE
Confidence 012457899999998 699999964 3588999999999999999999997 999999999999997 5679999
Q ss_pred cCCCccccccccc----ccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHH
Q 003926 628 SSYNLPLLAENAE----KVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVT 702 (786)
Q Consensus 628 ~DfGl~~~~~~~~----~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (786)
+|||+++...... ......++..|+|||.... ..++.++|||||||++|||+||+.||...........+.....
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 242 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSC
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 9999987553221 1223345678999998755 6789999999999999999999999976543322221111100
Q ss_pred hc-cccccc------------ccccccc-ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 703 AD-ESARRS------------MVDPAVN-KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 703 ~~-~~~~~~------------~~d~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. .....+ ...+... ..........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence 00 000000 0000000 0000112345778889999999999999999999999874
No 204
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5e-38 Score=331.69 Aligned_cols=257 Identities=18% Similarity=0.266 Sum_probs=204.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.. .
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------~ 93 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-------S 93 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------S
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-------C
Confidence 356888999999999999999975 689999999875432 346789999999999999999999999865 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC---CcccccC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN---LVAKISS 629 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~D 629 (786)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~D 167 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIID 167 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred CeEEEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEec
Confidence 5689999999999999988753 3589999999999999999999997 99999999999999764 4699999
Q ss_pred CCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 630 YNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 630 fGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
||++.............++..|+|||.... .++.++||||||+++|||++|++||...........+.. .. .
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~---~- 239 (287)
T 2wei_A 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET---GK---Y- 239 (287)
T ss_dssp TTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CC---C-
T ss_pred cCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---CC---C-
Confidence 999876544333334456778999998754 589999999999999999999999976554433222211 10 0
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .+....... ...+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 240 ~-~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 240 A-FDLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp C-CCSGGGTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred C-CCchhhhhc----CHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 0 000000111 2356788889999999999999999999998764
No 205
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.7e-38 Score=347.29 Aligned_cols=273 Identities=16% Similarity=0.258 Sum_probs=205.2
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++..... ....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI--EQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST--TTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCc--cccc
Confidence 356888999999999999999864 6889999999754322 23679999999999999999999998865321 1234
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6899999998 5999999753 589999999999999999999998 9999999999999999999999999998
Q ss_pred cccccccc----cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-ccc
Q 003926 634 LLAENAEK----VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESA 707 (786)
Q Consensus 634 ~~~~~~~~----~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~ 707 (786)
........ .....++..|+|||.+.. ..++.++|||||||++|||++|++||...........+....... ...
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 75543221 123467888999998654 458999999999999999999999997654433322222111110 000
Q ss_pred cccc------------cccc-c-cccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSM------------VDPA-V-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~------------~d~~-~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.... ..+. . ...........+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence 0000 0000 0 000001122457788999999999999999999999998754
No 206
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8.4e-38 Score=333.80 Aligned_cols=264 Identities=15% Similarity=0.254 Sum_probs=193.3
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC---ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH---STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
++|...+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|++++++++||||+++++++.. .
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------~ 104 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------D 104 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------T
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------C
Confidence 4688899999999999999996 47999999999764332 24578999999999999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
+..++||||+++|+|.+++... .....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg 181 (310)
T 2wqm_A 105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 181 (310)
T ss_dssp TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEecc
Confidence 5689999999999999998642 1234689999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc-ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 632 LPLLAENAE-KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 632 l~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
++....... ......++..|+|||......++.++||||||+++|||++|+.||....... .......... ....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~---~~~~ 257 (310)
T 2wqm_A 182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQC---DYPP 257 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH-HHHHHHHHTT---CSCC
T ss_pred ceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH-HHHHHHhhcc---cCCC
Confidence 986543322 1223456778999999988889999999999999999999999986532211 1111111110 0111
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhhcc
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHS 765 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~~~~~~ 765 (786)
. ....+ ...+.+++.+||+.||++|||+.||++++. ++++.+.+
T Consensus 258 ~----~~~~~----~~~l~~li~~~l~~dp~~Rps~~~il~~l~---~l~~~~~~ 301 (310)
T 2wqm_A 258 L----PSDHY----SEELRQLVNMCINPDPEKRPDVTYVYDVAK---RMHACTAS 301 (310)
T ss_dssp C----CTTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH---HHHHHHC-
T ss_pred C----ccccc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHH---HHHHhhhh
Confidence 0 01111 235667888999999999999999999886 34444443
No 207
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.6e-38 Score=334.65 Aligned_cols=254 Identities=20% Similarity=0.358 Sum_probs=201.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC-----
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD----- 549 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~----- 549 (786)
..+|+..+.||+|+||.||+|+.. +|+.||||+++... +.+.+|++++++++||||+++++++....+..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 346888899999999999999975 79999999987543 45789999999999999999999875421110
Q ss_pred ----CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 550 ----SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 550 ----~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
......++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 11345799999999999999997532 24689999999999999999999997 99999999999999999999
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||++.............++..|+|||......++.++||||||+++|||++|..|+.... ...... ..
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~~~-~~-- 233 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-----KFFTDL-RD-- 233 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----HHHHHH-HT--
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----HHHHHh-hc--
Confidence 9999999876544433344557788999999988889999999999999999999998764211 111110 00
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... ...+ ..+.+++.+||+.||++|||+.|++++++..+
T Consensus 234 ----~~~~----~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 234 ----GIIS----DIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp ----TCCC----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred ----cccc----ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 0011 1111 24567888999999999999999999998654
No 208
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.1e-38 Score=334.25 Aligned_cols=253 Identities=14% Similarity=0.252 Sum_probs=193.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
.++|...+.||+|+||.||+|+.. +++.||||++....... .+.|.+|++++++++||||+++++++..
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~------- 105 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI------- 105 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-------
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-------
Confidence 467889999999999999999965 68999999997654322 3678999999999999999999999875
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg 179 (309)
T 2h34_A 106 DGQLYVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFG 179 (309)
T ss_dssp TTEEEEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCC
T ss_pred CCeEEEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCc
Confidence 45689999999999999999753 3589999999999999999999997 99999999999999999999999999
Q ss_pred ccccccccc--ccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccc
Q 003926 632 LPLLAENAE--KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARR 709 (786)
Q Consensus 632 l~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (786)
++....... ......++..|+|||......++.++||||||+++|||++|+.||...........+ .... ...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~-~~~ 254 (309)
T 2h34_A 180 IASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI----NQAI-PRP 254 (309)
T ss_dssp C----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH----HSCC-CCG
T ss_pred cCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh----ccCC-CCc
Confidence 986553321 122345677899999998888999999999999999999999999876543222111 1110 000
Q ss_pred ccccccccccCcHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHH
Q 003926 710 SMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQ 754 (786)
Q Consensus 710 ~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-t~~evl~~l~ 754 (786)
. .....+ ...+.+++.+||+.||++|| +++++++.++
T Consensus 255 ~----~~~~~~----~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 255 S----TVRPGI----PVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp G----GTSTTC----CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred c----ccCCCC----CHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 0 111111 23466788899999999999 9999998886
No 209
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.1e-38 Score=344.18 Aligned_cols=259 Identities=21% Similarity=0.318 Sum_probs=201.7
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec-CC-----cEEEEEEecccCC-CChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK-NG-----TFVAIRCLKMKKC-HSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g-----~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
...++|...+.||+|+||.||+|+.. ++ ..||||.++.... ...+.+.+|+++++++ +||||++++++|..
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH- 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-
Confidence 34577888999999999999999964 23 4899999976543 2346799999999999 89999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCC
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGH-----------AHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKI 614 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~ 614 (786)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||
T Consensus 122 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 192 (333)
T 2i1m_A 122 ------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192 (333)
T ss_dssp ------SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred ------CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCccc
Confidence 356899999999999999987421 123589999999999999999999997 999999999
Q ss_pred CceeecCCCcccccCCCcccccccccc---cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchh
Q 003926 615 TDILLDQNLVAKISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEV 690 (786)
Q Consensus 615 ~NILld~~~~~kl~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~ 690 (786)
+||+++.++.+||+|||++........ .....++..|+|||......++.++|||||||++|||+| |++||.....
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 272 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred ceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch
Confidence 999999999999999999865432221 122334567999999888889999999999999999999 9999876432
Q ss_pred H-HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 691 D-LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 691 ~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .....+.. . . . +.....+ ...+.+++.+||+.||++|||+.||+++++...
T Consensus 273 ~~~~~~~~~~----~---~-~---~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 273 NSKFYKLVKD----G---Y-Q---MAQPAFA----PKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp SHHHHHHHHH----T---C-C---CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHhc----C---C-C---CCCCCCC----CHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 2 12111111 1 0 0 0011111 235677888999999999999999999997543
No 210
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-38 Score=334.10 Aligned_cols=252 Identities=21% Similarity=0.381 Sum_probs=195.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCceE
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.++|+..+.||+|+||.||+|... |+.||||+++... ..+.|.+|++++++++||||+++++++.+. .+..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~ 90 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------KGGL 90 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--------CC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------CCce
Confidence 456788899999999999999875 8899999987543 457899999999999999999999987541 2457
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcccc
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~ 166 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred EEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccc
Confidence 99999999999999997531 12378999999999999999999997 999999999999999999999999999865
Q ss_pred cccccccccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhccccccccccc
Q 003926 636 AENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADESARRSMVDP 714 (786)
Q Consensus 636 ~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 714 (786)
..... ....++..|+|||......++.++||||||+++|||+| |++||...........+. .. ..+
T Consensus 167 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~---~~--------~~~ 233 (278)
T 1byg_A 167 ASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE---KG--------YKM 233 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT---TT--------CCC
T ss_pred ccccc--cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh---cC--------CCC
Confidence 43322 22245667999999988889999999999999999998 999997655443322211 00 011
Q ss_pred cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 715 AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 715 ~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.....+ ...+.+++.+||+.||++|||+.|+++.+....
T Consensus 234 ~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 234 DAPDGC----PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcccC----CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 111122 235667888999999999999999999987554
No 211
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=342.75 Aligned_cols=270 Identities=19% Similarity=0.331 Sum_probs=203.8
Q ss_pred CHHHHHHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeec
Q 003926 468 SLEELEEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFEC 545 (786)
Q Consensus 468 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~ 545 (786)
++.++....++|+..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3344445677899999999999999999996 478999999987543 3457899999999999 899999999998752
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcc
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVA 625 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 625 (786)
... ...+..++||||+++|+|.+++.... ...+++.....++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 94 ~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 94 NPP-GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp C---CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred cCc-cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 211 11357899999999999999997532 24689999999999999999999997 99999999999999999999
Q ss_pred cccCCCccccccccc-ccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHH
Q 003926 626 KISSYNLPLLAENAE-KVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA 699 (786)
Q Consensus 626 kl~DfGl~~~~~~~~-~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~ 699 (786)
||+|||++....... ......++..|+|||.+. ...++.++|||||||++|||++|++||...........+
T Consensus 169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-- 246 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-- 246 (326)
T ss_dssp EECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH--
T ss_pred EEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh--
Confidence 999999986543221 223345678899999876 456899999999999999999999999765433221111
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... ...... ..++ ..+.+++.+||+.||++||++.|+++|+|+..
T Consensus 247 -~~~~---~~~~~~----~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~ 292 (326)
T 2x7f_A 247 -PRNP---APRLKS----KKWS----KKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292 (326)
T ss_dssp -HHSC---CCCCSC----SCSC----HHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred -hcCc---cccCCc----cccC----HHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence 1110 111111 1112 35667888999999999999999999999875
No 212
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.6e-39 Score=354.65 Aligned_cols=268 Identities=7% Similarity=-0.025 Sum_probs=183.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC---ChHHHHHHH---HHHhcCCCCCcceeeeeee---ecc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH---STRNFMHHI---ELISKLRHRHLVSALGHCF---ECY 546 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~f~~E~---~~l~~l~H~NIv~l~g~~~---~~~ 546 (786)
.+|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+ ++++. +|||||+++..+. +..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 44778899999999999999965 7999999999875432 235577784 55555 7999888553221 100
Q ss_pred ccCC--------------CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHH------HHHHHHHHHHhhhhhcCCCCC
Q 003926 547 FDDS--------------SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQR------ISAAIGVAKGIQFLHTGIVPG 606 (786)
Q Consensus 547 ~~~~--------------~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~------~~ia~~ia~gL~yLH~~~~~~ 606 (786)
.... .....|+|||||+ |+|.+++.... ..+.+..+ ..++.|+++||+|||+. +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 0000 0145899999999 89999997531 13455556 78889999999999997 9
Q ss_pred ccccCCCCCceeecCCCcccccCCCcccccccccccccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCC
Q 003926 607 VFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPL 684 (786)
Q Consensus 607 ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p 684 (786)
|+||||||+|||++.++.+||+|||+++...... ....++..|+|||.+.. ..++.++|||||||++|||+||+.|
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG--PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE--EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCCc--cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999997554322 13344588999999876 6799999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 685 KSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
|..........+ ........................+.+++.+||+.||++|||+.|+++|+||.+...
T Consensus 293 f~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 293 FGLVTPGIKGSW-------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp TTBCCTTCTTCC-------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred CCCcCcccccch-------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence 976432110000 000000000000000001122345678888999999999999999999999987533
No 213
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4e-38 Score=345.05 Aligned_cols=271 Identities=15% Similarity=0.232 Sum_probs=200.1
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++...... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-RNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS-TTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc-ccc
Confidence 356788899999999999999864 6999999999764332 246789999999999999999999998652110 111
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
...++||||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 23499999998 689888743 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccc-cc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESAR-RS 710 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 710 (786)
++..... .....++..|+|||.+.. ..++.++|||||||++|||++|++||...........+........... ..
T Consensus 191 a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 191 ARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp C----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred ccccccC--cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 8755332 233456788999998876 6799999999999999999999999987554332222211111100000 00
Q ss_pred ccc----------ccccc----cCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVD----------PAVNK----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d----------~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
+.+ +.... .........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 000 00000 0001123467788999999999999999999999998653
No 214
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=343.13 Aligned_cols=261 Identities=16% Similarity=0.199 Sum_probs=187.4
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeecccc-CCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFD-DSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~-~~~~ 552 (786)
..+|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++ |||||++++++...... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 346788899999999999999964 78999999986554444567999999999996 99999999998542221 1234
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCC--ccccCCCCCceeecCCCcccccCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPG--VFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~--ivHrdlk~~NILld~~~~~kl~Df 630 (786)
...++||||++ |+|.+++........+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 56899999996 79999886532334699999999999999999999996 6 999999999999999999999999
Q ss_pred Cccccccccccc-------------ccccccccccCcccc---ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 631 NLPLLAENAEKV-------------GHVIPYSGSIDPTNS---ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 631 Gl~~~~~~~~~~-------------~~~~~~~~~~aPe~~---~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
|+++........ ....++..|+|||.+ ....++.++|||||||++|||+||+.||........
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~- 261 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI- 261 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-
Confidence 998655332111 123467789999987 456789999999999999999999999965432111
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.... .. ... ....+ ..+.+++.+||+.||++|||+.|++++++....
T Consensus 262 --~~~~-------~~-~~~---~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 262 --VNGK-------YS-IPP---HDTQY----TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -------------CC-CCT---TCCSS----GGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --hcCc-------cc-CCc---ccccc----hHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000 00 000 01111 235578889999999999999999999986654
No 215
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=8.8e-39 Score=349.18 Aligned_cols=270 Identities=16% Similarity=0.239 Sum_probs=187.4
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++++++||||+++++++...... ....
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~-~~~~ 107 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL-EEFN 107 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc-ccCC
Confidence 5688889999999999999985 57999999998754322 346788999999999999999999988642110 1124
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+|+||+ +++|.+++.. ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 579999999 6899998864 3589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHH-HHHHHHHHHHhcccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVVTADESARRSM 711 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 711 (786)
+..... .....++..|+|||.+.. ..++.++|||||||++|||++|++||...+... +.................+
T Consensus 180 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 257 (367)
T 2fst_X 180 RHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred cccccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 654322 233457788999998866 679999999999999999999999997655432 2222221111110000000
Q ss_pred ccc----------cccccC----cHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 712 VDP----------AVNKAC----LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 712 ~d~----------~~~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ...... .......+.+++.+||+.||++|||+.|+++|+||..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~ 317 (367)
T 2fst_X 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317 (367)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhh
Confidence 000 000000 0011245678889999999999999999999999765
No 216
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=344.05 Aligned_cols=260 Identities=19% Similarity=0.362 Sum_probs=200.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-----cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-----KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
++|+..+.||+|+||.||+|++ .+|+.||||++........+.|.+|++++++++||||+++++++... .
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 115 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-----G 115 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec-----C
Confidence 4577889999999999999984 36899999999875544567899999999999999999999987642 1
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
....++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 345799999999999999998642 3589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH------------H
Q 003926 632 LPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK------------N 695 (786)
Q Consensus 632 l~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~------------~ 695 (786)
++........ .....++..|+|||......++.++||||||+++|||+||+.|+......... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 9876543221 11223445699999988888999999999999999999999887543211100 0
Q ss_pred HHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 696 QLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 696 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.+....... ..+.....+ ...+.+++.+||+.||++|||+.||++.+....
T Consensus 271 ~~~~~~~~~-------~~~~~~~~~----~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 271 HLIELLKNN-------GRLPRPDGC----PDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHHTT-------CCCCCCTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhhcC-------CCCCCCCcc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 000000000 001111122 245678888999999999999999999987543
No 217
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=7.1e-38 Score=331.82 Aligned_cols=256 Identities=12% Similarity=0.131 Sum_probs=200.8
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|++++++++|++++..++++.. ..+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~------~~~~ 79 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA------EGDY 79 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEE------ETTE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccC------CCCc
Confidence 45788899999999999999996 579999999986543 34568999999999999998888877754 1456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DfG 631 (786)
.++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 153 (296)
T 3uzp_A 80 NVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCT
T ss_pred eEEEEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCC
Confidence 89999999 899999997432 3689999999999999999999998 99999999999999 588899999999
Q ss_pred cccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh----HHHHHHHHH
Q 003926 632 LPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQA 699 (786)
Q Consensus 632 l~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~----~~~~~~~~~ 699 (786)
++........ .....++..|+|||......++.++|||||||++|||++|+.||..... .........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 3uzp_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred CcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccc
Confidence 9865543221 1334577889999999888899999999999999999999999875321 111111111
Q ss_pred HHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 700 VVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 700 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
..... .+.....++ ..+.+++.+||+.||++|||+.||++.+....
T Consensus 234 ~~~~~--------~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 234 KMSTP--------IEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHSC--------HHHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred ccCCc--------hHHHHhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 11110 000111122 35678888999999999999999999887443
No 218
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.3e-38 Score=332.23 Aligned_cols=254 Identities=20% Similarity=0.360 Sum_probs=197.0
Q ss_pred cCCCccCccCCCCCceeEEEEecC----CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN----GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..|+..+.||+|+||.||+|+..+ +..||||.++.... ...+.|.+|++++++++||||++++++|.. .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~ 98 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR------S 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC------S
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc------C
Confidence 346778999999999999998642 34689999875433 234679999999999999999999998764 1
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 173 (298)
T 3f66_A 99 EGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFG 173 (298)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCG
T ss_pred CCceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccc
Confidence 34679999999999999999753 24589999999999999999999997 99999999999999999999999999
Q ss_pred cccccccccc-----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 632 LPLLAENAEK-----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 632 l~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
+++....... .....++..|+|||......++.++||||||+++|||++ |.+|+...........+. ...
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~---~~~- 249 (298)
T 3f66_A 174 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---QGR- 249 (298)
T ss_dssp GGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH---TTC-
T ss_pred ccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh---cCC-
Confidence 9865533221 122334567999999988899999999999999999999 567776544333222111 100
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
....+ ..++ ..+.+++.+||+.||++|||+.|+++.+...
T Consensus 250 ----~~~~~---~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 250 ----RLLQP---EYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp ----CCCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCC---ccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00111 1122 3567888899999999999999999998743
No 219
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.2e-38 Score=335.08 Aligned_cols=250 Identities=18% Similarity=0.287 Sum_probs=196.3
Q ss_pred hcCCCccC-ccCCCCCceeEEEEec---CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 476 TNNFDTSA-FMGEGSQGQMYRGRLK---NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 476 ~~~f~~~~-~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
.++|...+ .||+|+||.||+|... +++.||||+++...... .++|.+|++++++++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------ 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC------
Confidence 34566666 8999999999999642 47899999997654322 467999999999999999999999883
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
.+..++||||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 89 --~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~D 160 (291)
T 1xbb_A 89 --AESWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISD 160 (291)
T ss_dssp --SSSEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred --CCCcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEcc
Confidence 24579999999999999999863 3589999999999999999999998 999999999999999999999999
Q ss_pred CCccccccccccc----ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhc
Q 003926 630 YNLPLLAENAEKV----GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 630 fGl~~~~~~~~~~----~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||++......... ....++..|+|||......++.++||||||+++|||+| |+.||.......+...+.. .
T Consensus 161 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----~ 236 (291)
T 1xbb_A 161 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----G 236 (291)
T ss_dssp CTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT----T
T ss_pred CCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc----C
Confidence 9998655332211 11233467999999888889999999999999999999 9999987654433322211 1
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
. .+.....+ ...+.+++.+||+.||++||++.||++.+.
T Consensus 237 --~-----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 237 --E-----RMGCPAGC----PREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp --C-----CCCCCTTC----CHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred --C-----CCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 0 01111122 235678888999999999999999998886
No 220
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.8e-38 Score=332.41 Aligned_cols=257 Identities=12% Similarity=0.125 Sum_probs=197.6
Q ss_pred HhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
..++|+..+.||+|+||.||+|+. .+++.||||++..... .+++.+|++++++++|++++..+++|.. ..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~------~~~ 78 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA------EGD 78 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE------ETT
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecC------CCC
Confidence 346799999999999999999995 5789999998765432 3458899999999999999988887754 145
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~Df 630 (786)
..++||||+ +|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Df 152 (296)
T 4hgt_A 79 YNVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCC
T ss_pred ceEEEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecC
Confidence 689999999 999999997532 3589999999999999999999998 99999999999999 78899999999
Q ss_pred Ccccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhH----HHHHHHH
Q 003926 631 NLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVD----LLKNQLQ 698 (786)
Q Consensus 631 Gl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~----~~~~~~~ 698 (786)
|+++....... .....++..|+|||......++.++|||||||++|||++|+.||...... .......
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 232 (296)
T 4hgt_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 232 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH
T ss_pred ccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhc
Confidence 99865543221 12345778899999998888999999999999999999999999753221 1111111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
...... .+.....+ ...+.+++.+||+.||++|||+.||++.+....
T Consensus 233 ~~~~~~--------~~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 233 KKMSTP--------IEVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HHHHSC--------HHHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred ccccch--------hhhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 111100 00000111 235678888999999999999999999887443
No 221
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=337.82 Aligned_cols=258 Identities=16% Similarity=0.214 Sum_probs=197.2
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++.... .....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER---GAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE---TTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc---CCCce
Confidence 35688899999999999999996 579999999987654445678999999999999999999999986321 12356
Q ss_pred EEEEEecCCCCChhHHhhcC-CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 555 IFLIFEYVPNGTLRSWISEG-HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
.++||||+++|+|.+++... .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 89999999999999998752 1234689999999999999999999998 9999999999999999999999999987
Q ss_pred cccccccc----------cccccccccccCccccccCC---CCcccceeehhHHHHHHHhCCCCCCCchh--HHHHHHHH
Q 003926 634 LLAENAEK----------VGHVIPYSGSIDPTNSARGK---LEEKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQ 698 (786)
Q Consensus 634 ~~~~~~~~----------~~~~~~~~~~~aPe~~~~~~---~t~ksDVwSfGvvl~ElltG~~p~~~~~~--~~~~~~~~ 698 (786)
........ .....++..|+|||.+.... ++.++|||||||++|||++|+.||..... ......+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~- 260 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV- 260 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH-
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh-
Confidence 54321110 11233577899999876543 68899999999999999999999853211 1111111
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
... . .. +. .... ...+.+++.+||+.||.+|||+.|++++++
T Consensus 261 ---~~~---~-~~--~~-~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 261 ---QNQ---L-SI--PQ-SPRH----SSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp ---HCC------C--CC-CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---hcc---C-CC--Cc-cccC----CHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 000 0 00 00 0111 235678888999999999999999999996
No 222
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-37 Score=365.46 Aligned_cols=312 Identities=21% Similarity=0.305 Sum_probs=274.1
Q ss_pred HHHHHHHHHHHhcCCCCC---------CCCCCCCCCCCCCCCCCCCccEEeC-CCCEEEEEeCCCCCCCCCCCCCcCCcc
Q 003926 30 SSQAQTLLRIQGLLNNPA---------VLSSWNITTEFCNTEPTSSLTVVCY-EESITQLHIVGNKRAPMLPLSFSMDSF 99 (786)
Q Consensus 30 ~~~~~~ll~~k~~~~~~~---------~l~~W~~~~~~C~w~~~~~~~v~c~-~~~v~~l~l~~~~~~~~l~~~~~~~~~ 99 (786)
..|++||.++++++..+. ...+|+.+++||.|. .+.||+|+ .++|+.|+|+++.+.|.+|.
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~g~lp~------- 99 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWG--AQPGVSLNSNGRVTGLSLEGFGASGRVPD------- 99 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTT--CCTTEEECTTCCEEEEECTTSCCEEEECG-------
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCccccc--CCCCeEEcCCCCEEEEEecCcccCCcCCh-------
Confidence 468999999999986542 234799889999992 12369995 47999999999998877664
Q ss_pred ccccCCCCCCCEEEccCCC-------------------------------------------------------------
Q 003926 100 VTTLVKLPDLKVLRLVSLG------------------------------------------------------------- 118 (786)
Q Consensus 100 ~~~l~~l~~L~~L~L~~n~------------------------------------------------------------- 118 (786)
.+++|++|++|+|++|.
T Consensus 100 --~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~ 177 (636)
T 4eco_A 100 --AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK 177 (636)
T ss_dssp --GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC
T ss_pred --HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccc
Confidence 67899999999999883
Q ss_pred -----------------CccCCCccCCCCCCCCEEeccCCCCCCC-----------------CCcccc--CCCCCcEEEc
Q 003926 119 -----------------LWGPLSGKISRLSSLEILNMSSNFLNGA-----------------IPQELS--ILTSLQTLIL 162 (786)
Q Consensus 119 -----------------l~g~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L 162 (786)
++| +|..|+++++|++|+|++|.++|. +|..++ ++++|++|+|
T Consensus 178 ~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L 256 (636)
T 4eco_A 178 SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEV 256 (636)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEe
Confidence 446 888999999999999999999996 999999 9999999999
Q ss_pred ccccCCCCCCcccCCCCCCCEEEccCCc-Ccc-cCCccccCC------CCCCEEEccCCcCCcCCCC---CCCCCcCCEE
Q 003926 163 DENMLAGRVPDWLGSLPILAVLSLRNNM-FNG-TLPDSFSYL------ENLRVLALSNNHFYGEVPD---FSGLTYLQVL 231 (786)
Q Consensus 163 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~---~~~l~~L~~L 231 (786)
++|.+.|.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|+.|+|++|+++ .+|. ++.+++|++|
T Consensus 257 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L 335 (636)
T 4eco_A 257 YNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGML 335 (636)
T ss_dssp ECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEE
T ss_pred cCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEE
Confidence 9999999999999999999999999998 999 899988887 99999999999999 5664 8999999999
Q ss_pred EcccCCCCCCCCcc--ccchhhhhccCCccCCcChhhhcCccc-cceeeccCccccCCCchhhCCCC--CCcEEEeecCC
Q 003926 232 DLENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYYQ-LQRLDLSSNRFVGPFPQALLSLP--SITYLNIADNK 306 (786)
Q Consensus 232 ~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~ 306 (786)
+|++|.++|.+|.. .++|+.|++++|+++ .+|..+.++++ |+.|+|++|+++ .+|..+..++ +|+.|++++|+
T Consensus 336 ~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 413 (636)
T 4eco_A 336 ECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNE 413 (636)
T ss_dssp ECCSCCCEEECCCCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred eCcCCcCccchhhhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCc
Confidence 99999999888843 368999999999998 88999999999 999999999999 7898888765 89999999999
Q ss_pred CCcccCccCC-------CCCCCCEEeCcCCcCCccCChhhh-cCCCCcEEEcCCcccCC
Q 003926 307 LTGKLFDDLS-------CNPELGFVDLSSNLLTGQLPNCLL-AGSKNRVVLYARNCLAA 357 (786)
Q Consensus 307 l~g~~~~~~~-------~~~~L~~l~ls~N~l~g~~p~~~~-~~~~~~~~~~~~N~l~~ 357 (786)
+++.+|..+. .+++|+.|+|++|+++ .+|..+. .+.+++.+++++|.++.
T Consensus 414 l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~ 471 (636)
T 4eco_A 414 IGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTE 471 (636)
T ss_dssp TTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSB
T ss_pred CCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCC
Confidence 9999999888 7889999999999999 5666554 47889999999999873
No 223
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-37 Score=336.86 Aligned_cols=264 Identities=19% Similarity=0.315 Sum_probs=201.5
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhc--CCCCCcceeeeeeeeccccCC
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISK--LRHRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~NIv~l~g~~~~~~~~~~ 550 (786)
....++|...+.||+|+||.||+|+.. |+.||||++... ..+.+.+|++++.. ++||||+++++++.... .
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~---~ 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN---G 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC---S
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC---C
Confidence 334567999999999999999999984 899999998643 35678899999887 79999999999986521 1
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhh--------cCCCCCccccCCCCCceeecCC
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH--------TGIVPGVFSNNLKITDILLDQN 622 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH--------~~~~~~ivHrdlk~~NILld~~ 622 (786)
.....++||||+++|+|.+++.+. .+++..++.++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred ccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 123689999999999999999753 5899999999999999999999 54 99999999999999999
Q ss_pred CcccccCCCcccccccccc-----cccccccccccCccccccC------CCCcccceeehhHHHHHHHhC----------
Q 003926 623 LVAKISSYNLPLLAENAEK-----VGHVIPYSGSIDPTNSARG------KLEEKIDIYDFGLILLEIIVG---------- 681 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~------~~t~ksDVwSfGvvl~ElltG---------- 681 (786)
+.+||+|||++........ .....++..|+|||.+... .++.++|||||||++|||+||
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 9999999999865543321 2334577889999987654 234689999999999999999
Q ss_pred CCCCCCchh--HHHHHHHHHHHHhcccccccccccccccc-CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 682 RPLKSRKEV--DLLKNQLQAVVTADESARRSMVDPAVNKA-CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 682 ~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
+.||..... .......... .. ....+.+... ...+....+.+++.+||+.||++|||+.||++++....
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 264 QLPYYDLVPSDPSVEEMRKVV-CE------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp CCTTTTTSCSSCCHHHHHHHH-TT------SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCccccCcCcccHHHHHHHH-HH------HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 667654211 0111111111 11 1111222211 12345667889999999999999999999999997543
No 224
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=339.87 Aligned_cols=271 Identities=18% Similarity=0.333 Sum_probs=196.5
Q ss_pred hcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHh--cCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELIS--KLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~--~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.+++. .++||||+++++++..... ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~--~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTA--DGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECT--TSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheeccccccc--CCCc
Confidence 35688889999999999999987 58999999986432 455666665544 5899999999987654322 2245
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC------CCCccccCCCCCceeecCCCcccc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI------VPGVFSNNLKITDILLDQNLVAKI 627 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~------~~~ivHrdlk~~NILld~~~~~kl 627 (786)
..++||||+++|+|.+++... ..++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 679999999999999999753 3589999999999999999999863 338999999999999999999999
Q ss_pred cCCCccccccccc---------ccccccccccccCcccccc-------CCCCcccceeehhHHHHHHHhCCCCCC-Cchh
Q 003926 628 SSYNLPLLAENAE---------KVGHVIPYSGSIDPTNSAR-------GKLEEKIDIYDFGLILLEIIVGRPLKS-RKEV 690 (786)
Q Consensus 628 ~DfGl~~~~~~~~---------~~~~~~~~~~~~aPe~~~~-------~~~t~ksDVwSfGvvl~ElltG~~p~~-~~~~ 690 (786)
+|||+++...... ......++..|+|||.+.. ..++.++|||||||++|||+||+.|+. ....
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 9999996543211 1123457789999998865 346679999999999999999976542 2111
Q ss_pred HHH-------------HHHHHHHHHhcccccccccccccccc--CcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 003926 691 DLL-------------KNQLQAVVTADESARRSMVDPAVNKA--CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 755 (786)
Q Consensus 691 ~~~-------------~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~ 755 (786)
... ........... .. .+.++.. ........+.+++.+||+.||++|||+.||++.|..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSRE--KQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTS--CC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred hHHHHhhhcccCCCchHHHHHhhhccc--cc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 000 00000000000 01 1111111 112345578899999999999999999999999973
Q ss_pred HHHhhhhhcc
Q 003926 756 AAQVQDAWHS 765 (786)
Q Consensus 756 ~~~~~~~~~~ 765 (786)
. .+.|..
T Consensus 316 l---l~~~~~ 322 (336)
T 3g2f_A 316 L---MMIWER 322 (336)
T ss_dssp H---HHCCCC
T ss_pred H---HHHHHh
Confidence 3 345544
No 225
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=340.00 Aligned_cols=258 Identities=14% Similarity=0.151 Sum_probs=197.7
Q ss_pred cCCCccCccCCCCCceeEEEEecC---------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcce----------
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKN---------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVS---------- 537 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~---------- 537 (786)
++|...+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 568888999999999999999653 789999998643 46889999999999999998
Q ss_pred -----eeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCC
Q 003926 538 -----ALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNL 612 (786)
Q Consensus 538 -----l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdl 612 (786)
+++++.. .....++||||+ +|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||
T Consensus 117 ~~i~~~~~~~~~------~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Di 185 (352)
T 2jii_A 117 LAIPTCMGFGVH------QDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNV 185 (352)
T ss_dssp CSCCCCCEEEEE------TTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCC
T ss_pred cCccchhhcccc------CCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence 4455442 135789999999 999999998631 24699999999999999999999998 9999999
Q ss_pred CCCceeecCCC--cccccCCCcccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCC
Q 003926 613 KITDILLDQNL--VAKISSYNLPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682 (786)
Q Consensus 613 k~~NILld~~~--~~kl~DfGl~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~ 682 (786)
||+||+++.++ .+||+|||+++....... .....++..|+|||......++.++|||||||++|||++|+
T Consensus 186 kp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 265 (352)
T 2jii_A 186 TAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGF 265 (352)
T ss_dssp CGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999998 899999999965533211 12235778899999998888999999999999999999999
Q ss_pred CCCCCch--hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 683 PLKSRKE--VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 683 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.||.... ...+.......... .....++..... .....+.+++.+||+.||++|||+.||++.+....
T Consensus 266 ~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 266 LPWTNCLPNTEDIMKQKQKFVDK----PGPFVGPCGHWI---RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp CTTGGGTTCHHHHHHHHHHHHHS----CCCEECTTSCEE---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CCcccCCcCHHHHHHHHHhccCC----hhhhhhhccccC---CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 9997642 22222222221111 111111111000 11235667888999999999999999999987543
No 226
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=329.37 Aligned_cols=252 Identities=19% Similarity=0.302 Sum_probs=196.0
Q ss_pred CCccCccCCCCCceeEEEEec-C---CcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 479 FDTSAFMGEGSQGQMYRGRLK-N---GTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~-~---g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
|...+.||+|+||+||+|+.. + +..||+|.+..... ...+.|.+|++++++++||||+++++++... ..
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 96 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP------EG 96 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS------SS
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC------CC
Confidence 455688999999999999853 2 33799999875433 2346799999999999999999999998641 23
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 97 ~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~ 171 (298)
T 3pls_A 97 LPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLA 171 (298)
T ss_dssp CCEEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSS
T ss_pred CcEEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCc
Confidence 358999999999999999763 24689999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccc-----ccccccccccccCccccccCCCCcccceeehhHHHHHHHhC-CCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 634 LLAENAE-----KVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 634 ~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+...... ......++..|+|||......++.++||||||+++|||++| .+|+...+.......+.. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~---~~--- 245 (298)
T 3pls_A 172 RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ---GR--- 245 (298)
T ss_dssp CTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT---TC---
T ss_pred ccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc---CC---
Confidence 6543221 11223456679999999888899999999999999999995 555655444333322211 00
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ......++ ..+.+++.+||+.||++|||+.|+++.+...
T Consensus 246 --~---~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 246 --R---LPQPEYCP----DSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp --C---CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --C---CCCCccch----HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0 00111122 3567888899999999999999999998744
No 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4e-38 Score=342.71 Aligned_cols=272 Identities=17% Similarity=0.292 Sum_probs=202.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++....+. ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE--NFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST--TCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC--ccc
Confidence 457888999999999999999965 6899999999754322 245788999999999999999999987643221 235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 6899999998 699999875 2589999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccc-----------cccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 634 LLAENAEK-----------VGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 634 ~~~~~~~~-----------~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
........ .....++..|+|||.+.. ..++.++|||||||++|||++|++||...........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 65432111 112356778999998654 678999999999999999999999998765433222222111
Q ss_pred Hhcc-c-cccccccc----------ccc----ccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 702 TADE-S-ARRSMVDP----------AVN----KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 702 ~~~~-~-~~~~~~d~----------~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.... . .......+ ... ..........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 1100 0 00000000 000 0000112345678889999999999999999999998753
No 228
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.7e-38 Score=343.47 Aligned_cols=270 Identities=19% Similarity=0.235 Sum_probs=203.1
Q ss_pred HhcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CC-----Ccceeeeeeeeccc
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HR-----HLVSALGHCFECYF 547 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----NIv~l~g~~~~~~~ 547 (786)
..++|+..+.||+|+||+||+|+.. +++.||||+++... ....++.+|+++++.++ |+ +|+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--- 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF--- 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE---
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc---
Confidence 3568889999999999999999865 68999999997432 22466788999988885 55 48999998865
Q ss_pred cCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec--CCCcc
Q 003926 548 DDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD--QNLVA 625 (786)
Q Consensus 548 ~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--~~~~~ 625 (786)
.+..++||||++ |+|.+++.... ...+++..+..++.|++.||.|||.. ..+|+||||||+|||++ .++.+
T Consensus 128 ----~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~ 200 (382)
T 2vx3_A 128 ----RNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAI 200 (382)
T ss_dssp ----TTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCE
T ss_pred ----CCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcE
Confidence 457899999996 59999998643 23589999999999999999999952 23899999999999994 57889
Q ss_pred cccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 626 KISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 626 kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
||+|||+++..... .....++..|+|||.+....++.++|||||||++|||+||++||...........+........
T Consensus 201 kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 278 (382)
T 2vx3_A 201 KIVDFGSSCQLGQR--IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278 (382)
T ss_dssp EECCCTTCEETTCC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred EEEeccCceecccc--cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999998765332 2344677889999999888899999999999999999999999986544333222222111100
Q ss_pred ccc-----------ccccc-----------------ccc--------------------cccCcHHHHHHHHHHHHHhcc
Q 003926 706 SAR-----------RSMVD-----------------PAV--------------------NKACLDESLKTMMEVCVRCLL 737 (786)
Q Consensus 706 ~~~-----------~~~~d-----------------~~~--------------------~~~~~~~~~~~~~~l~~~Cl~ 737 (786)
... ..+.+ +.. ...........+.+++.+||+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 358 (382)
T 2vx3_A 279 AHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLD 358 (382)
T ss_dssp HHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcC
Confidence 000 00000 000 000112334578899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 003926 738 KNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 738 ~dP~~RPt~~evl~~l~~~~ 757 (786)
.||++|||+.|+++|+||.+
T Consensus 359 ~dP~~Rpta~e~L~hp~f~~ 378 (382)
T 2vx3_A 359 YDPKTRIQPYYALQHSFFKK 378 (382)
T ss_dssp SCTTTSCCHHHHTTSGGGCC
T ss_pred CChhhCCCHHHHhcCccccc
Confidence 99999999999999998754
No 229
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=340.08 Aligned_cols=247 Identities=15% Similarity=0.131 Sum_probs=193.5
Q ss_pred HhcCCCccCccCCCCCceeEEEE------ecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC---CCCcceeeeeeeec
Q 003926 475 ATNNFDTSAFMGEGSQGQMYRGR------LKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR---HRHLVSALGHCFEC 545 (786)
Q Consensus 475 ~~~~f~~~~~iG~G~fg~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~~ 545 (786)
..++|...+.||+|+||+||+|+ ..+++.||||+++.. ...+|.+|++++++++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~- 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF- 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-
Confidence 35678888999999999999994 446899999998653 4678889999999887 9999999999875
Q ss_pred cccCCCCceEEEEEecCCCCChhHHhhcC--CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC--
Q 003926 546 YFDDSSVSRIFLIFEYVPNGTLRSWISEG--HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ-- 621 (786)
Q Consensus 546 ~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-- 621 (786)
.+..++|||||++|+|.+++... .....++|..++.++.|+++||+|||+. +||||||||+|||++.
T Consensus 139 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 139 ------QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp ------SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred ------CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 45689999999999999999742 1234699999999999999999999997 9999999999999998
Q ss_pred ---------CCcccccCCCcccccc---cccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch
Q 003926 622 ---------NLVAKISSYNLPLLAE---NAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 622 ---------~~~~kl~DfGl~~~~~---~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
++.+||+|||+++... .........++..|+|||.+.+..|+.++|||||||++|||+||+.||....
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 289 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE 289 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCC
Confidence 8999999999996443 2223344568889999999988889999999999999999999999985432
Q ss_pred hHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCC-CCHHHHHHHHH
Q 003926 690 VDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER-PSVEDVLWNLQ 754 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R-Pt~~evl~~l~ 754 (786)
... ... ..........+ .+.+++..|++.+|.+| |+++++.+.+.
T Consensus 290 ~~~-------------~~~----~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 290 GGE-------------CKP----EGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp TTE-------------EEE----CSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred CCc-------------eee----chhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 110 000 01111111223 33456678999999999 56666665554
No 230
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=338.84 Aligned_cols=269 Identities=15% Similarity=0.212 Sum_probs=199.2
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC--ChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH--STRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++...... ....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~ 102 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-RNFY 102 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc-ccce
Confidence 46778899999999999999964 6999999999764322 246789999999999999999999988642110 0112
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..++||||++ |+|.+++.. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 4599999998 699888743 489999999999999999999997 9999999999999999999999999998
Q ss_pred cccccccccccccccccccCcccccc-CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhc-ccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSAR-GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTAD-ESARRSM 711 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 711 (786)
...... .....++..|+|||.+.. ..++.++|||||||++|||++|++||...+.......+....... ......+
T Consensus 174 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 174 RHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp TC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred cCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 654322 223456788999998766 678999999999999999999999997655433222221111100 0000000
Q ss_pred c---------------cccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 712 V---------------DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 712 ~---------------d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .+.. ..........+.+++.+||+.||++|||+.|+++|+||...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 252 NDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp SCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred hhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0 0000 00111223467788899999999999999999999998643
No 231
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=9.3e-38 Score=337.36 Aligned_cols=266 Identities=17% Similarity=0.240 Sum_probs=204.6
Q ss_pred cCCCccCccCCCCCceeEEEEe-c-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCC------cceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-K-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH------LVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N------Iv~l~g~~~~~~~~ 548 (786)
++|+..+.||+|+||.||+|+. . +|+.||||+++... ...+.+.+|++++++++|+| |+++++++..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~---- 88 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH---- 88 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE----
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc----
Confidence 4688899999999999999986 3 68999999987432 23467889999999887665 9999998865
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC-------
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ------- 621 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~------- 621 (786)
.+..++||||+ +|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 89 ---~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 160 (339)
T 1z57_A 89 ---HGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAY 160 (339)
T ss_dssp ---TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred ---CCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccccc
Confidence 45789999999 889999997643 24689999999999999999999997 9999999999999987
Q ss_pred ------------CCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch
Q 003926 622 ------------NLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 622 ------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
++.+||+|||++...... .....++..|+|||.+....++.++|||||||++|||++|++||....
T Consensus 161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 161 NPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp C----CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred CCccccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 667999999998654332 233456788999999988889999999999999999999999997655
Q ss_pred hHHHHHHHHHHHHhccccc------cccc---------------------ccc-ccccCcHHHHHHHHHHHHHhccCCCC
Q 003926 690 VDLLKNQLQAVVTADESAR------RSMV---------------------DPA-VNKACLDESLKTMMEVCVRCLLKNPA 741 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~------~~~~---------------------d~~-~~~~~~~~~~~~~~~l~~~Cl~~dP~ 741 (786)
.......+........... .... .+. ............+.+++.+||+.||+
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 4433333322211100000 0000 000 00011223456788999999999999
Q ss_pred CCCCHHHHHHHHHHHH
Q 003926 742 ERPSVEDVLWNLQFAA 757 (786)
Q Consensus 742 ~RPt~~evl~~l~~~~ 757 (786)
+|||+.|+++|+||..
T Consensus 319 ~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 319 KRITLREALKHPFFDL 334 (339)
T ss_dssp TSCCHHHHTTSGGGGG
T ss_pred cccCHHHHhcCHHHHH
Confidence 9999999999998764
No 232
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.9e-37 Score=345.77 Aligned_cols=259 Identities=12% Similarity=0.143 Sum_probs=197.3
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ..++.+|+++++.++|++.+..+.++.. ..+.
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~------~~~~ 77 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV------EGDY 77 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE------ETTE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe------eCCE
Confidence 35788899999999999999995 5799999998765432 3458899999999988655555544432 1456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---cCCCcccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL---DQNLVAKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DfG 631 (786)
.++||||+ +|+|.+++.... ..+++..++.++.|++.||+|||+. +||||||||+|||+ +.++.+||+|||
T Consensus 78 ~~lvme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFG 151 (483)
T 3sv0_A 78 NVLVMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (483)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCT
T ss_pred EEEEEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCC
Confidence 89999999 999999997532 3699999999999999999999997 99999999999999 688999999999
Q ss_pred cccccccccc--------cccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHh
Q 003926 632 LPLLAENAEK--------VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTA 703 (786)
Q Consensus 632 l~~~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (786)
+++....... .....++..|+|||.+....++.++|||||||++|||++|+.||...........+......
T Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~ 231 (483)
T 3sv0_A 152 LAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK 231 (483)
T ss_dssp TCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH
T ss_pred cceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc
Confidence 9976543221 12456788899999999889999999999999999999999999764322211111111111
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 704 DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 704 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. ..... +.+...+ ..++.+++.+||+.||++||++.+|++.+...
T Consensus 232 ~---~~~~~-~~l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 232 K---VATSI-EALCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp H---HHSCH-HHHHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred c---ccccH-HHHhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 0 00000 0111112 23567888999999999999999999888644
No 233
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.2e-38 Score=346.73 Aligned_cols=271 Identities=17% Similarity=0.202 Sum_probs=202.2
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC--------CCCcceeeeeeeecc
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR--------HRHLVSALGHCFECY 546 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~--------H~NIv~l~g~~~~~~ 546 (786)
.++|...+.||+|+||+||+|+. .+++.||||+++... ...+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 35788899999999999999985 468999999997432 23467899999999986 788999999886321
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCC---
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNL--- 623 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~--- 623 (786)
......++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ---~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 115 ---VNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp ---TTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ---CCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 1245789999999 567766665432 246899999999999999999999842 899999999999999775
Q ss_pred ----------------------------------------------cccccCCCcccccccccccccccccccccCcccc
Q 003926 624 ----------------------------------------------VAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS 657 (786)
Q Consensus 624 ----------------------------------------------~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~ 657 (786)
.+||+|||++...... .....++..|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhh
Confidence 7999999998655432 2334578899999999
Q ss_pred ccCCCCcccceeehhHHHHHHHhCCCCCCCchh-------HHHHHHHHHHHHhcc------ccccccc----------cc
Q 003926 658 ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-------DLLKNQLQAVVTADE------SARRSMV----------DP 714 (786)
Q Consensus 658 ~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~----------d~ 714 (786)
....++.++|||||||++|||+||++||..... +.+............ ....... +.
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 888899999999999999999999999864321 111111111100000 0000000 00
Q ss_pred c---------ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 715 A---------VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 715 ~---------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. -......+....+.+++.+||+.||++|||+.||++|+||.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 0 00122455667888999999999999999999999998863
No 234
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.1e-37 Score=368.04 Aligned_cols=312 Identities=21% Similarity=0.277 Sum_probs=264.9
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCCCC-----CC--CCCCC----CCC---ccEEeC-CCCEEEEEeCCCCCCCCCCC
Q 003926 28 LQSSQAQTLLRIQGLLNNPAVLSSWNITT-----EF--CNTEP----TSS---LTVVCY-EESITQLHIVGNKRAPMLPL 92 (786)
Q Consensus 28 ~~~~~~~~ll~~k~~~~~~~~l~~W~~~~-----~~--C~w~~----~~~---~~v~c~-~~~v~~l~l~~~~~~~~l~~ 92 (786)
+..+|++||++||+++.+| +|+.+. +| |+|.. ..| .||.|+ .++|+.|+|+++++.|.+|.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 4567999999999999876 797654 56 99911 012 479997 58999999999998877664
Q ss_pred CCcCCccccccCCCCCCCEEEc-cCCCCccC-------------------------------------------------
Q 003926 93 SFSMDSFVTTLVKLPDLKVLRL-VSLGLWGP------------------------------------------------- 122 (786)
Q Consensus 93 ~~~~~~~~~~l~~l~~L~~L~L-~~n~l~g~------------------------------------------------- 122 (786)
.+++|++|++|+| ++|.+.|.
T Consensus 342 ---------~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~ 412 (876)
T 4ecn_A 342 ---------AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNP 412 (876)
T ss_dssp ---------GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCT
T ss_pred ---------HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCc
Confidence 6789999999999 77765554
Q ss_pred ---------------------------CCccCCCCCCCCEEeccCCCCCC-----------------CCCcccc--CCCC
Q 003926 123 ---------------------------LSGKISRLSSLEILNMSSNFLNG-----------------AIPQELS--ILTS 156 (786)
Q Consensus 123 ---------------------------~~~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~ 156 (786)
+|..|++|++|+.|+|++|.|+| .+|..++ ++++
T Consensus 413 ~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~ 492 (876)
T 4ecn_A 413 EMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKD 492 (876)
T ss_dssp TSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred cccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCC
Confidence 78889999999999999999998 3899988 9999
Q ss_pred CcEEEcccccCCCCCCcccCCCCCCCEEEccCCc-Ccc-cCCccccCCC-------CCCEEEccCCcCCcCCCC---CCC
Q 003926 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM-FNG-TLPDSFSYLE-------NLRVLALSNNHFYGEVPD---FSG 224 (786)
Q Consensus 157 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~---~~~ 224 (786)
|++|+|++|.+.+.+|..|+++++|+.|+|++|+ ++| .+|..|++++ +|+.|+|++|+++ .+|. |.+
T Consensus 493 L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~ 571 (876)
T 4ecn_A 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQK 571 (876)
T ss_dssp CCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTT
T ss_pred CCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhc
Confidence 9999999999999999999999999999999998 998 8888776665 9999999999999 5665 899
Q ss_pred CCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCcChhhhcCccc-cceeeccCccccCCCchhhCCCCC--CcE
Q 003926 225 LTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAIPAEVSSYYQ-LQRLDLSSNRFVGPFPQALLSLPS--ITY 299 (786)
Q Consensus 225 l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~ 299 (786)
+++|+.|+|++|.++ .+|.. .++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+|+ .+|..+..++. |+.
T Consensus 572 L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~ 648 (876)
T 4ecn_A 572 MVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGS 648 (876)
T ss_dssp CTTCCEEECTTSCCC-BCCCCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEE
T ss_pred CCCCCEEECCCCCcc-cchhhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCE
Confidence 999999999999998 66643 368999999999998 88989999999 999999999998 78888887765 999
Q ss_pred EEeecCCCCcccCccC---C--CCCCCCEEeCcCCcCCccCChhhh-cCCCCcEEEcCCcccCC
Q 003926 300 LNIADNKLTGKLFDDL---S--CNPELGFVDLSSNLLTGQLPNCLL-AGSKNRVVLYARNCLAA 357 (786)
Q Consensus 300 L~l~~N~l~g~~~~~~---~--~~~~L~~l~ls~N~l~g~~p~~~~-~~~~~~~~~~~~N~l~~ 357 (786)
|+|++|+++|.+|... . .+++|+.|+|++|.++ .+|..+. .++++..+++++|.+..
T Consensus 649 L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ 711 (876)
T 4ecn_A 649 VDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS 711 (876)
T ss_dssp EECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC
T ss_pred EECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc
Confidence 9999999998776432 2 3458999999999999 6777765 67889999999998873
No 235
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=8.6e-38 Score=332.04 Aligned_cols=261 Identities=20% Similarity=0.330 Sum_probs=194.5
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccc------c
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYF------D 548 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~------~ 548 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++++++||||+++++++.+... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 456888999999999999999964 79999999986432 234679999999999999999999998864210 0
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
....+..++||||+++|+|.+++... ...+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 11245789999999999999999853 23578899999999999999999998 99999999999999999999999
Q ss_pred CCCcccccccc---------------cccccccccccccCccccccC-CCCcccceeehhHHHHHHHhCCCCCCCc-hhH
Q 003926 629 SYNLPLLAENA---------------EKVGHVIPYSGSIDPTNSARG-KLEEKIDIYDFGLILLEIIVGRPLKSRK-EVD 691 (786)
Q Consensus 629 DfGl~~~~~~~---------------~~~~~~~~~~~~~aPe~~~~~-~~t~ksDVwSfGvvl~ElltG~~p~~~~-~~~ 691 (786)
|||++...... .......++..|+|||.+... .++.++|||||||++|||++ |+... +..
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~ 235 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV 235 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH
Confidence 99998654321 111234567789999988654 68999999999999999998 44322 111
Q ss_pred HHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 692 LLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
.. ........ ....+. ........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 236 ~~---~~~~~~~~-----~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (303)
T 1zy4_A 236 NI---LKKLRSVS-----IEFPPD----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289 (303)
T ss_dssp HH---HHHHHSTT-----CCCCTT----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred HH---HHhccccc-----cccCcc----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence 11 11111100 001111 12222345678888999999999999999999998753
No 236
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=8.3e-38 Score=336.51 Aligned_cols=265 Identities=14% Similarity=0.228 Sum_probs=181.9
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCC-ChHHHHHHHH-HHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCH-STRNFMHHIE-LISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~-~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||+++..... ...++.+|+. +++.++||||++++|++.. .
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-------~ 93 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-------E 93 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-------S
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-------C
Confidence 356778899999999999999975 7999999999765322 2345666766 7788899999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcC--CCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 553 SRIFLIFEYVPNGTLRSWISEG--HAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
+..++||||+++ +|.+++... .....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccC
Confidence 568999999985 888877521 1134689999999999999999999984 38999999999999999999999999
Q ss_pred CcccccccccccccccccccccCcccc----ccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNS----ARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADES 706 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~----~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (786)
|+++............++..|+|||.+ ....++.++|||||||++|||++|+.||....... ..+ ..
T Consensus 171 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~----~~--- 241 (327)
T 3aln_A 171 GISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQL----TQ--- 241 (327)
T ss_dssp SSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CC---
T ss_pred CCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--HHH----HH---
Confidence 998665443333334577889999987 45668999999999999999999999987532110 000 00
Q ss_pred cccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 003926 707 ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 760 (786)
Q Consensus 707 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~~~ 760 (786)
......+.+...........+.+++.+||+.||++|||+.||++|+|+....+
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~ 294 (327)
T 3aln_A 242 -VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294 (327)
T ss_dssp -CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred -HhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhHh
Confidence 00000011111111112235678888999999999999999999999886543
No 237
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.8e-38 Score=337.02 Aligned_cols=259 Identities=15% Similarity=0.285 Sum_probs=197.2
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC--ChHHHHHHHHHHhcCC--CCCcceeeeeeeecc
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH--STRNFMHHIELISKLR--HRHLVSALGHCFECY 546 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~~~ 546 (786)
.+....++|+..+.||+|+||.||+|+..+++.||||++...... ..+.|.+|++++++++ |+||+++++++..
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-- 99 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-- 99 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC--
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec--
Confidence 333445678889999999999999999888999999999755432 3467899999999997 5999999998875
Q ss_pred ccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccc
Q 003926 547 FDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAK 626 (786)
Q Consensus 547 ~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 626 (786)
.+..++||| +.+|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||++++ +.+|
T Consensus 100 -----~~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~k 166 (313)
T 3cek_A 100 -----DQYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLK 166 (313)
T ss_dssp -----SSEEEEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEE
T ss_pred -----CCEEEEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEE
Confidence 456899999 5678999999863 3689999999999999999999997 9999999999999975 7899
Q ss_pred ccCCCcccccccccc---cccccccccccCcccccc-----------CCCCcccceeehhHHHHHHHhCCCCCCCchhHH
Q 003926 627 ISSYNLPLLAENAEK---VGHVIPYSGSIDPTNSAR-----------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDL 692 (786)
Q Consensus 627 l~DfGl~~~~~~~~~---~~~~~~~~~~~aPe~~~~-----------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~ 692 (786)
|+|||++........ .....++..|+|||.... ..++.++|||||||++|||++|+.||.......
T Consensus 167 L~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (313)
T 3cek_A 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246 (313)
T ss_dssp ECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred EeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 999999865533221 123356788999998764 468899999999999999999999986532211
Q ss_pred HHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 693 LKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
. .+....... . ........ ...+.+++.+||+.||++||++.|+++|+|+..
T Consensus 247 -~-~~~~~~~~~---~----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~ 298 (313)
T 3cek_A 247 -S-KLHAIIDPN---H----EIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298 (313)
T ss_dssp -H-HHHHHHCTT---S----CCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred -H-HHHHHHhcc---c----ccCCcccc----hHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence 0 111111100 0 01111111 235667888999999999999999999999864
No 238
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.9e-38 Score=330.23 Aligned_cols=253 Identities=20% Similarity=0.325 Sum_probs=190.2
Q ss_pred cCCCccCccCCCCCceeEEEEec--CCc--EEEEEEecccCC---CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK--NGT--FVAIRCLKMKKC---HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~--~g~--~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
++|+..+.||+|+||.||+|++. ++. .||||+++.... ...+.|.+|++++++++||||+++++++..
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 92 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----- 92 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc-----
Confidence 46788899999999999999853 333 699999875432 234679999999999999999999998864
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 93 ---~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~D 164 (291)
T 1u46_A 93 ---PPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGD 164 (291)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred ---CCceeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcc
Confidence 23789999999999999997532 3589999999999999999999997 999999999999999999999999
Q ss_pred CCcccccccccc----cccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhc
Q 003926 630 YNLPLLAENAEK----VGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTAD 704 (786)
Q Consensus 630 fGl~~~~~~~~~----~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (786)
||++........ .....++..|+|||......++.++||||||+++|||++ |+.||...........+ ....
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~~~ 241 (291)
T 1u46_A 165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEG 241 (291)
T ss_dssp CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HTSC
T ss_pred ccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHH---HccC
Confidence 999865533221 112334557999999888889999999999999999999 99999765543332211 1110
Q ss_pred cccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 705 ESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 705 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. .+.....+ ...+.+++.+||+.||++|||+.|+++++...
T Consensus 242 ---~----~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 242 ---E----RLPRPEDC----PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp ---C----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---C----CCCCCcCc----CHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 0 00111112 23567888899999999999999999988744
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-37 Score=334.47 Aligned_cols=263 Identities=16% Similarity=0.225 Sum_probs=176.6
Q ss_pred hcCCCcc-CccCCCCCceeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 476 TNNFDTS-AFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 476 ~~~f~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
.++|... +.||+|+||+||+|+.. +|+.||||++... .....+....++.++||||+++++++.... ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~---~~~~ 99 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMH---HGKR 99 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE---TTEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhcc---CCCc
Confidence 4567774 46999999999999976 6999999998642 122222333466779999999999886421 1234
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~Df 630 (786)
..++||||+++|+|.+++.... ...+++.++..++.|++.||.|||+. +|+||||||+||+++. ++.+||+||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred eEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 5899999999999999998642 24699999999999999999999998 9999999999999986 455999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|++...... ......++..|+|||.+....++.++|||||||++|||++|+.||.................... ..
T Consensus 176 g~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~ 251 (336)
T 3fhr_A 176 GFAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ---YG 251 (336)
T ss_dssp TTCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------C
T ss_pred ccceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc---cc
Confidence 998655432 22234567889999999888899999999999999999999999965433222111111000000 00
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
...+ ........+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 252 ~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 252 FPNP-----EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp CCTT-----TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred cCch-----hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 0000 011122356788889999999999999999999998753
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.1e-37 Score=344.86 Aligned_cols=253 Identities=17% Similarity=0.215 Sum_probs=186.7
Q ss_pred CCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceEEE
Q 003926 479 FDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +|||||++++++.. .+..++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-------~~~~~l 86 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETT-------DRFLYI 86 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEEC-------SSEEEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEec-------CCeEEE
Confidence 34467899999999987766679999999986532 45688999999886 89999999988764 457899
Q ss_pred EEecCCCCChhHHhhcCCCCC-C---CCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCC-----------
Q 003926 558 IFEYVPNGTLRSWISEGHAHQ-S---LTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQN----------- 622 (786)
Q Consensus 558 V~Ey~~~GsL~~~l~~~~~~~-~---l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~----------- 622 (786)
|||||+ |+|.+++....... . .++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999996 69999998642211 1 13334578999999999999997 99999999999999754
Q ss_pred --CcccccCCCcccccccccc-----cccccccccccCcccccc-------CCCCcccceeehhHHHHHHHh-CCCCCCC
Q 003926 623 --LVAKISSYNLPLLAENAEK-----VGHVIPYSGSIDPTNSAR-------GKLEEKIDIYDFGLILLEIIV-GRPLKSR 687 (786)
Q Consensus 623 --~~~kl~DfGl~~~~~~~~~-----~~~~~~~~~~~aPe~~~~-------~~~t~ksDVwSfGvvl~Ellt-G~~p~~~ 687 (786)
+.+||+|||+++....... .....++..|+|||.+.. ..++.++|||||||++|||+| |++||..
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 4899999999976543221 123467889999998865 568999999999999999999 9999975
Q ss_pred chhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 688 KEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
..... ...+. .. ... +.............+.+++.+||+.||++|||+.||++|+||.
T Consensus 243 ~~~~~-~~i~~----~~-~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~ 300 (434)
T 2rio_A 243 KYSRE-SNIIR----GI-FSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300 (434)
T ss_dssp TTTHH-HHHHH----TC-CCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred chhhH-HHHhc----CC-CCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence 43221 11111 00 000 0111111234556788899999999999999999999999873
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.2e-37 Score=335.53 Aligned_cols=268 Identities=16% Similarity=0.217 Sum_probs=202.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CC-cEEEEEEecccCCCChHHHHHHHHHHhcCCCCC------cceeeeeeeecccc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NG-TFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH------LVSALGHCFECYFD 548 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N------Iv~l~g~~~~~~~~ 548 (786)
++|+..+.||+|+||+||+|+.. ++ +.||||+++... ...+.+.+|++++++++|++ ++.+.+++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~---- 93 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF---- 93 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE----
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee----
Confidence 57888999999999999999964 44 799999997432 23467889999999998776 8888887764
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceee---------
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILL--------- 619 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILl--------- 619 (786)
.+..++||||+ +|++.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 94 ---~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~ 165 (355)
T 2eu9_A 94 ---HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLY 165 (355)
T ss_dssp ---TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred ---CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccc
Confidence 45789999999 567777776532 24689999999999999999999997 99999999999999
Q ss_pred ----------cCCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCch
Q 003926 620 ----------DQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKE 689 (786)
Q Consensus 620 ----------d~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~ 689 (786)
+.++.+||+|||+++..... .....++..|+|||.+....++.++|||||||++|||++|++||....
T Consensus 166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 166 NEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp CCC-CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 66789999999998654322 233467788999999988899999999999999999999999998755
Q ss_pred hHHHHHHHHHHHHhccccc------cccc-------c--------------c-cccccCcHHHHHHHHHHHHHhccCCCC
Q 003926 690 VDLLKNQLQAVVTADESAR------RSMV-------D--------------P-AVNKACLDESLKTMMEVCVRCLLKNPA 741 (786)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~------~~~~-------d--------------~-~~~~~~~~~~~~~~~~l~~~Cl~~dP~ 741 (786)
.......+........... .... + + .............+.+++.+||+.||+
T Consensus 244 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 244 NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 4433332222211100000 0000 0 0 000001123345778999999999999
Q ss_pred CCCCHHHHHHHHHHHHHh
Q 003926 742 ERPSVEDVLWNLQFAAQV 759 (786)
Q Consensus 742 ~RPt~~evl~~l~~~~~~ 759 (786)
+|||+.|+++|+||....
T Consensus 324 ~Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 324 QRITLAEALLHPFFAGLT 341 (355)
T ss_dssp TSCCHHHHTTSGGGGGCC
T ss_pred hCcCHHHHhcChhhcCCC
Confidence 999999999999987643
No 242
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.4e-37 Score=359.73 Aligned_cols=255 Identities=18% Similarity=0.314 Sum_probs=200.6
Q ss_pred HHhcCCCccCccCCCCCceeEEEEec----CCcEEEEEEecccCCC-ChHHHHHHHHHHhcCCCCCcceeeeeeeecccc
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRLK----NGTFVAIRCLKMKKCH-STRNFMHHIELISKLRHRHLVSALGHCFECYFD 548 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~ 548 (786)
...++|+..+.||+|+||.||+|+.. .+..||||+++..... ..+.|.+|+.++++++|||||+++|++.+
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---- 462 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---- 462 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 34567888899999999999999864 2568999998754322 24679999999999999999999998743
Q ss_pred CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCccccc
Q 003926 549 DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKIS 628 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 628 (786)
+..++||||+++|+|.+++.... ..+++..++.++.|+++||.|||+. +|+||||||+|||++.++.+||+
T Consensus 463 ----~~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 463 ----NPVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred ----CceEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence 34799999999999999997532 3589999999999999999999997 99999999999999999999999
Q ss_pred CCCccccccccccc--ccccccccccCccccccCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHHhcc
Q 003926 629 SYNLPLLAENAEKV--GHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVTADE 705 (786)
Q Consensus 629 DfGl~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (786)
|||+++........ ....++..|+|||.+....++.++|||||||++|||++ |++||...........+.. ..
T Consensus 534 DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~---~~- 609 (656)
T 2j0j_A 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN---GE- 609 (656)
T ss_dssp CCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH---TC-
T ss_pred ecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc---CC-
Confidence 99999765432221 12234567999999988899999999999999999997 9999976554433222211 10
Q ss_pred ccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 706 SARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 706 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. +..+..++ ..+.+++.+||+.||++|||+.||++++...
T Consensus 610 --~-----~~~~~~~~----~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 610 --R-----LPMPPNCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp --C-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --C-----CCCCcccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0 01111222 3567888899999999999999999998754
No 243
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=330.47 Aligned_cols=254 Identities=19% Similarity=0.319 Sum_probs=195.3
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccC
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDD 549 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~ 549 (786)
+....++|+..+.||+|+||.||+|+.+. .||||+++.... ...+.|.+|++++++++||||+++++++..
T Consensus 28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 100 (319)
T 2y4i_B 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS----- 100 (319)
T ss_dssp SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-----
T ss_pred ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----
Confidence 33445678889999999999999999764 499999875432 234568899999999999999999999875
Q ss_pred CCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccC
Q 003926 550 SSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISS 629 (786)
Q Consensus 550 ~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 629 (786)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|
T Consensus 101 --~~~~~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~D 172 (319)
T 2y4i_B 101 --PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITD 172 (319)
T ss_dssp --SSCEEEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECC
T ss_pred --CCceEEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEee
Confidence 35689999999999999999763 23689999999999999999999997 999999999999998 67999999
Q ss_pred CCcccccccc------cccccccccccccCcccccc---------CCCCcccceeehhHHHHHHHhCCCCCCCchhHHHH
Q 003926 630 YNLPLLAENA------EKVGHVIPYSGSIDPTNSAR---------GKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLK 694 (786)
Q Consensus 630 fGl~~~~~~~------~~~~~~~~~~~~~aPe~~~~---------~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~ 694 (786)
||++...... .......++..|+|||.... ..++.++|||||||++|||++|+.||.........
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 252 (319)
T 2y4i_B 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII 252 (319)
T ss_dssp CSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH
T ss_pred cCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9997544211 11223346778999998753 45789999999999999999999999876544332
Q ss_pred HHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 003926 695 NQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 754 (786)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~ 754 (786)
..+.. . ........ .++ ..+.+++.+||+.||++|||+.|+++.+.
T Consensus 253 ~~~~~---~---~~~~~~~~----~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 253 WQMGT---G---MKPNLSQI----GMG----KEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp HHHHT---T---CCCCCCCS----SCC----TTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred HHhcc---C---CCCCCCcC----CCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 22111 0 00111111 111 24567888999999999999999999886
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=325.12 Aligned_cols=259 Identities=16% Similarity=0.296 Sum_probs=180.8
Q ss_pred hcCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC--hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS--TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
.++|+..+.||+|+||.||+|+.. +|+.||||++....... .+.+.++..+++.++||||+++++++.. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-------~ 96 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-------N 96 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------S
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-------C
Confidence 456788899999999999999975 69999999997654321 2334455567888999999999999875 4
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..++||||+ ++.+..+.... ...+++..+..++.|+++||.|||+. .+|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 171 (318)
T 2dyl_A 97 TDVFIAMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGI 171 (318)
T ss_dssp SEEEEEECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CcEEEEEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCC
Confidence 5789999999 44555554431 23689999999999999999999972 1899999999999999999999999999
Q ss_pred ccccccccccccccccccccCccccc-----cCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSA-----RGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESA 707 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~-----~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (786)
+.............++..|+|||.+. ...++.++|||||||++|||++|+.||....... ..+........
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~-- 247 (318)
T 2dyl_A 172 SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF--EVLTKVLQEEP-- 247 (318)
T ss_dssp C--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHHHHHHHSCC--
T ss_pred chhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH--HHHHHHhccCC--
Confidence 86554433333445778899999874 4568999999999999999999999997532211 11111111110
Q ss_pred ccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 708 RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 708 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
... +. ...++ ..+.+++.+||+.||.+||++.|+++|+|+...
T Consensus 248 --~~~-~~-~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 248 --PLL-PG-HMGFS----GDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp --CCC-CS-SSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred --CCC-Cc-cCCCC----HHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 000 00 00111 346678889999999999999999999998764
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=343.89 Aligned_cols=251 Identities=17% Similarity=0.208 Sum_probs=186.0
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCCCceE
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
.+|+..+.||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +|||||++++++.. ....
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-------~~~~ 93 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKD-------RQFQ 93 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEE-------TTEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEec-------CCEE
Confidence 4577889999999999765555678999999986533 23467899999999 89999999998765 4568
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-----CCCcccccCC
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-----QNLVAKISSY 630 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-----~~~~~kl~Df 630 (786)
|+|||||+ |+|.+++.... ..+.+...+.++.|+++||.|||+. +|+||||||+|||++ ....+||+||
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DF 167 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDF 167 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred EEEEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence 99999997 69999998643 2344455678999999999999997 999999999999994 3345789999
Q ss_pred Cccccccccc----ccccccccccccCccccc---cCCCCcccceeehhHHHHHHHh-CCCCCCCchhHHHHHHHHHHHH
Q 003926 631 NLPLLAENAE----KVGHVIPYSGSIDPTNSA---RGKLEEKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVVT 702 (786)
Q Consensus 631 Gl~~~~~~~~----~~~~~~~~~~~~aPe~~~---~~~~t~ksDVwSfGvvl~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 702 (786)
|+++...... ......++..|+|||.+. ...++.++|||||||++|||+| |++||........... ..
T Consensus 168 G~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~----~~ 243 (432)
T 3p23_A 168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL----LG 243 (432)
T ss_dssp TEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH----TT
T ss_pred cceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH----hc
Confidence 9997654321 223346788999999986 4567889999999999999999 8999865433221111 00
Q ss_pred hccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 703 ADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 703 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
.. ......+ .......+.+++.+||+.||++|||+.||++|+||.
T Consensus 244 ~~---~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~ 288 (432)
T 3p23_A 244 AC---SLDCLHP------EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288 (432)
T ss_dssp CC---CCTTSCT------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTC
T ss_pred cC---CccccCc------cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCcccc
Confidence 00 0011111 112233466888999999999999999999999864
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-37 Score=356.05 Aligned_cols=276 Identities=16% Similarity=0.139 Sum_probs=204.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCce
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVSR 554 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~~ 554 (786)
++|...+.||+|+||.||+|+. .+|+.||||+++.... ...+.|.+|++++++++|||||++++++..... ....+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~-~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK-LAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC-CCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc-ccCCCe
Confidence 5789999999999999999996 4689999999875432 234679999999999999999999998753111 122456
Q ss_pred EEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCc---ccccCCC
Q 003926 555 IFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLV---AKISSYN 631 (786)
Q Consensus 555 ~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~DfG 631 (786)
.++|||||++|+|.+++........+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998754444688999999999999999999997 9999999999999996654 8999999
Q ss_pred cccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHH---HHhc---c
Q 003926 632 LPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV---VTAD---E 705 (786)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~---~~~~---~ 705 (786)
++.............++..|+|||.+....++.++|||||||++|||++|+.||....... .+.... .... .
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~--~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV--QWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH--HSSTTCC------CCSC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh--hhhhhhhcccchhhhhh
Confidence 9976655444445567889999999988899999999999999999999999986532110 000000 0000 0
Q ss_pred ccccc--ccccc--ccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 706 SARRS--MVDPA--VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 706 ~~~~~--~~d~~--~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
..... ..... ............+.+++.+||+.||++|||+.|+++|.||...
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 00000 00000 0112233345677889999999999999999999999988763
No 247
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1e-36 Score=334.24 Aligned_cols=272 Identities=15% Similarity=0.203 Sum_probs=202.9
Q ss_pred cCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-----------CCCcceeeeeeee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----------HRHLVSALGHCFE 544 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~NIv~l~g~~~~ 544 (786)
++|...+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|++++++++ |+||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4688889999999999999996 578999999987432 23467889999999886 8999999999875
Q ss_pred ccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec----
Q 003926 545 CYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD---- 620 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---- 620 (786)
.. ......++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++
T Consensus 98 ~~---~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 98 KG---PNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EE---TTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred cC---CCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 21 1234689999999 899999997632 245899999999999999999999842 899999999999994
Q ss_pred --CCCcccccCCCcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchh-------H
Q 003926 621 --QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEV-------D 691 (786)
Q Consensus 621 --~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~-------~ 691 (786)
..+.+||+|||++...... .....++..|+|||.+....++.++|||||||++|||+||+.||..... +
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcCcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 4558999999998655432 2334577889999999888899999999999999999999999975431 1
Q ss_pred HHHHHHHHHHHhcc----------------cccccccccc---------ccccCcHHHHHHHHHHHHHhccCCCCCCCCH
Q 003926 692 LLKNQLQAVVTADE----------------SARRSMVDPA---------VNKACLDESLKTMMEVCVRCLLKNPAERPSV 746 (786)
Q Consensus 692 ~~~~~~~~~~~~~~----------------~~~~~~~d~~---------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~ 746 (786)
.+............ .....+.... -....+......+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 11111111100000 0000000000 0012234566788899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003926 747 EDVLWNLQFAAQ 758 (786)
Q Consensus 747 ~evl~~l~~~~~ 758 (786)
.||++|+||.+.
T Consensus 329 ~ell~hp~f~~~ 340 (373)
T 1q8y_A 329 GGLVNHPWLKDT 340 (373)
T ss_dssp HHHHTCGGGTTC
T ss_pred HHHhhChhhhcc
Confidence 999999998764
No 248
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.1e-37 Score=332.25 Aligned_cols=249 Identities=16% Similarity=0.237 Sum_probs=199.8
Q ss_pred HHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC------ChHHHHHHHHHHhcCC--CCCcceeeeeeee
Q 003926 474 EATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH------STRNFMHHIELISKLR--HRHLVSALGHCFE 544 (786)
Q Consensus 474 ~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~ 544 (786)
...++|+..+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|++++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3456788899999999999999985 47899999999765432 2345788999999996 5999999999875
Q ss_pred ccccCCCCceEEEEEecCCC-CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec-CC
Q 003926 545 CYFDDSSVSRIFLIFEYVPN-GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD-QN 622 (786)
Q Consensus 545 ~~~~~~~~~~~~LV~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~ 622 (786)
.+..++||||+.+ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ ++
T Consensus 120 -------~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 120 -------PDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNR 186 (320)
T ss_dssp -------SSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTT
T ss_pred -------CCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCC
Confidence 4568999999986 8999999753 3589999999999999999999997 999999999999999 78
Q ss_pred CcccccCCCcccccccccccccccccccccCccccccCCC-CcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Q 003926 623 LVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKL-EEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVV 701 (786)
Q Consensus 623 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (786)
+.+||+|||++....... .....++..|+|||.+....+ +.++|||||||++|||++|+.||..... ..
T Consensus 187 ~~~kL~Dfg~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~---- 256 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----II---- 256 (320)
T ss_dssp TEEEECCCTTCEECCSSC-BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HH----
T ss_pred CCEEEeeCcccccccccc-ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----hh----
Confidence 999999999987654322 233457788999998876665 6889999999999999999999975321 00
Q ss_pred HhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 702 TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 702 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
. .. .... ...+ ..+.+++.+||+.||++|||+.||++|+|+...
T Consensus 257 ~-~~----~~~~----~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 257 R-GQ----VFFR----QRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300 (320)
T ss_dssp H-CC----CCCS----SCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred c-cc----cccc----ccCC----HHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence 0 00 0011 1112 346678889999999999999999999987653
No 249
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.3e-35 Score=355.87 Aligned_cols=261 Identities=31% Similarity=0.409 Sum_probs=183.1
Q ss_pred ccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCC
Q 003926 100 VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLP 179 (786)
Q Consensus 100 ~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 179 (786)
|..+.++++|++|+|++|.+++.+|..|+++++|+.|+|++|.+++.+|..+..+++|++|+|++|++++.+|..+.+++
T Consensus 411 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 490 (768)
T 3rgz_A 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred CHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC
Confidence 34455555566666666666555555555566666666666666555565555566666666666666555565566666
Q ss_pred CCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCcccc-----------
Q 003926 180 ILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGK----------- 247 (786)
Q Consensus 180 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~----------- 247 (786)
+|++|+|++|++++.+|..|+++++|+.|+|++|+++|.+|. +..+++|++|+|++|.++|.+|....
T Consensus 491 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 570 (768)
T 3rgz_A 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTT
T ss_pred CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcc
Confidence 666666666666655665555666666666666666555553 55556666666666655555553210
Q ss_pred --------------------------------------chhhhhccCCccCCcChhhhcCccccceeeccCccccCCCch
Q 003926 248 --------------------------------------KLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ 289 (786)
Q Consensus 248 --------------------------------------~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 289 (786)
.+..++++.|.+.|.+|..+..+++|+.|||++|+++|.+|.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~ 650 (768)
T 3rgz_A 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650 (768)
T ss_dssp CSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH
Confidence 011223344555555666666778899999999999999999
Q ss_pred hhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCCCCC
Q 003926 290 ALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGNE 360 (786)
Q Consensus 290 ~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~~~~ 360 (786)
.|+++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+..+..+++++|.++|..+
T Consensus 651 ~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 651 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred HHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998544
No 250
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.1e-37 Score=326.08 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=192.5
Q ss_pred HHHhcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCCC------ChHHHHHHHHHHhcC----CCCCcceeeee
Q 003926 473 EEATNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCH------STRNFMHHIELISKL----RHRHLVSALGH 541 (786)
Q Consensus 473 ~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l----~H~NIv~l~g~ 541 (786)
....++|...+.||+|+||.||+|+. .+++.||||+++..... ....+.+|+++++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34467899999999999999999985 46899999999755331 223467899999988 89999999998
Q ss_pred eeeccccCCCCceEEEEEec-CCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeec
Q 003926 542 CFECYFDDSSVSRIFLIFEY-VPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLD 620 (786)
Q Consensus 542 ~~~~~~~~~~~~~~~LV~Ey-~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 620 (786)
+.. .+..++|||| +++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 107 ~~~-------~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 173 (312)
T 2iwi_A 107 FET-------QEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILID 173 (312)
T ss_dssp C------------CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEE
T ss_pred Eec-------CCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEe
Confidence 764 3457999999 8999999999763 3589999999999999999999997 999999999999999
Q ss_pred -CCCcccccCCCcccccccccccccccccccccCccccccCCCC-cccceeehhHHHHHHHhCCCCCCCchhHHHHHHHH
Q 003926 621 -QNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLE-EKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ 698 (786)
Q Consensus 621 -~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t-~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~ 698 (786)
.++.+||+|||++....... .....++..|+|||......+. .++||||||+++|||++|+.||..... ..
T Consensus 174 ~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~- 246 (312)
T 2iwi_A 174 LRRGCAKLIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----IL- 246 (312)
T ss_dssp TTTTEEEECCCSSCEECCSSC-BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HH-
T ss_pred CCCCeEEEEEcchhhhcccCc-ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----Hh-
Confidence 88999999999987654322 2344577889999988766654 589999999999999999999975321 00
Q ss_pred HHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 699 AVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 699 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
... ....... ...+.+++.+||+.||++|||+.|+++|.|+..
T Consensus 247 ---~~~---------~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~ 289 (312)
T 2iwi_A 247 ---EAE---------LHFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289 (312)
T ss_dssp ---HTC---------CCCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred ---hhc---------cCCcccC----CHHHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence 000 0011111 234667888999999999999999999888654
No 251
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8e-36 Score=316.77 Aligned_cols=241 Identities=15% Similarity=0.249 Sum_probs=181.6
Q ss_pred cCCCcc-CccCCCCCceeEEEEe-cCCcEEEEEEecccCCCChHHHHHHHHHH-hcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTS-AFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKCHSTRNFMHHIELI-SKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~-~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l-~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|... +.||+|+||.||+|+. .+++.||||+++. ...+.+|++++ +..+||||+++++++.... ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~---~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY---AGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE---TTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhc---CCCc
Confidence 445555 7899999999999996 4689999999853 35678899988 6679999999999886421 1235
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecC---CCcccccCC
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQ---NLVAKISSY 630 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~Df 630 (786)
..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 6899999999999999998642 24689999999999999999999997 9999999999999998 788999999
Q ss_pred CcccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccc
Q 003926 631 NLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRS 710 (786)
Q Consensus 631 Gl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (786)
|++.... ...++.++|||||||++|||+||++||.......... .......
T Consensus 165 g~a~~~~---------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------~~~~~~~- 215 (299)
T 3m2w_A 165 GFAKETT---------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------GMKTRIR- 215 (299)
T ss_dssp TTCEECT---------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------CSCCSSC-
T ss_pred ccccccc---------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------HHHHHHh-
Confidence 9874321 1346779999999999999999999996543221100 0000000
Q ss_pred cccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 711 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 711 ~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.................+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263 (299)
T ss_dssp TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence 000000000001123457788889999999999999999999998764
No 252
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.8e-35 Score=311.62 Aligned_cols=230 Identities=14% Similarity=0.126 Sum_probs=177.9
Q ss_pred cCCCccCccCCCCCceeEEEEec-CCcEEEEEEecccCCCC---hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKCHS---TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
+.|...+.||+|+||.||+|+.. +|+.||||++....... .+.|.+|++++++++||||+++++++.. .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-------~ 103 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-------R 103 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------T
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-------C
Confidence 45888899999999999999975 58999999998654432 3679999999999999999999999875 3
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+||||+++|+|.+++... ....+...++.|++.||+|||+. +|+||||||+|||++.++.+||+++|.
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~ 175 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPAT 175 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCC
T ss_pred CcEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccc
Confidence 5689999999999999999642 35557888999999999999998 999999999999999999999985542
Q ss_pred ccccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccc
Q 003926 633 PLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMV 712 (786)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (786)
++ .++.++|||||||++|||+||+.||.......... ...........
T Consensus 176 -------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------~~~~~~~~~~~ 223 (286)
T 3uqc_A 176 -------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA------PAERDTAGQPI 223 (286)
T ss_dssp -------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE------ECCBCTTSCBC
T ss_pred -------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH------HHHHHhccCCC
Confidence 22 36889999999999999999999997543211000 00000000000
Q ss_pred cc-cccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 003926 713 DP-AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 758 (786)
Q Consensus 713 d~-~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~~ 758 (786)
.+ .... .....+.+++.+||+.||++| |+.|+++.|.....
T Consensus 224 ~~~~~~~----~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 224 EPADIDR----DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp CHHHHCT----TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred Chhhccc----CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00 0111 122356788889999999999 99999999986543
No 253
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3e-36 Score=334.64 Aligned_cols=256 Identities=13% Similarity=0.128 Sum_probs=187.0
Q ss_pred hcCCCccCccCCCCCceeEEEEe-cCCcEEEEEEecccCC---CChHHHHHHHHHHhcCCC-CCcceeeee---------
Q 003926 476 TNNFDTSAFMGEGSQGQMYRGRL-KNGTFVAIRCLKMKKC---HSTRNFMHHIELISKLRH-RHLVSALGH--------- 541 (786)
Q Consensus 476 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H-~NIv~l~g~--------- 541 (786)
+..|...+.||+|+||+||+|+. .+|+.||||++..... ...+.|.+|+.+++.++| +|......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34566778999999999999994 5799999999884432 235789999999999987 333222111
Q ss_pred eeecc-------ccC---CCCceEEEEEecCCCCChhHHhhc----CCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCc
Q 003926 542 CFECY-------FDD---SSVSRIFLIFEYVPNGTLRSWISE----GHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGV 607 (786)
Q Consensus 542 ~~~~~-------~~~---~~~~~~~LV~Ey~~~GsL~~~l~~----~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~i 607 (786)
+.... ... ......+++|+++ +|+|.+++.. ......++|..++.++.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 00000 000 0022357777766 5799998841 11234588999999999999999999997 99
Q ss_pred cccCCCCCceeecCCCcccccCCCcccccccccccccccccccccCcccc----------ccCCCCcccceeehhHHHHH
Q 003926 608 FSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNS----------ARGKLEEKIDIYDFGLILLE 677 (786)
Q Consensus 608 vHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~----------~~~~~t~ksDVwSfGvvl~E 677 (786)
+||||||+|||++.++.+||+|||+++..... .....+ ..|+|||.+ ....++.++|||||||++||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 99999999999999999999999998655432 233455 889999988 55568899999999999999
Q ss_pred HHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 003926 678 IIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA 757 (786)
Q Consensus 678 lltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~~ 757 (786)
|+||+.||........ ...++... ...+ ..+.+++.+||+.||++||++.|+++|+||.+
T Consensus 310 lltg~~Pf~~~~~~~~--------------~~~~~~~~--~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 310 IWCADLPNTDDAALGG--------------SEWIFRSC--KNIP----QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHHSSCCCCTTGGGSC--------------SGGGGSSC--CCCC----HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHCCCCCCCcchhhh--------------HHHHHhhc--ccCC----HHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 9999999975432111 00111100 1112 35678888999999999999999999999876
Q ss_pred H
Q 003926 758 Q 758 (786)
Q Consensus 758 ~ 758 (786)
.
T Consensus 370 ~ 370 (413)
T 3dzo_A 370 L 370 (413)
T ss_dssp H
T ss_pred H
Confidence 4
No 254
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.3e-35 Score=344.75 Aligned_cols=243 Identities=16% Similarity=0.238 Sum_probs=189.6
Q ss_pred cCCCccCccCCCCCceeEEEEec--CCcEEEEEEecccCC-CChHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCCc
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLK--NGTFVAIRCLKMKKC-HSTRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~--~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~~ 553 (786)
++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.|.+|++++++++|||||++++++..... ....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR--HGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT--TSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC--CCCc
Confidence 57888999999999999999975 689999999875432 234578999999999999999999999876321 1112
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..|+||||+++|+|.+++.. .++|.+++.++.|+++||.|||+. +||||||||+|||++.+ .+||+|||++
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 36999999999999988753 589999999999999999999997 99999999999999986 8999999998
Q ss_pred cccccccccccccccccccCccccccCCCCcccceeehhHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhcccccccccc
Q 003926 634 LLAENAEKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVD 713 (786)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 713 (786)
+..... ....++..|+|||.+..+ ++.++|||||||++|||++|.+|+....... +..
T Consensus 229 ~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------------~~~ 286 (681)
T 2pzi_A 229 SRINSF---GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG------------------LPE 286 (681)
T ss_dssp EETTCC---SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS------------------CCT
T ss_pred hhcccC---CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc------------------ccc
Confidence 765432 344578899999988654 5899999999999999999998875421100 000
Q ss_pred ccccccCcHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 003926 714 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA 756 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPt~~evl~~l~~~ 756 (786)
. .........+.+++.+||+.||++||+..+.+.+.++.
T Consensus 287 ~----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 287 D----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp T----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred c----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 00111234567888999999999999877777665543
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.7e-34 Score=306.83 Aligned_cols=231 Identities=26% Similarity=0.380 Sum_probs=208.5
Q ss_pred CCCCEEEccCCCCcc--CCCccCCCCCCCCEEeccC-CCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 107 PDLKVLRLVSLGLWG--PLSGKISRLSSLEILNMSS-NFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g--~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
.+++.|+|++|++.| .+|..|.++++|++|+|++ |.+++.+|..|+++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578899999999999 8899999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCC-cCCEEEcccCCCCCCCCccccchhhhhccCCccCC
Q 003926 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLT-YLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 184 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~-~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~ 261 (786)
|+|++|.+++.+|..|.++++|++|+|++|++++.+|. +..++ +|++|+|++|. +++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~---------------------l~~ 188 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR---------------------LTG 188 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE---------------------EEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe---------------------eec
Confidence 99999999999999999999999999999999987774 77776 77777776655 456
Q ss_pred cChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc
Q 003926 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (786)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 341 (786)
.+|..+..+. |+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|. +..+++|+.|++++|+++|.+|..+..
T Consensus 189 ~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 266 (313)
T 1ogq_A 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQ 266 (313)
T ss_dssp ECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhc
Confidence 7778888887 99999999999999999999999999999999999988776 788999999999999999999999999
Q ss_pred CCCCcEEEcCCcccCCCCC
Q 003926 342 GSKNRVVLYARNCLAAGNE 360 (786)
Q Consensus 342 ~~~~~~~~~~~N~l~~~~~ 360 (786)
..+++.+++++|.++|..+
T Consensus 267 l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 267 LKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp CTTCCEEECCSSEEEEECC
T ss_pred CcCCCEEECcCCcccccCC
Confidence 9999999999999987433
No 256
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=8e-34 Score=305.07 Aligned_cols=265 Identities=20% Similarity=0.228 Sum_probs=153.9
Q ss_pred CCHHHHHHHHHHHhcC-CCC-CCCCCC----CCCCCCCCCCCCCCccEEeC----------CCCEEEEEeCCCCCCCCCC
Q 003926 28 LQSSQAQTLLRIQGLL-NNP-AVLSSW----NITTEFCNTEPTSSLTVVCY----------EESITQLHIVGNKRAPMLP 91 (786)
Q Consensus 28 ~~~~~~~~ll~~k~~~-~~~-~~l~~W----~~~~~~C~w~~~~~~~v~c~----------~~~v~~l~l~~~~~~~~l~ 91 (786)
+..+|++||++||..+ .++ ..+.+| +...++|.|. |+.|. ..+|+.|+|+++.+. .+
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~-----g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~l- 96 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT-----GRALKATADLLEDATQPGRVALELRSVPLP-QF- 96 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSH-----HHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SC-
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccC-----CcchhhhHHHHhcccccceeEEEccCCCch-hc-
Confidence 5578999999999987 455 345778 4457889887 58883 145666666665543 22
Q ss_pred CCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCC
Q 003926 92 LSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRV 171 (786)
Q Consensus 92 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 171 (786)
|..+.++++|++|+|++|.+. .+|..|+++++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+
T Consensus 97 --------p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~ 166 (328)
T 4fcg_A 97 --------PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTEL 166 (328)
T ss_dssp --------CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCC
T ss_pred --------ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCcccc
Confidence 223445666666666666665 55556666666666666666665 55656666666666666666666666
Q ss_pred CcccCC---------CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCC
Q 003926 172 PDWLGS---------LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQF 242 (786)
Q Consensus 172 p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 242 (786)
|..+.. +++|++|+|++|.++ .+|..|+++++|+.|+|++|.+++.++.+..+++|++|+|++|++
T Consensus 167 p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~---- 241 (328)
T 4fcg_A 167 PEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTA---- 241 (328)
T ss_dssp CSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTT----
T ss_pred ChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcc----
Confidence 655443 555555555555555 445555555555555555555554444444444454444444433
Q ss_pred CccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCC
Q 003926 243 PKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELG 322 (786)
Q Consensus 243 p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~ 322 (786)
.+.+|..+..+++|+.|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..+..+++|+
T Consensus 242 -----------------~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~ 304 (328)
T 4fcg_A 242 -----------------LRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304 (328)
T ss_dssp -----------------CCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTC
T ss_pred -----------------hhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCce
Confidence 234444455555555555555555555555555555555555555555555555555555555
Q ss_pred EEeCcCCcC
Q 003926 323 FVDLSSNLL 331 (786)
Q Consensus 323 ~l~ls~N~l 331 (786)
.+++..|.+
T Consensus 305 ~l~l~~~~~ 313 (328)
T 4fcg_A 305 IILVPPHLQ 313 (328)
T ss_dssp EEECCGGGS
T ss_pred EEeCCHHHH
Confidence 555554444
No 257
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.8e-32 Score=308.85 Aligned_cols=274 Identities=23% Similarity=0.228 Sum_probs=217.0
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCC-CccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPL-SGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
+++.|+|++|.+.+..|. .+.++++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|++
T Consensus 31 ~l~~L~Ls~n~i~~~~~~---------~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 101 (455)
T 3v47_A 31 HVNYVDLSLNSIAELNET---------SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNG 101 (455)
T ss_dssp TCCEEECCSSCCCEECTT---------TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTT
T ss_pred ccCEEEecCCccCcCChh---------HhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccC
Confidence 588999999887765443 4557778888888888777555 456777888888888888887777777888
Q ss_pred CCCCcEEEcccccCCCCCCcc--cCCCCCCCEEEccCCcCcccCCcc-ccCCCCCCEEEccCCcCCcCCCC-CC------
Q 003926 154 LTSLQTLILDENMLAGRVPDW--LGSLPILAVLSLRNNMFNGTLPDS-FSYLENLRVLALSNNHFYGEVPD-FS------ 223 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~-~~------ 223 (786)
+++|++|+|++|.+++.+|.. |..+++|++|+|++|.+++..|.. |.++++|++|+|++|.+++..+. +.
T Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~ 181 (455)
T 3v47_A 102 LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKH 181 (455)
T ss_dssp CTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCE
T ss_pred cccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccc
Confidence 888888888888877655544 777788888888888887776765 67778888888888877766553 22
Q ss_pred ----------------------------CCCcCCEEEcccCCCCCCCCcc------------------------------
Q 003926 224 ----------------------------GLTYLQVLDLENNALGPQFPKV------------------------------ 245 (786)
Q Consensus 224 ----------------------------~l~~L~~L~L~~N~l~~~~p~~------------------------------ 245 (786)
.+++|+.|+|++|.+++..|..
T Consensus 182 L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 261 (455)
T 3v47_A 182 FTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNF 261 (455)
T ss_dssp EEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSS
T ss_pred ccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhh
Confidence 3367888888888775432210
Q ss_pred ------------ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCc
Q 003926 246 ------------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313 (786)
Q Consensus 246 ------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~ 313 (786)
..+|+.|++++|.+++.+|..+..+++|+.|+|++|++.+..|..|.++++|+.|+|++|++++..|.
T Consensus 262 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 341 (455)
T 3v47_A 262 KDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSR 341 (455)
T ss_dssp CCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGG
T ss_pred ccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChh
Confidence 13688888999999888898999999999999999999988888999999999999999999888888
Q ss_pred cCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 314 DLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 314 ~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+..+++|+.|+|++|++++..|..+..+.+++.+++++|.+++
T Consensus 342 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 342 MFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp GGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred HhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 88899999999999999998888888888899999999998876
No 258
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.3e-33 Score=305.08 Aligned_cols=253 Identities=14% Similarity=0.119 Sum_probs=186.8
Q ss_pred cCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--------CChHHHHHHHHHHhcCC---------CCCcceee
Q 003926 477 NNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--------HSTRNFMHHIELISKLR---------HRHLVSAL 539 (786)
Q Consensus 477 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~---------H~NIv~l~ 539 (786)
++|+..+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|++++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4567789999999999999998 689999999986532 22378999999999886 77777777
Q ss_pred eeeeecc-------------cc----------CCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHh
Q 003926 540 GHCFECY-------------FD----------DSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGI 596 (786)
Q Consensus 540 g~~~~~~-------------~~----------~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL 596 (786)
+.+.... .. ....+..|+|||||++|++.+.+.+ ..+++.....++.|++.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 6543110 00 0014578999999999987776643 3589999999999999999
Q ss_pred hhhh-cCCCCCccccCCCCCceeecCCC--------------------cccccCCCcccccccccccccccccccccCcc
Q 003926 597 QFLH-TGIVPGVFSNNLKITDILLDQNL--------------------VAKISSYNLPLLAENAEKVGHVIPYSGSIDPT 655 (786)
Q Consensus 597 ~yLH-~~~~~~ivHrdlk~~NILld~~~--------------------~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe 655 (786)
+||| +. +|+||||||+|||++.++ .+||+|||+++..... ...++..|+|||
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE 247 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDED 247 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSG
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChh
Confidence 9999 76 999999999999999887 8999999999765432 346788899999
Q ss_pred ccccCCCCcccceeehhHH-HHHHHhCCCCCCCchhHHHHHHHHHHHHhccccccccccccccccCcHHHHHHHHHHHHH
Q 003926 656 NSARGKLEEKIDIYDFGLI-LLEIIVGRPLKSRKEVDLLKNQLQAVVTADESARRSMVDPAVNKACLDESLKTMMEVCVR 734 (786)
Q Consensus 656 ~~~~~~~t~ksDVwSfGvv-l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~ 734 (786)
.+.+.. +.++||||+|++ .+++++|..||..... ............ . ...............++.+++.+
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~--~----~~~~~~~~~~~~~s~~~~dli~~ 318 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLTDKMLKQM--T----FKTKCNTPAMKQIKRKIQEFHRT 318 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHHHHHHHTC--C----CSSCCCSHHHHHHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcchhh--hhHHHHhhhhhh--c----cCcccchhhhhhcCHHHHHHHHH
Confidence 987554 899999998777 7888999998843211 000111111100 0 00111111234556778899999
Q ss_pred hccCCCCCCCCHHHHH-HHHHH
Q 003926 735 CLLKNPAERPSVEDVL-WNLQF 755 (786)
Q Consensus 735 Cl~~dP~~RPt~~evl-~~l~~ 755 (786)
||+.| |+.|++ +|+||
T Consensus 319 ~L~~d-----sa~e~l~~Hp~f 335 (336)
T 2vuw_A 319 MLNFS-----SATDLLCQHSLF 335 (336)
T ss_dssp GGGSS-----SHHHHHHHCGGG
T ss_pred HhccC-----CHHHHHhcCCCc
Confidence 99976 999999 89886
No 259
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=301.88 Aligned_cols=274 Identities=19% Similarity=0.119 Sum_probs=204.0
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|+|++|.+.+..+. .+.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++
T Consensus 33 ~l~~L~L~~n~l~~~~~~---------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 103 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQD---------EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 103 (477)
T ss_dssp TCSEEECCSSCCCEECTT---------TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTC
T ss_pred CCcEEECCCCccceECHh---------HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCC
Confidence 567788888776654443 45678888888888888888888888888888888888888887766777888
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEc
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDL 233 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L 233 (786)
++|++|+|++|.+++..|..|..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|.+++..+. |..+++|+.|+|
T Consensus 104 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 183 (477)
T 2id5_A 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEE
T ss_pred CCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeC
Confidence 8888888888888888888888888888888888888887788888888888888888888765553 777788888888
Q ss_pred ccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcc
Q 003926 234 ENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310 (786)
Q Consensus 234 ~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 310 (786)
++|.+.+..+.. .++|+.|++++|.+.+.+|..+....+|+.|+|++|++++..+..+.++++|+.|+|++|++++.
T Consensus 184 ~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 263 (477)
T 2id5_A 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI 263 (477)
T ss_dssp ESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCcc
Confidence 888776654432 35667777777766666666655555677777777777655445667777777777777777766
Q ss_pred cCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 311 LFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 311 ~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+..+..+++|+.|+|++|++++..|..+..+.+++.+++++|.+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 264 EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC
T ss_pred ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce
Confidence 66666667777777777777776666666666667777777776654
No 260
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=9.8e-31 Score=304.59 Aligned_cols=249 Identities=22% Similarity=0.223 Sum_probs=215.8
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+.++++|++|+|++|.+.+..|..|+++++|+.|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|+
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 150 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC
Confidence 56789999999999999999888999999999999999999998888899999999999999999976667789999999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCc-------------------CCEEEcccCCCCCCCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTY-------------------LQVLDLENNALGPQFP 243 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~-------------------L~~L~L~~N~l~~~~p 243 (786)
+|+|++|.+++..|..|+++++|+.|+|++|.+++.. +..+++ |+.|++++|.++...+
T Consensus 151 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~ 228 (597)
T 3oja_B 151 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 228 (597)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEEC
T ss_pred EEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheeeccCCccccccc
Confidence 9999999999988888999999999999999998753 233344 5555555555544444
Q ss_pred ccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCE
Q 003926 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323 (786)
Q Consensus 244 ~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~ 323 (786)
....+|+.|+|++|.+++ +..+..+++|+.|+|++|.+.+.+|..|..+++|+.|+|++|++++ +|..+..+++|+.
T Consensus 229 ~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~ 305 (597)
T 3oja_B 229 PVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKV 305 (597)
T ss_dssp SCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCE
T ss_pred ccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcE
Confidence 445679999999999987 3678999999999999999999999999999999999999999997 4667778999999
Q ss_pred EeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 324 VDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 324 l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|+|++|.++ .+|..+..+..+..+++++|.+.+
T Consensus 306 L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 306 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp EECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred EECCCCCCC-ccCcccccCCCCCEEECCCCCCCC
Confidence 999999999 688888888999999999999876
No 261
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=2.6e-30 Score=291.16 Aligned_cols=252 Identities=21% Similarity=0.206 Sum_probs=229.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCC-CccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI-PQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 68999999999999999999999999999999999998666 56799999999999999999999999999999999999
Q ss_pred ccCCcCcccCCcc--ccCCCCCCEEEccCCcCCcCCCC--CCCCCcCCEEEcccCCCCCCCCccc---------------
Q 003926 186 LRNNMFNGTLPDS--FSYLENLRVLALSNNHFYGEVPD--FSGLTYLQVLDLENNALGPQFPKVG--------------- 246 (786)
Q Consensus 186 Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L~~L~L~~N~l~~~~p~~~--------------- 246 (786)
|++|.+++.+|.. |.++++|++|+|++|.+++..|. +.++++|++|+|++|.+++..+...
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866655 99999999999999999998776 8899999999999999987766422
Q ss_pred ----------------------cchhhhhccCCccCCcChhhhcCc----------------------------------
Q 003926 247 ----------------------KKLVTMILSKNKFRSAIPAEVSSY---------------------------------- 270 (786)
Q Consensus 247 ----------------------~~L~~L~ls~N~l~~~~p~~~~~l---------------------------------- 270 (786)
++|+.|++++|++++.+|..+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 468889999999888777655322
Q ss_pred -----cccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCC
Q 003926 271 -----YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345 (786)
Q Consensus 271 -----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 345 (786)
++|+.|+|++|++.+.+|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..|..+..+.++
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 579999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred cEEEcCCcccCCC
Q 003926 346 RVVLYARNCLAAG 358 (786)
Q Consensus 346 ~~~~~~~N~l~~~ 358 (786)
+.+++++|.+.+.
T Consensus 350 ~~L~Ls~N~l~~~ 362 (455)
T 3v47_A 350 EVLDLSYNHIRAL 362 (455)
T ss_dssp CEEECCSSCCCEE
T ss_pred CEEECCCCccccc
Confidence 9999999998763
No 262
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=3.8e-30 Score=283.74 Aligned_cols=249 Identities=22% Similarity=0.224 Sum_probs=211.3
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+.++++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|.++++|+
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 56789999999999999988888999999999999999999988888899999999999999999865555679999999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCc-------------------CCEEEcccCCCCCCCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTY-------------------LQVLDLENNALGPQFP 243 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~-------------------L~~L~L~~N~l~~~~p 243 (786)
+|+|++|.+++..|..|.++++|+.|++++|.+++.. +..+++ |+.|++++|.+.....
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~ 222 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 222 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEEC
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCCcceEEECCCCeeeeccc
Confidence 9999999999888888999999999999999988642 333344 5555555555544433
Q ss_pred ccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCE
Q 003926 244 KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323 (786)
Q Consensus 244 ~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~ 323 (786)
....+|+.|++++|.+++. ..+..+++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++ +|..+..+++|+.
T Consensus 223 ~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~ 299 (390)
T 3o6n_A 223 PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKV 299 (390)
T ss_dssp CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCE
T ss_pred cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCE
Confidence 3446789999999999874 578899999999999999999889999999999999999999987 4566678899999
Q ss_pred EeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 324 VDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 324 l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|++++|+++ .+|..+..+.+++.+++++|.+..
T Consensus 300 L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 300 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp EECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred EECCCCcce-ecCccccccCcCCEEECCCCccce
Confidence 999999998 567777888899999999999875
No 263
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=8.6e-31 Score=306.93 Aligned_cols=280 Identities=19% Similarity=0.210 Sum_probs=241.4
Q ss_pred CCCEEEEEeCCCCCCCC-CCCCCcCC-------ccccccC--CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCC
Q 003926 73 EESITQLHIVGNKRAPM-LPLSFSMD-------SFVTTLV--KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF 142 (786)
Q Consensus 73 ~~~v~~l~l~~~~~~~~-l~~~~~~~-------~~~~~l~--~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~ 142 (786)
-.+++.|+|++|.+++. ++..+... .+|..++ ++++|++|+|++|.+.|.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 35789999999998873 22222111 1667888 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCccccCC------CCCcEEEcccccCCCCCCc--ccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccC
Q 003926 143 -LNG-AIPQELSIL------TSLQTLILDENMLAGRVPD--WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN 212 (786)
Q Consensus 143 -l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 212 (786)
++| .+|..++++ ++|++|+|++|+++ .+|. .|+++++|++|+|++|.++|.+| .|+++++|+.|+|++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 998 899998887 99999999999999 8998 99999999999999999999999 999999999999999
Q ss_pred CcCCcCCCCCCCCCc-CCEEEcccCCCCCCCCccc-----cchhhhhccCCccCCcChhhhc-------Cccccceeecc
Q 003926 213 NHFYGEVPDFSGLTY-LQVLDLENNALGPQFPKVG-----KKLVTMILSKNKFRSAIPAEVS-------SYYQLQRLDLS 279 (786)
Q Consensus 213 N~l~~~~p~~~~l~~-L~~L~L~~N~l~~~~p~~~-----~~L~~L~ls~N~l~~~~p~~~~-------~l~~L~~L~Ls 279 (786)
|+++..+..+..+++ |++|+|++|.++ .+|... .+|+.|++++|.+++.+|..+. .+.+|+.|+|+
T Consensus 363 N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls 441 (636)
T 4eco_A 363 NQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLS 441 (636)
T ss_dssp SEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECC
T ss_pred CccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECc
Confidence 999954446999999 999999999998 566542 3799999999999999999888 78899999999
Q ss_pred CccccCCCchhhCCCCCCcEEEeecCCCCcccCccC-CCC-------CCCCEEeCcCCcCCccCChhhh--cCCCCcEEE
Q 003926 280 SNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDL-SCN-------PELGFVDLSSNLLTGQLPNCLL--AGSKNRVVL 349 (786)
Q Consensus 280 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~-~~~-------~~L~~l~ls~N~l~g~~p~~~~--~~~~~~~~~ 349 (786)
+|++++..+..+..+++|+.|+|++|+++ .+|... ... ++|+.|+|++|+++ .+|..+. .+.+++.++
T Consensus 442 ~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~ 519 (636)
T 4eco_A 442 NNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGID 519 (636)
T ss_dssp SSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEE
T ss_pred CCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEE
Confidence 99999554455667999999999999999 555443 322 28999999999999 7888887 888999999
Q ss_pred cCCcccCC
Q 003926 350 YARNCLAA 357 (786)
Q Consensus 350 ~~~N~l~~ 357 (786)
+++|.+++
T Consensus 520 Ls~N~l~~ 527 (636)
T 4eco_A 520 LSYNSFSK 527 (636)
T ss_dssp CCSSCCSS
T ss_pred CCCCCCCC
Confidence 99999886
No 264
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=1.2e-29 Score=296.54 Aligned_cols=282 Identities=21% Similarity=0.213 Sum_probs=189.8
Q ss_pred CEEEEEeCCCCCCCCCCCCCc-----------CC---cc-ccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEecc
Q 003926 75 SITQLHIVGNKRAPMLPLSFS-----------MD---SF-VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMS 139 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~-----------~~---~~-~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls 139 (786)
+++.|++++|.+.+..+..|. .+ .+ +..+.++++|++|+|++|.+.+..|..|+++++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 688999999987765553221 11 12 3456777788888888888877777778888888888888
Q ss_pred CCCCCCCCCccccCCCCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCC---------------
Q 003926 140 SNFLNGAIPQELSILTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE--------------- 203 (786)
Q Consensus 140 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--------------- 203 (786)
+|.+++..|..++++++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++..|..|+.++
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~ 192 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC
Confidence 888877776777888888888888888765 5677788888888888888777765554332222
Q ss_pred --------------------------------------------------------------------------------
Q 003926 204 -------------------------------------------------------------------------------- 203 (786)
Q Consensus 204 -------------------------------------------------------------------------------- 203 (786)
T Consensus 193 l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 272 (606)
T 3vq2_A 193 IDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTN 272 (606)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCT
T ss_pred cceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccc
Confidence
Q ss_pred -----------------------------------CCCEEEccCCcCCcCCCC---------------------CCCCCc
Q 003926 204 -----------------------------------NLRVLALSNNHFYGEVPD---------------------FSGLTY 227 (786)
Q Consensus 204 -----------------------------------~L~~L~Ls~N~l~~~~p~---------------------~~~l~~ 227 (786)
+|+.|++++|.+ +.+|. +..+++
T Consensus 273 ~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~ 351 (606)
T 3vq2_A 273 DFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPS 351 (606)
T ss_dssp TCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTT
T ss_pred cccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCC
Confidence 122222222222 11111 112233
Q ss_pred CCEEEcccCCCCCCC--C-----------------------c---cccchhhhhccCCccCCcCh-hhhcCccccceeec
Q 003926 228 LQVLDLENNALGPQF--P-----------------------K---VGKKLVTMILSKNKFRSAIP-AEVSSYYQLQRLDL 278 (786)
Q Consensus 228 L~~L~L~~N~l~~~~--p-----------------------~---~~~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L 278 (786)
|++|++++|.+++.. | . ..++|+.|++++|++++..| ..+.++++|+.|+|
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 431 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDI 431 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEEC
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEEC
Confidence 444444444332210 1 0 12456677777777777766 57778888888888
Q ss_pred cCccccCCCchhhCCCCCCcEEEeecCCCCc-ccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTG-KLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 279 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++|++.+..|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|++++..|..+..+.+++.+++++|.+++
T Consensus 432 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 511 (606)
T 3vq2_A 432 SYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLF 511 (606)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCC
Confidence 8888888788888888888888888888877 367777788888888888888887777777777788888888887765
No 265
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=1.2e-29 Score=296.36 Aligned_cols=272 Identities=21% Similarity=0.162 Sum_probs=208.9
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
+++.|+++++.+.+..+. .+.++++|++|+|++|.++ .+|..+.++++|++|+|++|.+++..|..+.++
T Consensus 255 ~L~~L~l~~n~l~~~~~~---------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 324 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSN---------TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNF 324 (606)
T ss_dssp EEEEEECTTCCCSSCCTT---------TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGC
T ss_pred ceeEEEeecCccCccCHH---------HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhcc
Confidence 688889988877654443 3557788888888888876 567777888888888888888887777778888
Q ss_pred CCCcEEEcccccCCCCCCc-ccCCCCCCCEEEccCCcCcccC--CccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCE
Q 003926 155 TSLQTLILDENMLAGRVPD-WLGSLPILAVLSLRNNMFNGTL--PDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQV 230 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~ 230 (786)
++|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. |..+.++++|+.|++++|.+++..|. |..+++|+.
T Consensus 325 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 8888888888887766664 4778888888888888887665 66778888888888888888776664 777788888
Q ss_pred EEcccCCCCCCCCcc----ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCC---CchhhCCCCCCcEEEee
Q 003926 231 LDLENNALGPQFPKV----GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGP---FPQALLSLPSITYLNIA 303 (786)
Q Consensus 231 L~L~~N~l~~~~p~~----~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~l~ 303 (786)
|++++|.+.+..+.. .++|+.|++++|.+++..|..+..+++|+.|+|++|++.+. .+..+..+++|+.|+++
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls 484 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECT
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECC
Confidence 888888877665432 36778888888888877777788888888888888887762 33567778888888888
Q ss_pred cCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 304 ~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+|++++..|..+..+++|+.|+|++|++++..|..+.....+ .+++++|.+++
T Consensus 485 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~ 537 (606)
T 3t6q_A 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISI 537 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCC
T ss_pred CCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccc
Confidence 888887777778888888888888888888777777777777 78888887775
No 266
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=3.2e-29 Score=294.17 Aligned_cols=302 Identities=24% Similarity=0.271 Sum_probs=213.7
Q ss_pred CCCCCCCCC----CCCCCCCCCCccEEeCC-----------CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEE
Q 003926 48 VLSSWNITT----EFCNTEPTSSLTVVCYE-----------ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVL 112 (786)
Q Consensus 48 ~l~~W~~~~----~~C~w~~~~~~~v~c~~-----------~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L 112 (786)
.+++|+.+. ++|.+. .....|.|.. ..++.|+|++|.++...+. .|.++++|++|
T Consensus 12 ~~~~~~~~~p~~~~~c~~~-~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~---------~f~~l~~L~~L 81 (635)
T 4g8a_A 12 KLAAANSSIPESWEPCVEV-VPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSY---------SFFSFPELQVL 81 (635)
T ss_dssp -------------CCSEEE-ETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTT---------TTTTCTTCCEE
T ss_pred hhhcccCCCCCCCCCcccc-CCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHH---------HHhCCCCCCEE
Confidence 566675432 234332 1234688953 2578999999987755443 45678888888
Q ss_pred EccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc
Q 003926 113 RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192 (786)
Q Consensus 113 ~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 192 (786)
+|++|++++..|++|.+|++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|.++
T Consensus 82 ~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~ 161 (635)
T 4g8a_A 82 DLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 161 (635)
T ss_dssp ECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccc
Confidence 88888888877788888888888888888888777777888888888888888888776677888888888888888876
Q ss_pred c-cCCccccCCCCCCEEEccCCcCCcCCCC-C------------------------------------------------
Q 003926 193 G-TLPDSFSYLENLRVLALSNNHFYGEVPD-F------------------------------------------------ 222 (786)
Q Consensus 193 ~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~------------------------------------------------ 222 (786)
+ .+|..++++++|++|+|++|++++..+. |
T Consensus 162 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~ 241 (635)
T 4g8a_A 162 SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVM 241 (635)
T ss_dssp CCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHH
T ss_pred cCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccccccccc
Confidence 5 3567777888888888887776442110 0
Q ss_pred --------------------------------------------------------------------------------
Q 003926 223 -------------------------------------------------------------------------------- 222 (786)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (786)
T Consensus 242 ~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 321 (635)
T 4g8a_A 242 KTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV 321 (635)
T ss_dssp HHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC
T ss_pred chhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc
Confidence
Q ss_pred ----------------------------------------------CCCCcCCEEEcccCCCCCC--CC-----------
Q 003926 223 ----------------------------------------------SGLTYLQVLDLENNALGPQ--FP----------- 243 (786)
Q Consensus 223 ----------------------------------------------~~l~~L~~L~L~~N~l~~~--~p----------- 243 (786)
..+++|+.|++++|.+... .+
T Consensus 322 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~ 401 (635)
T 4g8a_A 322 KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKY 401 (635)
T ss_dssp GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCE
T ss_pred cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhh
Confidence 0122334444444433100 00
Q ss_pred ----------------------------------------ccccchhhhhccCCccCCcChhhhcCccccceeeccCccc
Q 003926 244 ----------------------------------------KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRF 283 (786)
Q Consensus 244 ----------------------------------------~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 283 (786)
....++..++++.|.+.+..|..+..++.|+.|+|++|++
T Consensus 402 L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~ 481 (635)
T 4g8a_A 402 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 481 (635)
T ss_dssp EECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred hhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhccc
Confidence 0012345566777888888888888888899999998875
Q ss_pred -cCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCCCC
Q 003926 284 -VGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAGN 359 (786)
Q Consensus 284 -~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~~~ 359 (786)
.+.+|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+++++.+++++|.+++..
T Consensus 482 ~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 558 (635)
T 4g8a_A 482 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 558 (635)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCC
T ss_pred ccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCC
Confidence 4457788888899999999999999888888888899999999999998888888888888889999999888743
No 267
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=3.3e-29 Score=303.25 Aligned_cols=285 Identities=19% Similarity=0.186 Sum_probs=212.3
Q ss_pred CCCEEEEEeCCCCCCCCCCCCCc---------------CCcc-ccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEE
Q 003926 73 EESITQLHIVGNKRAPMLPLSFS---------------MDSF-VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEIL 136 (786)
Q Consensus 73 ~~~v~~l~l~~~~~~~~l~~~~~---------------~~~~-~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L 136 (786)
..+++.|+|++|.+++..|..|. ...+ +..+.++++|++|+|++|.+.+..|..|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 35788999999887765554321 1122 3456666777777777777766666667777777777
Q ss_pred eccCCCCCCCCCcc--ccCCCCCcEEEcccccCCCCCC-cccCCCCCCCEEEccCCcCcccCCccccCC--CCCCEEEcc
Q 003926 137 NMSSNFLNGAIPQE--LSILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNNMFNGTLPDSFSYL--ENLRVLALS 211 (786)
Q Consensus 137 ~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls 211 (786)
+|++|.+++.+|.. |.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..|..+ ++|+.|+|+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 77777776655544 6667777777777777665544 456677777777777777766666666665 667777777
Q ss_pred CCcCCcCCCC-CCCCCc------CCEEEcccCCCCCCCCcc---------------------------------------
Q 003926 212 NNHFYGEVPD-FSGLTY------LQVLDLENNALGPQFPKV--------------------------------------- 245 (786)
Q Consensus 212 ~N~l~~~~p~-~~~l~~------L~~L~L~~N~l~~~~p~~--------------------------------------- 245 (786)
+|.+++..|. +..+.+ |+.|+|++|.+++..+..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 7766665543 444433 888888888776544421
Q ss_pred --ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCE
Q 003926 246 --GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGF 323 (786)
Q Consensus 246 --~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~ 323 (786)
..+|+.|++++|.+.+..|..|..+++|+.|+|++|++.+..|..|..+++|+.|+|++|++++..|..+..+++|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 146788899999998888888999999999999999999888889999999999999999999888889999999999
Q ss_pred EeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 324 VDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 324 l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|++++|.+++..+..+..+.+++.+++++|.+++
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 9999999988777778888899999999998875
No 268
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=2.1e-29 Score=294.36 Aligned_cols=273 Identities=20% Similarity=0.153 Sum_probs=224.5
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|++++|.+++..|. .+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~---------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 104 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNT---------TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGP 104 (606)
T ss_dssp TCCEEECTTCCCSEECTT---------TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSC
T ss_pred cCcEEEccCCccCcCChh---------HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhccc
Confidence 578888888887755443 56688999999999999998889999999999999999999998888899999
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCC--EE
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQ--VL 231 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~--~L 231 (786)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++..++.+..+++|+.|++++|.+++..|. |..+++|+ .|
T Consensus 105 ~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L 184 (606)
T 3t6q_A 105 KALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSL 184 (606)
T ss_dssp TTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEE
T ss_pred ccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEE
Confidence 9999999999999877778889999999999999999875444555589999999999999877664 77888888 88
Q ss_pred EcccCCCCCCCCcccc------------------------------------------------------chhhhhccCC
Q 003926 232 DLENNALGPQFPKVGK------------------------------------------------------KLVTMILSKN 257 (786)
Q Consensus 232 ~L~~N~l~~~~p~~~~------------------------------------------------------~L~~L~ls~N 257 (786)
++++|.+.+..|.... +|+.|++++|
T Consensus 185 ~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n 264 (606)
T 3t6q_A 185 NLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKH 264 (606)
T ss_dssp ECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTC
T ss_pred ecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecC
Confidence 8999988765553211 5677788888
Q ss_pred ccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCCh
Q 003926 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPN 337 (786)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~ 337 (786)
.+++..+..|.++++|++|+|++|+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+.+|.
T Consensus 265 ~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 265 YFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT 343 (606)
T ss_dssp CCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS
T ss_pred ccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch
Confidence 888877777888888888888888887 6777888888888888888888888788888888888888888888877766
Q ss_pred h-hhcCCCCcEEEcCCcccCC
Q 003926 338 C-LLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 338 ~-~~~~~~~~~~~~~~N~l~~ 357 (786)
. +..+.+++.+++++|.+.+
T Consensus 344 ~~~~~l~~L~~L~l~~n~l~~ 364 (606)
T 3t6q_A 344 GCLENLENLRELDLSHDDIET 364 (606)
T ss_dssp STTTTCTTCCEEECCSSCCCE
T ss_pred hhhhccCcCCEEECCCCcccc
Confidence 4 6677788888888887765
No 269
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.6e-28 Score=264.40 Aligned_cols=246 Identities=21% Similarity=0.247 Sum_probs=219.0
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+. ++|+.|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 67899999999999998889999999999999999999998999999999999999999998 5666554 79999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCc--CCC-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYG--EVP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
++|.+++..+..|.++++|+.|++++|.++. ..+ .+.++++|++|++++|.++.......++|+.|++++|.+++..
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 208 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccC
Confidence 9999998888889999999999999999964 444 4889999999999999998765555689999999999999999
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc--
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA-- 341 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~-- 341 (786)
|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+..
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~ 287 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc
Confidence 999999999999999999999988889999999999999999999 77888999999999999999999766555532
Q ss_pred ----CCCCcEEEcCCcccC
Q 003926 342 ----GSKNRVVLYARNCLA 356 (786)
Q Consensus 342 ----~~~~~~~~~~~N~l~ 356 (786)
...+..+.+.+|.+.
T Consensus 288 ~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 288 YNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CCTTSCCCSEEECCSSSSC
T ss_pred cccccccccceEeecCccc
Confidence 245678888888765
No 270
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=1.3e-28 Score=265.20 Aligned_cols=245 Identities=23% Similarity=0.245 Sum_probs=215.9
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 68999999999999988889999999999999999999988999999999999999999998 5666555 89999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCc--CCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYG--EVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
++|.+++..+..|.++++|+.|++++|.++. ..+. +..+ +|+.|++++|.+++......++|+.|++++|.+++..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 9999998777779999999999999999963 4443 6677 9999999999998865556689999999999999988
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC-
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG- 342 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~- 342 (786)
|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++++..+..+...
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 288 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG 288 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccc
Confidence 899999999999999999999988889999999999999999999 678889999999999999999997666655432
Q ss_pred -----CCCcEEEcCCcccC
Q 003926 343 -----SKNRVVLYARNCLA 356 (786)
Q Consensus 343 -----~~~~~~~~~~N~l~ 356 (786)
..+..+.+.+|.+.
T Consensus 289 ~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 289 FGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CCSSSCCBSEEECCSSSSC
T ss_pred cccccccccceEeecCccc
Confidence 45678999998875
No 271
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=1.2e-28 Score=265.52 Aligned_cols=264 Identities=21% Similarity=0.240 Sum_probs=224.7
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|++++|.+....| ..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+.
T Consensus 55 ~l~~L~l~~n~i~~~~~---------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~-- 122 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRK---------DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP-- 122 (332)
T ss_dssp TCCEEECCSSCCCEECT---------TTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--
T ss_pred CCeEEECCCCcCCccCH---------hHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--
Confidence 46677777766554333 35779999999999999999999999999999999999999998 5666554
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc--ccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEE
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLD 232 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ 232 (786)
++|++|+|++|++++..+..|..+++|+.|++++|.++ +..|..|..+ +|+.|++++|.+++.+..+. ++|++|+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELH 199 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCB
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEE
Confidence 89999999999999877788999999999999999996 4778889888 99999999999997554443 7999999
Q ss_pred cccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 233 LENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 233 L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
|++|.+++..+.. .++|+.|++++|++++..|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 9999999877654 468999999999999988889999999999999999999 788889999999999999999998
Q ss_pred ccCccCCC------CCCCCEEeCcCCcCC--ccCChhhhcCCCCcEEEcCCcc
Q 003926 310 KLFDDLSC------NPELGFVDLSSNLLT--GQLPNCLLAGSKNRVVLYARNC 354 (786)
Q Consensus 310 ~~~~~~~~------~~~L~~l~ls~N~l~--g~~p~~~~~~~~~~~~~~~~N~ 354 (786)
..+..+.. .+.|+.|++++|.+. +..|..+..+..++.+++++|.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 279 VGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 87776654 367899999999998 5667777777888888887763
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=4.8e-29 Score=267.81 Aligned_cols=228 Identities=24% Similarity=0.270 Sum_probs=203.9
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
..+.++.|+|++|++. .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 4578999999999998 67888999999999999999999 88999999999999999999998 889999999999999
Q ss_pred EccCCcCcccCCccccC---------CCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhcc
Q 003926 185 SLRNNMFNGTLPDSFSY---------LENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILS 255 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls 255 (786)
+|++|.+.+.+|..+.. +++|+.|+|++|.++..+..+..+++|++|+|++|.++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~---------------- 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS---------------- 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC----------------
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC----------------
Confidence 99999999999987765 88888888888888843335778888888888777663
Q ss_pred CCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccC
Q 003926 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL 335 (786)
Q Consensus 256 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~ 335 (786)
.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.|.+
T Consensus 220 ------~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 220 ------ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRL 293 (328)
T ss_dssp ------CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCC
T ss_pred ------cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhc
Confidence 25567888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhcCCCCcEEEcCCcccCC
Q 003926 336 PNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 336 p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|..+..++++..+.+..|.+..
T Consensus 294 P~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 294 PSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CGGGGGSCTTCEEECCGGGSCC
T ss_pred cHHHhhccCceEEeCCHHHHHH
Confidence 9999999999999998776643
No 273
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=3.7e-29 Score=298.53 Aligned_cols=262 Identities=23% Similarity=0.319 Sum_probs=130.4
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCC-Ccc-CCCccCCCCC-------CCCEEeccCCCCC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLG-LWG-PLSGKISRLS-------SLEILNMSSNFLN 144 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~-l~g-~~~~~~~~l~-------~L~~L~Ls~N~l~ 144 (786)
.+++.|+|++|.+.+.+|. .+.+|++|++|+|++|. ++| .+|..+++++ +|+.|+|++|+++
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~---------~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPD---------FLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TTCCEEEEESCTTCCSCCG---------GGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred CCCCEEECcCCCCCccChH---------HHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 4688888888887777664 34455555555555555 555 4554333332 5555555555555
Q ss_pred CCCCc--cccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCC-CCEEEccCCcCCcCCCC
Q 003926 145 GAIPQ--ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLEN-LRVLALSNNHFYGEVPD 221 (786)
Q Consensus 145 ~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~ 221 (786)
.+|. .|+++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|.++ .+|..|.++++ |+.|+|++|.++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 4555 5555555555555555555 455 5555555555555555555 45555555555 555555555555 2332
Q ss_pred -CCCCC--cCCEEEcccCCCCCCCCccc--------cchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchh
Q 003926 222 -FSGLT--YLQVLDLENNALGPQFPKVG--------KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQA 290 (786)
Q Consensus 222 -~~~l~--~L~~L~L~~N~l~~~~p~~~--------~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 290 (786)
+..++ +|+.|+|++|.+.+.+|... .+|+.|++++|.++...+..+..+++|+.|+|++|+|+ .+|..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 715 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPEN 715 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChH
Confidence 33332 25555555555554443211 23444445555444222222234444444444444444 33332
Q ss_pred hCCC--------CCCcEEEeecCCCCcccCccCC--CCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCC
Q 003926 291 LLSL--------PSITYLNIADNKLTGKLFDDLS--CNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYAR 352 (786)
Q Consensus 291 ~~~l--------~~L~~L~l~~N~l~g~~~~~~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~ 352 (786)
+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+.++..+++++
T Consensus 716 ~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 716 SLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp SSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred HhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 2221 14444444444444 3343333 44444444444444444 444444444444444433
No 274
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=2.2e-28 Score=263.22 Aligned_cols=265 Identities=20% Similarity=0.220 Sum_probs=225.7
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
.++.|++++|.+++..+. .+.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+.
T Consensus 53 ~l~~L~L~~n~i~~~~~~---------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-- 120 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDG---------DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP-- 120 (330)
T ss_dssp TCCEEECCSSCCCCBCTT---------TTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--
T ss_pred CCeEEECCCCcCCEeChh---------hhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--
Confidence 467788887776654332 5678999999999999999999999999999999999999998 5666554
Q ss_pred CCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc--ccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEE
Q 003926 155 TSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN--GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLD 232 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ 232 (786)
++|++|++++|.+++..+..|.++++|+.|++++|.+. +..+..|.++++|+.|++++|.++.....+. ++|++|+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~ 198 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELH 198 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEE
Confidence 89999999999999888889999999999999999996 4788899999999999999999987544443 8999999
Q ss_pred cccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 233 LENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 233 L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
+++|.+++..|.. .++|+.|++++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++
T Consensus 199 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 199 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp CTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 9999998876654 468999999999999988889999999999999999999 789999999999999999999998
Q ss_pred ccCccCCC------CCCCCEEeCcCCcCCc--cCChhhhcCCCCcEEEcCCcc
Q 003926 310 KLFDDLSC------NPELGFVDLSSNLLTG--QLPNCLLAGSKNRVVLYARNC 354 (786)
Q Consensus 310 ~~~~~~~~------~~~L~~l~ls~N~l~g--~~p~~~~~~~~~~~~~~~~N~ 354 (786)
..+..+.. .+.|..|++++|.+.. ..|..+.....+..+++++|+
T Consensus 278 ~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 278 IGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 87776643 3778999999999863 445666667777888887773
No 275
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=278.76 Aligned_cols=252 Identities=21% Similarity=0.189 Sum_probs=234.8
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|+.|+|++|++.+..+..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 57899999999999999999999999999999999999999999999999999999999999777778999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCc---cccchhhhhccCCccCCc
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPK---VGKKLVTMILSKNKFRSA 262 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~---~~~~L~~L~ls~N~l~~~ 262 (786)
++|.+.+..|..|.++++|+.|+|++|.+++..+ .|.++++|+.|+|++|.+++..+. ..++|+.|++++|.+.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 9999999999999999999999999999998776 499999999999999999876654 357899999999999999
Q ss_pred ChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC
Q 003926 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 342 (786)
.+..|..+++|+.|+|++|.+.+.+|..+....+|+.|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 89899999999999999999999999888888899999999999997766788999999999999999998888888889
Q ss_pred CCCcEEEcCCcccCCC
Q 003926 343 SKNRVVLYARNCLAAG 358 (786)
Q Consensus 343 ~~~~~~~~~~N~l~~~ 358 (786)
.++..+.+++|.+.+.
T Consensus 272 ~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVV 287 (477)
T ss_dssp TTCCEEECCSSCCSEE
T ss_pred ccCCEEECCCCccceE
Confidence 9999999999998763
No 276
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=1.8e-29 Score=291.38 Aligned_cols=157 Identities=23% Similarity=0.192 Sum_probs=126.5
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
+++.|++++|.+++..|. .+.++++|++|+|++|.+.+..|+.|+++++|++|+|++|.+++..|..|+++
T Consensus 27 ~L~~L~Ls~n~l~~~~~~---------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 97 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHG---------DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL 97 (549)
T ss_dssp TCCEEECCSSCCCEECSS---------TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTC
T ss_pred CccEEECcCCccCccChh---------hhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccC
Confidence 688899988887655443 46688899999999999988888889999999999999999988877778999
Q ss_pred CCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCC-ccccCCCCCCEEEccCCcCCcCCCC-CCC-------
Q 003926 155 TSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVPD-FSG------- 224 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~------- 224 (786)
++|++|+|++|.+++ .+|..|+++++|++|++++|.+.+.+| ..|.++++|++|++++|.+++.+|. +..
T Consensus 98 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 98 SSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHL 177 (549)
T ss_dssp TTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEE
T ss_pred CCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceE
Confidence 999999999999886 467788899999999999988544554 5788899999999999988876653 433
Q ss_pred -----------------CCcCCEEEcccCCCCC
Q 003926 225 -----------------LTYLQVLDLENNALGP 240 (786)
Q Consensus 225 -----------------l~~L~~L~L~~N~l~~ 240 (786)
+++|++|++++|++++
T Consensus 178 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 178 TLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 5667777777777665
No 277
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=1.3e-28 Score=291.61 Aligned_cols=275 Identities=19% Similarity=0.175 Sum_probs=216.3
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+.+..+ ..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~---------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 95 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPA---------ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF 95 (680)
T ss_dssp TTCSEEECCSSCCCCCCG---------GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCcEEECCCCCCCCcCH---------HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhcc
Confidence 368888888887765433 24668889999999999998888888889999999999999988766667889
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC---CCCCCcCCE
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD---FSGLTYLQV 230 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~l~~L~~ 230 (786)
+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++..+. +..+++|+.
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 175 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKK 175 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESE
T ss_pred CCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccE
Confidence 99999999999999877778889999999999999999888888888899999999999988877664 335688899
Q ss_pred EEcccCCCCCCCCccc------------------------------cchhhhhccCCccCCcChhhhcCccc--cceeec
Q 003926 231 LDLENNALGPQFPKVG------------------------------KKLVTMILSKNKFRSAIPAEVSSYYQ--LQRLDL 278 (786)
Q Consensus 231 L~L~~N~l~~~~p~~~------------------------------~~L~~L~ls~N~l~~~~p~~~~~l~~--L~~L~L 278 (786)
|++++|.+++..|... ++|+.|++++|.+++..|..|.+++. |+.|+|
T Consensus 176 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~L 255 (680)
T 1ziw_A 176 LELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255 (680)
T ss_dssp EECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEEC
T ss_pred EECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEEC
Confidence 9999888877665421 34677778888888877877777755 888888
Q ss_pred cCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc-----cCCh----hhhcCCCCcEEE
Q 003926 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG-----QLPN----CLLAGSKNRVVL 349 (786)
Q Consensus 279 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g-----~~p~----~~~~~~~~~~~~ 349 (786)
++|++++..|..|..+++|++|++++|++++..|..+..+++|+.|++++|...+ .+|. .+..+.++..++
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 8888887777788888888888888888888777777777777777777665554 2332 445566677777
Q ss_pred cCCcccCC
Q 003926 350 YARNCLAA 357 (786)
Q Consensus 350 ~~~N~l~~ 357 (786)
+++|.+.+
T Consensus 336 l~~n~l~~ 343 (680)
T 1ziw_A 336 MEDNDIPG 343 (680)
T ss_dssp CCSCCBCC
T ss_pred CCCCccCC
Confidence 77776665
No 278
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=6.7e-29 Score=284.59 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=63.2
Q ss_pred ccchhhhhccCCccCCcChhhhcCccccceeeccCccccC--CCchhhCCCCCCcEEEeecCCCCcccCcc-CCCCCCCC
Q 003926 246 GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG--PFPQALLSLPSITYLNIADNKLTGKLFDD-LSCNPELG 322 (786)
Q Consensus 246 ~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~~~~-~~~~~~L~ 322 (786)
.++|++|++++|++++.+|..+..+++|+.|+|++|++++ .+|..+..+++|++|++++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3456666666666666666666666666666666666665 44555666666666666666666544432 45555555
Q ss_pred EEeCcCCcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 323 FVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 323 ~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
.|++++|++++.+|..+. ..+..+++++|.++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 555555555555554432 34555555555544
No 279
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=298.59 Aligned_cols=247 Identities=23% Similarity=0.269 Sum_probs=205.8
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|+.|+|++|.+.+..|..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|..+++|+.|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 67888888888888888888888888888888888888888888888888888888888888887888888888888888
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCC------------------CC-----------------------CCCC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV------------------PD-----------------------FSGL 225 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~------------------p~-----------------------~~~l 225 (786)
++|.+.+..+..|.++++|+.|+|++|.+++.. |. +.++
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l 425 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRV 425 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcC
Confidence 888888777777888888888888888876421 10 2257
Q ss_pred CcCCEEEcccCCCCCCCCc----cccchhhhhccCCccC-----CcChhhhcCccccceeeccCccccCCCchhhCCCCC
Q 003926 226 TYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFR-----SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS 296 (786)
Q Consensus 226 ~~L~~L~L~~N~l~~~~p~----~~~~L~~L~ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 296 (786)
++|+.|+|++|++++..+. ..++|+.|++++|.++ +..|..|.++++|+.|+|++|+|++..|..|..+++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhh
Confidence 7888888888888754433 3578999999999987 445567889999999999999999999999999999
Q ss_pred CcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCCC
Q 003926 297 ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (786)
Q Consensus 297 L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~~ 358 (786)
|+.|+|++|+|++..+..+. ++|+.|+|++|++++.+|..+. .+..+++++|.+.+.
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICE 562 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCS
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccc
Confidence 99999999999988777765 8899999999999999987653 678999999988763
No 280
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=2.4e-28 Score=285.45 Aligned_cols=284 Identities=20% Similarity=0.174 Sum_probs=230.0
Q ss_pred CCEEEEEeCCCCCCCCCCCCCc-----------CC----ccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEec
Q 003926 74 ESITQLHIVGNKRAPMLPLSFS-----------MD----SFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNM 138 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~-----------~~----~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~L 138 (786)
.+++.|++++|.+.+..|..|. .+ ..|..+.++++|++|+|++|.+.+..+..|+++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 3567777777766554443221 11 12557889999999999999999998889999999999999
Q ss_pred cCCCCCC-CCCccccCCCCCcEEEcccccCCCCCCcccC-----------------------------------------
Q 003926 139 SSNFLNG-AIPQELSILTSLQTLILDENMLAGRVPDWLG----------------------------------------- 176 (786)
Q Consensus 139 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----------------------------------------- 176 (786)
++|.+++ .+|..|+++++|++|+|++|++++..|..|+
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~ 215 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNF 215 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCc
Confidence 9999986 6799999999999999999998765543221
Q ss_pred --------------------------------------------------------------------------------
Q 003926 177 -------------------------------------------------------------------------------- 176 (786)
Q Consensus 177 -------------------------------------------------------------------------------- 176 (786)
T Consensus 216 ~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 295 (606)
T 3vq2_A 216 NSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGV 295 (606)
T ss_dssp SCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESC
T ss_pred cchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCc
Confidence
Q ss_pred ----------------------------------------------------CCCCCCEEEccCCcCccc--CCccccCC
Q 003926 177 ----------------------------------------------------SLPILAVLSLRNNMFNGT--LPDSFSYL 202 (786)
Q Consensus 177 ----------------------------------------------------~l~~L~~L~Ls~N~l~~~--~p~~~~~l 202 (786)
.+++|++|++++|.+++. +|..+..+
T Consensus 296 ~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~ 375 (606)
T 3vq2_A 296 SIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGT 375 (606)
T ss_dssp CCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCC
T ss_pred cchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccC
Confidence 123344444444444433 24455556
Q ss_pred CCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCC-c---cccchhhhhccCCccCCcChhhhcCccccceeec
Q 003926 203 ENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFP-K---VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278 (786)
Q Consensus 203 ~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p-~---~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 278 (786)
++|+.|++++|.+++..+.+..+++|+.|++++|.+.+..| . ..++|+.|++++|.+++.+|..+..+++|+.|+|
T Consensus 376 ~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 455 (606)
T 3vq2_A 376 NSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455 (606)
T ss_dssp SCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred CcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEEC
Confidence 66666666666666555568889999999999999988776 2 2478999999999999999999999999999999
Q ss_pred cCccccC-CCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 279 SSNRFVG-PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 279 s~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++|++.+ .+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.+|..+..+..++.+++++|.++.
T Consensus 456 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 456 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 9999998 478899999999999999999999999999999999999999999999999999999999999999999874
No 281
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.2e-28 Score=273.69 Aligned_cols=226 Identities=23% Similarity=0.199 Sum_probs=198.0
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|++.+..|..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 58999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCC--CCCCCCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCc
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSA 262 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~ 262 (786)
++|.++...+..|.++++|+.|+|++|+..+.++ .|.++++|++|+|++|++++. |.. ..+|+.|+|++|.|++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCccc
Confidence 9999998878889999999999999965555554 388999999999999999764 433 36788888888888888
Q ss_pred ChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
.|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|.+.-
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 88888888888888888888888888888888888888888888887777777888888888888887753
No 282
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=3.6e-28 Score=281.19 Aligned_cols=265 Identities=22% Similarity=0.233 Sum_probs=166.3
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCC
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSIL 154 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 154 (786)
+++.|++++|.+.+..+ ..+.++++|++|+|++|.+++..|+.|.++++|++|+|++|.++ .+|.. .+
T Consensus 53 ~L~~L~Ls~N~i~~~~~---------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l 120 (562)
T 3a79_B 53 RTKALSLSQNSISELRM---------PDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PM 120 (562)
T ss_dssp TCCEEECCSSCCCCCCG---------GGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CC
T ss_pred CcCEEECCCCCccccCh---------hhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--cc
Confidence 56677777776654433 35667888888888888888888888888888888888888887 45554 78
Q ss_pred CCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC--CEEEccCCcC--CcCCCC-CCCC---
Q 003926 155 TSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL--RVLALSNNHF--YGEVPD-FSGL--- 225 (786)
Q Consensus 155 ~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~-~~~l--- 225 (786)
++|++|+|++|++++ .+|..|+++++|++|+|++|.+++. .|..+++| +.|++++|.+ ++..|. +..+
T Consensus 121 ~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~ 197 (562)
T 3a79_B 121 ASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTT 197 (562)
T ss_dssp TTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEE
T ss_pred ccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcc
Confidence 888888888888876 3567888888888888888877642 23333333 5555555554 332221 1111
Q ss_pred ------------------------------------------------------------------------------Cc
Q 003926 226 ------------------------------------------------------------------------------TY 227 (786)
Q Consensus 226 ------------------------------------------------------------------------------~~ 227 (786)
++
T Consensus 198 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~ 277 (562)
T 3a79_B 198 VLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRP 277 (562)
T ss_dssp EEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSS
T ss_pred eEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhccc
Confidence 13
Q ss_pred CCEEEcccCCCCCCCC--------------------------------------------------------ccccchhh
Q 003926 228 LQVLDLENNALGPQFP--------------------------------------------------------KVGKKLVT 251 (786)
Q Consensus 228 L~~L~L~~N~l~~~~p--------------------------------------------------------~~~~~L~~ 251 (786)
|++|++++|.+++.+| ...++|++
T Consensus 278 L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~ 357 (562)
T 3a79_B 278 VEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTF 357 (562)
T ss_dssp EEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCE
T ss_pred ccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceE
Confidence 3444444444443322 12245666
Q ss_pred hhccCCccCCcChhhhcCccccceeeccCccccC--CCchhhCCCCCCcEEEeecCCCCcccCc-cCCCCCCCCEEeCcC
Q 003926 252 MILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG--PFPQALLSLPSITYLNIADNKLTGKLFD-DLSCNPELGFVDLSS 328 (786)
Q Consensus 252 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~~~-~~~~~~~L~~l~ls~ 328 (786)
|++++|++++.+|..+.++++|+.|+|++|++++ .+|..+.++++|+.|++++|++++.+|. .+..+++|+.|++++
T Consensus 358 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~ 437 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSS 437 (562)
T ss_dssp EECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCS
T ss_pred EECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCC
Confidence 7777777776666667777777777777777765 3345566777777777777777664443 355556666666666
Q ss_pred CcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 329 NLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 329 N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
|++++.+|..+. .+++.+++++|.++
T Consensus 438 n~l~~~~~~~l~--~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 438 NMLTGSVFRCLP--PKVKVLDLHNNRIM 463 (562)
T ss_dssp SCCCGGGGSSCC--TTCSEEECCSSCCC
T ss_pred CCCCcchhhhhc--CcCCEEECCCCcCc
Confidence 666655554432 34555555555554
No 283
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.9e-28 Score=271.27 Aligned_cols=225 Identities=25% Similarity=0.232 Sum_probs=189.2
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|+.|+|++|++.+..+..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 67899999999999999999999999999999999999988899999999999999999999777788999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCC--CCCCCCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCc
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSA 262 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~ 262 (786)
++|.+....+..|.++++|+.|+|++|+..+.++ .|.++++|++|+|++|.++. +|.. ..+|+.|+|++|++++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCcc
Confidence 9999998888899999999999999965555554 38999999999999999874 3332 35677777777777777
Q ss_pred ChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC
Q 003926 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 332 (786)
.|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 7777777777777777777777777777777777777777777777766666777777777777777765
No 284
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=1e-28 Score=283.15 Aligned_cols=267 Identities=18% Similarity=0.182 Sum_probs=167.5
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+.+..| ..+.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. .
T Consensus 21 ~~L~~L~Ls~n~i~~~~~---------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~ 88 (520)
T 2z7x_B 21 QKTTILNISQNYISELWT---------SDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--P 88 (520)
T ss_dssp TTCSEEECCSSCCCCCCH---------HHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--C
T ss_pred ccccEEECCCCcccccCh---------hhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--c
Confidence 456666666665544322 34567777777777777777777777777777777777777777 35544 6
Q ss_pred CCCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC--CEEEccCCcC--CcCCCC-CCC---
Q 003926 154 LTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL--RVLALSNNHF--YGEVPD-FSG--- 224 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~-~~~--- 224 (786)
+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++ ..|..+++| +.|++++|.+ ++..|. +..
T Consensus 89 l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~ 165 (520)
T 2z7x_B 89 TVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNT 165 (520)
T ss_dssp CCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCE
T ss_pred cCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccccccccccccccc
Confidence 7777777777777776 467777777777777777777765 346666666 7777777777 444332 222
Q ss_pred -----------------------CCcCCEEEcccCC-------CCCCCCc-----------------------------c
Q 003926 225 -----------------------LTYLQVLDLENNA-------LGPQFPK-----------------------------V 245 (786)
Q Consensus 225 -----------------------l~~L~~L~L~~N~-------l~~~~p~-----------------------------~ 245 (786)
+++|+.|++++|. +.+.+|. .
T Consensus 166 ~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~ 245 (520)
T 2z7x_B 166 ESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVW 245 (520)
T ss_dssp EEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHH
T ss_pred ceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhh
Confidence 3333333333332 0000000 0
Q ss_pred ccchhhhhccCCccCCcChhhh-----cCccccceeeccCccccCCCc-hh-------------------------hCCC
Q 003926 246 GKKLVTMILSKNKFRSAIPAEV-----SSYYQLQRLDLSSNRFVGPFP-QA-------------------------LLSL 294 (786)
Q Consensus 246 ~~~L~~L~ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~-------------------------~~~l 294 (786)
.++|+.|++++|+++|.+|..+ .++++|+.+++++|.+ .+| .. +..+
T Consensus 246 ~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l 323 (520)
T 2z7x_B 246 HTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKI 323 (520)
T ss_dssp TSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSC
T ss_pred hCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhC
Confidence 1145566666666666666655 5555555555555544 222 11 1566
Q ss_pred CCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc--cCChhhhcCCCCcEEEcCCcccCC
Q 003926 295 PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG--QLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 295 ~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g--~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+.+++.+++++|.+.+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 677777777777777777777777777777777777775 556666667777777777777664
No 285
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=2.5e-28 Score=282.49 Aligned_cols=150 Identities=22% Similarity=0.199 Sum_probs=131.1
Q ss_pred EEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCC
Q 003926 77 TQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTS 156 (786)
Q Consensus 77 ~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 156 (786)
+.+++++++++. +|. .+. ++|++|+|++|.+.+..|..|.++++|++|+|++|++++..|..|.++++
T Consensus 34 ~~l~ls~~~L~~-ip~---------~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 101 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPK---------DLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQD 101 (562)
T ss_dssp CEEECTTSCCCS-CCT---------TSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTT
T ss_pred cEEEcCCCCCcc-CCC---------CCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCC
Confidence 788999988775 443 222 78999999999999999999999999999999999999999999999999
Q ss_pred CcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcc-cCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcC--CEEEc
Q 003926 157 LQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYL--QVLDL 233 (786)
Q Consensus 157 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L--~~L~L 233 (786)
|++|+|++|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+++| +.|++
T Consensus 102 L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 102 LEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ--LDLLPVAHLHLSCILL 176 (562)
T ss_dssp CCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT--TTTGGGTTSCEEEEEE
T ss_pred CCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc--CchhhhhhceeeEEEe
Confidence 999999999998 57766 89999999999999997 457899999999999999999986 346666666 99999
Q ss_pred ccCCC--CCCCC
Q 003926 234 ENNAL--GPQFP 243 (786)
Q Consensus 234 ~~N~l--~~~~p 243 (786)
++|.+ ++..|
T Consensus 177 ~~n~l~~~~~~~ 188 (562)
T 3a79_B 177 DLVSYHIKGGET 188 (562)
T ss_dssp EESSCCCCSSSC
T ss_pred ecccccccccCc
Confidence 99998 55544
No 286
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=3.4e-31 Score=299.97 Aligned_cols=216 Identities=22% Similarity=0.197 Sum_probs=139.9
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++.+| +..+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34478888888888888888888888888888888888887665 8888888888888888875332 3788888
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
+|++|.+++..+. .+++|+.|+|++|.+++..| .|+.+++|+.|+|++|.+++..
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--------------------- 160 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN--------------------- 160 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE---------------------
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC---------------------
Confidence 8888888876554 35778888888888887766 4777788888888777776543
Q ss_pred hhhhc-CccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC
Q 003926 264 PAEVS-SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (786)
Q Consensus 264 p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 342 (786)
|..+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++|+|++..| .+..+++|+.|+|++|.+++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 33332 344555555555555443 11 2234555555555555554322 24444555555555555553 44444444
Q ss_pred CCCcEEEcCCccc
Q 003926 343 SKNRVVLYARNCL 355 (786)
Q Consensus 343 ~~~~~~~~~~N~l 355 (786)
+.+..+++++|.+
T Consensus 237 ~~L~~L~l~~N~l 249 (487)
T 3oja_A 237 QNLEHFDLRGNGF 249 (487)
T ss_dssp TTCCEEECTTCCB
T ss_pred CCCCEEEcCCCCC
Confidence 4455555555544
No 287
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.1e-28 Score=265.99 Aligned_cols=250 Identities=22% Similarity=0.245 Sum_probs=198.5
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|++++..+..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 47889999999998877778889999999999999998888888889999999999999988655566888999999999
Q ss_pred cCCcCcccCC-ccccCCCCCCEEEccCCc-CCcCCC-CCCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccC
Q 003926 187 RNNMFNGTLP-DSFSYLENLRVLALSNNH-FYGEVP-DFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFR 260 (786)
Q Consensus 187 s~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~ 260 (786)
++|.+++..+ ..|.++++|+.|++++|+ +++..+ .|.++++|++|++++|.+++..|.. .++|++|++++|.++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9998885433 478889999999999884 555544 4888889999999999888776654 367888899999886
Q ss_pred CcChhhhcCccccceeeccCccccCCCchhhC---CCCCCcEEEeecCCCCc----ccCccCCCCCCCCEEeCcCCcCCc
Q 003926 261 SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALL---SLPSITYLNIADNKLTG----KLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 261 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~g----~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
...+..+..+++|+.|+|++|++++..+..+. ..+.++.+++++|.+++ .+|..+..+++|+.|++++|+++
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~- 290 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK- 290 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-
Confidence 54444456688899999999998876555443 45678888888888876 36677788888999999999888
Q ss_pred cCChhh-hcCCCCcEEEcCCcccCC
Q 003926 334 QLPNCL-LAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 334 ~~p~~~-~~~~~~~~~~~~~N~l~~ 357 (786)
.+|..+ ..+.+++.+++++|.+.+
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccC
Confidence 566654 677888888888888765
No 288
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=6.5e-28 Score=279.56 Aligned_cols=284 Identities=22% Similarity=0.196 Sum_probs=202.9
Q ss_pred CEEEEEeCCCCCCCCCCCCCc-----------CC---cc-ccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEecc
Q 003926 75 SITQLHIVGNKRAPMLPLSFS-----------MD---SF-VTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMS 139 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~-----------~~---~~-~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls 139 (786)
+++.|++++|.+++..+..|. .. .+ +..+.++++|++|+|++|.+.+..|..|+++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 577788887776644332221 11 12 2346778888888888888877777778888888888888
Q ss_pred CCCCCCCCCccccCCCCCcEEEcccccCCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCC---------------
Q 003926 140 SNFLNGAIPQELSILTSLQTLILDENMLAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE--------------- 203 (786)
Q Consensus 140 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--------------- 203 (786)
+|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..|+.++
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 888876666568888888888888888876 4678888888888888888877655443333332
Q ss_pred --------------------------------------------------------------------------------
Q 003926 204 -------------------------------------------------------------------------------- 203 (786)
Q Consensus 204 -------------------------------------------------------------------------------- 203 (786)
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence
Q ss_pred --------------CCCEEEccCCcCCcCCCCC------------------------------------------CCCCc
Q 003926 204 --------------NLRVLALSNNHFYGEVPDF------------------------------------------SGLTY 227 (786)
Q Consensus 204 --------------~L~~L~Ls~N~l~~~~p~~------------------------------------------~~l~~ 227 (786)
+|+.|++++|.+++.++.+ ..+++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 348 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCC
Confidence 3333333333322111101 22344
Q ss_pred CCEEEcccCCCCCCC--C------------------------c--cccchhhhhccCCccCCcCh-hhhcCccccceeec
Q 003926 228 LQVLDLENNALGPQF--P------------------------K--VGKKLVTMILSKNKFRSAIP-AEVSSYYQLQRLDL 278 (786)
Q Consensus 228 L~~L~L~~N~l~~~~--p------------------------~--~~~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L 278 (786)
|+.|++++|.+++.. | . ..++|+.|++++|.+++..| ..+.++++|+.|+|
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 428 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEEC
T ss_pred CCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeC
Confidence 445555555443221 0 0 12456777888888877766 56889999999999
Q ss_pred cCccccCCCchhhCCCCCCcEEEeecCCCC-cccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 279 SSNRFVGPFPQALLSLPSITYLNIADNKLT-GKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 279 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|++++..|..+..+++++.+++++|.+++
T Consensus 429 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 508 (570)
T 2z63_A 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508 (570)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCC
Confidence 999999999999999999999999999998 6788999999999999999999999889999889999999999999887
Q ss_pred C
Q 003926 358 G 358 (786)
Q Consensus 358 ~ 358 (786)
.
T Consensus 509 ~ 509 (570)
T 2z63_A 509 V 509 (570)
T ss_dssp C
T ss_pred C
Confidence 4
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=4.1e-28 Score=282.46 Aligned_cols=246 Identities=18% Similarity=0.121 Sum_probs=213.7
Q ss_pred cccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCC
Q 003926 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (786)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 180 (786)
..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++
T Consensus 93 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 172 (597)
T 3oja_B 93 YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 172 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCc
Confidence 47889999999999999999999999999999999999999999877777899999999999999999999999999999
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCc-------------------CCCCCCCCCcCCEEEcccCCCCCC
Q 003926 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG-------------------EVPDFSGLTYLQVLDLENNALGPQ 241 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-------------------~~p~~~~l~~L~~L~L~~N~l~~~ 241 (786)
|++|+|++|.+++.. ++.+++|+.|++++|.+++ ..+. ..++|+.|+|++|.+++.
T Consensus 173 L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~--~~~~L~~L~L~~n~l~~~ 247 (597)
T 3oja_B 173 LQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP--VNVELTILKLQHNNLTDT 247 (597)
T ss_dssp CCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS--CCSCCCEEECCSSCCCCC
T ss_pred CcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc--cCCCCCEEECCCCCCCCC
Confidence 999999999998753 4556666666666666654 2211 135899999999999874
Q ss_pred CCc--cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCC
Q 003926 242 FPK--VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP 319 (786)
Q Consensus 242 ~p~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~ 319 (786)
+. ..++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..++
T Consensus 248 -~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~ 324 (597)
T 3oja_B 248 -AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFD 324 (597)
T ss_dssp -GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHT
T ss_pred -hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCC
Confidence 32 24789999999999999999999999999999999999997 6888889999999999999999 5677788899
Q ss_pred CCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 320 ELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 320 ~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+|+.|+|++|.+++. | +..+..+..+++++|.+.+
T Consensus 325 ~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 325 RLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp TCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 999999999999865 3 4456789999999998875
No 290
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.7e-28 Score=261.24 Aligned_cols=227 Identities=26% Similarity=0.265 Sum_probs=173.3
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCC--CCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG--AIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
++|++|+|++|++....+..|.++++|+.|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 578999999999987766678999999999999999983 34677888999999999999987 577789999999999
Q ss_pred EccCCcCcccCC-ccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCC-CCCcc---ccchhhhhccCCc
Q 003926 185 SLRNNMFNGTLP-DSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGP-QFPKV---GKKLVTMILSKNK 258 (786)
Q Consensus 185 ~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~-~~p~~---~~~L~~L~ls~N~ 258 (786)
++++|.+++..+ ..|..+++|++|++++|.+++..+. +..+++|++|+|++|.+++ .+|.. .++|+.|++++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999987655 5788999999999999999887775 7888999999999888765 23332 3456666666666
Q ss_pred cCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCC-CCCEEeCcCCcCCcc
Q 003926 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP-ELGFVDLSSNLLTGQ 334 (786)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~-~L~~l~ls~N~l~g~ 334 (786)
+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+..++ +|+.|+|++|.+++.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 6666666666666666666666666665555666666666666666666666666666553 666666666666543
No 291
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=1.8e-27 Score=281.98 Aligned_cols=275 Identities=22% Similarity=0.177 Sum_probs=238.0
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+.+..|. .+.++++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|++
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~---------~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 119 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPE---------LCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVK 119 (680)
T ss_dssp TTCSEEECCSSCCCCCCTT---------HHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTT
T ss_pred CcCcEEECCCCccCccCHH---------HHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccc
Confidence 5789999999887765553 5678999999999999999877778999999999999999999888889999
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCcccc--CCCCCCEEEccCCcCCcCCCC-CCCC-----
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFS--YLENLRVLALSNNHFYGEVPD-FSGL----- 225 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~-~~~l----- 225 (786)
+++|++|+|++|.+++..|..++++++|++|++++|.+++..+..+. .+++|+.|++++|.+++..|. |..+
T Consensus 120 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 199 (680)
T 1ziw_A 120 QKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFG 199 (680)
T ss_dssp CTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECE
T ss_pred cCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhh
Confidence 99999999999999998899999999999999999999987777654 568999999999999887764 3322
Q ss_pred ----------------------CcCCEEEcccCCCCCCCCccc-----cchhhhhccCCccCCcChhhhcCccccceeec
Q 003926 226 ----------------------TYLQVLDLENNALGPQFPKVG-----KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDL 278 (786)
Q Consensus 226 ----------------------~~L~~L~L~~N~l~~~~p~~~-----~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 278 (786)
++|+.|++++|.+++..|... ++|+.|++++|++++..|..|..+++|+.|+|
T Consensus 200 L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (680)
T 1ziw_A 200 LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFL 279 (680)
T ss_dssp EECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred hhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeC
Confidence 568888999999887777653 34999999999999999999999999999999
Q ss_pred cCccccCCCchhhCCCCCCcEEEeecCCCCcc-----cCc----cCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEE
Q 003926 279 SSNRFVGPFPQALLSLPSITYLNIADNKLTGK-----LFD----DLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVL 349 (786)
Q Consensus 279 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~-----~~~----~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~ 349 (786)
++|++.+..|..|..+++|+.|++++|...+. +|. .+..+++|+.|++++|.+++..|..+..+.+++.++
T Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 359 (680)
T 1ziw_A 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLS 359 (680)
T ss_dssp CSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEE
T ss_pred CCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEE
Confidence 99999999999999999999999998876652 333 677889999999999999998888888899999999
Q ss_pred cCCcccCC
Q 003926 350 YARNCLAA 357 (786)
Q Consensus 350 ~~~N~l~~ 357 (786)
+++|.+.+
T Consensus 360 Ls~n~~~~ 367 (680)
T 1ziw_A 360 LSNSFTSL 367 (680)
T ss_dssp CTTCBSCC
T ss_pred CCCCchhh
Confidence 99987654
No 292
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=2.2e-27 Score=261.61 Aligned_cols=248 Identities=19% Similarity=0.125 Sum_probs=211.3
Q ss_pred cccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCC
Q 003926 101 TTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (786)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 180 (786)
..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.++...+..|.++++|++|+|++|.+++..|..|..+++
T Consensus 87 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 166 (390)
T 3o6n_A 87 YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 166 (390)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTT
T ss_pred hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCC
Confidence 46889999999999999999999999999999999999999999766666799999999999999999888899999999
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCC-C-C---------------CCCCCcCCEEEcccCCCCCCCC
Q 003926 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV-P-D---------------FSGLTYLQVLDLENNALGPQFP 243 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p-~---------------~~~l~~L~~L~L~~N~l~~~~p 243 (786)
|++|++++|.+++.. ++.+++|+.|++++|.+++.. | . ....++|+.|++++|.+++. +
T Consensus 167 L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~-~ 242 (390)
T 3o6n_A 167 LQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT-A 242 (390)
T ss_dssp CCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC-G
T ss_pred CCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc-H
Confidence 999999999998652 455666666666666655411 1 1 12246899999999999875 3
Q ss_pred c--cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCC
Q 003926 244 K--VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPEL 321 (786)
Q Consensus 244 ~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L 321 (786)
. ..++|+.|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++++ +|..+..+++|
T Consensus 243 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L 320 (390)
T 3o6n_A 243 WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRL 320 (390)
T ss_dssp GGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTC
T ss_pred HHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcC
Confidence 3 24789999999999999999999999999999999999986 67778899999999999999994 56667888999
Q ss_pred CEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 322 GFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 322 ~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+.|++++|+++.. | +....+++.+++++|.+.+
T Consensus 321 ~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 321 ENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp SEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 9999999999864 4 5567789999999998865
No 293
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.8e-30 Score=273.89 Aligned_cols=263 Identities=23% Similarity=0.250 Sum_probs=169.2
Q ss_pred CCCCCCCCCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCC-ccCCCccC
Q 003926 49 LSSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL-WGPLSGKI 127 (786)
Q Consensus 49 l~~W~~~~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l-~g~~~~~~ 127 (786)
..+|.....|+.+. ...+.|...+++.+++.++.+ .+|. .+... |+.|+|++|.+ .+.+|..+
T Consensus 21 ~~~~~~~~~c~~~~---~~~~~~~~~~L~~l~l~~n~l--~~p~---------~~~~~--L~~L~L~~n~l~~~~~~~~~ 84 (312)
T 1wwl_A 21 KPDWSSAFNCLGAA---DVELYGGGRSLEYLLKRVDTE--ADLG---------QFTDI--IKSLSLKRLTVRAARIPSRI 84 (312)
T ss_dssp SCCGGGGGGSSSCS---EEEEEEEEEECTTHHHHCCTT--CCCH---------HHHHH--HHHCCCCEEEEEEEECBHHH
T ss_pred ccchHHHhhhhccc---cEEEEccCCCceeEeeccccc--ccHH---------HHHHH--HhhcccccccccCCCcCHHH
Confidence 34565444444433 234556555666677777665 3332 22222 67778888887 45666666
Q ss_pred C-------CCCCCCEEeccCCCCCCCCCccc--cCCCCCcEEEcccccCCCCCCcccCCC-----CCCCEEEccCCcCcc
Q 003926 128 S-------RLSSLEILNMSSNFLNGAIPQEL--SILTSLQTLILDENMLAGRVPDWLGSL-----PILAVLSLRNNMFNG 193 (786)
Q Consensus 128 ~-------~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~ 193 (786)
. ++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++.+
T Consensus 85 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~ 163 (312)
T 1wwl_A 85 LFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLN 163 (312)
T ss_dssp HHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCC
T ss_pred HHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCcc
Confidence 5 68888888888888888888776 7888888888888888876 7777766 788888888888887
Q ss_pred cCCccccCCCCCCEEEccCCcCCcCC---CC--CCCCCcCCEEEcccCCCCCC--CCc----cccchhhhhccCCccCCc
Q 003926 194 TLPDSFSYLENLRVLALSNNHFYGEV---PD--FSGLTYLQVLDLENNALGPQ--FPK----VGKKLVTMILSKNKFRSA 262 (786)
Q Consensus 194 ~~p~~~~~l~~L~~L~Ls~N~l~~~~---p~--~~~l~~L~~L~L~~N~l~~~--~p~----~~~~L~~L~ls~N~l~~~ 262 (786)
..|..|+++++|++|+|++|++.+.+ +. +..+++|++|+|++|.+++. ++. ..++|+.|++++|++++.
T Consensus 164 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 243 (312)
T 1wwl_A 164 FSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDA 243 (312)
T ss_dssp CCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSS
T ss_pred chHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcc
Confidence 77778888888888888888877642 23 37778888888888877631 111 124555666666666555
Q ss_pred Ch-hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 263 IP-AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 263 ~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
+| ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 244 ~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 244 AGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 43 23444555666666666665 4555444 5566666666666554 33 5555566666666665553
No 294
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=5.6e-27 Score=246.74 Aligned_cols=234 Identities=23% Similarity=0.216 Sum_probs=178.9
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCC
Q 003926 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAI 147 (786)
Q Consensus 68 ~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (786)
++.|.....+.++.+++.+.. +|. . -.++|++|+|++|.+++..+..|.++++|++|+|++|.+++..
T Consensus 5 ~C~C~~~~~~~~~c~~~~l~~-ip~---------~--~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 72 (285)
T 1ozn_A 5 ACVCYNEPKVTTSCPQQGLQA-VPV---------G--IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARID 72 (285)
T ss_dssp TCEEECSSSCEEECCSSCCSS-CCT---------T--CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CceECCCCCeEEEcCcCCccc-CCc---------C--CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeC
Confidence 366755444566766655442 232 1 2368999999999999988889999999999999999999988
Q ss_pred CccccCCCCCcEEEccccc-CCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCC
Q 003926 148 PQELSILTSLQTLILDENM-LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGL 225 (786)
Q Consensus 148 p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l 225 (786)
|..|.++++|++|+|++|. +....|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+. |..+
T Consensus 73 ~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 152 (285)
T 1ozn_A 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152 (285)
T ss_dssp TTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred HhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccC
Confidence 9999999999999999997 7766688999999999999999999988888899999999999999999877765 7889
Q ss_pred CcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecC
Q 003926 226 TYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADN 305 (786)
Q Consensus 226 ~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 305 (786)
++|++|+|++|.+++. .+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|
T Consensus 153 ~~L~~L~l~~n~l~~~---------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 153 GNLTHLFLHGNRISSV---------------------PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp TTCCEEECCSSCCCEE---------------------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCccEEECCCCccccc---------------------CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 9999999888877532 2334555566666666666666666666666666666666666
Q ss_pred CCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 306 KLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 306 ~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
++++..+..+..+++|+.|++++|.++..
T Consensus 212 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 212 NLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp CCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred cCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 66665555566666666666666666543
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=259.15 Aligned_cols=274 Identities=18% Similarity=0.168 Sum_probs=223.9
Q ss_pred CCCCCCCCCCCCCCCCccEEeCC-----------CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCC
Q 003926 51 SWNITTEFCNTEPTSSLTVVCYE-----------ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGL 119 (786)
Q Consensus 51 ~W~~~~~~C~w~~~~~~~v~c~~-----------~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l 119 (786)
.|.....+|.|.+ .+.|.. .+++.|++++|.+....+ ..+.++++|++|+|++|.+
T Consensus 22 ~~~~~~~~C~~~~----~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~---------~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 22 SSNQASLSCDRNG----ICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISN---------SDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp -----CCEECTTS----EEECCSTTCSSCCTTCCTTCCEEECTTSCCCEECT---------TTTTTCTTCCEEECTTSCC
T ss_pred CCCccCCCCCCCe----EeeCCCCCcccccccccccCcEEECCCCcCcccCH---------HHhccCCCCCEEECCCCcc
Confidence 4555567888875 134432 257888888887664332 2567899999999999999
Q ss_pred ccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCC-cccCCCCCCCEEEccCC-cCcccCCc
Q 003926 120 WGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVP-DWLGSLPILAVLSLRNN-MFNGTLPD 197 (786)
Q Consensus 120 ~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~ 197 (786)
++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+ ..|..+++|++|++++| .+.+..|.
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 168 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK 168 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT
T ss_pred CccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHH
Confidence 99999999999999999999999997766669999999999999999995444 48999999999999999 57777788
Q ss_pred cccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhc---Cc
Q 003926 198 SFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVS---SY 270 (786)
Q Consensus 198 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~---~l 270 (786)
.|.++++|+.|++++|.+++..|. +..+++|++|++++|.++...+.. .++|+.|++++|.+++..+..+. ..
T Consensus 169 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~ 248 (353)
T 2z80_A 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETN 248 (353)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CC
T ss_pred HccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccccccc
Confidence 899999999999999999988664 899999999999999985433222 47899999999999987665543 35
Q ss_pred cccceeeccCccccC----CCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCCh
Q 003926 271 YQLQRLDLSSNRFVG----PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPN 337 (786)
Q Consensus 271 ~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~ 337 (786)
..++.++|++|.+++ .+|..+..+++|+.|++++|+++...+..+..+++|+.|++++|++++..|.
T Consensus 249 ~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 249 SLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp CCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred chhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 678889999988876 4788999999999999999999954444468999999999999999988773
No 296
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.3e-27 Score=251.14 Aligned_cols=243 Identities=24% Similarity=0.185 Sum_probs=214.2
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCC--CCCcccCCCCCCCEEEccC
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAG--RVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~ 188 (786)
.++.++++++.. |..+ .++|+.|+|++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~~i-p~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCSSC-CSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcccC-CCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 456666666543 4333 2689999999999996666668999999999999999983 3467788899999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCC--CCCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCC-c
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRS-A 262 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~-~ 262 (786)
|.+.. +|..|..+++|++|++++|.+++..+ .+..+++|++|++++|.+.+..+.. .++|+.|++++|.+++ .
T Consensus 88 n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Ccccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 99984 77789999999999999999998765 5899999999999999998777764 4789999999999987 6
Q ss_pred ChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC
Q 003926 263 IPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 342 (786)
+|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+...
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 78899999999999999999999889999999999999999999999888889999999999999999999999988887
Q ss_pred C-CCcEEEcCCcccCC
Q 003926 343 S-KNRVVLYARNCLAA 357 (786)
Q Consensus 343 ~-~~~~~~~~~N~l~~ 357 (786)
. .+..+++++|.+.+
T Consensus 247 ~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 247 PSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTCCEEC
T ss_pred hccCCEEEccCCCeec
Confidence 4 89999999999876
No 297
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=2.3e-26 Score=258.09 Aligned_cols=252 Identities=23% Similarity=0.186 Sum_probs=179.4
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|+++++.+.+. | .+..+++|++|+|++|++++. | ++.+++|++|+|++|.+++. | +++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~----------~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T----------GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TTCCEEECCSSCCCCC-T----------TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred CCCCEEEccCCCcccC-h----------hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 4678888888776642 2 356778888888888888775 3 77888888888888888764 3 778
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEc
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (786)
+++|++|+|++|++++ +| ++.+++|++|++++|.+++. + ++++++|++|++++|+..+.+ .+..+++|+.|++
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~l 177 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDC 177 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEEC
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCEEEC
Confidence 8888888888888876 34 77888888888888888763 3 777788888888888666555 4677788888888
Q ss_pred ccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCc
Q 003926 234 ENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFD 313 (786)
Q Consensus 234 ~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~ 313 (786)
++|++++......++|+.|++++|++++. .++.+++|+.|+|++|++++ +| +..+++|+.|++++|++++..+.
T Consensus 178 s~n~l~~l~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 178 SFNKITELDVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp CSSCCCCCCCTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred CCCccceeccccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 88887775433456777788888887764 36777778888888888876 45 77777888888888888776555
Q ss_pred cCCCCC-------CCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 314 DLSCNP-------ELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 314 ~~~~~~-------~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+..+. +|+.|++++|.+.|.+| +..+.+++.+++++|...+
T Consensus 252 ~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 252 TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp TCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred HCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccc
Confidence 444443 45566666666666665 2344566666666665443
No 298
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=4.2e-27 Score=271.48 Aligned_cols=139 Identities=27% Similarity=0.362 Sum_probs=128.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 68999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred cCCcCcc-cCCccccCCCCCCEEEccCCcCCcCCC--CCCCCCcCCEEEcccCCCCCCCCcc
Q 003926 187 RNNMFNG-TLPDSFSYLENLRVLALSNNHFYGEVP--DFSGLTYLQVLDLENNALGPQFPKV 245 (786)
Q Consensus 187 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~p~~ 245 (786)
++|.+++ ..|..|+++++|++|++++|.+.+.+| .|.++++|++|++++|.+++..|..
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 9999987 467889999999999999999666555 4999999999999999998866643
No 299
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=1.8e-26 Score=259.38 Aligned_cols=242 Identities=20% Similarity=0.168 Sum_probs=213.7
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCc
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 190 (786)
.++.++++++. +|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|.
T Consensus 58 ~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 34445555543 344443 689999999999999999999999999999999999999989999999999999999999
Q ss_pred CcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCc----cccchhhhhccCCccCCcChh
Q 003926 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 191 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~----~~~~L~~L~ls~N~l~~~~p~ 265 (786)
+++..+..|.++++|++|+|++|.++...+ .|..+++|+.|+|++|+..+.++. ..++|+.|++++|++++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 998888889999999999999999997666 489999999999999655444443 347899999999999864 4
Q ss_pred hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCC
Q 003926 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKN 345 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~ 345 (786)
.+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+.++
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999998777778888899
Q ss_pred cEEEcCCcccCC
Q 003926 346 RVVLYARNCLAA 357 (786)
Q Consensus 346 ~~~~~~~N~l~~ 357 (786)
..+++++|.+.+
T Consensus 293 ~~L~L~~Np~~C 304 (452)
T 3zyi_A 293 VELHLHHNPWNC 304 (452)
T ss_dssp CEEECCSSCEEC
T ss_pred CEEEccCCCcCC
Confidence 999999998765
No 300
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=6.9e-29 Score=264.91 Aligned_cols=245 Identities=21% Similarity=0.181 Sum_probs=213.1
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCC-CCCCCcccc-------CCCCCcEEEcccccCCCCCCcc
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFL-NGAIPQELS-------ILTSLQTLILDENMLAGRVPDW 174 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~ 174 (786)
++++++|+.|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45678899999999999 778766654 99999999999 567787776 8999999999999999999987
Q ss_pred c--CCCCCCCEEEccCCcCcccCCccccCC-----CCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCC--C-
Q 003926 175 L--GSLPILAVLSLRNNMFNGTLPDSFSYL-----ENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQF--P- 243 (786)
Q Consensus 175 ~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~--p- 243 (786)
+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..| .|..+++|++|+|++|++.+.+ |
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 9999999999999999987 8888877 999999999999998885 5999999999999999987642 1
Q ss_pred ----ccccchhhhhccCCccCC--cCh-hhhcCccccceeeccCccccCCCc-hhhCCCCCCcEEEeecCCCCcccCccC
Q 003926 244 ----KVGKKLVTMILSKNKFRS--AIP-AEVSSYYQLQRLDLSSNRFVGPFP-QALLSLPSITYLNIADNKLTGKLFDDL 315 (786)
Q Consensus 244 ----~~~~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~~~~~ 315 (786)
...++|++|++++|+|++ .++ ..+.++++|+.|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 345789999999999984 233 345688999999999999999876 56677899999999999999 777777
Q ss_pred CCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 316 SCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 316 ~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
. ++|+.|+|++|++++. |. +....+++.+++++|.+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6 8999999999999976 66 7788889999999999875
No 301
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=5.5e-26 Score=254.96 Aligned_cols=233 Identities=21% Similarity=0.119 Sum_probs=128.8
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+++. | ++++++|++|+|++|.+++. + ++++++|++|+|++|.+++. | ++.
T Consensus 64 ~~L~~L~Ls~n~l~~~-~-----------~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~ 125 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D-----------LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQ 125 (457)
T ss_dssp TTCSEEECCSSCCSCC-C-----------CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTT
T ss_pred CCCCEEEccCCcCCeE-c-----------cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCC
Confidence 5688888888876652 1 34566666666666666664 2 66666666666666666653 3 666
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEc
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (786)
+++|++|++++|++++. + ++.+++|++|++++|...+.+ .++.+++|+.|++++|++++. | +..+++|+.|++
T Consensus 126 l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l 198 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNC 198 (457)
T ss_dssp CTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEEC
T ss_pred CCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c-cccCCCCCEEEC
Confidence 66666666666666653 2 556666666666666444444 255566666666666666552 2 555555666666
Q ss_pred ccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCC-------CCcEEEeecCC
Q 003926 234 ENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLP-------SITYLNIADNK 306 (786)
Q Consensus 234 ~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------~L~~L~l~~N~ 306 (786)
++|.+++......++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+.++. +|+.|++++|.
T Consensus 199 ~~N~l~~~~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~ 275 (457)
T 3bz5_A 199 DTNNITKLDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNT 275 (457)
T ss_dssp CSSCCSCCCCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCT
T ss_pred cCCcCCeeccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCc
Confidence 6655555422233455555555555555 33 55555555555555555554433333332 33344444444
Q ss_pred CCcccCccCCCCCCCCEEeCcCCcCCccCC
Q 003926 307 LTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (786)
Q Consensus 307 l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p 336 (786)
+.|.+| ++.+++|+.|++++|.+.|.+|
T Consensus 276 ~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 276 QLIYFQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp TCCEEE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred cCCccc--ccccccCCEEECCCCcccceec
Confidence 444333 2333444444444444444433
No 302
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=4.4e-26 Score=255.37 Aligned_cols=241 Identities=21% Similarity=0.189 Sum_probs=212.5
Q ss_pred EEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcC
Q 003926 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191 (786)
Q Consensus 112 L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 191 (786)
++..++++.. +|..+. ++++.|+|++|++++..+..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|++
T Consensus 48 v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 3444444433 344443 6899999999999999999999999999999999999988889999999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCc----cccchhhhhccCCccCCcChhh
Q 003926 192 NGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFRSAIPAE 266 (786)
Q Consensus 192 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~----~~~~L~~L~ls~N~l~~~~p~~ 266 (786)
++..+..|.++++|+.|+|++|.++...+ .|..+++|+.|+|++|+..+.++. ..++|+.|++++|+++. +| .
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~ 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-N 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-C
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-c
Confidence 98777789999999999999999997766 489999999999999665444443 25789999999999985 55 4
Q ss_pred hcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCc
Q 003926 267 VSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNR 346 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~ 346 (786)
+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+.++.
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 282 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCC
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999987777788889999
Q ss_pred EEEcCCcccCC
Q 003926 347 VVLYARNCLAA 357 (786)
Q Consensus 347 ~~~~~~N~l~~ 357 (786)
.+++++|.+.+
T Consensus 283 ~L~L~~Np~~C 293 (440)
T 3zyj_A 283 RIHLHHNPWNC 293 (440)
T ss_dssp EEECCSSCEEC
T ss_pred EEEcCCCCccC
Confidence 99999998865
No 303
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=1e-25 Score=244.08 Aligned_cols=259 Identities=20% Similarity=0.261 Sum_probs=208.5
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|+++++.+... +. +.++++|++|+|++|.+.+. +.+.++++|++|+|++|.+++..+ +..
T Consensus 66 ~~L~~L~l~~n~i~~~----------~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~ 130 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDI----------SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LAN 130 (347)
T ss_dssp TTCCEEECCSSCCCCC----------GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTT
T ss_pred CCccEEEccCCccccc----------hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hcc
Confidence 4677777777655432 12 66888888999988888764 358888889999999888886433 888
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEc
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (786)
+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 131 l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l 206 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTA 206 (347)
T ss_dssp CTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeec
Confidence 8889999998887665544 48888889999999888875443 7888899999999998876443 788888999999
Q ss_pred ccCCCCCCCCc-cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccC
Q 003926 234 ENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 234 ~~N~l~~~~p~-~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~ 312 (786)
++|.+.+..+. ..++|+.|++++|.+++..+ +..+++|+.|+|++|.+++. +.+..+++|+.|++++|++++.
T Consensus 207 ~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-- 280 (347)
T 4fmz_A 207 YVNQITDITPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-- 280 (347)
T ss_dssp CSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--
T ss_pred ccCCCCCCchhhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--
Confidence 99988766542 34788999999999987544 88899999999999999864 4688899999999999999875
Q ss_pred ccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 313 ~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+.+..+++|+.|++++|.+++..|..+..+++++.+++++|.+++
T Consensus 281 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 457788999999999999998888888888999999999998876
No 304
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=4.5e-26 Score=267.27 Aligned_cols=252 Identities=23% Similarity=0.179 Sum_probs=209.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
+++++|||++|+|++..+..|.++++|++|||++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37899999999999999999999999999999999999988999999999999999999999888889999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcC-CCC-CCCCCcCCEEEcccCCCCCCCCccc------------------
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE-VPD-FSGLTYLQVLDLENNALGPQFPKVG------------------ 246 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~-~~~l~~L~~L~L~~N~l~~~~p~~~------------------ 246 (786)
++|++++..+..|+++++|++|+|++|.+++. +|. +..+++|++|+|++|++++..+...
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 99999988778899999999999999999864 454 7889999999999998753221100
Q ss_pred --------------------------------------------------------------------------------
Q 003926 247 -------------------------------------------------------------------------------- 246 (786)
Q Consensus 247 -------------------------------------------------------------------------------- 246 (786)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred -------------------------------------------------------------------------------c
Q 003926 247 -------------------------------------------------------------------------------K 247 (786)
Q Consensus 247 -------------------------------------------------------------------------------~ 247 (786)
+
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 0
Q ss_pred chhhhhccCCccCC--c------------------------------------------------ChhhhcCccccceee
Q 003926 248 KLVTMILSKNKFRS--A------------------------------------------------IPAEVSSYYQLQRLD 277 (786)
Q Consensus 248 ~L~~L~ls~N~l~~--~------------------------------------------------~p~~~~~l~~L~~L~ 277 (786)
+|+.+++++|.+.. . .+..+.++.+++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 01111222222210 0 001233455667777
Q ss_pred ccCccccCCCchhhCCCCCCcEEEeecCCC-CcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 278 LSSNRFVGPFPQALLSLPSITYLNIADNKL-TGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 278 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l-~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
++.|.+.+..|..+..+++|+.|++++|++ .+.+|..+..+++|+.|+|++|++++..|..+..+.+++.+++++|.++
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 888888888899999999999999999985 4567888999999999999999999999999999999999999999998
Q ss_pred CC
Q 003926 357 AG 358 (786)
Q Consensus 357 ~~ 358 (786)
+.
T Consensus 532 ~l 533 (635)
T 4g8a_A 532 SL 533 (635)
T ss_dssp BC
T ss_pred CC
Confidence 74
No 305
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=6.8e-26 Score=245.48 Aligned_cols=258 Identities=23% Similarity=0.271 Sum_probs=223.7
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++++|.+... +.+.++++|++|+|++|.+.+..+ +..+++|+.|++++|.....++. +..
T Consensus 88 ~~L~~L~L~~n~i~~~-----------~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~ 153 (347)
T 4fmz_A 88 VKLTNLYIGTNKITDI-----------SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSN 153 (347)
T ss_dssp TTCCEEECCSSCCCCC-----------GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTT
T ss_pred CcCCEEEccCCcccCc-----------hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhh
Confidence 5788999998876531 247899999999999999987644 89999999999999977665554 999
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEc
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDL 233 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L 233 (786)
+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 154 l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l 228 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKI 228 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEEC
T ss_pred CCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-hhcCCcCCEEEc
Confidence 9999999999999986544 8999999999999999986433 8899999999999999987655 889999999999
Q ss_pred ccCCCCCCCC-ccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccC
Q 003926 234 ENNALGPQFP-KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 234 ~~N~l~~~~p-~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~ 312 (786)
++|.+++..+ ...++|+.|++++|.+++. ..+..+++|+.|++++|++++. +.+..+++|+.|++++|++++..+
T Consensus 229 ~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~ 304 (347)
T 4fmz_A 229 GNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDM 304 (347)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGH
T ss_pred cCCccCCCcchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcCh
Confidence 9999987655 2357899999999999874 4688999999999999999975 468999999999999999999999
Q ss_pred ccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccC
Q 003926 313 DDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 313 ~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~ 356 (786)
..+..+++|+.|++++|++++..| +..++++..+++++|.++
T Consensus 305 ~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 305 EVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999999998777 778899999999999874
No 306
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=1.8e-25 Score=252.36 Aligned_cols=256 Identities=23% Similarity=0.299 Sum_probs=140.3
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|+++++.+.+.. + +.++++|++|+|++|.+.+..+ ++++++|++|+|++|.+++..+ +.+
T Consensus 68 ~~L~~L~Ls~n~l~~~~----------~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~ 132 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDIT----------P-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKN 132 (466)
T ss_dssp TTCCEEECCSSCCCCCG----------G-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred cCCCEEECCCCccCCch----------h-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcC
Confidence 46778888877655432 1 5567777777777777766554 6777777777777777765432 667
Q ss_pred CCCCcEEEcccccCCCCCCc--------------------ccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCC
Q 003926 154 LTSLQTLILDENMLAGRVPD--------------------WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNN 213 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~--------------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 213 (786)
+++|++|+|++|.+++ +|. .+.++++|+.|++++|.+.+. ..+..+++|+.|++++|
T Consensus 133 l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 209 (466)
T 1o6v_A 133 LTNLNRLELSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 209 (466)
T ss_dssp CTTCSEEEEEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred CCCCCEEECCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCC
Confidence 7777777777776654 221 134444455555555554432 22444555555555555
Q ss_pred cCCcCCCCCCCCCcCCEEEcccCCCCCCCCc--cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhh
Q 003926 214 HFYGEVPDFSGLTYLQVLDLENNALGPQFPK--VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL 291 (786)
Q Consensus 214 ~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 291 (786)
.+++..| ++.+++|+.|++++|.+++. +. ..++|+.|++++|.+++..| +..+++|+.|+|++|++++..| +
T Consensus 210 ~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~ 283 (466)
T 1o6v_A 210 QISDITP-LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L 283 (466)
T ss_dssp CCCCCGG-GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--G
T ss_pred ccccccc-ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--c
Confidence 5544333 44445555555555554432 11 12445555555555554433 5555555555555555554332 5
Q ss_pred CCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 292 ~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+.+++.+++++|.+.+
T Consensus 284 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 284 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp TTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred cCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 555555555555555554433 4455555555555555555444 3445555555555555543
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.93 E-value=2.8e-25 Score=233.71 Aligned_cols=224 Identities=21% Similarity=0.169 Sum_probs=195.3
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 189 (786)
+.++.+++++... |..+ .++|+.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 5788888888654 4333 468999999999999888888999999999999999999888889999999999999999
Q ss_pred c-CcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhh
Q 003926 190 M-FNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV 267 (786)
Q Consensus 190 ~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~ 267 (786)
. +....|..|..+++|++|+|++|.+++..|. |.++++|++|+|++|.++ +..+..|
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------------~~~~~~~ 149 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ---------------------ALPDDTF 149 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTTTT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc---------------------ccCHhHh
Confidence 7 7776688899999999999999999887664 778888888888877764 3445567
Q ss_pred cCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcE
Q 003926 268 SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRV 347 (786)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~ 347 (786)
..+++|+.|+|++|++++..+..|..+++|+.|++++|++++..|..+..+++|+.|++++|.+++..+..+....++..
T Consensus 150 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 229 (285)
T 1ozn_A 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (285)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred ccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCE
Confidence 88999999999999999877778999999999999999999999999999999999999999999877777888999999
Q ss_pred EEcCCcccCC
Q 003926 348 VLYARNCLAA 357 (786)
Q Consensus 348 ~~~~~N~l~~ 357 (786)
+++++|.+.+
T Consensus 230 L~l~~N~~~c 239 (285)
T 1ozn_A 230 LRLNDNPWVC 239 (285)
T ss_dssp EECCSSCEEC
T ss_pred EeccCCCccC
Confidence 9999998865
No 308
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=1.6e-27 Score=273.78 Aligned_cols=182 Identities=9% Similarity=0.053 Sum_probs=127.1
Q ss_pred ccCCCCCceeEEEE-ecCCcEEEEEEecccCC----------CChHHHHHHHHHHhcC-CCCCcceeeeeeeeccccCCC
Q 003926 484 FMGEGSQGQMYRGR-LKNGTFVAIRCLKMKKC----------HSTRNFMHHIELISKL-RHRHLVSALGHCFECYFDDSS 551 (786)
Q Consensus 484 ~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~----------~~~~~f~~E~~~l~~l-~H~NIv~l~g~~~~~~~~~~~ 551 (786)
..+.|++|.+++++ .-.|+.||||++..... ...++|.+|+++|+++ .|+||+++++++.+
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed------- 313 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN------- 313 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-------
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-------
Confidence 46778888777765 34589999999975421 1135699999999999 79999999998865
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
.+..||||||++||+|.++|.+. ..++.. +|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||
T Consensus 314 ~~~~yLVMEyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFG 384 (569)
T 4azs_A 314 AQSGWLVMEKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFG 384 (569)
T ss_dssp SSEEEEEEECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecc
Confidence 46799999999999999999864 245543 4889999999999998 99999999999999999999999999
Q ss_pred cccccccc-cccccccccccccCccccccCCCCcccceeehhHHHHHHHhCC
Q 003926 632 LPLLAENA-EKVGHVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIVGR 682 (786)
Q Consensus 632 l~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~ElltG~ 682 (786)
+++..... ......+|+.+|++||.+. +.+..++|+||+|++++++.+|.
T Consensus 385 lAr~~~~~~~~~~t~vGTp~YmAPE~l~-g~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 385 SIVTTPQDCSWPTNLVQSFFVFVNELFA-ENKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp TEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cCeeCCCCCccccCceechhhccHHHhC-CCCCCcccccccccchhhhcccc
Confidence 99765432 2334567889999999875 46778999999999988886653
No 309
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=3.5e-25 Score=249.96 Aligned_cols=256 Identities=23% Similarity=0.265 Sum_probs=165.9
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++.++.+.. +| .+..+++|++|+|++|.+.+..+ +.++++|++|+|++|.+++..| +.+
T Consensus 46 ~~l~~L~l~~~~i~~-l~----------~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~ 110 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID----------GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LAN 110 (466)
T ss_dssp HTCCEEECCSSCCCC-CT----------TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTT
T ss_pred ccccEEecCCCCCcc-Cc----------chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcC
Confidence 367888888876542 22 36689999999999999988765 9999999999999999997655 999
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCE---------------------EEccC
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV---------------------LALSN 212 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~---------------------L~Ls~ 212 (786)
+++|++|+|++|.+++..+ +..+++|++|++++|.+.+ ++ .++++++|+. |++++
T Consensus 111 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~ 186 (466)
T 1o6v_A 111 LTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISS 186 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCS
T ss_pred CCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecCCcccCchhhccCCCCCEEECcC
Confidence 9999999999999986543 9999999999999999886 33 3555555554 45555
Q ss_pred CcCCcCCCCCCCCCcCCEEEcccCCCCCCCCc-cccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhh
Q 003926 213 NHFYGEVPDFSGLTYLQVLDLENNALGPQFPK-VGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQAL 291 (786)
Q Consensus 213 N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~-~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 291 (786)
|.+++ ++.+..+++|++|++++|.+.+..|. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..| +
T Consensus 187 n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 261 (466)
T 1o6v_A 187 NKVSD-ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L 261 (466)
T ss_dssp SCCCC-CGGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CcCCC-ChhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--h
Confidence 54443 23344455555555555555444331 124455555555555432 234555555555555555554433 5
Q ss_pred CCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 292 LSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 292 ~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+.+++.+++++|.+.+
T Consensus 262 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp TTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSC
T ss_pred hcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCC
Confidence 555555555555555554433 4555555555555555554333 4445555555555555544
No 310
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=3.8e-25 Score=230.74 Aligned_cols=215 Identities=25% Similarity=0.288 Sum_probs=123.8
Q ss_pred CCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCE
Q 003926 56 TEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEI 135 (786)
Q Consensus 56 ~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~ 135 (786)
.++|.|.| ..+.|. ..++.++++++.++. +|. .+. ++|+.|+|++|++.+..+..|.++++|++
T Consensus 2 ~~~C~~~~---~~C~c~-~~~~~l~~~~~~l~~-ip~---------~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~ 65 (270)
T 2o6q_A 2 EALCKKDG---GVCSCN-NNKNSVDCSSKKLTA-IPS---------NIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRL 65 (270)
T ss_dssp CCCBGGGT---CSBEEE-TTTTEEECTTSCCSS-CCS---------CCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCE
T ss_pred CccCCCCC---CCCEeC-CCCCEEEccCCCCCc-cCC---------CCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCE
Confidence 47899975 234453 345567777766553 332 111 45677777777777666666777777777
Q ss_pred EeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcC
Q 003926 136 LNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215 (786)
Q Consensus 136 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 215 (786)
|+|++|.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|+.|+|++|.+
T Consensus 66 L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 145 (270)
T 2o6q_A 66 LYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL 145 (270)
T ss_dssp EECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcC
Confidence 77777777655555566677777777777776655555666666666666666666665555566666666666666666
Q ss_pred CcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCC
Q 003926 216 YGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSL 294 (786)
Q Consensus 216 ~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 294 (786)
++..+. |..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++..+..|..+
T Consensus 146 ~~~~~~~~~~l~~L~~L~L~~n~l~---------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 204 (270)
T 2o6q_A 146 QSLPKGVFDKLTSLKELRLYNNQLK---------------------RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204 (270)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCS---------------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CccCHhHccCCcccceeEecCCcCc---------------------EeChhHhccCCCcCEEECCCCcCCcCCHHHhccc
Confidence 554433 445555555555444432 2222234444445555555554444333344444
Q ss_pred CCCcEEEeecCCC
Q 003926 295 PSITYLNIADNKL 307 (786)
Q Consensus 295 ~~L~~L~l~~N~l 307 (786)
++|+.|+|++|.+
T Consensus 205 ~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 205 EKLKMLQLQENPW 217 (270)
T ss_dssp TTCCEEECCSSCB
T ss_pred cCCCEEEecCCCe
Confidence 4444444444443
No 311
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.93 E-value=6e-25 Score=246.32 Aligned_cols=225 Identities=29% Similarity=0.391 Sum_probs=145.8
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .++++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 577777777777776 55 47777777777777777775 45432 477777777777765 45 4677777777777
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhh
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAE 266 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~ 266 (786)
++|.+++ +|... ++|+.|++++|.++ .+|.++.+++|++|++++|++++ +|....+|+.|++++|++++ +|..
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSC-CCCC
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccc-cCcc
Confidence 7777765 44322 46666777777666 45566666667777776666654 33344556666666666654 3322
Q ss_pred hcCccccceeeccCccccC--CCchhh-------------CCC-CCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCc
Q 003926 267 VSSYYQLQRLDLSSNRFVG--PFPQAL-------------LSL-PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNL 330 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~--~~p~~~-------------~~l-~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~ 330 (786)
+++|+.|++++|++++ .+|..+ ..+ ++|+.|++++|++++ +|.. +++|+.|++++|+
T Consensus 276 ---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~ 348 (454)
T 1jl5_A 276 ---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNH 348 (454)
T ss_dssp ---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSC
T ss_pred ---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCc
Confidence 2445555555555544 222211 123 478888888888886 5543 4788899999998
Q ss_pred CCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 331 LTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 331 l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
++ .+|. ....++.+++++|.+++
T Consensus 349 l~-~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 349 LA-EVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CS-CCCC---CCTTCCEEECCSSCCSS
T ss_pred cc-cccc---hhhhccEEECCCCCCCc
Confidence 88 4666 35678889999998887
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.8e-25 Score=258.32 Aligned_cols=272 Identities=25% Similarity=0.286 Sum_probs=170.8
Q ss_pred CCCCCCCCCCCCCCCC---CCccEEeCCCCEEEEEeCCCCCCCCCCCCCc---------CC---ccccccCCCCCCCEEE
Q 003926 49 LSSWNITTEFCNTEPT---SSLTVVCYEESITQLHIVGNKRAPMLPLSFS---------MD---SFVTTLVKLPDLKVLR 113 (786)
Q Consensus 49 l~~W~~~~~~C~w~~~---~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~---------~~---~~~~~l~~l~~L~~L~ 113 (786)
.++|..+.+||.|.+. ....+.|....++.|+++++.++ .+|..+. .+ .+|. .+++|++|+
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~~~L~~L~L~~N~l~~lp~---~l~~L~~L~ 87 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLPAHITTLVIPDNNLTSLPA---LPPELRTLE 87 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCCTTCSEEEECSCCCSCCCC---CCTTCCEEE
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhCCCCcEEEecCCCCCCCCC---cCCCCCEEE
Confidence 3567766788888531 11123454556888898888766 4443211 00 1111 344555555
Q ss_pred ccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcc
Q 003926 114 LVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNG 193 (786)
Q Consensus 114 L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 193 (786)
|++|.+++ +|. .+++|++|+|++|.+++. |. .+++|+.|+|++|++++ +|.. +++|++|+|++|.+++
T Consensus 88 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 88 VSGNQLTS-LPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp ECSCCCSC-CCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCCcCCc-CCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC
Confidence 55555543 222 445555555555555532 22 34555555555555543 3332 2555555555555553
Q ss_pred cCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCcccc
Q 003926 194 TLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQL 273 (786)
Q Consensus 194 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L 273 (786)
+|. .+++|+.|++++|.+++ +| ..+++|+.|+|++|.+++ +|....+|+.|++++|.++. +|. .+++|
T Consensus 156 -l~~---~~~~L~~L~L~~N~l~~-l~--~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~-l~~---~~~~L 223 (622)
T 3g06_A 156 -LPA---LPSELCKLWAYNNQLTS-LP--MLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-LPA---LPSGL 223 (622)
T ss_dssp -CCC---CCTTCCEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-CCC---CCTTC
T ss_pred -cCC---ccCCCCEEECCCCCCCC-Cc--ccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccc-cCC---CCCCC
Confidence 232 23445555555555554 22 334778888888888875 45556778888888888864 443 24779
Q ss_pred ceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 274 QRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 274 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
+.|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+..++++..+++++|
T Consensus 224 ~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N 294 (622)
T 3g06_A 224 KELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 294 (622)
T ss_dssp CEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSC
T ss_pred CEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCC
Confidence 999999999986 55 566889999999999985 454 5678999999999999 78888888899999999999
Q ss_pred ccCC
Q 003926 354 CLAA 357 (786)
Q Consensus 354 ~l~~ 357 (786)
.+++
T Consensus 295 ~l~~ 298 (622)
T 3g06_A 295 PLSE 298 (622)
T ss_dssp CCCH
T ss_pred CCCC
Confidence 8875
No 313
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.93 E-value=2e-24 Score=242.11 Aligned_cols=223 Identities=28% Similarity=0.373 Sum_probs=153.0
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|++++|.+++. |.. .++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ ++|++|++
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 6778888888877663 211 1678888888888876 66 58888888888888888875 55433 47888888
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCcc--ccchhhhhccCCccCCcCh
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV--GKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~N~l~~~~p 264 (786)
++|.+++ +| .|+++++|+.|++++|.+++ +|.+ .++|++|++++|.++ .+|.. .++|+.|++++|++++ +|
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~--~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~ 253 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL--PLSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LP 253 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC--CTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC--cCcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-cc
Confidence 8888876 55 57888888888888888876 3332 247888888888877 45543 3577888888888875 44
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc--ccCccCC-------------CC-CCCCEEeCcC
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG--KLFDDLS-------------CN-PELGFVDLSS 328 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g--~~~~~~~-------------~~-~~L~~l~ls~ 328 (786)
.. +++|+.|++++|++++ +|.. +++|+.|++++|++++ .+|..+. .+ ++|+.|++++
T Consensus 254 ~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~ 326 (454)
T 1jl5_A 254 DL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSN 326 (454)
T ss_dssp SC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCS
T ss_pred cc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCC
Confidence 32 3678888888888876 4543 3667777777777766 3332221 12 4677777777
Q ss_pred CcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 329 NLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 329 N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
|++++ +|.. ...++.+++++|.++.
T Consensus 327 N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 327 NKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp SCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred Ccccc-cccc---CCcCCEEECCCCcccc
Confidence 77775 5554 3567778888887764
No 314
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=6.7e-25 Score=229.65 Aligned_cols=208 Identities=23% Similarity=0.161 Sum_probs=171.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47899999999999888888999999999999999999888888999999999999999999888889999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcC-CC-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE-VP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
++|.+.+..+..|+++++|+.|+|++|.+++. +| .|..+++|++|+|++|.+++ ..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~---------------------~~~ 166 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---------------------IYC 166 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE---------------------ECG
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc---------------------CCH
Confidence 99999987777899999999999999999873 35 48888888888888887753 333
Q ss_pred hhhcCccccc----eeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCC
Q 003926 265 AEVSSYYQLQ----RLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (786)
Q Consensus 265 ~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p 336 (786)
..+..+.+|+ .|++++|++++..+..+ ...+|+.|++++|++++..+..+..+++|+.|++++|++++..|
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 4444444454 78888888886555444 44578888888888887777777888888888888888887655
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=6.1e-27 Score=250.38 Aligned_cols=241 Identities=23% Similarity=0.222 Sum_probs=203.1
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+..+++|++|+|++|.+++..|..|.++++|+.|+|++|.+++..| +..+++|++|+|++|++++.. .+++|+
T Consensus 30 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~ 102 (317)
T 3o53_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIE 102 (317)
T ss_dssp HTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCC
T ss_pred hccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcC
Confidence 4467899999999999999988999999999999999999987665 999999999999999997533 348999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCcc----ccchhhhhccCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKV----GKKLVTMILSKN 257 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~~----~~~L~~L~ls~N 257 (786)
.|++++|.+++..+. .+++|+.|++++|++++..+ .+..+++|++|+|++|.+++..+.. .++|+.|++++|
T Consensus 103 ~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 179 (317)
T 3o53_A 103 TLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (317)
T ss_dssp EEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCC
Confidence 999999999976554 36789999999999998776 4888999999999999998765543 368999999999
Q ss_pred ccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC-ccCC
Q 003926 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT-GQLP 336 (786)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~-g~~p 336 (786)
.+++. | ....+++|+.|+|++|+|++. |..+..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++ +.+|
T Consensus 180 ~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~ 255 (317)
T 3o53_A 180 FIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (317)
T ss_dssp CCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHH
T ss_pred cCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHH
Confidence 99876 3 234588999999999999964 5558999999999999999995 6778889999999999999998 7788
Q ss_pred hhhhcCCCCcEEEcCCc-ccCC
Q 003926 337 NCLLAGSKNRVVLYARN-CLAA 357 (786)
Q Consensus 337 ~~~~~~~~~~~~~~~~N-~l~~ 357 (786)
..+.....+..+.+..| .+.|
T Consensus 256 ~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 256 DFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHhccccceEEECCCchhccC
Confidence 88777766666666633 3444
No 316
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=8.8e-25 Score=228.22 Aligned_cols=207 Identities=25% Similarity=0.243 Sum_probs=158.0
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+..+++|+.|++++|.+... ..+..+++|++|+|++|.+++. +.+..+++|++|+|++|.+++..+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 44667777888887777643 2467777888888888887763 3677777888888888887776666777778888
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCC
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~ 261 (786)
+|+|++|.+++..+..|+++++|++|+|++|++++.++. |..+++|+.|+|++|+++ +
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------------~ 171 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ---------------------S 171 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------C
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC---------------------c
Confidence 888888877776666677777788888887777766554 567777777777666654 4
Q ss_pred cChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc
Q 003926 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (786)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 341 (786)
..+..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+.+. ++.|+.++++.|.++|.+|..++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 4555677888999999999999988888888999999999999988764 446888899999999999987654
No 317
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.92 E-value=2.4e-24 Score=249.58 Aligned_cols=244 Identities=19% Similarity=0.199 Sum_probs=150.8
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 46666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCc-CCC-CCCCCCcCCEEEcccCCCCCCCCccc---cch----hhhhccCCc
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYG-EVP-DFSGLTYLQVLDLENNALGPQFPKVG---KKL----VTMILSKNK 258 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p-~~~~l~~L~~L~L~~N~l~~~~p~~~---~~L----~~L~ls~N~ 258 (786)
+|.+++..+..|+++++|++|+|++|.+++ .+| .|+++++|++|++++|.+++..+... .+| ..+++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 666665444456666666666666666665 234 36666666666666666665554432 233 445666666
Q ss_pred cCCcChhhhcCccccceeeccCc---------------------------------------------------------
Q 003926 259 FRSAIPAEVSSYYQLQRLDLSSN--------------------------------------------------------- 281 (786)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N--------------------------------------------------------- 281 (786)
+++..|..+... +|+.|+|++|
T Consensus 189 l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 189 MNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred ceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 666555555444 4555555554
Q ss_pred -cccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 282 -RFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 282 -~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+.+.+|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.++ .+|. .....++.+.+.+|.+.+
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 344455566666666777777766666 355555555 6666666666666 4554 244556666666665543
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=1.2e-25 Score=240.41 Aligned_cols=236 Identities=20% Similarity=0.164 Sum_probs=204.5
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+++.++++.+.+...+...+..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45667788888877777777888999999999999999888999999999999999999987665 9999999999999
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCCcCh
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p 264 (786)
+|.+++.. ..++|+.|++++|.+++..+. .+++|+.|++++|.+++..+.. .++|+.|++++|.+++..|
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 99998633 348999999999999887654 3688999999999998876644 4789999999999999888
Q ss_pred hhh-cCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCC
Q 003926 265 AEV-SSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGS 343 (786)
Q Consensus 265 ~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~ 343 (786)
..+ ..+++|+.|+|++|+|++. |. ...+++|+.|+|++|++++..+ .+..+++|+.|+|++|+++ .+|..+....
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 777 4789999999999999865 33 3459999999999999997544 5888999999999999999 5788888888
Q ss_pred CCcEEEcCCcccC
Q 003926 344 KNRVVLYARNCLA 356 (786)
Q Consensus 344 ~~~~~~~~~N~l~ 356 (786)
++..+++++|.+.
T Consensus 238 ~L~~L~l~~N~~~ 250 (317)
T 3o53_A 238 NLEHFDLRGNGFH 250 (317)
T ss_dssp TCCEEECTTCCCB
T ss_pred CCCEEEccCCCcc
Confidence 9999999999886
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.5e-23 Score=218.70 Aligned_cols=203 Identities=23% Similarity=0.236 Sum_probs=167.1
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+++.+++++++++. +|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 57789999998875 455443 678999999999988777788899999999999999886666677888999999999
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhh
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAE 266 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~ 266 (786)
+|.+++..+..|.++++|+.|+|++|++++..+. |..+++|++|+|++|.++ +..+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~---------------------~~~~~~ 152 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ---------------------SLPKGV 152 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTTT
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC---------------------ccCHhH
Confidence 9998877777788888899999999888877665 678888888888777664 333445
Q ss_pred hcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 267 VSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+...
T Consensus 153 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 153 FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 77888999999999999987777888999999999999999987777788888999999999988654
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=2.2e-25 Score=252.27 Aligned_cols=195 Identities=24% Similarity=0.175 Sum_probs=142.8
Q ss_pred CCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEE
Q 003926 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 209 (786)
+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++.+| |+.+++|++|+|++|.+++..+ .++|+.|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3466667777666666666666666666666666666665444 6666666666666666554221 24555555
Q ss_pred ccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCch
Q 003926 210 LSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQ 289 (786)
Q Consensus 210 Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 289 (786)
|++|.+++. .+..+++|+.|++++|.+++..|..++++++|+.|+|++|.|++.+|.
T Consensus 106 L~~N~l~~~-----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (487)
T 3oja_A 106 AANNNISRV-----------------------SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (487)
T ss_dssp CCSSCCCCE-----------------------EECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGG
T ss_pred CcCCcCCCC-----------------------CccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChH
Confidence 555555543 333334555556666666677788889999999999999999999998
Q ss_pred hhC-CCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 290 ALL-SLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 290 ~~~-~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+. .+++|+.|+|++|.|++..+ ...+++|+.|+|++|.+++..| .+..+..+..+++++|.+++
T Consensus 163 ~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 163 ELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp GGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE
T ss_pred HHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc
Confidence 887 89999999999999998743 3468999999999999997544 58888999999999999986
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1.2e-23 Score=220.15 Aligned_cols=221 Identities=19% Similarity=0.166 Sum_probs=187.4
Q ss_pred EccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCc
Q 003926 113 RLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFN 192 (786)
Q Consensus 113 ~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 192 (786)
+..+.++.. +|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 13 ~c~~~~l~~-ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCCSS-CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCccc-cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 333444432 344443 57999999999999888889999999999999999999888889999999999999999999
Q ss_pred ccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCcc
Q 003926 193 GTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYY 271 (786)
Q Consensus 193 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~ 271 (786)
+..+..|.++++|++|++++|.+++..+ .+..+++|++|++++|.+++ ..+|..+.+++
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--------------------~~l~~~~~~l~ 149 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS--------------------FKLPEYFSNLT 149 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC--------------------CCCCGGGGGCT
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccce--------------------ecCchhhccCC
Confidence 9888899999999999999999988766 48889999999988887642 13577889999
Q ss_pred ccceeeccCccccCCCchhhCCCCCCc----EEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcE
Q 003926 272 QLQRLDLSSNRFVGPFPQALLSLPSIT----YLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRV 347 (786)
Q Consensus 272 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~ 347 (786)
+|+.|+|++|++++..+..+..+++|+ .|++++|++++..+..+. ..+|+.|++++|++++..+..+....++..
T Consensus 150 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 228 (276)
T 2z62_A 150 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQK 228 (276)
T ss_dssp TCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCE
T ss_pred CCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccE
Confidence 999999999999998888887777777 899999999987666654 458999999999999776667778899999
Q ss_pred EEcCCcccCC
Q 003926 348 VLYARNCLAA 357 (786)
Q Consensus 348 ~~~~~N~l~~ 357 (786)
+++++|.+.+
T Consensus 229 L~l~~N~~~c 238 (276)
T 2z62_A 229 IWLHTNPWDC 238 (276)
T ss_dssp EECCSSCBCC
T ss_pred EEccCCcccc
Confidence 9999999876
No 322
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.7e-23 Score=218.82 Aligned_cols=203 Identities=26% Similarity=0.252 Sum_probs=141.1
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 181 (786)
.+.++++|+.+++++|+++.. |..+. ++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 356777888888888888654 43343 5778888888888877777788888888888888887754332 677788
Q ss_pred CEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccC
Q 003926 182 AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFR 260 (786)
Q Consensus 182 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~ 260 (786)
++|+|++|.++ .+|..+.++++|++|+|++|++++.++. |.++++|++|+|++|+++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~--------------------- 137 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK--------------------- 137 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC---------------------
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC---------------------
Confidence 88888888877 5677777777888888888877766654 677777777777666654
Q ss_pred CcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC
Q 003926 261 SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 261 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 332 (786)
+..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..++.|+.++|++|.+.
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 233334556667777777777776555555666777777777777776 45555555566666666666664
No 323
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=2.6e-25 Score=253.94 Aligned_cols=181 Identities=13% Similarity=0.164 Sum_probs=141.3
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCCC--------hHHHHHHHHHHhcCCCCCcceeeeeeeeccccCCCC
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHS--------TRNFMHHIELISKLRHRHLVSALGHCFECYFDDSSV 552 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--------~~~f~~E~~~l~~l~H~NIv~l~g~~~~~~~~~~~~ 552 (786)
..+.||+|+||+||+|.. .+..+|+|+........ .+.|.+|++++++++||||+++..++.. .
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-------~ 411 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-------L 411 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------T
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------C
Confidence 457899999999999954 47889999876543221 2458999999999999999966666553 2
Q ss_pred ceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCceeecCCCcccccCCCc
Q 003926 553 SRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITDILLDQNLVAKISSYNL 632 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl 632 (786)
+..|+|||||++|+|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+
T Consensus 412 ~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGl 475 (540)
T 3en9_A 412 DNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGL 475 (540)
T ss_dssp TTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTT
T ss_pred CccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECcc
Confidence 346999999999999999864 457899999999999997 9999999999999999 999999999
Q ss_pred ccccccccc--------cccccccccccCcccccc--CCCCcccceeehhHHHHHHHhCCCCC
Q 003926 633 PLLAENAEK--------VGHVIPYSGSIDPTNSAR--GKLEEKIDIYDFGLILLEIIVGRPLK 685 (786)
Q Consensus 633 ~~~~~~~~~--------~~~~~~~~~~~aPe~~~~--~~~t~ksDVwSfGvvl~ElltG~~p~ 685 (786)
++....... .....++..|+|||.+.. ..|+.++|+||..+-.+|.+.++.++
T Consensus 476 a~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 476 GKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 976654321 124567889999999865 55888999999999888888777655
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2.4e-23 Score=217.31 Aligned_cols=205 Identities=26% Similarity=0.266 Sum_probs=176.3
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccC
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.|++.++.+.. + ..+..+++|++|+|++|.+.+. ..+..+++|++|+|++|.+++..+..|.+
T Consensus 41 ~~L~~L~l~~~~i~~-~----------~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 107 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS-V----------QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDK 107 (272)
T ss_dssp TTCCEEECTTSCCCC-C----------TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred cceeeeeeCCCCccc-c----------cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcC
Confidence 467888888876442 1 2467899999999999999884 47999999999999999999988888999
Q ss_pred CCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEE
Q 003926 154 LTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLD 232 (786)
Q Consensus 154 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ 232 (786)
+++|++|+|++|++++..|..|+.+++|++|+|++|.+++..+..|+++++|+.|+|++|++++.++. |..+++|+.|+
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 99999999999999988888899999999999999999988888899999999999999999987775 68899999999
Q ss_pred cccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccC
Q 003926 233 LENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 233 L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~ 312 (786)
|++|.++ +..|..+..+++|+.|+|++|.+.+. +++|+.|+++.|+++|.+|
T Consensus 188 L~~N~l~---------------------~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 188 LYQNQLK---------------------SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CCSSCCS---------------------CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBB
T ss_pred CCCCcCC---------------------ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCccc
Confidence 8888765 44455577788899999999988754 4578888899999999998
Q ss_pred ccCCCCC
Q 003926 313 DDLSCNP 319 (786)
Q Consensus 313 ~~~~~~~ 319 (786)
..++.++
T Consensus 240 ~~~~~~~ 246 (272)
T 3rfs_A 240 NSAGSVA 246 (272)
T ss_dssp CTTSCBC
T ss_pred CcccccC
Confidence 8876554
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=8.6e-23 Score=214.97 Aligned_cols=205 Identities=24% Similarity=0.189 Sum_probs=175.1
Q ss_pred cCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC
Q 003926 126 KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (786)
Q Consensus 126 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 205 (786)
.++++++|+.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+ .+.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcC
Confidence 3677889999999999998 4565553 688999999999988888889999999999999999886543 2788899
Q ss_pred CEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccC
Q 003926 206 RVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG 285 (786)
Q Consensus 206 ~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 285 (786)
+.|+|++|+++..+..+..+++|++|+|++|+++ +..|..|..+++|+.|+|++|+|++
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~---------------------~l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT---------------------SLPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC---------------------CCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCc---------------------ccCHHHHcCCCCCCEEECCCCCCCc
Confidence 9999999998855555778888888888777664 4455678889999999999999998
Q ss_pred CCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 286 PFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 286 ~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++ .+|..+.....+..+.+.+|.+.+
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 88888999999999999999999877777889999999999999999 788888888899999999998764
No 326
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.90 E-value=8e-23 Score=236.23 Aligned_cols=209 Identities=27% Similarity=0.255 Sum_probs=179.4
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.+++|++|+|++|.+++..+ .+++|+.|+|++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|
T Consensus 99 ~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L 166 (622)
T 3g06_A 99 LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKL 166 (622)
T ss_dssp CCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEE
T ss_pred CCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEE
Confidence 67899999999999988543 67899999999999986 5543 5899999999999985 454 45789999
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
++++|.+++ +| ..+++|+.|+|++|.+++..+ .+++|+.|++++|.++. +|...++|+.|++++|+|++ +|
T Consensus 167 ~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~~-l~~~~~~L~~L~Ls~N~L~~-lp 237 (622)
T 3g06_A 167 WAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT---LPSELYKLWAYNNRLTS-LPALPSGLKELIVSGNRLTS-LP 237 (622)
T ss_dssp ECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCSC-CC
T ss_pred ECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC---ccchhhEEECcCCcccc-cCCCCCCCCEEEccCCccCc-CC
Confidence 999999996 66 457899999999999997443 24799999999999984 55667899999999999987 56
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcC
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAG 342 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~ 342 (786)
..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+...
T Consensus 238 ---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 238 ---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred ---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 567899999999999995 665 6789999999999999 678889999999999999999999999877543
No 327
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5.6e-24 Score=226.62 Aligned_cols=222 Identities=20% Similarity=0.188 Sum_probs=157.9
Q ss_pred CCCCCEEEccCCCCccCCCc---cCCCCCCCCEEeccCCCCCCCCCccc--cCCCCCcEEEcccccCCCCCC----cccC
Q 003926 106 LPDLKVLRLVSLGLWGPLSG---KISRLSSLEILNMSSNFLNGAIPQEL--SILTSLQTLILDENMLAGRVP----DWLG 176 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~ 176 (786)
-..++.|.+.++.+....-. .+..+++|+.|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34578888888877532110 12235679999999999999999888 899999999999999988666 4456
Q ss_pred CCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcC---CCC--CCCCCcCCEEEcccCCCCCCCC------cc
Q 003926 177 SLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE---VPD--FSGLTYLQVLDLENNALGPQFP------KV 245 (786)
Q Consensus 177 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~--~~~l~~L~~L~L~~N~l~~~~p------~~ 245 (786)
.+++|++|+|++|.+.+..|..|+++++|++|+|++|++.+. .+. +..+++|++|+|++|+++...+ ..
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 789999999999999988888999999999999999998762 222 4678889999998888853211 11
Q ss_pred ccchhhhhccCCccCCcChhhhcCc---cccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCC
Q 003926 246 GKKLVTMILSKNKFRSAIPAEVSSY---YQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELG 322 (786)
Q Consensus 246 ~~~L~~L~ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~ 322 (786)
.++|++|+|++|+|++.+|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 2556666666666666656555555 46666666666666 4555543 5666666666666653 21 34556666
Q ss_pred EEeCcCCcCC
Q 003926 323 FVDLSSNLLT 332 (786)
Q Consensus 323 ~l~ls~N~l~ 332 (786)
.|+|++|+++
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 6666666665
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=6.8e-23 Score=209.54 Aligned_cols=195 Identities=18% Similarity=0.210 Sum_probs=150.1
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCC-CCCCCCccccCCCCCcEEEccc-ccCCCCCCcccCCCCCCCEEE
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF-LNGAIPQELSILTSLQTLILDE-NMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 185 (786)
+|++|+|++|++++..+..|.++++|+.|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78899999999998888889999999999999997 8877777889999999999998 899877778889999999999
Q ss_pred ccCCcCcccCCccccCCCCCC---EEEccCC-cCCcCCCC-CCCCCcCC-EEEcccCCCCCCCCccccchhhhhccCCcc
Q 003926 186 LRNNMFNGTLPDSFSYLENLR---VLALSNN-HFYGEVPD-FSGLTYLQ-VLDLENNALGPQFPKVGKKLVTMILSKNKF 259 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~-~~~l~~L~-~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l 259 (786)
+++|.+++ +|. |..+++|+ .|++++| .+++..+. |.++++|+ .|++++|.++. +|
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~-i~---------------- 172 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQ---------------- 172 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE-EC----------------
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc-cC----------------
Confidence 99999886 666 88888888 9999998 88776664 78888888 88888877641 11
Q ss_pred CCcChhhhcCccccceeeccCcc-ccCCCchhhCCC-CCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCC
Q 003926 260 RSAIPAEVSSYYQLQRLDLSSNR-FVGPFPQALLSL-PSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329 (786)
Q Consensus 260 ~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N 329 (786)
+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 173 ----~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 173 ----GYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp ----TTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred ----HhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 112222 567777777773 766556667777 7777777777777644332 4566677776654
No 329
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=223.68 Aligned_cols=200 Identities=22% Similarity=0.203 Sum_probs=172.8
Q ss_pred CCCCCCEEEccCCCCccCCCccC--CCCCCCCEEeccCCCCCCCCC----ccccCCCCCcEEEcccccCCCCCCcccCCC
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKI--SRLSSLEILNMSSNFLNGAIP----QELSILTSLQTLILDENMLAGRVPDWLGSL 178 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 178 (786)
.+++|++|+|++|.+.+.+|..+ ..+++|+.|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 45779999999999999999998 999999999999999998766 455689999999999999999889999999
Q ss_pred CCCCEEEccCCcCccc--C--CccccCCCCCCEEEccCCcCCcCCCC----CCCCCcCCEEEcccCCCCCCCCcc---c-
Q 003926 179 PILAVLSLRNNMFNGT--L--PDSFSYLENLRVLALSNNHFYGEVPD----FSGLTYLQVLDLENNALGPQFPKV---G- 246 (786)
Q Consensus 179 ~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~l~~L~~L~L~~N~l~~~~p~~---~- 246 (786)
++|++|+|++|++.+. + +..++.+++|++|+|++|+++...+. +..+++|++|+|++|.+++..|.. .
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 9999999999998752 2 23347899999999999999743321 467899999999999999886642 2
Q ss_pred --cchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 247 --KKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 247 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
++|+.|++++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 58999999999998 6777764 7999999999999974 43 6888999999999999975
No 330
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=4.9e-25 Score=242.48 Aligned_cols=243 Identities=21% Similarity=0.255 Sum_probs=171.4
Q ss_pred cccccCCCCCCCEEEccCCCCccCC----CccCCCCCCCCEEeccCC---CCCCCCCccc-------cCCCCCcEEEccc
Q 003926 99 FVTTLVKLPDLKVLRLVSLGLWGPL----SGKISRLSSLEILNMSSN---FLNGAIPQEL-------SILTSLQTLILDE 164 (786)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~n~l~g~~----~~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~~ 164 (786)
++..+..+++|++|+|++|.+++.. +..+..+++|+.|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 3445667888899999998887763 344778888999998885 4455666555 6788888888888
Q ss_pred ccCCC----CCCcccCCCCCCCEEEccCCcCcccCCcccc----CC---------CCCCEEEccCCcCC-cCCC----CC
Q 003926 165 NMLAG----RVPDWLGSLPILAVLSLRNNMFNGTLPDSFS----YL---------ENLRVLALSNNHFY-GEVP----DF 222 (786)
Q Consensus 165 N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p----~~ 222 (786)
|.+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|+.|+|++|+++ +.++ .+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 88876 4677788888888888888888644333333 33 78888888888876 3344 25
Q ss_pred CCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCcccc----CCCchhhCCCCCCc
Q 003926 223 SGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFV----GPFPQALLSLPSIT 298 (786)
Q Consensus 223 ~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~ 298 (786)
..+++|+.|+|++|.++.. .+...+|..+..+++|+.|+|++|.|+ +.+|..+..+++|+
T Consensus 184 ~~~~~L~~L~L~~n~l~~~----------------g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPE----------------GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp HHCTTCCEEECCSSCCCHH----------------HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred HhCCCcCEEECcCCCCCHh----------------HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 5667777777777766310 000123345667777888888888875 56777777788888
Q ss_pred EEEeecCCCCcc----cCccC--CCCCCCCEEeCcCCcCCc----cCChhh-hcCCCCcEEEcCCcccCC
Q 003926 299 YLNIADNKLTGK----LFDDL--SCNPELGFVDLSSNLLTG----QLPNCL-LAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 299 ~L~l~~N~l~g~----~~~~~--~~~~~L~~l~ls~N~l~g----~~p~~~-~~~~~~~~~~~~~N~l~~ 357 (786)
.|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ ..++++..+++++|.+++
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 888888887765 45555 337778888888888877 477766 446778888888887765
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=8.4e-22 Score=203.00 Aligned_cols=109 Identities=29% Similarity=0.268 Sum_probs=54.5
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|+.|+|++|++.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555555555555555555555555555555444445555555555555555554444444444444444444
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCC
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFY 216 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 216 (786)
+|.+++..+..|.++++|+.|+|++|+++
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCC
Confidence 44444433333444444444444444444
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.1e-21 Score=202.10 Aligned_cols=179 Identities=25% Similarity=0.213 Sum_probs=116.7
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
.+.++++++++.++.. |..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~~~-p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLDSV-PSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCSSC-CSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcccc-CCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 3456788888877643 44443 57788888888888777777777888888888888777777777777777777777
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChh
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~ 265 (786)
++|.+++..+..|..+++|++|+|++|.+++..+. |..+++|++|+|++|.++ +..+.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---------------------~~~~~ 149 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ---------------------SIPAG 149 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTT
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC---------------------ccCHH
Confidence 77777766666677777777777777777655543 455555555555555442 22233
Q ss_pred hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
.|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++
T Consensus 150 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 44555555566666665555555555555555555555555544
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=4.1e-22 Score=203.73 Aligned_cols=197 Identities=17% Similarity=0.203 Sum_probs=167.4
Q ss_pred CCCCEEeccCCCCCCCCCccccCCCCCcEEEccccc-CCCCCCcccCCCCCCCEEEccC-CcCcccCCccccCCCCCCEE
Q 003926 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM-LAGRVPDWLGSLPILAVLSLRN-NMFNGTLPDSFSYLENLRVL 208 (786)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 208 (786)
++|+.|+|++|++++..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |.+++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999998888899999999999999997 8877777899999999999998 99998888889999999999
Q ss_pred EccCCcCCcCCCCCCCCCcCC---EEEcccC-CCCCCCCccccchhhhhccCCccCCcChhhhcCccccc-eeeccCccc
Q 003926 209 ALSNNHFYGEVPDFSGLTYLQ---VLDLENN-ALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQ-RLDLSSNRF 283 (786)
Q Consensus 209 ~Ls~N~l~~~~p~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l 283 (786)
++++|.+++ +|.|..+++|+ +|++++| .+ ++..+..|.++++|+ .|+|++|++
T Consensus 111 ~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l---------------------~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 111 GIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYM---------------------TSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTC---------------------CEECTTTTTTTBSSEEEEECCSCCC
T ss_pred eCCCCCCcc-ccccccccccccccEEECCCCcch---------------------hhcCcccccchhcceeEEEcCCCCC
Confidence 999999987 66688888887 8877777 55 344556688899999 999999999
Q ss_pred cCCCchhhCCCCCCcEEEeecCC-CCcccCccCCCC-CCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 284 VGPFPQALLSLPSITYLNIADNK-LTGKLFDDLSCN-PELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 284 ~~~~p~~~~~l~~L~~L~l~~N~-l~g~~~~~~~~~-~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
+ .+|......++|+.|++++|+ +++..+..+..+ ++|+.|++++|++++ +|.. ....+..+.+.++
T Consensus 169 ~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 T-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp C-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred c-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 9 556554455899999999995 998778889999 999999999999995 4544 4556777777654
No 334
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.7e-22 Score=213.20 Aligned_cols=194 Identities=24% Similarity=0.338 Sum_probs=133.1
Q ss_pred CCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 104 VKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
.++++|++|++++|.+... | .+..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++. | .+..+++|+.
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCE
Confidence 4567778888888877653 3 47778888888888888775444 77788888888888887653 3 5777788888
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcC
Q 003926 184 LSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAI 263 (786)
Q Consensus 184 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~ 263 (786)
|+|++|.+++. | .+..+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++ +
T Consensus 112 L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~----------------------~ 166 (308)
T 1h6u_A 112 LDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD----------------------L 166 (308)
T ss_dssp EECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC----------------------C
T ss_pred EECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC----------------------C
Confidence 88888887753 3 27777888888888887775443 7777777777777776642 2
Q ss_pred hhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
+. +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++
T Consensus 167 ~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 167 TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 22 5556666666666666665433 6666667777777776665543 5666666777777666653
No 335
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=7.6e-22 Score=197.15 Aligned_cols=162 Identities=25% Similarity=0.210 Sum_probs=138.3
Q ss_pred CCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
.++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 35899999999999988888899999999999999999988777889999999999999999987777899999999999
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
|++|.+++..+..|.++++|+.|+|++|.+++.++. |..+++|++|+|++|.+.+..| +|+.|+++.|+++|.+|
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~----~l~~L~~~~n~~~g~ip 182 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWINKHSGVVR 182 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT----TTHHHHHHHHHCTTTBB
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC----CHHHHHHHHHhCCceee
Confidence 999999987777799999999999999999987775 7889999999999997764432 45566666666666666
Q ss_pred hhhcCcc
Q 003926 265 AEVSSYY 271 (786)
Q Consensus 265 ~~~~~l~ 271 (786)
.+++.++
T Consensus 183 ~~~~~l~ 189 (208)
T 2o6s_A 183 NSAGSVA 189 (208)
T ss_dssp CTTSSBC
T ss_pred ccCcccc
Confidence 5555443
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=7.6e-24 Score=230.74 Aligned_cols=245 Identities=22% Similarity=0.161 Sum_probs=124.2
Q ss_pred EEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCC----ccccCCC-CCcEEEcccccCCCCCCcccCCC-----CCC
Q 003926 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP----QELSILT-SLQTLILDENMLAGRVPDWLGSL-----PIL 181 (786)
Q Consensus 112 L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 181 (786)
++|+.|+++|.+|..+...++|+.|||++|.+++..+ ..+..++ +|++|+|++|.+++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4455555555555555555555555555555554444 4455555 55555555555555544444443 555
Q ss_pred CEEEccCCcCcccCCccc----cCC-CCCCEEEccCCcCCcCCCC-----CCC-CCcCCEEEcccCCCCCCCCcc-----
Q 003926 182 AVLSLRNNMFNGTLPDSF----SYL-ENLRVLALSNNHFYGEVPD-----FSG-LTYLQVLDLENNALGPQFPKV----- 245 (786)
Q Consensus 182 ~~L~Ls~N~l~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~~p~-----~~~-l~~L~~L~L~~N~l~~~~p~~----- 245 (786)
++|+|++|.+++..+..+ ..+ ++|+.|+|++|.+++..+. +.. .++|++|+|++|.++...+..
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 555555555554444322 222 5555555555555543331 222 245555666555554322211
Q ss_pred --c-cchhhhhccCCccCCcChhhhc----Cc-cccceeeccCccccCC----CchhhCC-CCCCcEEEeecCCCCcccC
Q 003926 246 --G-KKLVTMILSKNKFRSAIPAEVS----SY-YQLQRLDLSSNRFVGP----FPQALLS-LPSITYLNIADNKLTGKLF 312 (786)
Q Consensus 246 --~-~~L~~L~ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~l~~N~l~g~~~ 312 (786)
. .+|++|+|++|++++..+..+. .+ ++|+.|||++|+|.+. ++..+.. .++|+.|+|++|++++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 1 2555566666666555544333 22 3666666666666542 3444444 2366666666666655433
Q ss_pred ----ccCCCCCCCCEEeCcCCcCCccCC-------hhhhcCCCCcEEEcCCcccC
Q 003926 313 ----DDLSCNPELGFVDLSSNLLTGQLP-------NCLLAGSKNRVVLYARNCLA 356 (786)
Q Consensus 313 ----~~~~~~~~L~~l~ls~N~l~g~~p-------~~~~~~~~~~~~~~~~N~l~ 356 (786)
..+..+++|+.|+|++|.+.+..+ ..+.....+..+++++|.+.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 223455566666666666433222 12233344555566666553
No 337
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.2e-22 Score=231.91 Aligned_cols=219 Identities=26% Similarity=0.372 Sum_probs=150.0
Q ss_pred CCCCCCCCCCCCCCCCCCccE-EeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccC
Q 003926 49 LSSWNITTEFCNTEPTSSLTV-VCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKI 127 (786)
Q Consensus 49 l~~W~~~~~~C~w~~~~~~~v-~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~ 127 (786)
+.+|..+.++|.-....|.++ .|...+++.|+++++.+++ +|. .+ +++|++|+|++|.|+ .+|
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~---------~l--~~~L~~L~Ls~N~l~-~ip--- 96 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPD---------NL--PPQITVLEITQNALI-SLP--- 96 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCS---------CC--CTTCSEEECCSSCCS-CCC---
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCH---------hH--cCCCCEEECcCCCCc-ccc---
Confidence 456766677783211112357 6766688888888887765 443 22 267888888888887 455
Q ss_pred CCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCE
Q 003926 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207 (786)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 207 (786)
..+++|+.|+|++|.|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.
T Consensus 97 ~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~ 164 (571)
T 3cvr_A 97 ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEV 164 (571)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCE
T ss_pred cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCE
Confidence 457888888888888887 666 655 88888888888886 665 67888888888888886 565 5678888
Q ss_pred EEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCC
Q 003926 208 LALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPF 287 (786)
Q Consensus 208 L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 287 (786)
|+|++|+|++ +|.|. ++|+.|+|++|.|+ .+|....+| +.....|+.|+|++|+|+ .+
T Consensus 165 L~Ls~N~L~~-lp~l~--~~L~~L~Ls~N~L~-~lp~~~~~L-----------------~~~~~~L~~L~Ls~N~l~-~l 222 (571)
T 3cvr_A 165 LSVRNNQLTF-LPELP--ESLEALDVSTNLLE-SLPAVPVRN-----------------HHSEETEIFFRCRENRIT-HI 222 (571)
T ss_dssp EECCSSCCSC-CCCCC--TTCCEEECCSSCCS-SCCCCC-------------------------CCEEEECCSSCCC-CC
T ss_pred EECCCCCCCC-cchhh--CCCCEEECcCCCCC-chhhHHHhh-----------------hcccccceEEecCCCcce-ec
Confidence 8888888887 44454 77888888888776 233221112 011223477788888777 46
Q ss_pred chhhCCCCCCcEEEeecCCCCcccCccCCC
Q 003926 288 PQALLSLPSITYLNIADNKLTGKLFDDLSC 317 (786)
Q Consensus 288 p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~ 317 (786)
|..+..+++|+.|+|++|+|++.+|..+..
T Consensus 223 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 223 PENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp CGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred CHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 777777888888888888887777766544
No 338
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.87 E-value=1.6e-24 Score=244.16 Aligned_cols=278 Identities=21% Similarity=0.184 Sum_probs=181.2
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCcc-----CCCCCCCCEEeccCCCCCCC---
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGK-----ISRLSSLEILNMSSNFLNGA--- 146 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~-----~~~l~~L~~L~Ls~N~l~~~--- 146 (786)
+++.|++++|.+... ....++..+.++++|++|+|++|.+++..+.. +..+++|+.|+|++|.+++.
T Consensus 86 ~L~~L~L~~n~i~~~-----~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGA-----GCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp CCCEEECTTSCCBGG-----GHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred ceeEEEccCCCCCHH-----HHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 466666666543310 00123445667777777777777776543322 22356677777777777753
Q ss_pred -CCccccCCCCCcEEEcccccCCCCCCcccC-----CCCCCCEEEccCCcCccc----CCccccCCCCCCEEEccCCcCC
Q 003926 147 -IPQELSILTSLQTLILDENMLAGRVPDWLG-----SLPILAVLSLRNNMFNGT----LPDSFSYLENLRVLALSNNHFY 216 (786)
Q Consensus 147 -~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 216 (786)
++..+..+++|++|+|++|.++...+..+. .+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.++
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 355566677777777777777654333333 356777888887777653 4566667777888888888776
Q ss_pred cCC-----CC-CCCCCcCCEEEcccCCCCCC----CCcc---ccchhhhhccCCccCCcChhhhcC-----ccccceeec
Q 003926 217 GEV-----PD-FSGLTYLQVLDLENNALGPQ----FPKV---GKKLVTMILSKNKFRSAIPAEVSS-----YYQLQRLDL 278 (786)
Q Consensus 217 ~~~-----p~-~~~l~~L~~L~L~~N~l~~~----~p~~---~~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~L 278 (786)
+.. +. +..+++|++|+|++|.++.. ++.. .++|+.|++++|.+++..+..+.. .++|+.|+|
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 431 11 33567788888888877653 2332 356778888888776544444332 257888888
Q ss_pred cCccccCC----CchhhCCCCCCcEEEeecCCCCcccCccCC-----CCCCCCEEeCcCCcCCc----cCChhhhcCCCC
Q 003926 279 SSNRFVGP----FPQALLSLPSITYLNIADNKLTGKLFDDLS-----CNPELGFVDLSSNLLTG----QLPNCLLAGSKN 345 (786)
Q Consensus 279 s~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~-----~~~~L~~l~ls~N~l~g----~~p~~~~~~~~~ 345 (786)
++|.+++. ++..+..+++|+.|++++|++++..+..+. ..++|+.|++++|.+++ .+|..+..++++
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 88887765 566677778888888888887765444332 25678888888888875 677777777788
Q ss_pred cEEEcCCcccCC
Q 003926 346 RVVLYARNCLAA 357 (786)
Q Consensus 346 ~~~~~~~N~l~~ 357 (786)
+.+++++|.+++
T Consensus 401 ~~L~l~~N~i~~ 412 (461)
T 1z7x_W 401 RELDLSNNCLGD 412 (461)
T ss_dssp CEEECCSSSCCH
T ss_pred cEEECCCCCCCH
Confidence 888888877653
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=3.7e-24 Score=230.70 Aligned_cols=225 Identities=20% Similarity=0.175 Sum_probs=155.3
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCC--CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCC
Q 003926 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKL--PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG 145 (786)
Q Consensus 68 ~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l--~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (786)
++.|+...++.++++++.+. +..+..+ ++|+.|++++|.+.+..+. +..+++|+.|+|++|.+++
T Consensus 41 ~~~~~~~~~~~l~l~~~~~~------------~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 41 RLASDESLWQTLDLTGKNLH------------PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp HHHTCSTTSSEEECTTCBCC------------HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHhcCchhheeeccccccCC------------HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 35555445778888876543 2234455 7899999999999888776 5679999999999999887
Q ss_pred C-CCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCC-cCccc-CCccccCCCCCCEEEccCC-cCCcC-CC
Q 003926 146 A-IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN-MFNGT-LPDSFSYLENLRVLALSNN-HFYGE-VP 220 (786)
Q Consensus 146 ~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p 220 (786)
. +|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|+.|++++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 6 7888899999999999999998888888999999999999999 67763 6777888999999999999 88763 33
Q ss_pred C-CCCCC-cCCEEEcccCC--CC-CCCCcc---ccchhhhhccCCc-cCCcChhhhcCccccceeeccCcc-ccCCCchh
Q 003926 221 D-FSGLT-YLQVLDLENNA--LG-PQFPKV---GKKLVTMILSKNK-FRSAIPAEVSSYYQLQRLDLSSNR-FVGPFPQA 290 (786)
Q Consensus 221 ~-~~~l~-~L~~L~L~~N~--l~-~~~p~~---~~~L~~L~ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 290 (786)
. +..++ +|++|+|++|. ++ +.++.. .++|+.|++++|. +++..+..+..+++|+.|+|++|. +.......
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 267 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 267 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHH
Confidence 3 67788 89999998883 43 112211 2344555555554 444444444455555555555553 11111113
Q ss_pred hCCCCCCcEEEeecC
Q 003926 291 LLSLPSITYLNIADN 305 (786)
Q Consensus 291 ~~~l~~L~~L~l~~N 305 (786)
+.++++|+.|++++|
T Consensus 268 l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 268 LGEIPTLKTLQVFGI 282 (336)
T ss_dssp GGGCTTCCEEECTTS
T ss_pred HhcCCCCCEEeccCc
Confidence 444555555555544
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=2.2e-23 Score=227.11 Aligned_cols=252 Identities=18% Similarity=0.145 Sum_probs=198.0
Q ss_pred EEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCC----ccCCCCC-CCCEEeccCCCCCCCCCccccC
Q 003926 79 LHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLS----GKISRLS-SLEILNMSSNFLNGAIPQELSI 153 (786)
Q Consensus 79 l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~ 153 (786)
.+++.+.+++.+| ..+...++|++|+|++|.+++..+ ..|.+++ +|+.|+|++|.+++..+..+..
T Consensus 3 ~~ls~n~~~~~~~---------~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 73 (362)
T 3goz_A 3 YKLTLHPGSNPVE---------EFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ 73 (362)
T ss_dssp EECCCCTTCCHHH---------HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred cccccccchHHHH---------HHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHH
Confidence 3455555554433 344455669999999999998877 7888898 9999999999999888888877
Q ss_pred C-----CCCcEEEcccccCCCCCCccc----CCC-CCCCEEEccCCcCcccCCcccc----C-CCCCCEEEccCCcCCcC
Q 003926 154 L-----TSLQTLILDENMLAGRVPDWL----GSL-PILAVLSLRNNMFNGTLPDSFS----Y-LENLRVLALSNNHFYGE 218 (786)
Q Consensus 154 l-----~~L~~L~L~~N~l~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~Ls~N~l~~~ 218 (786)
+ ++|++|+|++|.+++..+..+ ..+ ++|+.|+|++|.+++..+..+. . .++|++|+|++|.+++.
T Consensus 74 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 74 ILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred HHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 5 999999999999998777654 444 8999999999999877665543 3 36999999999999854
Q ss_pred CCC-----CCCCC-cCCEEEcccCCCCCCCCcc-------c-cchhhhhccCCccCCc----ChhhhcC-ccccceeecc
Q 003926 219 VPD-----FSGLT-YLQVLDLENNALGPQFPKV-------G-KKLVTMILSKNKFRSA----IPAEVSS-YYQLQRLDLS 279 (786)
Q Consensus 219 ~p~-----~~~l~-~L~~L~L~~N~l~~~~p~~-------~-~~L~~L~ls~N~l~~~----~p~~~~~-l~~L~~L~Ls 279 (786)
... +..+. +|++|+|++|.+++..+.. . ++|+.|+|++|.+++. ++..+.. .++|+.|||+
T Consensus 154 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls 233 (362)
T 3goz_A 154 SSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLC 233 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECC
T ss_pred HHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECc
Confidence 332 34554 9999999999998766531 2 5899999999999874 4555555 4589999999
Q ss_pred CccccCCCc----hhhCCCCCCcEEEeecCCCCccc-------CccCCCCCCCCEEeCcCCcCCccCChhh
Q 003926 280 SNRFVGPFP----QALLSLPSITYLNIADNKLTGKL-------FDDLSCNPELGFVDLSSNLLTGQLPNCL 339 (786)
Q Consensus 280 ~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~g~~-------~~~~~~~~~L~~l~ls~N~l~g~~p~~~ 339 (786)
+|.|++..+ ..+..+++|+.|+|++|.+++.. +..+..++.|+.||+++|.+.+..+..+
T Consensus 234 ~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 234 LNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp SSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 999997655 34577899999999999965443 3467788899999999999987755443
No 341
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.4e-21 Score=223.11 Aligned_cols=187 Identities=25% Similarity=0.365 Sum_probs=127.6
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|+.|+|++|++++ +|..+ +++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 66777777777766 45444 256777777777766 445 345666666666666665 555 444 66666666
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhh
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV 267 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~ 267 (786)
+|.|++ +|. .+++|+.|+|++|.|++ +|. .+++|++|+|++|.| ++ +|. |
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L---------------------~~-lp~-l 178 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQL---------------------TF-LPE-L 178 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCC---------------------SC-CCC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCC---------------------CC-cch-h
Confidence 666665 444 45666666666666665 333 345555555555554 44 444 4
Q ss_pred cCccccceeeccCccccCCCchhhCCCCCC-------cEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhh
Q 003926 268 SSYYQLQRLDLSSNRFVGPFPQALLSLPSI-------TYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLL 340 (786)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~ 340 (786)
. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|++++.+|..+.
T Consensus 179 ~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 179 P--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp C--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred h--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 4 78899999999988 5666 554 67 999999999994 788788899999999999999999999876
Q ss_pred cC
Q 003926 341 AG 342 (786)
Q Consensus 341 ~~ 342 (786)
..
T Consensus 252 ~l 253 (571)
T 3cvr_A 252 QQ 253 (571)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=1.2e-23 Score=231.38 Aligned_cols=216 Identities=19% Similarity=0.205 Sum_probs=169.8
Q ss_pred CCCccCCCCCCCCEEeccCCCCCCCCC----ccccCCCCCcEEEcccc---cCCCCCCccc-------CCCCCCCEEEcc
Q 003926 122 PLSGKISRLSSLEILNMSSNFLNGAIP----QELSILTSLQTLILDEN---MLAGRVPDWL-------GSLPILAVLSLR 187 (786)
Q Consensus 122 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~Ls 187 (786)
.++..+..+++|+.|+|++|.+++..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 356677788999999999999987643 44778999999999985 5556667655 688889999999
Q ss_pred CCcCcc----cCCccccCCCCCCEEEccCCcCCcCCCC-----CCCC---------CcCCEEEcccCCCCCCCCccccch
Q 003926 188 NNMFNG----TLPDSFSYLENLRVLALSNNHFYGEVPD-----FSGL---------TYLQVLDLENNALGPQFPKVGKKL 249 (786)
Q Consensus 188 ~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-----~~~l---------~~L~~L~L~~N~l~~~~p~~~~~L 249 (786)
+|.+++ .+|..+.++++|+.|+|++|.+++..+. +..+ ++|++|+|++|.++.
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~--------- 173 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN--------- 173 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG---------
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc---------
Confidence 998887 4677788888899999998888643221 2223 677777776666531
Q ss_pred hhhhccCCccCCcCh---hhhcCccccceeeccCcccc--C---CCchhhCCCCCCcEEEeecCCCC----cccCccCCC
Q 003926 250 VTMILSKNKFRSAIP---AEVSSYYQLQRLDLSSNRFV--G---PFPQALLSLPSITYLNIADNKLT----GKLFDDLSC 317 (786)
Q Consensus 250 ~~L~ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----g~~~~~~~~ 317 (786)
+.+| ..+..+++|+.|+|++|+|. | .+|..+..+++|+.|+|++|.++ +.+|..+..
T Consensus 174 -----------~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 174 -----------GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp -----------GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred -----------HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 2333 45677889999999999998 3 45558899999999999999997 678888899
Q ss_pred CCCCCEEeCcCCcCCcc----CChhhhc--CCCCcEEEcCCcccCC
Q 003926 318 NPELGFVDLSSNLLTGQ----LPNCLLA--GSKNRVVLYARNCLAA 357 (786)
Q Consensus 318 ~~~L~~l~ls~N~l~g~----~p~~~~~--~~~~~~~~~~~N~l~~ 357 (786)
+++|+.|+|++|.+++. +|..+.. .++++.+++++|.+++
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 99999999999999976 6777644 7889999999998875
No 343
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=1.5e-22 Score=211.90 Aligned_cols=142 Identities=11% Similarity=0.108 Sum_probs=113.8
Q ss_pred HHHHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCC------------------ChHHHHHHHHHHhcC
Q 003926 469 LEELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCH------------------STRNFMHHIELISKL 530 (786)
Q Consensus 469 ~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~------------------~~~~f~~E~~~l~~l 530 (786)
+..+......|+..+.||+|+||.||+|+..+|+.||||.++..... ....|.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34455555667778999999999999999977999999999743211 235689999999999
Q ss_pred CCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCcccc
Q 003926 531 RHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSN 610 (786)
Q Consensus 531 ~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHr 610 (786)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||.|||+. +|+||
T Consensus 162 ~--~-~~v~~~~~~--------~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHr 217 (282)
T 1zar_A 162 Q--G-LAVPKVYAW--------EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHG 217 (282)
T ss_dssp T--T-SSSCCEEEE--------ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred c--C-CCcCeEEec--------cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeC
Confidence 9 5 666665432 34699999999999998 432 12346899999999999997 99999
Q ss_pred CCCCCceeecCCCcccccCCCcccc
Q 003926 611 NLKITDILLDQNLVAKISSYNLPLL 635 (786)
Q Consensus 611 dlk~~NILld~~~~~kl~DfGl~~~ 635 (786)
||||+|||++ ++.+||+|||+++.
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeE
Confidence 9999999999 99999999999753
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=8.5e-21 Score=201.63 Aligned_cols=208 Identities=23% Similarity=0.301 Sum_probs=173.4
Q ss_pred EEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcC
Q 003926 112 LRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMF 191 (786)
Q Consensus 112 L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 191 (786)
+.+..+.+...++ +..+++|+.|++++|.++. +| .+..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+
T Consensus 24 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcC
Confidence 3455556555433 4568899999999999985 45 68899999999999999986544 99999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCcc
Q 003926 192 NGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYY 271 (786)
Q Consensus 192 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~ 271 (786)
++. +.+..+++|+.|+|++|.+++. +.+..+++|+.|++++|.+++ ++. +..++
T Consensus 98 ~~~--~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~----------------------~~~-l~~l~ 151 (308)
T 1h6u_A 98 KNV--SAIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITN----------------------ISP-LAGLT 151 (308)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCC----------------------CGG-GGGCT
T ss_pred CCc--hhhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc----------------------Ccc-ccCCC
Confidence 863 3688999999999999999874 558888999999988887642 222 77889
Q ss_pred ccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcC
Q 003926 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYA 351 (786)
Q Consensus 272 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~ 351 (786)
+|+.|+|++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+.+++.++++
T Consensus 152 ~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~ 225 (308)
T 1h6u_A 152 NLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEcc
Confidence 99999999999997544 9999999999999999997655 7889999999999999997654 7788899999999
Q ss_pred CcccCC
Q 003926 352 RNCLAA 357 (786)
Q Consensus 352 ~N~l~~ 357 (786)
+|.+++
T Consensus 226 ~N~i~~ 231 (308)
T 1h6u_A 226 NQTITN 231 (308)
T ss_dssp EEEEEC
T ss_pred CCeeec
Confidence 999876
No 345
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.85 E-value=7.4e-24 Score=238.74 Aligned_cols=275 Identities=23% Similarity=0.203 Sum_probs=173.4
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCcc----CCCccCCCCCCCCEEeccCCCCCCCCCcc
Q 003926 75 SITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWG----PLSGKISRLSSLEILNMSSNFLNGAIPQE 150 (786)
Q Consensus 75 ~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 150 (786)
+++.|+++++.++.. .+...+..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..
T Consensus 4 ~l~~L~Ls~~~l~~~--------~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~ 75 (461)
T 1z7x_W 4 DIQSLDIQCEELSDA--------RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC 75 (461)
T ss_dssp EEEEEEEESCCCCHH--------HHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHH
T ss_pred cceehhhhhcccCch--------hHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHH
Confidence 467788877654321 111224567777778888777764 34566677777888888877776543333
Q ss_pred c-cCCC----CCcEEEcccccCCC----CCCcccCCCCCCCEEEccCCcCcccCCccc-----cCCCCCCEEEccCCcCC
Q 003926 151 L-SILT----SLQTLILDENMLAG----RVPDWLGSLPILAVLSLRNNMFNGTLPDSF-----SYLENLRVLALSNNHFY 216 (786)
Q Consensus 151 ~-~~l~----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~ 216 (786)
+ ..++ +|++|+|++|+++. .+|..+..+++|++|+|++|.++...+..+ ...++|+.|+|++|.++
T Consensus 76 l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 155 (461)
T 1z7x_W 76 VLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS 155 (461)
T ss_dssp HHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB
T ss_pred HHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCC
Confidence 3 2344 57788888777763 456777777778888888777765433322 22456777777777776
Q ss_pred cCC----C-CCCCCCcCCEEEcccCCCCCCCCcc--------ccchhhhhccCCccCCc----ChhhhcCccccceeecc
Q 003926 217 GEV----P-DFSGLTYLQVLDLENNALGPQFPKV--------GKKLVTMILSKNKFRSA----IPAEVSSYYQLQRLDLS 279 (786)
Q Consensus 217 ~~~----p-~~~~l~~L~~L~L~~N~l~~~~p~~--------~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~Ls 279 (786)
+.. + .+..+++|++|+|++|.++...+.. .++|+.|++++|.+++. ++..+..+++|+.|+|+
T Consensus 156 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 235 (461)
T 1z7x_W 156 AASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 235 (461)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECC
T ss_pred HHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEecc
Confidence 532 2 2455677777777777765432211 23677777777777663 46666677777777777
Q ss_pred CccccCCC-----chhhCCCCCCcEEEeecCCCCcc----cCccCCCCCCCCEEeCcCCcCCccCChhhhc-----CCCC
Q 003926 280 SNRFVGPF-----PQALLSLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDLSSNLLTGQLPNCLLA-----GSKN 345 (786)
Q Consensus 280 ~N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~g~----~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~-----~~~~ 345 (786)
+|.+.+.. +..+..+++|+.|++++|++++. ++..+..+++|+.|++++|.+++..+..+.. ..++
T Consensus 236 ~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 315 (461)
T 1z7x_W 236 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 315 (461)
T ss_dssp SSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred CCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccc
Confidence 77776432 22333567777777777777764 4555566677777777777776543333322 1466
Q ss_pred cEEEcCCcccCC
Q 003926 346 RVVLYARNCLAA 357 (786)
Q Consensus 346 ~~~~~~~N~l~~ 357 (786)
+.+++++|.+++
T Consensus 316 ~~L~L~~n~l~~ 327 (461)
T 1z7x_W 316 ESLWVKSCSFTA 327 (461)
T ss_dssp CEEECTTSCCBG
T ss_pred eeeEcCCCCCch
Confidence 777777776653
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=7.9e-21 Score=205.81 Aligned_cols=219 Identities=21% Similarity=0.119 Sum_probs=156.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCC-ccccCCCCCcE-EEcccccCCCCCCcccCCCCCCCEE
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP-QELSILTSLQT-LILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
++|++|+|++|+++...++.|.+|++|++|+|++|++.+.+| ..|.++++|.. +.++.|+++...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999998877889999999999999999977665 46788988775 6777899998888999999999999
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccC-CcCCcCCC-CCCCCC-cCCEEEcccCCCCCCCCcc--ccchhhhhccC-Cc
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSN-NHFYGEVP-DFSGLT-YLQVLDLENNALGPQFPKV--GKKLVTMILSK-NK 258 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p-~~~~l~-~L~~L~L~~N~l~~~~p~~--~~~L~~L~ls~-N~ 258 (786)
++++|.+.+..+..+....++..|++.+ |++....+ .|..+. .++.|+|++|+|+...+.. ..+|+.+++++ |.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCc
Confidence 9999999987777777778888999876 45654443 366654 5888899988887544433 24566777764 44
Q ss_pred cCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCC
Q 003926 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN 329 (786)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N 329 (786)
++...+..|..+++|+.|||++|+|+...+..| .+|+.|.+.++.--..+| .+..+++|+.++++++
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 443333456777777777777777775433333 344444443333223444 3556666666666544
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=2.1e-20 Score=186.69 Aligned_cols=177 Identities=25% Similarity=0.237 Sum_probs=117.0
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCc
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 190 (786)
.++.++++++.. |..+ .++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.
T Consensus 11 ~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 455555555443 3222 4578888888888887777777888888888888888886666677888888888888888
Q ss_pred CcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcC
Q 003926 191 FNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSS 269 (786)
Q Consensus 191 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~ 269 (786)
+++..+..|.++++|++|+|++|++++..+. |..+++|++|+|++|.+++ ..+..+..
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~---------------------~~~~~~~~ 146 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS---------------------VPDGVFDR 146 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC---------------------CCTTTTTT
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce---------------------eCHHHhcc
Confidence 8866666677788888888888877766554 5666777777766665542 22333455
Q ss_pred ccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCC
Q 003926 270 YYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCN 318 (786)
Q Consensus 270 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~ 318 (786)
+++|+.|+|++|.+.+ .+++|+.|+++.|+++|.+|..++.+
T Consensus 147 l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 147 LTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred CCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 5566666666665543 23455555555555555555555443
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=1.3e-22 Score=218.67 Aligned_cols=244 Identities=16% Similarity=0.136 Sum_probs=199.6
Q ss_pred CCCEEEccCCCCccCCCccCCCC--CCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCC-CCcccCCCCCCCEE
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRL--SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGR-VPDWLGSLPILAVL 184 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 184 (786)
.++.|++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4789999999887 4567777 8999999999999988776 56899999999999999876 88899999999999
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCC-cCCcC-CCC-CCCCCcCCEEEcccC-CCCCC-CCc---ccc-chhhhhcc
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNN-HFYGE-VPD-FSGLTYLQVLDLENN-ALGPQ-FPK---VGK-KLVTMILS 255 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~-~~~l~~L~~L~L~~N-~l~~~-~p~---~~~-~L~~L~ls 255 (786)
+|++|.+++..|..++.+++|+.|+|++| .+++. ++. +.++++|++|+|++| .+++. ++. ..+ +|+.|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999888889999999999999999 67752 444 778999999999999 88753 333 246 89999999
Q ss_pred CC--ccC-CcChhhhcCccccceeeccCcc-ccCCCchhhCCCCCCcEEEeecCC-CCcccCccCCCCCCCCEEeCcCCc
Q 003926 256 KN--KFR-SAIPAEVSSYYQLQRLDLSSNR-FVGPFPQALLSLPSITYLNIADNK-LTGKLFDDLSCNPELGFVDLSSNL 330 (786)
Q Consensus 256 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~-l~g~~~~~~~~~~~L~~l~ls~N~ 330 (786)
+| .++ +.+|..+.++++|+.|+|++|. +++..+..+.++++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 566 5678888899999999999999 787888899999999999999995 44333346788999999999999
Q ss_pred CCccCChhhhcCCCCcEEEcCCcccCCC
Q 003926 331 LTGQLPNCLLAGSKNRVVLYARNCLAAG 358 (786)
Q Consensus 331 l~g~~p~~~~~~~~~~~~~~~~N~l~~~ 358 (786)
++...-..+. ..+..+.+..|.+++.
T Consensus 283 i~~~~~~~l~--~~l~~L~l~~n~l~~~ 308 (336)
T 2ast_B 283 VPDGTLQLLK--EALPHLQINCSHFTTI 308 (336)
T ss_dssp SCTTCHHHHH--HHSTTSEESCCCSCCT
T ss_pred cCHHHHHHHH--hhCcceEEecccCccc
Confidence 4432111221 1234455788888873
No 349
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=2.8e-21 Score=228.65 Aligned_cols=266 Identities=18% Similarity=0.161 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHhcCCCC--CCCCCCCCC-CCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccC
Q 003926 28 LQSSQAQTLLRIQGLLNNP--AVLSSWNIT-TEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLV 104 (786)
Q Consensus 28 ~~~~~~~~ll~~k~~~~~~--~~l~~W~~~-~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~ 104 (786)
..+.++++|+++...+... ..-..|... +..+.|. ++.+...+++.|.|.++.+... +. .+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~l~L~~n~~~~~-~~---------~~l 193 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTAT-----NSAVSTPLTPKIELFANGKDEA-NQ---------ALL 193 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCC-----CceecCCccceEEeeCCCCCcc-hh---------hHh
Confidence 4566788999998765321 122346433 3455665 4777778899999987765432 11 111
Q ss_pred CCCC-----CCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCC
Q 003926 105 KLPD-----LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLP 179 (786)
Q Consensus 105 ~l~~-----L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 179 (786)
...+ +..+++..|.+. .+++.|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|+
T Consensus 194 ~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 194 QHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 1111 223333344443 45788999999999999999998 67888889999999999999999 8899999999
Q ss_pred CCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCcccc----chhhhhcc
Q 003926 180 ILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGK----KLVTMILS 255 (786)
Q Consensus 180 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~----~L~~L~ls 255 (786)
+|++|+|++|.|+ .+|..|++|++|++|+|++|.|+..+..|+.+++|+.|+|++|.|++.+|.... .+..++|+
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~ 349 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLR 349 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhc
Confidence 9999999999999 789999999999999999999985555699999999999999999887776542 22346677
Q ss_pred CCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 256 KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 256 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
+|.+++.+|.. |+.|++++|... -..+ +.|.+..+..+..+..+....+++|.+.+.
T Consensus 350 ~N~l~~~~p~~------l~~l~l~~n~~~---~~~~-------------~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 350 DNRPEIPLPHE------RRFIEINTDGEP---QREY-------------DSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp HCCCCCCCCCC---------------------------------------------------------------CCCGG
T ss_pred cCcccCcCccc------cceeEeeccccc---cccc-------------CCccccccchhhcccccceeeeeccccccc
Confidence 77777776643 445556655110 0111 122333333344455556667777776643
No 350
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.4e-19 Score=183.53 Aligned_cols=166 Identities=23% Similarity=0.202 Sum_probs=142.7
Q ss_pred CCCCCCCCCCCCCCCCCccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCCC
Q 003926 50 SSWNITTEFCNTEPTSSLTVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKISR 129 (786)
Q Consensus 50 ~~W~~~~~~C~w~~~~~~~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~~ 129 (786)
..|..+...|+|. +|.|...+++ .+| ..+ .++|++|+|++|.+++..|..|.+
T Consensus 10 ~~~~~~~~~Cs~~-----~v~c~~~~l~-----------~ip---------~~~--~~~L~~L~Ls~n~i~~~~~~~~~~ 62 (229)
T 3e6j_A 10 SAACPSQCSCSGT-----TVDCRSKRHA-----------SVP---------AGI--PTNAQILYLHDNQITKLEPGVFDS 62 (229)
T ss_dssp -CCCCTTCEEETT-----EEECTTSCCS-----------SCC---------SCC--CTTCSEEECCSSCCCCCCTTTTTT
T ss_pred hccCCCCCEEeCC-----EeEccCCCcC-----------ccC---------CCC--CCCCCEEEcCCCccCccCHHHhhC
Confidence 4566678899998 5899654432 223 222 278999999999999999999999
Q ss_pred CCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEE
Q 003926 130 LSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLA 209 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 209 (786)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 999999999999998777788899999999999999999888888999999999999999999 7899999999999999
Q ss_pred ccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCC
Q 003926 210 LSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFP 243 (786)
Q Consensus 210 Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p 243 (786)
|++|++++..+. |..+++|+.|+|++|.+....+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999987765 8889999999999998865443
No 351
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=1.8e-19 Score=195.17 Aligned_cols=235 Identities=17% Similarity=0.098 Sum_probs=176.6
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCC-cccCCCCCCCE-EEccC
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVP-DWLGSLPILAV-LSLRN 188 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls~ 188 (786)
+++.++++++. +|..+ .++|+.|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|.. +.+++
T Consensus 13 ~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCCS-CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCCc-cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 45566667764 45444 3689999999999997777789999999999999999987776 57899999875 67778
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccC-CCCCCCCcc----ccchhhhhccCCccCCc
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENN-ALGPQFPKV----GKKLVTMILSKNKFRSA 262 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N-~l~~~~p~~----~~~L~~L~ls~N~l~~~ 262 (786)
|+++...|..|.++++|++|++++|.+++..+. +....++..|++.++ ++....+.. ...++.|+|++|+|+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~- 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE- 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-
Confidence 999998899999999999999999999876653 566778889999764 554433322 2467889999999975
Q ss_pred ChhhhcCccccceeeccC-ccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhc
Q 003926 263 IPAEVSSYYQLQRLDLSS-NRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLA 341 (786)
Q Consensus 263 ~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 341 (786)
+|.......+|+.|++++ |.++...+..|..+++|+.|+|++|+|+...+..+ .+|+.|.+.++.--..+|. +..
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~-l~~ 244 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPT-LEK 244 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCC-TTT
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCC-chh
Confidence 444444567899999985 56665444678999999999999999987655544 4555565555444446674 555
Q ss_pred CCCCcEEEcCCc
Q 003926 342 GSKNRVVLYARN 353 (786)
Q Consensus 342 ~~~~~~~~~~~N 353 (786)
..+++.+.+..+
T Consensus 245 l~~L~~l~l~~~ 256 (350)
T 4ay9_X 245 LVALMEASLTYP 256 (350)
T ss_dssp CCSCCEEECSCH
T ss_pred CcChhhCcCCCC
Confidence 667777776554
No 352
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.3e-19 Score=188.89 Aligned_cols=171 Identities=27% Similarity=0.334 Sum_probs=90.0
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.+++|+.|++++|.+... + .+..+++|+.|+|++|++++..+ +.++++|++|+|++|.+++ +| .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 455555666665555443 2 25555556666666665554333 5555555555555555543 22 25555555555
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
+|++|.+++. +.+..+++|+.|++++|.+++. +.+..+++|+.|+|++|.++ +..|
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~---------------------~~~~ 173 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQIS---------------------DIVP 173 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC---------------------CCGG
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccc---------------------cchh
Confidence 5555555542 2455555555555555555443 44444555555554444432 2222
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
+..+++|+.|+|++|+|++ +| .+..+++|+.|++++|+++.
T Consensus 174 --l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred --hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 4555566666666666654 23 25566666666666665554
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.5e-19 Score=208.64 Aligned_cols=172 Identities=28% Similarity=0.336 Sum_probs=96.9
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.|++|+.|+|++|.+... + .|..|++|+.|+|++|.|++..| +..+++|+.|+|++|.+++ +| .+..+++|+.|
T Consensus 41 ~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 455555556655555443 2 35555566666666666554433 5555566666666665553 22 45555555555
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
+|++|.+.+. +.+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|.+ ++..|
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l---------------------~~~~~ 170 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQI---------------------SDIVP 170 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCC---------------------CCCGG
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcC---------------------CCchh
Confidence 5555555542 2355555555555555555543 4455555555555555544 33333
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 310 (786)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 55666677777777766653 2466667777777777766654
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=2.1e-19 Score=189.20 Aligned_cols=189 Identities=23% Similarity=0.285 Sum_probs=154.7
Q ss_pred CCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 109 L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
+..+++..+.+.+..+ +..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..| +..+++|+.|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3445566666665433 45788999999999999855 4 48889999999999999986544 89999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhc
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~ 268 (786)
|.+++ +| .+..+++|+.|+|++|++++ ++.+..+++|+.|++++|.+++ + ..+.
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~~~l~~l~~L~~L~l~~n~l~~----------------------~-~~l~ 153 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITD----------------------I-TVLS 153 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCC-CGGGGGCTTCCEEECCSSCCCC----------------------C-GGGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCC-ChhhcCCCCCCEEEccCCcCCc----------------------c-hhhc
Confidence 99986 33 48899999999999999886 4678888888888888887642 2 3577
Q ss_pred CccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCc
Q 003926 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTG 333 (786)
Q Consensus 269 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g 333 (786)
.+++|+.|+|++|++++..| +..+++|+.|++++|++++. + .+..+++|+.|++++|+++.
T Consensus 154 ~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 154 RLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred cCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 88999999999999997655 89999999999999999874 3 48889999999999999875
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=4.2e-19 Score=193.05 Aligned_cols=156 Identities=26% Similarity=0.235 Sum_probs=101.4
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCCccCC-CCCCCCEEeccCCCCCCC
Q 003926 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLSGKIS-RLSSLEILNMSSNFLNGA 146 (786)
Q Consensus 68 ~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~~~~~-~l~~L~~L~Ls~N~l~~~ 146 (786)
.+.|.. ..++++++.+.. +|. .+. +.|+.|+|++|++++..+..|. ++++|+.|+|++|+|++.
T Consensus 15 ~C~C~~---~~l~c~~~~l~~-iP~---------~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i 79 (361)
T 2xot_A 15 NCLCAS---NILSCSKQQLPN-VPQ---------SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI 79 (361)
T ss_dssp TCEEET---TEEECCSSCCSS-CCS---------SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE
T ss_pred CCEECC---CEEEeCCCCcCc-cCc---------cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc
Confidence 367753 246776665443 232 111 2467777777777777776676 777777777777777776
Q ss_pred CCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-C---
Q 003926 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-F--- 222 (786)
Q Consensus 147 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~--- 222 (786)
.|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..+. |
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~ 159 (361)
T 2xot_A 80 SSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDG 159 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC--
T ss_pred ChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCc
Confidence 667777777777777777777766666677777777777777777766666777777777777777777654433 2
Q ss_pred CCCCcCCEEEcccCCC
Q 003926 223 SGLTYLQVLDLENNAL 238 (786)
Q Consensus 223 ~~l~~L~~L~L~~N~l 238 (786)
..+++|+.|+|++|+|
T Consensus 160 ~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 160 NKLPKLMLLDLSSNKL 175 (361)
T ss_dssp --CTTCCEEECCSSCC
T ss_pred ccCCcCCEEECCCCCC
Confidence 3455555555544444
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.2e-19 Score=209.51 Aligned_cols=193 Identities=22% Similarity=0.286 Sum_probs=162.3
Q ss_pred CCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEE
Q 003926 106 LPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLS 185 (786)
Q Consensus 106 l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 185 (786)
+..+..++|..+.+...++ +..|++|+.|+|++|.+... | .+..|++|+.|+|++|++++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445556777777776554 56788999999999999854 4 58899999999999999987655 88999999999
Q ss_pred ccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChh
Q 003926 186 LRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPA 265 (786)
Q Consensus 186 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~ 265 (786)
|++|.+.+ +| .+..+++|+.|+|++|.+++ ++.+..+++|+.|+|++|.+++ . .
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~---------------------l--~ 147 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITD---------------------I--T 147 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCCC---------------------C--G
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccCC---------------------c--h
Confidence 99999986 34 68899999999999999986 4678888899999888887742 2 4
Q ss_pred hhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 266 EVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
.+..+++|+.|+|++|+|.+..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++.
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 57789999999999999998777 99999999999999999985 4688999999999999999864
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.8e-18 Score=174.19 Aligned_cols=133 Identities=26% Similarity=0.296 Sum_probs=125.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|+.|+|++|++.+..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+++...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 58999999999999998889999999999999999999999999999999999999999999777777899999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALG 239 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~ 239 (786)
++|.+++..|..|.++++|+.|+|++|++++..+. |..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 99999999999999999999999999999988875 888999999999999874
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=2.1e-18 Score=173.56 Aligned_cols=160 Identities=23% Similarity=0.262 Sum_probs=137.3
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCCCccCCC-ccCCCCCCCCEEeccCCCCCCC
Q 003926 68 TVVCYEESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLGLWGPLS-GKISRLSSLEILNMSSNFLNGA 146 (786)
Q Consensus 68 ~v~c~~~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~~-~~~~~l~~L~~L~Ls~N~l~~~ 146 (786)
+++|.. +.++++++.++. +|. .+ .+.+++|+|++|++++..+ ..|.++++|+.|+|++|.|++.
T Consensus 8 ~C~C~~---~~l~~s~n~l~~-iP~---------~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i 72 (220)
T 2v70_A 8 KCRCEG---TTVDCSNQKLNK-IPE---------HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 72 (220)
T ss_dssp TCEEET---TEEECCSSCCSS-CCS---------CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE
T ss_pred CCEECC---CEeEeCCCCccc-Ccc---------CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE
Confidence 356643 257777776553 343 22 2346899999999999865 5689999999999999999998
Q ss_pred CCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCC
Q 003926 147 IPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGL 225 (786)
Q Consensus 147 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l 225 (786)
.+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..|. |..+
T Consensus 73 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 152 (220)
T 2v70_A 73 EEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTL 152 (220)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTC
T ss_pred CHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCC
Confidence 888999999999999999999988888999999999999999999999999999999999999999999998774 8899
Q ss_pred CcCCEEEcccCCCCCCC
Q 003926 226 TYLQVLDLENNALGPQF 242 (786)
Q Consensus 226 ~~L~~L~L~~N~l~~~~ 242 (786)
++|+.|+|++|.+....
T Consensus 153 ~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 153 HSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTCCEEECCSCCEECSG
T ss_pred CCCCEEEecCcCCcCCC
Confidence 99999999999886543
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.7e-18 Score=174.26 Aligned_cols=61 Identities=25% Similarity=0.353 Sum_probs=27.8
Q ss_pred CCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCC
Q 003926 156 SLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY 216 (786)
Q Consensus 156 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 216 (786)
+|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|.++
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 93 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC
Confidence 3444444444444333334444444444444444444444444444444444444444444
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=5.9e-19 Score=191.89 Aligned_cols=175 Identities=27% Similarity=0.258 Sum_probs=117.5
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCcccc-CCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELS-ILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
+.++++++++.. +|..+. ..++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 577888887765 344443 3577788888888777777676 778888888888888776667777777888888888
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhh
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEV 267 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~ 267 (786)
|+|++..+..|.++++|+.|+|++|++++..|. |.++++|+.|+|++|.|+... +..|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~---------------------~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP---------------------VELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC---------------------GGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC---------------------HHHh
Confidence 877776666777777777777777777766553 667777777777666654211 1112
Q ss_pred ---cCccccceeeccCccccCCCchhhCCCCCC--cEEEeecCCCC
Q 003926 268 ---SSYYQLQRLDLSSNRFVGPFPQALLSLPSI--TYLNIADNKLT 308 (786)
Q Consensus 268 ---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~l~~N~l~ 308 (786)
..+++|+.|||++|+|++..+..+..++.+ +.|+|++|.+.
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 446667777777777766555556655542 55666665554
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=2.1e-18 Score=173.58 Aligned_cols=153 Identities=17% Similarity=0.154 Sum_probs=78.8
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCC-ccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIP-QELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
+.+++++|.++. +|..+. ..++.|+|++|+|++..| ..|..+++|+.|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 355666665544 333332 234555555555555433 2345555555555555555544444555555555555555
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhc
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVS 268 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~ 268 (786)
|.+++..|..|.++++|++|+|++|++++.. |..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--------------------------------------------~~~~~ 126 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVG--------------------------------------------NDSFI 126 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBC--------------------------------------------TTSST
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeEC--------------------------------------------HhHcC
Confidence 5555444444555555555555555544433 33344
Q ss_pred CccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCc
Q 003926 269 SYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTG 309 (786)
Q Consensus 269 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 309 (786)
.+++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++
T Consensus 127 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 127 GLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 44555555555555555555555555555555555555554
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=3.9e-18 Score=172.87 Aligned_cols=85 Identities=26% Similarity=0.305 Sum_probs=35.8
Q ss_pred CCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEc
Q 003926 131 SSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLAL 210 (786)
Q Consensus 131 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 210 (786)
++|++|+|++|.|++..|..|.++++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 44444444444444444444444444444444444443333333344444444444444444333333333333333333
Q ss_pred cCCcC
Q 003926 211 SNNHF 215 (786)
Q Consensus 211 s~N~l 215 (786)
++|++
T Consensus 120 s~N~l 124 (229)
T 3e6j_A 120 CCNKL 124 (229)
T ss_dssp CSSCC
T ss_pred cCCcc
Confidence 33333
No 363
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.1e-19 Score=215.13 Aligned_cols=215 Identities=19% Similarity=0.178 Sum_probs=111.1
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCC---------CCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNG---------AIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~---------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
+.++.|+|..|.+... +.. .|+.++|+.|.|.+ ..|..|..+++|+.|+|++|.+. .+|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~-----~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQA-----LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCcc-hhh-----HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 5677888888888764 322 23344444444332 45778888999999999999987 67777778
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCC
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKN 257 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N 257 (786)
+++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+..+..|++|++|++|+|++|.|+
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~------------------ 306 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT------------------ 306 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC------------------
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC------------------
Confidence 999999999999998 7888889999999999999999844445888888888888888763
Q ss_pred ccCCcChhhhcCccccceeeccCccccCCCchhhCCCCC-CcEEEeecCCCCcccCccCCCCCCCCEEeCcCC-------
Q 003926 258 KFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS-ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSN------- 329 (786)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N------- 329 (786)
.+|..|+++++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|..+ ..|++++|
T Consensus 307 ----~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l------~~l~l~~n~~~~~~~ 376 (727)
T 4b8c_D 307 ----TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER------RFIEINTDGEPQREY 376 (727)
T ss_dssp ----CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------
T ss_pred ----ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc------ceeEeeccccccccc
Confidence 45666777777888888888888777777655432 2236778888887777543 45556655
Q ss_pred -cCCccCChhhhcCCCCcEEEcCCcccCC
Q 003926 330 -LLTGQLPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 330 -~l~g~~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
.+.+.++..+..........++.|.+.+
T Consensus 377 ~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 377 DSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -------------------------CCCG
T ss_pred CCccccccchhhcccccceeeeecccccc
Confidence 3333333334444455566677777653
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1.6e-21 Score=223.77 Aligned_cols=176 Identities=21% Similarity=0.232 Sum_probs=101.1
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCCCCcEEEccccc-------------CCCCCCcccCCCCCCCEEE-ccCC-----
Q 003926 129 RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM-------------LAGRVPDWLGSLPILAVLS-LRNN----- 189 (786)
Q Consensus 129 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N----- 189 (786)
.+++|+.|+|++|+++ .+|.++++|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L 425 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDL 425 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchh
Confidence 3444555555555543 345555555555555544443 3444455555555555554 3333
Q ss_pred --------cCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCC
Q 003926 190 --------MFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRS 261 (786)
Q Consensus 190 --------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~ 261 (786)
.++...+ ..|+.|+|++|.|++ +|.|+.+++|+.|+|++|.|+
T Consensus 426 ~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l~---------------------- 476 (567)
T 1dce_A 426 RSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRLR---------------------- 476 (567)
T ss_dssp HHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCCC----------------------
T ss_pred hhhhhhcccccccCc------cCceEEEecCCCCCC-CcCccccccCcEeecCccccc----------------------
Confidence 3332111 135666666666665 344666666666666555543
Q ss_pred cChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCccc-CccCCCCCCCCEEeCcCCcCCccCC
Q 003926 262 AIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKL-FDDLSCNPELGFVDLSSNLLTGQLP 336 (786)
Q Consensus 262 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~-~~~~~~~~~L~~l~ls~N~l~g~~p 336 (786)
.+|..|+++++|+.|+|++|+|++ +| .++++++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|
T Consensus 477 ~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 477 ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 455666667777777777777765 45 6677777777777777777665 6667777777777777777766544
No 365
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2e-18 Score=170.73 Aligned_cols=128 Identities=16% Similarity=0.217 Sum_probs=61.6
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
.+++|+.|++++|.+. .+| .+..+++|+.|++++|.++ .+..+..+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 4455555555555554 223 3555555555555555443 12344555555555555555554444455555555555
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccC
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENN 236 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N 236 (786)
+|++|.+++..|..|+.+++|+.|+|++|.+.+.+|.+..+++|+.|++++|
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD 169 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTB
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCC
Confidence 5555555544444455555555555555542222333334444444444333
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=8.8e-19 Score=181.50 Aligned_cols=171 Identities=23% Similarity=0.307 Sum_probs=104.1
Q ss_pred CCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEE
Q 003926 105 KLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVL 184 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 184 (786)
++.++..++++.|.+.+.. .+..+++|+.|++++|.++. +| .+..+++|+.|+|++|++++..| +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3455566667777766543 45667777777777777763 34 56667777777777777765433 6677777777
Q ss_pred EccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 185 SLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 185 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
+|++|++++ +|.. .. ++|+.|+|++|++++ ++.+..+++|+.|+|++|+++ + +|
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~---------------------~-~~ 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNKLK---------------------S-IV 144 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSCCC---------------------B-CG
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCC-ChhhcCcccccEEECCCCcCC---------------------C-Ch
Confidence 777777665 3322 22 666666666666665 344666666666666655553 1 12
Q ss_pred hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGK 310 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 310 (786)
.+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 345556666666666666654 4556666666666666666544
No 367
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=9.7e-19 Score=180.63 Aligned_cols=136 Identities=10% Similarity=0.091 Sum_probs=104.4
Q ss_pred CCccCccCCCCCceeEEEEe-cCCcE--EEEEEecccCCCC------------------------hHHHHHHHHHHhcCC
Q 003926 479 FDTSAFMGEGSQGQMYRGRL-KNGTF--VAIRCLKMKKCHS------------------------TRNFMHHIELISKLR 531 (786)
Q Consensus 479 f~~~~~iG~G~fg~Vy~~~~-~~g~~--vAvK~l~~~~~~~------------------------~~~f~~E~~~l~~l~ 531 (786)
|+..+.||+|+||.||+|.. .+|+. ||||+++...... ...+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999997 68989 9999875432110 125889999999999
Q ss_pred CCCc--ceeeeeeeeccccCCCCceEEEEEecCCC-C----ChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhh-cCC
Q 003926 532 HRHL--VSALGHCFECYFDDSSVSRIFLIFEYVPN-G----TLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLH-TGI 603 (786)
Q Consensus 532 H~NI--v~l~g~~~~~~~~~~~~~~~~LV~Ey~~~-G----sL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH-~~~ 603 (786)
|+++ ...+++ +..+|||||+.+ | +|.++... .++.....++.|++.||.||| +.
T Consensus 129 ~~~i~~p~~~~~-----------~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~- 190 (258)
T 1zth_A 129 EAGVSVPQPYTY-----------MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA- 190 (258)
T ss_dssp HTTCCCCCEEEE-----------ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS-
T ss_pred hCCCCCCeEEEc-----------CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC-
Confidence 8865 222221 135899999942 4 66666432 223456788999999999999 76
Q ss_pred CCCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 604 VPGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 604 ~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
+|+||||||+|||++. .++|+|||++...
T Consensus 191 --givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 191 --ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp --CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred --CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999999998 8999999998543
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.7e-18 Score=179.33 Aligned_cols=171 Identities=18% Similarity=0.247 Sum_probs=138.4
Q ss_pred CCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEE
Q 003926 129 RLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVL 208 (786)
Q Consensus 129 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 208 (786)
++.++..++++.|.+++.. .+..+++|+.|++++|.++ .+| .+..+++|+.|+|++|.+++..| |.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 5667788888888888543 5778889999999999887 455 68888888888888888886444 8888888888
Q ss_pred EccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCc
Q 003926 209 ALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP 288 (786)
Q Consensus 209 ~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 288 (786)
+|++|++++ +|.+.. ++|+.|+|++|+++ + ++ .+..+++|+.|+|++|+|++. |
T Consensus 91 ~L~~N~l~~-l~~~~~-~~L~~L~L~~N~l~---------------------~-~~-~l~~l~~L~~L~Ls~N~i~~~-~ 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS-ACLSRLFLDNNELR---------------------D-TD-SLIHLKNLEILSIRNNKLKSI-V 144 (263)
T ss_dssp ECCSSCCSC-CTTCCC-SSCCEEECCSSCCS---------------------B-SG-GGTTCTTCCEEECTTSCCCBC-G
T ss_pred ECCCCccCC-cCcccc-CcccEEEccCCccC---------------------C-Ch-hhcCcccccEEECCCCcCCCC-h
Confidence 888888876 344444 77777777777663 3 23 478899999999999999975 4
Q ss_pred hhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCcc
Q 003926 289 QALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQ 334 (786)
Q Consensus 289 ~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~ 334 (786)
.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 689999999999999999987 6788999999999999999865
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=7.4e-18 Score=166.56 Aligned_cols=152 Identities=13% Similarity=0.227 Sum_probs=103.7
Q ss_pred CCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCE
Q 003926 128 SRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRV 207 (786)
Q Consensus 128 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 207 (786)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 56778888888888887 455 5778888888888888654 3346777888888888888887767777777888888
Q ss_pred EEccCCcCCcCCC-CCCCCCcCCEEEcccCC-CCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccC
Q 003926 208 LALSNNHFYGEVP-DFSGLTYLQVLDLENNA-LGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVG 285 (786)
Q Consensus 208 L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~-l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 285 (786)
|+|++|.+++..| .+..+++|++|+|++|. + +.+| .+..+++|+.|+|++|++++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i----------------------~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAI----------------------TDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBC----------------------CCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCc----------------------cccH-hhcCCCCCCEEECCCCCCcC
Confidence 8888877776444 36666777777766665 3 2233 35566667777777776664
Q ss_pred CCchhhCCCCCCcEEEeecCCCC
Q 003926 286 PFPQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 286 ~~p~~~~~l~~L~~L~l~~N~l~ 308 (786)
++ .+..+++|+.|++++|++.
T Consensus 174 -~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 174 -YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp -CT-TGGGCSSCCEEEECBC---
T ss_pred -hH-HhccCCCCCEEEeeCcccC
Confidence 22 5666666666666666654
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=9.8e-18 Score=164.93 Aligned_cols=111 Identities=28% Similarity=0.293 Sum_probs=65.1
Q ss_pred CCCEEEccCCCCccCCCc-cCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 108 DLKVLRLVSLGLWGPLSG-KISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
+|++|+|++|.+++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 556666666666555443 3556666666666666666555555666666666666666665555555555566666666
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE 218 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 218 (786)
++|++++..|..|..+++|+.|+|++|.+++.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 66666555555555555555555555555543
No 371
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.72 E-value=1.2e-19 Score=211.00 Aligned_cols=254 Identities=13% Similarity=0.098 Sum_probs=130.8
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCC--------------------------CCCCCccccCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFL--------------------------NGAIPQELSILTS 156 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l--------------------------~~~~p~~~~~l~~ 156 (786)
+.++++|++|+|++|.+.+ +|..+.++++|+.|+++.+.. .+.+|..+..+++
T Consensus 216 ~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~ 294 (592)
T 3ogk_B 216 ARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQ 294 (592)
T ss_dssp HHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGG
T ss_pred HhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCC
Confidence 4455666666666665554 334444445555555443211 1223333334444
Q ss_pred CcEEEcccccCCCCCC-cccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccC-----------CcCCcC-CCC-C
Q 003926 157 LQTLILDENMLAGRVP-DWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN-----------NHFYGE-VPD-F 222 (786)
Q Consensus 157 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-----------N~l~~~-~p~-~ 222 (786)
|++|+|++|.+++... ..+..+++|+.|+++++...+.++..+..+++|+.|+|++ |.+++. ++. +
T Consensus 295 L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~ 374 (592)
T 3ogk_B 295 IRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALA 374 (592)
T ss_dssp CCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHH
T ss_pred CcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHH
Confidence 4444444444332211 2234444444444442211122222233445555555552 333321 111 2
Q ss_pred CCCCcCCEEEcccCCCCCCCCcc----ccchhhhhcc----CCccCCc-----ChhhhcCccccceeeccCc--cccCCC
Q 003926 223 SGLTYLQVLDLENNALGPQFPKV----GKKLVTMILS----KNKFRSA-----IPAEVSSYYQLQRLDLSSN--RFVGPF 287 (786)
Q Consensus 223 ~~l~~L~~L~L~~N~l~~~~p~~----~~~L~~L~ls----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~ 287 (786)
..+++|++|+++.|.+++..+.. .++|+.|+++ .|.+++. ++..+.++++|+.|+|++| .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 23556666666656555433221 3456666664 5666653 3444556677777777643 355544
Q ss_pred chhhC-CCCCCcEEEeecCCCCc-ccCccCCCCCCCCEEeCcCCcCCcc-CChhhhcCCCCcEEEcCCcccCC
Q 003926 288 PQALL-SLPSITYLNIADNKLTG-KLFDDLSCNPELGFVDLSSNLLTGQ-LPNCLLAGSKNRVVLYARNCLAA 357 (786)
Q Consensus 288 p~~~~-~l~~L~~L~l~~N~l~g-~~~~~~~~~~~L~~l~ls~N~l~g~-~p~~~~~~~~~~~~~~~~N~l~~ 357 (786)
+..+. .+++|+.|++++|++++ .++..+..+++|+.|++++|.+++. ++.....+++++.+++++|.++.
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 44443 36777777777777776 3344456677788888888877654 34444556777778877777654
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=4e-17 Score=160.56 Aligned_cols=131 Identities=23% Similarity=0.255 Sum_probs=117.0
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCc-cccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQ-ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
++|++++|++. .+|..+.. +|+.|+|++|+|++..+. .|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56788888884 45655543 899999999999988775 489999999999999999999999999999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCC
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFP 243 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p 243 (786)
|+|++..|..|.++++|++|+|++|++++.+|. |..+++|++|+|++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999998999999999999999999998775 8899999999999999987654
No 373
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=6.5e-17 Score=155.31 Aligned_cols=134 Identities=25% Similarity=0.220 Sum_probs=120.3
Q ss_pred CCCCCCEEEccCCCCc-cCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 105 KLPDLKVLRLVSLGLW-GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
..++|+.|+|++|.+. +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 78898899999999999999999876 78999999999999999999888998989999999
Q ss_pred EEccCCcCcccC-CccccCCCCCCEEEccCCcCCcCCC----CCCCCCcCCEEEcccCCCCC
Q 003926 184 LSLRNNMFNGTL-PDSFSYLENLRVLALSNNHFYGEVP----DFSGLTYLQVLDLENNALGP 240 (786)
Q Consensus 184 L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~L~~N~l~~ 240 (786)
|+|++|.+++.. +..+..+++|+.|++++|.+++..+ .+..+++|++|++++|.+..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 999999998642 2789999999999999999998877 58889999999999998753
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.68 E-value=6.6e-20 Score=210.32 Aligned_cols=188 Identities=19% Similarity=0.153 Sum_probs=154.4
Q ss_pred cCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCc-------------CcccCCccccCCCCCCEEE-ccCCcCCc
Q 003926 152 SILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM-------------FNGTLPDSFSYLENLRVLA-LSNNHFYG 217 (786)
Q Consensus 152 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 217 (786)
..+++|+.|+|++|+++ .+|..+++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56788888888888886 778888888888888887775 5666777777777787777 666644
Q ss_pred CCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCC
Q 003926 218 EVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSI 297 (786)
Q Consensus 218 ~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 297 (786)
.+|+.+.+++|.++...+ ..|+.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..|+++++|
T Consensus 423 --------~~L~~l~l~~n~i~~l~~---~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L 488 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY---ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCL 488 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH---TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTC
T ss_pred --------chhhhhhhhcccccccCc---cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCC
Confidence 234445555555432211 247778888888877 676 999999999999999999 789999999999
Q ss_pred cEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccC-ChhhhcCCCCcEEEcCCcccCCC
Q 003926 298 TYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQL-PNCLLAGSKNRVVLYARNCLAAG 358 (786)
Q Consensus 298 ~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~-p~~~~~~~~~~~~~~~~N~l~~~ 358 (786)
+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..+..++++..+++++|.+++.
T Consensus 489 ~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 489 EVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp CEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 999999999998 56 8999999999999999999987 99999999999999999999873
No 375
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=6.5e-17 Score=151.99 Aligned_cols=129 Identities=27% Similarity=0.257 Sum_probs=115.8
Q ss_pred CCCCCCEEEccCCCCc-cCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCE
Q 003926 105 KLPDLKVLRLVSLGLW-GPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAV 183 (786)
Q Consensus 105 ~l~~L~~L~L~~n~l~-g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 183 (786)
..++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999998 88899999999999999999999976 77899999999999999999888998989999999
Q ss_pred EEccCCcCccc-CCccccCCCCCCEEEccCCcCCcCCC----CCCCCCcCCEEEccc
Q 003926 184 LSLRNNMFNGT-LPDSFSYLENLRVLALSNNHFYGEVP----DFSGLTYLQVLDLEN 235 (786)
Q Consensus 184 L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~L~~ 235 (786)
|++++|.+++. .+..++.+++|+.|++++|.+++..+ .+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999874 44789999999999999999998776 488899999998864
No 376
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.65 E-value=6.2e-18 Score=196.53 Aligned_cols=248 Identities=12% Similarity=0.012 Sum_probs=172.7
Q ss_pred CCCEEEccCCC-Ccc-CCCccCCCCCCCCEEeccCCCCCCC----CCccccCCCCCcEEEcccccCCC----CCCcccCC
Q 003926 108 DLKVLRLVSLG-LWG-PLSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLAG----RVPDWLGS 177 (786)
Q Consensus 108 ~L~~L~L~~n~-l~g-~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~ 177 (786)
+|++|+|++|. +.. .++....++++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48899998876 211 1233334788899999999988765 44455678889999999998873 34555678
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCc----CCCCCCCCCcCCEEEcccCCCCCCCCcc---ccchh
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYG----EVPDFSGLTYLQVLDLENNALGPQFPKV---GKKLV 250 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~ 250 (786)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++.+.... ....+..+++|+.|+++++.. ..+|.. .++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCc
Confidence 8899999999988876 66778888899999988643321 112367778888888887532 334433 46788
Q ss_pred hhhccCCccCCcCh-hhhcCccccceeeccCccccCCCchhhCCCCCCcEEEee-----------cCCCCcccCc-cCCC
Q 003926 251 TMILSKNKFRSAIP-AEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA-----------DNKLTGKLFD-DLSC 317 (786)
Q Consensus 251 ~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~-----------~N~l~g~~~~-~~~~ 317 (786)
+|++++|.+++... ..+..+++|+.|+|++|-..+.++..+..+++|+.|+++ .|.+++.... ....
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 88888888765444 346788888888888443334455555678888888888 3666654222 2345
Q ss_pred CCCCCEEeCcCCcCCccCChhhhc-CCCCcEEEcC----CcccCC
Q 003926 318 NPELGFVDLSSNLLTGQLPNCLLA-GSKNRVVLYA----RNCLAA 357 (786)
Q Consensus 318 ~~~L~~l~ls~N~l~g~~p~~~~~-~~~~~~~~~~----~N~l~~ 357 (786)
+++|+.|+++.|.+++..+..+.. +++++.+.++ .|.+++
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 788888888888888777766655 6778888885 555554
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=4e-16 Score=149.79 Aligned_cols=106 Identities=28% Similarity=0.217 Sum_probs=67.4
Q ss_pred CCCCCEEeccCCCCC-CCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEE
Q 003926 130 LSSLEILNMSSNFLN-GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVL 208 (786)
Q Consensus 130 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 208 (786)
.++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 366777777777776 66676677777777777777777654 566667777777777777766666666666666666
Q ss_pred EccCCcCCcCC--CCCCCCCcCCEEEcccCC
Q 003926 209 ALSNNHFYGEV--PDFSGLTYLQVLDLENNA 237 (786)
Q Consensus 209 ~Ls~N~l~~~~--p~~~~l~~L~~L~L~~N~ 237 (786)
+|++|.+++.. +.+..+++|++|++++|.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~ 131 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCE 131 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSG
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCc
Confidence 66666665432 234444444444444433
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.9e-15 Score=146.34 Aligned_cols=112 Identities=25% Similarity=0.242 Sum_probs=64.9
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|++.+..+..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 45666666666666555555566666666666666666555555556666666666666665554455555555555555
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCcC
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYGE 218 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 218 (786)
++|.+++..+..|..+++|+.|+|++|.+++.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 55555544444445555555555555555543
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=3.8e-15 Score=144.23 Aligned_cols=132 Identities=28% Similarity=0.261 Sum_probs=113.6
Q ss_pred CCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 109 LKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 109 L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
.+.+++++|++... |..+ .++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 35677777877654 4333 37899999999999988888889999999999999999987778899999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCcCCcCCCC-CCCCCcCCEEEcccCCCCCCCC
Q 003926 189 NMFNGTLPDSFSYLENLRVLALSNNHFYGEVPD-FSGLTYLQVLDLENNALGPQFP 243 (786)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~p 243 (786)
|.+++..+..|.++++|+.|+|++|.+++.++. |..+++|++|+|++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999988777889999999999999999977665 6789999999999998876554
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=4.6e-15 Score=145.81 Aligned_cols=106 Identities=25% Similarity=0.332 Sum_probs=58.3
Q ss_pred CCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEcc
Q 003926 132 SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALS 211 (786)
Q Consensus 132 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 211 (786)
+|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555555555554 344555555555555555555555545555555555555555555555555555555555555555
Q ss_pred CCcCCcCCCC-CCCCCcCCEEEcccCCC
Q 003926 212 NNHFYGEVPD-FSGLTYLQVLDLENNAL 238 (786)
Q Consensus 212 ~N~l~~~~p~-~~~l~~L~~L~L~~N~l 238 (786)
+|.+++..+. |..+++|+.|+|++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 5555544443 55555566666555554
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.1e-15 Score=143.64 Aligned_cols=126 Identities=21% Similarity=0.243 Sum_probs=58.4
Q ss_pred CCCEEEccCCcCc-ccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCCCCccccchhhhhccCCc
Q 003926 180 ILAVLSLRNNMFN-GTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNK 258 (786)
Q Consensus 180 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~ 258 (786)
+|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. +.+..+++|++|+|++|.++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~------------------- 77 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVS------------------- 77 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCC-------------------
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCccc-------------------
Confidence 3444444444444 44444444445555555555544443 33444445555544444432
Q ss_pred cCCcChhhhcCccccceeeccCccccCC-CchhhCCCCCCcEEEeecCCCCcccC---ccCCCCCCCCEEeCc
Q 003926 259 FRSAIPAEVSSYYQLQRLDLSSNRFVGP-FPQALLSLPSITYLNIADNKLTGKLF---DDLSCNPELGFVDLS 327 (786)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~~---~~~~~~~~L~~l~ls 327 (786)
+.+|..+..+++|+.|+|++|++++. .|..+..+++|+.|++++|++++..+ ..+..+++|+.||++
T Consensus 78 --~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 78 --GGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp --SCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred --chHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 22333344444455555555554432 22444455555555555555544433 234444555555443
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=6.3e-15 Score=144.82 Aligned_cols=110 Identities=28% Similarity=0.306 Sum_probs=103.6
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEc
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSL 186 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 186 (786)
++|++|+|++|.++ .+|..|.++++|+.|+|++|.|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 57999999999997 56789999999999999999999998999999999999999999999988899999999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 003926 187 RNNMFNGTLPDSFSYLENLRVLALSNNHFYG 217 (786)
Q Consensus 187 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 217 (786)
++|.+++..+..|..+++|+.|+|++|.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999998777789999999999999999874
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=5.6e-16 Score=166.11 Aligned_cols=152 Identities=13% Similarity=0.115 Sum_probs=101.5
Q ss_pred HHHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCC--------------CChHHHHHHHHHHhcCCCCCcc
Q 003926 471 ELEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKC--------------HSTRNFMHHIELISKLRHRHLV 536 (786)
Q Consensus 471 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--------------~~~~~f~~E~~~l~~l~H~NIv 536 (786)
.+...-.-|.+...||+|+||.||+|..++|+.||||+++.... .....++.++++.....|+|++
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33333344888999999999999999988999999998764211 0112333444333333444444
Q ss_pred eeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccccCCCCCc
Q 003926 537 SALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFSNNLKITD 616 (786)
Q Consensus 537 ~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivHrdlk~~N 616 (786)
+++.........- .....+|||||+++++|.++... . ....++.|++.+|.|||+. +||||||||.|
T Consensus 169 rL~~~gv~vp~p~-~~~~~~LVME~i~G~~L~~l~~~-------~--~~~~l~~qll~~l~~lH~~---gIVHrDLKp~N 235 (397)
T 4gyi_A 169 ALYEEGFPVPEPI-AQSRHTIVMSLVDALPMRQVSSV-------P--DPASLYADLIALILRLAKH---GLIHGDFNEFN 235 (397)
T ss_dssp HHHHTTCSCCCEE-EEETTEEEEECCSCEEGGGCCCC-------S--CHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred HHHhcCCCCCeee-eccCceEEEEecCCccHhhhccc-------H--HHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence 4432211100000 00123799999999998765432 1 1245788999999999997 99999999999
Q ss_pred eeecCCCc----------ccccCCCcccc
Q 003926 617 ILLDQNLV----------AKISSYNLPLL 635 (786)
Q Consensus 617 ILld~~~~----------~kl~DfGl~~~ 635 (786)
||+++++. +.|.||+-+..
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred EEEeCCCCcccccccccceEEEEeCCccc
Confidence 99998773 78999997643
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=3.3e-17 Score=161.99 Aligned_cols=82 Identities=26% Similarity=0.316 Sum_probs=36.2
Q ss_pred CCCEEeccCCCCCCCCCc------cccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC
Q 003926 132 SLEILNMSSNFLNGAIPQ------ELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (786)
Q Consensus 132 ~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 205 (786)
.++.++++.|.++|.+|. .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444444333 44444444444444444443 33 4444444444444444444 234334444444
Q ss_pred CEEEccCCcCC
Q 003926 206 RVLALSNNHFY 216 (786)
Q Consensus 206 ~~L~Ls~N~l~ 216 (786)
+.|+|++|+++
T Consensus 96 ~~L~L~~N~l~ 106 (198)
T 1ds9_A 96 EELWISYNQIA 106 (198)
T ss_dssp SEEEEEEEECC
T ss_pred CEEECcCCcCC
Confidence 44444444444
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3e-15 Score=144.86 Aligned_cols=132 Identities=20% Similarity=0.227 Sum_probs=109.1
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCC-CCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLS-SLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPI 180 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 180 (786)
.+.++++|+.|+|++|++... |. +..+. +|+.|+|++|.+++. ..+..+++|++|+|++|++++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 456788999999999999854 54 44444 999999999999876 67889999999999999998766666789999
Q ss_pred CCEEEccCCcCcccCCc--cccCCCCCCEEEccCCcCCcCCCC----CCCCCcCCEEEcccCCC
Q 003926 181 LAVLSLRNNMFNGTLPD--SFSYLENLRVLALSNNHFYGEVPD----FSGLTYLQVLDLENNAL 238 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~l~~L~~L~L~~N~l 238 (786)
|++|+|++|.+. .+|. .+..+++|+.|++++|.++...+. +..+++|+.||+++|.+
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 999999999996 4665 788999999999999999855443 77889999999988865
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=8.5e-17 Score=159.04 Aligned_cols=155 Identities=23% Similarity=0.219 Sum_probs=105.0
Q ss_pred ccCCCCCcEEEcccccCCCCCCc------ccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCC
Q 003926 151 LSILTSLQTLILDENMLAGRVPD------WLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSG 224 (786)
Q Consensus 151 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 224 (786)
+.....++.++++.|.++|.+|. .|..+++|++|+|++|.+++ +| .+.++++|+.|+|++|.++.....+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhc
Confidence 44556677777777777777765 67777777777777777765 55 677777777777777777632222444
Q ss_pred CCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCc-hhhCCCCCCcEEEee
Q 003926 225 LTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFP-QALLSLPSITYLNIA 303 (786)
Q Consensus 225 l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~ 303 (786)
+++|++|+|++|.++ + +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|+++
T Consensus 92 ~~~L~~L~L~~N~l~---------------------~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~ 148 (198)
T 1ds9_A 92 ADTLEELWISYNQIA---------------------S-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLA 148 (198)
T ss_dssp HHHCSEEEEEEEECC---------------------C-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEEC
T ss_pred CCcCCEEECcCCcCC---------------------c-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEec
Confidence 566666666666553 3 34 46677788888888888875332 467788888888888
Q ss_pred cCCCCcccCcc----------CCCCCCCCEEeCcCCcCC
Q 003926 304 DNKLTGKLFDD----------LSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 304 ~N~l~g~~~~~----------~~~~~~L~~l~ls~N~l~ 332 (786)
+|.+++.+|.. +..+++|+.|| +|.++
T Consensus 149 ~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 149 GNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 88887766543 56677777776 55554
No 387
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.53 E-value=7.8e-17 Score=187.29 Aligned_cols=275 Identities=13% Similarity=0.054 Sum_probs=157.8
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccCCCCCCCEEEccCCC--CccC-CCccCCCCCCCCEEeccCCCCCCCCCcc
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLVKLPDLKVLRLVSLG--LWGP-LSGKISRLSSLEILNMSSNFLNGAIPQE 150 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~--l~g~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 150 (786)
.+++.|+++++.+++.-+. .++.....+++|+.|+|++|. +... ++..+.++++|+.|+|++|...+.+|..
T Consensus 156 ~~L~~L~L~~~~i~~~~~~-----~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~ 230 (594)
T 2p1m_B 156 RNLKELDLRESDVDDVSGH-----WLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATL 230 (594)
T ss_dssp TTCCEEECTTCEEECCCGG-----GGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHH
T ss_pred CCCCEEeCcCCccCCcchH-----HHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHH
Confidence 4788999988765432111 122223366677777777765 2111 1112234577777777776322225555
Q ss_pred ccCCCCCcEEEccccc--------------------------CC----CCCCcccCCCCCCCEEEccCCcCcccCC-ccc
Q 003926 151 LSILTSLQTLILDENM--------------------------LA----GRVPDWLGSLPILAVLSLRNNMFNGTLP-DSF 199 (786)
Q Consensus 151 ~~~l~~L~~L~L~~N~--------------------------l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~ 199 (786)
+..+++|+.|+++.+. +. +.+|..+..+++|+.|+|++|.+++... ..+
T Consensus 231 ~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~ 310 (594)
T 2p1m_B 231 LQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLL 310 (594)
T ss_dssp HHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHH
T ss_pred HhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHH
Confidence 5556666666544331 11 1234444467788888888887664322 235
Q ss_pred cCCCCCCEEEccCCcCCc-CCCC-CCCCCcCCEEEccc---------CCCCCCCC----ccccchhhhhccCCccCCcCh
Q 003926 200 SYLENLRVLALSNNHFYG-EVPD-FSGLTYLQVLDLEN---------NALGPQFP----KVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 200 ~~l~~L~~L~Ls~N~l~~-~~p~-~~~l~~L~~L~L~~---------N~l~~~~p----~~~~~L~~L~ls~N~l~~~~p 264 (786)
.++++|+.|++++| ++. .++. ...+++|+.|+|++ |.++.... ...++|+.|+++.|.+++..+
T Consensus 311 ~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~ 389 (594)
T 2p1m_B 311 CQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAAL 389 (594)
T ss_dssp TTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHH
T ss_pred hcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHH
Confidence 57788888888877 331 1222 22467788887743 33322111 113567777777777766555
Q ss_pred hhhc-Cccccceeecc--C----ccccC-----CCchhhCCCCCCcEEEeecCCCCcccCccCCC-CCCCCEEeCcCCcC
Q 003926 265 AEVS-SYYQLQRLDLS--S----NRFVG-----PFPQALLSLPSITYLNIADNKLTGKLFDDLSC-NPELGFVDLSSNLL 331 (786)
Q Consensus 265 ~~~~-~l~~L~~L~Ls--~----N~l~~-----~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~-~~~L~~l~ls~N~l 331 (786)
..+. .+++|+.|+|+ + |++++ .++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+
T Consensus 390 ~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 390 ITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp HHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 5554 46777777777 3 45542 1223356677777777766 566555444443 66777777777777
Q ss_pred CccCChhh-hcCCCCcEEEcCCccc
Q 003926 332 TGQLPNCL-LAGSKNRVVLYARNCL 355 (786)
Q Consensus 332 ~g~~p~~~-~~~~~~~~~~~~~N~l 355 (786)
++..+..+ ..+++++.+++++|.+
T Consensus 469 ~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 469 SDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp SHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred cHHHHHHHHhcCCCcCEEECcCCCC
Confidence 65544444 4466777777777766
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=1.5e-14 Score=139.84 Aligned_cols=40 Identities=20% Similarity=0.287 Sum_probs=19.5
Q ss_pred hcCccccceeeccCccccCCCch----hhCCCCCCcEEEeecCCC
Q 003926 267 VSSYYQLQRLDLSSNRFVGPFPQ----ALLSLPSITYLNIADNKL 307 (786)
Q Consensus 267 ~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l 307 (786)
+..+++|+.|+|++|.++. +|. .+..+++|+.||+++|.+
T Consensus 109 l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 109 LASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp GGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred hhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 4444555555555555542 233 244555555555555544
No 389
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.52 E-value=2.9e-16 Score=182.43 Aligned_cols=244 Identities=15% Similarity=0.138 Sum_probs=107.6
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCccccccC-CCCCCCEEEccCC-CCccC-CCccCCCCCCCCEEeccCCCCCCCCCcc
Q 003926 74 ESITQLHIVGNKRAPMLPLSFSMDSFVTTLV-KLPDLKVLRLVSL-GLWGP-LSGKISRLSSLEILNMSSNFLNGAIPQE 150 (786)
Q Consensus 74 ~~v~~l~l~~~~~~~~l~~~~~~~~~~~~l~-~l~~L~~L~L~~n-~l~g~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 150 (786)
.+++.|+|+++.+++.. +..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..
T Consensus 105 ~~L~~L~L~~~~~~~~~---------~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~ 175 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDC---------LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHW 175 (594)
T ss_dssp TTCCEEEEESCBCCHHH---------HHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGG
T ss_pred CCCCeEEeeCcEEcHHH---------HHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHH
Confidence 35677777766533211 11222 3455555555555 33221 2233334555555555555554433322
Q ss_pred c----cCCCCCcEEEccccc--CCC-CCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCc---------
Q 003926 151 L----SILTSLQTLILDENM--LAG-RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNH--------- 214 (786)
Q Consensus 151 ~----~~l~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--------- 214 (786)
+ ..+++|+.|+|++|. +.. .++..+..+++|+.|+|++|...+.+|..+.++++|+.|+++.+.
T Consensus 176 l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 255 (594)
T 2p1m_B 176 LSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYS 255 (594)
T ss_dssp GGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHH
T ss_pred HHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHH
Confidence 2 244455555555554 110 011112334555555555552111234444444444444433221
Q ss_pred -----------------CCc----CCCC-CCCCCcCCEEEcccCCCCCCCCc----cccchhhhhccCCccCC-cChhhh
Q 003926 215 -----------------FYG----EVPD-FSGLTYLQVLDLENNALGPQFPK----VGKKLVTMILSKNKFRS-AIPAEV 267 (786)
Q Consensus 215 -----------------l~~----~~p~-~~~l~~L~~L~L~~N~l~~~~p~----~~~~L~~L~ls~N~l~~-~~p~~~ 267 (786)
+.. .++. +..+++|+.|+|++|.+++.... ..++|+.|++++| ++. .++...
T Consensus 256 ~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~ 334 (594)
T 2p1m_B 256 GLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLA 334 (594)
T ss_dssp HHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHH
T ss_pred HHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHH
Confidence 000 0111 12346667777766665432111 2345666666655 221 122222
Q ss_pred cCccccceeec---------cCccccCCCchhhC-CCCCCcEEEeecCCCCcccCccCC-CCCCCCEEeCc
Q 003926 268 SSYYQLQRLDL---------SSNRFVGPFPQALL-SLPSITYLNIADNKLTGKLFDDLS-CNPELGFVDLS 327 (786)
Q Consensus 268 ~~l~~L~~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~g~~~~~~~-~~~~L~~l~ls 327 (786)
..+++|+.|+| +.|.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+++
T Consensus 335 ~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 335 STCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp HHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred HhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 34555666655 22344332222222 255566666555665554443332 34556666665
No 390
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.51 E-value=1.7e-14 Score=154.50 Aligned_cols=235 Identities=16% Similarity=0.181 Sum_probs=145.7
Q ss_pred CCCCCEEEccCCCCc--cCCCccCCCCCCCCEEeccCCCCCCCCCccccC--------CCCCcEEEcccccCCCCCCccc
Q 003926 106 LPDLKVLRLVSLGLW--GPLSGKISRLSSLEILNMSSNFLNGAIPQELSI--------LTSLQTLILDENMLAGRVPDWL 175 (786)
Q Consensus 106 l~~L~~L~L~~n~l~--g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~ 175 (786)
+++|+.|||++|++. ...++.+ +.+..+.+..|.+ .+..|.+ |++|+.|+|.+ .++..-+..|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 667777777777776 2222222 2234444444422 2344555 77777777777 6665555677
Q ss_pred CCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCC---cCCC--CCCCCCcC----------------------
Q 003926 176 GSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFY---GEVP--DFSGLTYL---------------------- 228 (786)
Q Consensus 176 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p--~~~~l~~L---------------------- 228 (786)
.+|++|+.|++++|.+....+..|.++.++..+.+..+... ..+. .|.++..|
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 77777777777777777666667777666666665542210 0011 13233333
Q ss_pred ----CEEEcccCCCCCCCC---ccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCc-EE
Q 003926 229 ----QVLDLENNALGPQFP---KVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSIT-YL 300 (786)
Q Consensus 229 ----~~L~L~~N~l~~~~p---~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L 300 (786)
+.+.+.++-....+. ....+|+.++|++|+++...+..|.++.+|+.|+|.+| +...-+.+|.++++|+ .|
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 333333321100000 01356778888888887766677888888888888887 7666667788888888 88
Q ss_pred EeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEE
Q 003926 301 NIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVL 349 (786)
Q Consensus 301 ~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~ 349 (786)
++.+ +++...+..|..+++|+.+++++|+++..-+..+..+.+++.+.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 8877 67766677788888888888888888765566666666666553
No 391
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=1.2e-13 Score=132.79 Aligned_cols=106 Identities=24% Similarity=0.245 Sum_probs=58.2
Q ss_pred CEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCC
Q 003926 110 KVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNN 189 (786)
Q Consensus 110 ~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 189 (786)
+.|++++|+++. +|..+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 345555555544 23333 255566666666666555555555666666666666655544455555555666666666
Q ss_pred cCcccCCccccCCCCCCEEEccCCcCCcC
Q 003926 190 MFNGTLPDSFSYLENLRVLALSNNHFYGE 218 (786)
Q Consensus 190 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 218 (786)
+|++..+..|.++++|+.|+|++|.++..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 55554444455555555555555555443
No 392
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=2.4e-13 Score=131.07 Aligned_cols=104 Identities=21% Similarity=0.267 Sum_probs=54.8
Q ss_pred EEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCc
Q 003926 111 VLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNM 190 (786)
Q Consensus 111 ~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 190 (786)
.+++++|++. .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 3444444442 2333332 455555555555555555555555555555555555554444445555555555555555
Q ss_pred CcccCCccccCCCCCCEEEccCCcCCc
Q 003926 191 FNGTLPDSFSYLENLRVLALSNNHFYG 217 (786)
Q Consensus 191 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 217 (786)
|++..+..|.++++|+.|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 554444445555555555555555543
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=5.3e-13 Score=128.64 Aligned_cols=106 Identities=25% Similarity=0.301 Sum_probs=95.3
Q ss_pred CCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccC
Q 003926 133 LEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSN 212 (786)
Q Consensus 133 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 212 (786)
-+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999996 6777664 8999999999999999999999999999999999999987777789999999999999
Q ss_pred CcCCcCCCC-CCCCCcCCEEEcccCCCCCC
Q 003926 213 NHFYGEVPD-FSGLTYLQVLDLENNALGPQ 241 (786)
Q Consensus 213 N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~ 241 (786)
|+|++.++. |..+++|++|+|++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999987776 89999999999999988643
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=3.3e-13 Score=129.56 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=83.4
Q ss_pred CEEEcccCCCCCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCC
Q 003926 229 QVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 229 ~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 308 (786)
+.|++++|.++..+....++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 12 ~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~ 91 (170)
T 3g39_A 12 TTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK 91 (170)
T ss_dssp TEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccC
Confidence 34444444444332233345555666666666777888889999999999999999888888899999999999999999
Q ss_pred cccCccCCCCCCCCEEeCcCCcCCccCC
Q 003926 309 GKLFDDLSCNPELGFVDLSSNLLTGQLP 336 (786)
Q Consensus 309 g~~~~~~~~~~~L~~l~ls~N~l~g~~p 336 (786)
+..+..+..+++|+.|+|++|.++...+
T Consensus 92 ~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 92 SIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred EeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 8888788899999999999999986654
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.41 E-value=4.2e-13 Score=143.65 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=70.3
Q ss_pred CCcCCEEEcccCCCCCCCCcc---ccchhhhhccCCccCCcChhhhcCccccc-eeeccCccccCCCchhhCCCCCCcEE
Q 003926 225 LTYLQVLDLENNALGPQFPKV---GKKLVTMILSKNKFRSAIPAEVSSYYQLQ-RLDLSSNRFVGPFPQALLSLPSITYL 300 (786)
Q Consensus 225 l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 300 (786)
+++|+.|+|++|+++...+.. +.+|+.+++.+| ++..-+..|.++.+|+ .|+|.+ +++..-+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 344555555555443222221 234555555554 5555566788899998 999988 7776777889999999999
Q ss_pred EeecCCCCcccCccCCCCCCCCEEeC
Q 003926 301 NIADNKLTGKLFDDLSCNPELGFVDL 326 (786)
Q Consensus 301 ~l~~N~l~g~~~~~~~~~~~L~~l~l 326 (786)
++++|+++...+..|..+++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99999999888888988999988763
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.38 E-value=1e-11 Score=136.01 Aligned_cols=214 Identities=12% Similarity=0.042 Sum_probs=106.5
Q ss_pred CCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEcc
Q 003926 108 DLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLR 187 (786)
Q Consensus 108 ~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 187 (786)
+|+.+.|..+ +...-...|.+. +|+.++|.. .++..-+..|.+|++|+.++|+.|.++......|. .++|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 5666666544 555555556553 466666664 45545555666666666666666666543334444 4666666666
Q ss_pred CCcCcccCCccccCCCCCCEEEccCCcCCcCCC-CCCCCCcCCEEEcccCCCCCC---CCccccchhhhhccCCccC---
Q 003926 188 NNMFNGTLPDSFSYLENLRVLALSNNHFYGEVP-DFSGLTYLQVLDLENNALGPQ---FPKVGKKLVTMILSKNKFR--- 260 (786)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~---~p~~~~~L~~L~ls~N~l~--- 260 (786)
+| +...-...|.++++|+.++|..| ++..-. .|.+ ++|+.+.|.++ +... ....+.+|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-ccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 33 55444555666666666666654 221111 2444 55666666322 2211 1111234444444444432
Q ss_pred --CcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCC
Q 003926 261 --SAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLT 332 (786)
Q Consensus 261 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~ 332 (786)
..-+..|.++++|+.++|. |.+...-..+|.++++|+.++|..| ++..-...|..+ +|+.+++++|.+.
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 2223344555555555555 2344333444555555555555332 433334444444 5555555555443
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.30 E-value=3.6e-11 Score=131.74 Aligned_cols=219 Identities=10% Similarity=0.068 Sum_probs=171.8
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+.+ .+|+.+.|.+ .+...-+..|.++++|+.++|+.|.++......|. +++|+.+.|..| ++..-...|.++++|+
T Consensus 154 F~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~ 229 (401)
T 4fdw_A 154 FFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLK 229 (401)
T ss_dssp TTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCC
Confidence 444 4799999986 77777788999999999999999999976666776 699999999855 7656667899999999
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCC-CCCCCCCcCCEEEcccCCCCCC----CC----ccccchhhhh
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEV-PDFSGLTYLQVLDLENNALGPQ----FP----KVGKKLVTMI 253 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~l~~L~~L~L~~N~l~~~----~p----~~~~~L~~L~ 253 (786)
.+++..| ++..-...|.+ .+|+.+.|.+ .++... ..|.++++|+.+++.+|.+... ++ ..+.+|+.+.
T Consensus 230 ~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~ 306 (401)
T 4fdw_A 230 TIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFE 306 (401)
T ss_dssp CEECCTT-CCEECTTTTTT-CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEEC
T ss_pred EEecCCC-ccCcccccccc-CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEE
Confidence 9999975 56566677887 7899999954 454332 2499999999999999876511 22 2346899999
Q ss_pred ccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCC-CCCEEeCcCCcC
Q 003926 254 LSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNP-ELGFVDLSSNLL 331 (786)
Q Consensus 254 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~-~L~~l~ls~N~l 331 (786)
+. |.++..-...|.++.+|+.|+|..| ++..-+.+|.++ +|+.|++++|.+.......|..++ .+..|.+..|.+
T Consensus 307 l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 307 IP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp CC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred eC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 98 5577777788999999999999665 776667889999 999999999988766666666553 566666655543
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=4.9e-12 Score=136.36 Aligned_cols=88 Identities=24% Similarity=0.216 Sum_probs=39.1
Q ss_pred CCCCCCCCEEeccC-CCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCC
Q 003926 127 ISRLSSLEILNMSS-NFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENL 205 (786)
Q Consensus 127 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 205 (786)
|..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..+..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444444443 444444444444444444444444444444444444444444444444444433333333332 4
Q ss_pred CEEEccCCcC
Q 003926 206 RVLALSNNHF 215 (786)
Q Consensus 206 ~~L~Ls~N~l 215 (786)
+.|+|++|.+
T Consensus 106 ~~l~l~~N~~ 115 (347)
T 2ifg_A 106 QELVLSGNPL 115 (347)
T ss_dssp CEEECCSSCC
T ss_pred eEEEeeCCCc
Confidence 4444444433
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=1.3e-11 Score=133.04 Aligned_cols=105 Identities=23% Similarity=0.150 Sum_probs=92.1
Q ss_pred CEEeccCC-CCCCCCCccccCCCCCcEEEccc-ccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEcc
Q 003926 134 EILNMSSN-FLNGAIPQELSILTSLQTLILDE-NMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALS 211 (786)
Q Consensus 134 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 211 (786)
..++++++ +|++ +|. +..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 8885 777 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred CCcCCcCCCCCCCCCcCCEEEcccCCCCC
Q 003926 212 NNHFYGEVPDFSGLTYLQVLDLENNALGP 240 (786)
Q Consensus 212 ~N~l~~~~p~~~~l~~L~~L~L~~N~l~~ 240 (786)
+|+|++.++.......|+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999877764333349999999998854
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.21 E-value=8.8e-14 Score=151.03 Aligned_cols=68 Identities=19% Similarity=0.164 Sum_probs=33.0
Q ss_pred hhcCccccceeeccCccccC----CCchhhCCCCCCcEEEeecCCCCcccCccCC---CCC--CCCEEe--CcCCcCCc
Q 003926 266 EVSSYYQLQRLDLSSNRFVG----PFPQALLSLPSITYLNIADNKLTGKLFDDLS---CNP--ELGFVD--LSSNLLTG 333 (786)
Q Consensus 266 ~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~---~~~--~L~~l~--ls~N~l~g 333 (786)
.+...++|+.|||++|.|+. .++..+...++|++|+|++|.|++.....+. ... .|+.+. +..|.++.
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccCH
Confidence 34444556666666666653 2334444556677777777776644332221 112 156666 66666653
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=9.1e-14 Score=150.91 Aligned_cols=78 Identities=18% Similarity=0.125 Sum_probs=57.0
Q ss_pred hhhhcCccccceeeccCccccC----CCchhhCCCCCCcEEEeecCCCCcc----cCccCCCCCCCCEEeCcCCcCCccC
Q 003926 264 PAEVSSYYQLQRLDLSSNRFVG----PFPQALLSLPSITYLNIADNKLTGK----LFDDLSCNPELGFVDLSSNLLTGQL 335 (786)
Q Consensus 264 p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~g~----~~~~~~~~~~L~~l~ls~N~l~g~~ 335 (786)
+..+...++|++|||++|.|.. .++..+...++|+.|+|++|.|++. +...+..++.|+.|||++|.|+..-
T Consensus 176 ~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g 255 (372)
T 3un9_A 176 MEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEG 255 (372)
T ss_dssp HHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHH
T ss_pred HHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHH
Confidence 3445566778888888888764 2356677888999999999999864 3344556788999999999998654
Q ss_pred Chhhhc
Q 003926 336 PNCLLA 341 (786)
Q Consensus 336 p~~~~~ 341 (786)
...+..
T Consensus 256 ~~~L~~ 261 (372)
T 3un9_A 256 RQVLRD 261 (372)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 402
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.12 E-value=1.6e-10 Score=119.19 Aligned_cols=146 Identities=9% Similarity=-0.020 Sum_probs=110.4
Q ss_pred HHHHhcCCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCC
Q 003926 472 LEEATNNFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDS 550 (786)
Q Consensus 472 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~ 550 (786)
+.....+|.....+|.|+.+.||+.... |..+++|+...........+.+|+++++.++ |..+.++++++..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~------ 81 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH------ 81 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE------
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec------
Confidence 3344567777788898999999999865 6789999987543233456889999999885 6677788887654
Q ss_pred CCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC----------------------------
Q 003926 551 SVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG---------------------------- 602 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~---------------------------- 602 (786)
.+..|+||||++|.+|.+.+.. ......++.+++++++.||+-
T Consensus 82 -~~~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (263)
T 3tm0_A 82 -DGWSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD 152 (263)
T ss_dssp -TTEEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred -CCceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence 3467999999999999876421 112346778899999999971
Q ss_pred ----------------------------CCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 603 ----------------------------IVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 603 ----------------------------~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
..+.++|+|+++.||+++++..+.|.||+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 0135899999999999988766779999865
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.98 E-value=4.5e-10 Score=115.37 Aligned_cols=136 Identities=15% Similarity=0.100 Sum_probs=96.0
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc--ceeeeeeeeccccCCCCceE
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL--VSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI--v~l~g~~~~~~~~~~~~~~~ 555 (786)
++......+.|..+.||+....+|..+++|..... ....+.+|+++++.+++.++ .+++++... .+..
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-------~~~~ 90 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-------AGRD 90 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-------SSCE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-------CCCC
Confidence 34333333456669999998777888999987643 23457889999999865554 446765442 2457
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC--------------------------------
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-------------------------------- 603 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-------------------------------- 603 (786)
++||||+++.+|. ... .+ ...++.++++.|+.||+..
T Consensus 91 ~~v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T 1nd4_A 91 WLLLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLD 159 (264)
T ss_dssp EEEEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCC
T ss_pred EEEEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhh
Confidence 9999999998884 211 11 2256667777788887631
Q ss_pred -----------------------CCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 604 -----------------------VPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 604 -----------------------~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
.+.++|+|+++.||+++++..++|.|||.+.
T Consensus 160 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 160 EEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp GGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999988777899999753
No 404
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.87 E-value=5e-10 Score=120.47 Aligned_cols=14 Identities=14% Similarity=-0.019 Sum_probs=7.4
Q ss_pred cCCCCCCCEEEccC
Q 003926 103 LVKLPDLKVLRLVS 116 (786)
Q Consensus 103 l~~l~~L~~L~L~~ 116 (786)
+.++++|+.|.+.+
T Consensus 135 ~~~l~~L~~L~l~~ 148 (362)
T 2ra8_A 135 KEKFAHFEGLFWGD 148 (362)
T ss_dssp HHHHTTCSEEEECC
T ss_pred hhhcchhhheeecC
Confidence 34455666665544
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=1.6e-09 Score=116.58 Aligned_cols=182 Identities=15% Similarity=0.170 Sum_probs=106.8
Q ss_pred cCCCCCCCCEEeccCCCCC---------CCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCC
Q 003926 126 KISRLSSLEILNMSSNFLN---------GAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLP 196 (786)
Q Consensus 126 ~~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 196 (786)
++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.+....-
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHH
Confidence 4556778888887665431 234455677788888888887311 2333 33 7888999888877654332
Q ss_pred cccc--CCCCCCEEEccC--CcCCcC--C----CCC--CCCCcCCEEEcccCCCCCCCCccccchhhhhccCCccCCcCh
Q 003926 197 DSFS--YLENLRVLALSN--NHFYGE--V----PDF--SGLTYLQVLDLENNALGPQFPKVGKKLVTMILSKNKFRSAIP 264 (786)
Q Consensus 197 ~~~~--~l~~L~~L~Ls~--N~l~~~--~----p~~--~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~ls~N~l~~~~p 264 (786)
..+. .+++|+.|+|+. |...+. + +.+ ..+++|++|+|++|.++...+.. +
T Consensus 211 ~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~-----------------l- 272 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM-----------------F- 272 (362)
T ss_dssp HHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH-----------------H-
T ss_pred HHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH-----------------H-
Confidence 3333 688888888863 222221 1 112 24678888888887764211000 0
Q ss_pred hhhcCccccceeeccCccccCC----CchhhCCCCCCcEEEeecCCCCcccCccCCC-CCCCCEEeCcCCc
Q 003926 265 AEVSSYYQLQRLDLSSNRFVGP----FPQALLSLPSITYLNIADNKLTGKLFDDLSC-NPELGFVDLSSNL 330 (786)
Q Consensus 265 ~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~-~~~L~~l~ls~N~ 330 (786)
.....+++|+.|||+.|.|.+. ++..+.++++|+.|+|++|.++...-..+.. + ...++++.|+
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 0012356777888877777653 3333445677888888888776543332221 1 2457777776
No 406
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.78 E-value=4.6e-08 Score=107.09 Aligned_cols=218 Identities=14% Similarity=0.066 Sum_probs=97.3
Q ss_pred CccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCC
Q 003926 124 SGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE 203 (786)
Q Consensus 124 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 203 (786)
...|.++++|+.+.+..+. ...-...|.++.+|+.+.+..| ++..-...|.++..|+.+.+..+... +.+.+....
T Consensus 155 ~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 3456666666666665443 3244455666666666666554 33233445666666666655544322 122223334
Q ss_pred CCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCC--CCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCc
Q 003926 204 NLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG--PQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSN 281 (786)
Q Consensus 204 ~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~--~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 281 (786)
+|+.+.+..+.-.-....|.++..|+.+.+..+... .........+..+....+.+ ....|..+.+|+.+.+.++
T Consensus 231 ~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 231 GVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT
T ss_pred CCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc
Confidence 555555543221111112445555555555444221 11111112222222222221 1123444555555555433
Q ss_pred cccCCCchhhCCCCCCcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcC
Q 003926 282 RFVGPFPQALLSLPSITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYA 351 (786)
Q Consensus 282 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~ 351 (786)
+...-..+|.++.+|+.++|.++ ++..-...|..+.+|+.+++..| ++..-...+..+.++..+.+.
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 33333344555555555555432 43333344555555555555444 332223344444555555443
No 407
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.75 E-value=1.5e-08 Score=109.42 Aligned_cols=147 Identities=13% Similarity=0.201 Sum_probs=105.4
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEec--ccCC-CChHHHHHHHHHHhcCC--CCCcceeeeeeeeccccCCCCceE
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLK--MKKC-HSTRNFMHHIELISKLR--HRHLVSALGHCFECYFDDSSVSRI 555 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~--~~~~-~~~~~f~~E~~~l~~l~--H~NIv~l~g~~~~~~~~~~~~~~~ 555 (786)
..+.++.|.++.||+....+ ..+++|+.. .... .....+.+|+++++.++ +..+.++++++... ...+..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~----~~~g~~ 116 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE----SVIGRA 116 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT----TTTSSC
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC----CccCCe
Confidence 35678999999999998765 577888765 3221 22356888999999987 45577888776542 112347
Q ss_pred EEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC--------------------------------
Q 003926 556 FLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI-------------------------------- 603 (786)
Q Consensus 556 ~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-------------------------------- 603 (786)
|+||||+++..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 117 ~~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 8999999998875421 123678888899999999999999620
Q ss_pred -----------------------CCCccccCCCCCceeecCCCc--ccccCCCcccccc
Q 003926 604 -----------------------VPGVFSNNLKITDILLDQNLV--AKISSYNLPLLAE 637 (786)
Q Consensus 604 -----------------------~~~ivHrdlk~~NILld~~~~--~kl~DfGl~~~~~ 637 (786)
.+.++|+|+++.||+++.+.. +.|.||+.+....
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 246899999999999997753 6899999876543
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.73 E-value=9.4e-08 Score=104.59 Aligned_cols=243 Identities=13% Similarity=0.056 Sum_probs=136.6
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEccccc---------------
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENM--------------- 166 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~--------------- 166 (786)
.+.++++|+.+.|.. .++..-..+|.++++|+.++|..| ++..-...|.++++|+.+.+..+-
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSE
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccc
Confidence 355666677776653 355555566667777777776544 443444556666666555443321
Q ss_pred ------CCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCC-
Q 003926 167 ------LAGRVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG- 239 (786)
Q Consensus 167 ------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~- 239 (786)
....-...|.++++|+.+.+.++. ...-...|.++++|+.+++..|--.-..-.|.++..|+.+.+..+...
T Consensus 144 ~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~~~~I~~~~F~~~~~L~~i~~~~~~~~i 222 (394)
T 4fs7_A 144 ITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNSLYYL 222 (394)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCTTCCBCCCCTTCCEE
T ss_pred cccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCCceEeCchhhccccccceeecCCCceEe
Confidence 111112346666777777776543 223445566667777776665511111112555555555554433211
Q ss_pred CC-----------------------CCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCC
Q 003926 240 PQ-----------------------FPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPS 296 (786)
Q Consensus 240 ~~-----------------------~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 296 (786)
+. ......+|+.+.+..+.. ......|..+..++.+.+..+.+. ...|..+.+
T Consensus 223 ~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~ 298 (394)
T 4fs7_A 223 GDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSS 298 (394)
T ss_dssp CTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTT
T ss_pred ehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcc-eeeccccccccccceeccCceeec---ccccccccc
Confidence 00 001112344444443322 223344556666666666555432 346788999
Q ss_pred CcEEEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 297 ITYLNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 297 L~~L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
|+.+.+.++ ++..-...|..+.+|+.+++.++ ++..-...+..+.++..+.+..|
T Consensus 299 L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 299 LTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 999999765 66555667888999999999754 65433556677788888888655
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.65 E-value=1e-10 Score=119.34 Aligned_cols=79 Identities=23% Similarity=0.282 Sum_probs=43.6
Q ss_pred cCCCCCcEEEcccccCCC--CCCcccCCCCCCCEEEccCCcCcccCCccccCCC--CCCEEEccCCcCCcCCCC------
Q 003926 152 SILTSLQTLILDENMLAG--RVPDWLGSLPILAVLSLRNNMFNGTLPDSFSYLE--NLRVLALSNNHFYGEVPD------ 221 (786)
Q Consensus 152 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------ 221 (786)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345566666666666655 3345555666666666666666543 2233333 666666666666655542
Q ss_pred --CCCCCcCCEEE
Q 003926 222 --FSGLTYLQVLD 232 (786)
Q Consensus 222 --~~~l~~L~~L~ 232 (786)
+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 34455666554
No 410
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.64 E-value=9.1e-09 Score=108.41 Aligned_cols=187 Identities=16% Similarity=0.189 Sum_probs=116.7
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCc--ceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHL--VSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NI--v~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +..+ .+.++.+.. .......|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~----~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP----SETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC----CSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC----CCCCCcceEE
Confidence 4568999999999864 45788876432 23467889999998884 3322 233332211 1111235899
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC------------------------------------
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG------------------------------------ 602 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------------------------------------ 602 (786)
|||++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 95 m~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999999888753321 356666677777777777777741
Q ss_pred -------------------CCCCccccCCCCCceeecC--CCcccccCCCccccccccccccccccc-------------
Q 003926 603 -------------------IVPGVFSNNLKITDILLDQ--NLVAKISSYNLPLLAENAEKVGHVIPY------------- 648 (786)
Q Consensus 603 -------------------~~~~ivHrdlk~~NILld~--~~~~kl~DfGl~~~~~~~~~~~~~~~~------------- 648 (786)
..+.++|+|+++.||++++ +..+.|.||+.+...+...........
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 1245799999999999998 566789999987554322111111000
Q ss_pred --ccccC-ccccccCCCCcccceeehhHHHHHHHhCCCCC
Q 003926 649 --SGSID-PTNSARGKLEEKIDIYDFGLILLEIIVGRPLK 685 (786)
Q Consensus 649 --~~~~a-Pe~~~~~~~t~ksDVwSfGvvl~ElltG~~p~ 685 (786)
.+... |+.... .....+.|++|.++|++.+|++++
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01111 221111 112358899999999999998765
No 411
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.52 E-value=1.7e-06 Score=94.53 Aligned_cols=245 Identities=12% Similarity=0.100 Sum_probs=133.7
Q ss_pred ccCCCCCCCEEEccCCC---CccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCC
Q 003926 102 TLVKLPDLKVLRLVSLG---LWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSL 178 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~---l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 178 (786)
.|.++++|+.+.+..|. +...-..+|.++.+|+.+.+..+ ++..-...|..+.+|+.+.+..+ +.......|..+
T Consensus 82 AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c 159 (394)
T 4gt6_A 82 AFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYC 159 (394)
T ss_dssp TTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred HhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecc
Confidence 34566666666665543 43344455666666666655443 33344455666666666666543 222333456666
Q ss_pred CCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCC------------------
Q 003926 179 PILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGP------------------ 240 (786)
Q Consensus 179 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~------------------ 240 (786)
.+|+.+.+..+ +...-...|.+ .+|+.+.+..+-..-....|.++.+|+......+....
T Consensus 160 ~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T 4gt6_A 160 YSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIR 237 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEE
T ss_pred cccccccccce-eeEeccccccc-cceeEEEECCcccccccchhhhccccceecccccccccccceeecccccccccccc
Confidence 66666666544 33222333432 34555555443322122235555555555443332110
Q ss_pred ----------CCCcc-----------ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcE
Q 003926 241 ----------QFPKV-----------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITY 299 (786)
Q Consensus 241 ----------~~p~~-----------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 299 (786)
.+|.. ..+|+.+.+..+.. ..-...|.++.+|+.+.+. +.+...-...|.++.+|+.
T Consensus 238 ~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~ 315 (394)
T 4gt6_A 238 YPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKS 315 (394)
T ss_dssp CCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCE
T ss_pred cccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCE
Confidence 01111 12344454443322 2334456777888888885 4455455567888888888
Q ss_pred EEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCcc
Q 003926 300 LNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARNC 354 (786)
Q Consensus 300 L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N~ 354 (786)
++|..| ++..-...|..+.+|+.+.+..+ ++..-...+..+.++..+.+.+|.
T Consensus 316 i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 316 IDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred EEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 888754 55455566777888888888654 553334456667788888777653
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.46 E-value=1e-08 Score=104.63 Aligned_cols=103 Identities=24% Similarity=0.191 Sum_probs=76.0
Q ss_pred CCCCCCE--EEccCCC---CccCCCccCCCCCCCCEEeccCCCCCC--CCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 105 KLPDLKV--LRLVSLG---LWGPLSGKISRLSSLEILNMSSNFLNG--AIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 105 ~l~~L~~--L~L~~n~---l~g~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
..+.|+. ++++.|. +.+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..
T Consensus 139 ~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~ 216 (267)
T 3rw6_A 139 SDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDK 216 (267)
T ss_dssp GCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGG
T ss_pred CCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhh
Confidence 3444444 5566663 222222233568899999999999998 5567788999999999999999875 33444
Q ss_pred CC--CCCEEEccCCcCcccCCc-------cccCCCCCCEEE
Q 003926 178 LP--ILAVLSLRNNMFNGTLPD-------SFSYLENLRVLA 209 (786)
Q Consensus 178 l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 209 (786)
+. +|+.|+|++|.+.+.+|+ .+..+++|+.||
T Consensus 217 l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 217 IKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 44 999999999999987773 367889999887
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=4e-08 Score=95.20 Aligned_cols=67 Identities=15% Similarity=0.261 Sum_probs=36.2
Q ss_pred ccCCCCCCCEEEccCC-CCccC----CCccCCCCCCCCEEeccCCCCCCC----CCccccCCCCCcEEEcccccCC
Q 003926 102 TLVKLPDLKVLRLVSL-GLWGP----LSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLA 168 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n-~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 168 (786)
.+...+.|++|+|++| .+... +...+...++|+.|+|++|.|... +...+...++|++|+|++|.+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 3456667777777776 66432 334445556666666666666431 2223334455555555555554
No 414
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.34 E-value=1.7e-05 Score=86.56 Aligned_cols=245 Identities=12% Similarity=0.088 Sum_probs=167.4
Q ss_pred ccCCC-CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCC---CCCCCCccccCCCCCcEEEcccccCCCCCCcccCC
Q 003926 102 TLVKL-PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF---LNGAIPQELSILTSLQTLILDENMLAGRVPDWLGS 177 (786)
Q Consensus 102 ~l~~l-~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 177 (786)
.+.++ ..|+.+.+.. .++.+-..+|.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++..-...|..
T Consensus 58 aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 35566 4699999975 4777778899999999999998875 55555678999999999888765 44445568899
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCC--CCCCccccchhhhhcc
Q 003926 178 LPILAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALG--PQFPKVGKKLVTMILS 255 (786)
Q Consensus 178 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~--~~~p~~~~~L~~L~ls 255 (786)
+.+|+.+.+..+ +.......|.++.+|+.+.+..+--+-....|. ...|+.+.+..+... ........++......
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~-~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~ 213 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDSVTAIEERAFT-GTALTQIHIPAKVTRIGTNAFSECFALSTITSD 213 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTTCCEECTTTTT-TCCCSEEEECTTCCEECTTTTTTCTTCCEEEEC
T ss_pred hcccccccccce-eeeecccceecccccccccccceeeEecccccc-ccceeEEEECCcccccccchhhhccccceeccc
Confidence 999999999765 444556678999999999997663221122354 367888888655321 0000000111111000
Q ss_pred ------------------------------------CCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcE
Q 003926 256 ------------------------------------KNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITY 299 (786)
Q Consensus 256 ------------------------------------~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 299 (786)
.+.++..-...|.++..|+.+.+.++... .-...|.++++|+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~ 292 (394)
T 4gt6_A 214 SESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQD 292 (394)
T ss_dssp CSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCE
T ss_pred ccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCccccccccccc
Confidence 01122222345778899999999766543 55678899999999
Q ss_pred EEeecCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCCc
Q 003926 300 LNIADNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYARN 353 (786)
Q Consensus 300 L~l~~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~N 353 (786)
+.+. +.++......|..+.+|+.+++..| ++..-...+..+.++..+.+..+
T Consensus 293 i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 293 IEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp EECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred ccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 9996 5566566677888999999999865 55344556777788998888654
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.29 E-value=3.6e-06 Score=87.42 Aligned_cols=76 Identities=18% Similarity=0.134 Sum_probs=60.4
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC---CcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR---HLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.+.||.|.++.||+++..+|..++||+...........|.+|++.|+.++|. .+.+++++. ..++|
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~-----------~~~lv 88 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----------DRTLA 88 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----------TTEEE
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec-----------CcEEE
Confidence 5679999999999999888999999986544333456799999999999876 466666542 14899
Q ss_pred EecCCCCChh
Q 003926 559 FEYVPNGTLR 568 (786)
Q Consensus 559 ~Ey~~~GsL~ 568 (786)
|||++++++.
T Consensus 89 me~l~g~~~~ 98 (288)
T 3d1u_A 89 MEWVDERPPT 98 (288)
T ss_dssp EECCCCCCCC
T ss_pred EEecccCCCC
Confidence 9999998753
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.23 E-value=9.5e-08 Score=92.56 Aligned_cols=118 Identities=15% Similarity=0.133 Sum_probs=84.0
Q ss_pred CCCccCCCCCCCCEEeccCC-CCCCC----CCccccCCCCCcEEEcccccCCCC----CCcccCCCCCCCEEEccCCcCc
Q 003926 122 PLSGKISRLSSLEILNMSSN-FLNGA----IPQELSILTSLQTLILDENMLAGR----VPDWLGSLPILAVLSLRNNMFN 192 (786)
Q Consensus 122 ~~~~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 192 (786)
.+...+...++|+.|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34456778899999999999 88642 345567788899999999988632 3345556678889999998887
Q ss_pred cc----CCccccCCCCCCEEEc--cCCcCCcCC-----CCCCCCCcCCEEEcccCCCC
Q 003926 193 GT----LPDSFSYLENLRVLAL--SNNHFYGEV-----PDFSGLTYLQVLDLENNALG 239 (786)
Q Consensus 193 ~~----~p~~~~~l~~L~~L~L--s~N~l~~~~-----p~~~~l~~L~~L~L~~N~l~ 239 (786)
.. +...+...++|+.|+| ++|.+...- ..+...++|+.|+|++|.++
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 43 3455667778888888 778876421 11445577888888877663
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.18 E-value=4.9e-06 Score=88.02 Aligned_cols=138 Identities=12% Similarity=0.179 Sum_probs=96.3
Q ss_pred CCCccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCC---C-CcceeeeeeeeccccCCCCc
Q 003926 478 NFDTSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRH---R-HLVSALGHCFECYFDDSSVS 553 (786)
Q Consensus 478 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H---~-NIv~l~g~~~~~~~~~~~~~ 553 (786)
.....+.++.|....||+. |..+++|+..... ....+.+|+++++.+++ + .+.+++++ +
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-----------~ 100 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ-----------S 100 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----------C
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec-----------C
Confidence 4455678999999999998 5678888764321 23568899999988876 1 22333332 1
Q ss_pred eEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCC------------------------------
Q 003926 554 RIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGI------------------------------ 603 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~------------------------------ 603 (786)
..++||||+++.++.+.... .++..++..++.++++.++.||+..
T Consensus 101 ~~~lvme~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (320)
T 3r70_A 101 DRFNIMKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISIL 175 (320)
T ss_dssp SSCEEEECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHH
Confidence 25899999999888643321 2455566666777777777777421
Q ss_pred ------------------------------CCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 604 ------------------------------VPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 604 ------------------------------~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
.+.++|+|+++.||+++.+..+.|.||+.+....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 176 EKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred hhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1245999999999999997777999999875443
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.10 E-value=9e-05 Score=80.16 Aligned_cols=239 Identities=11% Similarity=-0.024 Sum_probs=115.3
Q ss_pred ccCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCC
Q 003926 102 TLVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPIL 181 (786)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 181 (786)
.+.++.+|+.++|.. .++..-..+|.++ +|+.+.+..+ ++..-...|.++ +|+.+.+..+- ...-...|.+. +|
T Consensus 64 aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~~-~~i~~~~F~~~-~l 137 (379)
T 4h09_A 64 NFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPGAT-TEIGNYIFYNS-SV 137 (379)
T ss_dssp TTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECCTTC-CEECTTTTTTC-CC
T ss_pred HhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCCCcc-ccccccccccc-ee
Confidence 456777777777764 3555556667665 5666666543 443334445443 67777776542 21222334333 45
Q ss_pred CEEEccCCcCcccCCccccCCCCCCEEEccCCcCCcC------------------------------------CCCCCCC
Q 003926 182 AVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGE------------------------------------VPDFSGL 225 (786)
Q Consensus 182 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------------------------------------~p~~~~l 225 (786)
+.+.+..+ ++..-...|.++.+|+.+.+..+..... ...+...
T Consensus 138 ~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~ 216 (379)
T 4h09_A 138 KRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYG 216 (379)
T ss_dssp CEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTC
T ss_pred eeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccc
Confidence 55544433 3333444566667777666654332110 0012333
Q ss_pred CcCCEEEcccCCC--CCCCCccccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEee
Q 003926 226 TYLQVLDLENNAL--GPQFPKVGKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIA 303 (786)
Q Consensus 226 ~~L~~L~L~~N~l--~~~~p~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 303 (786)
.+|+.+.+..+-- ..........|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|+.+.+.
T Consensus 217 ~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 217 KNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred cccceeeeccceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 4444444433210 0000011234444444433 33333444555666666666433 333333456666666666666
Q ss_pred cCCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEc
Q 003926 304 DNKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLY 350 (786)
Q Consensus 304 ~N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~ 350 (786)
+|.++..-...|..+.+|+.++|..+ ++..-...+..+.++..+.+
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 66665544555666666666666543 33222223444444444433
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.93 E-value=2.6e-05 Score=81.84 Aligned_cols=137 Identities=15% Similarity=0.066 Sum_probs=86.1
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC---CcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR---HLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.+.++.|....||+. |..+++|+.... .....+.+|+++|+.+++. .+.+.+.++.. ..+..++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~------~~g~~~~v 91 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR------SDGNPFVG 91 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC------TTSCEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc------CCCceEEE
Confidence 356788888899988 566788875321 2245788999999999753 23444444321 13446899
Q ss_pred EecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcC------------------------------------
Q 003926 559 FEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTG------------------------------------ 602 (786)
Q Consensus 559 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------------------------------------ 602 (786)
|||++|.++.+.... .++..++..++.++++.|+.||+.
T Consensus 92 ~e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~ 166 (306)
T 3tdw_A 92 YRKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDE 166 (306)
T ss_dssp EECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCH
T ss_pred EeccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccch
Confidence 999999888653211 122233333333333333333321
Q ss_pred ---------------------CCCCccccCCCCCceeecC---CCc-ccccCCCcccc
Q 003926 603 ---------------------IVPGVFSNNLKITDILLDQ---NLV-AKISSYNLPLL 635 (786)
Q Consensus 603 ---------------------~~~~ivHrdlk~~NILld~---~~~-~kl~DfGl~~~ 635 (786)
..+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 167 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 167 SLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999997 344 57999997643
No 420
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.87 E-value=0.00055 Score=73.90 Aligned_cols=240 Identities=11% Similarity=0.033 Sum_probs=145.9
Q ss_pred cCCCCCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCC
Q 003926 103 LVKLPDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILA 182 (786)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 182 (786)
+....+|+.+.+.. +++.+-..+|.++++|+.++|..+ ++.+-..+|.++ +|+.+.+..+ +...-...|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 44567788888864 577777889999999999999755 666667788887 6888877654 44333445655 4899
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEEccCCcCCcCCCCCCCCCcCCEEEcccCCCCCC---------------------
Q 003926 183 VLSLRNNMFNGTLPDSFSYLENLRVLALSNNHFYGEVPDFSGLTYLQVLDLENNALGPQ--------------------- 241 (786)
Q Consensus 183 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~--------------------- 241 (786)
.+.+..+. ...-...|.+. +|+.+.+..+--.-....|....+|+.+.+..+.....
T Consensus 117 ~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 117 DFEFPGAT-TEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EEECCTTC-CEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred cccCCCcc-ccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 99998753 33334456554 57777665542222223477778888877765543110
Q ss_pred ------CCcc-----------ccchhhhhccCCccCCcChhhhcCccccceeeccCccccCCCchhhCCCCCCcEEEeec
Q 003926 242 ------FPKV-----------GKKLVTMILSKNKFRSAIPAEVSSYYQLQRLDLSSNRFVGPFPQALLSLPSITYLNIAD 304 (786)
Q Consensus 242 ------~p~~-----------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 304 (786)
+|.. ..+|..+.+..+ +...-...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..
T Consensus 195 ~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~ 272 (379)
T 4h09_A 195 TGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA 272 (379)
T ss_dssp CCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC
T ss_pred cccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc
Confidence 0000 012222222221 22223344556667777777654 4444455667777777777754
Q ss_pred CCCCcccCccCCCCCCCCEEeCcCCcCCccCChhhhcCCCCcEEEcCC
Q 003926 305 NKLTGKLFDDLSCNPELGFVDLSSNLLTGQLPNCLLAGSKNRVVLYAR 352 (786)
Q Consensus 305 N~l~g~~~~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~ 352 (786)
+ ++......|..+.+|+.+++.++.++..-..++..+.++..+.+..
T Consensus 273 ~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 273 K-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp C-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred c-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 3 4444445566777777777777777644445566666677666643
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.77 E-value=7.2e-05 Score=76.75 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=86.1
Q ss_pred ccCCCCCc-eeEEEEec-CCcEEEEEEecccCCCChHHHHHHHHHHhcCC-CCCcceeeeeeeeccccCCCCceEEEEEe
Q 003926 484 FMGEGSQG-QMYRGRLK-NGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-HRHLVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 484 ~iG~G~fg-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~NIv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
.+..|..| .||+.... ++..+.+|+-... ....+.+|+..|+.+. +--+-++++++.. .+..++|||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-------~~~~~lvme 100 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-------PDDAWLLTT 100 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-------TTEEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-------CCeEEEEEE
Confidence 34455555 69998754 4667888875432 2456888999998874 2234556666654 345799999
Q ss_pred cCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhc---------------------------------------
Q 003926 561 YVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHT--------------------------------------- 601 (786)
Q Consensus 561 y~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~--------------------------------------- 601 (786)
|+++.++.+..... ...+..++.++++.|+-||.
T Consensus 101 ~l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNG 173 (272)
T ss_dssp CCCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTT
T ss_pred eeCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccc
Confidence 99998876654321 01122233344444444442
Q ss_pred ------------C----CCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 602 ------------G----IVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 602 ------------~----~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
. ..+.++|+|+.+.||+++++..+-|.||+.+.
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 174 WPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1 11237899999999999988777799998754
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.68 E-value=6.1e-05 Score=80.79 Aligned_cols=82 Identities=11% Similarity=0.042 Sum_probs=53.5
Q ss_pred Ccc-CCCCCceeEEEEec-------CCcEEEEEEecccC---CCChHHHHHHHHHHhcCCC---CCcceeeeeeeecccc
Q 003926 483 AFM-GEGSQGQMYRGRLK-------NGTFVAIRCLKMKK---CHSTRNFMHHIELISKLRH---RHLVSALGHCFECYFD 548 (786)
Q Consensus 483 ~~i-G~G~fg~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H---~NIv~l~g~~~~~~~~ 548 (786)
+.| +.|....+|+.... ++..+++|+..... ......+.+|+.+++.++. -.+.++++++....
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~-- 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD-- 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST--
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC--
Confidence 567 88888999998764 26678888765432 1122457788888888743 24556666654311
Q ss_pred CCCCceEEEEEecCCCCChh
Q 003926 549 DSSVSRIFLIFEYVPNGTLR 568 (786)
Q Consensus 549 ~~~~~~~~LV~Ey~~~GsL~ 568 (786)
..+..++||||+++..+.
T Consensus 104 --~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 --VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp --TTSSCEEEEECCCCBCCC
T ss_pred --ccCCceEEEEecCCCChh
Confidence 113468999999987654
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.68 E-value=8.4e-05 Score=79.83 Aligned_cols=145 Identities=14% Similarity=0.177 Sum_probs=87.7
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCC--cceeeeeeeeccccCCCCceEEEE
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH--LVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N--Iv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
..+.++.|....+|+... +|..+++|..... ..+.+|+.+++.+.... +.++++++.. ..+..|+|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~------~~g~~~lv 112 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF------SESLTYCI 112 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES------SSSCEEEE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC------CCCCeEEE
Confidence 456788999999999886 4778889876432 36889999998886543 3445554432 11457999
Q ss_pred EecCCCCChhHH------------------hhcCCCCC--------------CCCHHHHH--------------------
Q 003926 559 FEYVPNGTLRSW------------------ISEGHAHQ--------------SLTWTQRI-------------------- 586 (786)
Q Consensus 559 ~Ey~~~GsL~~~------------------l~~~~~~~--------------~l~~~~~~-------------------- 586 (786)
|||+++.++.+. ||...... .-+|...+
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999997655321 12110000 00121110
Q ss_pred -HHHHHHHHHhhhhhcC-CCCCccccCCCCCceeecCCCcccccCCCcccccc
Q 003926 587 -SAAIGVAKGIQFLHTG-IVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAE 637 (786)
Q Consensus 587 -~ia~~ia~gL~yLH~~-~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~ 637 (786)
.....+.+-+.++... ..+.++|+|+.+.||+++++..+.|.||+.+...+
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 1111111122223211 12578999999999999988778899999875543
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.46 E-value=0.00046 Score=75.09 Aligned_cols=75 Identities=9% Similarity=0.022 Sum_probs=48.5
Q ss_pred cCccCCCCCceeEEEEec-CCcEEEEEEecccCC-------CChHHHHHHHHHHhcCCC--CCcc-eeeeeeeeccccCC
Q 003926 482 SAFMGEGSQGQMYRGRLK-NGTFVAIRCLKMKKC-------HSTRNFMHHIELISKLRH--RHLV-SALGHCFECYFDDS 550 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~NIv-~l~g~~~~~~~~~~ 550 (786)
.+.||.|.++.||+++.. ++..|+||....... .....+..|+++++.+++ +..+ +++.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------- 106 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------- 106 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--------
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--------
Confidence 467999999999999854 468899998653211 123457789998887743 3444 444321
Q ss_pred CCceEEEEEecCCCC
Q 003926 551 SVSRIFLIFEYVPNG 565 (786)
Q Consensus 551 ~~~~~~LV~Ey~~~G 565 (786)
.+..++||||+++.
T Consensus 107 -~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 107 -TEMAVTVMEDLSHL 120 (397)
T ss_dssp -TTTTEEEECCCTTS
T ss_pred -CCccEEEEEeCCCc
Confidence 12358999999864
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.45 E-value=0.00031 Score=72.74 Aligned_cols=76 Identities=18% Similarity=0.137 Sum_probs=55.3
Q ss_pred ccCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCC---CcceeeeeeeeccccCCCCceEEE
Q 003926 481 TSAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHR---HLVSALGHCFECYFDDSSVSRIFL 557 (786)
Q Consensus 481 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---NIv~l~g~~~~~~~~~~~~~~~~L 557 (786)
..+.+|.|..+.||+.+..+|+.|.||+...........|.+|++.|+.+.-. -+.+++++. .-++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~-----------~~~l 87 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----------DRTL 87 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----------TTEE
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc-----------CceE
Confidence 35678999999999999999999999987654434445688999998887432 233333321 1379
Q ss_pred EEecCCCCCh
Q 003926 558 IFEYVPNGTL 567 (786)
Q Consensus 558 V~Ey~~~GsL 567 (786)
||||++.+..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999987654
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.28 E-value=6.2e-05 Score=71.08 Aligned_cols=33 Identities=6% Similarity=0.084 Sum_probs=12.9
Q ss_pred CCEEeccCCCCCCCCCccccCCCCCcEEEcccc
Q 003926 133 LEILNMSSNFLNGAIPQELSILTSLQTLILDEN 165 (786)
Q Consensus 133 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 165 (786)
|+.|||+++.++..--..+..+++|+.|+|++|
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 444444444433222222334444444444444
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.25 E-value=0.00075 Score=71.54 Aligned_cols=140 Identities=9% Similarity=0.109 Sum_probs=77.6
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC-----CCCcceee-e-eeeeccccCCCCceE
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR-----HRHLVSAL-G-HCFECYFDDSSVSRI 555 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H~NIv~l~-g-~~~~~~~~~~~~~~~ 555 (786)
+.|+.|..+.||+....+| .+++|+.... ......|+.+++.++ .|.++.-. | .+.. ..+..
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~------~~~~~ 106 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSK------HGSFL 106 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEE------ETTEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEE------ECCEE
Confidence 4566678899999987655 4888988642 233445555555443 34433311 1 0000 13457
Q ss_pred EEEEecCCCCChh--------------HHhhc--CCC--C-------CCCCHHHHHH-----------------------
Q 003926 556 FLIFEYVPNGTLR--------------SWISE--GHA--H-------QSLTWTQRIS----------------------- 587 (786)
Q Consensus 556 ~LV~Ey~~~GsL~--------------~~l~~--~~~--~-------~~l~~~~~~~----------------------- 587 (786)
++||||+++..+. ..+|. ... . ..-.|.....
T Consensus 107 ~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (346)
T 2q83_A 107 FVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQ 186 (346)
T ss_dssp EEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHH
T ss_pred EEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHH
Confidence 8999999986542 11221 000 0 0123432110
Q ss_pred --------HHHHHHHHhhhhhc----------CCCCCccccCCCCCceeecCCCcccccCCCcc
Q 003926 588 --------AAIGVAKGIQFLHT----------GIVPGVFSNNLKITDILLDQNLVAKISSYNLP 633 (786)
Q Consensus 588 --------ia~~ia~gL~yLH~----------~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~ 633 (786)
+...+.+++.+|+. ...+.++|+|+.+.||+++.+..+.|.||+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 187 LYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 11123345666653 12458999999999999988888999999865
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.24 E-value=7.2e-05 Score=70.66 Aligned_cols=83 Identities=12% Similarity=0.051 Sum_probs=52.4
Q ss_pred CCCCEEEccCCCCccCCCccCCCCCCCCEEeccCCC-CCCCCCccccCC----CCCcEEEccccc-CCCCCCcccCCCCC
Q 003926 107 PDLKVLRLVSLGLWGPLSGKISRLSSLEILNMSSNF-LNGAIPQELSIL----TSLQTLILDENM-LAGRVPDWLGSLPI 180 (786)
Q Consensus 107 ~~L~~L~L~~n~l~g~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 180 (786)
-+|+.|||+++.++..--..+.++++|+.|+|++|. ++..-=..++.+ ++|+.|+|++|. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 367888888888765544557788889999998885 553322334443 357777777764 54322233455666
Q ss_pred CCEEEccCC
Q 003926 181 LAVLSLRNN 189 (786)
Q Consensus 181 L~~L~Ls~N 189 (786)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666655
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.96 E-value=0.0058 Score=63.75 Aligned_cols=138 Identities=10% Similarity=0.114 Sum_probs=88.5
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCC---CCCcceeeeeeeeccccCCCCceEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLR---HRHLVSALGHCFECYFDDSSVSRIFLI 558 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~NIv~l~g~~~~~~~~~~~~~~~~LV 558 (786)
.+.|+.|.+..+|+.... +..+++|+.... ....|.+|++.|+.+. ...+.++++++.. .+..++|
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-------~g~~~lv 109 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-------QGHSFLL 109 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-------SSEEEEE
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-------CCceEEE
Confidence 467899999999999864 567888876533 2567889999888874 2456777766542 2457999
Q ss_pred EecCCCCChhH-----------HhhcCCCCC-------------------CCCHHHHH-----HHHHHHH----------
Q 003926 559 FEYVPNGTLRS-----------WISEGHAHQ-------------------SLTWTQRI-----SAAIGVA---------- 593 (786)
Q Consensus 559 ~Ey~~~GsL~~-----------~l~~~~~~~-------------------~l~~~~~~-----~ia~~ia---------- 593 (786)
|||+++..+.. .||...... .-+|.... .-..+.+
T Consensus 110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~ 189 (312)
T 3jr1_A 110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI 189 (312)
T ss_dssp EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999886521 223221100 12565322 1111111
Q ss_pred ----H-Hhhhhh-cCCCCCccccCCCCCceeecCCCcccccCCC
Q 003926 594 ----K-GIQFLH-TGIVPGVFSNNLKITDILLDQNLVAKISSYN 631 (786)
Q Consensus 594 ----~-gL~yLH-~~~~~~ivHrdlk~~NILld~~~~~kl~DfG 631 (786)
. -...|. ....|.++|+|+.+.|++++.++ +-|.|+.
T Consensus 190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 112332 23457899999999999999887 7788874
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.59 E-value=0.0042 Score=65.17 Aligned_cols=165 Identities=11% Similarity=0.160 Sum_probs=87.6
Q ss_pred ccCHHHHHHHhcCCCc-----cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc--cee
Q 003926 466 TFSLEELEEATNNFDT-----SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL--VSA 538 (786)
Q Consensus 466 ~~~~~~l~~~~~~f~~-----~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI--v~l 538 (786)
.++.+++......|.. .+.|+.|....+|+....+| .+++|...... ....+..|+.+++.++...+ .++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 3555666666655654 24567788889999987766 57788876521 23455677777776643222 222
Q ss_pred eeeeeeccccCCCCceEEEEEecCCCCChhH--------------HhhcC--C-CCC---C---CCHHHHHHHH------
Q 003926 539 LGHCFECYFDDSSVSRIFLIFEYVPNGTLRS--------------WISEG--H-AHQ---S---LTWTQRISAA------ 589 (786)
Q Consensus 539 ~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~--------------~l~~~--~-~~~---~---l~~~~~~~ia------ 589 (786)
+... ++.......+..+++|||+++..+.. .+|.. . ... . ..|.....-.
T Consensus 83 ~~~~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 83 LPRK-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp CCBT-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred cCCC-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 2110 00000000245689999999865421 12210 0 000 0 1243321110
Q ss_pred ------HHHHHHhhhhhc----CCCCCccccCCCCCceeecCCCcccccCCCccc
Q 003926 590 ------IGVAKGIQFLHT----GIVPGVFSNNLKITDILLDQNLVAKISSYNLPL 634 (786)
Q Consensus 590 ------~~ia~gL~yLH~----~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~ 634 (786)
..+.+.+++++. ...+.++|+|+.+.||+++++..+.|.||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 113334444442 223478999999999999987666899998753
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.49 E-value=0.0077 Score=65.87 Aligned_cols=76 Identities=9% Similarity=0.070 Sum_probs=44.4
Q ss_pred CCccccCCCCCceeecCCCcccccCCCcccccccccccccccc--cccccCccccccC---CCCcccceeehhHHHHHHH
Q 003926 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIP--YSGSIDPTNSARG---KLEEKIDIYDFGLILLEII 679 (786)
Q Consensus 605 ~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~--~~~~~aPe~~~~~---~~t~ksDVwSfGvvl~Ell 679 (786)
+.++|+|+++.||+++.+. +++.||+.+.............. ...|.+|+..... .-....++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999876 89999998765432221111110 0122333322110 1112344557777888877
Q ss_pred hC
Q 003926 680 VG 681 (786)
Q Consensus 680 tG 681 (786)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.46 E-value=0.00061 Score=65.52 Aligned_cols=66 Identities=15% Similarity=0.211 Sum_probs=32.6
Q ss_pred cCCCCCCCEEEccCC-CCccC----CCccCCCCCCCCEEeccCCCCCCC----CCccccCCCCCcEEEcccccCC
Q 003926 103 LVKLPDLKVLRLVSL-GLWGP----LSGKISRLSSLEILNMSSNFLNGA----IPQELSILTSLQTLILDENMLA 168 (786)
Q Consensus 103 l~~l~~L~~L~L~~n-~l~g~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 168 (786)
+.+-+.|+.|+|++| ++... +...+..-+.|+.|+|++|.|... +...+..-+.|+.|+|+.|.|.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 344566666777664 54321 233444455666666666665421 2222333344555555555543
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.30 E-value=0.036 Score=58.01 Aligned_cols=81 Identities=6% Similarity=0.119 Sum_probs=50.0
Q ss_pred CccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCC--cceeeeeeeeccccCCCCceEEEEEe
Q 003926 483 AFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRH--LVSALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~N--Iv~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
..++ |....||+....+|+.+++|...... .....+..|..+++.++... +.+++.. .+.......+..++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEEEEE
Confidence 3466 88889999887778789999886332 23556777888887774322 3344432 11000001245688999
Q ss_pred cCCCCCh
Q 003926 561 YVPNGTL 567 (786)
Q Consensus 561 y~~~GsL 567 (786)
|+++..+
T Consensus 108 ~i~G~~~ 114 (328)
T 1zyl_A 108 SVGGRQF 114 (328)
T ss_dssp CCCCEEC
T ss_pred ecCCCCC
Confidence 9987543
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.26 E-value=0.00075 Score=64.90 Aligned_cols=114 Identities=11% Similarity=0.131 Sum_probs=70.8
Q ss_pred ccCCCCCCCCEEeccCC-CCCC----CCCccccCCCCCcEEEcccccCCC----CCCcccCCCCCCCEEEccCCcCccc-
Q 003926 125 GKISRLSSLEILNMSSN-FLNG----AIPQELSILTSLQTLILDENMLAG----RVPDWLGSLPILAVLSLRNNMFNGT- 194 (786)
Q Consensus 125 ~~~~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~- 194 (786)
..+.+-+.|+.|+|++| .|.. .+...+..-+.|+.|+|++|++.. .+.+.+..-+.|+.|+|++|.|...
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34556678999999985 7652 234556667888888888888862 2334455567788888888887632
Q ss_pred ---CCccccCCCCCCEEEccCCc---CCcC----CC-CCCCCCcCCEEEcccCCC
Q 003926 195 ---LPDSFSYLENLRVLALSNNH---FYGE----VP-DFSGLTYLQVLDLENNAL 238 (786)
Q Consensus 195 ---~p~~~~~l~~L~~L~Ls~N~---l~~~----~p-~~~~l~~L~~L~L~~N~l 238 (786)
+-..+..-+.|+.|+|++|. +... +- .+..-+.|+.|+++.|.+
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 22334444568888887652 2211 00 133446677777766543
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.25 E-value=0.0071 Score=54.13 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=14.0
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCEEEccCCcC
Q 003926 181 LAVLSLRNNMFNGTLPDSFSYLENLRVLALSNNHF 215 (786)
Q Consensus 181 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 215 (786)
|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 33344444444333333334444444444444433
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.15 E-value=0.0045 Score=55.46 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=23.3
Q ss_pred ccceeeccCccccCCCchhhCCCCCCcEEEeecCCCC
Q 003926 272 QLQRLDLSSNRFVGPFPQALLSLPSITYLNIADNKLT 308 (786)
Q Consensus 272 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 308 (786)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666666666555555666666666666666553
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.89 E-value=0.011 Score=64.64 Aligned_cols=72 Identities=19% Similarity=0.262 Sum_probs=48.6
Q ss_pred CccCCCCCceeEEEEecC--------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc-ceeeeeeeeccccCCCCc
Q 003926 483 AFMGEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVS 553 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI-v~l~g~~~~~~~~~~~~~ 553 (786)
+.|+.|-...||+....+ +..+.+|+.... .....+.+|..+++.+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~---------~ 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS---------G 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET---------T
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC---------C
Confidence 567888889999998753 478888887432 122567789999888854444 45555431 1
Q ss_pred eEEEEEecCCCCCh
Q 003926 554 RIFLIFEYVPNGTL 567 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL 567 (786)
.+||||+++.++
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986443
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=95.67 E-value=0.018 Score=59.71 Aligned_cols=71 Identities=10% Similarity=-0.011 Sum_probs=41.9
Q ss_pred cCccCCCCCceeEEEEecCCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcc-eeeeeeeeccccCCCCceEEEEEe
Q 003926 482 SAFMGEGSQGQMYRGRLKNGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV-SALGHCFECYFDDSSVSRIFLIFE 560 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv-~l~g~~~~~~~~~~~~~~~~LV~E 560 (786)
.+.|+.|....+|+. ..+++|+....... .....+|+.+++.+....+. ++++++. +.-++|+|
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~---------~~~~~v~e 87 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP---------ATGVMVTR 87 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT---------TTCCEEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC---------CCCEEEEe
Confidence 577888999999999 45778876543211 11234677777766433333 4444321 12378999
Q ss_pred cC-CCCCh
Q 003926 561 YV-PNGTL 567 (786)
Q Consensus 561 y~-~~GsL 567 (786)
|+ ++.++
T Consensus 88 ~i~~g~~l 95 (301)
T 3dxq_A 88 YIAGAQTM 95 (301)
T ss_dssp CCTTCEEC
T ss_pred ecCCCccC
Confidence 99 55444
No 439
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.50 E-value=0.075 Score=55.74 Aligned_cols=33 Identities=6% Similarity=0.031 Sum_probs=27.1
Q ss_pred CCCccccCCCCCceeecCC----CcccccCCCccccc
Q 003926 604 VPGVFSNNLKITDILLDQN----LVAKISSYNLPLLA 636 (786)
Q Consensus 604 ~~~ivHrdlk~~NILld~~----~~~kl~DfGl~~~~ 636 (786)
.+.++|+|+.+.||+++.+ ..+.|.||+.+...
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 3579999999999999874 67889999986543
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.05 E-value=0.057 Score=59.41 Aligned_cols=74 Identities=12% Similarity=0.017 Sum_probs=46.1
Q ss_pred cCccCCCCCceeEEEEecC-CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcc-eeeeeeeeccccCCCCceEEEEE
Q 003926 482 SAFMGEGSQGQMYRGRLKN-GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV-SALGHCFECYFDDSSVSRIFLIF 559 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv-~l~g~~~~~~~~~~~~~~~~LV~ 559 (786)
.+.|+.|-...+|+....+ +..+++|+....... .-.-.+|..+++.+...+++ ++++++. + .+||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~---------~--G~v~ 180 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT---------N--GRIE 180 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET---------T--EEEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC---------C--eEEE
Confidence 3567888889999998765 477888876432211 11125788888888655554 5555431 1 2599
Q ss_pred ecCCCCCh
Q 003926 560 EYVPNGTL 567 (786)
Q Consensus 560 Ey~~~GsL 567 (786)
||+++.+|
T Consensus 181 e~I~G~~l 188 (458)
T 2qg7_A 181 EFMDGYAL 188 (458)
T ss_dssp ECCCSEEC
T ss_pred EeeCCccC
Confidence 99987544
No 441
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.85 E-value=0.034 Score=38.42 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=19.8
Q ss_pred chhhhhhHhhhHHHHHHHHHHHHHHHhhhcccc
Q 003926 388 SKAVLALSIIGGIIGGISLVVIAFLLVRRTKSK 420 (786)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (786)
....++.++++++++++++++..++++|||+.+
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 344566777777766665555556666655443
No 442
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.60 E-value=0.03 Score=38.81 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=19.5
Q ss_pred chhhhhhHhhhHHHHHHHHHHHHHHHhhhccc
Q 003926 388 SKAVLALSIIGGIIGGISLVVIAFLLVRRTKS 419 (786)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (786)
....+++++++++++++++++..++++||++.
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34456677777776666555555666665543
No 443
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=94.47 E-value=0.1 Score=55.88 Aligned_cols=140 Identities=12% Similarity=0.097 Sum_probs=78.0
Q ss_pred CccCCCCCceeEEEEec--------CCcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc-ceeeeeeeeccccCCCCc
Q 003926 483 AFMGEGSQGQMYRGRLK--------NGTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVS 553 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI-v~l~g~~~~~~~~~~~~~ 553 (786)
+.+..|-...+|+.... ++..+.+|+... .........+|.++++.+.-..+ .++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~---------~ 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFP---------E 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET---------T
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC---------C
Confidence 45667888889999874 246888887532 22345667789999988753333 44554432 1
Q ss_pred eEEEEEecCCCCChhH-----------------HhhcCCC--CCCCC--HHHHHHHHHHHHH------------------
Q 003926 554 RIFLIFEYVPNGTLRS-----------------WISEGHA--HQSLT--WTQRISAAIGVAK------------------ 594 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL~~-----------------~l~~~~~--~~~l~--~~~~~~ia~~ia~------------------ 594 (786)
.+||||+++..|.. .||.... ..... |.+..+...++..
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 28999999765531 1122111 11122 3333333322211
Q ss_pred -Hhhhhh----c-CCCCCccccCCCCCceeecCC----CcccccCCCccc
Q 003926 595 -GIQFLH----T-GIVPGVFSNNLKITDILLDQN----LVAKISSYNLPL 634 (786)
Q Consensus 595 -gL~yLH----~-~~~~~ivHrdlk~~NILld~~----~~~kl~DfGl~~ 634 (786)
.+..|. . .....++|+|+.+.||+++.+ ..+.+.||..+.
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 122222 1 123468999999999999876 678899998754
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=94.42 E-value=0.039 Score=58.93 Aligned_cols=73 Identities=18% Similarity=0.115 Sum_probs=42.3
Q ss_pred CccCCCCCceeEEEEecC---------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCcc-eeeeeeeeccccCCCC
Q 003926 483 AFMGEGSQGQMYRGRLKN---------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHLV-SALGHCFECYFDDSSV 552 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NIv-~l~g~~~~~~~~~~~~ 552 (786)
..++.|....+|+....+ +..+++|+...... ...+...|.++++.+...+++ ++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~---------~ 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF---------N 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec---------C
Confidence 467788888999998654 26788887653221 111235788888877533443 555422 1
Q ss_pred ceEEEEEecCCCCCh
Q 003926 553 SRIFLIFEYVPNGTL 567 (786)
Q Consensus 553 ~~~~LV~Ey~~~GsL 567 (786)
-++||||+++..+
T Consensus 109 --~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 --GGRIEEWLYGDPL 121 (369)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CcEEEEEecCCcC
Confidence 2689999987543
No 445
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=93.93 E-value=0.093 Score=55.32 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=27.3
Q ss_pred CCccccCCCCCceeecCCCcccccCCCccccc
Q 003926 605 PGVFSNNLKITDILLDQNLVAKISSYNLPLLA 636 (786)
Q Consensus 605 ~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~ 636 (786)
..++|+|+.+.||++++++.+.+.||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47899999999999998888899999876443
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=90.76 E-value=0.47 Score=45.85 Aligned_cols=98 Identities=9% Similarity=0.008 Sum_probs=61.5
Q ss_pred CChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhh-hcCCCCCccccCCCCCceeecCCCcccccCCCcccccccccccc
Q 003926 565 GTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFL-HTGIVPGVFSNNLKITDILLDQNLVAKISSYNLPLLAENAEKVG 643 (786)
Q Consensus 565 GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~~ivHrdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~ 643 (786)
-||.++|... ..+++..+.+.++.|.+++|.-+ +... + ..+=+-+..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~--~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQ-P--RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhccc-C--CceecCCcceEEecCCceeccc-cccc---------
Confidence 3788888753 35799999999999999998765 2110 1 1223446788898888876653 1110
Q ss_pred cccccccccCccccccCCCCcccceeehhHHHHHHHh
Q 003926 644 HVIPYSGSIDPTNSARGKLEEKIDIYDFGLILLEIIV 680 (786)
Q Consensus 644 ~~~~~~~~~aPe~~~~~~~t~ksDVwSfGvvl~Ellt 680 (786)
.....+.+||... ...+.+.=|||+|+++|.-+-
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0112344677543 245678889999999999875
No 447
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=90.63 E-value=0.35 Score=33.35 Aligned_cols=27 Identities=22% Similarity=0.400 Sum_probs=11.1
Q ss_pred hhhhHhhhHHHHHHHHHHHHHHHhhhcc
Q 003926 391 VLALSIIGGIIGGISLVVIAFLLVRRTK 418 (786)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (786)
.++.++++ ++.++++.++.++++|||+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 34444444 3333333333344444443
No 448
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.98 E-value=0.73 Score=49.41 Aligned_cols=29 Identities=14% Similarity=0.123 Sum_probs=24.7
Q ss_pred CCccccCCCCCceeecCC------CcccccCCCcc
Q 003926 605 PGVFSNNLKITDILLDQN------LVAKISSYNLP 633 (786)
Q Consensus 605 ~~ivHrdlk~~NILld~~------~~~kl~DfGl~ 633 (786)
..++|+|+.+.||+++.+ ..+.+.||..+
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a 278 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence 468999999999999876 67888888765
No 449
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=88.41 E-value=0.56 Score=50.81 Aligned_cols=73 Identities=11% Similarity=0.065 Sum_probs=45.6
Q ss_pred CccCCCCCceeEEEEecC--------CcEEEEEEecccCCCChHHHHHHHHHHhcCCCCCc-ceeeeeeeeccccCCCCc
Q 003926 483 AFMGEGSQGQMYRGRLKN--------GTFVAIRCLKMKKCHSTRNFMHHIELISKLRHRHL-VSALGHCFECYFDDSSVS 553 (786)
Q Consensus 483 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~NI-v~l~g~~~~~~~~~~~~~ 553 (786)
+.+..|-...+|+....+ +..+++|+..... ...-+-.+|.++++.+.-.++ .++++.+.
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~---------- 144 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP---------- 144 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----------
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----------
Confidence 557778888999998763 5778888764322 111123578888877753333 34443221
Q ss_pred eEEEEEecCCCCCh
Q 003926 554 RIFLIFEYVPNGTL 567 (786)
Q Consensus 554 ~~~LV~Ey~~~GsL 567 (786)
-++||||+++..|
T Consensus 145 -~~~I~efI~G~~l 157 (424)
T 3mes_A 145 -EGRIEEFIDGEPL 157 (424)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CCEEEEEeCCccC
Confidence 2789999998654
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.83 E-value=0.077 Score=58.51 Aligned_cols=60 Identities=7% Similarity=-0.043 Sum_probs=18.2
Q ss_pred cCccCCCCCceeEEEEecC-CcEEEE------EEecccCC--CChHHHHHHHHHHhcCCCCCcceeeeeeee
Q 003926 482 SAFMGEGSQGQMYRGRLKN-GTFVAI------RCLKMKKC--HSTRNFMHHIELISKLRHRHLVSALGHCFE 544 (786)
Q Consensus 482 ~~~iG~G~fg~Vy~~~~~~-g~~vAv------K~l~~~~~--~~~~~f~~E~~~l~~l~H~NIv~l~g~~~~ 544 (786)
.+.+| ||.||+|.+.. ...||| |..+.... .....|.+|..+++..+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 45566 99999999764 468898 76654322 223579999999999999999999988654
No 451
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=83.70 E-value=1.4 Score=29.48 Aligned_cols=26 Identities=27% Similarity=0.337 Sum_probs=11.1
Q ss_pred hhhhHhhhHHHHHHH-HHHHHHHHhhh
Q 003926 391 VLALSIIGGIIGGIS-LVVIAFLLVRR 416 (786)
Q Consensus 391 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ 416 (786)
..+.+++.+.++++. +++++++++||
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CceeeeehHHHHHHHHHHHHHHHHeec
Confidence 334444444444433 33444444443
No 452
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=80.66 E-value=0.54 Score=30.57 Aligned_cols=26 Identities=23% Similarity=0.493 Sum_probs=10.7
Q ss_pred hhhhHhhhHHHHHHHHHHHHHHHhhhc
Q 003926 391 VLALSIIGGIIGGISLVVIAFLLVRRT 417 (786)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (786)
.++.++++ ++.++++...+.+++|||
T Consensus 9 sIaagVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 9 FIIATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred EeHHHHHH-HHHHHHHHHHhheEEeec
Confidence 34444454 333333333334445554
No 453
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=76.76 E-value=1.5 Score=29.83 Aligned_cols=13 Identities=8% Similarity=0.087 Sum_probs=5.9
Q ss_pred hhhhhHhhhHHHH
Q 003926 390 AVLALSIIGGIIG 402 (786)
Q Consensus 390 ~~~~~~~~~~~~~ 402 (786)
..++++++++++.
T Consensus 13 ~~I~~~vv~Gv~l 25 (41)
T 2k9y_A 13 LAVIGGVAVGVVL 25 (41)
T ss_dssp THHHHHHHHHHHH
T ss_pred EEEEeehhHHHHH
Confidence 3444455544443
No 454
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=58.42 E-value=25 Score=33.63 Aligned_cols=116 Identities=7% Similarity=0.097 Sum_probs=72.0
Q ss_pred CCCCCcceeeeeeeeccccCCCCceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCCCCccc
Q 003926 530 LRHRHLVSALGHCFECYFDDSSVSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQFLHTGIVPGVFS 609 (786)
Q Consensus 530 l~H~NIv~l~g~~~~~~~~~~~~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~~ivH 609 (786)
-.||+.++. .+-.. .+.+.+.|+--+ +...+-. -..++...+++++..++.--.+++.. +|
T Consensus 42 ~~~~~Fl~~-~I~e~-------eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~t 102 (215)
T 4ann_A 42 QHSPYFIDA-ELTEL-------RDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YT 102 (215)
T ss_dssp SCCTTBCCE-EEEEC-------SSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EE
T ss_pred ccCCcccce-EEEEc-------ccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eE
Confidence 368888764 22211 344445454443 3332211 12378889999999999888777753 56
Q ss_pred cCCCCCceeecCCCcccccCCCcccccccccccccccccccccCccccccCCCCcccc-eeehhHHHHHHHhCCCCCC
Q 003926 610 NNLKITDILLDQNLVAKISSYNLPLLAENAEKVGHVIPYSGSIDPTNSARGKLEEKID-IYDFGLILLEIIVGRPLKS 686 (786)
Q Consensus 610 rdlk~~NILld~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~t~ksD-VwSfGvvl~ElltG~~p~~ 686 (786)
--+.|+|+.+|.++.+++.-.|+... ++|... + .-| .-.+=+++..+++++..|+
T Consensus 103 f~L~P~NL~f~~~~~p~i~~RGik~~----------------l~P~~~-----~-ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 103 FVLAPDELFFTRDGLPIAKTRGLQNV----------------VDPLPV-----S-EAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CCCSGGGEEECTTSCEEESCCEETTT----------------BSCCCC-----C-HHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEecceEEEcCCCCEEEEEccCccC----------------CCCCCC-----C-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 77899999999999999988776321 222211 1 112 2356677888888876653
No 455
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=51.00 E-value=27 Score=33.53 Aligned_cols=70 Identities=11% Similarity=0.055 Sum_probs=50.9
Q ss_pred CceEEEEEecCCCCChhHHhhcCCCCCCCCHHHHHHHHHHHHHHhh-hhhcCCCCCccccCCCCCceeecCCCcccccCC
Q 003926 552 VSRIFLIFEYVPNGTLRSWISEGHAHQSLTWTQRISAAIGVAKGIQ-FLHTGIVPGVFSNNLKITDILLDQNLVAKISSY 630 (786)
Q Consensus 552 ~~~~~LV~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~ia~~ia~gL~-yLH~~~~~~ivHrdlk~~NILld~~~~~kl~Df 630 (786)
.+.+.+.|+--+++-=...++ .++...+++++..++.-.. +++. -+|--+.|+|+.+|.++.+++.-.
T Consensus 60 eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hR 128 (219)
T 4ano_A 60 EDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHV 128 (219)
T ss_dssp SSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCC
T ss_pred CCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEc
Confidence 355566666554433233343 3788899999999988777 6665 356678999999999999999888
Q ss_pred Cc
Q 003926 631 NL 632 (786)
Q Consensus 631 Gl 632 (786)
|+
T Consensus 129 Gi 130 (219)
T 4ano_A 129 GV 130 (219)
T ss_dssp EE
T ss_pred CC
Confidence 86
No 456
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=48.41 E-value=22 Score=22.66 Aligned_cols=25 Identities=24% Similarity=0.393 Sum_probs=13.1
Q ss_pred hHhhhHHHHHHHHHHHHHHHhhhcc
Q 003926 394 LSIIGGIIGGISLVVIAFLLVRRTK 418 (786)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (786)
+.+++++++++.++...|+++|.|+
T Consensus 10 lt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 10 LTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCceeEEEcccc
Confidence 3344455544555555666665443
No 457
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=45.67 E-value=16 Score=28.87 Aligned_cols=8 Identities=38% Similarity=0.812 Sum_probs=3.1
Q ss_pred hhhHhhhH
Q 003926 392 LALSIIGG 399 (786)
Q Consensus 392 ~~~~~~~~ 399 (786)
++++++++
T Consensus 13 Iv~gvi~g 20 (79)
T 2knc_B 13 VLLSVMGA 20 (79)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 33344433
No 458
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=42.33 E-value=26 Score=22.45 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=11.7
Q ss_pred hhhHhhhHHHHHHHHHHHHHHHhh
Q 003926 392 LALSIIGGIIGGISLVVIAFLLVR 415 (786)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~ 415 (786)
.+.+++.+.+++++++++.++++.
T Consensus 8 aIaGIVvgdi~~t~~i~~~vy~~~ 31 (33)
T 2l34_A 8 VLAGIVVGDLVLTVLIALAVYFLG 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEeEeHHHHHHHHHHHHHHhhee
Confidence 344455454544445555555543
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.97 E-value=55 Score=26.94 Aligned_cols=45 Identities=18% Similarity=0.137 Sum_probs=23.4
Q ss_pred CccCCCccCCCCCCCCEEeccCCCCCCCCCccccCCCCCcEEEccc
Q 003926 119 LWGPLSGKISRLSSLEILNMSSNFLNGAIPQELSILTSLQTLILDE 164 (786)
Q Consensus 119 l~g~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 164 (786)
++.+-...|.++++|+.+.|-.+ ++.+-...|.+|.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33334455566666666665544 2333344555666666555544
No 460
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=39.16 E-value=31 Score=23.62 Aligned_cols=15 Identities=27% Similarity=0.448 Sum_probs=6.2
Q ss_pred hhHHHHHHHHHHHHH
Q 003926 397 IGGIIGGISLVVIAF 411 (786)
Q Consensus 397 ~~~~~~~~~~~~~~~ 411 (786)
++++++++++++++.
T Consensus 13 v~gvi~~ivliGl~l 27 (43)
T 2k9j_B 13 LLSVMGAILLIGLAA 27 (43)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444444433
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=36.28 E-value=45 Score=24.89 Aligned_cols=17 Identities=18% Similarity=0.636 Sum_probs=9.4
Q ss_pred hhhHHHHHHHHHHHHHH
Q 003926 396 IIGGIIGGISLVVIAFL 412 (786)
Q Consensus 396 ~~~~~~~~~~~~~~~~~ 412 (786)
++|+++++++++++.++
T Consensus 13 vlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 45555555555555555
No 462
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=35.15 E-value=71 Score=23.04 Aligned_cols=12 Identities=17% Similarity=0.592 Sum_probs=5.3
Q ss_pred hhhhhHhhhHHH
Q 003926 390 AVLALSIIGGII 401 (786)
Q Consensus 390 ~~~~~~~~~~~~ 401 (786)
..+++++++|++
T Consensus 13 wiIi~svl~GLl 24 (54)
T 2knc_A 13 WWVLVGVLGGLL 24 (54)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444443
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.74 E-value=1e+02 Score=25.26 Aligned_cols=45 Identities=13% Similarity=0.086 Sum_probs=21.1
Q ss_pred CCCCCCccccCCCCCcEEEcccccCCCCCCcccCCCCCCCEEEccC
Q 003926 143 LNGAIPQELSILTSLQTLILDENMLAGRVPDWLGSLPILAVLSLRN 188 (786)
Q Consensus 143 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 188 (786)
++.+-...|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33333445555566655555443 2222233455555555554443
No 464
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=30.46 E-value=19 Score=38.37 Aligned_cols=30 Identities=13% Similarity=0.170 Sum_probs=23.9
Q ss_pred CccccCCCCCceee------cCCCcccccCCCcccc
Q 003926 606 GVFSNNLKITDILL------DQNLVAKISSYNLPLL 635 (786)
Q Consensus 606 ~ivHrdlk~~NILl------d~~~~~kl~DfGl~~~ 635 (786)
.++|+|+.+.||++ +++..+.+.||..+..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4456688999987643
No 465
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=24.79 E-value=1.4e+02 Score=21.50 Aligned_cols=13 Identities=31% Similarity=0.473 Sum_probs=5.8
Q ss_pred hhhhhhHhhhHHH
Q 003926 389 KAVLALSIIGGII 401 (786)
Q Consensus 389 ~~~~~~~~~~~~~ 401 (786)
...+++++++|++
T Consensus 9 ~WiIi~svl~GLL 21 (54)
T 2l8s_A 9 LWVILLSAFAGLL 21 (54)
T ss_dssp THHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 3444444444443
Done!