Your job contains 1 sequence.
>003928
MVAVGLKGLPSSRQRLCDLVEDSLMGGDDKSYKPGRKKKGLNRKAKKESFGFDADNSNKN
SSGHGADGSASARKSWKHQNASDPKTSVVRKQVDPDLAKYFAEISNLFESNEVDLEERSV
LCRNALEETRGKELELATDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSH
VAETALKSLAMHLQDEHAHSIIEETLKSICKVIVANPVDVMCNCYGSHVLRSLLCLCRGA
PLDSSDFHRAKPSQILAERLNLDASQSNRNNLSYHHPVFSELSKFLISGILASSRKDLRT
LQTDQYSSLVLQTALRLLVGNDPELLQIISILLGSNKDNVVEGNFIPMTVVHDVLNLMKE
TAYSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALI
WEELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCIVPGIL
FLESYFSCEDKSNWNWPKGIKIQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLEAA
KDAAGARVIEAYLSSKVSAKQKHRVVLKLKGHFGELSVHPSGSFTVERCFTASSLSLRET
IASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQSAKQLTYKEFYSTFGSNDT
KSSRKDSFLADSSKQTSNSQGIKNMRKEIDNCLDSTALLSGKSGLKRRSEKEEHRSEKYA
KHVMADDISKGKNKKKNKKNQVASEYAGPSSKGAEIAAKPFLSTDKTVKKRNRSNRPSKA
SKKLKP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003928
(786 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2193982 - symbol:PUM23 "pumilio 23" species:37... 2047 2.1e-213 2
MGI|MGI:1915092 - symbol:Nop9 "NOP9 nucleolar protein" sp... 409 1.5e-35 1
UNIPROTKB|A5D7H7 - symbol:LOC528833 "Uncharacterized prot... 408 1.9e-35 1
RGD|1308396 - symbol:Nop9 "NOP9 nucleolar protein" specie... 405 4.3e-35 1
UNIPROTKB|F1SGQ1 - symbol:NOP9 "Uncharacterized protein" ... 399 2.2e-34 1
DICTYBASE|DDB_G0276255 - symbol:DDB_G0276255 "Pumilio dom... 292 5.6e-34 2
UNIPROTKB|E2QTR5 - symbol:C14orf21 "Uncharacterized prote... 395 6.2e-34 1
UNIPROTKB|Q86U38 - symbol:NOP9 "Nucleolar protein 9" spec... 394 8.0e-34 1
FB|FBgn0033169 - symbol:CG11123 species:7227 "Drosophila ... 260 1.7e-25 2
ASPGD|ASPL0000071747 - symbol:AN10618 species:162425 "Eme... 246 6.6e-23 2
POMBASE|SPAC6G9.02c - symbol:nop9 "RNA-binding protein No... 218 2.8e-14 1
SGD|S000003547 - symbol:NOP9 "Essential subunit of U3-con... 118 3.7e-10 2
>TAIR|locus:2193982 [details] [associations]
symbol:PUM23 "pumilio 23" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=IEP]
[GO:0009749 "response to glucose stimulus" evidence=IEP]
[GO:0010252 "auxin homeostasis" evidence=IMP] InterPro:IPR001313
InterPro:IPR016024 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006417
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0009749 GO:GO:0009744 GO:GO:0003723 EMBL:AC067754
EMBL:AC016529 GO:GO:0010252 KO:K14790 eggNOG:NOG276912 OMA:ERDLMVH
EMBL:AY035041 EMBL:AY051073 EMBL:BX815356 IPI:IPI00523992
IPI:IPI00532515 PIR:A96747 RefSeq:NP_177376.1 RefSeq:NP_849878.2
RefSeq:NP_974130.1 UniGene:At.24641 ProteinModelPortal:Q9C552
SMR:Q9C552 STRING:Q9C552 PaxDb:Q9C552 PRIDE:Q9C552
EnsemblPlants:AT1G72320.1 GeneID:843564 KEGG:ath:AT1G72320
TAIR:At1g72320 HOGENOM:HOG000084845 InParanoid:Q9C552
PhylomeDB:Q9C552 ProtClustDB:CLSN2679547 Genevestigator:Q9C552
Uniprot:Q9C552
Length = 753
Score = 2047 (725.6 bits), Expect = 2.1e-213, Sum P(2) = 2.1e-213
Identities = 403/695 (57%), Positives = 519/695 (74%)
Query: 1 MVAVGLKGLPSSRQRLCDLVEDSLMGGDDKSYKPXXXXXXXXXXXXXE-SFGFDADNSNK 59
MV+VG K LPS R R + EDSLMG KS + + GFD D+S K
Sbjct: 1 MVSVGSKSLPSRRHRTIE--EDSLMGERGKSSNNHSERNKGMRRKDHKGNRGFDVDSSKK 58
Query: 60 NXXXXXXXXXXXXRK--SWKHQNASDPKTSVVRKQVDPDLAKYFAEISNLFESNEVDLEE 117
N +K ++HQN VRK++DP+ +KYF+EI+NLF+SNEV+LEE
Sbjct: 59 NQSGGAPNVKPASKKHSEFEHQN------QFVRKEIDPETSKYFSEIANLFDSNEVELEE 112
Query: 118 RSVLCRNALEETRGKELELATDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRS 177
RSV+C NALEETRG+E E+ATDYIISH LQTLLEGC++D LCSF+R A VFPAIAMDRS
Sbjct: 113 RSVICGNALEETRGREYEIATDYIISHVLQTLLEGCELDQLCSFIRNSASVFPAIAMDRS 172
Query: 178 GSHVAETALKSLAMHLQDEHAHSIIEETLKSICKVIVANPVDVMCNCYGSHVLRSLLCLC 237
GSHVAE+ALKSLA HL++ A+S+IEE L SICKVIV NP+D+MCNCYGSHVLR LLCLC
Sbjct: 173 GSHVAESALKSLATHLENPDAYSVIEEALHSICKVIVDNPLDMMCNCYGSHVLRRLLCLC 232
Query: 238 RGAPLDSSDFHRAKPSQILAERLNLDASQSNRNNLSYHHPVFSELSKFLISGILASSRKD 297
+G LDS + + AK S+ LA+RLNL SQ + NNL H F + +L+SG+L+ SR+D
Sbjct: 233 KGVSLDSPELYGAKSSKALAKRLNLKMSQLDDNNLEIPHQGFPGMLTYLLSGLLSCSRED 292
Query: 298 LRTLQTDQYSSLVLQTALRLLVGNDPELLQIISILLGSNKDNV-VEGNFIPMTVVHDVLN 356
++ LQ DQYSSLVLQTALRL++ D +LL+II ++L N N VEG I V ++L
Sbjct: 293 MKYLQVDQYSSLVLQTALRLMLKQDEQLLEIIPLILRCNSTNKKVEGFHIETNVAKEILE 352
Query: 357 LMKETAYSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQ 416
MK+ ++SHL+EVILEVAP+SLY+EMF KVF+NSLF+LS CANFV+QAL+SHARDQ+Q
Sbjct: 353 SMKDNSFSHLVEVILEVAPESLYNEMFNKVFKNSLFELSVDRCANFVIQALISHARDQEQ 412
Query: 417 MALIWEELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCIV 476
M ++WEEL +F++LLE G+SGVVA+LIA SQRL +HE KCCEAL AV STN S I+
Sbjct: 413 MGIMWEELAPRFKDLLEQGKSGVVASLIAVSQRLQSHENKCCEALVGAVCSTNESRISIL 472
Query: 477 PGILFLESYFSCEDKSNWNWPKGIKIQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHV 536
P +LFL+ YF C DKS W W G K+ ++G LILQ +F+F S+ IQPY+TS+TSM+A+++
Sbjct: 473 PRLLFLDYYFGCRDKSTWEWAPGAKMHVMGCLILQGIFKFSSDHIQPYITSLTSMKAEYI 532
Query: 537 LEAAKDAAGARVIEAYLSSKVSAKQKHRVVLKLKGHFGELSVHPSGSFTVERCFTASSLS 596
E AKD++GARVIEA+L+S + KQK R+++KL+GHFGELS+H SGSFTVE+CF A +L+
Sbjct: 533 TETAKDSSGARVIEAFLASDAATKQKRRLIIKLRGHFGELSLHTSGSFTVEKCFDACNLT 592
Query: 597 LRETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQSAKQLTYKEFYSTFG 656
LRE IASEL V+ +LSKTKQGP+L+RKLDIDG+ +RPDQW+ +Q AKQ TY EF S FG
Sbjct: 593 LREAIASELLDVKVDLSKTKQGPYLLRKLDIDGYASRPDQWKSRQEAKQSTYNEFCSAFG 652
Query: 657 SNDTKSSRKDSFLADSSKQTSNSQGIKNMRKEIDN 691
SN + K++F++D+S+ + +KN RKEID+
Sbjct: 653 SNKSNFP-KNTFVSDASEDAAQEIEVKNTRKEIDH 686
Score = 38 (18.4 bits), Expect = 2.1e-213, Sum P(2) = 2.1e-213
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 759 KPFLSTDKTVKKRNRSNR 776
+PFLS + T K R+ SN+
Sbjct: 734 RPFLSGEMTGKNRH-SNK 750
>MGI|MGI:1915092 [details] [associations]
symbol:Nop9 "NOP9 nucleolar protein" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001313 InterPro:IPR016024 PROSITE:PS50302
SMART:SM00025 MGI:MGI:1915092 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 KO:K14790 eggNOG:NOG276912
OMA:ERDLMVH CTD:161424 HOVERGEN:HBG051002 OrthoDB:EOG4X6C82
EMBL:AK011570 EMBL:AK015585 EMBL:AK032873 EMBL:AK037831
EMBL:AK050912 EMBL:AK083861 EMBL:AK146020 EMBL:AK159798
EMBL:BC018523 IPI:IPI00330623 RefSeq:NP_080679.3 UniGene:Mm.180338
ProteinModelPortal:Q8BMC4 SMR:Q8BMC4 PhosphoSite:Q8BMC4
PaxDb:Q8BMC4 PRIDE:Q8BMC4 Ensembl:ENSMUST00000019441 GeneID:67842
KEGG:mmu:67842 UCSC:uc007uao.2 GeneTree:ENSGT00390000004964
InParanoid:Q8BMC4 NextBio:325681 Bgee:Q8BMC4
CleanEx:MM_2610027L16RIK Genevestigator:Q8BMC4
GermOnline:ENSMUSG00000019297 Uniprot:Q8BMC4
Length = 636
Score = 409 (149.0 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 155/585 (26%), Positives = 266/585 (45%)
Query: 93 VDPDLAKYFAEISNLFESNEVDLEERSVLCRNALEETRGKELELATDYIISHTLQTLLEG 152
+ P+ YF + + EER ++ RN L+E + L LAT+ S LQ LL
Sbjct: 57 LSPEALGYFRRALSALKVAPDAAEERELMARNILKEVEAQALALATNRTGSEMLQELLGF 116
Query: 153 CDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAMHL---------QDEHAHSIIE 203
+ LC +A R G HV ++AL L L ++E
Sbjct: 117 SPLKPLCRVWAALRPNLRFVACHRCGVHVLQSALLQLPRLLRRPAEAEEEEEEEEEGGPS 176
Query: 204 ETLKSICKVIVANPVD---VMC-NCYGSHVLRSLLCLCRGAPLDSSDFHRAKPSQILAER 259
+TL+ + + A D C + +GS V+R+LL + G L+S R KP
Sbjct: 177 QTLEELVLGLAAEVCDDFLFFCGDTHGSFVVRTLLQVLGGTLLESE---RGKPR------ 227
Query: 260 LNLDASQSNRNNLSYHHPVFSELSK-FL--ISGILASSRKDLRTLQTDQYSSLVLQTALR 316
+S++ R + P E+ K FL + + A KD+ TD+ SS LQ AL+
Sbjct: 228 -GSQSSETQRTSARECKPTDFEVPKTFLNRLQDLSACFLKDIAVFITDKISSFCLQVALQ 286
Query: 317 LLVGNDPE-LLQIISILLG--SNKDNVVEGNFIPMTVVHDVLNLMKETAYSHLMEVILEV 373
+L P+ + ++ S++++ +G+ P+ +L L +T+ S L+E +L V
Sbjct: 287 VLHQKLPQHCAHLCDAVIDYLSSRNSSADGS--PL-----LLFLRDQTS-SRLLEQVLLV 338
Query: 374 APQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALIWEELGGKFRELLE 433
++ F+ L L+ H ANF +Q L+ + ++L++EEL +L
Sbjct: 339 LEAERLQRLYKDHFQGQLCSLAEHPIANFPLQRLLDAITSPELLSLVFEELSPALEMVLA 398
Query: 434 MGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPR--CIVP---GILFLESYFS- 487
G GVV AL+ A +R+ TH+ + + L A R VP +L E Y+
Sbjct: 399 QGHPGVVVALVEACRRVGTHQAQVLQLLFEAFHCAEPPSRQAACVPLFAALLAYEVYYEL 458
Query: 488 --------CEDKSNWNWPKGIK-IQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLE 538
E + + ++ + ++GSL+LQ + F + + + S++++ +L
Sbjct: 459 MEEEGAVPAEHQVEMATARALREVTVLGSLLLQHLLYFSNPGL--VLRSLSALTGPQLLT 516
Query: 539 AAKDAAGARVIEAYLSS-KVSAKQKHRVVLKLKGHFGELSVHPSGSFTVERCFTASSLSL 597
A+ AG+ V +A LSS V+ KQ+ RV+ LKG + L+ GS ++ ++ ++L
Sbjct: 517 LAQSPAGSHVFDAILSSPSVTHKQRRRVLKTLKGQYVALACSRHGSRVLDAIWSGAALGA 576
Query: 598 RETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQS 642
R+ IA+EL EL + G H+ R + + F R + W +QS
Sbjct: 577 RKEIAAELGEKNQELIQDPFGHHVARNVALTTFLKRREAWEQQQS 621
>UNIPROTKB|A5D7H7 [details] [associations]
symbol:LOC528833 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 SMART:SM00025 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 KO:K14790
eggNOG:NOG276912 OMA:ERDLMVH HOGENOM:HOG000015385
HOVERGEN:HBG051002 OrthoDB:EOG4X6C82 GeneTree:ENSGT00390000004964
EMBL:DAAA02028027 EMBL:BC140558 IPI:IPI00840227
RefSeq:NP_001096735.1 UniGene:Bt.2944 Ensembl:ENSBTAT00000047185
GeneID:528833 KEGG:bta:528833 CTD:100396802 InParanoid:A5D7H7
NextBio:20874911 Uniprot:A5D7H7
Length = 636
Score = 408 (148.7 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 159/597 (26%), Positives = 275/597 (46%)
Query: 82 SDPKTSVVRKQVDPDLAKYFAE-ISNLFESNEVDLEERSVLCRNALEETRGKELELATDY 140
S+P + P+ YF + +S L E+ E EER ++ N L+E + L LAT+
Sbjct: 47 SEPAPDA-HPHLSPEALGYFRQALSALKEAPETG-EERELMVHNVLKEVEAQALALATNR 104
Query: 141 IISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAMHL------- 193
S LQ LL +C +A R G HV ++AL L L
Sbjct: 105 TGSEMLQELLGFSPRKPMCRVWAALHSNLRFVACHRCGVHVLQSALLQLPRLLGSPEEEE 164
Query: 194 --QDEHAHSIIEETLKSICKVIVANPVD---VMC-NCYGSHVLRSLLCLCRGAPLDSSDF 247
++E ETL+ + + A D C + +GS V+R+LL + G L+S
Sbjct: 165 EEEEEDGKDGHVETLEELVLGLAAEVCDDFLFYCGDTHGSFVVRTLLQVLGGTLLESERA 224
Query: 248 -HRAKPSQILAERLNLDASQSNRNNLSYHHP-VFSELSKFLISGILASSRKDLRTLQTDQ 305
HR S + + + ++ + P F + L S L KD+ TD+
Sbjct: 225 RHRGSQSPEAQKAPSRECKPTD-----FEVPETFLNCLQNLSSCFL----KDIAVFITDK 275
Query: 306 YSSLVLQTALRLLVGNDPELL-QIISILLG--SNKDNVVEGNFIPMTVVHDVLNLMKETA 362
SS LQ AL++L P+ + S ++G S++++ +G+ P+ +L L +T+
Sbjct: 276 ISSFCLQVALQILHRKLPQFCAHLCSAVIGYLSSRNSSADGS--PL-----LLFLRDQTS 328
Query: 363 YSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALIWE 422
S L+E +L V+ +F + L L++H ANF +Q + + ++ ++E
Sbjct: 329 -SRLLEQVLLVSEPPRLQSLFEDHLQGHLQALAAHSIANFPLQRFLDAITTPELLSPVFE 387
Query: 423 ELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCI--VP--- 477
EL +L G GVV AL+ A +R+ TH+ + + L A S R + VP
Sbjct: 388 ELSPALEAVLAQGHPGVVIALVGACRRVGTHQAQVLQLLLEAFHCAEPSSRQVACVPLFA 447
Query: 478 GILFLESYFSC---------EDKSNWNWPKGI-KIQIIGSLILQAVFRFPSEFIQPYVTS 527
++ E Y+ E + +G+ ++ ++GSL+LQ + F S + + S
Sbjct: 448 ALMAYEVYYGLAEEEGAVPMEHQVEMAAARGLGEVAVLGSLLLQHLLHFSSPCL--ILQS 505
Query: 528 ITSMEADHVLEAAKDAAGARVIEAYLSS-KVSAKQKHRVVLKLKGHFGELSVHPSGSFTV 586
++++ +L A+ AG+ V++A L+S V+ KQ+ RV+ LKGH+ L+ GS +
Sbjct: 506 LSALTGPQLLTLAQSPAGSHVLDAVLTSPSVTRKQRRRVLKTLKGHYVTLACSRHGSRVL 565
Query: 587 ERCFTASSLSLRETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQSA 643
+ ++ ++L R+ IA+EL EL + G H+ R + + F R + W +Q A
Sbjct: 566 DAIWSGAALGARKEIAAELGERNQELIRDPFGHHVARNVALTTFLKRREAWEQEQGA 622
>RGD|1308396 [details] [associations]
symbol:Nop9 "NOP9 nucleolar protein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 SMART:SM00025 RGD:1308396
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:CH474049 KO:K14790 OMA:ERDLMVH CTD:161424 OrthoDB:EOG4X6C82
GeneTree:ENSGT00390000004964 IPI:IPI00203934 RefSeq:NP_001099510.1
UniGene:Rn.91559 Ensembl:ENSRNOT00000027604 GeneID:290235
KEGG:rno:290235 UCSC:RGD:1308396 NextBio:630800 Uniprot:D3ZKI9
Length = 634
Score = 405 (147.6 bits), Expect = 4.3e-35, P = 4.3e-35
Identities = 153/584 (26%), Positives = 267/584 (45%)
Query: 93 VDPDLAKYFAEISNLFESNEVDLEERSVLCRNALEETRGKELELATDYIISHTLQTLLEG 152
+ P+ YF + + EER ++ RN L+E + L LAT+ S LQ LL
Sbjct: 57 LSPEALGYFRRALSALKVAPDAAEERELMARNILKEVEAQALALATNRTGSEMLQELLGF 116
Query: 153 CDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAMHL-------QDEHAHSIIEET 205
+ LC +A R G HV ++AL L L ++E +T
Sbjct: 117 SPLKPLCRVWIALRPNLRFVACHRCGVHVLQSALLQLPRLLRSPAEADEEEEGEDGPSQT 176
Query: 206 LKSICKVIVANPVD---VMC-NCYGSHVLRSLLCLCRGAPLDSSDFHRAKPSQILAERLN 261
L+ + + A D C + +GS V+R+LL + G L+S R KP
Sbjct: 177 LEELVLGLAAEVCDDFLFFCGDTHGSFVVRTLLQVLGGTLLESE---RVKPR-------G 226
Query: 262 LDASQSNRNNLSYHHPVFSELSK-FL--ISGILASSRKDLRTLQTDQYSSLVLQTALRLL 318
+S++ R + P E+ K FL + + A KD+ TD+ SS LQ AL++L
Sbjct: 227 SQSSETQRTSARECKPTDFEVPKTFLNRLQDLSACFLKDIAVFITDKISSFCLQVALQVL 286
Query: 319 VGNDPE-LLQIISILLG--SNKDNVVEGNFIPMTVVHDVLNLMKETAYSHLMEVILEVAP 375
P+ + ++ S++++ G+ P+ +L L +T+ L +V+L + P
Sbjct: 287 HHKLPQHCAHLCDAVIDYLSSRNSSAGGS--PL-----LLFLRDQTSSRLLEQVLLVLEP 339
Query: 376 QSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALIWEELGGKFRELLEMG 435
+ L +F F+ L+ L+ H ANF +Q L+ + ++L++EEL +L G
Sbjct: 340 ERL-QRLFKNHFQGQLYSLAEHPIANFPLQRLLDAVTSPELLSLVFEELSPALEAVLARG 398
Query: 436 RSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCI--VP---GILFLESYFS--- 487
GVV AL+ A +R+ H+ + + L A R + VP +L E Y+
Sbjct: 399 HPGVVVALVEACRRVGAHQAQVLQLLFEAFHCAEPPSRQVACVPLFASLLAYEVYYELME 458
Query: 488 ------CEDKSNWNWPKGIK-IQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLEAA 540
E + + ++ + ++GSL+LQ + F + + + S++++ +L A
Sbjct: 459 EEGAVPAEHQVEMASARPLREVTVLGSLLLQHLLYFSNPGL--VLRSLSALTGPQLLTLA 516
Query: 541 KDAAGARVIEAYLSS-KVSAKQKHRVVLKLKGHFGELSVHPSGSFTVERCFTASSLSLRE 599
+ AG+ V +A L+S V+ KQ+ RV+ LKG + L+ GS + ++ ++L R+
Sbjct: 517 QSPAGSHVFDAILTSPSVTHKQRRRVLKTLKGQYVALACSRHGSRVFDAIWSGAALGARK 576
Query: 600 TIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQSA 643
IA+EL EL + G H+ R + + F R W +Q++
Sbjct: 577 EIAAELGEQNQELIQDPFGHHVARNVALTTFLKRRQAWEQQQNS 620
>UNIPROTKB|F1SGQ1 [details] [associations]
symbol:NOP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 KO:K14790 OMA:ERDLMVH
GeneTree:ENSGT00390000004964 EMBL:CU019590 RefSeq:XP_001927753.1
UniGene:Ssc.71739 Ensembl:ENSSSCT00000002228 GeneID:100154880
KEGG:ssc:100154880 Uniprot:F1SGQ1
Length = 637
Score = 399 (145.5 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 157/601 (26%), Positives = 278/601 (46%)
Query: 79 QNASDPKTSVVRKQVDPDLAKYFAE-ISNLFESNEVDLEERSVLCRNALEETRGKELELA 137
+ S+P T + + YF +S L E+ E EER ++ N L+E + L LA
Sbjct: 43 EGRSEPATDA-HPHLSSEALGYFRRALSALKEAPEAG-EERELMVHNVLKEVEAQALALA 100
Query: 138 TDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAMHL---- 193
T+ S LQ LL + LC +A R G HV ++AL L L
Sbjct: 101 TNRTGSEMLQELLGFSPLKPLCRVWAVLRPNLRFVACHRCGVHVLQSALLQLPRLLGSPA 160
Query: 194 ----QDEHAHSIIEETLKSICKVIVANPVDVM------C-NCYGSHVLRSLLCLCRGAPL 242
++E + +++L+++ ++++ +V C + +GS V+R+LL + G L
Sbjct: 161 EEEEEEEEEENGKDDSLETVEELVLGLAAEVCDDFLFYCGDTHGSFVVRTLLQVLGGTLL 220
Query: 243 DSSDF-HRAKPSQILAERLNLDASQSNRNNLSYHHPVFSELSKFLISGILASSRKDLRTL 301
DS HR S A+R A + P E + + + KD+
Sbjct: 221 DSERARHRGSQSPE-AQR----APSRECKPTDFEVP---ETFLNCLQDLSSCFVKDIAVF 272
Query: 302 QTDQYSSLVLQTALRLLVGNDPELL-QIISILLG--SNKDNVVEGNFIPMTVVHDVLNLM 358
TD+ SS LQ AL++L P+ + S ++G S++++ +G+ P+ +L L
Sbjct: 273 ITDKISSFCLQMALQILHRKLPQFCAHLCSAVIGYLSSRNSSADGS--PL-----LLFLR 325
Query: 359 KETAYSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMA 418
+T+ S L+E +L V+ + +F F+ L L++H ANF +Q + + ++
Sbjct: 326 DQTS-SRLLEQVLLVSEPARLQSLFEDHFQGHLQTLAAHPIANFPLQRFLDAITTTELLS 384
Query: 419 LIWEELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCI--V 476
++EEL +L G GVV AL+ A +R+ TH+ + + L A + R + V
Sbjct: 385 PVFEELSPALEAVLAQGHPGVVIALVGACRRVGTHQAQVLQLLLEAFHCAEPASRQVACV 444
Query: 477 P---GILFLESYFS---------CEDKSNWNWPKGI-KIQIIGSLILQAVFRFPSEFIQP 523
P ++ E Y+ E + + + ++ +IGSL+LQ + F S +
Sbjct: 445 PLFAALMAYEVYYGLVEEEGAVPAEHQVEMATARDLGEVTVIGSLLLQHLLHFSSPSL-- 502
Query: 524 YVTSITSMEADHVLEAAKDAAGARVIEAYLSSK-VSAKQKHRVVLKLKGHFGELSVHPSG 582
+ S+ ++ +L A+ AG+ V++A L+S V+ KQ+ RV+ LKG + L+ G
Sbjct: 503 VLRSLGALTGPQLLTLAQSPAGSHVLDAVLASPAVTRKQRRRVLKTLKGQYVALACSRHG 562
Query: 583 SFTVERCFTASSLSLRETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQS 642
S ++ + ++L R+ IA+EL EL + G H+ R + + F R + W +Q
Sbjct: 563 SRVLDAIWNGAALGARKEIAAELGERNQELIRDPFGHHVARNVALTTFLKRREAWEQQQG 622
Query: 643 A 643
A
Sbjct: 623 A 623
>DICTYBASE|DDB_G0276255 [details] [associations]
symbol:DDB_G0276255 "Pumilio domain-containing
protein C14orf21" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
dictyBase:DDB_G0276255 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AAFI02000014 GO:GO:0003723 KO:K14790
eggNOG:NOG276912 OMA:ERDLMVH RefSeq:XP_643343.1
ProteinModelPortal:Q551Y5 EnsemblProtists:DDB0217770 GeneID:8620393
KEGG:ddi:DDB_G0276255 InParanoid:Q551Y5 ProtClustDB:CLSZ2430926
Uniprot:Q551Y5
Length = 841
Score = 292 (107.8 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 77/337 (22%), Positives = 165/337 (48%)
Query: 354 VLNLMKETAYSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARD 413
++ MK S E+I++ AP+ ++ E+ ++ ++ L DLS AN VVQ L+ H
Sbjct: 475 LIKAMKNQFGSVFCEIIVKTAPEVIFLELI-QLCKHDLLDLSEDFYANHVVQQLIDHCHC 533
Query: 414 QDQMALIWEELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEAL-AAAVSSTNVSP 472
+ + +E F++L +MGR +V LI S + +E++ + L A + +
Sbjct: 534 EGHFLTLIQEFKDSFKQLFKMGRGLIVQKLIEQSLKWSAYEKEIIKHLNEALLPNYKTDQ 593
Query: 473 RCIVPGILFLESYFSCEDKSNWNWPKGIKIQIIGSLILQAVFRFPSEFIQPYVTSITSME 532
+ I +L LE S N + G++ILQ +F+FP+++ + + S S++
Sbjct: 594 KEIAKYLLGLEGNVS----HNQMY------SACGAVILQLLFKFPNDYNKTTIESFLSLD 643
Query: 533 ADHVLEAAKDAAGARVIEAYLSSK-VSAKQKHRVVLKLKGHFGELSVHPSGSFTVERCFT 591
+++L A + G++V++ +L S+ V +K++++ K G+F + GS+++E+ +
Sbjct: 644 IEYLLSLATNVIGSKVLDGFLDSQNVPLPKKNQLITKFNGNFVTIGEDRYGSYSIEKMYK 703
Query: 592 ASSLSLRETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQSAKQLTYKEF 651
+ ++ IA EL L G +++ I+ + + D W ++K K F
Sbjct: 704 IADFKQKDVIAVELMKEEERLFARPCGRYVLMICQINKYKKKKDSWANDVTSKDKKRKLF 763
Query: 652 YSTFGSNDTKSSRKDSFLADSSKQTSNSQGIKNMRKE 688
N+ + + + ++K+++ Q I+ + ++
Sbjct: 764 SDLLNDNENEKDTTTTATSTNNKKSNKKQEIEKVDQD 800
Score = 162 (62.1 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 92 QVDPDLAKYFAEISNLFESNE--VDLEERSVLCRNALEETRGKELELATDYIISHTLQTL 149
Q+D D YF I +L E VD EE ++ NA +E GKE +A D S L+++
Sbjct: 199 QLDLDTRSYFTRIESLINKQEEAVDQEEIEIMIENAYKEIEGKESLVACDKKTSLVLESM 258
Query: 150 LEGC-DVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLA--MHLQDEHAHSIIEETL 206
+ C D + F K F + D +GS V E L+S ++ D+ + E L
Sbjct: 259 FQKCKDPKVIVKFFESFGKEFEKLINDANGSRVIEGLLRSTPKIVNRSDKETLNKFNEIL 318
Query: 207 KSICKVIVANPVDVMCNCYGSHVLRSLLCLCRG 239
++C +++ + + + + Y S+V S++ + G
Sbjct: 319 FNLCDLLLKDILKTVTDRYASYVFSSIILILSG 351
Score = 48 (22.0 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 35/152 (23%), Positives = 65/152 (42%)
Query: 184 TALKSLAMHLQDEHAHSIIEETLKSICKVIVANPVDVMCNCYGSHVLRSLLCLCRGAPL- 242
T ++SL ++ IE +++ K I V C+ S VL S+ C+ +
Sbjct: 209 TRIESLINKQEEAVDQEEIEIMIENAYKEIEGKESLVACDKKTSLVLESMFQKCKDPKVI 268
Query: 243 ----DS--SDFHR----AKPSQILAERLNLDASQSNRNNLSYHHPVFSELSKFLISGILA 292
+S +F + A S+++ L NR++ + F+E+ F + +L
Sbjct: 269 VKFFESFGKEFEKLINDANGSRVIEGLLRSTPKIVNRSDKETLNK-FNEIL-FNLCDLLL 326
Query: 293 SSRKDLRTLQTDQYSSLVLQTALRLLVGNDPE 324
KD+ TD+Y+S V + + +L G E
Sbjct: 327 ---KDILKTVTDRYASYVFSSIILILSGTVKE 355
Score = 39 (18.8 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 204 ETLKSICKVIVANPVDV 220
ET+KSI +V+ P+++
Sbjct: 438 ETIKSIFQVLSNAPIEI 454
Score = 37 (18.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 5/21 (23%), Positives = 16/21 (76%)
Query: 352 HDVLNLMKETAYSHLMEVILE 372
HD+L+L ++ +H+++ +++
Sbjct: 509 HDLLDLSEDFYANHVVQQLID 529
>UNIPROTKB|E2QTR5 [details] [associations]
symbol:C14orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 SMART:SM00025 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 KO:K14790
OMA:ERDLMVH CTD:161424 GeneTree:ENSGT00390000004964
EMBL:AAEX03005616 RefSeq:XP_850548.1 Ensembl:ENSCAFT00000019417
GeneID:608429 KEGG:cfa:608429 NextBio:20894083 Uniprot:E2QTR5
Length = 637
Score = 395 (144.1 bits), Expect = 6.2e-34, P = 6.2e-34
Identities = 159/602 (26%), Positives = 277/602 (46%)
Query: 79 QNASDPKTSVVRKQVDPDLAKYFAE-ISNLFESNEVDLEERSVLCRNALEETRGKELELA 137
+ +S+P + + P+ YF +S L E+ E E R ++ N L+E + L LA
Sbjct: 42 EGSSEPALAA-HPHLSPEALGYFRRALSALKEAPEPGAE-RELMVHNVLKEVEAQALALA 99
Query: 138 TDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAMHL---- 193
T+ S +Q LL + LC +A R G HV ++AL L L
Sbjct: 100 TNRTGSEIMQELLGFSPLKSLCRIWAALRPSLRLVACHRCGVHVLQSALLQLPRLLGSLA 159
Query: 194 QDEHAHSIIEET-----LKSICKVIV--ANPV--DVMCNC---YGSHVLRSLLCLCRGAP 241
+ E + EE L+++ ++++ A+ V D + C +GS V+R+LL + G
Sbjct: 160 EKEEEEDVEEEDGKDGPLETLEELVLGLASEVCDDFLFYCGDTHGSFVVRTLLQVLGGTL 219
Query: 242 LDSSDF-HRAKPSQILAERLNLDASQSNRNNLSYHHPVFSELSKFLISGILASSRKDLRT 300
L+S HR S + A + + + L L S L KD+
Sbjct: 220 LESERARHRGSQSP---DTQRAPARECKPTDFEVPKTFLNHLQD-LSSCFL----KDIAV 271
Query: 301 LQTDQYSSLVLQTALRLLVGNDPELL-QIISILLG--SNKDNVVEGNFIPMTVVHDVLNL 357
TD+ SS LQ A ++L P+ + S ++ S++++ +G+ P+ +L L
Sbjct: 272 FITDKISSFCLQVAFQILHRKLPQFCAHLCSAVISYLSSRNSSADGS--PL-----LLFL 324
Query: 358 MKETAYSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQM 417
+T+ L +V+L + P L +F F+ L L++H ANF +Q L+ ++ +
Sbjct: 325 RDQTSSRLLEQVLLVLEPLRL-QSLFEDHFQGQLQALAAHPIANFPLQRLLDAITTRELL 383
Query: 418 ALIWEELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCI-- 475
+ ++EEL +L G SGVV AL+ A +R+ H+ + + L A S R +
Sbjct: 384 SPVFEELSPALEAVLAQGHSGVVIALVGACRRVGAHQAQVLQLLLEAFHCAEPSSRQVAC 443
Query: 476 VP------------GILFLESYFSCEDKSNWNWPKGI-KIQIIGSLILQAVFRFPSEFIQ 522
VP G+L E E + + + ++ ++GSL+LQ + F S I
Sbjct: 444 VPLFATLMAYEVYYGLLEEEGVVPTEHQVEMAMAQALGEVTVLGSLLLQHLLHFSSPGI- 502
Query: 523 PYVTSITSMEADHVLEAAKDAAGARVIEAYLSS-KVSAKQKHRVVLKLKGHFGELSVHPS 581
+ S+ ++ +L A+ AG+ V++A L+S V+ KQ+ RV+ LKG + L+
Sbjct: 503 -ILQSLGALTGPQLLTLAQSPAGSHVLDAVLTSPSVTRKQRRRVLKTLKGQYVALACSRH 561
Query: 582 GSFTVERCFTASSLSLRETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQ 641
GS ++ ++ ++L R+ IA+EL EL + G H+ R + + F R + W +Q
Sbjct: 562 GSRVLDAIWSGAALGARKEIAAELGERDQELIRDPFGHHVARNVALTTFLKRREAWEQQQ 621
Query: 642 SA 643
A
Sbjct: 622 GA 623
>UNIPROTKB|Q86U38 [details] [associations]
symbol:NOP9 "Nucleolar protein 9" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001313 InterPro:IPR016024 PROSITE:PS50302 SMART:SM00025
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AL096870 UniGene:Hs.708040 GermOnline:ENSG00000196943
KO:K14790 eggNOG:NOG276912 OMA:ERDLMVH EMBL:AB095941 EMBL:BX248018
EMBL:BC025332 IPI:IPI00216999 RefSeq:NP_777573.1
ProteinModelPortal:Q86U38 SMR:Q86U38 PhosphoSite:Q86U38
DMDM:34921618 PaxDb:Q86U38 PRIDE:Q86U38 Ensembl:ENST00000267425
GeneID:161424 KEGG:hsa:161424 UCSC:uc001wol.1 CTD:161424
GeneCards:GC14P024770 H-InvDB:HIX0011567 HGNC:HGNC:19826
HPA:HPA000850 neXtProt:NX_Q86U38 PharmGKB:PA134867241
HOGENOM:HOG000015385 HOVERGEN:HBG051002 InParanoid:Q86U38
OrthoDB:EOG4X6C82 PhylomeDB:Q86U38 GenomeRNAi:161424 NextBio:88064
ArrayExpress:Q86U38 Bgee:Q86U38 CleanEx:HS_C14orf21
Genevestigator:Q86U38 Uniprot:Q86U38
Length = 636
Score = 394 (143.8 bits), Expect = 8.0e-34, P = 8.0e-34
Identities = 155/607 (25%), Positives = 277/607 (45%)
Query: 73 RKSWKHQNASDPKTSVVRKQVDPDLAKYFAE-ISNLFESNEVDLEERSVLCRNALEETRG 131
R+ W + + P+ YF +S L E+ E EER ++ N ++E
Sbjct: 37 RQPWPPPDGRSEPAPDSHPHLSPEALGYFRRALSALKEAPETG-EERDLMVHNIMKEVET 95
Query: 132 KELELATDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAM 191
+ L L+T+ S LQ LL + LC +A R G HV ++AL L
Sbjct: 96 QALALSTNRTGSEMLQELLGFSPLKPLCRVWAALRSNLRTVACHRCGVHVLQSALLQLPR 155
Query: 192 HL---------QDEHAHSIIEETLKSICKVIVANPVD---VMC-NCYGSHVLRSLLCLCR 238
L ++E ETL+ + + A D V C + +GS V+R+LL +
Sbjct: 156 LLGSAAEEEEEEEEDGKDGPTETLEELVLGLAAEVCDDFLVYCGDTHGSFVVRTLLQVLG 215
Query: 239 GAPLDSSDFHRAKPSQILAERLNLDASQSNRNNLSYHHPVFSELSKFLISGI--LASS-R 295
G L+S RA+P +S++ + P E+ + ++ + L+SS
Sbjct: 216 GTILESE---RARPR-------GSQSSEAQKTPAQECKPADFEVPETFLNRLQDLSSSFL 265
Query: 296 KDLRTLQTDQYSSLVLQTALRLLVGNDPELL-QIISILLG--SNKDNVVEGNFIPMTVVH 352
KD+ TD+ SS LQ AL++L P+ + + ++G S + + V+G+ P+
Sbjct: 266 KDIAVFITDKISSFCLQVALQVLHRKLPQFCAHLCNAVIGYLSTRGSSVDGS--PL---- 319
Query: 353 DVLNLMKETAYSHLMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHAR 412
+L L +T+ L +V+L + P L +F + + L L++H ANF +Q L+
Sbjct: 320 -LLFLRDQTSSRLLEQVLLVLEPPRL-QSLFEEHLQGQLQTLAAHPIANFPLQRLLDAVT 377
Query: 413 DQDQMALIWEELGGKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSP 472
+ ++ ++EEL +L G GVV AL+ A +R+ ++ K + L A S
Sbjct: 378 TPELLSPVFEELSPVLEAVLAQGHPGVVIALVGACRRVGAYQAKVLQLLLEAFHCAEPSS 437
Query: 473 RCI--VP---GILFLESYFSCEDKSN---------WNWPKGI-KIQIIGSLILQAVFRFP 517
R + VP ++ E Y+ ++ + + + ++GSL+LQ + F
Sbjct: 438 RQVACVPLFATLMAYEVYYGLTEEEGAVPAEHQVAMAAARALGDVTVLGSLLLQHLLHFS 497
Query: 518 SEFIQPYVTSITSMEADHVLEAAKDAAGARVIEAYLSS-KVSAKQKHRVVLKLKGHFGEL 576
+ + + S+ ++ +L A+ AG+ V++A L+S V+ K + RV+ LKG + L
Sbjct: 498 TPGL--VLRSLGALTGPQLLSLAQSPAGSHVLDAILTSPSVTRKLRRRVLQNLKGQYVAL 555
Query: 577 SVHPSGSFTVERCFTASSLSLRETIASELSAVRNELSKTKQGPHLIRKLDIDGFTARPDQ 636
+ GS ++ ++ ++L R+ IA+EL EL + G H+ R + + F R +
Sbjct: 556 ACSRHGSRVLDAIWSGAALRARKEIAAELGEQNQELIRDPFGHHVARNVALTTFLKRREA 615
Query: 637 WRLKQSA 643
W +Q A
Sbjct: 616 WEQQQGA 622
>FB|FBgn0033169 [details] [associations]
symbol:CG11123 species:7227 "Drosophila melanogaster"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 EMBL:AE013599
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
KO:K14790 eggNOG:NOG276912 GeneTree:ENSGT00390000004964
EMBL:AY094923 RefSeq:NP_610276.1 UniGene:Dm.11790 STRING:Q7JX95
EnsemblMetazoa:FBtr0088971 GeneID:35664 KEGG:dme:Dmel_CG11123
UCSC:CG11123-RA FlyBase:FBgn0033169 InParanoid:Q7JX95 OMA:FINILDA
OrthoDB:EOG4ZGMTC GenomeRNAi:35664 NextBio:794621 Uniprot:Q7JX95
Length = 665
Score = 260 (96.6 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 76/290 (26%), Positives = 137/290 (47%)
Query: 366 LMEVILEVAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALIWEELG 425
L+E I+ VA L +++ +F N + L+ NF VQ L+ H ++ ++ EL
Sbjct: 366 LLETIMSVAGAKLMIQLYAMLFCNRIGYLARQPGTNFSVQRLLQHIKEVPDFESVFTELQ 425
Query: 426 GKFRELLEMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCIVPGILFLESY 485
ELL+MG +GVV+AL AA RL T + + AL +A+ + + LFL
Sbjct: 426 PHVEELLKMGYTGVVSALSAACLRLATKQSQMIAALQSALHVSGDKEK----SKLFLTCL 481
Query: 486 FSCEDKSNWNWPKGIKIQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLEAAKDAAG 545
+ + + + GSLI Q + +F V I + A + + G
Sbjct: 482 IKLKPFEVVTGDESAFVHLHGSLITQHLLQFNKPIF--LVNCILDLPATQLAQVFNTPNG 539
Query: 546 ARVIEAYLSSK-VSAKQKHRVVLKLKGHFGELSVHPSGSFTVERCFTASSLSLRETIASE 604
+ +++A++ SK + K + R++ +L G + +L++ GS E+CF A+ + + +A E
Sbjct: 540 SHIVDAFMQSKFIGEKSRERLIRQLDGFYVDLAITRHGSRVFEQCFKAAQDAQKLRMAKE 599
Query: 605 LSAVRNELSKTKQGPHLIRKLDIDGFTARPDQWRLKQSAKQLTYKEFYST 654
L + N L + G + K +D + P QW+ + +K L ++ T
Sbjct: 600 LFSKANMLKGSPHGRIIYTKYRLDTYKLSPTQWQ-ESLSKHLDAEQTKET 648
Score = 111 (44.1 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 93 VDPDLAKYFAEISNLFESNEVDLEERSVLCRNALEETRGKELELATDYIISHTLQTLLEG 152
+D + YF I + + D+EER ++ N E+T +E+ LA++ I+S L++L+
Sbjct: 38 IDDEQFNYFINILDAMKVGFEDVEERVIMANNVFEQTHDQEIHLASNQIVSKALESLVGF 97
Query: 153 CDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALK 187
D L F + DR SHV + L+
Sbjct: 98 VDDVQLERFFSKFGDNLRPMCSDRFASHVLQKMLE 132
Score = 69 (29.3 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 29/109 (26%), Positives = 50/109 (45%)
Query: 136 LATDYIISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSHVA---ETALKSLAMH 192
+ +D SH LQ +LE +FLRG K D + ++ + A + +
Sbjct: 117 MCSDRFASHVLQKMLE-------IAFLRGVGKSAAQDTSDAASANKKAKPDAAQEEEEYN 169
Query: 193 LQ----DEHAHSIIEETLKSICKVIVANPVDVMCNCYGSHVLRS-LLCL 236
LQ D+H + L+ I K ++ N D + + SH++R+ +LCL
Sbjct: 170 LQADFTDDHREKCRQFVLR-ISKFMLNNLEDFVWDACASHIMRTAILCL 217
Score = 39 (18.8 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 297 DLRTLQTDQYSSLVLQTALRL--LVGNDPELLQIISILLGSNK 337
+LR + +D+++S VLQ L + L G Q S +NK
Sbjct: 113 NLRPMCSDRFASHVLQKMLEIAFLRGVGKSAAQDTSDAASANK 155
>ASPGD|ASPL0000071747 [details] [associations]
symbol:AN10618 species:162425 "Emericella nidulans"
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000056 "ribosomal small subunit export from nucleus"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030688 "preribosome, small subunit precursor"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 PROSITE:PS50302 SMART:SM00025
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:BN001303 EMBL:AACD01000084 GO:GO:0006364
KO:K14790 RefSeq:XP_662489.1 STRING:Q5B3J5 GeneID:2872681
KEGG:ani:AN4885.2 eggNOG:NOG276912 HOGENOM:HOG000197492 OMA:ERDLMVH
OrthoDB:EOG486CMN Uniprot:Q5B3J5
Length = 699
Score = 246 (91.7 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
Identities = 118/528 (22%), Positives = 223/528 (42%)
Query: 142 ISHTLQTLLEGCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLAMHLQDEHAHSI 201
I H L TL++ H C L A P + S + + + M +E +
Sbjct: 153 IGHFL-TLVQHRFASHCCERLFISAA--PGVTQKASKTKSKKD--DDIEMDEDEEPEPEL 207
Query: 202 -IEETLKSICKVIVANPVDVMCNCYGSHVLRSLLCLCRGAPLDSSDFHRAKPSQILAERL 260
+ E + + + N ++ + SH +R LL + G P+D S S+ ERL
Sbjct: 208 PLAEMFMKVVEELQGNWGYLLTERFASHTIRVLLLVLAGEPVDVSSNDSVVASR-KKERL 266
Query: 261 NLDASQSNRNNLSYHHPVFSELSKFLISGIL---ASSRKD--LRTLQTDQYSSLVLQTAL 315
+ ++ NN S E + + ++ S D LR L T + VLQ +
Sbjct: 267 GVVGGETQENNPSGEKRSVPESFEATLKKVMQDMVSVLDDTYLRALATHPVGNPVLQVLV 326
Query: 316 RLLVGN--DPELLQIISILLGSNKDNVVEGNFIPMT-VVHDVLNLMKETAYSHLMEVILE 372
RL + + Q SI+ K + + NF + + L+ + S L+E ++
Sbjct: 327 RLELSHFGKSSAKQPTSII----KRLIPDENFEDDSETTRFIRGLLYDPVGSRLLETMVR 382
Query: 373 VAPQSLYDEMFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALIWEELGGKFRELL 432
P ++ ++ R+ + L+ + A +VV ++ +D + + E++ K L+
Sbjct: 383 CMPGKMFKSLYRNYLRDQMSSLARNQTAGYVVLRVLERL-GRDDLHAVMEQIVPKIPSLI 441
Query: 433 EMGRSGVVAALIAASQRLHTHERKCCEALAAAVSSTNVSPRCIVPGILFLESYFSC-EDK 491
E R+ V LI + +AL ++ S P + +L LE+ + ++K
Sbjct: 442 ERSRTIVPKVLIERCLARGVDTKPIAKALESSYDS---DPARRLEQMLRLETAMADNKEK 498
Query: 492 SNWNWPKG-------IKIQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLEAAKDAA 544
S+ N P G ++ GSL+ Q + P + + +S+ ++ + +L KD
Sbjct: 499 SDKNGPPGESNPGSAAAEKLHGSLLAQTIVTAPGQLSELVFSSLLALSPEVLLSICKDPT 558
Query: 545 GARVIEAYLSSKVSAKQ-KHRVVLKLKGHFGELSVHPSGSFTVERCFTASS--LSLRETI 601
+RVI+ L+S S+ Q + + + H EL++ SGS V+ + A+ ++E +
Sbjct: 559 ASRVIQQALTSPASSPQFRRQFTTRFTSHMNELALDSSGSHVVDALWPATKDIYFIKERM 618
Query: 602 ASELSAVRNELSKTKQ--GPHLIRKLDIDGFTARPDQWRLKQSAKQLT 647
A EL+ +NEL+ G + R +D + R +W K + +T
Sbjct: 619 AQELA--QNELALRDSFVGRAVWRNWAMDLYKRRRGEWAAKAKGRDIT 664
Score = 102 (41.0 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 93 VDPDLAKYFAEISNLFESNEV-DLEERSVLCRNALEETRGKELELATDYIISHTLQTLLE 151
+D + +YF+ + + E N+ D EER + + E RGKEL++A S ++ L+
Sbjct: 79 LDSEEQEYFSRANEMLELNQFGDAEERRLFVDSVFREARGKELKIACSQSCSRLMEKLIS 138
Query: 152 GCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLA 190
D+ + F + R SH E S A
Sbjct: 139 VSDIHQIWRLFNKFIGHFLTLVQHRFASHCCERLFISAA 177
>POMBASE|SPAC6G9.02c [details] [associations]
symbol:nop9 "RNA-binding protein Nop9 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] InterPro:IPR001313 InterPro:IPR016024 PROSITE:PS50302
SMART:SM00025 PomBase:SPAC6G9.02c EMBL:CU329670 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CU329670_GR GO:GO:0003723 GO:GO:0006364 KO:K14790
eggNOG:NOG276912 OMA:ERDLMVH PIR:T39064 RefSeq:NP_594111.1
ProteinModelPortal:Q92347 STRING:Q92347 EnsemblFungi:SPAC6G9.02c.1
GeneID:2542044 KEGG:spo:SPAC6G9.02c OrthoDB:EOG4JQ75V
NextBio:20803121 Uniprot:Q92347
Length = 655
Score = 218 (81.8 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 122/614 (19%), Positives = 250/614 (40%)
Query: 93 VDPDLAKYFAEISNLFESNEV-DLEERSVLCRNALEETRGKELELATDYIISHTLQTLLE 151
+DP+ KYF + F ++ + E+ + E +GKEL + + S L+ L
Sbjct: 60 LDPEEEKYFQQAEQAFANHFTRENEDTRFFVDSIYREVQGKELIVCNNVFGSKVLEKLFP 119
Query: 152 GCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETALKSLA--MHLQDEHAHSIIEETLKSI 209
+ SF + + GS+ E L +A ++L+ + ++ L+
Sbjct: 120 LSTSRQIKSFFSALNGHYVELIQTTFGSYAFEKLLSHMAAILNLETQGVTEDQDDVLEGE 179
Query: 210 CKVIVANPVDVMCNCYGSHVLRSLLCLCRGAPLDSSDFHRAKPSQILAERLNLDASQSNR 269
+ + ++ Y +R + + L H +L + NR
Sbjct: 180 NENVFMTAETLLMYMYNE--IRPEVSMLMSHKLA---VHVLGKIFLLLDGYRFVYHDGNR 234
Query: 270 NNL-SYHHPV-FSELSKFLISGILAS-SRKDLRTLQTDQYSSLVLQTALRLLVGNDPELL 326
+ S P F + + +I + +LR D+Y+S +++ +R+ +
Sbjct: 235 TTMESISVPESFPQFAYSIIDSATDNLDTPELRAYCVDKYASQIMRAFIRIDFERSKKTK 294
Query: 327 Q-----IISILLGSNKDNVVEGNFIPMTVVHDVLNLMKETAYSHLMEVILEVAPQSLYDE 381
+ ++S LL SN+ ++ E F+ L+K+ S ++EVI+E S +
Sbjct: 295 KKHDPRLVSKLLLSNEYDLKELPFME--------TLLKDETGSRILEVIVENMSAS-HLL 345
Query: 382 MFTKVFRNSLFDLSSHHCANFVVQALVSHARDQDQMALIWEELGGKFRELLEMGRSGVVA 441
F VF + L H ANF++Q + + ++ + +EL ++ V+
Sbjct: 346 RFYAVFEGRFYRLCVHPIANFIMQRYIRRL-GRKEIGSVIDELKKNTDNIIRKSFLPVLR 404
Query: 442 ALIAASQRLHTHERKCCEALAAAVSSTNVSPRCIVPGILFLESYFSCEDKSN-WNWPKGI 500
L+ S LH ++ + +V+++ I+P +L S DK+N N + +
Sbjct: 405 TLLEKSNHLHCYQDDIFSMIQTSVTNSGKDAN-IIPCLL--RSKHK-RDKANPENKERKL 460
Query: 501 KIQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLEAAKDAAGARVIEAYLS-SKVSA 559
++G+ +L+ + + IQ + S+ + + +LE + + +IE L S ++
Sbjct: 461 VNNLLGAQLLEEMLHCEKQHIQLLLDSVLDLSKEQILEYCLETVSSHLIEGILDLSDLNP 520
Query: 560 KQKHRVVLKLKGHFGELSVHPSGSFTVERCFTAS-SLSLRET-IASELSAVRNELSKTKQ 617
+ + L G F L+V GS V++ + A+ +L L T I EL+ +++
Sbjct: 521 VFLKKFLNILSGSFATLAVSAPGSHIVDKAWKATRALPLYRTRIVRELAEGGDDVKFDFY 580
Query: 618 GPHLIRKLDIDGFTARPDQWR--LKQSAKQLTYKEFYSTFGSNDTKSSRKDSFLADSSKQ 675
G + ++ F PD+W +KQ E +G + SS L + +
Sbjct: 581 GKKVCSNWKVELFRRAPDEWYRFMKQDEPSKRVHERARQYGRIVSGSSANTQPLGEK-RS 639
Query: 676 TSNSQGIKNMRKEI 689
T N + +++ K +
Sbjct: 640 TENDEELESGPKRV 653
>SGD|S000003547 [details] [associations]
symbol:NOP9 "Essential subunit of U3-containing 90S
preribosome" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0000472 "endonucleolytic cleavage
to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA;IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0000056 "ribosomal small subunit
export from nucleus" evidence=IMP] [GO:0030688 "preribosome, small
subunit precursor" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SGD:S000003547 SUPFAM:SSF48371 GO:GO:0005730
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:BK006943 GO:GO:0003723
GO:GO:0000056 GO:GO:0030686 GO:GO:0000447 GO:GO:0000472 KO:K01768
RefSeq:NP_012529.3 GeneID:853452 KEGG:sce:YJL005W GO:GO:0000480
GO:GO:0030688 RefSeq:NP_012524.3 GeneID:853445 KEGG:sce:YJL010C
KO:K14790 eggNOG:NOG276912 OMA:ERDLMVH GeneTree:ENSGT00390000004964
OrthoDB:EOG4JQ75V EMBL:Z49285 PIR:S56781 ProteinModelPortal:P47077
SMR:P47077 DIP:DIP-5668N IntAct:P47077 MINT:MINT-498143
STRING:P47077 PaxDb:P47077 PeptideAtlas:P47077 EnsemblFungi:YJL010C
CYGD:YJL010c NextBio:974001 Genevestigator:P47077
GermOnline:YJL010C Uniprot:P47077
Length = 666
Score = 118 (46.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 48/202 (23%), Positives = 91/202 (45%)
Query: 93 VDPDLAKYFAEISNLFESNEVDL-EERSVLCRNALEETRGKELELATDYIISHTLQTLLE 151
+D + +YF + + + + + EE+ + +EE +GKEL+L T I S ++ ++
Sbjct: 56 LDREELEYFKQAESTLQLDAFEAPEEKFQFVTSIIEEAKGKELKLVTSQITSKLMERVIL 115
Query: 152 GCDVDHLCSFLRGCAKVFPAIAMDRSGSHVAETA-LKSLAM-----------HLQDEHAH 199
CD L + VF ++ + SHV ET ++S A+ + + E +
Sbjct: 116 ECDETQLKDIFQSFNGVFFGLSCHKYASHVLETLFVRSAALVERELLTPSFDNNEKEGPY 175
Query: 200 SIIEETLKSICKVIVANPVDVMCNCYGSHVLRSLLCLCRGAPLDSS----DFHRAKPSQI 255
+E + + + +M + Y SHVLR L+ + L +S R+K S+I
Sbjct: 176 VTMENMFLFMLNELKPHLKTMMNHQYASHVLRLLILILSSKTLPNSTKANSTLRSKKSKI 235
Query: 256 LAERLNLDASQSNRNNLSYHHP 277
A ++ +D ++ N Y P
Sbjct: 236 -ARKM-IDIKDNDDFNKVYQTP 255
Score = 113 (44.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 91/458 (19%), Positives = 190/458 (41%)
Query: 220 VMCNCYGSHVLRSLLCLCRGAPLDSS----DFHRAKPSQILAERLNLDASQSNRNNLSYH 275
+M + Y SHVLR L+ + L +S R+K S+I A ++ +D ++ N Y
Sbjct: 196 MMNHQYASHVLRLLILILSSKTLPNSTKANSTLRSKKSKI-ARKM-IDIKDNDDFNKVYQ 253
Query: 276 HPV-F-SELSKF---LISGIL--ASSRKDL--------RTLQTDQYSSLVLQTALRL--L 318
P F SEL L G A SR D+ R D+ +S V+Q +++ +
Sbjct: 254 TPESFKSELRDIITTLYKGFTNGAESRSDISQSTITKFREYSVDKVASPVIQLIIQVEGI 313
Query: 319 VGNDPELLQIISILLGSNKDNVVEGNFIPMTVVHDVLNLMKETAYSHLMEVILEVAPQSL 378
D +++ KD E +F+ L+ + SH +E ++ A
Sbjct: 314 FDRDRSFWRLV-FNTADEKDPKEE-SFLEY--------LLSDPVGSHFLENVIGSARLKY 363
Query: 379 YDEMFTKVFRNSLFDLSSHHCAN-FVVQALVSHARDQDQMALIWEELGGKFRELLEMGRS 437
+ ++ ++ + L+ FVV+AL+ H +++D ++ + + + LL
Sbjct: 364 VERLYRLYMKDRIVKLAKRDTTGAFVVRALLEHLKEKDVKQIL-DAVVPELSMLLNSNMD 422
Query: 438 GVVAALIAASQRLHTHERKCCEA-LAAAVSSTNVSPRCIVPGILFLESYFSCEDKSNWNW 496
A+I AS + + R A L + I+ L L + S + +W
Sbjct: 423 -FGTAIINASNKQGGYLRDDVIAQLIQKYYPEKSDAKNILESCLLLSA--STLGNTRDDW 479
Query: 497 PKGIKIQIIGSLILQAVFRFPSEFIQPYVTSITSMEADHVLEAAKDAAGARVIEAYL-SS 555
P + + S+ L+ + + +F+ + S+ ++ + +++ + V+E L ++
Sbjct: 480 PTAEERR--RSVFLEQLIDYDDKFLNITIDSMLALPEERLIQMCYHGVFSHVVEHVLQTT 537
Query: 556 KVSAKQKHRVVLKLKGHFGELSVHPSGSFTVERC--FTASSLSLRETIASELSAVRNELS 613
+V ++ ++ L L+ + GS +++ FTA +E IA L ++
Sbjct: 538 RVDIIKRKMLLNILSKESVNLACNVYGSHIMDKLWEFTAKLTLYKERIARALVLETEKVK 597
Query: 614 KTKQGPHLIRKLDIDGFTARPDQWRLKQSAKQLTYKEF 651
+ G + + ++ + + W K+ K+ ++ F
Sbjct: 598 NSIYGRQVWKNWKLELYVRK--MWDWKKLIKEQEFEIF 633
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 786 737 0.00088 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 620 (66 KB)
Total size of DFA: 361 KB (2180 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.35u 0.11s 64.46t Elapsed: 00:00:03
Total cpu time: 64.36u 0.11s 64.47t Elapsed: 00:00:03
Start: Fri May 10 07:11:14 2013 End: Fri May 10 07:11:17 2013